BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017746
(366 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 140/266 (52%), Gaps = 20/266 (7%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQI 64
D IG GSFG V + + ++A+K D + +++ ++ + + C P I
Sbjct: 25 DRIGKGSFGEV----YKGIDNHTKEVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
R FG S+ K + + +++EY GS D +K G L+E+ + R +LKGL ++
Sbjct: 80 TRYFG---SYLKSTKLW-IIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYL 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HS+ +H DIK NVL+ + + K+ADFG+A + + + F GTP +M+PE + +
Sbjct: 133 HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF--VGTPFWMAPEVIKQ 190
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
+ Y+ DIW+LG +E+A G+P + V L+ + + P + G S+ K+
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPK----NSPPTLEGQHSKPFKE 246
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVC 270
F+ C KDP+ R TA+ LL H F+
Sbjct: 247 FVEACLNKDPRFRPTAKELLKHKFIT 272
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 141/264 (53%), Gaps = 20/264 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
IG GSFG V + + ++A+K D + +++ ++ + + C P + +
Sbjct: 35 IGKGSFGEV----FKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 89
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
+G S+ K + + +++EY GS D ++ G L E+ + R +LKGL ++HS
Sbjct: 90 YYG---SYLKDTKLW-IIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHS 142
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE 186
+ +H DIK NVL+ ++ E K+ADFG+A + + + +F GTP +M+PE + ++
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPEVIKQSA 200
Query: 187 YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFL 246
Y++ DIW+LG +E+A G+P + V L+ + + P + G+ S+ K+F+
Sbjct: 201 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNPPTLEGNYSKPLKEFV 256
Query: 247 IKCFLKDPKRRWTAEMLLNHPFVC 270
C K+P R TA+ LL H F+
Sbjct: 257 EACLNKEPSFRPTAKELLKHKFIL 280
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 141/264 (53%), Gaps = 20/264 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
IG GSFG V + + ++A+K D + +++ ++ + + C P + +
Sbjct: 15 IGKGSFGEV----FKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
+G S+ K + + +++EY GS D ++ G L E+ + R +LKGL ++HS
Sbjct: 70 YYG---SYLKDTKLW-IIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHS 122
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE 186
+ +H DIK NVL+ ++ E K+ADFG+A + + + +F GTP +M+PE + ++
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPEVIKQSA 180
Query: 187 YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFL 246
Y++ DIW+LG +E+A G+P + V L+ + + P + G+ S+ K+F+
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNPPTLEGNYSKPLKEFV 236
Query: 247 IKCFLKDPKRRWTAEMLLNHPFVC 270
C K+P R TA+ LL H F+
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFIL 260
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 140/264 (53%), Gaps = 20/264 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
IG GSFG V + + ++A+K D + +++ ++ + + C P + +
Sbjct: 30 IGKGSFGEV----FKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 84
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
+G S+ K + + +++EY GS D ++ G L E+ + R +LKGL ++HS
Sbjct: 85 YYG---SYLKDTKLW-IIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHS 137
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE 186
+ +H DIK NVL+ ++ E K+ADFG+A + + + F GTP +M+PE + ++
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF--VGTPFWMAPEVIKQSA 195
Query: 187 YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFL 246
Y++ DIW+LG +E+A G+P + V L+ + + P + G+ S+ K+F+
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNPPTLEGNYSKPLKEFV 251
Query: 247 IKCFLKDPKRRWTAEMLLNHPFVC 270
C K+P R TA+ LL H F+
Sbjct: 252 EACLNKEPSFRPTAKELLKHKFIL 275
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 140/264 (53%), Gaps = 20/264 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
IG GSFG V + + ++A+K D + +++ ++ + + C P + +
Sbjct: 15 IGKGSFGEV----FKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYVTK 69
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
+G S+ K + + +++EY GS D ++ G L E+ + R +LKGL ++HS
Sbjct: 70 YYG---SYLKDTKLW-IIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHS 122
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE 186
+ +H DIK NVL+ ++ E K+ADFG+A + + + F GTP +M+PE + ++
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF--VGTPFWMAPEVIKQSA 180
Query: 187 YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFL 246
Y++ DIW+LG +E+A G+P + V L+ + + P + G+ S+ K+F+
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNPPTLEGNYSKPLKEFV 236
Query: 247 IKCFLKDPKRRWTAEMLLNHPFVC 270
C K+P R TA+ LL H F+
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFIL 260
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 31/269 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----PQ 63
+G GS+GSV A + E ++A+K P S + +E + +I I P
Sbjct: 37 LGEGSYGSVYKA----IHKETGQIVAIKQV---PVES----DLQEIIKEISIMQQCDSPH 85
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ +G S+ K + +++EY GS++D ++ +N L E ++ +S LKGL +
Sbjct: 86 VVKYYG---SYFKNTDLW-IVMEYCGAGSVSDIIRLRNK-TLTEDEIATILQSTLKGLEY 140
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+H +H DIK N+L+ AK+ADFG+A ++ GTP +M+PE +
Sbjct: 141 LHFMRKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI---PGDLSE 240
E Y DIW+LG +EMA GKP + +++ + + P P S+
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPPY-----ADIHPMRAIFMIPTNPPPTFRKPELWSD 253
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
DF+ +C +K P++R TA LL HPFV
Sbjct: 254 NFTDFVKQCLVKSPEQRATATQLLQHPFV 282
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 140/268 (52%), Gaps = 20/268 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
IG GSFG V + + ++A+K D + +++ ++ + + C + +
Sbjct: 31 IGKGSFGEV----FKGIDNRTQQVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
+G S+ KG + + +++EY GS D ++ G E + + +LKGL ++HS
Sbjct: 86 YYG---SYLKGSKLW-IIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHS 138
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE 186
+ +H DIK NVL+ + + K+ADFG+A + + + +F GTP +M+PE + ++
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPEVIQQSA 196
Query: 187 YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFL 246
Y++ DIW+LG +E+A G+P + V L+ + + P + GD ++ K+F+
Sbjct: 197 YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK----NNPPTLVGDFTKSFKEFI 252
Query: 247 IKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
C KDP R TA+ LL H F+ + +
Sbjct: 253 DACLNKDPSFRPTAKELLKHKFIVKNSK 280
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 134/273 (49%), Gaps = 26/273 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
+G G+FG K K ++ S++A D S L++ +D + C P IV+
Sbjct: 45 LGDGAFG-----KVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVK 98
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
D + +E +L+E+ + G++ D V + L ES ++ + L L ++H
Sbjct: 99 LL-DAFYYENN---LWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESV---- 182
+H D+K N+L + + K+ADFG++ K++ +R SF GTP +M+PE V
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF--IGTPYWMAPEVVMCET 211
Query: 183 -NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI--PGDLS 239
+ Y+ D+W+LG ++EMA +P + N +L++I E P + P S
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPP---HHELNPMRVLLKIA-KSEPPTLAQPSRWS 267
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
KDFL KC K+ RWT LL HPFV D
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 134/273 (49%), Gaps = 26/273 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
+G G+FG K K ++ S++A D S L++ +D + C P IV+
Sbjct: 45 LGDGAFG-----KVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVK 98
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
D + +E +L+E+ + G++ D V + L ES ++ + L L ++H
Sbjct: 99 LL-DAFYYENN---LWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESV---- 182
+H D+K N+L + + K+ADFG++ K++ +R SF GTP +M+PE V
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF--IGTPYWMAPEVVMCET 211
Query: 183 -NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI--PGDLS 239
+ Y+ D+W+LG ++EMA +P + N +L++I E P + P S
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPP---HHELNPMRVLLKIA-KSEPPTLAQPSRWS 267
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
KDFL KC K+ RWT LL HPFV D
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCAD--CPPSSVTLKNEKEALDQIGICPQI 64
DV+G G+F V LA+ + L+A+K A +++NE L +I P I
Sbjct: 24 DVLGTGAFSEVILAEDKRTQK----LVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNI 78
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V D +E G Y L+++ S G L DR+ ++ G E D R +L ++++
Sbjct: 79 VAL---DDIYESGGHLY-LIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYL 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
H G VH D+K +N+L + DE I+DFGL+K D S C GTP Y++PE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTAC-GTPGYVAPEV 189
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
+ + Y D W++G + G P + + D+ +F +++ + P D+S+
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW-DDISDS 248
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
KDF+ KDP++R+T E L HP++ D
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCAD--CPPSSVTLKNEKEALDQIGICPQI 64
DV+G G+F V LA+ + L+A+K A +++NE L +I P I
Sbjct: 24 DVLGTGAFSEVILAEDKRTQK----LVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNI 78
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V D +E G Y L+++ S G L DR+ ++ G E D R +L ++++
Sbjct: 79 VAL---DDIYESGGHLY-LIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYL 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
H G VH D+K +N+L + DE I+DFGL+K D S C GTP Y++PE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTAC-GTPGYVAPEV 189
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
+ + Y D W++G + G P + + D+ +F +++ + P D+S+
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW-DDISDS 248
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
KDF+ KDP++R+T E L HP++ D
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCAD--CPPSSVTLKNEKEALDQIGICPQI 64
DV+G G+F V LA+ + L+A+K A +++NE L +I P I
Sbjct: 24 DVLGTGAFSEVILAEDKRTQK----LVAIKCIAKKALEGKEGSMENEIAVLHKIK-HPNI 78
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V D +E G Y L+++ S G L DR+ ++ G E D R +L ++++
Sbjct: 79 VAL---DDIYESGGHLY-LIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYL 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
H G VH D+K +N+L + DE I+DFGL+K D S C GTP Y++PE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTAC-GTPGYVAPEV 189
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
+ + Y D W++G + G P + + D+ +F +++ + P D+S+
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW-DDISDS 248
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
KDF+ KDP++R+T E L HP++ D
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 20/271 (7%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCAD--CPPSSVTLKNEKEALDQIGICPQI 64
DV+G G+F V LA+ + L+A+K A +++NE L +I P I
Sbjct: 24 DVLGTGAFSEVILAEDKRTQK----LVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNI 78
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V D +E G Y L+++ S G L DR+ ++ G E D R +L ++++
Sbjct: 79 VAL---DDIYESGGHLY-LIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYL 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
H G VH D+K +N+L + DE I+DFGL+K D S C GTP Y++PE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTAC-GTPGYVAPEV 189
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
+ + Y D W++G + G P + + D+ +F +++ + P D+S+
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW-DDISDS 248
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
KDF+ KDP++R+T E L HP++ D
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 26/273 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
+G G+FG K K ++ S++A D S L++ +D + C P IV+
Sbjct: 45 LGDGAFG-----KVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVK 98
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
D + +E +L+E+ + G++ D V + L ES ++ + L L ++H
Sbjct: 99 LL-DAFYYENN---LWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESV---- 182
+H D+K N+L + + K+ADFG++ K++ +R F GTP +M+PE V
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF--IGTPYWMAPEVVMCET 211
Query: 183 -NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI--PGDLS 239
+ Y+ D+W+LG ++EMA +P + N +L++I E P + P S
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPP---HHELNPMRVLLKIA-KSEPPTLAQPSRWS 267
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
KDFL KC K+ RWT LL HPFV D
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 96 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 149
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F+ +I++ + P + +D
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-----DFPEKFFPKARDL 264
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 7 DVIGH-GSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQ 63
++IG G FG K K ++ S++A D S L++ +D + C P
Sbjct: 15 EIIGELGDFG-----KVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPN 68
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ D + +E +L+E+ + G++ D V + L ES ++ + L L +
Sbjct: 69 IVKLL-DAFYYENN---LWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNY 123
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGL-AKKSSCDGERSQSFECRGTPLYMSPESV 182
+H +H D+K N+L + + K+ADFG+ AK + +R SF GTP +M+PE V
Sbjct: 124 LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSF--IGTPYWMAPEVV 181
Query: 183 -----NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI--P 235
+ Y+ D+W+LG ++EMA +P + N +L++I E P + P
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP---HHELNPMRVLLKIA-KSEPPTLAQP 237
Query: 236 GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
S KDFL KC K+ RWT LL HPFV D
Sbjct: 238 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 274
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 96 KLY---FTFQDDEKLY-FGLSYAKNGCLLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 149
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 210 SASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 264
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 96 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLH 149
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F+ +I++ + P + +D
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-----DFPEKFFPKARDL 264
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 137/284 (48%), Gaps = 24/284 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLA----KASKVSSEFPSL--MAVKSCADCPPSSVTLKNEKEAL 55
E++ +G G+ G V LA KV+ + S A+ S + P+ + ++ E E L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPA-LNVETEIEIL 69
Query: 56 DQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTR 115
++ P I++ +F E +Y ++LE G L D+V N RL+E+ K Y
Sbjct: 70 KKLN-HPCIIKI----KNFFDAEDYY-IVLELMEGGELFDKV--VGNKRLKEATCKLYFY 121
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRG 172
ML ++++H G +H D+K +NVL+ +E KI DFG S GE S G
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG---HSKILGETSLMRTLCG 178
Query: 173 TPLYMSPE---SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGD 229
TP Y++PE SV Y D W+LG + SG P ++ + I G +
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 230 ELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+P + ++SE+ D + K + DPK R+T E L HP++ +D
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 282
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 98
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 99 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 152
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 213 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPAAFFPKARDL 267
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 268 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 296
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 137/284 (48%), Gaps = 24/284 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLA----KASKVSSEFPSL--MAVKSCADCPPSSVTLKNEKEAL 55
E++ +G G+ G V LA KV+ + S A+ S + P+ + ++ E E L
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPA-LNVETEIEIL 75
Query: 56 DQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTR 115
++ P I++ +F E +Y ++LE G L D+V N RL+E+ K Y
Sbjct: 76 KKLN-HPCIIKI----KNFFDAEDYY-IVLELMEGGELFDKV--VGNKRLKEATCKLYFY 127
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRG 172
ML ++++H G +H D+K +NVL+ +E KI DFG S GE S G
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG---HSKILGETSLMRTLCG 184
Query: 173 TPLYMSPE---SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGD 229
TP Y++PE SV Y D W+LG + SG P ++ + I G +
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 244
Query: 230 ELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+P + ++SE+ D + K + DPK R+T E L HP++ +D
Sbjct: 245 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 288
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 137/284 (48%), Gaps = 24/284 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLA----KASKVSSEFPSL--MAVKSCADCPPSSVTLKNEKEAL 55
E++ +G G+ G V LA KV+ + S A+ S + P+ + ++ E E L
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPA-LNVETEIEIL 68
Query: 56 DQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTR 115
++ P I++ +F E +Y ++LE G L D+V N RL+E+ K Y
Sbjct: 69 KKLN-HPCIIKI----KNFFDAEDYY-IVLELMEGGELFDKV--VGNKRLKEATCKLYFY 120
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRG 172
ML ++++H G +H D+K +NVL+ +E KI DFG S GE S G
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG---HSKILGETSLMRTLCG 177
Query: 173 TPLYMSPE---SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGD 229
TP Y++PE SV Y D W+LG + SG P ++ + I G +
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 237
Query: 230 ELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+P + ++SE+ D + K + DPK R+T E L HP++ +D
Sbjct: 238 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 281
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLM------AVKSCADCPPSSVTLKNEKEAL 55
E++ +G G+ G V LA K + + A+ S + P+ + ++ E E L
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPA-LNVETEIEIL 208
Query: 56 DQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTR 115
++ P I++ +F E +Y ++LE G L D+V N RL+E+ K Y
Sbjct: 209 KKLN-HPCIIKI----KNFFDAEDYY-IVLELMEGGELFDKV--VGNKRLKEATCKLYFY 260
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRG 172
ML ++++H G +H D+K +NVL+ +E KI DFG S GE S G
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG---HSKILGETSLMRTLCG 317
Query: 173 TPLYMSPE---SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGD 229
TP Y++PE SV Y D W+LG + SG P ++ + I G +
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 377
Query: 230 ELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
+P + ++SE+ D + K + DPK R+T E L HP++ +D
Sbjct: 378 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM 422
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 137/284 (48%), Gaps = 24/284 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLA----KASKVSSEFPSL--MAVKSCADCPPSSVTLKNEKEAL 55
E++ +G G+ G V LA KV+ + S A+ S + P+ + ++ E E L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPA-LNVETEIEIL 69
Query: 56 DQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTR 115
++ P I++ +F E +Y ++LE G L D+V N RL+E+ K Y
Sbjct: 70 KKLN-HPCIIKI----KNFFDAEDYY-IVLELMEGGELFDKV--VGNKRLKEATCKLYFY 121
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRG 172
ML ++++H G +H D+K +NVL+ +E KI DFG S GE S G
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG---HSKILGETSLMRTLCG 178
Query: 173 TPLYMSPE---SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGD 229
TP Y++PE SV Y D W+LG + SG P ++ + I G +
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 230 ELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+P + ++SE+ D + K + DPK R+T E L HP++ +D
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 282
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 137/284 (48%), Gaps = 24/284 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLA----KASKVSSEFPSL--MAVKSCADCPPSSVTLKNEKEAL 55
E++ +G G+ G V LA KV+ + S A+ S + P+ + ++ E E L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPA-LNVETEIEIL 69
Query: 56 DQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTR 115
++ P I++ +F E +Y ++LE G L D+V N RL+E+ K Y
Sbjct: 70 KKLN-HPCIIKI----KNFFDAEDYY-IVLELMEGGELFDKV--VGNKRLKEATCKLYFY 121
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRG 172
ML ++++H G +H D+K +NVL+ +E KI DFG S GE S G
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG---HSKILGETSLMRTLCG 178
Query: 173 TPLYMSPE---SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGD 229
TP Y++PE SV Y D W+LG + SG P ++ + I G +
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 238
Query: 230 ELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+P + ++SE+ D + K + DPK R+T E L HP++ +D
Sbjct: 239 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 282
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 24/284 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLM------AVKSCADCPPSSVTLKNEKEAL 55
E++ +G G+ G V LA K + + A+ S + P+ + ++ E E L
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPA-LNVETEIEIL 194
Query: 56 DQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTR 115
++ P I++ +F E +Y ++LE G L D+V N RL+E+ K Y
Sbjct: 195 KKLN-HPCIIKI----KNFFDAEDYY-IVLELMEGGELFDKV--VGNKRLKEATCKLYFY 246
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRG 172
ML ++++H G +H D+K +NVL+ +E KI DFG S GE S G
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG---HSKILGETSLMRTLCG 303
Query: 173 TPLYMSPE---SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGD 229
TP Y++PE SV Y D W+LG + SG P ++ + I G +
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN 363
Query: 230 ELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+P + ++SE+ D + K + DPK R+T E L HP++ +D
Sbjct: 364 FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 407
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 71
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 72 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 125
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 240
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 241 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 269
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 73
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 74 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 127
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 242
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 243 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 271
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 72
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 73 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 126
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 241
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 242 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 270
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 70
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 71 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 124
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 239
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 240 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 268
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 92
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 93 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 146
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 261
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 262 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 290
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 77
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 78 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 131
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 246
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 247 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 275
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 96 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 149
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 264
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 92
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 93 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 146
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 261
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 262 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 290
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 96 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 149
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 264
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 96
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 97 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 150
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 265
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 266 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 294
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 93
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 94 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 147
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 262
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 96
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 97 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 150
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 265
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 266 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 294
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 96 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 149
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 264
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 293
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 93
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 94 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 147
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 262
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 93
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 94 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 147
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 262
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 13/270 (4%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G+++G GSF V A++ E M K ++NE + Q+ P I+
Sbjct: 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HPSIL 74
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
Y++ + + L+LE G + +R K E++ + + ++ G+ ++H
Sbjct: 75 EL----YNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
S G +H D+ L N+L+ N KIADFGLA + E+ + C GTP Y+SPE +
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL-C-GTPNYISPEIATRS 187
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ D+W+LGC + G+P ++ N + ++ + D +P LS + KD
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN---KVVLADY--EMPSFLSIEAKDL 242
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFVCADDQT 275
+ + ++P R + +L+HPF+ + T
Sbjct: 243 IHQLLRRNPADRLSLSSVLDHPFMSRNSST 272
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 137/266 (51%), Gaps = 16/266 (6%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G G++G V + +S++ +A+K + +E+ AL + IV+
Sbjct: 15 VLGKGTYGIVYAGR--DLSNQV--RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVK-KQNNGRLQESDVKRYTRSMLKGLRHIHS 126
G SF + F + +E GSL+ ++ K + E + YT+ +L+GL+++H
Sbjct: 71 LG---SFSE-NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 127 KGFVHCDIKLQNVLVFDNDEA-KIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
VH DIK NVL+ KI+DFG +K+ + +++F GT YM+PE +++
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKG 184
Query: 186 E--YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y DIW+LGC ++EMA+GKP + + + + ++G+ P IP +S + K
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ--AAMFKVGMFKVHPEIPESMSAEAK 242
Query: 244 DFLIKCFLKDPKRRWTAEMLLNHPFV 269
F++KCF DP +R A LL F+
Sbjct: 243 AFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 8/194 (4%)
Query: 80 FYNLLLEYASRGSLADRVK-KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQN 138
F + +E GSL+ ++ K + E + YT+ +L+GL+++H VH DIK N
Sbjct: 93 FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDN 152
Query: 139 VLVFDNDEA-KIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE--YEAPCDIWA 195
VL+ KI+DFG +K+ + +++F GT YM+PE +++ Y DIW+
Sbjct: 153 VLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKGPRGYGKAADIWS 210
Query: 196 LGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPK 255
LGC ++EMA+GKP + + + + ++G+ P IP +S + K F++KCF DP
Sbjct: 211 LGCTIIEMATGKPPFYELGEPQ--AAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPD 268
Query: 256 RRWTAEMLLNHPFV 269
+R A LL F+
Sbjct: 269 KRACANDLLVDEFL 282
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 24/273 (8%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQI-- 64
+ +G G+F V LA+ L AVK C P E ++I + +I
Sbjct: 28 ETLGTGAFSEVVLAEEKATGK----LFAVK----CIPKKALKGKESSIENEIAVLRKIKH 79
Query: 65 --VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
+ D Y E Y L+++ S G L DR+ ++ G E D R +L +
Sbjct: 80 ENIVALEDIY--ESPNHLY-LVMQLVSGGELFDRIVEK--GFYTEKDASTLIRQVLDAVY 134
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAK---IADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
++H G VH D+K +N+L + DE I+DFGL+K +G+ GTP Y++P
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK---MEGKGDVMSTACGTPGYVAP 191
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + + Y D W++G + G P + + DS +F +++ + P D+S
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSP-YWDDIS 250
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ KDF+ KDP +R+T E HP++ D
Sbjct: 251 DSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGD 283
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 21/273 (7%)
Query: 8 VIGHGSFGSVNLAK--ASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
V+G GSFG V L K + + + ++ +K V K E++ L ++ P IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFIV 89
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ Y+F+ + Y L+L++ G L R+ K+ E DVK Y + L H+H
Sbjct: 90 KL---HYAFQTEGKLY-LILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLH 143
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
S G ++ D+K +N+L+ + K+ DFGL+K+S +++ SF C GT YM+PE VN
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-C-GTVEYMAPEVVNRR 201
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ D W+ G + EM +G + K +++++ +G +P LS + +
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-----MPQFLSPEAQSL 256
Query: 246 LIKCFLKDPKRRWTA-----EMLLNHPFVCADD 273
L F ++P R A E + H F D
Sbjct: 257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 25/275 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSS----EFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
V+G GSFG V L K K+S + ++ +K V K E++ L ++ P
Sbjct: 32 VLGQGSFGKVFLVK--KISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPF 88
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ Y+F+ + Y L+L++ G L R+ K+ E DVK Y + L H
Sbjct: 89 IVKL---HYAFQTEGKLY-LILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDH 142
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS G ++ D+K +N+L+ + K+ DFGL+K+S +++ SF C GT YM+PE VN
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-C-GTVEYMAPEVVN 200
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
+ D W+ G + EM +G + K +++++ +G +P LS + +
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-----MPQFLSPEAQ 255
Query: 244 DFLIKCFLKDPKRRWTA-----EMLLNHPFVCADD 273
L F ++P R A E + H F D
Sbjct: 256 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 290
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 131/273 (47%), Gaps = 21/273 (7%)
Query: 8 VIGHGSFGSVNLAK--ASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
V+G GSFG V L K + + + ++ +K V K E++ L ++ P IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFIV 89
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ Y+F+ + Y L+L++ G L R+ K+ E DVK Y + L H+H
Sbjct: 90 KL---HYAFQTEGKLY-LILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLH 143
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
S G ++ D+K +N+L+ + K+ DFGL+K+S +++ SF C GT YM+PE VN
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF-C-GTVEYMAPEVVNRR 201
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ D W+ G + EM +G + K +++++ +G +P LS + +
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG-----MPQFLSPEAQSL 256
Query: 246 LIKCFLKDPKRRWTA-----EMLLNHPFVCADD 273
L F ++P R A E + H F D
Sbjct: 257 LRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 111/198 (56%), Gaps = 10/198 (5%)
Query: 73 SFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHC 132
S+ GE + +L+E+ G+L D V + RL E + ++L+ L ++H++G +H
Sbjct: 110 SYLVGEELW-VLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 133 DIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCD 192
DIK ++L+ + K++DFG + S D + + GTP +M+PE ++ + Y D
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV--GTPYWMAPEVISRSLYATEVD 223
Query: 193 IWALGCAVVEMASGKPAWNHKQDSNVFSL-LIRIGVGDELPNIPGDLSEQGKDFLIKCFL 251
IW+LG V+EM G+P + DS V ++ +R +L N +S +DFL + +
Sbjct: 224 IWSLGIMVIEMVDGEPPYF--SDSPVQAMKRLRDSPPPKLKN-SHKVSPVLRDFLERMLV 280
Query: 252 KDPKRRWTAEMLLNHPFV 269
+DP+ R TA+ LL+HPF+
Sbjct: 281 RDPQERATAQELLDHPFL 298
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 26/275 (9%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR 66
+++G+G++G V + K L A+K +K E L + I
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQ----LAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 67 CFGDDYSFEKG------ERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
+G +F K ++ + L++E+ GS+ D +K L+E + R +L+G
Sbjct: 86 YYG---AFIKKNPPGMDDQLW-LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L H+H +H DIK QNVL+ +N E K+ DFG++ + R +F GTP +M+PE
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF--IGTPYWMAPE 199
Query: 181 SV--NEN---EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIP 235
+ +EN Y+ D+W+LG +EMA G P L+ R + P +
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR----NPAPRLK 255
Query: 236 G-DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S++ + F+ C +K+ +R E L+ HPF+
Sbjct: 256 SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 128/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF +V LA+ S E+ + K + E++ + ++ P V
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 100
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + + F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 101 KLY---FCFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 154
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 269
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 270 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 298
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 128/269 (47%), Gaps = 18/269 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G ++G GSF + LA+ S E+ + K + E++ + ++ P V
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 93
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ + ++F+ E+ Y L YA G L ++K G E+ + YT ++ L ++H
Sbjct: 94 KLY---FTFQDDEKLY-FGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLH 147
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
KG +H D+K +N+L+ ++ +I DFG AK S + +++++ GT Y+SPE + E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
D+WALGC + ++ +G P + + +F +I++ + P + +D
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEY-----DFPEKFFPKARDL 262
Query: 246 LIKCFLKDPKRRWTAEM------LLNHPF 268
+ K + D +R E L HPF
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPF 291
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 21/273 (7%)
Query: 8 VIGHGSFGSVNLAKASKV--SSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
V+G GSFG V L + S ++ +K V K E++ L + P +V
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN-HPFVV 93
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ Y+F+ + Y L+L++ G L R+ K+ E DVK Y + GL H+H
Sbjct: 94 KL---HYAFQTEGKLY-LILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALGLDHLH 147
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
S G ++ D+K +N+L+ + K+ DFGL+K++ +++ SF C GT YM+PE VN
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF-C-GTVEYMAPEVVNRQ 205
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ D W+ G + EM +G + K +L+++ +G +P LS + +
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLG-----MPQFLSTEAQSL 260
Query: 246 LIKCFLKDPKRRW-----TAEMLLNHPFVCADD 273
L F ++P R AE + H F D
Sbjct: 261 LRALFKRNPANRLGSGPDGAEEIKRHVFYSTID 293
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 26/272 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
+G G+FG V AK + E +L A K S L++ ++ + C P IV+
Sbjct: 19 LGDGAFGKVYKAK----NKETGALAAAKVIET--KSEEELEDYIVEIEILATCDHPYIVK 72
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
G Y G+ + +++E+ G++ D + + + L E ++ R ML+ L +HS
Sbjct: 73 LLGAYY--HDGKLW--IMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESV---- 182
K +H D+K NVL+ + ++ADFG++ K+ ++ SF GTP +M+PE V
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF--IGTPYWMAPEVVMCET 185
Query: 183 -NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI--PGDLS 239
+ Y+ DIW+LG ++EMA +P + N +L++I D P + P S
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPP---HHELNPMRVLLKIAKSDP-PTLLTPSKWS 241
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
+ +DFL K+P+ R +A LL HPFV +
Sbjct: 242 VEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 273
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 131/266 (49%), Gaps = 18/266 (6%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR 66
+V+G G+F V L K +++ + +L +K SS L+NE L +I + +
Sbjct: 15 EVLGSGAFSEVFLVK-QRLTGKLFALKCIKKSPAFRDSS--LENEIAVLKKIK--HENIV 69
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
D Y + Y L+++ S G L DR+ ++ G E D + +L ++++H
Sbjct: 70 TLEDIY---ESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHE 124
Query: 127 KGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
G VH D+K +N+L +N + I DFGL+K +G S + C GTP Y++PE +
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ-NGIMSTA--C-GTPGYVAPEVLA 180
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
+ Y D W++G + G P + + +S +F I+ G + D+SE K
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEK-IKEGYYEFESPFWDDISESAK 239
Query: 244 DFLIKCFLKDPKRRWTAEMLLNHPFV 269
DF+ KDP R+T E L+HP++
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 26/272 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
+G G+FG V AK + E +L A K S L++ ++ + C P IV+
Sbjct: 27 LGDGAFGKVYKAK----NKETGALAAAKVIET--KSEEELEDYIVEIEILATCDHPYIVK 80
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
G Y G+ + +++E+ G++ D + + + L E ++ R ML+ L +HS
Sbjct: 81 LLGAYY--HDGKLW--IMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESV---- 182
K +H D+K NVL+ + ++ADFG++ K+ ++ SF GTP +M+PE V
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF--IGTPYWMAPEVVMCET 193
Query: 183 -NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI--PGDLS 239
+ Y+ DIW+LG ++EMA +P + N +L++I D P + P S
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPP---HHELNPMRVLLKIAKSDP-PTLLTPSKWS 249
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
+ +DFL K+P+ R +A LL HPFV +
Sbjct: 250 VEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 71 DYSFEKGERFYN---------LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
DY E YN +++E+ G+L D V + R+ E + ++L+ L
Sbjct: 84 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 140
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
+H++G +H DIK ++L+ + K++DFG + S + R + GTP +M+PE
Sbjct: 141 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPEL 198
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
++ Y DIW+LG V+EM G+P + ++ +IR + L N+ +S
Sbjct: 199 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPRLKNL-HKVSPS 256
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
K FL + ++DP +R TA LL HPF+
Sbjct: 257 LKGFLDRLLVRDPAQRATAAELLKHPFLA 285
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 71 DYSFEKGERFYN---------LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
DY E YN +++E+ G+L D V + R+ E + ++L+ L
Sbjct: 82 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 138
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
+H++G +H DIK ++L+ + K++DFG + S + R + GTP +M+PE
Sbjct: 139 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPEL 196
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
++ Y DIW+LG V+EM G+P + ++ +IR + L N+ +S
Sbjct: 197 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPRLKNL-HKVSPS 254
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
K FL + ++DP +R TA LL HPF+
Sbjct: 255 LKGFLDRLLVRDPAQRATAAELLKHPFLA 283
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 71 DYSFEKGERFYN---------LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
DY E YN +++E+ G+L D V + R+ E + ++L+ L
Sbjct: 204 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 260
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
+H++G +H DIK ++L+ + K++DFG + S + R + GTP +M+PE
Sbjct: 261 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPEL 318
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
++ Y DIW+LG V+EM G+P + ++ +IR + L N+ +S
Sbjct: 319 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPRLKNL-HKVSPS 376
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
K FL + ++DP +R TA LL HPF+
Sbjct: 377 LKGFLDRLLVRDPAQRATAAELLKHPFLA 405
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 71 DYSFEKGERFYN---------LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
DY E YN +++E+ G+L D V + R+ E + ++L+ L
Sbjct: 77 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 133
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
+H++G +H DIK ++L+ + K++DFG + S + R + GTP +M+PE
Sbjct: 134 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPEL 191
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
++ Y DIW+LG V+EM G+P + ++ +IR + L N+ +S
Sbjct: 192 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPRLKNL-HKVSPS 249
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
K FL + ++DP +R TA LL HPF+
Sbjct: 250 LKGFLDRLLVRDPAQRATAAELLKHPFLA 278
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 71 DYSFEKGERFYN---------LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
DY E YN +++E+ G+L D V + R+ E + ++L+ L
Sbjct: 73 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 129
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
+H++G +H DIK ++L+ + K++DFG + S + R + GTP +M+PE
Sbjct: 130 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPEL 187
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
++ Y DIW+LG V+EM G+P + ++ +IR + L N+ +S
Sbjct: 188 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPRLKNL-HKVSPS 245
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
K FL + ++DP +R TA LL HPF+
Sbjct: 246 LKGFLDRLLVRDPAQRATAAELLKHPFLA 274
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 71 DYSFEKGERFYN---------LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
DY E YN +++E+ G+L D V + R+ E + ++L+ L
Sbjct: 127 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQAL 183
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
+H++G +H DIK ++L+ + K++DFG + S + R + GTP +M+PE
Sbjct: 184 SVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV--GTPYWMAPEL 241
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
++ Y DIW+LG V+EM G+P + ++ +IR + L N+ +S
Sbjct: 242 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPRLKNL-HKVSPS 299
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
K FL + ++DP +R TA LL HPF+
Sbjct: 300 LKGFLDRLLVRDPAQRATAAELLKHPFLA 328
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 15/251 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVR 66
++G GSFG V LA+ K +++F ++ A+K V EK L P +
Sbjct: 25 MLGKGSFGKVFLAEFKK-TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
F +F+ E + ++EY + G L + Q+ + S Y ++ GL+ +HS
Sbjct: 84 MFC---TFQTKENLF-FVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE 186
KG V+ D+KL N+L+ + KIADFG+ K++ ++ F C GTP Y++PE + +
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEF-C-GTPDYIAPEILLGQK 195
Query: 187 YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFL 246
Y D W+ G + EM G+ + H QD IR+ + P P L ++ KD L
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELFHSIRM----DNPFYPRWLEKEAKDLL 250
Query: 247 IKCFLKDPKRR 257
+K F+++P++R
Sbjct: 251 VKLFVREPEKR 261
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 130/257 (50%), Gaps = 15/257 (5%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGI 60
+++ ++G GSFG V LA+ K +++F ++ A+K V EK L
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKK-TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P + F +F+ E + ++EY + G L + Q+ + S Y ++ G
Sbjct: 77 HPFLTHMFC---TFQTKENLF-FVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILG 130
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L+ +HSKG V+ D+KL N+L+ + KIADFG+ K++ ++ F C GTP Y++PE
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF-C-GTPDYIAPE 188
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
+ +Y D W+ G + EM G+ + H QD IR+ + P P L +
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPF-HGQDEEELFHSIRM----DNPFYPRWLEK 243
Query: 241 QGKDFLIKCFLKDPKRR 257
+ KD L+K F+++P++R
Sbjct: 244 EAKDLLVKLFVREPEKR 260
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 131/256 (51%), Gaps = 14/256 (5%)
Query: 8 VIGHGSFGSVNLAK--ASKVSSEFPSLMAVKSCADCPPSSVT--LKNEKEALDQIGICPQ 63
V+G G++G V L + + + + ++ +K + T + E++ L+ I P
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V Y+F+ + + L+L+Y + G L + ++ R E +V+ Y ++ L H
Sbjct: 121 LVTL---HYAFQTETKLH-LILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEH 174
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESV- 182
+H G ++ DIKL+N+L+ N + DFGL+K+ D E ++++ GT YM+P+ V
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD-ETERAYDFCGTIEYMAPDIVR 233
Query: 183 -NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
++ ++ D W+LG + E+ +G + + N + + R + E P P ++S
Sbjct: 234 GGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSAL 292
Query: 242 GKDFLIKCFLKDPKRR 257
KD + + +KDPK+R
Sbjct: 293 AKDLIQRLLMKDPKKR 308
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 14 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 72 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 125
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG SC S+ GT Y+ PE +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SCHAPSSRRTTLSGTLDYLPPEMIEG 181
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 236
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 18 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA RG + ++K + + E Y + L +
Sbjct: 76 LRLYG---YFHDATRVY-LILEYAPRGEVYKELQKLS--KFDEQRTATYITELANALSYC 129
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLXGTLDYLPPEMIEG 185
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 240
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 22/274 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
+++R IG GSFG L K+++ ++ + S ++ K +E+ ++ +
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQY-------VIKEINISRMSSKEREESRREVAVL 77
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P IV+ SFE+ Y ++++Y G L R+ Q QE + +
Sbjct: 78 ANMKHPNIVQY---RESFEENGSLY-IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ 133
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
+ L+H+H + +H DIK QN+ + + ++ DFG+A+ + E +++ C GTP Y
Sbjct: 134 ICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGTPYY 191
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+SPE Y DIWALGC + E+ + K A+ N L+++I + P +
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN---LVLKI-ISGSFPPVSL 247
Query: 237 DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + + + F ++P+ R + +L F+
Sbjct: 248 HYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIA 281
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGI 60
++ R + IG G+ G+V A E +A++ P + NE + +
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQE----VAIRQMNLQQQPKKELIINEILVMRE-NK 75
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P IV S+ G+ + +++EY + GSL D V + + E + R L+
Sbjct: 76 NPNIVNYLD---SYLVGDELW-VVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQA 128
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L +HS +H DIK N+L+ + K+ DFG + E+S+ E GTP +M+PE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSEMVGTPYWMAPE 186
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
V Y DIW+LG +EM G+P + ++ L+ G EL N P LS
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQN-PEKLSA 244
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+DFL +C D ++R +A+ LL H F+
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 120/250 (48%), Gaps = 14/250 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G G+FG V L + K + + ++ ++ V + + Q P +
Sbjct: 12 LLGKGTFGKVILVR-EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y+F+ +R ++EYA+ G L + ++ E + Y ++ L ++HS+
Sbjct: 71 ---KYAFQTHDRL-CFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSR 124
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
V+ DIKL+N+++ + KI DFGL K+ DG ++F C GTP Y++PE + +N+Y
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-C-GTPEYLAPEVLEDNDY 182
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D W LG + EM G+ + ++ +F L++ E P LS + K L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----EEIRFPRTLSPEAKSLLA 237
Query: 248 KCFLKDPKRR 257
KDPK+R
Sbjct: 238 GLLKKDPKQR 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 120/250 (48%), Gaps = 14/250 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G G+FG V L + K + + ++ ++ V + + Q P +
Sbjct: 12 LLGKGTFGKVILVR-EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y+F+ +R ++EYA+ G L + ++ E + Y ++ L ++HS+
Sbjct: 71 ---KYAFQTHDRL-CFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSR 124
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
V+ DIKL+N+++ + KI DFGL K+ DG ++F C GTP Y++PE + +N+Y
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-C-GTPEYLAPEVLEDNDY 182
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D W LG + EM G+ + ++ +F L++ E P LS + K L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----EEIRFPRTLSPEAKSLLA 237
Query: 248 KCFLKDPKRR 257
KDPK+R
Sbjct: 238 GLLKKDPKQR 247
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 120/250 (48%), Gaps = 14/250 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G G+FG V L + K + + ++ ++ V + + Q P +
Sbjct: 15 LLGKGTFGKVILVR-EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y+F+ +R ++EYA+ G L + ++ E + Y ++ L ++HS+
Sbjct: 74 ---KYAFQTHDRL-CFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSR 127
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
V+ DIKL+N+++ + KI DFGL K+ DG ++F C GTP Y++PE + +N+Y
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-C-GTPEYLAPEVLEDNDY 185
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D W LG + EM G+ + ++ +F L++ E P LS + K L
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----EEIRFPRTLSPEAKSLLA 240
Query: 248 KCFLKDPKRR 257
KDPK+R
Sbjct: 241 GLLKKDPKQR 250
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 20/267 (7%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G GSFG V K E+ + K+ A +S L+ E E L ++ P I++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLD-HPNIMKL 86
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F E FY ++ E + G L D + K+ R E D R + + G+ ++H
Sbjct: 87 FE---ILEDSSSFY-IVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH 140
Query: 128 GFVHCDIKLQNVLVFDND---EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
VH D+K +N+L+ + + KI DFGL S+C + ++ + GT Y++PE V
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGL---STCFQQNTKMKDRIGTAYYIAPE-VLR 196
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG--DLSEQG 242
Y+ CD+W+ G + + SG P + K N + +L R+ G ++P +S+
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGK---NEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 243 KDFLIKCFLKDPKRRWTAEMLLNHPFV 269
KD + K P R TA L HP++
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G G+FG V L + K + + ++ ++ V + + Q P +
Sbjct: 12 LLGKGTFGKVILVR-EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y+F+ +R ++EYA+ G L + ++ E + Y ++ L ++HS+
Sbjct: 71 ---KYAFQTHDRL-CFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSR 124
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
V+ DIKL+N+++ + KI DFGL K+ DG + F C GTP Y++PE + +N+Y
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF-C-GTPEYLAPEVLEDNDY 182
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D W LG + EM G+ + ++ +F L++ E P LS + K L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----EEIRFPRTLSPEAKSLLA 237
Query: 248 KCFLKDPKRR 257
KDPK+R
Sbjct: 238 GLLKKDPKQR 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G G+FG V L + K + + ++ ++ V + + Q P +
Sbjct: 17 LLGKGTFGKVILVR-EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y+F+ +R ++EYA+ G L + ++ E + Y ++ L ++HS+
Sbjct: 76 ---KYAFQTHDRL-CFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSR 129
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
V+ DIKL+N+++ + KI DFGL K+ DG + F C GTP Y++PE + +N+Y
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF-C-GTPEYLAPEVLEDNDY 187
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D W LG + EM G+ + ++ +F L++ E P LS + K L
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----EEIRFPRTLSPEAKSLLA 242
Query: 248 KCFLKDPKRR 257
KDPK+R
Sbjct: 243 GLLKKDPKQR 252
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 20/267 (7%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G GSFG V K E+ + K+ A +S L+ E E L ++ P I++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLD-HPNIMKL 86
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F E FY ++ E + G L D + K+ R E D R + + G+ ++H
Sbjct: 87 FE---ILEDSSSFY-IVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH 140
Query: 128 GFVHCDIKLQNVLVFDND---EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
VH D+K +N+L+ + + KI DFGL S+C + ++ + GT Y++PE V
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGL---STCFQQNTKMKDRIGTAYYIAPE-VLR 196
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG--DLSEQG 242
Y+ CD+W+ G + + SG P + K N + +L R+ G ++P +S+
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGK---NEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 243 KDFLIKCFLKDPKRRWTAEMLLNHPFV 269
KD + K P R TA L HP++
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 13 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 71 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ E GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTELCGTLDYLPPEMIEG 180
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 235
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 18 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA RG + ++K + + E Y + L +
Sbjct: 76 LRLYG---YFHDATRVY-LILEYAPRGEVYKELQKLS--KFDEQRTATYITELANALSYC 129
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 240
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G G+FG V L + K + + ++ ++ V + + Q P +
Sbjct: 12 LLGKGTFGKVILVR-EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y+F+ +R ++EYA+ G L + ++ E + Y ++ L ++HS+
Sbjct: 71 ---KYAFQTHDRL-CFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSR 124
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
V+ DIKL+N+++ + KI DFGL K+ DG + F C GTP Y++PE + +N+Y
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF-C-GTPEYLAPEVLEDNDY 182
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D W LG + EM G+ + ++ +F L++ E P LS + K L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----EEIRFPRTLSPEAKSLLA 237
Query: 248 KCFLKDPKRR 257
KDPK+R
Sbjct: 238 GLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G G+FG V L + K + + ++ ++ V + + Q P +
Sbjct: 12 LLGKGTFGKVILVR-EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y+F+ +R ++EYA+ G L + ++ E + Y ++ L ++HS+
Sbjct: 71 ---KYAFQTHDRL-CFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLHSR 124
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
V+ DIKL+N+++ + KI DFGL K+ DG + F C GTP Y++PE + +N+Y
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXF-C-GTPEYLAPEVLEDNDY 182
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D W LG + EM G+ + ++ +F L++ E P LS + K L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM-----EEIRFPRTLSPEAKSLLA 237
Query: 248 KCFLKDPKRR 257
KDPK+R
Sbjct: 238 GLLKKDPKQR 247
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 20/267 (7%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G GSFG V K E+ + K+ A +S L+ E E L ++ P I++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLD-HPNIMKL 86
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F E FY ++ E + G L D + K+ R E D R + + G+ ++H
Sbjct: 87 FE---ILEDSSSFY-IVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH 140
Query: 128 GFVHCDIKLQNVLVFDND---EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
VH D+K +N+L+ + + KI DFGL S+C + ++ + GT Y++PE V
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGL---STCFQQNTKMKDRIGTAYYIAPE-VLR 196
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG--DLSEQG 242
Y+ CD+W+ G + + SG P + K N + +L R+ G ++P +S+
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGK---NEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 243 KDFLIKCFLKDPKRRWTAEMLLNHPFV 269
KD + K P R TA L HP++
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 21/274 (7%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E++R V+G GSFG V LA+ + + + K EK L
Sbjct: 25 FEFIR--VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P + + F F+ +R + ++E+ + G L ++K R E+ + Y ++
Sbjct: 83 HPFLTQLFC---CFQTPDRLF-FVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISA 136
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L +H KG ++ D+KL NVL+ K+ADFG+ K+ C+G + +F C GTP Y++PE
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF-C-GTPDYIAPE 194
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
+ E Y D WA+G + EM G + + + ++F ++ DE+ P L E
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL----NDEVV-YPTWLHE 249
Query: 241 QGKDFLIKCFLKDPKRRWTA------EMLLNHPF 268
L K+P R + +L HPF
Sbjct: 250 DATGILKSFMTKNPTMRLGSLTQGGEHAILRHPF 283
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 30/261 (11%)
Query: 9 IGHGSFGSVNLAK--------ASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
IG G F V A A K F LM K+ ADC E + L Q+
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIF-DLMDAKARADC-------IKEIDLLKQLN- 90
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK--KQNNGRLQESDVKRYTRSML 118
P +++ + SF + N++LE A G L+ +K K+ + E V +Y +
Sbjct: 91 HPNVIKYYA---SFIEDNEL-NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
L H+HS+ +H DIK NV + K+ D GL + S + S GTP YMS
Sbjct: 147 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV--GTPYYMS 204
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE ++EN Y DIW+LGC + EMA+ + P + K N++SL +I D P +P D
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM--NLYSLCKKIEQCD-YPPLPSD 261
Query: 238 -LSEQGKDFLIKCFLKDPKRR 257
SE+ + + C DP++R
Sbjct: 262 HYSEELRQLVNMCINPDPEKR 282
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 17/269 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGI 60
++ R + IG G+ G+V A E +A++ P + NE + +
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQE----VAIRQMNLQQQPKKELIINEILVMRE-NK 75
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P IV S+ G+ + +++EY + GSL D V + + E + R L+
Sbjct: 76 NPNIVNYLD---SYLVGDELW-VVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQA 128
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L +HS +H DIK N+L+ + K+ DFG + E+S+ GTP +M+PE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVGTPYWMAPE 186
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
V Y DIW+LG +EM G+P + ++ L+ G EL N P LS
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQN-PEKLSA 244
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+DFL +C D ++R +A+ LL H F+
Sbjct: 245 IFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 117/221 (52%), Gaps = 20/221 (9%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV +G YS GE ++ +E+ GSL +KK GR+ E + + + +++KGL
Sbjct: 64 PYIVGFYGAFYS--DGE--ISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 117
Query: 122 RHIHSKG-FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
++ K +H D+K N+LV E K+ DFG++ + + SF GT YMSPE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ--LIDSMANSF--VGTRSYMSPE 173
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGK---PAWNHKQDSN----VFSLLIRIGVGDELPN 233
+ Y DIW++G ++VEMA G+ P + K+DS +F LL I V + P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYI-VNEPPPK 232
Query: 234 IP-GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+P G S + +DF+ KC +K+P R + L+ H F+ D
Sbjct: 233 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 273
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 117/218 (53%), Gaps = 22/218 (10%)
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
CP IV+CFG + ++ + G+ A+++KK+ G + E + + T +++K
Sbjct: 83 CPYIVQCFGTFITNT------DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 121 LRHIHSK-GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
L ++ K G +H D+K N+L+ + + K+ DFG++ + D + +S C YM+P
Sbjct: 137 LYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA---YMAP 193
Query: 180 ESVN-----ENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRIGVGDELPN 233
E ++ + +Y+ D+W+LG ++VE+A+G+ P N K D V + +++ +E P
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ----EEPPL 249
Query: 234 IPGDLSEQG--KDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+PG + G + F+ C KD ++R LL H F+
Sbjct: 250 LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 125/269 (46%), Gaps = 17/269 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGI 60
++ R + IG G+ G+V A E +A++ P + NE + +
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQE----VAIRQMNLQQQPKKELIINEILVMRE-NK 75
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P IV S+ G+ + +++EY + GSL D V + + E + R L+
Sbjct: 76 NPNIVNYLD---SYLVGDELW-VVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQA 128
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L +HS +H DIK N+L+ + K+ DFG + E+S+ GTP +M+PE
Sbjct: 129 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPE 186
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
V Y DIW+LG +EM G+P + ++ L+ G EL N P LS
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQN-PEKLSA 244
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+DFL +C D ++R +A+ LL H F+
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 13 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 71 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ + GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 235
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 18 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 76 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 129
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ + GT Y+ PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDLCGTLDYLPPEMIEG 185
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 240
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 17/269 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGI 60
++ R + IG G+ G+V A E +A++ P + NE + +
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQE----VAIRQMNLQQQPKKELIINEILVMRE-NK 76
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P IV S+ G+ + +++EY + GSL D V + + E + R L+
Sbjct: 77 NPNIVNYLD---SYLVGDELW-VVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQA 129
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L +HS +H DIK N+L+ + K+ DFG + E+S+ GTP +M+PE
Sbjct: 130 LEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSXMVGTPYWMAPE 187
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
V Y DIW+LG +EM G+P + ++ L+ G EL N P LS
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQN-PEKLSA 245
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+DFL +C D ++R +A+ L+ H F+
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 14 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 72 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 125
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ + GT Y+ PE +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDLCGTLDYLPPEMIEG 181
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 236
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 18 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 76 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 129
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 240
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 241 LISRLLKHNPSQRPXLREVLEHPWITAN 268
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 13 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 71 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ + GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 235
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 13 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 71 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLCGTLDYLPPEMIEG 180
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 235
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 16 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 74 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 127
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLCGTLDYLPPEMIEG 183
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 238
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 14/215 (6%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV +G YS GE ++ +E+ GSL +KK GR+ E + + + +++KGL
Sbjct: 83 PYIVGFYGAFYS--DGE--ISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 136
Query: 122 RHIHSKG-FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
++ K +H D+K N+LV E K+ DFG++ + + SF GT YMSPE
Sbjct: 137 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ--LIDSMANSF--VGTRSYMSPE 192
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRIGVGDELPNIP-GDL 238
+ Y DIW++G ++VEMA G+ P + +F LL I V + P +P G
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI-VNEPPPKLPSGVF 251
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
S + +DF+ KC +K+P R + L+ H F+ D
Sbjct: 252 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 286
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 12 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 69
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 70 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 123
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 179
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 234
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 235 LISRLLKHNPSQRPMLREVLEHPWITAN 262
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 13 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 71 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTXLCGTLDYLPPEMIEG 180
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 235
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 17 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 75 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 128
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 239
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 240 LISRLLKHNPSQRPMLREVLEHPWITAN 267
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 13 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 71 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 180
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 235
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 16 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 74 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 127
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 238
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 15 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 72
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 73 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 126
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLCGTLDYLPPEMIEG 182
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 237
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWITAN 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 16 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 74 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 127
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 238
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 18 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 75
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 76 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 129
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 240
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ +S+F + V A + V + +E Q + P I
Sbjct: 13 GRPLGKGKFGNVYLAREK--NSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 71 LRLYG---YFHDSTRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + + R+ P ++E +D
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEF-----TFPDFVTEGARD 235
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 16 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 74 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 127
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ + GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRDDLCGTLDYLPPEMIEG 183
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 238
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 13 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 71 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 124
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 235
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 39 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 96
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 97 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 150
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 261
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWITAN 289
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 30 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 87
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 88 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 141
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 252
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 253 LISRLLKHNPSQRPMLREVLEHPWITAN 280
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 39 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 96
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 97 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 150
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ + GT Y+ PE +
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 261
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 262 LISRLLKHNPSQRPMLREVLEHPWITAN 289
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 16 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 74 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 127
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLDYLPPEMIEG 183
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 238
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 14 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 71
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 72 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 125
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRDTLCGTLDYLPPEMIEG 181
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 236
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V + V + +E Q + P I
Sbjct: 17 GRPLGKGKFGNVYLARERQ--SKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + R E Y + L +
Sbjct: 75 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--RFDEQRTATYITELANALSYC 128
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ N E KIADFG S S+ GT Y+ PE +
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E G P + + + R+ P ++E +D
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEF-----TFPDFVTEGARD 239
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + + +R T +L HP++ A+
Sbjct: 240 LISRLLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 8 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-XINKML 62
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 63 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 116
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 21/254 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCA----DCPPSSVTLKNEKEALDQIGICPQ 63
V+G GSFG V LA K + E ++ +K D ++ K LD+ Q
Sbjct: 26 VLGKGSFGKVMLAD-RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQ 84
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+ CF + +R Y ++EY + G L + Q G+ +E Y + GL
Sbjct: 85 LHSCF------QTVDRLY-FVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFF 135
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+H +G ++ D+KL NV++ KIADFG+ K+ DG ++ F C GTP Y++PE +
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREF-C-GTPDYIAPEIIA 193
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WA G + EM +G+P ++ + + +F ++ V + P LS++
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV-----SYPKSLSKEAV 248
Query: 244 DFLIKCFLKDPKRR 257
K P +R
Sbjct: 249 SICKGLMTKHPAKR 262
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 99/190 (52%), Gaps = 13/190 (6%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
+++E+ G+L D V + R+ E + S+L+ L ++H++G +H DIK ++L+
Sbjct: 119 VVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 175
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVE 202
+ K++DFG + S + + + GTP +M+PE ++ Y DIW+LG V+E
Sbjct: 176 SDGRIKLSDFGFCAQVSKEVPKRKXLV--GTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 233
Query: 203 MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL---SEQGKDFLIKCFLKDPKRRWT 259
M G+P + ++ + D LP DL S + FL +++P +R T
Sbjct: 234 MIDGEPPYFNEPPLQAMR-----RIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRAT 288
Query: 260 AEMLLNHPFV 269
A+ LL HPF+
Sbjct: 289 AQELLGHPFL 298
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 17/269 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGI 60
++ R + IG G+ G+V A E +A++ P + NE + +
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQE----VAIRQMNLQQQPKKELIINEILVMRE-NK 76
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P IV S+ G+ + +++EY + GSL D V + + E + R L+
Sbjct: 77 NPNIVNYLD---SYLVGDELW-VVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQA 129
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L +HS +H +IK N+L+ + K+ DFG + E+S+ GTP +M+PE
Sbjct: 130 LEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFC--AQITPEQSKRSTMVGTPYWMAPE 187
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
V Y DIW+LG +EM G+P + ++ L+ G EL N P LS
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQN-PEKLSA 245
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+DFL +C D ++R +A+ L+ H F+
Sbjct: 246 IFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-XINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR+ + + + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 72 YSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVH 131
+ F + F ++LE R SL + K++ L E + + Y R ++ G +++H +H
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 132 CDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPC 191
D+KL N+ + ++ E KI DFGLA K DGER ++ C GTP Y++PE +++ +
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-C-GTPNYIAPEVLSKKGHSFEV 198
Query: 192 DIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFL 251
D+W++GC + + GKP + + S + +RI + +IP ++ + K
Sbjct: 199 DVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEY--SIPKHINPVAASLIQKMLQ 253
Query: 252 KDPKRRWTAEMLLNHPFVCA 271
DP R T LLN F +
Sbjct: 254 TDPTARPTINELLNDEFFTS 273
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 72 YSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVH 131
+ F + F ++LE R SL + K++ L E + + Y R ++ G +++H +H
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIH 144
Query: 132 CDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPC 191
D+KL N+ + ++ E KI DFGLA K DGER ++ C GTP Y++PE +++ +
Sbjct: 145 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-C-GTPNYIAPEVLSKKGHSFEV 202
Query: 192 DIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFL 251
D+W++GC + + GKP + + S + +RI + +IP ++ + K
Sbjct: 203 DVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEY--SIPKHINPVAASLIQKMLQ 257
Query: 252 KDPKRRWTAEMLLNHPFVCA 271
DP R T LLN F +
Sbjct: 258 TDPTARPTINELLNDEFFTS 277
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 39/290 (13%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
IG G++G V A+ K F +L V+ ++ E L + P +VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGS-LADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
F D + + +R L L + L + K + +K +L+GL +H
Sbjct: 79 LF-DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-----YMSPE 180
S VH D+K QN+LV + + K+ADFGLA R SF+ T + Y +PE
Sbjct: 138 SHRVVHRDLKPQNILVTSSGQIKLADFGLA--------RIYSFQMALTSVVVTLWYRAPE 189
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGV-GDE-------L 231
+ ++ Y P D+W++GC EM KP + D + +L IG+ G+E L
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 232 P-------------NIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P D+ E GKD L+KC +P +R +A L+HP+
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 72 YSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVH 131
+ F + F ++LE R SL + K++ L E + + Y R ++ G +++H +H
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 132 CDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPC 191
D+KL N+ + ++ E KI DFGLA K DGER ++ C GTP Y++PE +++ +
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL-C-GTPNYIAPEVLSKKGHSFEV 198
Query: 192 DIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFL 251
D+W++GC + + GKP + + S + +RI + +IP ++ + K
Sbjct: 199 DVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEY--SIPKHINPVAASLIQKMLQ 253
Query: 252 KDPKRRWTAEMLLNHPFVCA 271
DP R T LLN F +
Sbjct: 254 TDPTARPTINELLNDEFFTS 273
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR+ + + + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 16 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 73
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 74 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 127
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIA+FG S S+ GT Y+ PE +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 238
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 20/272 (7%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNE---KEALDQIG 59
++RG +G G F F + KS P + E ++LD
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN-- 101
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
P +V G F + + F ++LE R SL + K++ + E + + + R ++
Sbjct: 102 --PHVVGFHG----FFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQ 153
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G++++H+ +H D+KL N+ + D+ + KI DFGLA K DGER ++ C GTP Y++P
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL-C-GTPNYIAP 211
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + + + DIW+LGC + + GKP + + S + IRI + ++P ++
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF---ETSCLKETYIRIKKNEY--SVPRHIN 266
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
+ + DP R + LL F +
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 22/277 (7%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E+L+ ++G G+FG V L K K + + ++ +K V + + Q
Sbjct: 150 FEYLK--LLGKGTFGKVILVK-EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P + YSF+ +R ++EYA+ G L + ++ E + Y ++
Sbjct: 207 HPFLTAL---KYSFQTHDRL-CFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSA 260
Query: 121 LRHIHS-KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
L ++HS K V+ D+KL+N+++ + KI DFGL K+ DG ++F C GTP Y++P
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF-C-GTPEYLAP 318
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + +N+Y D W LG + EM G+ + ++ +F L++ E P L
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----EEIRFPRTLG 373
Query: 240 EQGKDFLIKCFLKDPKRRW-----TAEMLLNHPFVCA 271
+ K L KDPK+R A+ ++ H F
Sbjct: 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 39/290 (13%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
IG G++G V A+ K F +L V+ ++ E L + P +VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGS-LADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
F D + + +R L L + L + K + +K +L+GL +H
Sbjct: 79 LF-DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-----YMSPE 180
S VH D+K QN+LV + + K+ADFGLA R SF+ T + Y +PE
Sbjct: 138 SHRVVHRDLKPQNILVTSSGQIKLADFGLA--------RIYSFQMALTSVVVTLWYRAPE 189
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGV-GDE-------L 231
+ ++ Y P D+W++GC EM KP + D + +L IG+ G+E L
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 232 P-------------NIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P D+ E GKD L+KC +P +R +A L+HP+
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + +F + V A + V + +E Q + P I
Sbjct: 10 GRPLGKGKFGNVYLAREKQ--RKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 67
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 68 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 121
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIADFG S S+ GT Y+ PE +
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 177
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 232
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 233 LISRLLKHNPSQRPMLREVLEHPWITAN 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V A + V + +E Q + P I
Sbjct: 15 GRPLGKGKFGNVYLAREKQ--SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 72
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + + E Y + L +
Sbjct: 73 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYC 126
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ E KIA+FG S S+ GT Y+ PE +
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGW----SVHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E GKP + + + R+ P ++E +D
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-----TFPDFVTEGARD 237
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + +P +R +L HP++ A+
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWITAN 265
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 22/277 (7%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E+L+ ++G G+FG V L K K + + ++ +K V + + Q
Sbjct: 153 FEYLK--LLGKGTFGKVILVK-EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P + YSF+ +R ++EYA+ G L + ++ E + Y ++
Sbjct: 210 HPFLTAL---KYSFQTHDRL-CFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSA 263
Query: 121 LRHIHS-KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
L ++HS K V+ D+KL+N+++ + KI DFGL K+ DG ++F C GTP Y++P
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF-C-GTPEYLAP 321
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + +N+Y D W LG + EM G+ + ++ +F L++ E P L
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----EEIRFPRTLG 376
Query: 240 EQGKDFLIKCFLKDPKRRW-----TAEMLLNHPFVCA 271
+ K L KDPK+R A+ ++ H F
Sbjct: 377 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 413
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 125/290 (43%), Gaps = 39/290 (13%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
IG G++G V A+ K F +L V+ ++ E L + P +VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGS-LADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
F D + + +R L L + L + K + +K +L+GL +H
Sbjct: 79 LF-DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-----YMSPE 180
S VH D+K QN+LV + + K+ADFGLA R SF+ T + Y +PE
Sbjct: 138 SHRVVHRDLKPQNILVTSSGQIKLADFGLA--------RIYSFQMALTSVVVTLWYRAPE 189
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGDE--------L 231
+ ++ Y P D+W++GC EM KP + D + +L IG+ E L
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 249
Query: 232 P-------------NIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P D+ E GKD L+KC +P +R +A L+HP+
Sbjct: 250 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 119/268 (44%), Gaps = 18/268 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G +G G FG+V LA+ + S+F + V + V + +E Q + P I
Sbjct: 17 GRPLGKGKFGNVYLARERQ--SKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNI 74
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R +G F R Y L+LEYA G++ ++K + R E Y + L +
Sbjct: 75 LRLYG---YFHDATRVY-LILEYAPLGTVYRELQKLS--RFDEQRTATYITELANALSYC 128
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HSK +H DIK +N+L+ N E KIADFG S S+ GT Y+ PE +
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGW----SVHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
++ D+W+LG E G P + + + R+ P ++E +D
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEF-----TFPDFVTEGARD 239
Query: 245 FLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + + +R T +L HP++ A+
Sbjct: 240 LISRLLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEK--EALDQIGICPQIVR 66
IGHGSFG+V A+ + S ++A+K + S NEK + + ++ ++
Sbjct: 23 IGHGSFGAVYFARDVRNSE----VVAIKKMSYSGKQS----NEKWQDIIKEVRFLQKLRH 74
Query: 67 CFGDDYSFEKG----ERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
Y +G E L++EY GS +D ++ LQE ++ T L+GL
Sbjct: 75 PNTIQY---RGCYLREHTAWLVMEYC-LGSASDLLEVHKKP-LQEVEIAAVTHGALQGLA 129
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE-- 180
++HS +H D+K N+L+ + K+ DFG S+ + F GTP +M+PE
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFG----SASIMAPANXF--VGTPYWMAPEVI 183
Query: 181 -SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+++E +Y+ D+W+LG +E+A KP + N S L I + G S
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLF---NMNAMSALYHIAQNESPALQSGHWS 240
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
E ++F+ C K P+ R T+E+LL H FV
Sbjct: 241 EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEK--EALDQIGICPQIVR 66
IGHGSFG+V A+ + S ++A+K + S NEK + + ++ ++
Sbjct: 62 IGHGSFGAVYFARDVRNSE----VVAIKKMSYSGKQS----NEKWQDIIKEVRFLQKLRH 113
Query: 67 CFGDDYSFEKG----ERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
Y +G E L++EY GS +D ++ LQE ++ T L+GL
Sbjct: 114 PNTIQY---RGCYLREHTAWLVMEYC-LGSASDLLEVHKKP-LQEVEIAAVTHGALQGLA 168
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE-- 180
++HS +H D+K N+L+ + K+ DFG S+ + F GTP +M+PE
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFG----SASIMAPANXF--VGTPYWMAPEVI 222
Query: 181 -SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+++E +Y+ D+W+LG +E+A KP + N S L I + G S
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLF---NMNAMSALYHIAQNESPALQSGHWS 279
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
E ++F+ C K P+ R T+E+LL H FV
Sbjct: 280 EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 310
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 14/255 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG GS+ V L + K + + K + ++ EK +Q P +V
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV-- 116
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G F+ R + ++EY + G L +++Q +L E + Y+ + L ++H +
Sbjct: 117 -GLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER 172
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
G ++ D+KL NVL+ K+ D+G+ K+ G+ + +F C GTP Y++PE + +Y
Sbjct: 173 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF-C-GTPNYIAPEILRGEDY 230
Query: 188 EAPCDIWALGCAVVEMASGKPAWN-----HKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
D WALG + EM +G+ ++ D N L ++ + ++ IP LS +
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKA 289
Query: 243 KDFLIKCFLKDPKRR 257
L KDPK R
Sbjct: 290 ASVLKSFLNKDPKER 304
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 20/272 (7%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNE---KEALDQIG 59
++RG +G G F F + KS P + E ++LD
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN-- 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
P +V G F + + F ++LE R SL + K++ + E + + + R ++
Sbjct: 86 --PHVVGFHG----FFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQ 137
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G++++H+ +H D+KL N+ + D+ + KI DFGLA K DGER + C GTP Y++P
Sbjct: 138 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-C-GTPNYIAP 195
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + + + DIW+LGC + + GKP + + S + IRI + ++P ++
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF---ETSCLKETYIRIKKNEY--SVPRHIN 250
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
+ + DP R + LL F +
Sbjct: 251 PVASALIRRMLHADPTLRPSVAELLTDEFFTS 282
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 22/277 (7%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E+L+ ++G G+FG V L K K + + ++ +K V + + Q
Sbjct: 12 FEYLK--LLGKGTFGKVILVK-EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P + YSF+ +R ++EYA+ G L + ++ E + Y ++
Sbjct: 69 HPFLTAL---KYSFQTHDRL-CFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSA 122
Query: 121 LRHIHS-KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
L ++HS K V+ D+KL+N+++ + KI DFGL K+ DG + F C GTP Y++P
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF-C-GTPEYLAP 180
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + +N+Y D W LG + EM G+ + ++ +F L++ E P L
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----EEIRFPRTLG 235
Query: 240 EQGKDFLIKCFLKDPKRRW-----TAEMLLNHPFVCA 271
+ K L KDPK+R A+ ++ H F
Sbjct: 236 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 272
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 22/277 (7%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E+L+ ++G G+FG V L K K + + ++ +K V + + Q
Sbjct: 11 FEYLK--LLGKGTFGKVILVK-EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P + YSF+ +R ++EYA+ G L + ++ E + Y ++
Sbjct: 68 HPFLTAL---KYSFQTHDRL-CFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSA 121
Query: 121 LRHIHS-KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
L ++HS K V+ D+KL+N+++ + KI DFGL K+ DG + F C GTP Y++P
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF-C-GTPEYLAP 179
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + +N+Y D W LG + EM G+ + ++ +F L++ E P L
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----EEIRFPRTLG 234
Query: 240 EQGKDFLIKCFLKDPKRRW-----TAEMLLNHPFVCA 271
+ K L KDPK+R A+ ++ H F
Sbjct: 235 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 271
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 20/272 (7%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNE---KEALDQIG 59
++RG +G G F F + KS P + E ++LD
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN-- 101
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
P +V G F + + F ++LE R SL + K++ + E + + + R ++
Sbjct: 102 --PHVVGFHG----FFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQ 153
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G++++H+ +H D+KL N+ + D+ + KI DFGLA K DGER + C GTP Y++P
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL-C-GTPNYIAP 211
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + + + DIW+LGC + + GKP + + S + IRI + ++P ++
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF---ETSCLKETYIRIKKNEY--SVPRHIN 266
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
+ + DP R + LL F +
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 22/277 (7%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E+L+ ++G G+FG V L K K + + ++ +K V + + Q
Sbjct: 10 FEYLK--LLGKGTFGKVILVK-EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P + YSF+ +R ++EYA+ G L + ++ E + Y ++
Sbjct: 67 HPFLTAL---KYSFQTHDRL-CFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSA 120
Query: 121 LRHIHS-KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
L ++HS K V+ D+KL+N+++ + KI DFGL K+ DG + F C GTP Y++P
Sbjct: 121 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF-C-GTPEYLAP 178
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + +N+Y D W LG + EM G+ + ++ +F L++ E P L
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-----EEIRFPRTLG 233
Query: 240 EQGKDFLIKCFLKDPKRRW-----TAEMLLNHPFVCA 271
+ K L KDPK+R A+ ++ H F
Sbjct: 234 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 270
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 9/200 (4%)
Query: 72 YSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVH 131
+ F + F ++LE R SL + K++ L E + + Y R ++ G +++H +H
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIH 162
Query: 132 CDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPC 191
D+KL N+ + ++ E KI DFGLA K DGER + C GTP Y++PE +++ +
Sbjct: 163 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-C-GTPNYIAPEVLSKKGHSFEV 220
Query: 192 DIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFL 251
D+W++GC + + GKP + + S + +RI + +IP ++ + K
Sbjct: 221 DVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEY--SIPKHINPVAASLIQKMLQ 275
Query: 252 KDPKRRWTAEMLLNHPFVCA 271
DP R T LLN F +
Sbjct: 276 TDPTARPTINELLNDEFFTS 295
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-XINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 20/272 (7%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNE---KEALDQIG 59
++RG +G G F F + KS P + E ++LD
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN-- 101
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
P +V G F + + F ++LE R SL + K++ + E + + + R ++
Sbjct: 102 --PHVVGFHG----FFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQ 153
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G++++H+ +H D+KL N+ + D+ + KI DFGLA K DGER + C GTP Y++P
Sbjct: 154 GVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-C-GTPNYIAP 211
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + + + DIW+LGC + + GKP + + S + IRI + ++P ++
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF---ETSCLKETYIRIKKNEY--SVPRHIN 266
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
+ + DP R + LL F +
Sbjct: 267 PVASALIRRMLHADPTLRPSVAELLTDEFFTS 298
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 9/197 (4%)
Query: 72 YSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVH 131
+ F + F ++LE R SL + K++ L E + + Y R ++ G +++H +H
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIH 138
Query: 132 CDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPC 191
D+KL N+ + ++ E KI DFGLA K DGER + C GTP Y++PE +++ +
Sbjct: 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-C-GTPNYIAPEVLSKKGHSFEV 196
Query: 192 DIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFL 251
D+W++GC + + GKP + + S + +RI + +IP ++ + K
Sbjct: 197 DVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEY--SIPKHINPVAASLIQKMLQ 251
Query: 252 KDPKRRWTAEMLLNHPF 268
DP R T LLN F
Sbjct: 252 TDPTARPTINELLNDEF 268
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 14/255 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG GS+ V L + K + + K + ++ EK +Q P +V
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV-- 69
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G F+ R + ++EY + G L +++Q +L E + Y+ + L ++H +
Sbjct: 70 -GLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER 125
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
G ++ D+KL NVL+ K+ D+G+ K+ G+ + F C GTP Y++PE + +Y
Sbjct: 126 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF-C-GTPNYIAPEILRGEDY 183
Query: 188 EAPCDIWALGCAVVEMASGKPAWN-----HKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
D WALG + EM +G+ ++ D N L ++ + ++ IP LS +
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKA 242
Query: 243 KDFLIKCFLKDPKRR 257
L KDPK R
Sbjct: 243 ASVLKSFLNKDPKER 257
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 9/200 (4%)
Query: 72 YSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVH 131
+ F + F ++LE R SL + K++ L E + + Y R ++ G +++H +H
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIH 164
Query: 132 CDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPC 191
D+KL N+ + ++ E KI DFGLA K DGER + C GTP Y++PE +++ +
Sbjct: 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL-C-GTPNYIAPEVLSKKGHSFEV 222
Query: 192 DIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFL 251
D+W++GC + + GKP + + S + +RI + +IP ++ + K
Sbjct: 223 DVWSIGCIMYTLLVGKPPF---ETSCLKETYLRIKKNEY--SIPKHINPVAASLIQKMLQ 277
Query: 252 KDPKRRWTAEMLLNHPFVCA 271
DP R T LLN F +
Sbjct: 278 TDPTARPTINELLNDEFFTS 297
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 14/255 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG GS+ V L + K + + K + ++ EK +Q P +V
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV-- 73
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G F+ R + ++EY + G L +++Q +L E + Y+ + L ++H +
Sbjct: 74 -GLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER 129
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
G ++ D+KL NVL+ K+ D+G+ K+ G+ + F C GTP Y++PE + +Y
Sbjct: 130 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF-C-GTPNYIAPEILRGEDY 187
Query: 188 EAPCDIWALGCAVVEMASGKPAWN-----HKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
D WALG + EM +G+ ++ D N L ++ + ++ IP LS +
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKA 246
Query: 243 KDFLIKCFLKDPKRR 257
L KDPK R
Sbjct: 247 ASVLKSFLNKDPKER 261
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 8 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 62
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 63 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 116
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR+ + + + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 6 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 60
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR+ + + + E D +R+ ++
Sbjct: 61 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMA 114
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 115 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR+ + + + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 8 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 62
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 63 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 116
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 8 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 62
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 63 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 116
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 8 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 62
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 63 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 116
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 8 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 62
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 63 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 116
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R IG GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ K+ADFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 44/288 (15%)
Query: 7 DVIGHGSFGSVNLA----KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC- 61
+VIG G+ V A K KV+ + +L C S L E +A+ Q C
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINL------EKCQTSMDELLKEIQAMSQ---CH 71
Query: 62 -PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK------KQNNGRLQESDVKRYT 114
P IV + SF + + L+++ S GS+ D +K + +G L ES +
Sbjct: 72 HPNIVSYYT---SFVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 127
Query: 115 RSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECR--- 171
R +L+GL ++H G +H D+K N+L+ ++ +IADFG++ + G+ +++ +
Sbjct: 128 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 172 GTPLYMSPESVNE-NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIR------ 224
GTP +M+PE + + Y+ DIW+ G +E+A+G ++ V L ++
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
Query: 225 -IGVGDELPNIPGDLSEQGKDF---LIKCFLKDPKRRWTAEMLLNHPF 268
GV D+ L + GK F + C KDP++R TA LL H F
Sbjct: 248 ETGVQDK-----EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 8 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 62
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 63 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 116
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 44/288 (15%)
Query: 7 DVIGHGSFGSVNLA----KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC- 61
+VIG G+ V A K KV+ + +L C S L E +A+ Q C
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINL------EKCQTSMDELLKEIQAMSQ---CH 66
Query: 62 -PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK------KQNNGRLQESDVKRYT 114
P IV + SF + + L+++ S GS+ D +K + +G L ES +
Sbjct: 67 HPNIVSYYT---SFVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL 122
Query: 115 RSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECR--- 171
R +L+GL ++H G +H D+K N+L+ ++ +IADFG++ + G+ +++ +
Sbjct: 123 REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 172 GTPLYMSPESVNE-NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIR------ 224
GTP +M+PE + + Y+ DIW+ G +E+A+G ++ V L ++
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 242
Query: 225 -IGVGDELPNIPGDLSEQGKDF---LIKCFLKDPKRRWTAEMLLNHPF 268
GV D+ L + GK F + C KDP++R TA LL H F
Sbjct: 243 ETGVQDK-----EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 285
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 14/255 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG GS+ V L + K + + K + ++ EK +Q P +V
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV-- 84
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G F+ R + ++EY + G L +++Q +L E + Y+ + L ++H +
Sbjct: 85 -GLHSCFQTESRLF-FVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER 140
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
G ++ D+KL NVL+ K+ D+G+ K+ G+ + F C GTP Y++PE + +Y
Sbjct: 141 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF-C-GTPNYIAPEILRGEDY 198
Query: 188 EAPCDIWALGCAVVEMASGKPAWN-----HKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
D WALG + EM +G+ ++ D N L ++ + ++ IP +S +
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSMSVKA 257
Query: 243 KDFLIKCFLKDPKRR 257
L KDPK R
Sbjct: 258 ASVLKSFLNKDPKER 272
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EYA G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+++ K+ DFGLAK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 28/267 (10%)
Query: 2 EWLRGDVIGHGSFGSV------NLAKASKVSSE--FPSLMAVKSCADCPPSSVTLKNEKE 53
E LR V+G G +G V A K+ + M V++ D + K E+
Sbjct: 20 ELLR--VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT----KAERN 73
Query: 54 ALDQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRY 113
L+++ P IV Y+F+ G + Y L+LEY S G L +++++ G E Y
Sbjct: 74 ILEEVK-HPFIVDLI---YAFQTGGKLY-LILEYLSGGELFMQLERE--GIFMEDTACFY 126
Query: 114 TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGT 173
+ L H+H KG ++ D+K +N+++ K+ DFGL K+S DG + +F C GT
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF-C-GT 184
Query: 174 PLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPN 233
YM+PE + + + D W+LG + +M +G P + + +++ + N
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL-----N 239
Query: 234 IPGDLSEQGKDFLIKCFLKDPKRRWTA 260
+P L+++ +D L K ++ R A
Sbjct: 240 LPPYLTQEARDLLKKLLKRNAASRLGA 266
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G++G V LA ++V+ E ++ V K DCP + +KE
Sbjct: 8 DWDLVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENI-----KKEICINAM 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + V F Y + L LEY S G L DR++ + E D +R+ ++
Sbjct: 62 LNHENVVKF---YGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 116
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R IG GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYMPGGDMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ K+ADFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R IG GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYMPGGDMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ K+ADFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 135/274 (49%), Gaps = 27/274 (9%)
Query: 5 RGDVIGHGSFGSVN----LAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
+ +++G G FG V+ A K++++ +K + +KNE ++Q+
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE-------VKNEISVMNQLD- 144
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
+++ + +FE L++EY G L DR+ ++ L E D + + + +G
Sbjct: 145 HANLIQLYD---AFESKNDIV-LVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEG 199
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDND--EAKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
+RH+H +H D+K +N+L + D + KI DFGLA++ + +F GTP +++
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLA 256
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI--RIGVGDELPNIPG 236
PE VN + P D+W++G + SG + D+ + ++ R + DE
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQ--- 313
Query: 237 DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
D+SE+ K+F+ K +K+ R +A L HP++
Sbjct: 314 DISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPH 72
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + +++E G L R++ + + E + +S+ + +++
Sbjct: 73 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE
Sbjct: 133 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPE 189
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD+W+LG + + G P + + + RI +G E PN +
Sbjct: 190 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 249
Query: 238 LSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+SE+ K LI+ LK +P +R T +NHP++
Sbjct: 250 VSEEVK-MLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 20 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPH 71
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + +++E G L R++ + + E + +S+ + +++
Sbjct: 72 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 131
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE
Sbjct: 132 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPE 188
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD+W+LG + + G P + + + RI +G E PN +
Sbjct: 189 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 248
Query: 238 LSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+SE+ K LI+ LK +P +R T +NHP++
Sbjct: 249 VSEEVK-MLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + F ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ +YSF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EYSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + F ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ +YSF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EYSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 26 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPH 77
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + +++E G L R++ + + E + +S+ + +++
Sbjct: 78 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 137
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE
Sbjct: 138 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPE 194
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD+W+LG + + G P + + + RI +G E PN +
Sbjct: 195 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 254
Query: 238 LSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+SE+ K LI+ LK +P +R T +NHP++
Sbjct: 255 VSEEVK-MLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + F ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ +YSF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EYSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 27 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPH 78
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + +++E G L R++ + + E + +S+ + +++
Sbjct: 79 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 138
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE
Sbjct: 139 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPE 195
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD+W+LG + + G P + + + RI +G E PN +
Sbjct: 196 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 255
Query: 238 LSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+SE+ K LI+ LK +P +R T +NHP++
Sbjct: 256 VSEEVK-MLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 19/270 (7%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR 66
V+G G G V + +F A+K DCP + + E E + CP IVR
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPHIVR 89
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
+ G + +++E G L R++ + + E + +S+ + ++++HS
Sbjct: 90 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 149
Query: 127 KGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE +
Sbjct: 150 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPEVLG 206
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GDLSE 240
+Y+ CD+W+LG + + G P + + + RI +G E PN ++SE
Sbjct: 207 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 266
Query: 241 QGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+ K LI+ LK +P +R T +NHP++
Sbjct: 267 EVK-MLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPH 70
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + +++E G L R++ + + E + +S+ + +++
Sbjct: 71 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 130
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE
Sbjct: 131 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPE 187
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD+W+LG + + G P + + + RI +G E PN +
Sbjct: 188 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 247
Query: 238 LSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+SE+ K LI+ LK +P +R T +NHP++
Sbjct: 248 VSEEVK-MLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 25 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPH 76
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + +++E G L R++ + + E + +S+ + +++
Sbjct: 77 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 136
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE
Sbjct: 137 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPE 193
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD+W+LG + + G P + + + RI +G E PN +
Sbjct: 194 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 253
Query: 238 LSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+SE+ K LI+ LK +P +R T +NHP++
Sbjct: 254 VSEEVK-MLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPH 70
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + +++E G L R++ + + E + +S+ + +++
Sbjct: 71 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 130
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ ++ C TP Y++PE
Sbjct: 131 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEP--CY-TPYYVAPE 187
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD+W+LG + + G P + + + RI +G E PN +
Sbjct: 188 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 247
Query: 238 LSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+SE+ K LI+ LK +P +R T +NHP++
Sbjct: 248 VSEEVK-MLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPH 72
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + +++E G L R++ + + E + +S+ + +++
Sbjct: 73 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE
Sbjct: 133 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPE 189
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD+W+LG + + G P + + + RI +G E PN +
Sbjct: 190 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 249
Query: 238 LSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+SE+ K LI+ LK +P +R T +NHP++
Sbjct: 250 VSEEVK-MLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 16/214 (7%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV +G YS GE ++ +E+ GSL +KK GR+ E + + + +++KGL
Sbjct: 67 PYIVGFYGAFYS--DGE--ISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 120
Query: 122 RHIHSKG-FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
++ K +H D+K N+LV E K+ DFG++ + E + F GT YMSPE
Sbjct: 121 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ--LIDEMANEF--VGTRSYMSPE 176
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL-S 239
+ Y DIW++G ++VEMA G+ + +F LL I V + P +P + S
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDYI-VNEPPPKLPSAVFS 232
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+ +DF+ KC +K+P R + L+ H F+ D
Sbjct: 233 LEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 266
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK + Q P
Sbjct: 46 RIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKR-IQQAVNFPF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y ++LEYA G + +++ GR E + Y ++ +
Sbjct: 104 LVKL---EFSFKDNSNLY-MVLEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ K+ADFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 71 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPH 122
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + +++E G L R++ + + E + +S+ + +++
Sbjct: 123 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 182
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE
Sbjct: 183 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPE 239
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD+W+LG + + G P + + + RI +G E PN +
Sbjct: 240 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 299
Query: 238 LSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+SE+ K LI+ LK +P +R T +NHP++
Sbjct: 300 VSEEVK-MLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EYA G + +++ GR E + Y ++ +
Sbjct: 104 LVKL---EFSFKDNSNLY-MVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+++ K+ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 19/273 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPH 116
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + +++E G L R++ + + E + +S+ + +++
Sbjct: 117 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 176
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE
Sbjct: 177 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPE 233
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD+W+LG + + G P + + + RI +G E PN +
Sbjct: 234 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293
Query: 238 LSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+SE+ K LI+ LK +P +R T +NHP++
Sbjct: 294 VSEEVK-MLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 126/267 (47%), Gaps = 28/267 (10%)
Query: 2 EWLRGDVIGHGSFGSV------NLAKASKVSSE--FPSLMAVKSCADCPPSSVTLKNEKE 53
E LR V+G G +G V A K+ + M V++ D + K E+
Sbjct: 20 ELLR--VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT----KAERN 73
Query: 54 ALDQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRY 113
L+++ P IV Y+F+ G + Y L+LEY S G L +++++ G E Y
Sbjct: 74 ILEEVK-HPFIVDLI---YAFQTGGKLY-LILEYLSGGELFMQLERE--GIFMEDTACFY 126
Query: 114 TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGT 173
+ L H+H KG ++ D+K +N+++ K+ DFGL K+S DG + F C GT
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF-C-GT 184
Query: 174 PLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPN 233
YM+PE + + + D W+LG + +M +G P + + +++ + N
Sbjct: 185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKL-----N 239
Query: 234 IPGDLSEQGKDFLIKCFLKDPKRRWTA 260
+P L+++ +D L K ++ R A
Sbjct: 240 LPPYLTQEARDLLKKLLKRNAASRLGA 266
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 120/274 (43%), Gaps = 23/274 (8%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSV-----TLKNEKEALDQIGIC 61
DVIG G V EF + + P + + E L Q+
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P I+ D Y + F L+ + +G L D + ++ L E + + RS+L+ +
Sbjct: 160 PHIITLI-DSY---ESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAV 213
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF-ECRGTPLYMSPE 180
+H+ VH D+K +N+L+ DN + +++DFG SC E + E GTP Y++PE
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGF----SCHLEPGEKLRELCGTPGYLAPE 269
Query: 181 ----SVNENE--YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
S++E Y D+WA G + + +G P + H++ + +++ P
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW 329
Query: 235 PGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
D S KD + + DP+ R TAE L HPF
Sbjct: 330 -DDRSSTVKDLISRLLQVDPEARLTAEQALQHPF 362
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EYA G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+++ ++ DFGLAK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EYA G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+++ K+ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLXGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EYA G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYAPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+++ K+ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 14/218 (6%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAV--KSCADCPPSSVTLKNEKEALDQIG 59
+W +G G+ G V LA ++V+ E ++ V K DCP + +K E ++++
Sbjct: 7 DWDLVQTLGEGAAGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPEN---IKKEI-CINKML 61
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+V+ +G +G Y L LEY S G L DR++ + E D +R+ ++
Sbjct: 62 NHENVVKFYGHR---REGNIQY-LFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 115
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ ++H G H DIK +N+L+ + D KI+DFGLA + + GT Y++P
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDS 216
E + E+ A P D+W+ G + M +G+ W+ DS
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLAGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 32 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 89
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 90 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 143
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ + ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 144 LHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 198
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 253
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 254 DLLRNLLQVDLTKRF 268
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 19/273 (6%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+ R +G G++G V L K +E + KS +S L +E L Q+ P
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HP 81
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I++ Y F + +R Y L++E G L D + + + E D + +L G
Sbjct: 82 NIMKL----YEFFEDKRNYYLVMEVYRGGELFDEIILRQ--KFSEVDAAVIMKQVLSGTT 135
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
++H VH D+K +N+L+ KI DFGL+ G+ + GT Y++P
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---GTAYYIAP 192
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIP--GD 237
E V +Y+ CD+W+ G + + G P + + D + L R+ G + P
Sbjct: 193 E-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI---LKRVEKGKFSFDPPDWTQ 248
Query: 238 LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
+S++ K + +P +R +AE LNHP++
Sbjct: 249 VSDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 281
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 19/273 (6%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+ R +G G++G V L K +E + KS +S L +E L Q+ P
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HP 64
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I++ Y F + +R Y L++E G L D + + + E D + +L G
Sbjct: 65 NIMKL----YEFFEDKRNYYLVMEVYRGGELFDEIILRQ--KFSEVDAAVIMKQVLSGTT 118
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
++H VH D+K +N+L+ KI DFGL+ G+ + GT Y++P
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---GTAYYIAP 175
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIP--GD 237
E V +Y+ CD+W+ G + + G P + + D + L R+ G + P
Sbjct: 176 E-VLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEI---LKRVEKGKFSFDPPDWTQ 231
Query: 238 LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
+S++ K + +P +R +AE LNHP++
Sbjct: 232 VSDEAKQLVKLMLTYEPSKRISAEEALNHPWIV 264
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EYA G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+++ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 40 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 97
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 98 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 151
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 152 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 206
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 261
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 262 DLLRNLLQVDLTKRF 276
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 38 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 95
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 96 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 149
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 204
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 259
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 260 DLLRNLLQVDLTKRF 274
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 38 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 95
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 96 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 149
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 150 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 204
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 259
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 260 DLLRNLLQVDLTKRF 274
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 104 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+ + ++SF+ Y +++EYA G + +++ GR E + Y ++ +
Sbjct: 104 LTKL---EFSFKDNSNLY-MVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+++ K+ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G GSFG V L++ + + K EK L G P + +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F+ +R Y ++EY + G L + Q GR +E Y + GL + SK
Sbjct: 87 HS---CFQTMDRLY-FVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
G ++ D+KL NV++ KIADFG+ K++ DG ++ F C GTP Y++PE + Y
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF-C-GTPDYIAPEIIAYQPY 198
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D WA G + EM +G+ + + + +F ++ V P +S++
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-----YPKSMSKEAVAICK 253
Query: 248 KCFLKDPKRR 257
K P +R
Sbjct: 254 GLMTKHPGKR 263
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+ + ++SF+ Y +++EYA G + +++ GR E + Y ++ +
Sbjct: 104 LTKL---EFSFKDNSNLY-MVMEYAPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+++ K+ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 104 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+ + ++SF+ Y +++EYA G + +++ GR E + Y ++ +
Sbjct: 104 LTKL---EFSFKDNSNLY-MVMEYAPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+++ K+ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 31 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 88
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 89 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 142
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 143 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPEIIL 197
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 252
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 253 DLLRNLLQVDLTKRF 267
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 22/265 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G GSFG V+L + S+ + + ++ +K V N++ + I P I+R
Sbjct: 13 TLGTGSFGRVHLIR-SRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
+G +F+ ++ + ++++Y G L ++K R K Y + L ++HSK
Sbjct: 72 WG---TFQDAQQIF-MIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK 125
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
++ D+K +N+L+ N KI DFG AK ++ GTP Y++PE V+ Y
Sbjct: 126 DIIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIAPEVVSTKPY 180
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D W+ G + EM +G + DSN +I + EL P +E KD L
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTPF---YDSNTMKTYEKI-LNAEL-RFPPFFNEDVKDLLS 235
Query: 248 KCFLKDPKRRW-----TAEMLLNHP 267
+ +D +R E + NHP
Sbjct: 236 RLITRDLSQRLGNLQNGTEDVKNHP 260
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 104 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 16/269 (5%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G +G G FG+V LA+ + + KS + L+ E E + P I+
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNIL 77
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
R + F +R Y L+LE+A RG L + Q +GR E + + L + H
Sbjct: 78 RMYN---YFHDRKRIY-LMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCH 131
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
+ +H DIK +N+L+ E KIADFG + + R GT Y+ PE +
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGK 187
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
++ D+W G E G P ++ + ++ + + P LS+ KD
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-----KFPPFLSDGSKDL 242
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
+ K P +R + ++ HP+V A+ +
Sbjct: 243 ISKLLRYHPPQRLPLKGVMEHPWVKANSR 271
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 25/274 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG GS+ + EF + KS D P+ E E L + G P I+
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD--PT-----EEIEILLRYGQHPNII-TL 81
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
D Y + G+ Y ++ E G L D++ +Q +E+ +T + K + ++H++G
Sbjct: 82 KDVY--DDGKYVY-VVTELMKGGELLDKILRQKFFSEREASAVLFT--ITKTVEYLHAQG 136
Query: 129 FVHCDIKLQNVLVFDN----DEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
VH D+K N+L D + +I DFG AK+ E T +++PE +
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ--LRAENGLLMTPCYTANFVAPEVLER 194
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG----DLSE 240
Y+A CDIW+LG + M +G + + D +L RIG G ++ G +S+
Sbjct: 195 QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF--SLSGGYWNSVSD 252
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
KD + K DP +R TA ++L HP++ DQ
Sbjct: 253 TAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ 286
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 66 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 123
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 124 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 177
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 232
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 287
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 288 DLLRNLLQVDLTKRF 302
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 16/269 (5%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G +G G FG+V LA+ + + KS + L+ E E + P I+
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNIL 78
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
R + F +R Y L+LE+A RG L + Q +GR E + + L + H
Sbjct: 79 RMYN---YFHDRKRIY-LMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCH 132
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
+ +H DIK +N+L+ E KIADFG + + R GT Y+ PE +
Sbjct: 133 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGK 188
Query: 186 EYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
++ D+W G E G P ++ + ++ + + P LS+ KD
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-----KFPPFLSDGSKDL 243
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
+ K P +R + ++ HP+V A+ +
Sbjct: 244 ISKLLRYHPPQRLPLKGVMEHPWVKANSR 272
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 104 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 104 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 123/266 (46%), Gaps = 16/266 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPS--LMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR 66
+G G F V + E+ + L + DC + +E L+ CP+++
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDC---RAEILHEIAVLELAKSCPRVIN 93
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
+E L+LEYA+ G + + + E+DV R + +L+G+ ++H
Sbjct: 94 LHE---VYENTSEII-LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 127 KGFVHCDIKLQNVL---VFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
VH D+K QN+L ++ + KI DFG+++K G + E GTP Y++PE +N
Sbjct: 150 NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI---GHACELREIMGTPEYLAPEILN 206
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
+ D+W +G + + + + + + + ++ V D +S+
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV-DYSEETFSSVSQLAT 265
Query: 244 DFLIKCFLKDPKRRWTAEMLLNHPFV 269
DF+ +K+P++R TAE+ L+H ++
Sbjct: 266 DFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFAEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 104 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 46 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 103
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 104 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 157
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTLCGTPEYLAPEIIL 212
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 267
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 268 DLLRNLLQVDLTKRF 282
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 66 RIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 123
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 124 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 177
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 232
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 287
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 288 DLLRNLLQVDLTKRF 302
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 21/268 (7%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G GSFG V L K E + K +L E + L Q+ P I++
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKL 91
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y F + + ++ L+ E + G L D + + R E D R R +L G+ ++H
Sbjct: 92 ----YEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN 145
Query: 128 GFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECR-GTPLYMSPESVN 183
VH D+K +N+L+ + +I DFGL S E S+ + + GT Y++PE V
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGL----STHFEASKKMKDKIGTAYYIAPE-VL 200
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIP--GDLSEQ 241
Y+ CD+W+ G + + SG P +N +N + +L ++ G +P +SE
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILKKVEKGKYTFELPQWKKVSES 257
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
KD + K P R +A L+H ++
Sbjct: 258 AKDLIRKMLTYVPSMRISARDALDHEWI 285
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 21/268 (7%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G GSFG V L K E + K +L E + L Q+ P I++
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKL 97
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y F + + ++ L+ E + G L D + + R E D R R +L G+ ++H
Sbjct: 98 ----YEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN 151
Query: 128 GFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECR-GTPLYMSPESVN 183
VH D+K +N+L+ + +I DFGL S E S+ + + GT Y++PE V
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGL----STHFEASKKMKDKIGTAYYIAPE-VL 206
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIP--GDLSEQ 241
Y+ CD+W+ G + + SG P +N +N + +L ++ G +P +SE
Sbjct: 207 HGTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILKKVEKGKYTFELPQWKKVSES 263
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
KD + K P R +A L+H ++
Sbjct: 264 AKDLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVPGGEMFSHLRRI--GRFXEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 21/268 (7%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G GSFG V L K E + K +L E + L Q+ P I++
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKL 114
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y F + + ++ L+ E + G L D + + R E D R R +L G+ ++H
Sbjct: 115 ----YEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN 168
Query: 128 GFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECR-GTPLYMSPESVN 183
VH D+K +N+L+ + +I DFGL S E S+ + + GT Y++PE V
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGL----STHFEASKKMKDKIGTAYYIAPE-VL 223
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIP--GDLSEQ 241
Y+ CD+W+ G + + SG P +N +N + +L ++ G +P +SE
Sbjct: 224 HGTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILKKVEKGKYTFELPQWKKVSES 280
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
KD + K P R +A L+H ++
Sbjct: 281 AKDLIRKMLTYVPSMRISARDALDHEWI 308
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 13/250 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G GSFG V L++ + + K EK L G P + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F+ +R Y ++EY + G L + Q GR +E Y + GL + SK
Sbjct: 408 HS---CFQTMDRLY-FVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
G ++ D+KL NV++ KIADFG+ K++ DG ++ F C GTP Y++PE + Y
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF-C-GTPDYIAPEIIAYQPY 519
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D WA G + EM +G+ + + + +F ++ V P +S++
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-----YPKSMSKEAVAICK 574
Query: 248 KCFLKDPKRR 257
K P +R
Sbjct: 575 GLMTKHPGKR 584
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 80
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 81 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 137
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 197
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 198 FSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 74
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 75 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 131
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 191
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 192 FSVASDVWSFGVVLYELFT 210
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 21/268 (7%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G GSFG V L K E + K +L E + L Q+ P I++
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKL 115
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y F + + ++ L+ E + G L D + + R E D R R +L G+ ++H
Sbjct: 116 ----YEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN 169
Query: 128 GFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECR-GTPLYMSPESVN 183
VH D+K +N+L+ + +I DFGL S E S+ + + GT Y++PE V
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGL----STHFEASKKMKDKIGTAYYIAPE-VL 224
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIP--GDLSEQ 241
Y+ CD+W+ G + + SG P +N +N + +L ++ G +P +SE
Sbjct: 225 HGTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILKKVEKGKYTFELPQWKKVSES 281
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
KD + K P R +A L+H ++
Sbjct: 282 AKDLIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 75
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 76 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 132
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 192
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 193 FSVASDVWSFGVVLYELFT 211
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 16/214 (7%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IVR D E+G F+ L+ + + G L + + + E+D +L+ +
Sbjct: 90 PNIVRL--HDSISEEG--FHYLVFDLVTGGELFEDIVARE--YYSEADASHCIHQILESV 143
Query: 122 RHIHSKGFVHCDIKLQNVLVFDN---DEAKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
HIH VH D+K +N+L+ K+ADFGLA + GE+ F GTP Y+S
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE--VQGEQQAWFGFAGTPGYLS 201
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPA-WNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE + ++ Y P DIWA G + + G P W+ +D + I+ G D P+ D
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILLVGYPPFWD--EDQHKLYQQIKAGAYD-FPSPEWD 258
Query: 238 -LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
++ + K+ + + +P +R TA+ L HP+VC
Sbjct: 259 TVTPEAKNLINQMLTINPAKRITADQALKHPWVC 292
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 107
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 108 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 164
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 224
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 225 FSVASDVWSFGVVLYELFT 243
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 66 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 123
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 124 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 177
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + ++ GTP Y++PE +
Sbjct: 178 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGATWTLCGTPEYLAPEIIL 232
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 287
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 288 DLLRNLLQVDLTKRF 302
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 76
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 77 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 133
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 81
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 82 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 138
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 198
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 199 FSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 83
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 84 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 140
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 200
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 201 FSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 76
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 77 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 133
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 94
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 95 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 151
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 212 FSVASDVWSFGVVLYELFT 230
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P+L +A+K+C +C SV K +EAL P
Sbjct: 15 GRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 73 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 126
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV ND K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 241
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 242 YSLMTKCWAYDPSRR 256
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 82
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 83 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 139
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 199
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 200 FSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 94
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 95 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 151
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 212 FSVASDVWSFGVVLYELFT 230
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IVR D E+G F+ L+ + + G L + + + E+D + +L+ +
Sbjct: 63 PNIVRL--HDSISEEG--FHYLVFDLVTGGELFEDIVARE--YYSEADASHCIQQILESV 116
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
H H G VH D+K +N+L+ + K+ADFGLA + G++ F GTP Y+S
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE--VQGDQQAWFGFAGTPGYLS 174
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPA-WNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE + ++ Y P D+WA G + + G P W+ +D + I+ G D P+ D
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD--EDQHRLYQQIKAGAYD-FPSPEWD 231
Query: 238 -LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
++ + KD + K +P +R TA L HP++C
Sbjct: 232 TVTPEAKDLINKMLTINPAKRITASEALKHPWIC 265
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+++ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIII 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 16/266 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG+V LA+ + + KS + L+ E E + P I+R +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMY 80
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
F +R Y L+LE+A RG L + Q +GR E + + L + H +
Sbjct: 81 N---YFHDRKRIY-LMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
+H DIK +N+L+ E KIADFG + + R GT Y+ PE + ++
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHD 190
Query: 189 APCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIK 248
D+W G E G P ++ + ++ + + P LS+ KD + K
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-----KFPPFLSDGSKDLISK 245
Query: 249 CFLKDPKRRWTAEMLLNHPFVCADDQ 274
P +R + ++ HP+V A+ +
Sbjct: 246 LLRYHPPQRLPLKGVMEHPWVKANSR 271
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 79
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 80 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 136
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P+L +A+K+C +C SV K +EAL P
Sbjct: 12 GRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 69
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 70 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 123
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV ND K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 182
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 183 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 238
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 239 YSLMTKCWAYDPSRR 253
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P+L +A+K+C +C SV K +EAL P
Sbjct: 20 GRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 77
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 78 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 131
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV ND K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 190
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 246
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 247 YSLMTKCWAYDPSRR 261
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P+L +A+K+C +C SV K +EAL P
Sbjct: 43 GRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 100
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 101 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 154
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV ND K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 155 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 213
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 214 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 269
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 270 YSLMTKCWAYDPSRR 284
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IVR D E+G F+ L+ + + G L + + + E+D + +L+ +
Sbjct: 63 PNIVRL--HDSISEEG--FHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQILESV 116
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
H H G VH D+K +N+L+ + K+ADFGLA + G++ F GTP Y+S
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE--VQGDQQAWFGFAGTPGYLS 174
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPA-WNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE + ++ Y P D+WA G + + G P W+ +D + I+ G D P+ D
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD--EDQHRLYQQIKAGAYD-FPSPEWD 231
Query: 238 -LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
++ + KD + K +P +R TA L HP++C
Sbjct: 232 TVTPEAKDLINKMLTINPAKRITASEALKHPWIC 265
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + +MA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 19/243 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFL 246
D L
Sbjct: 267 DLL 269
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + + ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P++ +A+K+C +C SV K +EAL P
Sbjct: 15 GRCIGEGQFGDVH--QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 73 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 126
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV ND K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 241
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 242 YSLMTKCWAYDPSRR 256
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P+L +A+K+C +C SV K +EAL P
Sbjct: 18 GRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 75
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 76 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 129
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV ND K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 130 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 188
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 189 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 244
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 245 YSLMTKCWAYDPSRR 259
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 45/290 (15%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G++G V AK S+ +L ++ A+ T E L ++ P IV
Sbjct: 29 VGEGTYGVVYKAKDSQ--GRIVALKRIRLDAEDEGIPSTAIREISLLKELH-HPNIVSLI 85
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
+S ER L+ E+ + +V +N LQ+S +K Y +L+G+ H H
Sbjct: 86 DVIHS----ERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESV-NENEY 187
+H D+K QN+L+ + K+ADFGLA+ RS + E T Y +P+ + +Y
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIP-VRSYTHEVV-TLWYRAPDVLMGSKKY 197
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSN----VFSLLIRIGVGD--------ELP--- 232
DIW++GC EM +GKP + D + +FS+L G + ELP
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL---GTPNPREWPQVQELPLWK 254
Query: 233 --------------NIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
IPG ++G D L DP +R +A +NHP+
Sbjct: 255 QRTFQVFEKKPWSSIIPG-FCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P+L +A+K+C +C SV K +EAL P
Sbjct: 17 GRCIGEGQFGDVH--QGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 74
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 75 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 128
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV ND K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 129 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 187
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 188 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 243
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 244 YSLMTKCWAYDPSRR 258
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 14/195 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE S G L D + ++ + L E + ++ + +L G+ ++HSK H D+K +N+++
Sbjct: 85 LILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 142
Query: 143 D----NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D N K+ DFG+A K E F GTP +++PE VN D+W++G
Sbjct: 143 DKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 199
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + KQ++ + +E + + SE KDF+ + +KDPKR
Sbjct: 200 ITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS---NTSELAKDFIRRLLVKDPKR 256
Query: 257 RWTAEMLLNHPFVCA 271
R T L H ++ A
Sbjct: 257 RMTIAQSLEHSWIKA 271
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 45/290 (15%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G++G V AK S+ +L ++ A+ T E L ++ P IV
Sbjct: 29 VGEGTYGVVYKAKDSQ--GRIVALKRIRLDAEDEGIPSTAIREISLLKELH-HPNIVSLI 85
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
+S ER L+ E+ + +V +N LQ+S +K Y +L+G+ H H
Sbjct: 86 DVIHS----ERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESV-NENEY 187
+H D+K QN+L+ + K+ADFGLA+ RS + E T Y +P+ + +Y
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIP-VRSYTHEVV-TLWYRAPDVLMGSKKY 197
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSN----VFSLLIRIGVGD--------ELP--- 232
DIW++GC EM +GKP + D + +FS+L G + ELP
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL---GTPNPREWPQVQELPLWK 254
Query: 233 --------------NIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
IPG ++G D L DP +R +A +NHP+
Sbjct: 255 QRTFQVFEKKPWSSIIPG-FCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P++ +A+K+C +C SV K +EAL P
Sbjct: 15 GRCIGEGQFGDVH--QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 73 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAY 126
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV ND K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESIN 185
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 241
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 242 YSLMTKCWAYDPSRR 256
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 76
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 77 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 133
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK 193
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP Y++P +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEYLAPAIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 20/272 (7%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+ R +G G++G V L + KV+ ++ ++ + S+ L E L + P
Sbjct: 39 YQRVKKLGSGAYGEVLLCR-DKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD-HP 96
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I++ Y F + +R Y L++E G L D + + + E D + +L G+
Sbjct: 97 NIMKL----YDFFEDKRNYYLVMECYKGGELFDEII--HRMKFNEVDAAVIIKQVLSGVT 150
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
++H VH D+K +N+L+ ++ KI DFGL S+ + + E GT Y++P
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGL---SAVFENQKKMKERLGTAYYIAP 207
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIP--GD 237
E V +Y+ CD+W++G + + +G P + + D + L ++ G + P +
Sbjct: 208 E-VLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI---LRKVEKGKYTFDSPEWKN 263
Query: 238 LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+SE KD + + D +RR +A+ L HP++
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 77
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++K R+ + +YT + KG+ ++ +K
Sbjct: 78 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 134
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H ++ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 194
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 195 FSVASDVWSFGVVLYELFT 213
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 125/280 (44%), Gaps = 25/280 (8%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
++ + IG GS+ + E+ + KS D PS E E L + G P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD--PS-----EEIEILLRYGQHP 81
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+ D Y + G+ Y L+ E G L D++ +Q E + ++ K +
Sbjct: 82 NII-TLKDVY--DDGKHVY-LVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVE 135
Query: 123 HIHSKGFVHCDIKLQNVLVFD---NDE-AKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
++HS+G VH D+K N+L D N E +I DFG AK+ E T +++
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ--LRAENGLLMTPCYTANFVA 193
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG-- 236
PE + Y+ CDIW+LG + M +G + + +L RIG G + G
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF--TLSGGN 251
Query: 237 --DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
+SE KD + K DP +R TA+ +L HP+V D+
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 125/280 (44%), Gaps = 25/280 (8%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
++ + IG GS+ + E+ + KS D PS E E L + G P
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD--PS-----EEIEILLRYGQHP 81
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+ D Y + G+ Y L+ E G L D++ +Q E + ++ K +
Sbjct: 82 NII-TLKDVY--DDGKHVY-LVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVE 135
Query: 123 HIHSKGFVHCDIKLQNVLVFD---NDE-AKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
++HS+G VH D+K N+L D N E +I DFG AK+ E T +++
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ--LRAENGLLMTPCYTANFVA 193
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG-- 236
PE + Y+ CDIW+LG + M +G + + +L RIG G + G
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKF--TLSGGN 251
Query: 237 --DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
+SE KD + K DP +R TA+ +L HP+V D+
Sbjct: 252 WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDK 291
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 25/274 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG GS+ + EF + KS D P+ E E L + G P I+
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRD--PT-----EEIEILLRYGQHPNII-TL 81
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
D Y + G+ Y ++ E G L D++ +Q +E+ +T + K + ++H++G
Sbjct: 82 KDVY--DDGKYVY-VVTELXKGGELLDKILRQKFFSEREASAVLFT--ITKTVEYLHAQG 136
Query: 129 FVHCDIKLQNVLVFDN----DEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
VH D+K N+L D + +I DFG AK+ + + C T +++PE +
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT-PCY-TANFVAPEVLER 194
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG----DLSE 240
Y+A CDIW+LG + +G + + D +L RIG G ++ G +S+
Sbjct: 195 QGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKF--SLSGGYWNSVSD 252
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
KD + K DP +R TA ++L HP++ DQ
Sbjct: 253 TAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQ 286
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 21/260 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIV 65
IG G+F V LA+ E +AVK +S +L+ + + + P IV
Sbjct: 21 TIGKGNFAKVKLARHILTGKE----VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ F + E+ L++EYAS G + D + +GR++E + + R ++ +++ H
Sbjct: 77 KLF----EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCH 130
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
K VH D+K +N+L+ + KIADFG + + + G + +F C G+P Y +PE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTF-C-GSPPYAAPELFQGK 187
Query: 186 EYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
+Y+ P D+W+LG + + SG ++ N+ L R+ G IP +S ++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFD---GQNLKELRERVLRGKY--RIPFYMSTDCEN 242
Query: 245 FLIKCFLKDPKRRWTAEMLL 264
L K + +P +R T E ++
Sbjct: 243 LLKKFLILNPSKRGTLEQIM 262
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 21/260 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIV 65
IG G+F V LA+ E +AVK +S +L+ + + + P IV
Sbjct: 21 TIGKGNFAKVKLARHILTGKE----VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ F + E+ L++EYAS G + D + +GR++E + + R ++ +++ H
Sbjct: 77 KLF----EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCH 130
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
K VH D+K +N+L+ + KIADFG + + + G + +F C G+P Y +PE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTF-C-GSPPYAAPELFQGK 187
Query: 186 EYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
+Y+ P D+W+LG + + SG ++ N+ L R+ G IP +S ++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFD---GQNLKELRERVLRGKY--RIPFYMSTDCEN 242
Query: 245 FLIKCFLKDPKRRWTAEMLL 264
L K + +P +R T E ++
Sbjct: 243 LLKKFLILNPSKRGTLEQIM 262
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 130/265 (49%), Gaps = 17/265 (6%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
IG G+F V LA+ E + + P+S+ + + +I P IV+
Sbjct: 19 TIGKGNFAKVKLARHILTGREVA--IKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 76
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F + E+ L++EYAS G + D + +GR++E + + R ++ +++ H K
Sbjct: 77 F----EVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
VH D+K +N+L+ + KIADFG + + + G + +F C G+P Y +PE +Y
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-KLDTF-C-GSPPYAAPELFQGKKY 187
Query: 188 EAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFL 246
+ P D+W+LG + + SG ++ + N+ L R+ G IP +S ++ L
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDGQ---NLKELRERVLRGKY--RIPFYMSTDCENLL 242
Query: 247 IKCFLKDPKRRWTAEMLLNHPFVCA 271
+ + +P +R T E ++ ++ A
Sbjct: 243 KRFLVLNPIKRGTLEQIMKDRWINA 267
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKS---CADCPPSSVTLKNEKEALDQIGICPQ 63
+ IG G F V LA ++ E ++ + +D P +K E EAL +
Sbjct: 16 ETIGTGGFAKVKLA-CHILTGEMVAIKIMDKNTLGSDLP----RIKTEIEALKNLR-HQH 69
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
I + + + E + + ++LEY G L D + Q+ RL E + + R ++ + +
Sbjct: 70 ICQLY---HVLETANKIF-MVLEYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAY 123
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE-CRGTPLYMSPESV 182
+HS+G+ H D+K +N+L + + K+ DFGL K G + + C G+ Y +PE +
Sbjct: 124 VHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK--GNKDYHLQTCCGSLAYAAPELI 181
Query: 183 NENEY-EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQ 241
Y + D+W++G + + G ++ D NV +L +I G ++P LS
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFD---DDNVMALYKKIMRGKY--DVPKWLSPS 236
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
L + DPK+R + + LLNHP++ D
Sbjct: 237 SILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 21/268 (7%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G GSFG V L K E + K +L E + L Q+ P I +
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIXKL 91
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y F + + ++ L+ E + G L D + + R E D R R +L G+ + H
Sbjct: 92 ----YEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYXHKN 145
Query: 128 GFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECR-GTPLYMSPESVN 183
VH D+K +N+L+ + +I DFGL S E S+ + + GT Y++PE V
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGL----STHFEASKKXKDKIGTAYYIAPE-VL 200
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIP--GDLSEQ 241
Y+ CD+W+ G + + SG P +N +N + +L ++ G +P +SE
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFN---GANEYDILKKVEKGKYTFELPQWKKVSES 257
Query: 242 GKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
KD + K P R +A L+H ++
Sbjct: 258 AKDLIRKXLTYVPSXRISARDALDHEWI 285
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IVR D E+G + L+ + + G L + + + E+D + +L+ +
Sbjct: 81 PNIVRL--HDSISEEGHHY--LIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAV 134
Query: 122 RHIHSKGFVHCDIKLQNVLV---FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
H H G VH D+K +N+L+ K+ADFGLA + +GE+ F GTP Y+S
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGTPGYLS 192
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPA-WNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE + ++ Y P D+WA G + + G P W+ +D + I+ G D P+ D
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD--EDQHRLYQQIKAGAYD-FPSPEWD 249
Query: 238 -LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
++ + KD + K +P +R TA L HP++
Sbjct: 250 TVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 79
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++EY GSL D ++ R+ + +YT + KG+ ++ +K
Sbjct: 80 KGVCYS--AGRRNLKLIMEYLPYGSLRDYLQAHAE-RIDHIKLLQYTSQICKGMEYLGTK 136
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 21/260 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIV 65
IG G+F V LA+ E +AVK +S +L+ + + + P IV
Sbjct: 21 TIGKGNFAKVKLARHILTGKE----VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ F + E+ L++EYAS G + D + +GR++E + + R ++ +++ H
Sbjct: 77 KLF----EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCH 130
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
K VH D+K +N+L+ + KIADFG + + + G + +F C G P Y +PE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDAF-C-GAPPYAAPELFQGK 187
Query: 186 EYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
+Y+ P D+W+LG + + SG ++ N+ L R+ G IP +S ++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFD---GQNLKELRERVLRGKY--RIPFYMSTDCEN 242
Query: 245 FLIKCFLKDPKRRWTAEMLL 264
L K + +P +R T E ++
Sbjct: 243 LLKKFLILNPSKRGTLEQIM 262
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVRC 67
+G G+FGSV + + + ++AVK + + E E L + IV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 79
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G YS G R L++E+ GSL + ++K R+ + +YT + KG+ ++ +K
Sbjct: 80 KGVCYS--AGRRNLKLIMEFLPYGSLREYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTK 136
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H D+ +N+LV + + KI DFGL K D E + E +P++ +PES+ E++
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 129/260 (49%), Gaps = 21/260 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIV 65
IG G+F V LA+ E +AV+ +S +L+ + + + P IV
Sbjct: 21 TIGKGNFAKVKLARHILTGKE----VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ F + E+ L++EYAS G + D + +GR++E + + R ++ +++ H
Sbjct: 77 KLF----EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCH 130
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
K VH D+K +N+L+ + KIADFG + + + G + +F C G+P Y +PE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTF-C-GSPPYAAPELFQGK 187
Query: 186 EYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
+Y+ P D+W+LG + + SG ++ + N+ L R+ G IP +S ++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQ---NLKELRERVLRGKY--RIPFYMSTDCEN 242
Query: 245 FLIKCFLKDPKRRWTAEMLL 264
L K + +P +R T E ++
Sbjct: 243 LLKKFLILNPSKRGTLEQIM 262
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPAFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 263 RMTIQDSLQHPWIKPKD 279
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 14/195 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE S G L D + ++ + L E + ++ + +L G+ ++HSK H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 149
Query: 143 D----NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D N K+ DFG+A K E F GTP +++PE VN D+W++G
Sbjct: 150 DKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + KQ++ + +E + + SE KDF+ + +KDPKR
Sbjct: 207 ITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS---NTSELAKDFIRRLLVKDPKR 263
Query: 257 RWTAEMLLNHPFVCA 271
R L H ++ A
Sbjct: 264 RMXIAQSLEHSWIKA 278
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 96/195 (49%), Gaps = 14/195 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE S G L D + ++ + L E + ++ + +L G+ ++HSK H D+K +N+++
Sbjct: 106 LILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 163
Query: 143 D----NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D N K+ DFG+A K E F GTP +++PE VN D+W++G
Sbjct: 164 DKNVPNPRIKLIDFGIAHKIEAGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 220
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + KQ++ + +E + + SE KDF+ + +KDPKR
Sbjct: 221 ITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS---NTSELAKDFIRRLLVKDPKR 277
Query: 257 RWTAEMLLNHPFVCA 271
R L H ++ A
Sbjct: 278 RMXIAQSLEHSWIKA 292
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 5 RGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
R +G GSFG V L K + + + ++ + TL NEK L + P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTL-NEKRILQAVNF-PF 102
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++SF+ Y +++EY + G + +++ GR E + Y ++ +
Sbjct: 103 LVKL---EFSFKDNSNLY-MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+HS ++ D+K +N+L+ ++ DFG AK+ + +++ GTP ++PE +
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXLCGTPEALAPEIIL 211
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y D WALG + EMA+G P + Q ++ ++ V P S K
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-----RFPSHFSSDLK 266
Query: 244 DFLIKCFLKDPKRRW 258
D L D +R+
Sbjct: 267 DLLRNLLQVDLTKRF 281
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P++ +A+K+C +C SV K +EAL P
Sbjct: 395 GRCIGEGQFGDVH--QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 452
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 453 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAY 506
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV ND K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 507 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 565
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 621
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 622 YSLMTKCWAYDPSRR 636
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 263 RMTIQDSLQHPWIKPKD 279
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 263 RMTIQDSLQHPWIKPKD 279
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 90 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 147
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 148 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 205 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 261
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 262 RMTIQDSLQHPWIKPKD 278
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 263 RMTIQDSLQHPWIKPKD 279
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 90 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 147
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 148 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 205 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 261
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 262 RMTIQDSLQHPWIKPKD 278
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 263 RMTIQDSLQHPWIKPKD 279
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%), Gaps = 17/265 (6%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
IG G+F V LA+ E + + P+S+ + + +I P IV+
Sbjct: 22 TIGKGNFAKVKLARHILTGREVA--IKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F + E+ L++EYAS G + D + +GR++E + + R ++ +++ H K
Sbjct: 80 F----EVIETEKTLYLIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
VH D+K +N+L+ + KIADFG + + + G + +F C G P Y +PE +Y
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-KLDAF-C-GAPPYAAPELFQGKKY 190
Query: 188 EAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFL 246
+ P D+W+LG + + SG ++ N+ L R+ G IP +S ++ L
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFD---GQNLKELRERVLRGKY--RIPFYMSTDCENLL 245
Query: 247 IKCFLKDPKRRWTAEMLLNHPFVCA 271
+ + +P +R T E ++ ++ A
Sbjct: 246 KRFLVLNPIKRGTLEQIMKDRWINA 270
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 263 RMTIQDSLQHPWIKPKD 279
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 263 RMTIQDSLQHPWIKPKD 279
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 23/270 (8%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR-- 66
+G G+FG V+ F +A P T+KNE ++Q+ P+++
Sbjct: 59 LGSGAFGVVHRCVEKATGRVF---VAKFINTPYPLDKYTVKNEISIMNQLH-HPKLINLH 114
Query: 67 -CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
F D Y L+LE+ S G L DR+ ++ ++ E++V Y R +GL+H+H
Sbjct: 115 DAFEDKYEM-------VLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMH 166
Query: 126 SKGFVHCDIKLQNVL--VFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
VH DIK +N++ KI DFGLA K + D + T + +PE V+
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT---TATAEFAAPEIVD 223
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIG-VGDELPNIPGDLSEQG 242
D+WA+G + SG + + D + R DE + +S +
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE--DAFSSVSPEA 281
Query: 243 KDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
KDF+ K+P++R T L HP++ D
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 263 RMTIQDSLQHPWIKPKD 279
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P++ +A+K+C +C SV K +EAL P
Sbjct: 15 GRCIGEGQFGDVH--QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 73 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAY 126
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV D K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 127 LESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 186 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 241
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 242 YSLMTKCWAYDPSRR 256
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 78 ERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQ 137
E F+ L+ + + G L + + + E+D + +L+ + H H G VH D+K +
Sbjct: 75 EGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAVLHCHQMGVVHRDLKPE 132
Query: 138 NVLVFDN---DEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIW 194
N+L+ K+ADFGLA + G++ F GTP Y+SPE + + Y P DIW
Sbjct: 133 NLLLASKCKGAAVKLADFGLAIE--VQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIW 190
Query: 195 ALGCAVVEMASGKPA-WNHKQDSNVFSLLIRIGVGDELPNIPGD-LSEQGKDFLIKCFLK 252
A G + + G P W+ +D + I+ G D P+ D ++ + K+ + +
Sbjct: 191 ACGVILYILLVGYPPFWD--EDQHKLYQQIKAGAYD-FPSPEWDTVTPEAKNLINQMLTI 247
Query: 253 DPKRRWTAEMLLNHPFVC 270
+P +R TA L HP+VC
Sbjct: 248 NPAKRITAHEALKHPWVC 265
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 263 RMTIQDSLQHPWIKPKD 279
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 37/279 (13%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI------CP 62
IG G++GSVN V +MAVK S+V K +K+ L + + CP
Sbjct: 30 IGRGAYGSVN----KMVHKPSGQIMAVKRIR----STVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
IV+ +G F +G+ + + L S V + + E + + T + +K L
Sbjct: 82 YIVQFYGA--LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 123 HIHSK-GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
H+ +H DIK N+L+ + K+ DFG++ + +++ CR YM+PE
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRP---YMAPER 196
Query: 182 VNENE----YEAPCDIWALGCAVVEMASGK---PAWNHKQDSNVFSLLIRIGVGDELPNI 234
++ + Y+ D+W+LG + E+A+G+ P WN +VF L ++ GD P +
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN-----SVFDQLTQVVKGDP-PQL 250
Query: 235 PG----DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+ S +F+ C KD +R + LL HPF+
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IVR D E+G + L+ + + G L + + + E+D + +L+ +
Sbjct: 70 PNIVRL--HDSISEEGHHY--LIFDLVTGGELFEDIVAREY--YSEADASHCIQQILEAV 123
Query: 122 RHIHSKGFVHCDIKLQNVLV---FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
H H G VH ++K +N+L+ K+ADFGLA + +GE+ F GTP Y+S
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGTPGYLS 181
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPA-WNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE + ++ Y P D+WA G + + G P W+ +D + I+ G D P+ D
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD--EDQHRLYQQIKAGAYD-FPSPEWD 238
Query: 238 -LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
++ + KD + K +P +R TA L HP++
Sbjct: 239 TVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 128/260 (49%), Gaps = 21/260 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIV 65
IG G+F V LA+ E +AV+ +S +L+ + + + P IV
Sbjct: 21 TIGKGNFAKVKLARHILTGKE----VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIV 76
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ F + E+ L++EYAS G + D + +GR++E + + R ++ +++ H
Sbjct: 77 KLF----EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCH 130
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
K VH D+K +N+L+ + KIADFG + + + G + F C G+P Y +PE
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDEF-C-GSPPYAAPELFQGK 187
Query: 186 EYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
+Y+ P D+W+LG + + SG ++ + N+ L R+ G IP +S ++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFDGQ---NLKELRERVLRGKY--RIPFYMSTDCEN 242
Query: 245 FLIKCFLKDPKRRWTAEMLL 264
L K + +P +R T E ++
Sbjct: 243 LLKKFLILNPSKRGTLEQIM 262
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFV 269
R T + L HP++
Sbjct: 263 RMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 14/193 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFV 269
R T + L HP++
Sbjct: 263 RMTIQDSLQHPWI 275
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 22/259 (8%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPP--SSVTLKN-EKEALDQIGICPQ 63
D +G G +V LA+ + ++ + +A+K+ PP TLK E+E + + Q
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIK----VAIKAIF-IPPREKEETLKRFEREVHNSSQLSHQ 71
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+ D ++ + Y L++EY +L++ + +++G L +T +L G++H
Sbjct: 72 NIVSMID---VDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKH 126
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
H VH DIK QN+L+ N KI DFG+AK S + +Q+ GT Y SPE
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAK 185
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG----DLS 239
+ DI+++G + EM G+P +N S+ I+ + D +PN+ D+
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPPFN---GETAVSIAIK-HIQDSVPNVTTDVRKDIP 241
Query: 240 EQGKDFLIKCFLKDPKRRW 258
+ + +++ KD R+
Sbjct: 242 QSLSNVILRATEKDKANRY 260
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 117/231 (50%), Gaps = 23/231 (9%)
Query: 47 TLKNEKEALDQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQ 106
TLK E + L ++ P I++ D Y + F+ L+ + +G L D + ++ L
Sbjct: 57 TLK-EVDILRKVSGHPNIIQ-LKDTY---ETNTFFFLVFDLMKKGELFDYLTEKVT--LS 109
Query: 107 ESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
E + ++ R++L+ + +H VH D+K +N+L+ D+ K+ DFG SC + +
Sbjct: 110 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF----SCQLDPGE 165
Query: 167 SF-ECRGTPLYMSPE----SVNENE--YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
E GTP Y++PE S+N+N Y D+W+ G + + +G P + H++ +
Sbjct: 166 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 225
Query: 220 SLLIRIGVGDELPNIP--GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+++ G+ P D S+ KD + + + P++R+TAE L HPF
Sbjct: 226 RMIMS---GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 273
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 120/233 (51%), Gaps = 27/233 (11%)
Query: 47 TLKNEKEALDQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQ 106
TLK E + L ++ P I++ D Y + F+ L+ + +G L D + ++ L
Sbjct: 70 TLK-EVDILRKVSGHPNIIQ-LKDTY---ETNTFFFLVFDLMKKGELFDYLTEKVT--LS 122
Query: 107 ESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCD---GE 163
E + ++ R++L+ + +H VH D+K +N+L+ D+ K+ DFG SC GE
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF----SCQLDPGE 178
Query: 164 RSQSFECRGTPLYMSPE----SVNENE--YEAPCDIWALGCAVVEMASGKPAWNHKQDSN 217
+ +S C GTP Y++PE S+N+N Y D+W+ G + + +G P + H++
Sbjct: 179 KLRSV-C-GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 218 VFSLLIRIGVGDELPNIP--GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ +++ G+ P D S+ KD + + + P++R+TAE L HPF
Sbjct: 237 MLRMIMS---GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 17/272 (6%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+ V+G G G V + +F A+K DCP + + E E + CP
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKF----ALKXLQDCPKA----RREVELHWRASQCPH 116
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR + G + ++ E G L R++ + + E + +S+ + +++
Sbjct: 117 IVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQY 176
Query: 124 IHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+HS H D+K +N+L N K+ DFG AK+++ S + C TP Y++PE
Sbjct: 177 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--SHNSLTTPCY-TPYYVAPE 233
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GD 237
+ +Y+ CD W+LG + G P + + RI G E PN +
Sbjct: 234 VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSE 293
Query: 238 LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+SE+ K + +P +R T NHP++
Sbjct: 294 VSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 117/231 (50%), Gaps = 23/231 (9%)
Query: 47 TLKNEKEALDQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQ 106
TLK E + L ++ P I++ D Y + F+ L+ + +G L D + ++ L
Sbjct: 70 TLK-EVDILRKVSGHPNIIQ-LKDTY---ETNTFFFLVFDLMKKGELFDYLTEKVT--LS 122
Query: 107 ESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
E + ++ R++L+ + +H VH D+K +N+L+ D+ K+ DFG SC + +
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF----SCQLDPGE 178
Query: 167 SF-ECRGTPLYMSPE----SVNENE--YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
E GTP Y++PE S+N+N Y D+W+ G + + +G P + H++ +
Sbjct: 179 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 220 SLLIRIGVGDELPNIP--GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+++ G+ P D S+ KD + + + P++R+TAE L HPF
Sbjct: 239 RMIMS---GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 286
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 14/216 (6%)
Query: 62 PQIVRCFGDDY-SFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P IV C D Y + G+R +++E G L R++++ + E + R +
Sbjct: 82 PHIV-CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 140
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
++ +HS H D+K +N+L ++ K+ DFG AK+++ + ++ + TP Y+
Sbjct: 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYV 196
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGDE-LPNIP 235
+PE + +Y+ CD+W+LG + + G P + + + RI +G PN
Sbjct: 197 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256
Query: 236 -GDLSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
++SE K LI+ LK DP R T +NHP++
Sbjct: 257 WSEVSEDAKQ-LIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 129/270 (47%), Gaps = 24/270 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAK----ASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQ 57
++ GD +G G+FG V + + KV+ + + ++S ++N K
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK----- 66
Query: 58 IGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM 117
+ P I++ Y + +++EY S G L D + K +GR++E + +R + +
Sbjct: 67 LFRHPHIIKL----YQVISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEARRLFQQI 120
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
L + + H VH D+K +NVL+ + AKIADFGL+ S DGE ++ C G+P Y
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRT-SC-GSPNYA 177
Query: 178 SPESVNENEYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PE ++ Y P DIW+ G + + G ++ D +V +L +I G + IP
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD---DEHVPTLFKKIRGG--VFYIPE 232
Query: 237 DLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
L+ L+ DP +R T + + H
Sbjct: 233 YLNRSVATLLMHMLQVDPLKRATIKDIREH 262
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 14/216 (6%)
Query: 62 PQIVRCFGDDY-SFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P IV C D Y + G+R +++E G L R++++ + E + R +
Sbjct: 63 PHIV-CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 121
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
++ +HS H D+K +N+L ++ K+ DFG AK+++ + ++ + TP Y+
Sbjct: 122 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY----TPYYV 177
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGDE-LPNIP 235
+PE + +Y+ CD+W+LG + + G P + + + RI +G PN
Sbjct: 178 APEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 237
Query: 236 -GDLSEQGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
++SE K LI+ LK DP R T +NHP++
Sbjct: 238 WSEVSEDAKQ-LIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 111/254 (43%), Gaps = 12/254 (4%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG G+FG V + K + + K + + E++ L G C I
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITAL 139
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y+F+ Y L+++Y G L + K + +L E + Y M+ + IH
Sbjct: 140 ---HYAFQDENHLY-LVMDYYVGGDLLTLLSKFED-KLPEDMARFYIGEMVLAIDSIHQL 194
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE- 186
+VH DIK NVL+ N ++ADFG K + DG QS GTP Y+SPE + E
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG-TVQSSVAVGTPDYISPEILQAMED 253
Query: 187 ----YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
Y CD W+LG + EM G+ + + + ++ + P+ D+SE+
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEA 313
Query: 243 KDFLIKCFLKDPKR 256
KD + + +R
Sbjct: 314 KDLIQRLICSRERR 327
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 111/254 (43%), Gaps = 12/254 (4%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG G+FG V + K + + K + + E++ L G C I
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITAL 155
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y+F+ Y L+++Y G L + K + +L E + Y M+ + IH
Sbjct: 156 ---HYAFQDENHLY-LVMDYYVGGDLLTLLSKFED-KLPEDMARFYIGEMVLAIDSIHQL 210
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE- 186
+VH DIK NVL+ N ++ADFG K + DG QS GTP Y+SPE + E
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG-TVQSSVAVGTPDYISPEILQAMED 269
Query: 187 ----YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
Y CD W+LG + EM G+ + + + ++ + P+ D+SE+
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEA 329
Query: 243 KDFLIKCFLKDPKR 256
KD + + +R
Sbjct: 330 KDLIQRLICSRERR 343
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 24/270 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAK----ASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQ 57
++ GD +G G+FG V + + KV+ + + ++S ++N K
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK----- 66
Query: 58 IGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM 117
+ P I++ Y + +++EY S G L D + K +GR++E + +R + +
Sbjct: 67 LFRHPHIIKL----YQVISTPTDFFMVMEYVSGGELFDYICK--HGRVEEMEARRLFQQI 120
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
L + + H VH D+K +NVL+ + AKIADFGL+ S DGE + C G+P Y
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRD-SC-GSPNYA 177
Query: 178 SPESVNENEYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PE ++ Y P DIW+ G + + G ++ D +V +L +I G + IP
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD---DEHVPTLFKKIRGG--VFYIPE 232
Query: 237 DLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
L+ L+ DP +R T + + H
Sbjct: 233 YLNRSVATLLMHMLQVDPLKRATIKDIREH 262
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 16/255 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEALDQIGI-CPQ 63
G IG G FG V+ + +S E P++ +A+K+C +C SV K +EAL P
Sbjct: 395 GRCIGEGQFGDVH--QGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 452
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IV+ G E +++E + G L ++ + L + + Y + L +
Sbjct: 453 IVKLIG-----VITENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAY 506
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ SK FVH DI +NVLV D K+ DFGL++ D ++ + + +M+PES+N
Sbjct: 507 LESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 565
Query: 184 ENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ + D+W G + E + G + ++++V RI G+ LP +P +
Sbjct: 566 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG---RIENGERLP-MPPNCPPTL 621
Query: 243 KDFLIKCFLKDPKRR 257
+ KC+ DP RR
Sbjct: 622 YSLMTKCWAYDPSRR 636
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--PQIVR 66
IG G+F V LA+ E +AVK +S +L+ + + + P IV+
Sbjct: 15 IGKGNFAKVKLARHILTGKE----VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVK 70
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
F + E+ L++EYAS G + D + +G ++E + + R ++ +++ H
Sbjct: 71 LF----EVIETEKTLYLVMEYASGGEVFDYLVA--HGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE 186
K VH D+K +N+L+ + KIADFG + + + G + +F C G+P Y +PE +
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTF-C-GSPPYAAPELFQGKK 181
Query: 187 YEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
Y+ P D+W+LG + + SG ++ N+ L R+ G IP +S ++
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFD---GQNLKELRERVLRGKY--RIPFYMSTDCENL 236
Query: 246 LIKCFLKDPKRRWTAEMLL 264
L K + +P +R T E ++
Sbjct: 237 LKKFLILNPSKRGTLEQIM 255
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 117/288 (40%), Gaps = 39/288 (13%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG GS+G V + ++ + + ++ D P E L Q+ P +V
Sbjct: 11 IGEGSYGVVFKCR-NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNLVNLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
F + R + L+ EY L + + Q + E VK T L+ + H
Sbjct: 69 E---VFRRKRRLH-LVFEYCDHTVLHELDRYQRG--VPEHLVKSITWQTLQAVNFCHKHN 122
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES-VNENEY 187
+H D+K +N+L+ + K+ DFG A+ + G + T Y SPE V + +Y
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLT--GPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 188 EAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELP--------------- 232
P D+WA+GC E+ SG P W K D + LIR +GD +P
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY-LIRKTLGDLIPRHQQVFSTNQYFSGV 239
Query: 233 NIPG------------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
IP ++S L C DP R T E LL+HP+
Sbjct: 240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 22/277 (7%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSV---TLKNEKEALDQIGICP 62
G+ +G G F V + E+ + K + V ++ E L Q+ + P
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHP 75
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+ D Y + L+LE S G L D + ++ + L E + + + +L G+
Sbjct: 76 NII-TLHDVY---ENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVN 129
Query: 123 HIHSKGFVHCDIKLQNVLVFDND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
++H+K H D+K +N+++ D + K+ DFGLA + E F GTP +++
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVA 186
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPG 236
PE VN D+W++G + SG + + KQ++ + +E +
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS--- 243
Query: 237 DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
SE KDF+ K +K+ ++R T + L HP++ D
Sbjct: 244 QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 24/270 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAK----ASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQ 57
++ GD +G G+FG V + K KV+ + + ++S ++N K
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK----- 71
Query: 58 IGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM 117
+ P I++ Y +++EY S G L D + K NGRL E + +R + +
Sbjct: 72 LFRHPHIIKL----YQVISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQI 125
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
L G+ + H VH D+K +NVL+ + AKIADFGL+ S DGE + C G+P Y
Sbjct: 126 LSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRX-SC-GSPNYA 182
Query: 178 SPESVNENEYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PE ++ Y P DIW+ G + + G ++ D +V +L +I D + P
Sbjct: 183 APEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD---DDHVPTLFKKI--CDGIFYTPQ 237
Query: 237 DLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
L+ L DP +R T + + H
Sbjct: 238 YLNPSVISLLKHMLQVDPMKRATIKDIREH 267
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+ E + G L D + ++ + L E + + + +L G+ ++HS H D+K +N+++
Sbjct: 91 LIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + KI DFGLA K E F GTP +++PE VN D+W++G
Sbjct: 149 DRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + DE + + S KDF+ + +KDPK+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS---NTSALAKDFIRRLLVKDPKK 262
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 263 RMTIQDSLQHPWIKPKD 279
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 15/254 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG G+FG V L + + + K S E++ + P +V+
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQL 139
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F Y+F+ +R+ +++EY G L V +N + E + YT ++ L IHS
Sbjct: 140 F---YAFQD-DRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN---- 183
GF+H D+K N+L+ + K+ADFG K + +G + GTP Y+SPE +
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGG 251
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
+ Y CD W++G + EM G + +S ++ P+ D+S++ K
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-DNDISKEAK 310
Query: 244 DFLIKCFLKDPKRR 257
+ LI FL D + R
Sbjct: 311 N-LICAFLTDREVR 323
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 15/254 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG G+FG V L + + + K S E++ + P +V+
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQL 134
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F Y+F+ +R+ +++EY G L V +N + E + YT ++ L IHS
Sbjct: 135 F---YAFQD-DRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFYTAEVVLALDAIHSM 187
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN---- 183
GF+H D+K N+L+ + K+ADFG K + +G + GTP Y+SPE +
Sbjct: 188 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGG 246
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
+ Y CD W++G + EM G + +S ++ P+ D+S++ K
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-DNDISKEAK 305
Query: 244 DFLIKCFLKDPKRR 257
+ LI FL D + R
Sbjct: 306 N-LICAFLTDREVR 318
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G+FGSV L + + +L+AVK P +++ +I QI++
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD-----QQRDFQREI----QILKAL 68
Query: 69 GDDY-------SFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
D+ S+ G + L++EY G L D +++ + RL S + Y+ + KG+
Sbjct: 69 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGM 127
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPE 180
++ S+ VH D+ +N+LV KIADFGLAK D + E +P++ +PE
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 187
Query: 181 SVNENEYEAPCDIWALGCAVVEM 203
S+++N + D+W+ G + E+
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G+FGSV L + + +L+AVK P +++ +I QI++
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD-----QQRDFQREI----QILKAL 69
Query: 69 GDDY-------SFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
D+ S+ G + L++EY G L D +++ + RL S + Y+ + KG+
Sbjct: 70 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGM 128
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPE 180
++ S+ VH D+ +N+LV KIADFGLAK D + E +P++ +PE
Sbjct: 129 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 188
Query: 181 SVNENEYEAPCDIWALGCAVVEM 203
S+++N + D+W+ G + E+
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 24/278 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQI- 64
G+ +G G F V + E+ + K + V+ +E ++ I Q+
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS---REEIEREVSILRQVL 73
Query: 65 ---VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
V D Y + L+LE S G L D + ++ + L E + + + +L G+
Sbjct: 74 HHNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGV 128
Query: 122 RHIHSKGFVHCDIKLQNVLVFDND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
++H+K H D+K +N+++ D + K+ DFGLA + E F GTP ++
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIP 235
+PE VN D+W++G + SG + + KQ++ + +E +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS-- 243
Query: 236 GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
SE KDF+ K +K+ ++R T + L HP++ D
Sbjct: 244 -QTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 15/254 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG G+FG V L + + + K S E++ + P +V+
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQL 139
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F Y+F+ +R+ +++EY G L V +N + E + YT ++ L IHS
Sbjct: 140 F---YAFQD-DRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN---- 183
GF+H D+K N+L+ + K+ADFG K + +G + GTP Y+SPE +
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGG 251
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
+ Y CD W++G + EM G + +S ++ P+ D+S++ K
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-DNDISKEAK 310
Query: 244 DFLIKCFLKDPKRR 257
+ LI FL D + R
Sbjct: 311 N-LICAFLTDREVR 323
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G+FGSV L + + +L+AVK P +++ +I QI++
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD-----QQRDFQREI----QILKAL 81
Query: 69 GDDY-------SFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
D+ S+ G + L++EY G L D +++ + RL S + Y+ + KG+
Sbjct: 82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGM 140
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPE 180
++ S+ VH D+ +N+LV KIADFGLAK D + E +P++ +PE
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200
Query: 181 SVNENEYEAPCDIWALGCAVVEM 203
S+++N + D+W+ G + E+
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE S G L D + ++ + L E + + + +L G+ ++H+K H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + K+ DFGLA + E F GTP +++PE VN D+W++G
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + +E + SE KDF+ K +K+ ++
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFS---QTSELAKDFIRKLLVKETRK 263
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 264 RLTIQEALRHPWITPVD 280
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
IG G+F V LA+ E + K+ + P+S+ + + +I P IV+
Sbjct: 22 TIGKGNFAKVKLARHVLTGREVAVKIIDKTQLN--PTSLQKLFREVRIMKILNHPNIVKL 79
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F + E+ L++EYAS G + D + +GR++E + + R ++ +++ H K
Sbjct: 80 F----EVIETEKTLYLVMEYASGGEVFDYLVA--HGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEY 187
VH D+K +N+L+ + KIADFG + + + G + +F C G+P Y +PE +Y
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTF-C-GSPPYAAPELFQGKKY 190
Query: 188 EAP-CDIWALGCAVVEMASG 206
+ P D+W+LG + + SG
Sbjct: 191 DGPEVDVWSLGVILYTLVSG 210
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 18/203 (8%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G+FGSV L + + +L+AVK P +++ +I QI++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD-----QQRDFQREI----QILKAL 65
Query: 69 GDDY-------SFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
D+ S+ G L++EY G L D +++ + RL S + Y+ + KG+
Sbjct: 66 HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGM 124
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPE 180
++ S+ VH D+ +N+LV KIADFGLAK D + E +P++ +PE
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 181 SVNENEYEAPCDIWALGCAVVEM 203
S+++N + D+W+ G + E+
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 124/259 (47%), Gaps = 21/259 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN--EKEALDQIGICPQIV 65
IG G+F V LA+ E +AVK +S +L+ + + ++ P IV
Sbjct: 21 TIGKGNFAKVKLARHILTGKE----VAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIV 76
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+ F + E+ L+ EYAS G + D + +GR +E + + R ++ +++ H
Sbjct: 77 KLF----EVIETEKTLYLVXEYASGGEVFDYLVA--HGRXKEKEARAKFRQIVSAVQYCH 130
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
K VH D+K +N+L+ + KIADFG + + + G + +F C G P Y +PE
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTF-GNKLDAF-C-GAPPYAAPELFQGK 187
Query: 186 EYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
+Y+ P D+W+LG + + SG ++ N+ L R+ G IP S ++
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPFD---GQNLKELRERVLRGKY--RIPFYXSTDCEN 242
Query: 245 FLIKCFLKDPKRRWTAEML 263
L K + +P +R T E +
Sbjct: 243 LLKKFLILNPSKRGTLEQI 261
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 123/278 (44%), Gaps = 24/278 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQI- 64
G+ +G G F V + E+ + K + V+ +E ++ I Q+
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS---REEIEREVSILRQVL 73
Query: 65 ---VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
V D Y + L+LE S G L D + ++ + L E + + + +L G+
Sbjct: 74 HHNVITLHDVY---ENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGV 128
Query: 122 RHIHSKGFVHCDIKLQNVLVFDND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
++H+K H D+K +N+++ D + K+ DFGLA + E F GTP ++
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFV 185
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIP 235
+PE VN D+W++G + SG + + KQ++ + +E +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS-- 243
Query: 236 GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
SE KDF+ K +K+ ++R T + L HP++ D
Sbjct: 244 -HTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE S G L D + ++ + L E + + + +L G+ ++H+K H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + K+ DFGLA + E F GTP +++PE VN D+W++G
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + +E + SE KDF+ K +K+ ++
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS---HTSELAKDFIRKLLVKETRK 263
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 264 RLTIQEALRHPWITPVD 280
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 118/266 (44%), Gaps = 24/266 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G+FG V+L + E K + P + + E E L + P I++ F
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQI--EAEIEVLKSLD-HPNIIKIF 86
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADR-VKKQNNGR-LQESDVKRYTRSMLKGLRHIHS 126
FE Y +++E G L +R V Q G+ L E V + M+ L + HS
Sbjct: 87 E---VFEDYHNMY-IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 127 KGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
+ VH D+K +N+L D + KI DFGLA+ D S GT LYM+PE V
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD---EHSTNAAGTALYMAPE-VF 198
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGD---LSE 240
+ + CDIW+ G + + +G + V + + PN + L+
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV-----QQKATYKEPNYAVECRPLTP 253
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNH 266
Q D L + KDP+RR +A +L+H
Sbjct: 254 QAVDLLKQMLTKDPERRPSAAQVLHH 279
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 18/276 (6%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
+VIG G+F V + +F ++ V P S + ++ + P IV
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLA-DRVKKQNNGRL-QESDVKRYTRSMLKGLRH 123
+ YS + ++ E+ L + VK+ + G + E+ Y R +L+ LR+
Sbjct: 90 ELL-ETYS---SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA---KIADFGLAKKSSCDGERSQSFECR-GTPLYMSP 179
H +H D+K +NVL+ + + K+ DFG+A + GE R GTP +M+P
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL---GESGLVAGGRVGTPHFMAP 202
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASG-KPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E V Y P D+W G + + SG P + K+ +F +I+ G P +
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIK-GKYKMNPRQWSHI 259
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
SE KD + + + DP R T LNHP++ D+
Sbjct: 260 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDR 295
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV +G YS GE ++ +E+ GSL +KK GR+ E + + + +++KGL
Sbjct: 64 PYIVGFYGAFYS--DGE--ISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 117
Query: 122 RHIHSKG-FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
++ K +H D+K N+LV E K+ DFG++ + + SF GT YMSPE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ--LIDSMANSF--VGTRSYMSPE 173
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGK---PAWNHKQ----------------------- 214
+ Y DIW++G ++VEMA G+ P + K+
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233
Query: 215 ---------DSN----VFSLLIRIGVGDELPNIP-GDLSEQGKDFLIKCFLKDPKRRWTA 260
DS +F LL I V + P +P G S + +DF+ KC +K+P R
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 292
Query: 261 EMLLNHPFVCADD 273
+ L+ H F+ D
Sbjct: 293 KQLMVHAFIKRSD 305
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV +G YS GE ++ +E+ GSL +KK GR+ E + + + +++KGL
Sbjct: 64 PYIVGFYGAFYS--DGE--ISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 117
Query: 122 RHIHSKG-FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
++ K +H D+K N+LV E K+ DFG++ + + SF GT YMSPE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ--LIDSMANSF--VGTRSYMSPE 173
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGK---PAWNHKQ----------------------- 214
+ Y DIW++G ++VEMA G+ P + K+
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233
Query: 215 ---------DSN----VFSLLIRIGVGDELPNIP-GDLSEQGKDFLIKCFLKDPKRRWTA 260
DS +F LL I V + P +P G S + +DF+ KC +K+P R
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 292
Query: 261 EMLLNHPFVCADD 273
+ L+ H F+ D
Sbjct: 293 KQLMVHAFIKRSD 305
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L+LE S G L D + ++ + L E + + + +L G+ ++H+K H D+K +N+++
Sbjct: 92 LILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL 149
Query: 143 DND----EAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
D + K+ DFGLA + E F GTP +++PE VN D+W++G
Sbjct: 150 DKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 199 AVVEMASGKPAW--NHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ SG + + KQ++ + +E + SE KDF+ K +K+ ++
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS---HTSELAKDFIRKLLVKETRK 263
Query: 257 RWTAEMLLNHPFVCADD 273
R T + L HP++ D
Sbjct: 264 RLTIQEALRHPWITPVD 280
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV +G YS GE ++ +E+ GSL +KK GR+ E + + + +++KGL
Sbjct: 64 PYIVGFYGAFYS--DGE--ISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 117
Query: 122 RHIHSKG-FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
++ K +H D+K N+LV E K+ DFG++ + + SF GT YMSPE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ--LIDSMANSF--VGTRSYMSPE 173
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGK---PAWNHKQ----------------------- 214
+ Y DIW++G ++VEMA G+ P + K+
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233
Query: 215 ---------DSN----VFSLLIRIGVGDELPNIP-GDLSEQGKDFLIKCFLKDPKRRWTA 260
DS +F LL I V + P +P G S + +DF+ KC +K+P R
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 292
Query: 261 EMLLNHPFVCADD 273
+ L+ H F+ D
Sbjct: 293 KQLMVHAFIKRSD 305
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 17/214 (7%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IVR + + E F+ L+ + + G L + + + E+D + +L+ +
Sbjct: 65 PNIVRL----HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESI 118
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
+ HS G VH ++K +N+L+ + K+ADFGLA + + D E F GTP Y+S
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFA--GTPGYLS 175
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPA-WNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE + ++ Y P DIWA G + + G P W+ +D + I+ G D P+ D
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYAQIKAGAYD-YPSPEWD 232
Query: 238 -LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
++ + K + +PK+R TA+ L P++C
Sbjct: 233 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 266
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV +G YS GE ++ +E+ GSL +KK GR+ E + + + +++KGL
Sbjct: 64 PYIVGFYGAFYS--DGE--ISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 117
Query: 122 RHIHSKG-FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
++ K +H D+K N+LV E K+ DFG++ + + SF GT YMSPE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ--LIDSMANSF--VGTRSYMSPE 173
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGK---PAWNHKQ----------------------- 214
+ Y DIW++G ++VEMA G+ P + K+
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 233
Query: 215 ---------DSN----VFSLLIRIGVGDELPNIP-GDLSEQGKDFLIKCFLKDPKRRWTA 260
DS +F LL I V + P +P G S + +DF+ KC +K+P R
Sbjct: 234 GRPLSSYGMDSRPPMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 292
Query: 261 EMLLNHPFVCADD 273
+ L+ H F+ D
Sbjct: 293 KQLMVHAFIKRSD 305
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IVR + + E F+ L+ + + G L + + + E+D + +L+ +
Sbjct: 64 PNIVRL----HDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESI 117
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
+ HS G VH ++K +N+L+ + K+ADFGLA + + D E F GTP Y+S
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFA--GTPGYLS 174
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPA-WNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE + ++ Y P DIWA G + + G P W+ +D + I+ G D
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYAQIKAGAYDYPSPEWDT 232
Query: 238 LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
++ + K + +PK+R TA+ L P++C
Sbjct: 233 VTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 265
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 116/253 (45%), Gaps = 52/253 (20%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV +G YS GE ++ +E+ GSL +KK GR+ E + + + +++KGL
Sbjct: 91 PYIVGFYGAFYS--DGE--ISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 144
Query: 122 RHIHSK-GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
++ K +H D+K N+LV E K+ DFG++ + SF GT YMSPE
Sbjct: 145 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDSMANSF--VGTRSYMSPE 200
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGK---PAWNHKQ----------------------- 214
+ Y DIW++G ++VEMA G+ P + K+
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260
Query: 215 ---------DSN----VFSLLIRIGVGDELPNIP-GDLSEQGKDFLIKCFLKDPKRRWTA 260
DS +F LL I V + P +P G S + +DF+ KC +K+P R
Sbjct: 261 GRPLNKFGMDSRPPMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADL 319
Query: 261 EMLLNHPFVCADD 273
+ L+ H F+ D
Sbjct: 320 KQLMVHAFIKRSD 332
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IVR + + E F+ L+ + + G L + + + E+D + +L+ +
Sbjct: 65 PNIVRL----HDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESI 118
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDE---AKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
+ HS G VH ++K +N+L+ + K+ADFGLA + + D E F GTP Y+S
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFA--GTPGYLS 175
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPA-WNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE + ++ Y P DIWA G + + G P W+ +D + I+ G D
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYAQIKAGAYDYPSPEWDT 233
Query: 238 LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
++ + K + +PK+R TA+ L P++C
Sbjct: 234 VTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 266
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 85 LEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDN 144
+E+ +G+L ++K+ +L + + KG+ +IHSK +H D+K N+ + D
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDT 172
Query: 145 DEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ KI DFGL DG+R++S +GT YMSPE ++ +Y D++ALG + E+
Sbjct: 173 KQVKIGDFGLVTSLKNDGKRTRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 21/188 (11%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
L++E + G L +R+KK+ + E++ R ++ + H+H G VH D+K +N+L
Sbjct: 83 LVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFT 140
Query: 143 D---NDEAKIADFGLAKKSSCDGE--RSQSFECRGTPLYMSPESVNENEYEAPCDIWALG 197
D N E KI DFG A+ D + ++ F T Y +PE +N+N Y+ CD+W+LG
Sbjct: 141 DENDNLEIKIIDFGFARLKPPDNQPLKTPCF----TLHYAAPELLNQNGYDESCDLWSLG 196
Query: 198 CAVVEMASGK-PAWNHKQD---SNVFSLLIRIGVGDELPNIPGD----LSEQGKDFLIKC 249
+ M SG+ P +H + ++ ++ +I GD + G+ +S++ KD +
Sbjct: 197 VILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF--SFEGEAWKNVSQEAKDLIQGL 254
Query: 250 FLKDPKRR 257
DP +R
Sbjct: 255 LTVDPNKR 262
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 13/190 (6%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
+++EYAS G L +R+ N GR E + + + + ++ G+ + H+ H D+KL+N L+
Sbjct: 92 IVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLL- 148
Query: 143 DNDEA---KIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAP-CDIWALGC 198
D A KIADFG +K S SQ GTP Y++PE + + EY+ D+W+ G
Sbjct: 149 DGSPAPRLKIADFGYSKASVL---HSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 199 AVVEMASGKPAWNHKQDSNVFSLLIR--IGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ M G + ++ F I + V +P+ +S + + + + F+ DP +
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPAK 264
Query: 257 RWTAEMLLNH 266
R + + NH
Sbjct: 265 RISIPEIRNH 274
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 17/214 (7%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IVR + + E F+ L+ + + G L + + + E+D + +L+ +
Sbjct: 88 PNIVRL----HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESI 141
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEA---KIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
+ HS G VH ++K +N+L+ + K+ADFGLA + + D E F GTP Y+S
Sbjct: 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFA--GTPGYLS 198
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPA-WNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE + ++ Y P DIWA G + + G P W+ +D + I+ G D P+ D
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYAQIKAGAYD-YPSPEWD 255
Query: 238 -LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
++ + K + +PK+R TA+ L P++C
Sbjct: 256 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 289
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 105/215 (48%), Gaps = 14/215 (6%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR- 66
VIG GSFG V LA+ K F ++ ++ A + K EK + + + + V+
Sbjct: 45 VIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKA-----ILKKKEEKHIMSERNVLLKNVKH 98
Query: 67 --CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
G +SF+ ++ Y +L+Y + G L ++++ E + Y + L ++
Sbjct: 99 PFLVGLHFSFQTADKLY-FVLDYINGGELFYHLQRERC--FLEPRARFYAAEIASALGYL 155
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
HS V+ D+K +N+L+ + DFGL K++ + +F C GTP Y++PE +++
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTF-C-GTPEYLAPEVLHK 213
Query: 185 NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
Y+ D W LG + EM G P + + + ++
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY 248
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 112/273 (41%), Gaps = 14/273 (5%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG G+FG V + K F + K + + E++ L G I
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITTL 139
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y+F+ Y L+++Y G L + K + RL E + Y M+ + +H
Sbjct: 140 ---HYAFQDDNNLY-LVMDYYVGGDLLTLLSKFED-RLPEEMARFYLAEMVIAIDSVHQL 194
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENE- 186
+VH DIK N+L+ N ++ADFG K DG QS GTP Y+SPE + E
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-TVQSSVAVGTPDYISPEILQAMEG 253
Query: 187 ----YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
Y CD W+LG + EM G+ + + + ++ + P D+SE
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENA 313
Query: 243 KDFLIKCFLKDPKR--RWTAEMLLNHPFVCADD 273
KD + + R + E HPF D
Sbjct: 314 KDLIRRLICSREHRLGQNGIEDFKKHPFFSGID 346
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV +G YS GE ++ +E+ GSL +KK GR+ E + + + +++KGL
Sbjct: 126 PYIVGFYGAFYS--DGE--ISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 179
Query: 122 RHIHSK-GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
++ K +H D+K N+LV E K+ DFG++ + + SF GT YMSPE
Sbjct: 180 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ--LIDSMANSF--VGTRSYMSPE 235
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGK---PAWNHKQ----------------------- 214
+ Y DIW++G ++VEMA G+ P + K+
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 295
Query: 215 ---------DSN----VFSLLIRIGVGDELPNIPGDL-SEQGKDFLIKCFLKDPKRRWTA 260
DS +F LL I V + P +P + S + +DF+ KC +K+P R
Sbjct: 296 GRPLSSYGMDSRPPMAIFELLDYI-VNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADL 354
Query: 261 EMLLNHPFVCADD 273
+ L+ H F+ D
Sbjct: 355 KQLMVHAFIKRSD 367
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 130/271 (47%), Gaps = 27/271 (9%)
Query: 3 WLRGDVIGHGSFGSVNLAK----ASKVSSEFPSLMAVKSCADCPPSSVTLKNEKE-ALDQ 57
++ + +G GSFG V LA KV+ +F S +K S + ++ E+E + +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK------SDMHMRVEREISYLK 64
Query: 58 IGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM 117
+ P I++ Y +++EYA G L D + ++ R+ E + +R+ + +
Sbjct: 65 LLRHPHIIKL----YDVITTPTDIVMVIEYAG-GELFDYIVEKK--RMTEDEGRRFFQQI 117
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
+ + + H VH D+K +N+L+ DN KIADFGL+ + DG ++ C G+P Y
Sbjct: 118 ICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKT-SC-GSPNYA 174
Query: 178 SPESVNENEYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PE +N Y P D+W+ G + M G+ ++ + N+F V + +P
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-----KVNSCVYVMPD 229
Query: 237 DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHP 267
LS + + + + DP +R T + + P
Sbjct: 230 FLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 88/192 (45%), Gaps = 32/192 (16%)
Query: 104 RLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGE 163
+ E ++ MLKGL++IHS G VH D+K N+ V ++ E KI DFGLA+ + D E
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA--DAE 179
Query: 164 RSQSFECRGTPLYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLL 222
+ R Y +PE + + Y DIW++GC + EM +GK + K + + +
Sbjct: 180 MTGYVVTRW---YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 223 IRI-GV-GDE----------------LPNIPGD--------LSEQGKDFLIKCFLKDPKR 256
+++ GV G E LP P S Q D L K D +
Sbjct: 237 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 296
Query: 257 RWTAEMLLNHPF 268
R TA L HPF
Sbjct: 297 RLTAAQALTHPF 308
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 32/189 (16%)
Query: 107 ESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
E ++ MLKGL++IHS G VH D+K N+ V ++ E KI DFGLA+ + D E +
Sbjct: 143 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA--DAEMTG 200
Query: 167 SFECRGTPLYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI 225
R Y +PE + + Y DIW++GC + EM +GK + K + + ++++
Sbjct: 201 YVVTR---WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 257
Query: 226 -GV-GDE----------------LPNIPGD--------LSEQGKDFLIKCFLKDPKRRWT 259
GV G E LP P S Q D L K D +R T
Sbjct: 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 317
Query: 260 AEMLLNHPF 268
A L HPF
Sbjct: 318 AAQALTHPF 326
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 7/190 (3%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++ E+ S G L ++V ++N ++ E + Y R + KGL H+H +VH D+K +N++
Sbjct: 231 MIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 289
Query: 143 D--NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAV 200
++E K+ DFGL + D ++S GT + +PE D+W++G
Sbjct: 290 TKRSNELKLIDFGLT--AHLDPKQSVKVTT-GTAEFAAPEVAEGKPVGYYTDMWSVGVLS 346
Query: 201 VEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTA 260
+ SG + + D + + G +SE GKDF+ K L DP R T
Sbjct: 347 YILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG-ISEDGKDFIRKLLLADPNTRMTI 405
Query: 261 EMLLNHPFVC 270
L HP++
Sbjct: 406 HQALEHPWLT 415
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 7/190 (3%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++ E+ S G L ++V ++N ++ E + Y R + KGL H+H +VH D+K +N++
Sbjct: 125 MIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 183
Query: 143 D--NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAV 200
++E K+ DFGL + D ++S GT + +PE D+W++G
Sbjct: 184 TKRSNELKLIDFGLT--AHLDPKQSVKVTT-GTAEFAAPEVAEGKPVGYYTDMWSVGVLS 240
Query: 201 VEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTA 260
+ SG + + D + + G +SE GKDF+ K L DP R T
Sbjct: 241 YILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG-ISEDGKDFIRKLLLADPNTRMTI 299
Query: 261 EMLLNHPFVC 270
L HP++
Sbjct: 300 HQALEHPWLT 309
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 100 QNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSS 159
++N QE YT ++ GL H+H + ++ D+K +NVL+ D+ +I+D GLA +
Sbjct: 281 EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 160 CDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
+++ + GTP +M+PE + EY+ D +ALG + EM + + + + + V
Sbjct: 341 AGQTKTKGYA--GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVE 397
Query: 220 SLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ ++ V ++ P S KDF KDP++R
Sbjct: 398 NKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 100 QNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSS 159
++N QE YT ++ GL H+H + ++ D+K +NVL+ D+ +I+D GLA +
Sbjct: 281 EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 160 CDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
+++ + GTP +M+PE + EY+ D +ALG + EM + + + + + V
Sbjct: 341 AGQTKTKGYA--GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVE 397
Query: 220 SLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ ++ V ++ P S KDF KDP++R
Sbjct: 398 NKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 30/268 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQIVRC 67
IG G+FG L + K S+E L+AVK + +K +E ++ + P IVR
Sbjct: 27 IGSGNFGVARLMR-DKQSNE---LVAVKYIERGEKIAANVK--REIINHRSLRHPNIVR- 79
Query: 68 FGDDYSFEK---GERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
F++ +++EYAS G L +R+ N GR E + + + + ++ G+ +
Sbjct: 80 ------FKEVILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYC 131
Query: 125 HSKGFVHCDIKLQNVLVFDNDEA---KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
H+ H D+KL+N L+ D A KI DFG +K S SQ GTP Y++PE
Sbjct: 132 HAMQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVL---HSQPKSTVGTPAYIAPEV 187
Query: 182 VNENEYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIR--IGVGDELPNIPGDL 238
+ + EY+ D+W+ G + M G + ++ F I + V +P+ +
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHI 246
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
S + + + + F+ DP +R + + NH
Sbjct: 247 SPECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 130/303 (42%), Gaps = 53/303 (17%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVK------SCADCPPSSV---TLKNEKEALDQIG 59
IG G++G+V A+ S F +L +V+ P S+V L EA +
Sbjct: 17 IGVGAYGTVYKARDPH-SGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEH-- 73
Query: 60 ICPQIVRCFGDDYSFEKGER--FYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM 117
P +VR D + + +R L+ E+ + L + K L +K R
Sbjct: 74 --PNVVRLM-DVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
L+GL +H+ VH D+K +N+LV K+ADFGLA R S++ TP+
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA--------RIYSYQMALTPVVV 181
Query: 176 ---YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAW--NHKQDS--NVFSLL------ 222
Y +PE + ++ Y P D+W++GC EM KP + N + D +F L+
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241
Query: 223 -----IRIGVGDELPNIP-------GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
+ + G P P ++ E G L++ +P +R +A L H ++
Sbjct: 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301
Query: 271 ADD 273
D+
Sbjct: 302 KDE 304
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 100 QNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSS 159
++N QE YT ++ GL H+H + ++ D+K +NVL+ D+ +I+D GLA +
Sbjct: 281 EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 160 CDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
+++ + GTP +M+PE + EY+ D +ALG + EM + + + + + V
Sbjct: 341 AGQTKTKGYA--GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVE 397
Query: 220 SLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ ++ V ++ P S KDF KDP++R
Sbjct: 398 NKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 100 QNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSS 159
++N QE YT ++ GL H+H + ++ D+K +NVL+ D+ +I+D GLA +
Sbjct: 281 EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 160 CDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
+++ + GTP +M+PE + EY+ D +ALG + EM + + + + + V
Sbjct: 341 AGQTKTKGYA--GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-KVE 397
Query: 220 SLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ ++ V ++ P S KDF KDP++R
Sbjct: 398 NKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 40/295 (13%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSC---ADCPPSSV---TLKNEKEALDQIGICP 62
IG G++G+V A+ S F +L +V+ P S+V L EA + P
Sbjct: 12 IGVGAYGTVYKARDPH-SGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH----P 66
Query: 63 QIVRCFGDDYSFEKGER--FYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
+VR D + + +R L+ E+ + L + K L +K R L+G
Sbjct: 67 NVVRLM-DVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L +H+ VH D+K +N+LV K+ADFGLA+ S + F T Y +PE
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALFPVVVTLWYRAPE 181
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAW--NHKQDS--NVFSLL-----------IRI 225
+ ++ Y P D+W++GC EM KP + N + D +F L+ + +
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 226 GVGDELPNIP-------GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
G P P ++ E G L++ +P +R +A L H ++ D+
Sbjct: 242 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 296
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 125/296 (42%), Gaps = 36/296 (12%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
M L +++G G++ V A + + E+ + K S + E E L Q
Sbjct: 13 MYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGH---SRSRVFREVETLYQCQG 69
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
I+ FE RFY L+ E GS+ ++KQ + E + R R +
Sbjct: 70 NKNILELIE---FFEDDTRFY-LVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAA 123
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDE---AKIADF----GLAKKSSCDGERSQSFECR-G 172
L +H+KG H D+K +N+L ++ KI DF G+ +SC + G
Sbjct: 124 LDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 173 TPLYMSPESV-----NENEYEAPCDIWALGCAVVEMASGKP----------AWNHKQDSN 217
+ YM+PE V Y+ CD+W+LG + M SG P W+ +
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCR 243
Query: 218 VFS--LLIRIGVGD-ELPNIP-GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
V L I G E P+ +S + KD + K ++D K+R +A +L HP+V
Sbjct: 244 VCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 32/277 (11%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-PQI 64
G +G G FG+V LA+ K S F + V + V + +E Q + P I
Sbjct: 28 GRPLGKGKFGNVYLAREKK--SHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNI 85
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R + +Y +++ R Y L+LEYA RG L ++K E + L +
Sbjct: 86 LRLY--NYFYDR-RRIY-LILEYAPRGELYKELQKSCT--FDEQRTATIMEELADALMYC 139
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFG-------LAKKSSCDGERSQSFECRGTPLYM 177
H K +H DIK +N+L+ E KIADFG L +K+ C GT Y+
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC-----------GTLDYL 188
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGD 237
PE + + D+W +G E+ G P + + + ++++ + P
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDL-----KFPAS 243
Query: 238 LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
+ +D + K +P R + HP+V A+ +
Sbjct: 244 VPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRANSR 280
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 27/275 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN----EKEALDQIGIC--- 61
+G G++G V L K SE + KS D S KN +E ++I +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 62 --PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
P I++ F FE + FY L+ E+ G L +++ N + E D + +L
Sbjct: 104 DHPNIIKLFD---VFEDKKYFY-LVTEFYEGGELFEQI--INRHKFDECDAANIMKQILS 157
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDND---EAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
G+ ++H VH DIK +N+L+ + + KI DFGL+ S D + GT Y
Sbjct: 158 GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL---GTAYY 214
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIP- 235
++PE V + +Y CD+W+ G + + G P + + D ++ ++ G +
Sbjct: 215 IAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK---KVEKGKYYFDFND 270
Query: 236 -GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
++S++ K+ + D +R TAE LN ++
Sbjct: 271 WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 17/265 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G+++G G V+LA+ ++ + + A P S L+ +EA + + P I
Sbjct: 17 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP--SFYLRFRREAQNAAALNHPAI 74
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V + + +++EY +L D V + G + + L
Sbjct: 75 VAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFS 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGER-SQSFECRGTPLYMSPESVN 183
H G +H D+K N+++ + K+ DFG+A+ + G +Q+ GT Y+SPE
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG----DLS 239
+ +A D+++LGC + E+ +G+P + +V +R E P P LS
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-----EDPIPPSARHEGLS 247
Query: 240 EQGKDFLIKCFLKDPKRRW--TAEM 262
++K K+P+ R+ AEM
Sbjct: 248 ADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 111/270 (41%), Gaps = 35/270 (12%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVK---SCADCPPSSVTLKNEKEALDQIGICPQIV 65
+GHGS+G V + S E L AVK S P E + +++G P V
Sbjct: 65 LGHGSYGEVFKVR----SKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCV 120
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
R + ++E+G Y L+ G + + L E+ V Y R L L H+H
Sbjct: 121 RL---EQAWEEGGILY---LQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
S+G VH D+K N+ + K+ DFGL + G G P YM+PE + +
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ---EGDPRYMAPELL-QG 230
Query: 186 EYEAPCDIWALGCAVVEMA------SGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
Y D+++LG ++E+A G W + G P LS
Sbjct: 231 SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ------------GYLPPEFTAGLS 278
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+ + L+ DPK R TAE LL P +
Sbjct: 279 SELRSVLVMMLEPDPKLRATAEALLALPVL 308
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGR--LQESDVKRYTRSMLK 119
P IVR + D ++ +++EY G LA + K R L E V R +
Sbjct: 65 PNIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 120 GLRHIHSKG-----FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTP 174
L+ H + +H D+K NV + K+ DFGLA+ + D +++F GTP
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV--GTP 180
Query: 175 LYMSPESVNENEYEAPCDIWALGCAVVEMASGKP---AWNHKQDSNVFSLLIRIGVGDEL 231
YMSPE +N Y DIW+LGC + E+ + P A++ K+ + IR G +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK----IREG---KF 233
Query: 232 PNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
IP S++ + + + R + E +L +P +
Sbjct: 234 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 15/211 (7%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
M++ ++IG G FG V AK ++ + + VK + V LD + I
Sbjct: 11 MDFKEIELIGSGGFGQVFKAK-HRIDGKTYVIKRVKYNNEKAEREV---KALAKLDHVNI 66
Query: 61 CPQIVRCFGDDYSFEKGERFYN--------LLLEYASRGSLADRVKKQNNGRLQESDVKR 112
G DY E + + + +E+ +G+L ++K+ +L +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ KG+ +IHSK ++ D+K N+ + D + KI DFGL DG+R +S +G
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS---KG 183
Query: 173 TPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
T YMSPE ++ +Y D++ALG + E+
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 13/190 (6%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
+++EYAS G L +R+ N GR E + + + + ++ G+ + H+ H D+KL+N L+
Sbjct: 91 IVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL- 147
Query: 143 DNDEA---KIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAP-CDIWALGC 198
D A KI DFG +K S SQ GTP Y++PE + + EY+ D+W+ G
Sbjct: 148 DGSPAPRLKICDFGYSKSSVL---HSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 204
Query: 199 AVVEMASGKPAWNHKQDSNVFSLLIR--IGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ M G + ++ F I + V +P+ +S + + + + F+ DP +
Sbjct: 205 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPAK 263
Query: 257 RWTAEMLLNH 266
R + + NH
Sbjct: 264 RISIPEIRNH 273
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI------CP 62
+G G++G V K V S +MAVK ++V + +K L + I CP
Sbjct: 15 LGRGAYGVVE--KMRHVPSG--QIMAVKRIR----ATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
V +G F +G+ + + L S +V + + E + + S++K L
Sbjct: 67 FTVTFYG--ALFREGDVWICMELMDTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKALE 123
Query: 123 HIHSK-GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
H+HSK +H D+K NVL+ + K+ DFG++ D + C+ YM+PE
Sbjct: 124 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP---YMAPER 180
Query: 182 VN----ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGD 237
+N + Y DIW+LG ++E+A + + + F L ++ V + P +P D
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQV-VEEPSPQLPAD 237
Query: 238 -LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
S + DF +C K+ K R T L+ HPF
Sbjct: 238 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGR--LQESDVKRYTRSMLK 119
P IVR + D ++ +++EY G LA + K R L E V R +
Sbjct: 65 PNIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 120 GLRHIHSKG-----FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTP 174
L+ H + +H D+K NV + K+ DFGLA+ + D +++F GTP
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV--GTP 180
Query: 175 LYMSPESVNENEYEAPCDIWALGCAVVEMASGKP---AWNHKQDSNVFSLLIRIGVGDEL 231
YMSPE +N Y DIW+LGC + E+ + P A++ K+ + IR G +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK----IREG---KF 233
Query: 232 PNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
IP S++ + + + R + E +L +P +
Sbjct: 234 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 56/253 (22%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV +G YS GE ++ +E+ GSL D+V K+ R+ E + + + ++L+GL
Sbjct: 74 PYIVGFYGAFYS--DGE--ISICMEHMDGGSL-DQVLKEAK-RIPEEILGKVSIAVLRGL 127
Query: 122 RHIHSKG-FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
++ K +H D+K N+LV E K+ DFG++ + + SF GT YM+PE
Sbjct: 128 AYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQ--LIDSMANSF--VGTRSYMAPE 183
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGK--------------------------------- 207
+ Y DIW++G ++VE+A G+
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPR 243
Query: 208 ------PAWNHKQDSN----VFSLLIRIGVGDELPNIP-GDLSEQGKDFLIKCFLKDPKR 256
P H DS +F LL I V + P +P G + ++F+ KC +K+P
Sbjct: 244 PRPPGRPVSGHGMDSRPAMAIFELLDYI-VNEPPPKLPNGVFTPDFQEFVNKCLIKNPAE 302
Query: 257 RWTAEMLLNHPFV 269
R +ML NH F+
Sbjct: 303 RADLKMLTNHTFI 315
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 17/265 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G+++G G V+LA+ ++ + + A P S L+ +EA + + P I
Sbjct: 34 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP--SFYLRFRREAQNAAALNHPAI 91
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V + + +++EY +L D V + G + + L
Sbjct: 92 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFS 149
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGER-SQSFECRGTPLYMSPESVN 183
H G +H D+K N+++ + K+ DFG+A+ + G +Q+ GT Y+SPE
Sbjct: 150 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG----DLS 239
+ +A D+++LGC + E+ +G+P + +V +R E P P LS
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-----EDPIPPSARHEGLS 264
Query: 240 EQGKDFLIKCFLKDPKRRW--TAEM 262
++K K+P+ R+ AEM
Sbjct: 265 ADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 17/265 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G+++G G V+LA+ ++ + + A P S L+ +EA + + P I
Sbjct: 17 GEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP--SFYLRFRREAQNAAALNHPAI 74
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V + + +++EY +L D V + G + + L
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFS 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGER-SQSFECRGTPLYMSPESVN 183
H G +H D+K N+++ + K+ DFG+A+ + G +Q+ GT Y+SPE
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG----DLS 239
+ +A D+++LGC + E+ +G+P + +V +R E P P LS
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-----EDPIPPSARHEGLS 247
Query: 240 EQGKDFLIKCFLKDPKRRW--TAEM 262
++K K+P+ R+ AEM
Sbjct: 248 ADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 50/300 (16%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSC---ADCPPSSV---TLKNEKEALDQIGICP 62
IG G++G+V A+ S F +L +V+ P S+V L EA + P
Sbjct: 12 IGVGAYGTVYKARDPH-SGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH----P 66
Query: 63 QIVRCFGDDYSFEKGER--FYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
+VR D + + +R L+ E+ + L + K L +K R L+G
Sbjct: 67 NVVRLM-DVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL----- 175
L +H+ VH D+K +N+LV K+ADFGLA R S++ P+
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA--------RIYSYQMALAPVVVTLW 176
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAW--NHKQDS--NVFSLL--------- 222
Y +PE + ++ Y P D+W++GC EM KP + N + D +F L+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 223 --IRIGVGDELPNIP-------GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+ + G P P ++ E G L++ +P +R +A L H ++ D+
Sbjct: 237 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 296
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 21/218 (9%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGR--LQESDVKRYTRSMLK 119
P IVR + D ++ +++EY G LA + K R L E V R +
Sbjct: 65 PNIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 120 GLRHIHSKG-----FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTP 174
L+ H + +H D+K NV + K+ DFGLA+ + D + ++ F GTP
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV--GTP 180
Query: 175 LYMSPESVNENEYEAPCDIWALGCAVVEMASGKP---AWNHKQDSNVFSLLIRIGVGDEL 231
YMSPE +N Y DIW+LGC + E+ + P A++ K+ + IR G +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK----IREG---KF 233
Query: 232 PNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
IP S++ + + + R + E +L +P +
Sbjct: 234 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 29/263 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V + + PS V C V ++ EA+D +R
Sbjct: 16 LGDGSFGVVR-----RGEWDAPSGKTVSVAVKCLKPDVL--SQPEAMDDF------IREV 62
Query: 69 GDDYSFEKGE--RFYNLLL--------EYASRGSLADRVKKQNNGRLQESDVKRYTRSML 118
+S + R Y ++L E A GSL DR++K + G + RY +
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVA 121
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YM 177
+G+ ++ SK F+H D+ +N+L+ D KI DFGL + + + E R P +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PES+ + D W G + EM + G+ W S + + + G+ LP P
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK--EGERLPR-PE 238
Query: 237 DLSEQGKDFLIKCFLKDPKRRWT 259
D + + +++C+ P+ R T
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 50/300 (16%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSC---ADCPPSSV---TLKNEKEALDQIGICP 62
IG G++G+V A+ S F +L +V+ P S+V L EA + P
Sbjct: 12 IGVGAYGTVYKARDPH-SGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH----P 66
Query: 63 QIVRCFGDDYSFEKGER--FYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
+VR D + + +R L+ E+ + L + K L +K R L+G
Sbjct: 67 NVVRLM-DVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL----- 175
L +H+ VH D+K +N+LV K+ADFGLA R S++ P+
Sbjct: 125 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA--------RIYSYQMALDPVVVTLW 176
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAW--NHKQDS--NVFSLL--------- 222
Y +PE + ++ Y P D+W++GC EM KP + N + D +F L+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 223 --IRIGVGDELPNIP-------GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+ + G P P ++ E G L++ +P +R +A L H ++ D+
Sbjct: 237 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 296
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 29/263 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V + + PS V C V ++ EA+D +R
Sbjct: 26 LGDGSFGVVR-----RGEWDAPSGKTVSVAVKCLKPDVL--SQPEAMDDF------IREV 72
Query: 69 GDDYSFEKGE--RFYNLLL--------EYASRGSLADRVKKQNNGRLQESDVKRYTRSML 118
+S + R Y ++L E A GSL DR++K + G + RY +
Sbjct: 73 NAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVA 131
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YM 177
+G+ ++ SK F+H D+ +N+L+ D KI DFGL + + + E R P +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PES+ + D W G + EM + G+ W S + + + G+ LP P
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK--EGERLPR-PE 248
Query: 237 DLSEQGKDFLIKCFLKDPKRRWT 259
D + + +++C+ P+ R T
Sbjct: 249 DCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 29/263 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V + + PS V C V ++ EA+D +R
Sbjct: 16 LGDGSFGVVR-----RGEWDAPSGKTVSVAVKCLKPDVL--SQPEAMDDF------IREV 62
Query: 69 GDDYSFEKGE--RFYNLLL--------EYASRGSLADRVKKQNNGRLQESDVKRYTRSML 118
+S + R Y ++L E A GSL DR++K + G + RY +
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVA 121
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YM 177
+G+ ++ SK F+H D+ +N+L+ D KI DFGL + + + E R P +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PES+ + D W G + EM + G+ W S + + + G+ LP P
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK--EGERLPR-PE 238
Query: 237 DLSEQGKDFLIKCFLKDPKRRWT 259
D + + +++C+ P+ R T
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI------CP 62
+G G++G V K V S +MAVK ++V + +K L + I CP
Sbjct: 59 LGRGAYGVVE--KMRHVPSG--QIMAVKRIR----ATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
V +G F +G+ + + L S +V + + E + + S++K L
Sbjct: 111 FTVTFYG--ALFREGDVWICMELMDTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKALE 167
Query: 123 HIHSK-GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
H+HSK +H D+K NVL+ + K+ DFG++ ++ C+ YM+PE
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP---YMAPER 224
Query: 182 VN----ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGD 237
+N + Y DIW+LG ++E+A + + + F L ++ V + P +P D
Sbjct: 225 INPELNQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQV-VEEPSPQLPAD 281
Query: 238 -LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
S + DF +C K+ K R T L+ HPF
Sbjct: 282 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 29/263 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V + + PS V C V ++ EA+D +R
Sbjct: 16 LGDGSFGVVR-----RGEWDAPSGKTVSVAVKCLKPDVL--SQPEAMDDF------IREV 62
Query: 69 GDDYSFEKGE--RFYNLLL--------EYASRGSLADRVKKQNNGRLQESDVKRYTRSML 118
+S + R Y ++L E A GSL DR++K + G + RY +
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVA 121
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YM 177
+G+ ++ SK F+H D+ +N+L+ D KI DFGL + + + E R P +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PES+ + D W G + EM + G+ W S + + + G+ LP P
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK--EGERLPR-PE 238
Query: 237 DLSEQGKDFLIKCFLKDPKRRWT 259
D + + +++C+ P+ R T
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 29/263 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V + + PS V C V ++ EA+D +R
Sbjct: 20 LGDGSFGVVR-----RGEWDAPSGKTVSVAVKCLKPDVL--SQPEAMDDF------IREV 66
Query: 69 GDDYSFEKGE--RFYNLLL--------EYASRGSLADRVKKQNNGRLQESDVKRYTRSML 118
+S + R Y ++L E A GSL DR++K + G + RY +
Sbjct: 67 NAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVA 125
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YM 177
+G+ ++ SK F+H D+ +N+L+ D KI DFGL + + + E R P +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PES+ + D W G + EM + G+ W S + + + G+ LP P
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK--EGERLPR-PE 242
Query: 237 DLSEQGKDFLIKCFLKDPKRRWT 259
D + + +++C+ P+ R T
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 29/263 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V + + PS V C V ++ EA+D +R
Sbjct: 26 LGDGSFGVVR-----RGEWDAPSGKTVSVAVKCLKPDVL--SQPEAMDDF------IREV 72
Query: 69 GDDYSFEKGE--RFYNLLL--------EYASRGSLADRVKKQNNGRLQESDVKRYTRSML 118
+S + R Y ++L E A GSL DR++K + G + RY +
Sbjct: 73 NAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVA 131
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YM 177
+G+ ++ SK F+H D+ +N+L+ D KI DFGL + + + E R P +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PES+ + D W G + EM + G+ W S + + + G+ LP P
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK--EGERLPR-PE 248
Query: 237 DLSEQGKDFLIKCFLKDPKRRWT 259
D + + +++C+ P+ R T
Sbjct: 249 DCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 31/274 (11%)
Query: 14 FGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTL---KNEKEALDQIGI-CPQIVRCFG 69
GS +K +V +E + A+K + TL +NE L+++ +I+R
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 93
Query: 70 DDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGF 129
Y +E +++ +++E L +KK+ + + + K Y ++ML+ + IH G
Sbjct: 94 --YDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 130 VHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE----- 184
VH D+K N L+ D K+ DFG+A + D GT YM PE++ +
Sbjct: 149 VHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 185 ------NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGD---ELPNIP 235
++ D+W+LGC + M GK + +Q N S L I + E P+IP
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAIIDPNHEIEFPDIP 265
Query: 236 GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+ +D L C +DPK+R + LL HP+V
Sbjct: 266 ---EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 14 FGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTL---KNEKEALDQIGI-CPQIVRCFG 69
GS +K +V +E + A+K + TL +NE L+++ +I+R
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 93
Query: 70 DDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGF 129
Y +E +++ +++E L +KK+ + + + K Y ++ML+ + IH G
Sbjct: 94 --YDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 130 VHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE----- 184
VH D+K N L+ D K+ DFG+A + D GT YM PE++ +
Sbjct: 149 VHSDLKPANFLIVDG-MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 185 ------NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI---GVGDELPNIP 235
++ D+W+LGC + M GK + +Q N S L I E P+IP
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAIIDPNHEIEFPDIP 265
Query: 236 GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+ +D L C +DPK+R + LL HP+V
Sbjct: 266 ---EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 29/263 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V + + PS V C V ++ EA+D +R
Sbjct: 20 LGDGSFGVVR-----RGEWDAPSGKTVSVAVKCLKPDVL--SQPEAMDDF------IREV 66
Query: 69 GDDYSFEKGE--RFYNLLL--------EYASRGSLADRVKKQNNGRLQESDVKRYTRSML 118
+S + R Y ++L E A GSL DR++K + G + RY +
Sbjct: 67 NAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVA 125
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YM 177
+G+ ++ SK F+H D+ +N+L+ D KI DFGL + + + E R P +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
+PES+ + D W G + EM + G+ W S + + + G+ LP P
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK--EGERLPR-PE 242
Query: 237 DLSEQGKDFLIKCFLKDPKRRWT 259
D + + +++C+ P+ R T
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 31/274 (11%)
Query: 14 FGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTL---KNEKEALDQIGI-CPQIVRCFG 69
GS +K +V +E + A+K + TL +NE L+++ +I+R
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL-- 121
Query: 70 DDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGF 129
Y +E +++ +++E L +KK+ + + + K Y ++ML+ + IH G
Sbjct: 122 --YDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 130 VHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE----- 184
VH D+K N L+ D K+ DFG+A + D GT YM PE++ +
Sbjct: 177 VHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 185 ------NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGD---ELPNIP 235
++ D+W+LGC + M GK + +Q N S L I + E P+IP
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAIIDPNHEIEFPDIP 293
Query: 236 GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+ +D L C +DPK+R + LL HP+V
Sbjct: 294 ---EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 30/268 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQIVRC 67
IG G+FG L + K++ E ++ ++ A ++ ++E ++ + P IVR
Sbjct: 28 IGSGNFGVARLMR-DKLTKELVAVKYIERGA-----AIDENVQREIINHRSLRHPNIVR- 80
Query: 68 FGDDYSFEK---GERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
F++ +++EYAS G L +R+ N GR E + + + + +L G+ +
Sbjct: 81 ------FKEVILTPTHLAIIMEYASGGELYERIC--NAGRFSEDEARFFFQQLLSGVSYC 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDEA---KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
HS H D+KL+N L+ D A KI DFG +K S SQ GTP Y++PE
Sbjct: 133 HSMQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVL---HSQPKSTVGTPAYIAPEV 188
Query: 182 VNENEYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGD--L 238
+ EY+ D+W+ G + M G + ++ + I+ + + +IP D +
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-SIPDDIRI 247
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
S + + + F+ DP R + + H
Sbjct: 248 SPECCHLISRIFVADPATRISIPEIKTH 275
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 111 KRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFEC 170
K Y ++ML+ + IH G VH D+K N L+ D K+ DFG+A + D
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 171 RGTPLYMSPESVNE-----------NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
GT YM PE++ + ++ D+W+LGC + M GK + +Q N
Sbjct: 173 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQI 230
Query: 220 SLLIRIGVGD---ELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S L I + E P+IP + +D L C +DPK+R + LL HP+V
Sbjct: 231 SKLHAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 280
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G+FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 100 HKNIINLLG--ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMT 155
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 111 KRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFEC 170
K Y ++ML+ + IH G VH D+K N L+ D K+ DFG+A + D
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 171 RGTPLYMSPESVNE-----------NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
GT YM PE++ + ++ D+W+LGC + M GK + +Q N
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQI 274
Query: 220 SLLIRI---GVGDELPNIP-GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S L I E P+IP DL +D L C +DPK+R + LL HP+V
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 111 KRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFEC 170
K Y ++ML+ + IH G VH D+K N L+ D K+ DFG+A + D
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 171 RGTPLYMSPESVNE-----------NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
GT YM PE++ + ++ D+W+LGC + M GK + +Q N
Sbjct: 169 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQI 226
Query: 220 SLLIRIGVGD---ELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S L I + E P+IP + +D L C +DPK+R + LL HP+V
Sbjct: 227 SKLHAIIDPNHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 276
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 13/190 (6%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
+++EYAS G L +R+ N GR E + + + + ++ G+ + H+ H D+KL+N L+
Sbjct: 92 IVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL- 148
Query: 143 DNDEA---KIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAP-CDIWALGC 198
D A KI FG +K S SQ + GTP Y++PE + + EY+ D+W+ G
Sbjct: 149 DGSPAPRLKICAFGYSKSSVL---HSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 199 AVVEMASGKPAWNHKQDSNVFSLLIR--IGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ M G + ++ F I + V +P+ +S + + + + F+ DP +
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPAK 264
Query: 257 RWTAEMLLNH 266
R + + NH
Sbjct: 265 RISIPEIRNH 274
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 17/254 (6%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQI--GICPQIV 65
+IG G FG V + + + K NE+ L + G CP IV
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
C Y+F ++ + +L+ + G L + + +G E+D++ Y ++ GL H+H
Sbjct: 255 -CMS--YAFHTPDKL-SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMH 308
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
++ V+ D+K N+L+ ++ +I+D GLA CD + + GT YM+PE + +
Sbjct: 309 NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKG 364
Query: 186 -EYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y++ D ++LGC + ++ G P HK + + + ELP+ S + +
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD---SFSPELR 421
Query: 244 DFLIKCFLKDPKRR 257
L +D RR
Sbjct: 422 SLLEGLLQRDVNRR 435
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 111 KRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFEC 170
K Y ++ML+ + IH G VH D+K N L+ D K+ DFG+A + D
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 171 RGTPLYMSPESVNE-----------NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
GT YM PE++ + ++ D+W+LGC + M GK + +Q N
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQI 227
Query: 220 SLLIRI---GVGDELPNIP-GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S L I E P+IP DL +D L C +DPK+R + LL HP+V
Sbjct: 228 SKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 277
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 17/265 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G+++G G V+LA+ + + + A P S L+ +EA + + P I
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP--SFYLRFRREAQNAAALNHPAI 74
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V + + +++EY +L D V + G + + L
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFS 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGER-SQSFECRGTPLYMSPESVN 183
H G +H D+K N+L+ + K+ DFG+A+ + G Q+ GT Y+SPE
Sbjct: 133 HQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG----DLS 239
+ +A D+++LGC + E+ +G+P + +V +R E P P LS
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-----EDPIPPSARHEGLS 247
Query: 240 EQGKDFLIKCFLKDPKRRW--TAEM 262
++K K+P+ R+ AEM
Sbjct: 248 ADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 14 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 71
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ S L D + + +K Y +L+GL HS
Sbjct: 72 DVIHT----ENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 32/202 (15%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K + +L E ++ MLKGLR+IH+ G +H D+K N+ V ++ E KI DFG
Sbjct: 114 TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG 173
Query: 154 LAKKSSCDGERSQSFECRGTPLYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAWNH 212
LA+++ D E R Y +PE + N Y DIW++GC + EM +GK +
Sbjct: 174 LARQA--DSEMXGXVVTR---WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228
Query: 213 KQDSNVFSLLIRIG-----------VGDELPNIPGDLSE-QGKDF--------------L 246
+ ++++ DE N L E + KDF L
Sbjct: 229 SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLL 288
Query: 247 IKCFLKDPKRRWTAEMLLNHPF 268
K + D ++R TA L HP+
Sbjct: 289 EKMLVLDAEQRVTAGEALAHPY 310
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 13 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 70
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ S L D + + +K Y +L+GL HS
Sbjct: 71 DVIHT----ENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 183
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 17/254 (6%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQI--GICPQIV 65
+IG G FG V + + + K NE+ L + G CP IV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
C Y+F ++ + +L+ + G L + + +G E+D++ Y ++ GL H+H
Sbjct: 256 -CMS--YAFHTPDKL-SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMH 309
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
++ V+ D+K N+L+ ++ +I+D GLA CD + + GT YM+PE + +
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 186 -EYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y++ D ++LGC + ++ G P HK + + + ELP+ S + +
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD---SFSPELR 422
Query: 244 DFLIKCFLKDPKRR 257
L +D RR
Sbjct: 423 SLLEGLLQRDVNRR 436
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 18/272 (6%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
VIG G+FG V L + K S + ++ + S E+ + P +V+
Sbjct: 82 VIGRGAFGEVQLVR-HKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
F +F+ + Y +++EY G L V +N + E K YT ++ L IHS
Sbjct: 141 FC---AFQDDKYLY-MVMEYMPGGDL---VNLMSNYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESV----N 183
G +H D+K N+L+ + K+ADFG K G GTP Y+SPE +
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG-MVHCDTAVGTPDYISPEVLKSQGG 252
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
+ Y CD W++G + EM G + +S ++ P ++S+ K
Sbjct: 253 DGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPE-DAEISKHAK 311
Query: 244 DFLIKCFLKDPKRRW---TAEMLLNHPFVCAD 272
+ LI FL D + R E + HPF D
Sbjct: 312 N-LICAFLTDREVRLGRNGVEEIKQHPFFKND 342
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 17/265 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G+++G G V+LA+ + + + A P S L+ +EA + + P I
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP--SFYLRFRREAQNAAALNHPAI 74
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V + + +++EY +L D V + G + + L
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFS 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGER-SQSFECRGTPLYMSPESVN 183
H G +H D+K N+++ + K+ DFG+A+ + G +Q+ GT Y+SPE
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG----DLS 239
+ +A D+++LGC + E+ +G+P + +V +R E P P LS
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR-----EDPIPPSARHEGLS 247
Query: 240 EQGKDFLIKCFLKDPKRRW--TAEM 262
++K K+P+ R+ AEM
Sbjct: 248 ADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 17/254 (6%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQI--GICPQIV 65
+IG G FG V + + + K NE+ L + G CP IV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
C Y+F ++ + +L+ + G L + + +G E+D++ Y ++ GL H+H
Sbjct: 256 -CMS--YAFHTPDKL-SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMH 309
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
++ V+ D+K N+L+ ++ +I+D GLA CD + + GT YM+PE + +
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 186 -EYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y++ D ++LGC + ++ G P HK + + + ELP+ S + +
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD---SFSPELR 422
Query: 244 DFLIKCFLKDPKRR 257
L +D RR
Sbjct: 423 SLLEGLLQRDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 17/254 (6%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQI--GICPQIV 65
+IG G FG V + + + K NE+ L + G CP IV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
C Y+F ++ + +L+ + G L + + +G E+D++ Y ++ GL H+H
Sbjct: 256 -CMS--YAFHTPDKL-SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMH 309
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
++ V+ D+K N+L+ ++ +I+D GLA CD + + GT YM+PE + +
Sbjct: 310 NRFVVYRDLKPANILLDEHGHVRISDLGLA----CDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 186 -EYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
Y++ D ++LGC + ++ G P HK + + + ELP+ S + +
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD---SFSPELR 422
Query: 244 DFLIKCFLKDPKRR 257
L +D RR
Sbjct: 423 SLLEGLLQRDVNRR 436
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 118/270 (43%), Gaps = 40/270 (14%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR 66
V+G G G V + +F A+K DCP + + E E + CP IVR
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKF----ALKMLQDCPKA----RREVELHWRASQCPHIVR 75
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
+ G + +++E G L R++ + + E + +S+ + ++++HS
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 127 KGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
H D+K +N+L N K+ DFG AK+++ GE+
Sbjct: 136 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--GEK------------------- 174
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF-SLLIRIGVGD-ELPNIP-GDLSE 240
Y+ CD+W+LG + + G P + + + RI +G E PN ++SE
Sbjct: 175 ---YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 231
Query: 241 QGKDFLIKCFLK-DPKRRWTAEMLLNHPFV 269
+ K LI+ LK +P +R T +NHP++
Sbjct: 232 EVK-MLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G+FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 100 HKNIINLLG--ACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 32/266 (12%)
Query: 5 RGDVIGHGSFGSV--NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
R VIG G FG V + K S E P +A+K+ + T K + L + GI
Sbjct: 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVP--VAIKTLK----AGYTEKQRVDFLGEAGIMG 101
Query: 63 Q-----IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM 117
Q I+R G ++ ++ EY G+L D+ ++ +G + R +
Sbjct: 102 QFSHHNIIRLEGVISKYKP----MMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGI 156
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-Y 176
G++++ + +VH D+ +N+LV N K++DFGL++ D E + + P+ +
Sbjct: 157 AAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 216
Query: 177 MSPESVNENEYEAPCDIWALGCAVVE-MASG-KPAW---NHKQDSNVFSLLIRIGVGDEL 231
+PE+++ ++ + D+W+ G + E M G +P W NH+ ++ I G L
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE-------VMKAINDGFRL 269
Query: 232 PNIPGDLSEQGKDFLIKCFLKDPKRR 257
P P D +++C+ ++ RR
Sbjct: 270 PT-PMDCPSAIYQLMMQCWQQERARR 294
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 102/199 (51%), Gaps = 7/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G FG V+L + ++AVK+ ADC P + ++ + + I++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G ++GE+ L++EY GSL D + + + G Q + + + + +G+ ++HS+
Sbjct: 82 KGC--CEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ---LLLFAQQICEGMAYLHSQ 136
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H ++ +NVL+ ++ KI DFGLAK E + E +P++ +PE + E +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 16/196 (8%)
Query: 82 NLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV 141
+L+LE + G L DR+ ++ G E D + +L+ + ++H G VH D+K +N+L
Sbjct: 124 SLVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLY 181
Query: 142 FD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGC 198
+ KIADFGL+K + + C GTP Y +PE + Y D+W++G
Sbjct: 182 ATPAPDAPLKIADFGLSK--IVEHQVLMKTVC-GTPGYCAPEILRGCAYGPEVDMWSVGI 238
Query: 199 AVVEMASG-KPAWNHKQDSNVFSLLIRIGVGDELPNIP---GDLSEQGKDFLIKCFLKDP 254
+ G +P ++ + D +F ++ E I ++S KD + K + DP
Sbjct: 239 ITYILLCGFEPFYDERGDQFMFRRILNC----EYYFISPWWDEVSLNAKDLVRKLIVLDP 294
Query: 255 KRRWTAEMLLNHPFVC 270
K+R T L HP+V
Sbjct: 295 KKRLTTFQALQHPWVT 310
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 17/265 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-CPQI 64
G+++G G V+LA+ + + + A P S L+ +EA + + P I
Sbjct: 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP--SFYLRFRREAQNAAALNHPAI 74
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V + + +++EY +L D V + G + + L
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFS 132
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGER-SQSFECRGTPLYMSPESVN 183
H G +H D+K N+++ + K+ DFG+A+ + G +Q+ GT Y+SPE
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 184 ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPG----DLS 239
+ +A D+++LGC + E+ +G+P + +V +R E P P LS
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-----EDPIPPSARHEGLS 247
Query: 240 EQGKDFLIKCFLKDPKRRW--TAEM 262
++K K+P+ R+ AEM
Sbjct: 248 ADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 27 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----GKAFKNRELQIMRKLDHC-NIVR 77
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S+ C + Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSYIC--SRYYRAPEL 193
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 13/190 (6%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
+++EYAS G L +R+ N GR E + + + + ++ G+ + H+ H D+KL+N L+
Sbjct: 92 IVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL- 148
Query: 143 DNDEA---KIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAP-CDIWALGC 198
D A KI FG +K S SQ GTP Y++PE + + EY+ D+W+ G
Sbjct: 149 DGSPAPRLKICAFGYSKSSVL---HSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 199 AVVEMASGKPAWNHKQDSNVFSLLIR--IGVGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
+ M G + ++ F I + V +P+ +S + + + + F+ DP +
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY-VHISPECRHLISRIFVADPAK 264
Query: 257 RWTAEMLLNH 266
R + + NH
Sbjct: 265 RISIPEIRNH 274
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 27 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----GKAFKNRELQIMRKLDHC-NIVR 77
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S+ C + Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSYIC--SRYYRAPEL 193
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 26/261 (9%)
Query: 9 IGHGSFGSV-----NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+G G FG V N + V + P M+V++ + TL+++K
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDK----------- 69
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+VR Y+ E ++ EY ++GSL D +K G++ + ++ + +G+ +
Sbjct: 70 LVRL----YAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY 125
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
I K ++H D++ NVLV ++ KIADFGLA+ D E + + + +PE++N
Sbjct: 126 IERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAIN 184
Query: 184 ENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ D+W+ G + E+ + GK + + +++V + L + + N P +L
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELY--- 241
Query: 243 KDFLIKCFLKDPKRRWTAEML 263
D + C+ + + R T + L
Sbjct: 242 -DIMKMCWKEKAEERPTFDYL 261
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 30/190 (15%)
Query: 109 DVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
+VK + +L+GL + H + +H D+K QN+L+ + E K+ADFGLA+ S ++++
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---TKTY 157
Query: 169 ECRGTPLYMSPESV--NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIG 226
+ L+ P + +Y D+W +GC EMA+G+P + + RI
Sbjct: 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217
Query: 227 VGDELPNIPGDLSEQ-------------------------GKDFLIKCFLKDPKRRWTAE 261
PG LS + G D L K + + R +AE
Sbjct: 218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAE 277
Query: 262 MLLNHPFVCA 271
+ HPF +
Sbjct: 278 DAMKHPFFLS 287
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G+FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 100 HKNIIHLLGA--CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 18/276 (6%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
+VIG G F V + +F ++ V P S + ++ + P IV
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLA-DRVKKQNNGRL-QESDVKRYTRSMLKGLRH 123
+ YS + ++ E+ L + VK+ + G + E+ Y R +L+ LR+
Sbjct: 90 ELL-ETYS---SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA---KIADFGLAKKSSCDGERSQSFECR-GTPLYMSP 179
H +H D+K VL+ + + K+ FG+A + GE R GTP +M+P
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL---GESGLVAGGRVGTPHFMAP 202
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASG-KPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E V Y P D+W G + + SG P + K+ +F +I+ G P +
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIK-GKYKMNPRQWSHI 259
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
SE KD + + + DP R T LNHP++ D+
Sbjct: 260 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDR 295
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G+FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 100 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 119/276 (43%), Gaps = 18/276 (6%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
+VIG G F V + +F ++ V P S + ++ + P IV
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLA-DRVKKQNNGRL-QESDVKRYTRSMLKGLRH 123
+ YS + ++ E+ L + VK+ + G + E+ Y R +L+ LR+
Sbjct: 92 ELL-ETYS---SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA---KIADFGLAKKSSCDGERSQSFECR-GTPLYMSP 179
H +H D+K VL+ + + K+ FG+A + GE R GTP +M+P
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL---GESGLVAGGRVGTPHFMAP 204
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASG-KPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E V Y P D+W G + + SG P + K+ +F +I+ G P +
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIK-GKYKMNPRQWSHI 261
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADDQ 274
SE KD + + + DP R T LNHP++ D+
Sbjct: 262 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDR 297
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 27 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 77
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S+ C + Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSYIC--SRYYRAPEL 193
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 18 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 75
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 76 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES-VNENEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGXKYY 188
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 248
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 249 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G+FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 100 HKNIITLLGA--CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGER 164
L E + Y + ++KG+ ++H + +H DIK N+LV ++ KIADFG++ + G
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS--NEFKGSD 191
Query: 165 SQSFECRGTPLYMSPESVNENE---YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSL 221
+ GTP +M+PES++E D+WA+G + G+ + D + L
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF---MDERIMCL 248
Query: 222 LIRI-GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
+I E P+ P D++E KD + + K+P+ R + HP+V
Sbjct: 249 HSKIKSQALEFPDQP-DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 114/269 (42%), Gaps = 30/269 (11%)
Query: 7 DVIGHGSFGSVNLA--KASKVSSEFPSLMAVKSCADCPPSSVT----LKNEKEALDQIGI 60
+ IG GS+G V +A K +++ ++ P V K E E + +
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIR---------RAAKKIPKYFVEDVDRFKQEIEIMKSLD- 64
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P I+R + +FE Y L++E + G L +RV + R ESD R + +L
Sbjct: 65 HPNIIRLYE---TFEDNTDIY-LVMELCTGGELFERVVHKRVFR--ESDAARIMKDVLSA 118
Query: 121 LRHIHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
+ + H H D+K +N L + K+ DFGLA + GTP Y+
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---GTPYYV 175
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGD 237
SP+ V E Y CD W+ G + + G P ++ D V L IR G +
Sbjct: 176 SPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM-LKIREGTFTFPEKDWLN 233
Query: 238 LSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
+S Q + + + K PK+R T+ L H
Sbjct: 234 VSPQAESLIRRLLTKSPKQRITSLQALEH 262
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 64/311 (20%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKE-----ALDQIGICP- 62
IG G+FG V A+ K + +A+K V ++NEKE AL +I I
Sbjct: 26 IGQGTFGEVFKARHRKTGQK----VALKK--------VLMENEKEGFPITALREIKILQL 73
Query: 63 ----------QIVRCFGDDYSFEKGERFYNL-LLEYASRGSLADRVKKQNNGRLQESDVK 111
+I R Y+ KG + E+ G L++ + K S++K
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-----FTLSEIK 128
Query: 112 RYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKK-SSCDGERSQSFEC 170
R + +L GL +IH +H D+K NVL+ + K+ADFGLA+ S + +
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 171 RGTPLYMSPES--VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI--G 226
R L+ P + E +Y P D+W GC + EM + P + + +L+ ++
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 248
Query: 227 VGDEL-PNIPG-DLSEQ-----------------------GKDFLIKCFLKDPKRRWTAE 261
+ E+ PN+ +L E+ D + K + DP +R ++
Sbjct: 249 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 308
Query: 262 MLLNHPFVCAD 272
LNH F +D
Sbjct: 309 DALNHDFFWSD 319
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 11 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 69 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES-VNENEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGXKYY 181
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G+FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 100 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 64/311 (20%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKE-----ALDQIGICP- 62
IG G+FG V A+ K + +A+K V ++NEKE AL +I I
Sbjct: 26 IGQGTFGEVFKARHRKTGQK----VALKK--------VLMENEKEGFPITALREIKILQL 73
Query: 63 ----------QIVRCFGDDYSFEKGERFYNL-LLEYASRGSLADRVKKQNNGRLQESDVK 111
+I R Y+ KG + E+ G L++ + K S++K
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-----FTLSEIK 128
Query: 112 RYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKK-SSCDGERSQSFEC 170
R + +L GL +IH +H D+K NVL+ + K+ADFGLA+ S + +
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 171 RGTPLYMSPES--VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI--G 226
R L+ P + E +Y P D+W GC + EM + P + + +L+ ++
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 248
Query: 227 VGDEL-PNIPG-DLSEQ-----------------------GKDFLIKCFLKDPKRRWTAE 261
+ E+ PN+ +L E+ D + K + DP +R ++
Sbjct: 249 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 308
Query: 262 MLLNHPFVCAD 272
LNH F +D
Sbjct: 309 DALNHDFFWSD 319
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 114/269 (42%), Gaps = 30/269 (11%)
Query: 7 DVIGHGSFGSVNLA--KASKVSSEFPSLMAVKSCADCPPSSVT----LKNEKEALDQIGI 60
+ IG GS+G V +A K +++ ++ P V K E E + +
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIR---------RAAKKIPKYFVEDVDRFKQEIEIMKSLD- 81
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
P I+R + +FE Y L++E + G L +RV + R ESD R + +L
Sbjct: 82 HPNIIRLYE---TFEDNTDIY-LVMELCTGGELFERVVHKRVFR--ESDAARIMKDVLSA 135
Query: 121 LRHIHSKGFVHCDIKLQNVLVFD---NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
+ + H H D+K +N L + K+ DFGLA + GTP Y+
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV---GTPYYV 192
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGD 237
SP+ V E Y CD W+ G + + G P ++ D V L IR G +
Sbjct: 193 SPQ-VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM-LKIREGTFTFPEKDWLN 250
Query: 238 LSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
+S Q + + + K PK+R T+ L H
Sbjct: 251 VSPQAESLIRRLLTKSPKQRITSLQALEH 279
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 102/199 (51%), Gaps = 7/199 (3%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G FG V+L + ++AVK+ ADC P + ++ + + I++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G ++GE+ L++EY GSL D + + + G Q + + + + +G+ ++H++
Sbjct: 82 KGC--CEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ---LLLFAQQICEGMAYLHAQ 136
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNENE 186
++H ++ +NVL+ ++ KI DFGLAK E + E +P++ +PE + E +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 187 YEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ +
Sbjct: 197 FYYASDVWSFGVTLYELLT 215
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 64/311 (20%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKE-----ALDQIGICP- 62
IG G+FG V A+ K + +A+K V ++NEKE AL +I I
Sbjct: 25 IGQGTFGEVFKARHRKTGQK----VALKK--------VLMENEKEGFPITALREIKILQL 72
Query: 63 ----------QIVRCFGDDYSFEKGERFYNL-LLEYASRGSLADRVKKQNNGRLQESDVK 111
+I R Y+ KG + E+ G L++ + K S++K
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-----FTLSEIK 127
Query: 112 RYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKK-SSCDGERSQSFEC 170
R + +L GL +IH +H D+K NVL+ + K+ADFGLA+ S + +
Sbjct: 128 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 171 RGTPLYMSPES--VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI--G 226
R L+ P + E +Y P D+W GC + EM + P + + +L+ ++
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 247
Query: 227 VGDEL-PNIPG-DLSEQ-----------------------GKDFLIKCFLKDPKRRWTAE 261
+ E+ PN+ +L E+ D + K + DP +R ++
Sbjct: 248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 307
Query: 262 MLLNHPFVCAD 272
LNH F +D
Sbjct: 308 DALNHDFFWSD 318
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
AD K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 130 ADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 189
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 190 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 250 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 309
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 310 LDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 40 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 90
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S+ C + Y +PE
Sbjct: 151 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSYIC--SRYYRAPEL 206
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 114/269 (42%), Gaps = 41/269 (15%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 29 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 64
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLADRVK-----------KQNNGRLQESDVKR 112
+ F ++ + R N+LL Y+++ LA + + + + +
Sbjct: 65 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLID 124
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
R +G+ ++H+K +H D+K N+ + +++ KI DFGLA + S Q + G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 173 TPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRIGVG 228
+ L+M+PE + + N Y D++A G + E+ +G+ P N + ++ R +
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+L + + ++ K + +C K R
Sbjct: 245 PDLSKVRSNCPKRMKRLMAECLKKKRDER 273
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 127/279 (45%), Gaps = 28/279 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 27 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 87 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 143 FKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
+ R +M+PE++ + Y D+W+ G + E+ + G + +F LL
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 262
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLL 264
D+ N +L +D C+ P +R T + L+
Sbjct: 263 HRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLV 297
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSS----VTLKNEKEALDQIGICPQI 64
+G G FG V L + +AVKS P S LK E E L + I
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK--PESGGNHIADLKKEIEILRNL-YHENI 85
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V+ G E G L++E+ GSL + + K N ++ +Y + KG+ ++
Sbjct: 86 VKYKG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYL 142
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVN 183
S+ +VH D+ +NVLV + KI DFGL K D E + R +P++ +PE +
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 184 ENEYEAPCDIWALGCAVVEMAS 205
++++ D+W+ G + E+ +
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSS----VTLKNEKEALDQIGICPQI 64
+G G FG V L + +AVKS P S LK E E L + I
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK--PESGGNHIADLKKEIEILRNL-YHENI 73
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
V+ G E G L++E+ GSL + + K N ++ +Y + KG+ ++
Sbjct: 74 VKYKG--ICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYL 130
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVN 183
S+ +VH D+ +NVLV + KI DFGL K D E + R +P++ +PE +
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 184 ENEYEAPCDIWALGCAVVEMAS 205
++++ D+W+ G + E+ +
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 111 KRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFEC 170
K Y ++ML+ + IH G VH D+K N L+ D K+ DFG+A + D
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 171 RGTPLYMSPESVNE-----------NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
G YM PE++ + ++ D+W+LGC + M GK + +Q N
Sbjct: 217 VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQI 274
Query: 220 SLLIRI---GVGDELPNIP-GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S L I E P+IP DL +D L C +DPK+R + LL HP+V
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G+FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 100 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ +IADFGLA+ + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 32/225 (14%)
Query: 75 EKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDI 134
+K +R+Y L+ E+ ++ D ++ NG L V++Y ++ G+ HS +H DI
Sbjct: 94 KKKKRWY-LVFEFVDH-TILDDLELFPNG-LDYQVVQKYLFQIINGIGFCHSHNIIHRDI 150
Query: 135 KLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE-SVNENEYEAPCDI 193
K +N+LV + K+ DFG A+ + GE + T Y +PE V + +Y D+
Sbjct: 151 KPENILVSQSGVVKLCDFGFARTLAAPGEVYD--DEVATRWYRAPELLVGDVKYGKAVDV 208
Query: 194 WALGCAVVEMASGKPAWNHKQD-SNVFSLLIRIG----------------VGDELPNIPG 236
WA+GC V EM G+P + D ++ +++ +G G LP I
Sbjct: 209 WAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKE 268
Query: 237 ---------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
LSE D KC DP +R LL+H F D
Sbjct: 269 REPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 32 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 82
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S+ C + Y +PE
Sbjct: 143 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSYIC--SRYYRAPEL 198
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIG 59
+ + VIG+GSFG V AK S E L+A+K KN E + + ++
Sbjct: 48 VSYTDTKVIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLD 99
Query: 60 ICPQIVRCFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRS 116
C IVR YS +K E + NL+L+Y R + L VK Y
Sbjct: 100 HC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTP 174
+ + L +IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S+ C +
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSYIC--SR 214
Query: 175 LYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAW 210
Y +PE + +Y + D+W+ GC + E+ G+P +
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV-- 65
VIG+GSFG V AK + S E +A+K KN + + +I P +V
Sbjct: 47 VIGNGSFGVVFQAKLVE-SDE----VAIKKVLQ----DKRFKNRELQIMRIVKHPNVVDL 97
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+ F +K E F NL+LEY A R + + +K Y +L+ L +I
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 125 HSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESV- 182
HS G H DIK QN+L+ + K+ DFG A K GE + S C + Y +PE +
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDFGSA-KILIAGEPNVSXIC--SRYYRAPELIF 214
Query: 183 NENEYEAPCDIWALGCAVVEMASGKPAW 210
Y DIW+ GC + E+ G+P +
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIG 59
+ + VIG+GSFG V AK S E L+A+K KN E + + ++
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLD 105
Query: 60 ICPQIVRCFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRS 116
C IVR YS +K E + NL+L+Y R + L VK Y
Sbjct: 106 HC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTP 174
+ + L +IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S+ C +
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSYIC--SR 220
Query: 175 LYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAW 210
Y +PE + +Y + D+W+ GC + E+ G+P +
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 127/279 (45%), Gaps = 28/279 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 29 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 89 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 145 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
+ R +M+PE++ + Y D+W+ G + E+ + G + +F LL
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 264
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLL 264
D+ N +L +D C+ P +R T + L+
Sbjct: 265 HRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLV 299
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 127/279 (45%), Gaps = 28/279 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 32 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 92 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 148 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
+ R +M+PE++ + Y D+W+ G + E+ + G + +F LL
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 267
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLL 264
D+ N +L +D C+ P +R T + L+
Sbjct: 268 HRMDKPANCTNELYMMMRD----CWHAVPSQRPTFKQLV 302
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 11 IGEGTYGVVYKAR-NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 69 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 181
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 10 IGEGTYGVVYKAR-NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 67
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 68 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 180
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 41/269 (15%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 17 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 52
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLADRVK-----------KQNNGRLQESDVKR 112
+ F ++ + R N+LL Y+++ LA + + + + +
Sbjct: 53 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLID 112
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
R +G+ ++H+K +H D+K N+ + +++ KI DFGLA S Q + G
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG 172
Query: 173 TPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRIGVG 228
+ L+M+PE + + N Y D++A G + E+ +G+ P N + ++ R +
Sbjct: 173 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 232
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+L + + ++ K + +C K R
Sbjct: 233 PDLSKVRSNCPKRMKRLMAECLKKKRDER 261
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 26/261 (9%)
Query: 9 IGHGSFGSV-----NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+G G FG V N + V + P M+V++ + TL+++K
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDK----------- 68
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+VR + K E Y ++ E+ ++GSL D +K G++ + ++ + +G+ +
Sbjct: 69 LVRLYA---VVTKEEPIY-IITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY 124
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
I K ++H D++ NVLV ++ KIADFGLA+ D E + + + +PE++N
Sbjct: 125 IERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAIN 183
Query: 184 ENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ ++W+ G + E+ + GK + + +++V S L + + N P +L
Sbjct: 184 FGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELY--- 240
Query: 243 KDFLIKCFLKDPKRRWTAEML 263
D + C+ + + R T + L
Sbjct: 241 -DIMKMCWKEKAEERPTFDYL 260
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 106 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 156
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S+ C + Y +PE
Sbjct: 217 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSYIC--SRYYRAPEL 272
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIG 59
+ + VIG+GSFG V AK S E L+A+K KN E + + ++
Sbjct: 56 VSYTDTKVIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLD 107
Query: 60 ICPQIVRCFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRS 116
C IVR YS +K E + NL+L+Y R + L VK Y
Sbjct: 108 HC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTP 174
+ + L +IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S+ C +
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSYIC--SR 222
Query: 175 LYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAW 210
Y +PE + +Y + D+W+ GC + E+ G+P +
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFG 171
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 172 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 231
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 232 GKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 291
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFVC 270
L K +P +R E L HP++
Sbjct: 292 LDKMLTFNPHKRIEVEQALAHPYLA 316
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 71
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y +++EY S+GSL D +K + L+ + + G
Sbjct: 72 HEKLVQL----YAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPE 185
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 241
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 11 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L D + + +K Y +L+GL HS
Sbjct: 69 DVIHT----ENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K +N+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 181
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIG 59
+ + VIG+GSFG V AK S E L+A+K KN E + + ++
Sbjct: 58 VSYTDTKVIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLD 109
Query: 60 ICPQIVRCFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRS 116
C IVR YS +K E + NL+L+Y R + L VK Y
Sbjct: 110 HC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTP 174
+ + L +IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S+ C +
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSYIC--SR 224
Query: 175 LYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAW 210
Y +PE + +Y + D+W+ GC + E+ G+P +
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 11 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 69 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 181
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 145
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++EYAS+G+L + ++ + ++ S D+ R
Sbjct: 146 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 71
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y +++EY S+GSL D +K + L+ + + G
Sbjct: 72 HEKLVQL----YAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 241
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 11 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 69 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 181
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 105/212 (49%), Gaps = 24/212 (11%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 27 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----GKAFKNRELQIMRKLDHC-NIVR 77
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDV---KRYTRSMLKGL 121
YS +K E + NL+L+Y + RV + + Q V K Y + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP--ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C + Y +P
Sbjct: 136 AYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SRYYRAP 191
Query: 180 ESV-NENEYEAPCDIWALGCAVVEMASGKPAW 210
E + +Y + D+W+ GC + E+ G+P +
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 10 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 67
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 68 DVIHT----ENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 180
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 18 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 75
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 76 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 188
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 248
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 249 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 12 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 69
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 70 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 182
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 10 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 67
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 68 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 180
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFG 169
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 170 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 230 GKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 289
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 290 LDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + +I
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKIR- 71
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 72 HEKLVQL----YAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 241
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 11 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 69 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 181
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 10 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 67
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 68 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 180
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 88/210 (41%), Gaps = 40/210 (19%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEA-KIADF 152
D G L E + + +L+GL++IHS +H D+K N+ + D KI DF
Sbjct: 106 TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDF 165
Query: 153 GLAK----KSSCDGERSQSFEC---RGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS 205
GLA+ S G S+ R L +SP N Y D+WA GC EM +
Sbjct: 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP-----NNYTKAIDMWAAGCIFAEMLT 220
Query: 206 GKPAWN------------------HKQDSNVFSLLIRIGVGDELPN--------IPGDLS 239
GK + H++D +I + + +++ +PG +S
Sbjct: 221 GKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPG-IS 279
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+ DFL + P R TAE L+HP++
Sbjct: 280 REAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 41/269 (15%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 29 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 64
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLADRVK-----------KQNNGRLQESDVKR 112
+ F ++ + R N+LL Y++ LA + + + + +
Sbjct: 65 QAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLID 124
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
R +G+ ++H+K +H D+K N+ + +++ KI DFGLA + S Q + G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 173 TPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRIGVG 228
+ L+M+PE + + N Y D++A G + E+ +G+ P N + ++ R +
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+L + + ++ K + +C K R
Sbjct: 245 PDLSKVRSNCPKRMKRLMAECLKKKRDER 273
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 28 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 78
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C + Y +PE
Sbjct: 139 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SRYYRAPEL 194
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 15 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 72
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 73 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ + E T Y +PE + Y
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYTHEVV-TLWYRAPEILLGCKYY 185
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 245
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 246 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 27 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 77
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C + Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SRYYRAPEL 193
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 173
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 234 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 293
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 294 LDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 173
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 234 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 293
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 294 LDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR 66
DVIG G+FG V A+ K + + E E L ++G P I+
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQ--------------NNGRLQESDVKR 112
G + E Y L +EYA G+L D ++K L +
Sbjct: 81 LLG---ACEHRGYLY-LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ + +G+ ++ K F+H D+ +N+LV +N AKIADFGL++ +++ R
Sbjct: 137 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG---RL 193
Query: 173 TPLYMSPESVNENEYEAPCDIWALGCAVVEMAS--GKP 208
+M+ ES+N + Y D+W+ G + E+ S G P
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 169
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 170 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 230 GKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 289
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 290 LDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFG 169
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 170 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 230 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 289
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 290 LDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
IG G++GSV A K+S F S++ K + L + + IG
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 90
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 91 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 141
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRW---YRAP 196
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 255
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 287
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 27 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 77
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C + Y +PE
Sbjct: 138 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SRYYRAPEL 193
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 110/278 (39%), Gaps = 22/278 (7%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEAL---DQIGICPQI 64
VIG G+F V + K + + + K + E++ L D+ I Q+
Sbjct: 68 VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWIT-QL 126
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
F D E + L++EY G L + K R+ + Y ++ + +
Sbjct: 127 HFAFQD-------ENYLYLVMEYYVGGDLLTLLSKFGE-RIPAEMARFYLAEIVMAIDSV 178
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
H G+VH DIK N+L+ ++ADFG K DG +S GTP Y+SPE +
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQA 237
Query: 185 -------NEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGD 237
Y CD WALG EM G+ + + + ++ LP +
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEG 297
Query: 238 LSEQGKDFLIKCFLKDPKR--RWTAEMLLNHPFVCADD 273
+ E+ +DF+ + R R A HPF D
Sbjct: 298 VPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLD 335
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR 66
DVIG G+FG V A+ K + + E E L ++G P I+
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQ--------------NNGRLQESDVKR 112
G + E Y L +EYA G+L D ++K L +
Sbjct: 91 LLG---ACEHRGYLY-LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ + +G+ ++ K F+H D+ +N+LV +N AKIADFGL++ +++ R
Sbjct: 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG---RL 203
Query: 173 TPLYMSPESVNENEYEAPCDIWALGCAVVEMAS--GKP 208
+M+ ES+N + Y D+W+ G + E+ S G P
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G+FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++ YAS+G+L + ++ + ++ S D+ R
Sbjct: 100 HKNIINLLGA--CTQDGPLY--VIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 62
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 63 HEKLVQL----YAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 117
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 118 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 176
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 232
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 233 ESLHDLMCQCWRKDPEERPTFEYL 256
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 31 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 81
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C + Y +PE
Sbjct: 142 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SRYYRAPEL 197
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 129/311 (41%), Gaps = 64/311 (20%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKE-----ALDQIGICP- 62
IG G+FG V A+ K + +A+K V ++NEKE AL +I I
Sbjct: 26 IGQGTFGEVFKARHRKTGQK----VALKK--------VLMENEKEGFPITALREIKILQL 73
Query: 63 ----------QIVRCFGDDYSFEKGERFYNL-LLEYASRGSLADRVKKQNNGRLQESDVK 111
+I R Y+ K + E+ G L++ + K S++K
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-----FTLSEIK 128
Query: 112 RYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKK-SSCDGERSQSFEC 170
R + +L GL +IH +H D+K NVL+ + K+ADFGLA+ S + +
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 171 RGTPLYMSPES--VNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI--G 226
R L+ P + E +Y P D+W GC + EM + P + + +L+ ++
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 248
Query: 227 VGDEL-PNIPG-DLSEQ-----------------------GKDFLIKCFLKDPKRRWTAE 261
+ E+ PN+ +L E+ D + K + DP +R ++
Sbjct: 249 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSD 308
Query: 262 MLLNHPFVCAD 272
LNH F +D
Sbjct: 309 DALNHDFFWSD 319
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 60
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 61 HEKLVQL----YAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 115
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 116 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 174
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 230
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 231 ESLHDLMCQCWRKDPEERPTFEYL 254
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 12 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 69
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 70 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 182
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 11 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 69 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 181
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 39 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 89
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C + Y +PE
Sbjct: 150 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SRYYRAPEL 205
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 14 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 71
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 72 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 13 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 70
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 71 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 183
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 14 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 71
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 72 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 14 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 71
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 72 DVIHT----ENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 35 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 85
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C + Y +PE
Sbjct: 146 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SRYYRAPEL 201
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 87
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 88 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 138
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT--DDEMTGYVATRW---YRAP 193
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 252
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 284
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 11 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 69 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 181
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 10 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 67
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 68 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 180
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 33/260 (12%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV K+S F SL+ + LK+E + IG
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE----NVIG 91
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E Y L+ L + VK Q L + V+ +L+
Sbjct: 92 L----LDVFTPATSIEDFSEVY--LVTTLMGADLNNIVKSQA---LSDEHVQFLVYQLLR 142
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS G +H D+K NV V ++ E +I DFGLA+++ D E + R Y +P
Sbjct: 143 GLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA--DEEMTGYVATR---WYRAP 197
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIG--VGDELPNIPG 236
E +N Y DIW++GC + E+ GK + S+ L RI VG P +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALF---PGSDYIDQLKRIMEVVGTPSPEVLA 254
Query: 237 DLSEQGKDFLIKCFLKDPKR 256
+S + I+ P++
Sbjct: 255 KISSEHARTYIQSLPPMPQK 274
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 11 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 69 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 181
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 91
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 92 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 142
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT--DDEMTGYVATRW---YRAP 197
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 256
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 11 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 69 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 181
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 14 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 71
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 72 DVIHT----ENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 13 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 70
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 71 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 183
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 10 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 67
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 68 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 180
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 46 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 96
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C + Y +PE
Sbjct: 157 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SRYYRAPEL 212
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 15 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 72
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 73 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 185
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 245
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 246 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 12 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 69
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 70 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K QN+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 182
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 39 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 89
Query: 67 CFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
YS +K E + NL+L+Y R + L VK Y + + L +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C + Y +PE
Sbjct: 150 IHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SRYYRAPEL 205
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKPAW 210
+ +Y + D+W+ GC + E+ G+P +
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 103 GRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDG 162
G L+ K + +L G+ + H + +H D+K QN+L+ E KIADFGLA+
Sbjct: 95 GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP- 153
Query: 163 ERSQSFECRGTPLYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSL 221
R + E T Y +P+ + +Y DIW++GC EM +G P + +++
Sbjct: 154 VRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR 212
Query: 222 LIRI-GVGD--------ELPN----------IPGD-----LSEQGKDFLIKCFLKDPKRR 257
+ RI G + ELP +P + L E G D L K DP +R
Sbjct: 213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQR 272
Query: 258 WTAEMLLNHPF 268
TA+ L H +
Sbjct: 273 ITAKQALEHAY 283
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 103 GRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDG 162
G L+ K + +L G+ + H + +H D+K QN+L+ E KIADFGLA+
Sbjct: 95 GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP- 153
Query: 163 ERSQSFECRGTPLYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSL 221
R + E T Y +P+ + +Y DIW++GC EM +G P + +++
Sbjct: 154 VRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMR 212
Query: 222 LIRI-GVGD--------ELPN----------IPGD-----LSEQGKDFLIKCFLKDPKRR 257
+ RI G + ELP +P + L E G D L K DP +R
Sbjct: 213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQR 272
Query: 258 WTAEMLLNHPF 268
TA+ L H +
Sbjct: 273 ITAKQALEHAY 283
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPS---LMAVKSCAD--CPPSSVTLKNEKEALDQIGI 60
G +G G+FG V +A+A + + P +AVK D L +E E + IG
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES-DVKRY------ 113
I+ G + G + +++ YAS+G+L + ++ + ++ S D+ R
Sbjct: 100 HKNIINLLGA--CTQDGPLY--VIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 114 -------TRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
T + +G+ ++ S+ +H D+ +NVLV +N+ KIADFGLA+ + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 71
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 72 HEKLVQL----YAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 241
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 90
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 91 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 141
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRW---YRAP 196
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 255
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 103 GRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDG 162
G L+ K + +L G+ + H + +H D+K QN+L+ E KIADFGLA+
Sbjct: 95 GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP- 153
Query: 163 ERSQSFECRGTPLYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSL 221
R + E T Y +P+ + +Y DIW++GC EM +G P + +++
Sbjct: 154 VRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR 212
Query: 222 LIRI-GVGD--------ELPN----------IPGD-----LSEQGKDFLIKCFLKDPKRR 257
+ RI G + ELP +P + L E G D L K DP +R
Sbjct: 213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQR 272
Query: 258 WTAEMLLNHPF 268
TA+ L H +
Sbjct: 273 ITAKQALEHAY 283
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 24/271 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G G FG V + + K NEK+ L+++ + V
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN--SRFVVS 248
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y++E + L+L + G L + E+ Y + GL +H +
Sbjct: 249 LA--YAYETKDAL-CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECR-GTPLYMSPESVNENE 186
V+ D+K +N+L+ D+ +I+D GLA Q+ + R GT YM+PE V
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVP----EGQTIKGRVGTVGYMAPEVVKNER 361
Query: 187 YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE----QG 242
Y D WALGC + EM +G+ + ++ + R V + +P + SE Q
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKK-----IKREEVERLVKEVPEEYSERFSPQA 416
Query: 243 KDFLIKCFLKDPKRRW-----TAEMLLNHPF 268
+ + KDP R +A + HP
Sbjct: 417 RSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 96
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 97 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 147
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRW---YRAP 202
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 261
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 262 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 293
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K + +L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 130 TDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFG 189
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + + + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 190 LARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPGDLS-----------EQGKDF 245
K Q +++ +L I + + L ++P + D
Sbjct: 250 GKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDL 309
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L + +P +R T E L HP++
Sbjct: 310 LDRMLTFNPNKRITVEEALAHPYL 333
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 12 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 69
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ S L + + +K Y +L+GL HS
Sbjct: 70 DVIHT----ENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K +N+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 182
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 169
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 170 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 230 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 289
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 290 LDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 14 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 71
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ S L + + +K Y +L+GL HS
Sbjct: 72 DVIHT----ENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K +N+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 184
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 71
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 72 HEKLVQL----YAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 241
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 130 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 189
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 190 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 250 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 309
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 310 LDKMLTFNPHKRIEVEQALAHPYL 333
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 108 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 167
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 168 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 227
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 228 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 287
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 288 LDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 115 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 174
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 175 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 234
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 235 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 294
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 295 LDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 116 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 175
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 176 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 235
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 236 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 295
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 296 LDKMLTFNPHKRIEVEQALAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 107 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 166
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 167 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 226
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 227 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 286
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 287 LDKMLTFNPHKRIEVEQALAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 234 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 293
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 294 LDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 118 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 177
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 178 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 237
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 238 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 297
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 298 LDKMLTFNPHKRIEVEQALAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 110 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 169
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 170 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 230 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 289
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 290 LDKMLTFNPHKRIEVEQALAHPYL 313
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 171
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 172 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 231
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 232 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 291
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFVC 270
L K +P +R E L HP++
Sbjct: 292 LDKMLTFNPHKRIEVEQALAHPYLA 316
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 112 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 171
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 172 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 231
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 232 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 291
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 292 LDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 108 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 167
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 168 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 227
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 228 GKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 287
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 288 LDKMLTFNPHKRIEVEQALAHPYL 311
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 234 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 293
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 294 LDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 64
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 65 HEKLVQL----YAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 120 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 178
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 234
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ K+P+ R T E L
Sbjct: 235 ESLHDLMCQCWRKEPEERPTFEYL 258
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 114 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 173
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 174 LARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 234 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 293
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 294 LDKMLTFNPHKRIEVEQALAHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 94 ADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFG 153
D K L + + +L+GL++IHS +H D+K N+L+ + KI DFG
Sbjct: 115 TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFG 174
Query: 154 LAKKSSCDGERSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
LA+ + D + + E T Y +PE +N Y DIW++GC + EM S +P +
Sbjct: 175 LARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 234
Query: 212 HK----QDSNVFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDF 245
K Q +++ +L I + + L ++P + + D
Sbjct: 235 GKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL 294
Query: 246 LIKCFLKDPKRRWTAEMLLNHPFV 269
L K +P +R E L HP++
Sbjct: 295 LDKMLTFNPHKRIEVEQALAHPYL 318
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKSQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGL + + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 24/271 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G G FG V + + K NEK+ L+++ + V
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN--SRFVVS 248
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
Y++E + L+L + G L + E+ Y + GL +H +
Sbjct: 249 LA--YAYETKDAL-CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECR-GTPLYMSPESVNENE 186
V+ D+K +N+L+ D+ +I+D GLA Q+ + R GT YM+PE V
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVP----EGQTIKGRVGTVGYMAPEVVKNER 361
Query: 187 YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE----QG 242
Y D WALGC + EM +G+ + ++ + R V + +P + SE Q
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKK-----IKREEVERLVKEVPEEYSERFSPQA 416
Query: 243 KDFLIKCFLKDPKRRW-----TAEMLLNHPF 268
+ + KDP R +A + HP
Sbjct: 417 RSLCSQLLCKDPAERLGCRGGSAREVKEHPL 447
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIG 59
+ + VIG+GSFG V AK S E L+A+K KN E + + ++
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLD 105
Query: 60 ICPQIVRCFGDDYSF--EKGERFYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRS 116
C IVR YS +K E + NL+L+Y R + L VK Y
Sbjct: 106 HC-NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTP 174
+ + L +IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C +
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SR 220
Query: 175 LYMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAW 210
Y +PE + +Y + D+W+ GC + E+ G+P +
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 71
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y +++EY S+G L D +K + L+ + + G
Sbjct: 72 HEKLVQL----YAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 241
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGXVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 106/242 (43%), Gaps = 28/242 (11%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSV--TLKNEKEALDQIGICP 62
G V+G G+FG V A A +S S+ +AVK + SS L +E + + Q+G
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 63 QIVR------------------CFGD--DYSFEKGERFYNLLLEYASRGSLADRVKKQNN 102
IV C+GD +Y K E+F +EY ++ L + +++
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE---EEDL 166
Query: 103 GRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDG 162
L D+ + + KG+ + K VH D+ +NVLV KI DFGLA+ D
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 163 ERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFS 220
R +M+PES+ E Y D+W+ G + E+ S P D+N +
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK 286
Query: 221 LL 222
L+
Sbjct: 287 LI 288
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 83
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 84 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 134
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 135 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 189
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 248
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 249 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 280
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 81
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 82 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 132
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 187
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 246
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 278
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR 66
DVIG G+FG V A+ K + + E E L ++G P I+
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESD----VKRYTRSML---- 118
G + E Y L +EYA G+L D ++K R+ E+D + T S L
Sbjct: 88 LLG---ACEHRGYLY-LAIEYAPHGNLLDFLRK---SRVLETDPAFAIANSTASTLSSQQ 140
Query: 119 ---------KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+G+ ++ K F+H ++ +N+LV +N AKIADFGL++ +++
Sbjct: 141 LLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG-- 198
Query: 170 CRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS--GKP 208
R +M+ ES+N + Y D+W+ G + E+ S G P
Sbjct: 199 -RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 82
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 83 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 133
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 188
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 247
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 279
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 82
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 83 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 133
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 188
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 247
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 279
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGER 164
L + V+ +L+GL++IHS G +H D+K NV V ++ E +I DFGLA+++ D E
Sbjct: 128 LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA--DEEM 185
Query: 165 SQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI 223
+ R Y +PE +N Y DIW++GC + E+ GK + S+ L
Sbjct: 186 TGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF---PGSDYIDQLK 239
Query: 224 RIG--VGDELPNIPGDLSEQGKDFLIKCFLKDPKR 256
RI VG P + +S + I+ P++
Sbjct: 240 RIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQK 274
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 71
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 72 HEKLVQL----YAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D+ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 127 MAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 241
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 237
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 238 HEKLVQL----YAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 351
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 407
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ K+P+ R T E L
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 105
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 106 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 156
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 211
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 270
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 271 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 302
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 90
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 91 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 141
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 196
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 255
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 287
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 81
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 82 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 132
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 187
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 246
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAV 278
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 104
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 105 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 155
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 210
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 269
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 270 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 301
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 6/182 (3%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++ EY S+GSL D +K + L+ + + G+ ++ +VH D++ N+LV
Sbjct: 79 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 138
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVE 202
+N K+ADFGLA+ D E + + + +PE+ + D+W+ G + E
Sbjct: 139 ENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 197
Query: 203 MAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAE 261
+ + G+ + + V + R G +P P + E D + +C+ K+P+ R T E
Sbjct: 198 LTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECPESLHDLMCQCWRKEPEERPTFE 253
Query: 262 ML 263
L
Sbjct: 254 YL 255
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 237
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 238 HEKLVQL----YAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 351
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 407
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ K+P+ R T E L
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 87
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 88 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 138
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 193
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 252
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 284
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 90
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 91 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 141
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 196
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 255
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 287
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY----RELRLLKHMKHENVIG 97
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 98 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 148
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 203
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 262
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 294
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 87
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 88 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 138
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 193
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 252
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 284
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 84
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 85 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 135
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 136 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 190
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 249
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 250 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 281
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 96
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 97 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 147
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 202
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 261
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 262 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 293
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 108
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 109 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 159
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 214
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 273
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 305
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 13 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 70
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 71 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K +N+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 183
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 87
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 88 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 138
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 193
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 252
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 284
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 92
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 93 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 143
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 198
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 257
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 289
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG G++G V A+ +K++ E +L ++ + T E L ++ P IV+
Sbjct: 12 IGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLL 69
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
++ E L+ E+ + L + + +K Y +L+GL HS
Sbjct: 70 DVIHT----ENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE-NEY 187
+H D+K +N+L+ K+ADFGLA+ R+ E T Y +PE + Y
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVP-VRTYXHEVV-TLWYRAPEILLGCKYY 182
Query: 188 EAPCDIWALGCAVVEMASGKPAW-NHKQDSNVFSLLIRIGVGDEL------------PNI 234
DIW+LGC EM + + + + +F + +G DE+ P+
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 235 PG-----------DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
P L E G+ L + DP +R +A+ L HPF
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 104
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 105 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 155
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 210
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 269
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 270 SSESARNYIQSLAQMPKMNFANVFIGANPLAV 301
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 102/212 (48%), Gaps = 24/212 (11%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGICPQIVR 66
VIG+GSFG V AK S E L+A+K KN E + + ++ C IVR
Sbjct: 27 VIGNGSFGVVYQAKLCD-SGE---LVAIKKVLQ----DKRFKNRELQIMRKLDHC-NIVR 77
Query: 67 CFGDDYSFEKGER----FYNLLLEYASRGSL-ADRVKKQNNGRLQESDVKRYTRSMLKGL 121
+ + GE+ + NL+L+Y R + L VK Y + + L
Sbjct: 78 L--RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+IHS G H DIK QN+L+ D D A K+ DFG AK+ GE + S C + Y +P
Sbjct: 136 AYIHSFGICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQ-LVRGEPNVSXIC--SRYYRAP 191
Query: 180 ESV-NENEYEAPCDIWALGCAVVEMASGKPAW 210
E + +Y + D+W+ GC + E+ G+P +
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 97
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 98 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 148
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 203
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 262
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 294
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP---SLMAVKSC-ADCPPSSVT-LKNEKEALDQIGI 60
G +G G+FG V LA+A + + P + +AVK +D ++ L +E E + IG
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQN--------------NGRLQ 106
I+ G + G + +++EYAS+G+L + ++ + +L
Sbjct: 93 HKNIINLLG--ACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLS 148
Query: 107 ESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
D+ + +G+ ++ SK +H D+ +NVLV +++ KIADFGLA+ +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 97
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 98 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 148
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 203
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 262
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 294
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 68
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY ++GSL D +K + L+ + + + G
Sbjct: 69 HEKLVQL----YAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 182
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 238
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ K+P+ R T E L
Sbjct: 239 ESLHDLMCQCWRKEPEERPTFEYL 262
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 105
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 106 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 156
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 211
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 270
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAV 302
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 95
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 96 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 146
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 147 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 201
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 260
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 261 SSESARNYIQSLAQMPKMNFANVFIGANPLAV 292
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 28/194 (14%)
Query: 104 RLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGE 163
L + + +L+GL++IHS +H D+K N+L+ + KI DFGLA+ + D +
Sbjct: 124 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 164 RSQSF-ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHK----QDSN 217
+ E T Y +PE +N Y DIW++GC + EM S +P + K Q ++
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 243
Query: 218 VFSLL-----------IRIGVGDELPNIPG-----------DLSEQGKDFLIKCFLKDPK 255
+ +L I + + L ++P + + D L K +P
Sbjct: 244 ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPH 303
Query: 256 RRWTAEMLLNHPFV 269
+R E L HP++
Sbjct: 304 KRIEVEQALAHPYL 317
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 91
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 92 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 142
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 197
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 256
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 288
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAV 282
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 91
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 92 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 142
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 197
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 256
Query: 239 SEQGKDFLIKCFLKDPK 255
S + I+ + PK
Sbjct: 257 SSESARNYIQSLTQMPK 273
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 54/296 (18%)
Query: 9 IGHGSFGSV--------NLAKA-SKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV L A K+S F S++ K + L + + IG
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 114
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 115 L----LDVFTPATSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 165
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 166 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 220
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI------------- 225
E +N Y DIW++GC + E+ +G+ + N ++R+
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMP 280
Query: 226 -----GVGDELPNIP----GDL----SEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ LP +P D+ + D L K + D +R TA L HP+
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPY 336
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 28/279 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP---SLMAVKSC-ADCPPSSVT-LKNEKEALDQIGI 60
G +G G+FG V LA+A + + P + +AVK +D ++ L +E E + IG
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQN--------------NGRLQ 106
I+ G + G + +++EYAS+G+L + ++ + +L
Sbjct: 93 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 148
Query: 107 ESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
D+ + +G+ ++ SK +H D+ +NVLV +++ KIADFGLA+ +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
+ R +M+PE++ + Y D+W+ G + E+ + G + +F LL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLL 264
D+ N +L +D C+ P +R T + L+
Sbjct: 269 HRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 303
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 84/194 (43%), Gaps = 30/194 (15%)
Query: 102 NGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCD 161
NG L VK + +LKGL HS+ +H D+K QN+L+ N E K+A+FGLA+
Sbjct: 95 NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF--- 151
Query: 162 GERSQSFECRGTPLYMSPESV--NENEYEAPCDIWALGCAVVEMA-SGKPAW-NHKQDSN 217
G + + L+ P V Y D+W+ GC E+A +G+P + + D
Sbjct: 152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
Query: 218 VFSLLIRIGVGDE-----------------------LPNIPGDLSEQGKDFLIKCFLKDP 254
+ + +G E L N+ L+ G+D L +P
Sbjct: 212 LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNP 271
Query: 255 KRRWTAEMLLNHPF 268
+R +AE L HP+
Sbjct: 272 VQRISAEEALQHPY 285
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 29/190 (15%)
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF- 168
V+ + +L+GL+++HS +H D+K N+LV +N E KI DFG+A+ Q F
Sbjct: 161 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 220
Query: 169 -ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI- 225
E T Y +PE ++ +EY D+W++GC EM + + + K + L++ +
Sbjct: 221 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL 280
Query: 226 ---------GVGDE--------LP---NIPGDLSEQGKD-----FLIKCFLKDPKRRWTA 260
VG E LP +P + G D L + +P R +A
Sbjct: 281 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISA 340
Query: 261 EMLLNHPFVC 270
L HPF+
Sbjct: 341 AAALRHPFLA 350
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 29/195 (14%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGER 164
L V+ + +L+GL+++HS +H D+K N+LV +N E KI DFG+A+
Sbjct: 155 LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE 214
Query: 165 SQSF--ECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSL 221
Q F E T Y +PE ++ +EY D+W++GC EM + + + K + L
Sbjct: 215 HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQL 274
Query: 222 LIRI----------GVGDE--------LP---NIPGDLSEQGKD-----FLIKCFLKDPK 255
++ + VG E LP +P + G D L + +P
Sbjct: 275 IMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPS 334
Query: 256 RRWTAEMLLNHPFVC 270
R +A L HPF+
Sbjct: 335 ARISAAAALRHPFLA 349
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 81
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 82 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 132
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATRW---YRAP 187
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 246
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAV 278
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 22/269 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEA-----LD 56
++ G ++G G FGSV A+ + F + AD SS + +EA D
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 57 QIGICPQIVRCFGDDYSFEKGERFY--NLLLEYASRGSL-----ADRVKKQNNGRLQESD 109
P + + G R ++L + G L A R+ +N L
Sbjct: 84 H----PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG-ENPFNLPLQT 138
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R+ + G+ ++ S+ F+H D+ +N ++ ++ +ADFGL++K Q
Sbjct: 139 LVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 170 CRGTPLYMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVG 228
+ +++ ES+ +N Y D+WA G + E M G+ + +++ +++ LI G
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG---G 255
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ L P + E+ D + +C+ DPK+R
Sbjct: 256 NRLKQ-PPECMEEVYDLMYQCWSADPKQR 283
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 29/257 (11%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 91
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 92 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 142
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 197
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 256
Query: 239 SEQGKDFLIKCFLKDPK 255
S + I+ + PK
Sbjct: 257 SSESARNYIQSLAQMPK 273
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 28/279 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP---SLMAVKSC-ADCPPSSVT-LKNEKEALDQIGI 60
G +G G+FG V LA+A + + P + +AVK +D ++ L +E E + IG
Sbjct: 18 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQN--------------NGRLQ 106
I+ G + G + +++EYAS+G+L + ++ + +L
Sbjct: 78 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 133
Query: 107 ESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
D+ + +G+ ++ SK +H D+ +NVLV +++ KIADFGLA+ +
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
+ R +M+PE++ + Y D+W+ G + E+ + G + +F LL
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 253
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLL 264
D+ N +L +D C+ P +R T + L+
Sbjct: 254 HRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 288
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 121/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 68
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY ++GSL D +K + L+ + + + G
Sbjct: 69 HEKLVQL----YAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEWTARQGAKFPIKWTAPE 182
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 238
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ K+P+ R T E L
Sbjct: 239 ESLHDLMCQCWRKEPEERPTFEYL 262
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 28/279 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP---SLMAVKSC-ADCPPSSVT-LKNEKEALDQIGI 60
G +G G+FG V LA+A + + P + +AVK +D ++ L +E E + IG
Sbjct: 25 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES------------ 108
I+ G + G + +++EYAS+G+L + ++ + L+ S
Sbjct: 85 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 140
Query: 109 --DVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
D+ + +G+ ++ SK +H D+ +NVLV +++ KIADFGLA+ +
Sbjct: 141 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
+ R +M+PE++ + Y D+W+ G + E+ + G + +F LL
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 260
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLL 264
D+ N +L +D C+ P +R T + L+
Sbjct: 261 HRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 295
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 28/279 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP---SLMAVKSC-ADCPPSSVT-LKNEKEALDQIGI 60
G +G G+FG V LA+A + + P + +AVK +D ++ L +E E + IG
Sbjct: 22 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES------------ 108
I+ G + G + +++EYAS+G+L + ++ + L+ S
Sbjct: 82 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 137
Query: 109 --DVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
D+ + +G+ ++ SK +H D+ +NVLV +++ KIADFGLA+ +
Sbjct: 138 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
+ R +M+PE++ + Y D+W+ G + E+ + G + +F LL
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 257
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLL 264
D+ N +L +D C+ P +R T + L+
Sbjct: 258 HRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 292
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 71
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+G L D +K + L+ + + G
Sbjct: 72 HEKLVQL----YAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 185
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 241
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYL 265
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 320
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 321 HEKLVQL----YAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 375
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 376 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 434
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 435 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 490
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ K+P+ R T E L
Sbjct: 491 ESLHDLMCQCWRKEPEERPTFEYL 514
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 105
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 106 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 156
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E R Y +P
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMXGXVATRW---YRAP 211
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 270
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAV 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP---SLMAVKSC-ADCPPSSVT-LKNEKEALDQIGI 60
G +G G+FG V LA+A + + P + +AVK +D ++ L +E E + IG
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES------------ 108
I+ G + G + +++EYAS+G+L + ++ + L+ S
Sbjct: 93 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 148
Query: 109 --DVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
D+ + +G+ ++ SK +H D+ +NVLV +++ KIADFGLA+ +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP---SLMAVKSC-ADCPPSSVT-LKNEKEALDQIGI 60
G +G G+FG V LA+A + + P + +AVK +D ++ L +E E + IG
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES------------ 108
I+ G + G + +++EYAS+G+L + ++ + L+ S
Sbjct: 93 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLS 148
Query: 109 --DVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
D+ + +G+ ++ SK +H D+ +NVLV +++ KIADFGLA+ +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 28/279 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP---SLMAVKSC-ADCPPSSVT-LKNEKEALDQIGI 60
G +G G+FG V LA+A + + P + +AVK +D ++ L +E E + IG
Sbjct: 26 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES------------ 108
I+ G + G + +++EYAS+G+L + ++ + L+ S
Sbjct: 86 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 141
Query: 109 --DVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
D+ + +G+ ++ SK +H D+ +NVLV +++ KIADFGLA+ +
Sbjct: 142 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
+ R +M+PE++ + Y D+W+ G + E+ + G + +F LL
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 261
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLL 264
D+ N +L +D C+ P +R T + L+
Sbjct: 262 HRMDKPSNCTNELYMMMRD----CWHAVPSQRPTFKQLV 296
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGTMSPEAFLQEAQVMKKLR- 237
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 238 HEKLVQL----YAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGLA+ D E + + + +PE
Sbjct: 293 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 351
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 407
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ K+P+ R T E L
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYL 431
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAV 282
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 121/261 (46%), Gaps = 27/261 (10%)
Query: 9 IGHGSFGSVNLAKASK-----VSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+G G FG V +A +K V + P M+V++ TL+++K
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDK----------- 71
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++ E Y ++ E+ ++GSL D +K + + ++ + +G+
Sbjct: 72 LVKL----HAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 126
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
I + ++H D++ N+LV + KIADFGLA+ D E + + + +PE++N
Sbjct: 127 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAIN 185
Query: 184 ENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ D+W+ G ++E+ + G+ + + V L R G +P P + E+
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER---GYRMPR-PENCPEEL 241
Query: 243 KDFLIKCFLKDPKRRWTAEML 263
+ +++C+ P+ R T E +
Sbjct: 242 YNIMMRCWKNRPEERPTFEYI 262
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 14/203 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEA--LDQIGICPQ 63
G+ IG G+FG V + ++ L+AVKSC + P + K +EA L Q P
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNT----LVAVKSCRETLPPDLKAKFLQEARILKQYS-HPN 173
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR G + + Y +++E G ++ + RL+ + + G+ +
Sbjct: 174 IVRLIG---VCTQKQPIY-IVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEY 228
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESV 182
+ SK +H D+ +N LV + + KI+DFG++++ + DG + S R P+ + +PE++
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA-DGVYAASGGLRQVPVKWTAPEAL 287
Query: 183 NENEYEAPCDIWALGCAVVEMAS 205
N Y + D+W+ G + E S
Sbjct: 288 NYGRYSSESDVWSFGILLWETFS 310
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 30/194 (15%)
Query: 102 NGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCD 161
NG L VK + +LKGL HS+ +H D+K QN+L+ N E K+ADFGLA+
Sbjct: 95 NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAF--- 151
Query: 162 GERSQSFECRGTPLYMSPESV--NENEYEAPCDIWALGCAVVEMA-SGKPAW-NHKQDSN 217
G + + L+ P V Y D+W+ GC E+A + +P + + D
Sbjct: 152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQ 211
Query: 218 VFSLLIRIGVGDE-----------------------LPNIPGDLSEQGKDFLIKCFLKDP 254
+ + +G E L N+ L+ G+D L +P
Sbjct: 212 LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNP 271
Query: 255 KRRWTAEMLLNHPF 268
+R +AE L HP+
Sbjct: 272 VQRISAEEALQHPY 285
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 23/217 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP---SLMAVKSC-ADCPPSSVT-LKNEKEALDQIGI 60
G +G G+FG V LA+A + + P + +AVK +D ++ L +E E + IG
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQES------------ 108
I+ G + G + +++EYAS+G+L + ++ + L+ S
Sbjct: 134 HKNIINLLGA--CTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 189
Query: 109 --DVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQ 166
D+ + +G+ ++ SK +H D+ +NVLV +++ KIADFGLA+ +
Sbjct: 190 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 167 SFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ R +M+PE++ + Y D+W+ G + E+
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 108
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 109 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 159
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E R Y +P
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMXGYVATRW---YRAP 214
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 273
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 305
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 14/203 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEA--LDQIGICPQ 63
G+ IG G+FG V + ++ L+AVKSC + P + K +EA L Q P
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNT----LVAVKSCRETLPPDLKAKFLQEARILKQYS-HPN 173
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
IVR G + + Y +++E G ++ + RL+ + + G+ +
Sbjct: 174 IVRLIG---VCTQKQPIY-IVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEY 228
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESV 182
+ SK +H D+ +N LV + + KI+DFG++++ + DG + S R P+ + +PE++
Sbjct: 229 LESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA-DGVXAASGGLRQVPVKWTAPEAL 287
Query: 183 NENEYEAPCDIWALGCAVVEMAS 205
N Y + D+W+ G + E S
Sbjct: 288 NYGRYSSESDVWSFGILLWETFS 310
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 18/264 (6%)
Query: 2 EWLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
E LR +V +G G FG V + + + +A+K+ S E + + ++
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTR-----VAIKTLKPGNMSPEAFLQEAQVMKKLR- 238
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++V+ Y+ E Y ++ EY S+GSL D +K + L+ + + G
Sbjct: 239 HEKLVQL----YAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 293
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+ ++ +VH D++ N+LV +N K+ADFGL + D E + + + +PE
Sbjct: 294 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPE 352
Query: 181 SVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + D+W+ G + E+ + G+ + + V + R G +P P +
Sbjct: 353 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER---GYRMP-CPPECP 408
Query: 240 EQGKDFLIKCFLKDPKRRWTAEML 263
E D + +C+ KDP+ R T E L
Sbjct: 409 ESLHDLMCQCWRKDPEERPTFEYL 432
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 121/261 (46%), Gaps = 27/261 (10%)
Query: 9 IGHGSFGSVNLAKASK-----VSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+G G FG V +A +K V + P M+V++ TL+++K
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDK----------- 244
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++ E Y ++ E+ ++GSL D +K + + ++ + +G+
Sbjct: 245 LVKL----HAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
I + ++H D++ N+LV + KIADFGLA+ D E + + + +PE++N
Sbjct: 300 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAIN 358
Query: 184 ENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ D+W+ G ++E+ + G+ + + V L R G +P P + E+
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER---GYRMPR-PENCPEEL 414
Query: 243 KDFLIKCFLKDPKRRWTAEML 263
+ +++C+ P+ R T E +
Sbjct: 415 YNIMMRCWKNRPEERPTFEYI 435
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI D+GLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 117/258 (45%), Gaps = 28/258 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----PQ 63
IG GSFG+V+ A+ LM A+ E L ++ I P
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAE---------RVNEFLREVAIMKRLRHPN 95
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS--MLKGL 121
IV G +++ EY SRGSL R+ ++ R Q + +R + + + KG+
Sbjct: 96 IVLFMGAVTQPPN----LSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 122 RHIHSKG--FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
++H++ VH ++K N+LV K+ DFGL++ + S+S GTP +M+P
Sbjct: 151 NYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS--AAGTPEWMAP 208
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + + D+++ G + E+A+ + W + + V + +G + IP +L+
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA---AVGFKCKRLEIPRNLN 265
Query: 240 EQGKDFLIKCFLKDPKRR 257
Q + C+ +P +R
Sbjct: 266 PQVAAIIEGCWTNEPWKR 283
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 124/270 (45%), Gaps = 15/270 (5%)
Query: 3 WLRGDV-IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
+L+ D+ IG GSF +V ++ + E + ++ K E E L +
Sbjct: 27 FLKFDIEIGRGSFKTVYKGLDTETTVEV-AWCELQDRKLTKSERQRFKEEAEXLKGLQ-H 84
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IVR + S KG++ L+ E + G+L +K+ +++ ++ + R +LKGL
Sbjct: 85 PNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV--LRSWCRQILKGL 142
Query: 122 RHIHSKG--FVHCDIKLQNVLVFD-NDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
+ +H++ +H D+K N+ + KI D GLA ++ GTP + +
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGTPEFXA 198
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
PE E +Y+ D++A G +E A+ + ++ Q N + R+ G + +
Sbjct: 199 PEXY-EEKYDESVDVYAFGXCXLEXATSEYPYSECQ--NAAQIYRRVTSGVKPASFDKVA 255
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ K+ + C ++ R++ + LLNH F
Sbjct: 256 IPEVKEIIEGCIRQNKDERYSIKDLLNHAF 285
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 52 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ EY GSL D ++++ + + R + G++
Sbjct: 107 NIIRLEG----VVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGLA+ D E + + P+ + SPE+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 276
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 33/260 (12%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV K+S F SL+ + LK+E + IG
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE----NVIG 83
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E Y L+ L + VK Q L + V+ +L+
Sbjct: 84 L----LDVFTPATSIEDFSEVY--LVTTLMGADLNNIVKCQA---LSDEHVQFLVYQLLR 134
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS G +H D+K NV V ++ E +I DFGLA+++ D E + R Y +P
Sbjct: 135 GLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA--DEEMTGYVATRW---YRAP 189
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIG--VGDELPNIPG 236
E +N Y DIW++GC + E+ GK + S+ L RI VG P +
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLQGKALF---PGSDYIDQLKRIMEVVGTPSPEVLA 246
Query: 237 DLSEQGKDFLIKCFLKDPKR 256
+S + I+ P++
Sbjct: 247 KISSEHARTYIQSLPPMPQK 266
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 122/288 (42%), Gaps = 29/288 (10%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+ +RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 33 ITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 60 ICPQ-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRY 113
+ Q IVRC G S + RF +LLE + G L R + L D+
Sbjct: 91 LNHQNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 114 TRSMLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE- 169
R + G +++ F+H DI +N L+ AKI DFG+A+ D R+ +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRK 202
Query: 170 --CRGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
C P+ +M PE+ E + + D W+ G + E+ S G + K + V +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
G D N PG + + +C+ P+ R ++L C D
Sbjct: 263 GRMDPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 81
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK +L + V+ +L+
Sbjct: 82 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVK---CAKLTDDHVQFLIYQILR 132
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ + D E + R Y +P
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRW---YRAP 187
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 246
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAV 278
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 52 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ EY GSL D ++++ + + R + G++
Sbjct: 107 NIIRLEG----VVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ GFVH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 162 YLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 276
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 92
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 93 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 143
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ ++ + T Y +P
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA-----DEMTGYVATRWYRAP 198
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 257
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 289
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 92
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 93 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 143
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ ++ + T Y +P
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA-----DEMTGYVATRWYRAP 198
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 257
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 289
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
++ + +L GL +H G VH D+ N+L+ DN++ I DF LA++ + D ++
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 170 CRGTPLYMSPESVNENE-YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVG 228
R Y +PE V + + + D+W+ GC + EM + K + N + ++ +
Sbjct: 196 HRW---YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTA 260
++ ++ S +D+L P R WTA
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTA 284
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 28/258 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----PQ 63
IG GSFG+V+ A+ LM A+ E L ++ I P
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAE---------RVNEFLREVAIMKRLRHPN 95
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS--MLKGL 121
IV G +++ EY SRGSL R+ ++ R Q + +R + + + KG+
Sbjct: 96 IVLFMGAVTQPPN----LSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 122 RHIHSKG--FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
++H++ VH D+K N+LV K+ DFGL++ + S+ GTP +M+P
Sbjct: 151 NYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX--AAGTPEWMAP 208
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
E + + D+++ G + E+A+ + W + + V + +G + IP +L+
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA---AVGFKCKRLEIPRNLN 265
Query: 240 EQGKDFLIKCFLKDPKRR 257
Q + C+ +P +R
Sbjct: 266 PQVAAIIEGCWTNEPWKR 283
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 122/288 (42%), Gaps = 29/288 (10%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+ +RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 47 ITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 60 ICPQ-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRY 113
+ Q IVRC G S + RF +LLE + G L R + L D+
Sbjct: 105 LNHQNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 160
Query: 114 TRSMLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE- 169
R + G +++ F+H DI +N L+ AKI DFG+A+ D R+ +
Sbjct: 161 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRK 216
Query: 170 --CRGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
C P+ +M PE+ E + + D W+ G + E+ S G + K + V +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 276
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
G D N PG + + +C+ P+ R ++L C D
Sbjct: 277 GRMDPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI------CP 62
+G G++G V K V S + AVK ++V + +K L + I CP
Sbjct: 42 LGRGAYGVVE--KXRHVPSG--QIXAVKRIR----ATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
V +G F +G+ + L S +V + + E + + S++K L
Sbjct: 94 FTVTFYG--ALFREGDVWICXELXDTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKALE 150
Query: 123 HIHSK-GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
H+HSK +H D+K NVL+ + K DFG++ D + C+ Y +PE
Sbjct: 151 HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP---YXAPER 207
Query: 182 VN----ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGD 237
+N + Y DIW+LG +E+A + + + F L ++ V + P +P D
Sbjct: 208 INPELNQKGYSVKSDIWSLGITXIELAILR--FPYDSWGTPFQQLKQV-VEEPSPQLPAD 264
Query: 238 -LSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
S + DF +C K+ K R T L HPF
Sbjct: 265 KFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
++ + +L GL +H G VH D+ N+L+ DN++ I DF LA++ + D ++
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 170 CRGTPLYMSPESVNENE-YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVG 228
R Y +PE V + + + D+W+ GC + EM + K + N + ++ +
Sbjct: 196 HRW---YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTA 260
++ ++ S +D+L P R WTA
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTA 284
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 92
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 93 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 143
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DFGLA+ ++ + T Y +P
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA-----DEMTGYVATRWYRAP 198
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 257
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 289
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 78 ERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQ 137
+RFY L+ E GS+ + K+ + E + + + L +H+KG H D+K +
Sbjct: 84 DRFY-LVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDLKPE 140
Query: 138 NVLVFDNDEA---KIADFGLAKKSSCDGERS-----QSFECRGTPLYMSPESVNE----- 184
N+L ++ KI DFGL +G+ S + G+ YM+PE V
Sbjct: 141 NILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEA 200
Query: 185 NEYEAPCDIWALGCAVVEMASGKP----------AWNHKQDSNVFSLLIRIGVGDELPNI 234
+ Y+ CD+W+LG + + SG P W+ + ++ + +
Sbjct: 201 SIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEF 260
Query: 235 P----GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV--CADDQT 275
P +S KD + K ++D K+R +A +L HP+V CA + T
Sbjct: 261 PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 73
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 74 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 189 IKSDVWSFGILLTEIVT 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 23 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 75
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 76 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 131
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 190
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 191 IKSDVWSFGILLTEIVT 207
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSS-EFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
+ + G+V+G G FG +A KV+ E +M +K + ++ L ++ +
Sbjct: 11 DLIHGEVLGKGCFG-----QAIKVTHRETGEVMVMKELI-----RFDEETQRTFLKEVKV 60
Query: 61 C-----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTR 115
P +++ G Y ++ N + EY G+L +K ++ V + +
Sbjct: 61 MRCLEHPNVLKFIGVLYK----DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS-FAK 115
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAK-----KSSCDGERS----- 165
+ G+ ++HS +H D+ N LV +N +ADFGLA+ K+ +G RS
Sbjct: 116 DIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 166 --QSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
+ + G P +M+PE +N Y+ D+++ G + E+
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 30 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 82
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 83 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 138
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 197
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 198 IKSDVWSFGILLTEIVT 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 120/285 (42%), Gaps = 29/285 (10%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 50 IRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNH 107
Query: 63 Q-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTRS 116
Q IVRC G S + RF +LLE + G L R + L D+ R
Sbjct: 108 QNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE---C 170
+ G +++ F+H DI +N L+ AKI DFG+A+ D R+ + C
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGC 219
Query: 171 RGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVG 228
P+ +M PE+ E + + D W+ G + E+ S G + K + V + G
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 279
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
D N PG + + +C+ P+ R ++L C D
Sbjct: 280 DPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 117/282 (41%), Gaps = 35/282 (12%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV-- 65
V+G G+FG V A+ + S + A+K T+ +E L + Q V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYY----AIKKIRHTEEKLSTILSEVMLLASLN--HQYVVR 66
Query: 66 --------RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM 117
R F + K + + +EY G+L D + +N + Q + R R +
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ-QRDEYWRLFRQI 125
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKK------------SSCDGERS 165
L+ L +IHS+G +H D+K N+ + ++ KI DFGLAK + G
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 166 QSFECRGTPLYMSPESVN-ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIR 224
GT +Y++ E ++ Y D+++LG EM P + N+ L
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKLRS 243
Query: 225 IGVGDELPNIPGDLSEQGKDFLIKCFL-KDPKRRWTAEMLLN 265
+ + E P D + + +I+ + DP +R A LLN
Sbjct: 244 VSI--EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 22 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 74
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 75 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 130
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 189
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 190 IKSDVWSFGILLTEIVT 206
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G FG V+L + ++AVK+ AD P + K+ +D I+R
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRS--GWKQEID-------ILRT 89
Query: 68 FGDDYSF-------EKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
++ + G L++EY GSL D + + + G Q + + + + +G
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQ---LLLFAQQICEG 146
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSP 179
+ ++H++ ++H D+ +NVL+ ++ KI DFGLAK E + E +P++ +P
Sbjct: 147 MAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAP 206
Query: 180 ESVNENEYEAPCDIWALGCAVVEMAS 205
E + E ++ D+W+ G + E+ +
Sbjct: 207 ECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 73
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 74 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 189 IKSDVWSFGILLTEIVT 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 73
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 74 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFT 188
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 189 IKSDVWSFGILLTEIVT 205
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 27 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 79
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 80 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 194
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 195 IKSDVWSFGILLTEIVT 211
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 29/288 (10%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+ +RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 33 ITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 60 ICPQ-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRY 113
Q IVRC G S + RF +LLE + G L R + L D+
Sbjct: 91 FNHQNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 114 TRSMLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE- 169
R + G +++ F+H DI +N L+ AKI DFG+A+ D R+ +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRK 202
Query: 170 --CRGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
C P+ +M PE+ E + + D W+ G + E+ S G + K + V +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
G D N PG + + +C+ P+ R ++L C D
Sbjct: 263 GRMDPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 40/192 (20%)
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
ML G++H+HS G +H D+K N++V + KI DFGLA+ +S + + R Y
Sbjct: 133 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTR---YY 189
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGKPA---------WNHKQD-----SNVFSLL 222
+PE + Y+ DIW++GC + E+ G WN + S F
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAA 249
Query: 223 IRIGVGDEL---PNIPGDLSE--------------------QGKDFLIKCFLKDPKRRWT 259
++ V + + P PG E Q +D L K + DP +R +
Sbjct: 250 LQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRIS 309
Query: 260 AEMLLNHPFVCA 271
+ L HP++
Sbjct: 310 VDEALRHPYITV 321
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 120/285 (42%), Gaps = 29/285 (10%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 42 IRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 99
Query: 63 Q-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTRS 116
Q IVRC G S + RF +LLE + G L R + L D+ R
Sbjct: 100 QNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 155
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE---C 170
+ G +++ F+H DI +N L+ AKI DFG+A+ D R+ + C
Sbjct: 156 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGC 211
Query: 171 RGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVG 228
P+ +M PE+ E + + D W+ G + E+ S G + K + V + G
Sbjct: 212 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 271
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
D N PG + + +C+ P+ R ++L C D
Sbjct: 272 DPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 312
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 115/268 (42%), Gaps = 12/268 (4%)
Query: 2 EWLRGDVIGHGSFGSVN-LAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI 60
++L GD++G GS+G V + + + ++ K P +K E + L ++
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR- 64
Query: 61 CPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
+++ Y+ EK + + +++EY G + + + R Y ++ G
Sbjct: 65 HKNVIQLVDVLYNEEKQKMY--MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L ++HS+G VH DIK N+L+ KI+ G+A+ +G+P + PE
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 181 SVNENEYEA--PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
N + + DIW+ G + + +G + + N++ L IG G IPGD
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPF---EGDNIYKLFENIGKGSY--AIPGDC 236
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
D L +P +R++ + H
Sbjct: 237 GPPLSDLLKGMLEYEPAKRFSIRQIRQH 264
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 29 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 81
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 82 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 137
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEXTAREGAKFPIKWTAPEAINYGTFT 196
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 197 IKSDVWSFGILLTEIVT 213
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 47/272 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 33 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 68
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLAD--------------RVKKQNNGRLQESD 109
+ F ++ + R N+LL Y+++ LA + + ++ D
Sbjct: 69 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 128
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R T +G+ ++H+K +H D+K N+ + ++ KI DFGLA + S Q +
Sbjct: 129 IARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 185
Query: 170 CRGTPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRI 225
G+ L+M+PE + ++N Y D++A G + E+ +G+ P N + ++ R
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 245
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ +L + + + K + +C K R
Sbjct: 246 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 277
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 27 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 79
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 80 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 135
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFT 194
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 195 IKSDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 26 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 78
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 79 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 134
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFT 193
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 194 IKSDVWSFGILLTEIVT 210
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 29/288 (10%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+ +RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 24 ITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 60 ICPQ-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRY 113
Q IVRC G S + RF +LLE + G L R + L D+
Sbjct: 82 FNHQNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 137
Query: 114 TRSMLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE- 169
R + G +++ F+H DI +N L+ AKI DFG+A+ D R+ +
Sbjct: 138 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRK 193
Query: 170 --CRGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
C P+ +M PE+ E + + D W+ G + E+ S G + K + V +
Sbjct: 194 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 253
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
G D N PG + + +C+ P+ R ++L C D
Sbjct: 254 GRMDPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 297
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 120/285 (42%), Gaps = 29/285 (10%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 62 IRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 119
Query: 63 Q-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTRS 116
Q IVRC G S + RF +LLE + G L R + L D+ R
Sbjct: 120 QNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 175
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE---C 170
+ G +++ F+H DI +N L+ AKI DFG+A+ D R+ + C
Sbjct: 176 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGC 231
Query: 171 RGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVG 228
P+ +M PE+ E + + D W+ G + E+ S G + K + V + G
Sbjct: 232 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 291
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
D N PG + + +C+ P+ R ++L C D
Sbjct: 292 DPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 332
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 120/285 (42%), Gaps = 29/285 (10%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 52 IRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 109
Query: 63 Q-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTRS 116
Q IVRC G S + RF +LLE + G L R + L D+ R
Sbjct: 110 QNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 165
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE---C 170
+ G +++ F+H DI +N L+ AKI DFG+A+ D R+ + C
Sbjct: 166 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGC 221
Query: 171 RGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVG 228
P+ +M PE+ E + + D W+ G + E+ S G + K + V + G
Sbjct: 222 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 281
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
D N PG + + +C+ P+ R ++L C D
Sbjct: 282 DPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 322
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 31 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 83
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 84 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 139
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFT 198
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 199 IKSDVWSFGILLTEIVT 215
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 120/285 (42%), Gaps = 29/285 (10%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 35 IRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 92
Query: 63 Q-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTRS 116
Q IVRC G S + RF +LLE + G L R + L D+ R
Sbjct: 93 QNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE---C 170
+ G +++ F+H DI +N L+ AKI DFG+A+ D R+ + C
Sbjct: 149 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGC 204
Query: 171 RGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVG 228
P+ +M PE+ E + + D W+ G + E+ S G + K + V + G
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 264
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
D N PG + + +C+ P+ R ++L C D
Sbjct: 265 DPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 47/272 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 41 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 76
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLAD--------------RVKKQNNGRLQESD 109
+ F ++ + R N+LL Y+++ LA + + ++ D
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 136
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R T +G+ ++H+K +H D+K N+ + ++ KI DFGLA + S Q +
Sbjct: 137 IARQT---AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 193
Query: 170 CRGTPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRI 225
G+ L+M+PE + ++N Y D++A G + E+ +G+ P N + ++ R
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 253
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ +L + + + K + +C K R
Sbjct: 254 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 285
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 29/288 (10%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+ +RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 33 ITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 60 ICPQ-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRY 113
Q IVRC G S + RF +LLE + G L R + L D+
Sbjct: 91 FNHQNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 146
Query: 114 TRSMLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE- 169
R + G +++ F+H DI +N L+ AKI DFG+A+ D R+ +
Sbjct: 147 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ----DIYRASYYRK 202
Query: 170 --CRGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
C P+ +M PE+ E + + D W+ G + E+ S G + K + V +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG 262
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
G D N PG + + +C+ P+ R ++L C D
Sbjct: 263 GRMDPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 23/285 (8%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+ +RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 50 ITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 60 ICPQ-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRY 113
Q IVRC G S + RF +LLE + G L R + L D+
Sbjct: 108 FNHQNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 163
Query: 114 TRSMLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFEC 170
R + G +++ F+H DI +N L+ AKI DFG+A+ G + C
Sbjct: 164 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG-GC 222
Query: 171 RGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVG 228
P+ +M PE+ E + + D W+ G + E+ S G + K + V + G
Sbjct: 223 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 282
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
D N PG + + +C+ P+ R ++L C D
Sbjct: 283 DPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 323
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 47/272 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 13 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 48
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLAD--------------RVKKQNNGRLQESD 109
+ F ++ + R N+LL Y+++ LA + + ++ D
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 108
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R T +G+ ++H+K +H D+K N+ + ++ KI DFGLA + S Q +
Sbjct: 109 IARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 165
Query: 170 CRGTPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRI 225
G+ L+M+PE + ++N Y D++A G + E+ +G+ P N + ++ R
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 225
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ +L + + + K + +C K R
Sbjct: 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 23 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ EY GSL D ++++ + + R + G++
Sbjct: 78 NIIRLEG----VVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 133 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 247
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 248 AALYQLMLDCWQKDRNNRPKFEQIVS 273
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 118/282 (41%), Gaps = 23/282 (8%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 76 IRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 133
Query: 63 Q-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTRS 116
Q IVRC G S + RF +LLE + G L R + L D+ R
Sbjct: 134 QNIVRCIG--VSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 189
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFECRGT 173
+ G +++ F+H DI +N L+ AKI DFG+A+ G + C
Sbjct: 190 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKG-GCAML 248
Query: 174 PL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDEL 231
P+ +M PE+ E + + D W+ G + E+ S G + K + V + G D
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP 308
Query: 232 PNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
N PG + + +C+ P+ R ++L C D
Sbjct: 309 KNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 346
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 16 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 68
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 69 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 124
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFT 183
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 184 IKSDVWSFGILLTEIVT 200
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 40 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ EY GSL D ++++ + + R + G++
Sbjct: 95 NIIRLEG----VVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 149
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 150 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 209
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 210 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 264
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 265 AALYQLMLDCWQKDRNNRPKFEQIVS 290
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 52 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ EY GSL D ++++ + + R + G++
Sbjct: 107 NIIRLEG----VVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 276
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 50 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ EY GSL D ++++ + + R + G++
Sbjct: 105 NIIRLEG----VVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 159
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 160 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 219
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 274
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 275 AALYQLMLDCWQKDRNNRPKFEQIVS 300
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 52 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ EY GSL D ++++ + + R + G++
Sbjct: 107 NIIRLEG----VVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 276
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 8 VIGHGSFGSVNLA--KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
IG G FG V L + +KV+ + A S +T + +G+ +
Sbjct: 28 TIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE-- 85
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
EKG + ++ EY ++GSL D ++ + L + +++ + + + ++
Sbjct: 86 ---------EKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNE 184
FVH D+ +NVLV +++ AK++DFGL K++S + + P+ + +PE++ E
Sbjct: 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK------LPVKWTAPEALRE 188
Query: 185 NEYEAPCDIWALGCAVVEMAS 205
++ D+W+ G + E+ S
Sbjct: 189 KKFSTKSDVWSFGILLWEIYS 209
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 52 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ EY GSL D ++++ + + R + G++
Sbjct: 107 NIIRLEG----VVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 276
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 52 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ EY GSL D ++++ + + R + G++
Sbjct: 107 NIIRLEG----VVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 276
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI FGLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 14/249 (5%)
Query: 8 VIGHGSFGSV--NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
V+G G+FG+V + + + P + V P ++ + +E + +G P +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG-SPYVS 82
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
R G + L+ Y G L D V+ +N GRL D+ + + KG+ ++
Sbjct: 83 RLLG--ICLTSTVQLVTQLMPY---GCLLDHVR-ENRGRLGSQDLLNWCMQIAKGMSYLE 136
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNEN 185
VH D+ +NVLV + KI DFGLA+ D + + +M+ ES+
Sbjct: 137 DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 186 EYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKD 244
+ D+W+ G V E M G ++ + LL + G+ LP P +
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK---GERLPQ-PPICTIDVYM 252
Query: 245 FLIKCFLKD 253
++KC++ D
Sbjct: 253 IMVKCWMID 261
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 24/257 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCA-DCPPSSVTLKNEKEALDQIGIC----- 61
++G G FG V + E ++ AVK+C DC TL N+++ + + I
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINV-AVKTCKKDC-----TLDNKEKFMSEAVIMKNLDH 68
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV+ G E+ + +++E G L +++ N L+ + Y+ + K +
Sbjct: 69 PHIVKLIG---IIEEEPTW--IIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAM 122
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
++ S VH DI ++N+LV + K+ DFGL++ D + ++ R +MSPES
Sbjct: 123 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPES 181
Query: 182 VNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
+N + D+W + E+ S GK + ++ +V +L + GD LP P
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRLPK-PDLCPP 237
Query: 241 QGKDFLIKCFLKDPKRR 257
+ +C+ DP R
Sbjct: 238 VLYTLMTRCWDYDPSDR 254
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 9 IGHGSFGSVNLA--KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR 66
IG G FG V L + +KV+ + A S +T + +G+ +
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE--- 70
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
EKG + ++ EY ++GSL D ++ + L + +++ + + + ++
Sbjct: 71 --------EKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNEN 185
FVH D+ +NVLV +++ AK++DFGL K++S + + P+ + +PE++ E
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK------LPVKWTAPEALREK 174
Query: 186 EYEAPCDIWALGCAVVEMAS 205
++ D+W+ G + E+ S
Sbjct: 175 KFSTKSDVWSFGILLWEIYS 194
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 29/285 (10%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 50 IRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 107
Query: 63 Q-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTRS 116
Q IVRC G S + RF +L+E + G L R + L D+ R
Sbjct: 108 QNIVRCIG--VSLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 163
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE---C 170
+ G +++ F+H DI +N L+ AKI DFG+A+ D R+ + C
Sbjct: 164 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGC 219
Query: 171 RGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVG 228
P+ +M PE+ E + + D W+ G + E+ S G + K + V + G
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 279
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
D N PG + + +C+ P+ R ++L C D
Sbjct: 280 DPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 52 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ EY GSL D ++++ + + R + G++
Sbjct: 107 NIIRLEG----VVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGL + D E + + P+ + SPE+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 276
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 24/257 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCA-DCPPSSVTLKNEKEALDQIGIC----- 61
++G G FG V + E ++ AVK+C DC TL N+++ + + I
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINV-AVKTCKKDC-----TLDNKEKFMSEAVIMKNLDH 84
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV+ G E+ + +++E G L +++ N L+ + Y+ + K +
Sbjct: 85 PHIVKLIG---IIEEEPTW--IIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAM 138
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
++ S VH DI ++N+LV + K+ DFGL++ D + ++ R +MSPES
Sbjct: 139 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPES 197
Query: 182 VNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
+N + D+W + E+ S GK + ++ +V +L + GD LP P
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRLPK-PDLCPP 253
Query: 241 QGKDFLIKCFLKDPKRR 257
+ +C+ DP R
Sbjct: 254 VLYTLMTRCWDYDPSDR 270
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 9 IGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-----CP 62
+G GSFG V A + E + +AVK+ + S +L+ E L++ + C
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 80
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK------KQNNGR----LQESDVKR 112
+VR G KG+ +++E + G L ++ + N GR LQE + +
Sbjct: 81 HVVRLLG---VVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE--MIQ 134
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ G+ ++++K FVH D+ +N +V + KI DFG+ + D + + G
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGG 190
Query: 173 TPL----YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
L +M+PES+ + + D+W+ G + E+ S + + + V ++ G
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLN 265
D+ N P E+ D + C+ +PK R T ++N
Sbjct: 251 LDQPDNCP----ERVTDLMRMCWQFNPKMRPTFLEIVN 284
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 29/285 (10%)
Query: 4 LRGDVIGHGSFGSVNLAKASKVSSE-FPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
+RG +GHG+FG V + S + ++ P +AVK+ + L EAL
Sbjct: 35 IRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 92
Query: 63 Q-IVRCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTRS 116
Q IVRC G S + RF +L+E + G L R + L D+ R
Sbjct: 93 QNIVRCIG--VSLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARD 148
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVF---DNDEAKIADFGLAKKSSCDGERSQSFE---C 170
+ G +++ F+H DI +N L+ AKI DFG+A+ D R+ + C
Sbjct: 149 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGC 204
Query: 171 RGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVG 228
P+ +M PE+ E + + D W+ G + E+ S G + K + V + G
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 264
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
D N PG + + +C+ P+ R ++L C D
Sbjct: 265 DPPKNCPGPVYR----IMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 9 IGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-----CP 62
+G GSFG V A + E + +AVK+ + S +L+ E L++ + C
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 80
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK------KQNNGR----LQESDVKR 112
+VR G KG+ +++E + G L ++ + N GR LQE + +
Sbjct: 81 HVVRLLG---VVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE--MIQ 134
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ G+ ++++K FVH D+ +N +V + KI DFG+ + D + + G
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAYYRKGG 190
Query: 173 TPL----YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
L +M+PES+ + + D+W+ G + E+ S + + + V ++ G
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLN 265
D+ N P E+ D + C+ +PK R T ++N
Sbjct: 251 LDQPDNCP----ERVTDLMRMCWQFNPKMRPTFLEIVN 284
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 24/257 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCA-DCPPSSVTLKNEKEALDQIGIC----- 61
++G G FG V + E ++ AVK+C DC TL N+++ + + I
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINV-AVKTCKKDC-----TLDNKEKFMSEAVIMKNLDH 72
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P IV+ G E+ + +++E G L +++ N L+ + Y+ + K +
Sbjct: 73 PHIVKLIG---IIEEEPTW--IIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAM 126
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
++ S VH DI ++N+LV + K+ DFGL++ D + ++ R +MSPES
Sbjct: 127 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPES 185
Query: 182 VNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
+N + D+W + E+ S GK + ++ +V +L + GD LP P
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK---GDRLPK-PDLCPP 241
Query: 241 QGKDFLIKCFLKDPKRR 257
+ +C+ DP R
Sbjct: 242 VLYTLMTRCWDYDPSDR 258
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 47/272 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 40 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 75
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLAD--------------RVKKQNNGRLQESD 109
+ F ++ + R N+LL Y+++ LA + + ++ D
Sbjct: 76 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 135
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R T +G+ ++H+K +H D+K N+ + ++ KI DFGLA S Q +
Sbjct: 136 IARQT---AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 192
Query: 170 CRGTPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRI 225
G+ L+M+PE + ++N Y D++A G + E+ +G+ P N + ++ R
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 252
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ +L + + + K + +C K R
Sbjct: 253 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 284
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 8 VIGHGSFGSVNLA--KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
IG G FG V L + +KV+ + A S +T + +G+ +
Sbjct: 200 TIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE-- 257
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
EKG + ++ EY ++GSL D ++ + L + +++ + + + ++
Sbjct: 258 ---------EKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNE 184
FVH D+ +NVLV +++ AK++DFGL K++S + + P+ + +PE++ E
Sbjct: 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK------LPVKWTAPEALRE 360
Query: 185 NEYEAPCDIWALGCAVVEMAS 205
++ D+W+ G + E+ S
Sbjct: 361 KKFSTKSDVWSFGILLWEIYS 381
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 47/272 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 41 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 76
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLAD--------------RVKKQNNGRLQESD 109
+ F ++ + R N+LL Y+++ LA + + ++ D
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 136
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R T +G+ ++H+K +H D+K N+ + ++ KI DFGLA S Q +
Sbjct: 137 IARQT---AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 193
Query: 170 CRGTPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRI 225
G+ L+M+PE + ++N Y D++A G + E+ +G+ P N + ++ R
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 253
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ +L + + + K + +C K R
Sbjct: 254 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 285
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 47/272 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 18 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 53
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLAD--------------RVKKQNNGRLQESD 109
+ F ++ + R N+LL Y+++ LA + + ++ D
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 113
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R T +G+ ++H+K +H D+K N+ + ++ KI DFGLA S Q +
Sbjct: 114 IARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 170 CRGTPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRI 225
G+ L+M+PE + ++N Y D++A G + E+ +G+ P N + ++ R
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 230
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ +L + + + K + +C K R
Sbjct: 231 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 262
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 47/272 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 15 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 50
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLAD--------------RVKKQNNGRLQESD 109
+ F ++ + R N+LL Y+++ LA + + ++ D
Sbjct: 51 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 110
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R T +G+ ++H+K +H D+K N+ + ++ KI DFGLA S Q +
Sbjct: 111 IARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 167
Query: 170 CRGTPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRI 225
G+ L+M+PE + ++N Y D++A G + E+ +G+ P N + ++ R
Sbjct: 168 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 227
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ +L + + + K + +C K R
Sbjct: 228 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 259
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 47/272 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 18 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 53
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLAD--------------RVKKQNNGRLQESD 109
+ F ++ + R N+LL Y+++ LA + + ++ D
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 113
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R T +G+ ++H+K +H D+K N+ + ++ KI DFGLA S Q +
Sbjct: 114 IARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 170 CRGTPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRI 225
G+ L+M+PE + ++N Y D++A G + E+ +G+ P N + ++ R
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 230
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ +L + + + K + +C K R
Sbjct: 231 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 262
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 47/272 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 13 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 48
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLAD--------------RVKKQNNGRLQESD 109
+ F ++ + R N+LL Y+++ LA + + ++ D
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 108
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R T +G+ ++H+K +H D+K N+ + ++ KI DFGLA S Q +
Sbjct: 109 IARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 170 CRGTPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRI 225
G+ L+M+PE + ++N Y D++A G + E+ +G+ P N + ++ R
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 225
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ +L + + + K + +C K R
Sbjct: 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI D GLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 9 IGHGSFGSVNLAKASK-----VSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQ 63
+G G FG V +A +K V + P M+V++ TL+++K
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDK----------- 238
Query: 64 IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRH 123
+V+ ++ E Y ++ E+ ++GSL D +K + + ++ + +G+
Sbjct: 239 LVKL----HAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 293
Query: 124 IHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVN 183
I + ++H D++ N+LV + KIADFGLA+ + F + T +PE++N
Sbjct: 294 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVGA-------KFPIKWT----APEAIN 342
Query: 184 ENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQG 242
+ D+W+ G ++E+ + G+ + + V L R G +P P + E+
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER---GYRMPR-PENCPEEL 398
Query: 243 KDFLIKCFLKDPKRRWTAEML 263
+ +++C+ P+ R T E +
Sbjct: 399 YNIMMRCWKNRPEERPTFEYI 419
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 9 IGHGSFGSV---------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV + K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI DF LA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPK 255
S + I+ + PK
Sbjct: 251 SSESARNYIQSLTQMPK 267
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 9 IGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-----CP 62
+G GSFG V A + E + +AVK+ + S +L+ E L++ + C
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 77
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK------KQNNGR----LQESDVKR 112
+VR G KG+ +++E + G L ++ + N GR LQE + +
Sbjct: 78 HVVRLLG---VVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE--MIQ 131
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ G+ ++++K FVH D+ +N +V + KI DFG+ + + +
Sbjct: 132 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 191
Query: 173 TPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDEL 231
+M+PES+ + + D+W+ G + E+ S + + + V ++ G D+
Sbjct: 192 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 251
Query: 232 PNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLN 265
N P E+ D + C+ +PK R T ++N
Sbjct: 252 DNCP----ERVTDLMRMCWQFNPKMRPTFLEIVN 281
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 9 IGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-----CP 62
+G GSFG V A + E + +AVK+ + S +L+ E L++ + C
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 80
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK------KQNNGR----LQESDVKR 112
+VR G KG+ +++E + G L ++ + N GR LQE + +
Sbjct: 81 HVVRLLG---VVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE--MIQ 134
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ G+ ++++K FVH D+ +N +V + KI DFG+ + + +
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 194
Query: 173 TPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDEL 231
+M+PES+ + + D+W+ G + E+ S + + + V ++ G D+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Query: 232 PNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLN 265
N P E+ D + C+ +PK R T ++N
Sbjct: 255 DNCP----ERVTDLMRMCWQFNPKMRPTFLEIVN 284
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 9/200 (4%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCAD-CPPSSVT-LKNEKEALDQIGICPQIVR 66
+G G FG V+L + ++AVK+ + C P + + E E L + IV+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-YHEHIVK 74
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
G ++GE+ L++EY GSL D + + G Q + + + + +G+ ++H+
Sbjct: 75 YKGC--CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ---LLLFAQQICEGMAYLHA 129
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNEN 185
+ ++H + +NVL+ ++ KI DFGLAK E + E +P++ +PE + E
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 186 EYEAPCDIWALGCAVVEMAS 205
++ D+W+ G + E+ +
Sbjct: 190 KFYYASDVWSFGVTLYELLT 209
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 40/193 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA +++C + T
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTACTNFMMTPYVV--TRY 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASG---------KPAWNHKQD-----SNVFSL 221
Y +PE + Y A DIW++GC + E+ G WN + S F
Sbjct: 191 YRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMA 250
Query: 222 LIRIGVGDEL---PNIPGDLSE--------------------QGKDFLIKCFLKDPKRRW 258
++ V + + P PG E Q +D L K + DP +R
Sbjct: 251 ALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRI 310
Query: 259 TAEMLLNHPFVCA 271
+ + L HP++
Sbjct: 311 SVDEALRHPYITV 323
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI D GLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 23/258 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
+IG G G V + +V + +A+K+ + T + ++ L + I P
Sbjct: 56 IIGSGDSGEVCYGRL-RVPGQRDVPVAIKALK----AGYTERQRRDFLSEASIMGQFDHP 110
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G +G R ++ EY GSL D + ++G+ + R + G+R
Sbjct: 111 NIIRLEG---VVTRG-RLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +NVLV N K++DFGL++ D + + + P+ + +PE+
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 182 VNENEYEAPCDIWALGCAVVE-MASG-KPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + + D+W+ G + E +A G +P WN + S + G LP P
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS----VEEGYRLPA-PMGCP 280
Query: 240 EQGKDFLIKCFLKDPKRR 257
++ C+ KD +R
Sbjct: 281 HALHQLMLDCWHKDRAQR 298
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 9/200 (4%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCAD-CPPSSVT-LKNEKEALDQIGICPQIVR 66
+G G FG V+L + ++AVK+ + C P + + E E L + IV+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTL-YHEHIVK 75
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
G ++GE+ L++EY GSL D + + G Q + + + + +G+ ++H+
Sbjct: 76 YKGC--CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ---LLLFAQQICEGMAYLHA 130
Query: 127 KGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY-MSPESVNEN 185
+ ++H + +NVL+ ++ KI DFGLAK E + E +P++ +PE + E
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 186 EYEAPCDIWALGCAVVEMAS 205
++ D+W+ G + E+ +
Sbjct: 191 KFYYASDVWSFGVTLYELLT 210
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 23/258 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
+IG G G V + +V + +A+K+ + T + ++ L + I P
Sbjct: 56 IIGSGDSGEVCYGRL-RVPGQRDVPVAIKALK----AGYTERQRRDFLSEASIMGQFDHP 110
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G +G R ++ EY GSL D + ++G+ + R + G+R
Sbjct: 111 NIIRLEG---VVTRG-RLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +NVLV N K++DFGL++ D + + + P+ + +PE+
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 182 VNENEYEAPCDIWALGCAVVE-MASG-KPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ + + D+W+ G + E +A G +P WN + S + G LP P
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS----VEEGYRLPA-PMGCP 280
Query: 240 EQGKDFLIKCFLKDPKRR 257
++ C+ KD +R
Sbjct: 281 HALHQLMLDCWHKDRAQR 298
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 9 IGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-----CP 62
+G GSFG V A + E + +AVK+ + S +L+ E L++ + C
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 79
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK------KQNNGR----LQESDVKR 112
+VR G KG+ +++E + G L ++ + N GR LQE + +
Sbjct: 80 HVVRLLG---VVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE--MIQ 133
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ G+ ++++K FVH D+ +N +V + KI DFG+ + D + + G
Sbjct: 134 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGG 189
Query: 173 TPL----YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
L +M+PES+ + + D+W+ G + E+ S + + + V ++ G
Sbjct: 190 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 249
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLN 265
D+ N P E+ D + C+ +PK R T ++N
Sbjct: 250 LDQPDNCP----ERVTDLMRMCWQFNPKMRPTFLEIVN 283
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 43/256 (16%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEK----EALDQIGICPQ 63
VIG GSFG V A KV +A+K ++NEK +A ++I I
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQH----VALK----------MVRNEKRFHRQAAEEIRILEH 149
Query: 64 IVRCFGDD----YSFEKGERFYN---LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
+ + D+ + F N + E S +L + +KK V+++ S
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTP 174
+L+ L +H +HCD+K +N+L+ + K+ DFG SSC E + + +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG----SSCY-EHQRVYTXIQSR 263
Query: 175 LYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
Y +PE + Y P D+W+LGC + E+ +G P + + + + +I EL +
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI------ELLGM 317
Query: 235 PG----DLSEQGKDFL 246
P D S++ K+F+
Sbjct: 318 PSQKLLDASKRAKNFV 333
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 43/256 (16%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEK----EALDQIGICPQ 63
VIG GSFG V A KV +A+K ++NEK +A ++I I
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQH----VALK----------MVRNEKRFHRQAAEEIRILEH 149
Query: 64 IVRCFGDD----YSFEKGERFYN---LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
+ + D+ + F N + E S +L + +KK V+++ S
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCDGERSQSFECRGTP 174
+L+ L +H +HCD+K +N+L+ + K+ DFG SSC E + + +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG----SSCY-EHQRVYTXIQSR 263
Query: 175 LYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
Y +PE + Y P D+W+LGC + E+ +G P + + + + +I EL +
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI------ELLGM 317
Query: 235 PG----DLSEQGKDFL 246
P D S++ K+F+
Sbjct: 318 PSQKLLDASKRAKNFV 333
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 29/272 (10%)
Query: 9 IGHGSFGSVNLA---------KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
+G G++GSV A K+S F S++ K + L + + IG
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHMKHENVIG 85
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
+ + F S E+ Y L+ + L + VK Q +L + V+ +L+
Sbjct: 86 L----LDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 136
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
GL++IHS +H D+K N+ V ++ E KI D GLA+ + D E + R Y +P
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHT--DDEMTGYVATRW---YRAP 191
Query: 180 E-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E +N Y DIW++GC + E+ +G+ + + L++R+ VG + +
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKI 250
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVC 270
S + I+ + PK + + +P
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 29/265 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 82
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L R + +NN L + + + +
Sbjct: 83 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 138
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
G+ ++++ FVH D+ +N +V ++ KI DFG+ + D + + G L
Sbjct: 139 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 194
Query: 176 --YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELP 232
+MSPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+
Sbjct: 195 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 254
Query: 233 NIPGDLSEQGKDFLIKCFLKDPKRR 257
N P L E + C+ +PK R
Sbjct: 255 NCPDMLFE----LMRMCWQYNPKMR 275
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 29/265 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 78
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L R + +NN L + + + +
Sbjct: 79 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
G+ ++++ FVH D+ +N +V ++ KI DFG+ + D + + G L
Sbjct: 135 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 190
Query: 176 --YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELP 232
+MSPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 250
Query: 233 NIPGDLSEQGKDFLIKCFLKDPKRR 257
N P L E + C+ +PK R
Sbjct: 251 NCPDMLFE----LMRMCWQYNPKMR 271
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 29/265 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 85
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L R + +NN L + + + +
Sbjct: 86 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
G+ ++++ FVH D+ +N +V ++ KI DFG+ + D + + G L
Sbjct: 142 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 197
Query: 176 --YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELP 232
+MSPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 257
Query: 233 NIPGDLSEQGKDFLIKCFLKDPKRR 257
N P L E + C+ +PK R
Sbjct: 258 NCPDMLFE----LMRMCWQYNPKMR 278
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 22/201 (10%)
Query: 8 VIGHGSFGSVNLA--KASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
IG G FG V L + +KV+ + A S +T + +G+ +
Sbjct: 19 TIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE-- 76
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
EKG + ++ EY ++GSL D ++ + L + +++ + + + ++
Sbjct: 77 ---------EKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 126 SKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNE 184
FVH D+ +NVLV +++ AK++DFGL K++S + + P+ + +PE++ E
Sbjct: 126 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK------LPVKWTAPEALRE 179
Query: 185 NEYEAPCDIWALGCAVVEMAS 205
+ D+W+ G + E+ S
Sbjct: 180 AAFSTKSDVWSFGILLWEIYS 200
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 29/265 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 84
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L R + +NN L + + + +
Sbjct: 85 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
G+ ++++ FVH D+ +N +V ++ KI DFG+ + D + + G L
Sbjct: 141 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 196
Query: 176 --YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELP 232
+MSPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 256
Query: 233 NIPGDLSEQGKDFLIKCFLKDPKRR 257
N P L E + C+ +PK R
Sbjct: 257 NCPDMLFE----LMRMCWQYNPKMR 277
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---Y 183
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 304 SVDDALQHPYI 314
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---Y 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 311 SVDDALQHPYI 321
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 106 QESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDND--EAKIADFGLAKK--SSCD 161
+E + R + L ++H++G H DIK +N L N E K+ DFGL+K+ +
Sbjct: 166 REKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN 225
Query: 162 GERSQSFECRGTPLYMSPESVN-ENEYEAP-CDIWALGCAVVEMASGKPAWNHKQDSNVF 219
GE GTP +++PE +N NE P CD W+ G + + G + D++
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI 285
Query: 220 SLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S ++ + E PN LS +D L ++ R+ A L HP++
Sbjct: 286 SQVLNKKLCFENPNY-NVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI 334
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 29/265 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 91
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L R + +NN L + + + +
Sbjct: 92 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 147
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
G+ ++++ FVH D+ +N +V ++ KI DFG+ + D + + G L
Sbjct: 148 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 203
Query: 176 --YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELP 232
+MSPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 263
Query: 233 NIPGDLSEQGKDFLIKCFLKDPKRR 257
N P L E + C+ +PK R
Sbjct: 264 NCPDMLFE----LMRMCWQYNPKMR 284
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---Y 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 311 SVDDALQHPYI 321
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 29/265 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 84
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L R + +NN L + + + +
Sbjct: 85 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
G+ ++++ FVH D+ +N +V ++ KI DFG+ + D + + G L
Sbjct: 141 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 196
Query: 176 --YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELP 232
+MSPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 256
Query: 233 NIPGDLSEQGKDFLIKCFLKDPKRR 257
N P L E + C+ +PK R
Sbjct: 257 NCPDMLFE----LMRMCWQYNPKMR 277
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 17/256 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G+G FG V + + + +A+K+ S + E + + ++ ++V+
Sbjct: 17 LGNGQFGEVWMGTWNGNTK-----VAIKTLKPGTMSPESFLEEAQIMKKLK-HDKLVQL- 69
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY ++GSL D +K L+ ++ + G+ +I
Sbjct: 70 ---YAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 125
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H D++ N+LV + KIADFGLA+ D E + + + +PE+ +
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 189 APCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
D+W+ G + E+ + G+ + + V + R G +P P D + +I
Sbjct: 185 IKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER---GYRMP-CPQDCPISLHELMI 240
Query: 248 KCFLKDPKRRWTAEML 263
C+ KDP+ R T E L
Sbjct: 241 HCWKKDPEERPTFEYL 256
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 40/190 (21%)
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R Y
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YY 191
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL---------- 222
+PE + Y+ DIW++GC + EM G P +H Q + V L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 223 ----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRWT 259
+R V + P++ P D + Q +D L K + D +R +
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 260 AEMLLNHPFV 269
+ L HP++
Sbjct: 312 VDEALQHPYI 321
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 29/265 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 113
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L R + +NN L + + + +
Sbjct: 114 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 169
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
G+ ++++ FVH D+ +N +V ++ KI DFG+ + D + + G L
Sbjct: 170 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 225
Query: 176 --YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELP 232
+MSPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+
Sbjct: 226 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 285
Query: 233 NIPGDLSEQGKDFLIKCFLKDPKRR 257
N P L E + C+ +PK R
Sbjct: 286 NCPDMLFE----LMRMCWQYNPKMR 306
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 76
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L R + +NN L + + + +
Sbjct: 77 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 132
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
G+ ++++ FVH D+ +N +V ++ KI DFG+ + + + +M
Sbjct: 133 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
SPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+ N P
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD 252
Query: 237 DLSEQGKDFLIKCFLKDPKRR 257
L E + C+ +PK R
Sbjct: 253 MLLE----LMRMCWQYNPKMR 269
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 72 YSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVH 131
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I + ++H
Sbjct: 74 YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 132 CDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPC 191
D++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIE-DAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 192 DIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 192 DVWSFGILLTEIVT 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 12/197 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V + + + +AVKS S E + Q+ ++VR
Sbjct: 17 LGAGQFGEVWMGYYNGHTK-----VAVKSLKQGSMSPDAFLAEANLMKQLQ-HQRLVRL- 69
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y+ E Y ++ EY GSL D +K + +L + + + +G+ I +
Sbjct: 70 ---YAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 125
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
++H +++ N+LV D KIADFGLA+ D E + + + +PE++N +
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFT 184
Query: 189 APCDIWALGCAVVEMAS 205
D+W+ G + E+ +
Sbjct: 185 IKSDVWSFGILLTEIVT 201
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 90/186 (48%), Gaps = 9/186 (4%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++ EY GSL D K+N+G+ + R + G++++ G+VH D+ +N+L+
Sbjct: 100 IVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILIN 158
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENEYEAPCDIWALGCAVV 201
N K++DFGL++ D E + + P+ + +PE++ ++ + D+W+ G +
Sbjct: 159 SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMW 218
Query: 202 EMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWT 259
E+ S +P W + + + G LP+ P D ++ C+ K+ R
Sbjct: 219 EVVSYGERPYWEMTNQDVIKA----VEEGYRLPS-PMDCPAALYQLMLDCWQKERNSRPK 273
Query: 260 AEMLLN 265
+ ++N
Sbjct: 274 FDEIVN 279
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 85
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L R + +NN L + + + +
Sbjct: 86 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
G+ ++++ FVH D+ +N +V ++ KI DFG+ + + + +M
Sbjct: 142 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
SPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+ N P
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD 261
Query: 237 DLSEQGKDFLIKCFLKDPKRR 257
L E + C+ +PK R
Sbjct: 262 MLFE----LMRMCWQYNPKMR 278
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 78 ERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQ 137
+RFY L+ E GS+ + K+ + E + + + L +H+KG H D+K +
Sbjct: 84 DRFY-LVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDLKPE 140
Query: 138 NVLVFDNDEA---KIADFGLAKKSSCDGERS-----QSFECRGTPLYMSPESVNE----- 184
N+L ++ KI DF L +G+ S + G+ YM+PE V
Sbjct: 141 NILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEA 200
Query: 185 NEYEAPCDIWALGCAVVEMASGKP----------AWNHKQDSNVFSLLIRIGVGDELPNI 234
+ Y+ CD+W+LG + + SG P W+ + ++ + +
Sbjct: 201 SIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEF 260
Query: 235 P----GDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV--CADDQT 275
P +S KD + K ++D K+R +A +L HP+V CA + T
Sbjct: 261 PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENT 307
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 47/272 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV 65
G IG GSFG+V K + +AVK P+ PQ +
Sbjct: 13 GQRIGSGSFGTVYKGK-------WHGDVAVKMLNVTAPT-----------------PQQL 48
Query: 66 RCFGDDYSFEKGERFYNLLL--EYASRGSLAD--------------RVKKQNNGRLQESD 109
+ F ++ + R N+LL Y++ LA + + ++ D
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 108
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ R T +G+ ++H+K +H D+K N+ + ++ KI DFGLA S Q +
Sbjct: 109 IARQTA---QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 170 CRGTPLYMSPESV---NENEYEAPCDIWALGCAVVEMASGK-PAWNHKQDSNVFSLLIRI 225
G+ L+M+PE + ++N Y D++A G + E+ +G+ P N + ++ R
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 225
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ +L + + + K + +C K R
Sbjct: 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 19 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY +++E+ + G+L D +++ N + + + + ++ K
Sbjct: 74 G---VCTREPPFY-IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYN 185
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P+IV +G + +G + N+ +E GSL VK+Q G L E Y L+GL
Sbjct: 145 PRIVPLYG---AVREGP-WVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGL 198
Query: 122 RHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFE---CRGTPLYM 177
++HS+ +H D+K NVL+ D A + DFG A DG GT +M
Sbjct: 199 EYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHM 258
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
+PE V +A D+W+ C ++ M +G W
Sbjct: 259 APEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWT 292
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 35/282 (12%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIV-- 65
V+G G+FG V A+ + S + A+K T+ +E L + Q V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYY----AIKKIRHTEEKLSTILSEVMLLASLN--HQYVVR 66
Query: 66 --------RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM 117
R F + K + + +EY +L D + +N + Q + R R +
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQ-QRDEYWRLFRQI 125
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKK------------SSCDGERS 165
L+ L +IHS+G +H D+K N+ + ++ KI DFGLAK + G
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 166 QSFECRGTPLYMSPESVN-ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIR 224
GT +Y++ E ++ Y D+++LG EM P + N+ L
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKLRS 243
Query: 225 IGVGDELPNIPGDLSEQGKDFLIKCFL-KDPKRRWTAEMLLN 265
+ + E P D + + +I+ + DP +R A LLN
Sbjct: 244 VSI--EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P+IV +G + +G + N+ +E GSL VK+Q G L E Y L+GL
Sbjct: 126 PRIVPLYG---AVREGP-WVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGL 179
Query: 122 RHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFE---CRGTPLYM 177
++HS+ +H D+K NVL+ D A + DFG A DG GT +M
Sbjct: 180 EYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHM 239
Query: 178 SPESVNENEYEAPCDIWALGCAVVEMASGKPAWN 211
+PE V +A D+W+ C ++ M +G W
Sbjct: 240 APEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWT 273
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 26 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 80
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY +++E+ + G+L D +++ N + + + + ++ K
Sbjct: 81 G---VCTREPPFY-IIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 192
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V V ++ +AVK+ + E + +I P +V+
Sbjct: 19 LGGGQFGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 74 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYN 185
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL 223
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 29/265 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 78
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD-----RVKKQNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L R + +NN L + + + +
Sbjct: 79 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
G+ ++++ FVH D+ +N V ++ KI DFG+ + D + + G L
Sbjct: 135 ADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 190
Query: 176 --YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELP 232
+MSPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 250
Query: 233 NIPGDLSEQGKDFLIKCFLKDPKRR 257
N P L E + C+ +PK R
Sbjct: 251 NCPDMLLE----LMRMCWQYNPKMR 271
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 117/265 (44%), Gaps = 29/265 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 91
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKK-----QNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L ++ NN L + + + +
Sbjct: 92 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 147
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
G+ ++++ FVH D+ +N +V ++ KI DFG+ + D + + G L
Sbjct: 148 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 203
Query: 176 --YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELP 232
+MSPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 263
Query: 233 NIPGDLSEQGKDFLIKCFLKDPKRR 257
N P L E + C+ +PK R
Sbjct: 264 NCPDMLFE----LMRMCWQYNPKMR 284
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 117/265 (44%), Gaps = 29/265 (10%)
Query: 9 IGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPP--SSVTLKNEKEALDQIGICPQIV 65
+G GSFG V A V + P + +A+K+ + + NE + + C +V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN-CHHVV 81
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKK-----QNNGRLQESDVKRYTR---SM 117
R G +G+ +++E +RG L ++ NN L + + + +
Sbjct: 82 RLLG---VVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 137
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-- 175
G+ ++++ FVH D+ +N +V ++ KI DFG+ + D + + G L
Sbjct: 138 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLP 193
Query: 176 --YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELP 232
+MSPES+ + + D+W+ G + E+A+ + + + V ++ G+ D+
Sbjct: 194 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 253
Query: 233 NIPGDLSEQGKDFLIKCFLKDPKRR 257
N P L E + C+ +PK R
Sbjct: 254 NCPDMLFE----LMRMCWQYNPKMR 274
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 40/190 (21%)
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YY 191
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL---------- 222
+PE + Y+ DIW++GC + EM G P +H Q + V L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 223 ----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRWT 259
+R V + P++ P D + Q +D L K + D +R +
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 260 AEMLLNHPFV 269
+ L HP++
Sbjct: 312 VDEALQHPYI 321
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 31/274 (11%)
Query: 9 IGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-----CP 62
+G GSFG V A + E + +AVK+ + S +L+ E L++ + C
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 80
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK------KQNNGR----LQESDVKR 112
+VR G KG+ +++E + G L ++ + N GR LQE + +
Sbjct: 81 HVVRLLG---VVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE--MIQ 134
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ G+ ++++K FVH D+ +N +V + KI DFG+ + + +
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL 194
Query: 173 TPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDEL 231
+M+PES+ + + D+W+ G + E+ S + + + V ++ G D+
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Query: 232 PNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLN 265
N P E+ D + C+ +P R T ++N
Sbjct: 255 DNCP----ERVTDLMRMCWQFNPNMRPTFLEIVN 284
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 22 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 76
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY +++E+ + G+L D +++ N + + + + ++ K
Sbjct: 77 G---VCTREPPFY-IIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 132
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYN 188
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 226
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 40/190 (21%)
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YY 191
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL---------- 222
+PE + Y+ DIW++GC + EM G P +H Q + V L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 223 ----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRWT 259
+R V + P++ P D + Q +D L K + D +R +
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 260 AEMLLNHPFV 269
+ L HP++
Sbjct: 312 VDEALQHPYI 321
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAV-KSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G+FG+V + + K+ A+ P L E + Q+ P IVR
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRM 77
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G + E + L++E A G L + Q N +++ ++ + G++++
Sbjct: 78 IG----ICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES 130
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENE 186
FVH D+ +NVL+ AKI+DFGL+K D ++ P+ + +PE +N +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 187 YEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ + D+W+ G + E S G+ + + S V ++L + E P + D
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----GERMGCPAGCPREMYDL 246
Query: 246 LIKCFLKDPKRR 257
+ C+ D + R
Sbjct: 247 MNLCWTYDVENR 258
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAV-KSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G+FG+V + + K+ A+ P L E + Q+ P IVR
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRM 77
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G + E + L++E A G L + Q N +++ ++ + G++++
Sbjct: 78 IG----ICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES 130
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENE 186
FVH D+ +NVL+ AKI+DFGL+K D ++ P+ + +PE +N +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 187 YEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ + D+W+ G + E S G+ + + S V ++L + E P + D
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----GERMGCPAGCPREMYDL 246
Query: 246 LIKCFLKDPKRR 257
+ C+ D + R
Sbjct: 247 MNLCWTYDVENR 258
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 92 SLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEA--KI 149
+L + +KK V+++ S+L+ L +H +HCD+K +N+L+ + K+
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV 243
Query: 150 ADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPA 209
DFG SSC E + + + Y +PE + Y P D+W+LGC + E+ +G P
Sbjct: 244 IDFG----SSCY-EHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298
Query: 210 WNHKQDSNVFSLLIRIGVGDELPNIPG----DLSEQGKDFL 246
+ + + + +I EL +P D S++ K+F+
Sbjct: 299 LPGEDEGDQLACMI------ELLGMPXQKLLDASKRAKNFV 333
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAV-KSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G+FG+V + + K+ A+ P L E + Q+ P IVR
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRM 93
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G + E + L++E A G L + Q N +++ ++ + G++++
Sbjct: 94 IG----ICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENE 186
FVH D+ +NVL+ AKI+DFGL+K D ++ P+ + +PE +N +
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 187 YEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ + D+W+ G + E S G+ + + S V ++L + E P + D
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----GERMGCPAGCPREMYDL 262
Query: 246 LIKCFLKDPKRR 257
+ C+ D + R
Sbjct: 263 MNLCWTYDVENR 274
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAV-KSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G+FG+V + + K+ A+ P L E + Q+ P IVR
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRM 93
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G + E + L++E A G L + Q N +++ ++ + G++++
Sbjct: 94 IG----ICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENE 186
FVH D+ +NVL+ AKI+DFGL+K D ++ P+ + +PE +N +
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 187 YEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ + D+W+ G + E S G+ + + S V ++L + E P + D
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----GERMGCPAGCPREMYDL 262
Query: 246 LIKCFLKDPKRR 257
+ C+ D + R
Sbjct: 263 MNLCWTYDVENR 274
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---Y 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 311 SVDDALQHPYI 321
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAV-KSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G+FG+V + + K+ A+ P L E + Q+ P IVR
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRM 73
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G + E + L++E A G L + Q N +++ ++ + G++++
Sbjct: 74 IG----ICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES 126
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENE 186
FVH D+ +NVL+ AKI+DFGL+K D ++ P+ + +PE +N +
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 187 YEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ + D+W+ G + E S G+ + + S V ++L + E P + D
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----GERMGCPAGCPREMYDL 242
Query: 246 LIKCFLKDPKRR 257
+ C+ D + R
Sbjct: 243 MNLCWTYDVENR 254
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR---Y 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 311 SVDDALQHPYI 321
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 84/197 (42%), Gaps = 34/197 (17%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGER 164
L+ + VK + +L+GL H +H D+K QN+L+ + K+ DFGLA+ G
Sbjct: 105 LELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR---AFGIP 161
Query: 165 SQSFECRGTPL-YMSPESV-NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLL 222
+F L Y +P+ + Y DIW+ GC + EM +GKP + D L+
Sbjct: 162 VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
Query: 223 IRI-GVGDEL------------PNI----PGDLSEQGK------------DFLIKCFLKD 253
I G +E PNI P DL + + DFL +
Sbjct: 222 FDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLN 281
Query: 254 PKRRWTAEMLLNHPFVC 270
P R +A+ L+HP+
Sbjct: 282 PDMRLSAKQALHHPWFA 298
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPS--SVTLKNEKEALDQIGICP 62
G +G G+FG V A A + E L +AVK + L +E + + +G
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 63 QIVRCFGDDYSFEKGERF-------YNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTR 115
IV G G Y LL + R + AD + K++ L+ D+ ++
Sbjct: 103 NIVNLLGA--CTHGGPVLVITEYCCYGDLLNFLRRKAEAD-LDKEDGRPLELRDLLHFSS 159
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
+ +G+ + SK +H D+ +NVL+ + AKI DFGLA+ D R
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMAS 205
+M+PES+ + Y D+W+ G + E+ S
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 94/215 (43%), Gaps = 23/215 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEAL-------DQ 57
G +G G+FG V A A + E L +AVK S +EKEAL
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-----KSTAHADEKEALMSELKIMSH 105
Query: 58 IGICPQIVRCFGDDYSFEKGERF-------YNLLLEYASRGSLADRVKKQNNGRLQESDV 110
+G IV G G Y LL + R + AD + K++ L+ D+
Sbjct: 106 LGQHENIVNLLGA--CTHGGPVLVITEYCCYGDLLNFLRRKAEAD-LDKEDGRPLELRDL 162
Query: 111 KRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFEC 170
++ + +G+ + SK +H D+ +NVL+ + AKI DFGLA+ D
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 171 RGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS 205
R +M+PES+ + Y D+W+ G + E+ S
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAV-KSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G+FG+V + + K+ A+ P L E + Q+ P IVR
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRM 91
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G + E + L++E A G L + Q N +++ ++ + G++++
Sbjct: 92 IG----ICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES 144
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENE 186
FVH D+ +NVL+ AKI+DFGL+K D ++ P+ + +PE +N +
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 187 YEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ + D+W+ G + E S G+ + + S V ++L + E P + D
Sbjct: 205 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----GERMGCPAGCPREMYDL 260
Query: 246 LIKCFLKDPKRR 257
+ C+ D + R
Sbjct: 261 MNLCWTYDVENR 272
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAV-KSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G+FG+V + + K+ A+ P L E + Q+ P IVR
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRM 71
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G + E + L++E A G L + Q N +++ ++ + G++++
Sbjct: 72 IG----ICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES 124
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENE 186
FVH D+ +NVL+ AKI+DFGL+K D ++ P+ + +PE +N +
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 187 YEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ + D+W+ G + E S G+ + + S V ++L + E P + D
Sbjct: 185 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----GERMGCPAGCPREMYDL 240
Query: 246 LIKCFLKDPKRR 257
+ C+ D + R
Sbjct: 241 MNLCWTYDVENR 252
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 15/252 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAV-KSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G+FG+V + + K+ A+ P L E + Q+ P IVR
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRM 83
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G + E + L++E A G L + Q N +++ ++ + G++++
Sbjct: 84 IG----ICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES 136
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENE 186
FVH D+ +NVL+ AKI+DFGL+K D ++ P+ + +PE +N +
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 187 YEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDF 245
+ + D+W+ G + E S G+ + + S V ++L + E P + D
Sbjct: 197 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK----GERMGCPAGCPREMYDL 252
Query: 246 LIKCFLKDPKRR 257
+ C+ D + R
Sbjct: 253 MNLCWTYDVENR 264
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC----- 61
+VIG G FG V + K + S +A+K+ T + +E L + I
Sbjct: 20 EVIGAGEFGEVCRGRL-KAPGKKESCVAIKTLK----GGYTERQRREFLSEASIMGQFEH 74
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P I+R G +L E+ G+L D + N+G+ + R + G+
Sbjct: 75 PNIIRLEG----VVTNSMPVMILTEFMENGAL-DSFLRLNDGQFTVIQLVGMLRGIASGM 129
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAK---KSSCDGERSQSFECRGTPLYMS 178
R++ +VH D+ +N+LV N K++DFGL++ ++S D + S + + +
Sbjct: 130 RYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 179 PESVNENEYEAPCDIWALGCAVVEMAS--GKPAWN 211
PE++ ++ + D W+ G + E+ S +P W+
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 224
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 21 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY +++E+ + G+L D +++ N + + + + ++ K
Sbjct: 76 G---VCTREPPFY-IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 187
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 21 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY +++E+ + G+L D +++ N + + + + ++ K
Sbjct: 76 G---VCTREPPFY-IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 187
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 20/275 (7%)
Query: 6 GDVIGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + + +AVK + S L +E + L IG
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKR---------- 112
+V G + K +++E+ G+L+ ++ + N + D+ +
Sbjct: 92 NVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + + + R
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 173 TPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDEL 231
+M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRA 268
Query: 232 PNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 269 PDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 72
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+++ G L D V++ + + + +
Sbjct: 73 ASVDNPHVCRLLGICLT-----STVQLIMQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQ 126
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 185
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 241
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 242 PPICTIDVYMIMVKCWMIDADSR 264
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 23 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ E GSL D ++++ + + R + G++
Sbjct: 78 NIIRLEG----VVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 133 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 247
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 248 AALYQLMLDCWQKDRNNRPKFEQIVS 273
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 107/242 (44%), Gaps = 42/242 (17%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
IG GSFG+V K + +AVK P+ P+ + F
Sbjct: 44 IGSGSFGTVYKGK-------WHGDVAVKILKVVDPT-----------------PEQFQAF 79
Query: 69 GDDYSFEKGERFYNLLL--EYASRGSLADRVK------KQNNGRLQESDVKRY-----TR 115
++ + + R N+LL Y ++ +LA + + +QE+ + + R
Sbjct: 80 RNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIAR 139
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
+G+ ++H+K +H D+K N+ + + KI DFGLA S Q + G+ L
Sbjct: 140 QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Query: 176 YMSPESV---NENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELP 232
+M+PE + + N + D+++ G + E+ +G+ ++H + + ++ +G G P
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QIIFMVGRGYASP 257
Query: 233 NI 234
++
Sbjct: 258 DL 259
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC----- 61
+VIG G FG V + K + S +A+K+ T + +E L + I
Sbjct: 22 EVIGAGEFGEVCRGRL-KAPGKKESCVAIKTLK----GGYTERQRREFLSEASIMGQFEH 76
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P I+R G +L E+ G+L D + N+G+ + R + G+
Sbjct: 77 PNIIRLEG----VVTNSMPVMILTEFMENGAL-DSFLRLNDGQFTVIQLVGMLRGIASGM 131
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAK---KSSCDGERSQSFECRGTPLYMS 178
R++ +VH D+ +N+LV N K++DFGL++ ++S D + S + + +
Sbjct: 132 RYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 179 PESVNENEYEAPCDIWALGCAVVEMAS--GKPAWN 211
PE++ ++ + D W+ G + E+ S +P W+
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 226
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 71
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+++ G L D V++ + + + +
Sbjct: 72 ASVDNPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 184
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 240
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSR 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 52 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ E GSL D ++++ + + R + G++
Sbjct: 107 NIIRLEG----VVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G+VH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 276
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 75
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+++ G L D V++ + + + +
Sbjct: 76 ASVDNPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 129
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 188
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 244
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 245 PPICTIDVYMIMVKCWMIDADSR 267
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 74
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+++ G L D V++ + + + +
Sbjct: 75 ASVDNPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 128
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 187
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 243
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSR 266
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 73
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+++ G L D V++ + + + +
Sbjct: 74 ASVDNPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 127
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 186
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 242
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 243 PPICTIDVYMIMVKCWMIDADSR 265
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
VIG G FG V + KV + +A+K+ + T K ++ L + I P
Sbjct: 15 VIGVGEFGEVCSGRL-KVPGKREICVAIKTLK----AGYTDKQRRDFLSEASIMGQFDHP 69
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+ G + ++ EY GSL D ++N+GR + R + G++
Sbjct: 70 NIIHLEG----VVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMK 124
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ +VH D+ +N+LV N K++DFG+++ D E + + P+ + +PE+
Sbjct: 125 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWN 211
+ ++ + D+W+ G + E+ S +P W+
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 72
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+++ G L D V++ + + + +
Sbjct: 73 ASVDNPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 126
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 185
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 241
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 242 PPICTIDVYMIMVKCWMIDADSR 264
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 26 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 80
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 81 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYN 192
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
WL D++G G+ +V + K F ++ + + P V ++ E E L ++
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLF-AIKVFNNISFLRPVDVQMR-EFEVLKKLN-HK 67
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGR-LQESDVKRYTRSMLKGL 121
IV+ F + E R L++E+ GSL +++ +N L ES+ R ++ G+
Sbjct: 68 NIVKLFAIEE--ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEA----KIADFGLAKKSSCDGERSQSFECRGTPLYM 177
H+ G VH +IK N++ ++ K+ DFG A++ D Q GT Y+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD---EQFVXLYGTEEYL 182
Query: 178 SPESV--------NENEYEAPCDIWALGCAVVEMASG 206
P+ ++ +Y A D+W++G A+G
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 3 WLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICP 62
WL D++G G+ +V + K F ++ + + P V ++ E E L ++
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLF-AIKVFNNISFLRPVDVQMR-EFEVLKKLN-HK 67
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGR-LQESDVKRYTRSMLKGL 121
IV+ F + E R L++E+ GSL +++ +N L ES+ R ++ G+
Sbjct: 68 NIVKLFAIEE--ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEA----KIADFGLAKKSSCDGERSQSFECRGTPLYM 177
H+ G VH +IK N++ ++ K+ DFG A++ D Q GT Y+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD---EQFVSLYGTEEYL 182
Query: 178 SPESV--------NENEYEAPCDIWALGCAVVEMASG 206
P+ ++ +Y A D+W++G A+G
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
VIG G FG V + KV + +A+K+ + T K ++ L + I P
Sbjct: 21 VIGVGEFGEVCSGRL-KVPGKREICVAIKTLK----AGYTDKQRRDFLSEASIMGQFDHP 75
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+ G + ++ EY GSL D ++N+GR + R + G++
Sbjct: 76 NIIHLEG----VVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMK 130
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ +VH D+ +N+LV N K++DFG+++ D E + + P+ + +PE+
Sbjct: 131 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWN 211
+ ++ + D+W+ G + E+ S +P W+
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 222
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 20/275 (7%)
Query: 6 GDVIGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + + +AVK + S L +E + L IG
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKR---------- 112
+V G + K +++E+ G+L+ ++ + N + D+ +
Sbjct: 92 NVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + + + R
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 173 TPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDEL 231
+M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 268
Query: 232 PNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 269 PDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 21 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 76 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 131
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 187
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTR---Y 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL--------- 222
Y +PE + Y+ DIW++GC + EM G P +H Q + V L
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250
Query: 223 -----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRW 258
+R V + P++ P D + Q +D L K + D +R
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRI 310
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 311 SVDEALQHPYI 321
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 2 EWLRGDVIGHGSFGSV--------NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKE 53
E+ G ++G G FG+V L A KV ++ +D SVT E
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRN-RVLGWSPLSD----SVTCPLEVA 86
Query: 54 ALDQIGIC---PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDV 110
L ++G P ++R D+ FE E F +L L D + ++ G L E
Sbjct: 87 LLWKVGAGGGHPGVIRLL--DW-FETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPS 141
Query: 111 KRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ + ++ ++H HS+G VH DIK +N+L+ AK+ DFG + E F+
Sbjct: 142 RCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG--SGALLHDEPYTDFD 199
Query: 170 CRGTPLYMSPESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVG 228
GT +Y PE ++ ++Y A P +W+LG + +M G + Q+ L
Sbjct: 200 --GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL------- 250
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
+ P +S + +C P R + E +L P++
Sbjct: 251 ----HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 19/215 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPS--SVTLKNEKEALDQIGICP 62
G +G G+FG V A A + E L +AVK + L +E + + +G
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQN------------NGRLQESDV 110
IV G G ++ EY G L + +++++ N L D+
Sbjct: 111 NIVNLLGA--CTHGGPVL--VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 111 KRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFEC 170
++ + +G+ + SK +H D+ +NVL+ + AKI DFGLA+ D
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 171 RGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS 205
R +M+PES+ + Y D+W+ G + E+ S
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 38/272 (13%)
Query: 9 IGHGSFGSVNLAKASKVS-SEFPSLMAVKSCADCPPSSVTLKN---EKEALDQIGICPQI 64
+G G+FG V LA+ +S ++ L+AVK+ D P+ K+ E E L + I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD--PTLAARKDFQREAELLTNLQ-HEHI 79
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSL--------------ADRVKKQNNGRLQESDV 110
V+ +G G+ ++ EY G L D +Q G L S +
Sbjct: 80 VKFYG---VCGDGDPLI-MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 111 KRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFEC 170
+ G+ ++ S+ FVH D+ +N LV N KI DFG+++ D + +
Sbjct: 136 LHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRV 191
Query: 171 RGTPL----YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRI 225
G + +M PES+ ++ D+W+ G + E+ + GK W ++ V + +
Sbjct: 192 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ- 250
Query: 226 GVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
G E P + ++ D ++ C+ ++P++R
Sbjct: 251 GRVLERPRV---CPKEVYDVMLGCWQREPQQR 279
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 25 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 79
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 80 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 135
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 191
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 32/226 (14%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEAL--------- 55
G +G G+FG V A A + E L +AVK S +EKEAL
Sbjct: 36 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-----KSTAHADEKEALMSELKIMSH 90
Query: 56 --------DQIGIC----PQIVR----CFGDDYSFEKGERFYNLLLEYASRGSLADRVKK 99
+ +G C P +V C+GD +F + + +L + G + + K
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR-RKAEAMLGPSLAPGQDPEGLDK 149
Query: 100 QNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSS 159
++ L+ D+ ++ + +G+ + SK +H D+ +NVL+ + AKI DFGLA+
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 160 CDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS 205
D R +M+PES+ + Y D+W+ G + E+ S
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 26 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 80
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 81 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 192
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V + V ++ +AVK+ + E + +I P +V+
Sbjct: 40 LGGGQYGEVYVG----VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 94
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G E + ++ EY G+L D +++ N + + + + ++ K
Sbjct: 95 G----VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN 150
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 206
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
+ D+WA G + E+A+ G + S V+ LL
Sbjct: 207 TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLL 244
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 39/278 (14%)
Query: 9 IGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-----CP 62
+G GSFG V A + E + +AVK+ + S +L+ E L++ + C
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 80
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK------KQNNGR----LQESDVKR 112
+VR G KG+ +++E + G L ++ + N GR LQE + +
Sbjct: 81 HVVRLLG---VVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE--MIQ 134
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ G+ ++++K FVH ++ +N +V + KI DFG+ + D + + G
Sbjct: 135 MAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGG 190
Query: 173 TPL----YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
L +M+PES+ + + D+W+ G + E+ S + + + V ++ G
Sbjct: 191 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 250
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLN 265
D+ N P E+ D + C+ +P R T ++N
Sbjct: 251 LDQPDNCP----ERVTDLMRMCWQFNPNMRPTFLEIVN 284
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLK--NEKEALDQIGIC-PQIV 65
+G GSFG V+ K + + C V L+ +E + G+ P+IV
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQ------------CAVKKVRLEVFRVEELVACAGLSSPRIV 113
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+G + +G + N+ +E GSL +K+ G L E Y L+GL ++H
Sbjct: 114 PLYG---AVREGP-WVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLH 167
Query: 126 SKGFVHCDIKLQNVLVF-DNDEAKIADFGLAKKSSCDGERSQSFE---CRGTPLYMSPES 181
++ +H D+K NVL+ D A + DFG A DG GT +M+PE
Sbjct: 168 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNH 212
V +A DIW+ C ++ M +G W
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 40/190 (21%)
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YY 191
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL---------- 222
+PE + Y+ DIW++GC + EM G P +H Q + V L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 223 ----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRWT 259
+R V + P++ P D + Q +D L K + D +R +
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 260 AEMLLNHPFV 269
+ L HP++
Sbjct: 312 VDEALQHPYI 321
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 9 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 122
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 178
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 227
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 228 SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 40/190 (21%)
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R Y
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YY 229
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV-------- 227
+PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 228 ----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRWT 259
G P + P D + Q +D L K + DP +R +
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
Query: 260 AEMLLNHPFV 269
+ L HP++
Sbjct: 350 VDDALQHPYI 359
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 21 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 76 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 131
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 187
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLK--NEKEALDQIGIC-PQIV 65
+G GSFG V+ K + + C V L+ +E + G+ P+IV
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQ------------CAVKKVRLEVFRVEELVACAGLSSPRIV 129
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+G + +G + N+ +E GSL +K+ G L E Y L+GL ++H
Sbjct: 130 PLYG---AVREGP-WVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLH 183
Query: 126 SKGFVHCDIKLQNVLVF-DNDEAKIADFGLAKKSSCDGERSQSFE---CRGTPLYMSPES 181
++ +H D+K NVL+ D A + DFG A DG GT +M+PE
Sbjct: 184 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNH 212
V +A DIW+ C ++ M +G W
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAV-KSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G+FG+V + + K+ A+ P L E + Q+ P IVR
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRM 435
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G + E + L++E A G L + Q N +++ ++ + G++++
Sbjct: 436 IG----ICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES 488
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENE 186
FVH D+ +NVL+ AKI+DFGL+K D ++ P+ + +PE +N +
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 187 YEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
+ + D+W+ G + E S G+ + + S V ++L
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 585
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 34 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 88
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 89 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 144
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 200
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 201 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 238
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 39/278 (14%)
Query: 9 IGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGI-----CP 62
+G GSFG V A + E + +AVK+ + S +L+ E L++ + C
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 81
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVK------KQNNGR----LQESDVKR 112
+VR G KG+ +++E + G L ++ + N GR LQE + +
Sbjct: 82 HVVRLLG---VVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE--MIQ 135
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ G+ ++++K FVH ++ +N +V + KI DFG+ + D + + G
Sbjct: 136 MAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGG 191
Query: 173 TPL----YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
L +M+PES+ + + D+W+ G + E+ S + + + V ++ G
Sbjct: 192 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 251
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLN 265
D+ N P E+ D + C+ +P R T ++N
Sbjct: 252 LDQPDNCP----ERVTDLMRMCWQFNPNMRPTFLEIVN 285
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 10 GHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN-EKEALDQIGIC--PQIVR 66
G G+FG+V L K +A+K P +N E + + + + P IV+
Sbjct: 32 GQGTFGTVQLGKEKSTGMS----VAIKKVIQDP----RFRNRELQIMQDLAVLHHPNIVQ 83
Query: 67 CFGDDYSFEKGER-----FYNLLLEYASRGSLADRVKK--QNNGRLQESD----VKRYTR 115
Y + GER + N+++EY + D + + +N R Q + +K +
Sbjct: 84 L--QSYFYTLGERDRRDIYLNVVMEY-----VPDTLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 116 SMLK--GLRHIHSKGFVHCDIKLQNVLVFDND-EAKIADFGLAKKSSCDGERSQSFECRG 172
+++ G H+ S H DIK NVLV + D K+ DFG AKK S E + ++ C
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYIC-- 193
Query: 173 TPLYMSPESVNENE-YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI 225
+ Y +PE + N+ Y DIW++GC EM G+P + + ++R+
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 40/190 (21%)
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YY 191
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL---------- 222
+PE + Y+ DIW++GC + EM G P +H Q + V L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 223 ----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRWT 259
+R V + P++ P D + Q +D L K + D +R +
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 260 AEMLLNHPFV 269
+ L HP++
Sbjct: 312 VDEALQHPYI 321
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 38/202 (18%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAK---KSSCD 161
L + ++ + L+ ++ +H +H D+K N+L+ N + K+ DFGLA+ +S+ D
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 162 -----GERSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
G++S E T Y +PE + +Y D+W+ GC + E+ +P + +
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
Query: 216 SNVFSLLIRIGVGD--------------------ELPNIPGD--------LSEQGKDFLI 247
+ L+ I +G LP P ++ +G D L
Sbjct: 229 RHQLLLIFGI-IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQ 287
Query: 248 KCFLKDPKRRWTAEMLLNHPFV 269
+ + DP +R TA+ L HP++
Sbjct: 288 RMLVFDPAKRITAKEALEHPYL 309
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL--------- 222
Y +PE + Y+ DIW++GC + EM G P +H Q + V L
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250
Query: 223 -----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRW 258
+R V + P++ P D + Q +D L K + D +R
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 311 SVDEALQHPYI 321
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%), Gaps = 9/186 (4%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
+++E+ G+L D ++++G+ + R + G+R++ G+VH D+ +N+LV
Sbjct: 121 IVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVN 179
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENEYEAPCDIWALGCAVV 201
N K++DFGL++ D E + P+ + +PE++ ++ + D+W+ G +
Sbjct: 180 SNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMW 239
Query: 202 EMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWT 259
E+ S +P W+ + + I G LP P D ++ C+ K+ R
Sbjct: 240 EVMSYGERPYWDMSNQDVIKA----IEEGYRLPA-PMDCPAGLHQLMLDCWQKERAERPK 294
Query: 260 AEMLLN 265
E ++
Sbjct: 295 FEQIVG 300
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 191
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 251
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 252 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 311
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 312 SVDDALQHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 311 SVDDALQHPYI 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 189
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 190 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 249
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 250 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 309
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 310 SVDDALQHPYI 320
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 23 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 77
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 78 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 189
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 191
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL--------- 222
Y +PE + Y+ DIW++GC + EM G P +H Q + V L
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251
Query: 223 -----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRW 258
+R V + P++ P D + Q +D L K + D +R
Sbjct: 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 311
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 312 SVDEALQHPYI 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 191
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 251
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 252 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 311
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 312 SVDDALQHPYI 322
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 184
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 244
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 245 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 304
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 305 SVDDALQHPYI 315
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 311 SVDDALQHPYI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + G T
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRY 192
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL--------- 222
Y +PE + Y+ DIW++GC + EM G P +H Q + V L
Sbjct: 193 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 252
Query: 223 -----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRW 258
+R V + P++ P D + Q +D L K + D +R
Sbjct: 253 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 312
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 313 SVDEALQHPYI 323
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 26 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 80
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 81 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 192
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 40/190 (21%)
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R Y
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---YY 229
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV-------- 227
+PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 228 ----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRWT 259
G P + P D + Q +D L K + DP +R +
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
Query: 260 AEMLLNHPFV 269
+ L HP++
Sbjct: 350 VDDALQHPYI 359
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAV-KSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+G G+FG+V + + K+ A+ P L E + Q+ P IVR
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD-NPYIVRM 436
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSK 127
G + E + L++E A G L + Q N +++ ++ + G++++
Sbjct: 437 IG----ICEAESWM-LVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES 489
Query: 128 GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENE 186
FVH D+ +NVL+ AKI+DFGL+K D ++ P+ + +PE +N +
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 187 YEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
+ + D+W+ G + E S G+ + + S V ++L
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML 586
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 183
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 304 SVDDALQHPYI 314
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 116/258 (44%), Gaps = 17/258 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V LA + + + K ++ E L + P I++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKL- 73
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y K + +++EYA L D + +++ ++ E + +R+ + ++ + + H
Sbjct: 74 ---YDVIKSKDEIIMVIEYAG-NELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK 127
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
VH D+K +N+L+ ++ KIADFGL+ + DG ++ C G+P Y +PE ++ Y
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKT-SC-GSPNYAAPEVISGKLYA 184
Query: 189 AP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
P D+W+ G + M + ++ + +F + + + +P LS +
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK-----NISNGVYTLPKFLSPGAAGLIK 239
Query: 248 KCFLKDPKRRWTAEMLLN 265
+ + +P R + ++
Sbjct: 240 RMLIVNPLNRISIHEIMQ 257
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLK--NEKEALDQIGIC-PQIV 65
+G GSFG V+ K + + C V L+ +E + G+ P+IV
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQ------------CAVKKVRLEVFRVEELVACAGLSSPRIV 127
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIH 125
+G + +G + N+ +E GSL +K+ G L E Y L+GL ++H
Sbjct: 128 PLYG---AVREGP-WVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLH 181
Query: 126 SKGFVHCDIKLQNVLVF-DNDEAKIADFGLAKKSSCDGERSQSFE---CRGTPLYMSPES 181
++ +H D+K NVL+ D A + DFG A DG GT +M+PE
Sbjct: 182 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 182 VNENEYEAPCDIWALGCAVVEMASGKPAWNH 212
V +A DIW+ C ++ M +G W
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 21 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 76 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 187
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 184
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLI-RIGV------- 227
Y +PE + Y+ DIW++GC + EM K + + + ++ +I ++G
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 244
Query: 228 -----------------GDELPNI------PGD------LSEQGKDFLIKCFLKDPKRRW 258
G P + P D + Q +D L K + DP +R
Sbjct: 245 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 304
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 305 SVDDALQHPYI 315
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 23 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 77
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 78 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 189
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 30/272 (11%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 13 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITER--GALQEELARSFFWQVLEA 126
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 182
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V E +
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 237
Query: 239 SEQGKDFLIK-CFLKDPKRRWTAEMLLNHPFV 269
LI+ C P R T E + NHP++
Sbjct: 238 -------LIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 40/190 (21%)
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R Y
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YY 191
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL---------- 222
+PE + Y+ DIW++G + EM G P +H Q + V L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 223 ----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRWT 259
+R V + P++ P D + Q +D L K + D +R +
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 260 AEMLLNHPFV 269
+ L HP++
Sbjct: 312 VDEALQHPYI 321
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 26 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 80
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 81 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 136
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 192
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 38/202 (18%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAK---KSSCD 161
L + ++ + L+ ++ +H +H D+K N+L+ N + K+ DFGLA+ +S+ D
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 162 -----GERSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
G++S E T Y +PE + +Y D+W+ GC + E+ +P + +
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
Query: 216 SNVFSLLIRIGVGD--------------------ELPNIPGD--------LSEQGKDFLI 247
+ L+ I +G LP P ++ +G D L
Sbjct: 229 RHQLLLIFGI-IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQ 287
Query: 248 KCFLKDPKRRWTAEMLLNHPFV 269
+ + DP +R TA+ L HP++
Sbjct: 288 RMLVFDPAKRITAKEALEHPYL 309
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 31/267 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPS-LMAVKSCADCPPSSVT-LKNEKEALDQIGICPQIVR 66
+G G+FG V LA+ + E L+AVK+ D ++ E E L + IV+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ-HEHIVK 79
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNN-----------GRLQESDVKRYTR 115
+G +G+ ++ EY G L ++ L +S + +
Sbjct: 80 FYG---VCVEGDPLI-MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
+ G+ ++ S+ FVH D+ +N LV +N KI DFG+++ D + + G +
Sbjct: 136 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYRVGGHTM 191
Query: 176 ----YMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDE 230
+M PES+ ++ D+W+LG + E+ + GK W ++ V + + V
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR 251
Query: 231 LPNIPGDLSEQGKDFLIKCFLKDPKRR 257
P ++ E ++ C+ ++P R
Sbjct: 252 PRTCPQEVYE----LMLGCWQREPHMR 274
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 21 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 76 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 187
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 71
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 72 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 184
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 240
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSR 263
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 89/202 (44%), Gaps = 38/202 (18%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAK---KSSCD 161
L + ++ + L+ ++ +H +H D+K N+L+ N + K+ DFGLA+ +S+ D
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 162 -----GERSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
G++S E T Y +PE + +Y D+W+ GC + E+ +P + +
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
Query: 216 SNVFSLLIRIGVGD--------------------ELPNIPGD--------LSEQGKDFLI 247
+ L+ I +G LP P ++ +G D L
Sbjct: 229 RHQLLLIFGI-IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQ 287
Query: 248 KCFLKDPKRRWTAEMLLNHPFV 269
+ + DP +R TA+ L HP++
Sbjct: 288 RMLVFDPAKRITAKEALEHPYL 309
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 40/190 (21%)
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLY 176
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R Y
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR---YY 191
Query: 177 MSPESVNENEYEAPCDIWALGCAVVEMASGK---PAWNH-KQDSNVFSLL---------- 222
+PE + Y+ DIW++G + EM G P +H Q + V L
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 223 ----IRIGVGDE-----------LPNI--PGD------LSEQGKDFLIKCFLKDPKRRWT 259
+R V + P++ P D + Q +D L K + D +R +
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 260 AEMLLNHPFV 269
+ L HP++
Sbjct: 312 VDEALQHPYI 321
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 19 LGGGQYGEVY----EGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 74 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 129
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWT----APESLAYN 185
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELL 223
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 116/258 (44%), Gaps = 17/258 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V LA + + + K ++ E L + P I++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKL- 69
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y K + +++EYA L D + +++ ++ E + +R+ + ++ + + H
Sbjct: 70 ---YDVIKSKDEIIMVIEYAG-NELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK 123
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
VH D+K +N+L+ ++ KIADFGL+ + DG ++ C G+P Y +PE ++ Y
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKT-SC-GSPNYAAPEVISGKLYA 180
Query: 189 AP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
P D+W+ G + M + ++ + +F + + + +P LS +
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK-----NISNGVYTLPKFLSPGAAGLIK 235
Query: 248 KCFLKDPKRRWTAEMLLN 265
+ + +P R + ++
Sbjct: 236 RMLIVNPLNRISIHEIMQ 253
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 65
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 66 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 119
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 120 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 178
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 234
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 235 PPICTIDVYMIMVKCWMIDADSR 257
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V LA + + + K ++ E L + P I++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKL- 78
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y K + +++EYA L D + +++ ++ E + +R+ + ++ + + H
Sbjct: 79 ---YDVIKSKDEIIMVIEYAG-NELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK 132
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
VH D+K +N+L+ ++ KIADFGL+ + DG ++ C G+P Y +PE ++ Y
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKT-SC-GSPNYAAPEVISGKLYA 189
Query: 189 AP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
P D+W+ G + M + ++ + +F + + + +P LS +
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK-----NISNGVYTLPKFLSPGAAGLIK 244
Query: 248 KCFLKDPKRRWTAEMLL 264
+ + +P R + ++
Sbjct: 245 RMLIVNPLNRISIHEIM 261
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 73
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 74 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 127
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 186
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 242
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 243 PPICTIDVYMIMVKCWMIDADSR 265
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 71
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 72 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 184
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 240
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSR 263
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 74
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 75 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 128
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 187
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 243
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSR 266
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 96
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 97 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 150
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 151 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 209
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 265
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 266 PPICTIDVYMIMVKCWMIDADSR 288
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 74
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 75 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 128
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 187
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 243
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSR 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 22 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 76
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 77 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 132
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT----APESLAYN 188
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 226
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 30/272 (11%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 12 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 125
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 181
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V E +
Sbjct: 182 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 236
Query: 239 SEQGKDFLIK-CFLKDPKRRWTAEMLLNHPFV 269
LI+ C P R T E + NHP++
Sbjct: 237 -------LIRWCLALRPSDRPTFEEIQNHPWM 261
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 78
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 79 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 132
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 191
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 247
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSR 270
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 77
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 78 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 131
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 132 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 246
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 247 PPICTIDVYMIMVKCWMIDADSR 269
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G GSFG V LA + + + K ++ E L + P I++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKL- 79
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
Y K + +++EYA L D + +++ ++ E + +R+ + ++ + + H
Sbjct: 80 ---YDVIKSKDEIIMVIEYAG-NELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK 133
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
VH D+K +N+L+ ++ KIADFGL+ + DG ++ C G+P Y +PE ++ Y
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKT-SC-GSPNYAAPEVISGKLYA 190
Query: 189 AP-CDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLI 247
P D+W+ G + M + ++ + +F + + + +P LS +
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK-----NISNGVYTLPKFLSPGAAGLIK 245
Query: 248 KCFLKDPKRRWTAEMLL 264
+ + +P R + ++
Sbjct: 246 RMLIVNPLNRISIHEIM 262
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 118/298 (39%), Gaps = 66/298 (22%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN---EKEALDQIGICPQIV 65
IG G FGSV V + A+K SV +N E A +G +V
Sbjct: 15 IGSGEFGSV----FKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 70
Query: 66 RCFG----DDYSFEKGERFYNLLLEYASRGSLADRVKKQNN--GRLQESDVKRYTRSMLK 119
R F DD+ + E Y + GSLAD + + +E+++K + +
Sbjct: 71 RYFSAWAEDDHMLIQNE--------YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 120 GLRHIHSKGFVHCDIKLQNVLVF------------DNDE-------AKIADFGLAKKSSC 160
GLR+IHS VH DIK N+ + D D+ KI D G + S
Sbjct: 123 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS- 181
Query: 161 DGERSQSFECRGTPLYMSPESVNENEYEAP-CDIWALGCAVVEMASGKP------AWNHK 213
S E G +++ E + EN P DI+AL VV A +P W+
Sbjct: 182 ----SPQVE-EGDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQWHE- 235
Query: 214 QDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
IR G LP IP LS++ + L DP+RR +A L+ H + +
Sbjct: 236 ---------IRQG---RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 281
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 30/272 (11%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 9 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 122
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 178
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V E +
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 233
Query: 239 SEQGKDFLIK-CFLKDPKRRWTAEMLLNHPFV 269
LI+ C P R T E + NHP++
Sbjct: 234 -------LIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 21/260 (8%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G FG V L K +AVK + S E + + ++ P++V+ +
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----VAVKMIKEGSMSEDEFFQEAQTMMKLS-HPKLVKFY 69
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G E ++ EY S G L + ++ G L+ S + + +G+ + S
Sbjct: 70 G----VCSKEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYE 188
F+H D+ +N LV + K++DFG+ + D + S + + +PE + +Y
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMT-RYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 189 APCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDEL--PNIPGDLSEQGKDF 245
+ D+WA G + E+ S GK ++ +S V ++++ G L P++ D Q
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDLYTNSEV---VLKVSQGHRLYRPHLASDTIYQ---I 237
Query: 246 LIKCFLKDPKRRWTAEMLLN 265
+ C+ + P++R T + LL+
Sbjct: 238 MYSCWHELPEKRPTFQQLLS 257
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 29 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 142
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 198
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 247
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 248 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 23 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 77
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 78 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H D+ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT----APESLAYN 189
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 30/272 (11%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 14 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 127
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 183
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V E +
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 238
Query: 239 SEQGKDFLIK-CFLKDPKRRWTAEMLLNHPFV 269
LI+ C P R T E + NHP++
Sbjct: 239 -------LIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 29 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 142
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 198
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 247
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 248 SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 9 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 122
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 178
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV----------- 227
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 29 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 142
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 198
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 199 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 247
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 248 SXECQHLIRWCLALRPXDRPTFEEIQNHPWM 278
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 30/272 (11%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 13 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 126
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 182
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V E +
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 237
Query: 239 SEQGKDFLIK-CFLKDPKRRWTAEMLLNHPFV 269
LI+ C P R T E + NHP++
Sbjct: 238 -------LIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 28 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 141
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 197
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 246
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 247 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 30/272 (11%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 14 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 127
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 183
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V E +
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 238
Query: 239 SEQGKDFLIK-CFLKDPKRRWTAEMLLNHPFV 269
LI+ C P R T E + NHP++
Sbjct: 239 -------LIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 28 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 141
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 197
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 198 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 246
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 247 SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 48 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 161
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 162 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 217
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 218 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 266
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 267 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 41 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 154
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 210
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 259
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 260 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 30/272 (11%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 14 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 127
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 183
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V E +
Sbjct: 184 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH----- 238
Query: 239 SEQGKDFLIK-CFLKDPKRRWTAEMLLNHPFV 269
LI+ C P R T E + NHP++
Sbjct: 239 -------LIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 13/197 (6%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++ EY + G L + +++ + R Q + + + + + ++ SK F+H D+ +N LV
Sbjct: 96 IITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN 154
Query: 143 DNDEAKIADFGLAKKSSCDGERS---QSFECRGTPLYMSPESVNENEYEAPCDIWALGCA 199
D K++DFGL++ D E S F R +P PE + +++ + DIWA G
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP----PEVLMYSKFSSKSDIWAFGVL 210
Query: 200 VVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRW 258
+ E+ S GK + +S I G L P SE+ + C+ + R
Sbjct: 211 MWEIYSLGKMPYERFTNSETAE---HIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERP 266
Query: 259 TAEMLLNHPFVCADDQT 275
T ++LL++ D+++
Sbjct: 267 TFKILLSNILDVMDEES 283
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 56 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 169
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 225
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 274
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 275 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 111/266 (41%), Gaps = 23/266 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
V+G G FG V + + PS + T K ++ L + I P
Sbjct: 52 VVGAGEFGEVCSGRL-----KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+R G + ++ E GSL D ++++ + + R + G++
Sbjct: 107 NIIRLEG----VVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ G VH D+ +N+L+ N K++DFGL++ D E + + P+ + SPE+
Sbjct: 162 YLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLS 239
+ ++ + D+W+ G + E+ S +P W ++ + G LP P D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ----DVIKAVDEGYRLPP-PMDCP 276
Query: 240 EQGKDFLIKCFLKDPKRRWTAEMLLN 265
++ C+ KD R E +++
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
VIG G FG V + KV + +A+K+ + T K ++ L + I P
Sbjct: 36 VIGVGEFGEVCSGRL-KVPGKREICVAIKTLK----AGYTDKQRRDFLSEASIMGQFDHP 90
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
I+ G + ++ EY GSL D ++N+GR + R + G++
Sbjct: 91 NIIHLEGVVTKCKP----VMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMK 145
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPES 181
++ VH D+ +N+LV N K++DFG+++ D E + + P+ + +PE+
Sbjct: 146 YLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 182 VNENEYEAPCDIWALGCAVVEMAS--GKPAWN 211
+ ++ + D+W+ G + E+ S +P W+
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 237
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 36 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 149
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 150 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 205
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 206 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 254
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 255 SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 41 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 154
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 210
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV----------- 259
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 260 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 61 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 174
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 175 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 230
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 231 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 279
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 280 SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 310
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 42 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 155
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 211
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV----------- 260
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 261 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 20/214 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
VIG G FG V + K+ + +A+K+ S T K ++ L + I P
Sbjct: 40 VIGAGEFGEV-CSGHLKLPGKREIFVAIKTLK----SGYTEKQRRDFLSEASIMGQFDHP 94
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
++ G ++ E+ GSL D +QN+G+ + R + G++
Sbjct: 95 NVIHLEG----VVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMK 149
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAK---KSSCDGERSQSFECRGTPLYMSP 179
++ +VH D+ +N+LV N K++DFGL++ + D + + + + +P
Sbjct: 150 YLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 180 ESVNENEYEAPCDIWALGCAVVEMAS--GKPAWN 211
E++ ++ + D+W+ G + E+ S +P W+
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 243
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 42 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 155
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 211
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV----------- 260
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 261 SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 56 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 169
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 225
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------- 274
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 275 SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 41 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 154
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 210
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV----------- 259
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 260 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 82 NLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV 141
L+ +Y GSL D V+ Q+ G L + + + KG+ ++ G VH ++ +NVL+
Sbjct: 90 QLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL 148
Query: 142 FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVV 201
+ ++ADFG+A D ++ E + +M+ ES++ +Y D+W+ G V
Sbjct: 149 KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVW 208
Query: 202 EMAS 205
E+ +
Sbjct: 209 ELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 82 NLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV 141
L+ +Y GSL D V+ Q+ G L + + + KG+ ++ G VH ++ +NVL+
Sbjct: 108 QLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL 166
Query: 142 FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVV 201
+ ++ADFG+A D ++ E + +M+ ES++ +Y D+W+ G V
Sbjct: 167 KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVW 226
Query: 202 EMAS 205
E+ +
Sbjct: 227 ELMT 230
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 41 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 154
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 210
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 211 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV----------- 259
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 260 SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 35/278 (12%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCAD-CPPSSVT-LKNEKEALDQIGICP 62
G +G G FG V A A + + +AVK + PS + L +E L Q+ P
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQ---------------------- 100
+++ +G + G L++EYA GSL +++
Sbjct: 87 HVIKLYGA--CSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 101 NNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSC 160
+ L D+ + + +G++++ VH D+ +N+LV + + KI+DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 161 DGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVF 219
+ + + R +M+ ES+ ++ Y D+W+ G + E+ + G + +F
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
Query: 220 SLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+LL + G E P+ + SE+ +++C+ ++P +R
Sbjct: 263 NLL-KTGHRMERPD---NCSEEMYRLMLQCWKQEPDKR 296
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 42 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 155
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 211
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV----------- 260
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 261 SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 28/271 (10%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSC-ADCPPSSVTLKNEKEALDQIGICPQI 64
G ++G G FGSV +VS P +A+K D L N ++ + ++
Sbjct: 42 GPLLGSGGFGSV--YSGIRVSDNLP--VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 65 VRCFGDDYS----FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKG 120
F FE+ + F +L L D + ++ G LQE + + +L+
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA 155
Query: 121 LRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
+RH H+ G +H DIK +N+L+ + E K+ DFG S + + + GT +Y P
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPP 211
Query: 180 ESVNENEYEA-PCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDL 238
E + + Y +W+LG + +M G + H ++ + R V
Sbjct: 212 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV----------- 260
Query: 239 SEQGKDFLIKCFLKDPKRRWTAEMLLNHPFV 269
S + + + C P R T E + NHP++
Sbjct: 261 SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 97/226 (42%), Gaps = 39/226 (17%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEAL--------- 55
G +G G+FG V A A + E L +AVK S +EKEAL
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-----KSTAHADEKEALMSELKIMSH 105
Query: 56 --------DQIGIC----PQIVR----CFGDDYSFEKGERFYNLLLEYASRGSLADRVKK 99
+ +G C P +V C+GD +F + +R L EY+ S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGL--EYSYNPS------H 157
Query: 100 QNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSS 159
+L D+ ++ + +G+ + SK +H D+ +NVL+ + AKI DFGLA+
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 217
Query: 160 CDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS 205
D R +M+PES+ + Y D+W+ G + E+ S
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 30/267 (11%)
Query: 2 EWLRGDVIGHGSFGSVN----LAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQ 57
E+ + V+G G+FG+V + + KV + P + A P K KE LD+
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKV--KIPVAIMELREATSP------KANKEILDE 101
Query: 58 IGIC-----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKR 112
+ P + R G + L+ + G L D V++ + + +
Sbjct: 102 AYVMASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLN 155
Query: 113 YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRG 172
+ + KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E
Sbjct: 156 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGK 214
Query: 173 TPL-YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDE 230
P+ +M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GER 271
Query: 231 LPNIPGDLSEQGKDFLIKCFLKDPKRR 257
LP P + ++KC++ D R
Sbjct: 272 LPQ-PPICTIDVYMIMVKCWMIDADSR 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQ----IGIC 61
G+ +G G FG V + + +AVK A +T + K+ DQ + C
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTT------VAVKKLA--AMVDITTEELKQQFDQEIKVMAKC 81
Query: 62 PQ--IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVK-RYTRSML 118
+V G F L+ Y GSL DR+ + ++ + +
Sbjct: 82 QHENLVELLG----FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 137
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
G+ +H +H DIK N+L+ + AKI+DFGLA+ S + GT YM+
Sbjct: 138 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMA 197
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
PE++ E DI++ G ++E+ +G PA + ++ +
Sbjct: 198 PEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 237
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQ----IGIC 61
G+ +G G FG V + + +AVK A +T + K+ DQ + C
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTT------VAVKKLA--AMVDITTEELKQQFDQEIKVMAKC 87
Query: 62 PQ--IVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVK-RYTRSML 118
+V G F L+ Y GSL DR+ + ++ + +
Sbjct: 88 QHENLVELLG----FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 143
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMS 178
G+ +H +H DIK N+L+ + AKI+DFGLA+ S + GT YM+
Sbjct: 144 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMA 203
Query: 179 PESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
PE++ E DI++ G ++E+ +G PA + ++ +
Sbjct: 204 PEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 93/220 (42%), Gaps = 29/220 (13%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFPSL-MAVKSCADCPPSSVTLKNEKEAL-------DQ 57
G +G G+FG V A A + E L +AVK S +EKEAL
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-----KSTAHADEKEALMSELKIMSH 105
Query: 58 IGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQN------------NGRL 105
+G IV G G ++ EY G L + +++++ N
Sbjct: 106 LGQHENIVNLLGA--CTHGGPVL--VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 106 QESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERS 165
D+ ++ + +G+ + SK +H D+ +NVL+ + AKI DFGLA+ D
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
Query: 166 QSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS 205
R +M+PES+ + Y D+W+ G + E+ S
Sbjct: 222 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 75
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+++ G L D V++ + + + +
Sbjct: 76 ASVDNPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 129
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFG AK + E+ E P+
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIK 188
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 244
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 245 PPICTIDVYMIMVKCWMIDADSR 267
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 9/216 (4%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G+FGSV + + V + + E + + Q+ P IVR
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRLI 76
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + E L++E A G L + + + S+V + G++++ K
Sbjct: 77 G----VCQAEALM-LVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENEY 187
FVH D+ +NVL+ + AKI+DFGL+K D + PL + +PE +N ++
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 188 EAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLL 222
+ D+W+ G + E ++ G+ + + V + +
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 226
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 74
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 75 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 128
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 187
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQP 244
Query: 235 P 235
P
Sbjct: 245 P 245
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+ G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 78
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+++ G L D V++ + + + +
Sbjct: 79 ASVDNPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 132
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 191
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 247
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSR 270
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 81
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 82 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 135
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 136 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 194
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQP 251
Query: 235 P 235
P
Sbjct: 252 P 252
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 73
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+++ G L D V++ + + + +
Sbjct: 74 ASVDNPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 127
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFG AK + E+ E P+
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIK 186
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 242
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 243 PPICTIDVYMIMVKCWMIDADSR 265
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 119/277 (42%), Gaps = 22/277 (7%)
Query: 6 GDVIGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + + +AVK + S L +E + L IG
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNN------------GRLQESDV 110
+V G + K +++E+ G+L+ ++ + N L +
Sbjct: 94 NVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 111 KRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFEC 170
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + + +
Sbjct: 151 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 171 RGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGD 229
R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 230 ELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 271 RAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 68
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 69 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 122
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ +G+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 123 IAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 181
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 237
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 238 PPICTIDVYMIMVKCWMIDADSR 260
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 35/278 (12%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCAD-CPPSSVT-LKNEKEALDQIGICP 62
G +G G FG V A A + + +AVK + PS + L +E L Q+ P
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQ---------------------- 100
+++ +G + G L++EYA GSL +++
Sbjct: 87 HVIKLYGA--CSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 101 NNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSC 160
+ L D+ + + +G++++ VH D+ +N+LV + + KI+DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 161 DGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVF 219
+ + + R +M+ ES+ ++ Y D+W+ G + E+ + G + +F
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
Query: 220 SLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+LL + G E P+ + SE+ +++C+ ++P +R
Sbjct: 263 NLL-KTGHRMERPD---NCSEEMYRLMLQCWKQEPDKR 296
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 71
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 72 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 184
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQP 241
Query: 235 P 235
P
Sbjct: 242 P 242
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 35/278 (12%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCAD-CPPSSVT-LKNEKEALDQIGICP 62
G +G G FG V A A + + +AVK + PS + L +E L Q+ P
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN-HP 86
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQ---------------------- 100
+++ +G + G L++EYA GSL +++
Sbjct: 87 HVIKLYGA--CSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 101 NNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSC 160
+ L D+ + + +G++++ VH D+ +N+LV + + KI+DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 161 DGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVF 219
+ + + R +M+ ES+ ++ Y D+W+ G + E+ + G + +F
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262
Query: 220 SLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+LL + G E P+ + SE+ +++C+ ++P +R
Sbjct: 263 NLL-KTGHRMERPD---NCSEEMYRLMLQCWKQEPDKR 296
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSP 179
G+ +H +H DIK N+L+ + AKI+DFGLA+ S + GT YM+P
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
Query: 180 ESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVF 219
E++ E DI++ G ++E+ +G PA + ++ +
Sbjct: 205 EAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 118/298 (39%), Gaps = 66/298 (22%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN---EKEALDQIGICPQIV 65
IG G FGSV V + A+K SV +N E A +G +V
Sbjct: 17 IGSGEFGSV----FKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 66 RCFG----DDYSFEKGERFYNLLLEYASRGSLADRVKKQNN--GRLQESDVKRYTRSMLK 119
R F DD+ + E Y + GSLAD + + +E+++K + +
Sbjct: 73 RYFSAWAEDDHMLIQNE--------YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 120 GLRHIHSKGFVHCDIKLQNVLVF------------DNDE-------AKIADFGLAKKSSC 160
GLR+IHS VH DIK N+ + D D+ KI D G + S
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS- 183
Query: 161 DGERSQSFECRGTPLYMSPESVNENEYEAP-CDIWALGCAVVEMASGKP------AWNHK 213
S E G +++ E + EN P DI+AL VV A +P W+
Sbjct: 184 ----SPQVE-EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE- 237
Query: 214 QDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
IR G LP IP LS++ + L DP+RR +A L+ H + +
Sbjct: 238 ---------IRQG---RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 283
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 40/191 (20%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + R
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR---Y 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGK-----------------------PAWNH 212
Y +PE + Y+ DIW++GC + EM K PA+
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMK 250
Query: 213 KQDSNVFSLLIR----IGVGDE--LPNI--PGD------LSEQGKDFLIKCFLKDPKRRW 258
K V + + G E P++ P D + Q +D L K + D +R
Sbjct: 251 KLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 259 TAEMLLNHPFV 269
+ + L HP++
Sbjct: 311 SVDEALQHPYI 321
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCAD---CPPSSVTLKNEKEALDQI-GICPQI 64
+G G FG V K ++ S ++ + V + E L Q+ G+C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK- 74
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R ++ EY + G L + +++ + R Q + + + + + ++
Sbjct: 75 -------------QRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYL 120
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
SK F+H D+ +N LV D K++DFGL+ + D E + S + + PE +
Sbjct: 121 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMY 179
Query: 185 NEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
+++ + DIWA G + E+ S GK + +S I G L P SE+
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---HIAQGLRLYR-PHLASEKVY 235
Query: 244 DFLIKCFLKDPKRRWTAEMLLNHPFVCADDQT 275
+ C+ + R T ++LL++ D+++
Sbjct: 236 TIMYSCWHEKADERPTFKILLSNILDVMDEES 267
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HSKG +H D+K NV++ + ++ D+GLA+
Sbjct: 128 KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 187
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
+Q + R Y PE V+ Y+ D+W+LGC + M + + H QD
Sbjct: 188 YHP----AQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQD 243
Query: 216 SNVFSLLIRIG 226
+ + L+RI
Sbjct: 244 N--YDQLVRIA 252
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 118/298 (39%), Gaps = 66/298 (22%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN---EKEALDQIGICPQIV 65
IG G FGSV V + A+K SV +N E A +G +V
Sbjct: 17 IGSGEFGSV----FKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 66 RCFG----DDYSFEKGERFYNLLLEYASRGSLADRVKKQNN--GRLQESDVKRYTRSMLK 119
R F DD+ + E Y + GSLAD + + +E+++K + +
Sbjct: 73 RYFSAWAEDDHMLIQNE--------YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 120 GLRHIHSKGFVHCDIKLQNVLVF------------DNDE-------AKIADFGLAKKSSC 160
GLR+IHS VH DIK N+ + D D+ KI D G + S
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS- 183
Query: 161 DGERSQSFECRGTPLYMSPESVNENEYEAP-CDIWALGCAVVEMASGKP------AWNHK 213
S E G +++ E + EN P DI+AL VV A +P W+
Sbjct: 184 ----SPQVE-EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE- 237
Query: 214 QDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
IR G LP IP LS++ + L DP+RR +A L+ H + +
Sbjct: 238 ---------IRQG---RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 283
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HSKG +H D+K NV++ + ++ D+GLA+
Sbjct: 123 KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 182
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
+Q + R Y PE V+ Y+ D+W+LGC + M + + H QD
Sbjct: 183 YHP----AQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQD 238
Query: 216 SNVFSLLIRIG 226
+ + L+RI
Sbjct: 239 N--YDQLVRIA 247
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCAD---CPPSSVTLKNEKEALDQI-GICPQI 64
+G G FG V K ++ S ++ + V + E L Q+ G+C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK- 81
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R ++ EY + G L + +++ + R Q + + + + + ++
Sbjct: 82 -------------QRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYL 127
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
SK F+H D+ +N LV D K++DFGL+ + D E + S + + PE +
Sbjct: 128 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMY 186
Query: 185 NEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
+++ + DIWA G + E+ S GK + +S I G L P SE+
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---HIAQGLRLYR-PHLASEKVY 242
Query: 244 DFLIKCFLKDPKRRWTAEMLLNHPFVCADDQT 275
+ C+ + R T ++LL++ D+++
Sbjct: 243 TIMYSCWHEKADERPTFKILLSNILDVMDEES 274
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 118/298 (39%), Gaps = 66/298 (22%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKN---EKEALDQIGICPQIV 65
IG G FGSV V + A+K SV +N E A +G +V
Sbjct: 19 IGSGEFGSV----FKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 74
Query: 66 RCFG----DDYSFEKGERFYNLLLEYASRGSLADRVKKQNN--GRLQESDVKRYTRSMLK 119
R F DD+ + E Y + GSLAD + + +E+++K + +
Sbjct: 75 RYFSAWAEDDHMLIQNE--------YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 120 GLRHIHSKGFVHCDIKLQNVLVF------------DNDE-------AKIADFGLAKKSSC 160
GLR+IHS VH DIK N+ + D D+ KI D G + S
Sbjct: 127 GLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS- 185
Query: 161 DGERSQSFECRGTPLYMSPESVNENEYEAP-CDIWALGCAVVEMASGKP------AWNHK 213
S E G +++ E + EN P DI+AL VV A +P W+
Sbjct: 186 ----SPQVE-EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE- 239
Query: 214 QDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
IR G LP IP LS++ + L DP+RR +A L+ H + +
Sbjct: 240 ---------IRQG---RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC----- 61
D +G G F +V A+ + ++A+K S + AL +I +
Sbjct: 16 DFLGEGQFATVYKARDKNTNQ----IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 62 PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGL 121
P I+ D + + N+ L + + + + K N+ L S +K Y L+GL
Sbjct: 72 PNIIGLL-DAFGHKS-----NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 122 RHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPES 181
++H +H D+K N+L+ +N K+ADFGLA KS R+ + T Y +PE
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA-KSFGSPNRAYXHQVV-TRWYRAPEL 183
Query: 182 V-NENEYEAPCDIWALGCAVVEMASGKP 208
+ Y D+WA+GC + E+ P
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELLLRVP 211
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 8 VIGHGSFGSVN---LAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--P 62
+IGHG FG V L +KV+ + P SS ++ + ++ + C P
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALK----------RRTPESSQGIEEFETEIETLSFCRHP 95
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM--LKG 120
+V G + E+ E L+ +Y G+L + + + S +R + +G
Sbjct: 96 HLVSLIG--FCDERNEMI--LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L ++H++ +H D+K N+L+ +N KI DFG++KK + G+ +GT Y+ PE
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPE 211
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPA 209
+ D+++ G + E+ + A
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSA 240
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++ EY + G L + +++ + R Q + + + + + ++ SK F+H D+ +N LV
Sbjct: 96 IITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN 154
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVE 202
D K++DFGL+ + D E + S + + PE + +++ + DIWA G + E
Sbjct: 155 DQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 213
Query: 203 MAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAE 261
+ S GK + +S I G L P SE+ + C+ + R T +
Sbjct: 214 IYSLGKMPYERFTNSETAE---HIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFK 269
Query: 262 MLLNHPFVCADDQT 275
+LL++ D+++
Sbjct: 270 ILLSNILDVMDEES 283
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 195
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGK 207
Y +PE + Y+ D+W++GC + EM K
Sbjct: 196 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 31/275 (11%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVR 66
DV+GHG+ G++ + + + + + C V L E + P ++R
Sbjct: 30 DVLGHGAEGTI-VYRGMFDNRDVAVKRILPECFSFADREVQLLRESDE------HPNVIR 82
Query: 67 CFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHS 126
F EK +F + +E + +L + V++++ L + ++ GL H+HS
Sbjct: 83 YFCT----EKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTT-SGLAHLHS 136
Query: 127 KGFVHCDIKLQNVLV-----FDNDEAKIADFGLAKKSSCDGERSQSFECR----GTPLYM 177
VH D+K N+L+ +A I+DFGL KK + SF R GT ++
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG---RHSFSRRSGVPGTEGWI 193
Query: 178 SPESVNENEYEAP---CDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPN 233
+PE ++E+ E P DI++ GC + S G + LL + P
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE 253
Query: 234 IPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
D+ ++ + K DP++R +A+ +L HPF
Sbjct: 254 KHEDVI--ARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + + R
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR---Y 184
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGK 207
Y +PE + Y+ D+W++GC + EM K
Sbjct: 185 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 114/272 (41%), Gaps = 31/272 (11%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCAD---CPPSSVTLKNEKEALDQI-GICPQI 64
+G G FG V K ++ S ++ + V + E L Q+ G+C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK- 75
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R ++ EY + G L + +++ + R Q + + + + + ++
Sbjct: 76 -------------QRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYL 121
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCD---GERSQSFECRGTPLYMSPES 181
SK F+H D+ +N LV D K++DFGL++ D R F R +P PE
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP----PEV 177
Query: 182 VNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
+ +++ + DIWA G + E+ S GK + +S I G L P SE
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---HIAQGLRLYR-PHLASE 233
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPFVCAD 272
+ + C+ + R T ++LL++ D
Sbjct: 234 KVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 109 DVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
D+ Y+ + +G+ + S+ +H D+ +N+L+ +N+ KI DFGLA+ + + +
Sbjct: 200 DLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKG 259
Query: 169 ECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIG 226
+ R +M+PES+ + Y D+W+ G + E+ S G P + D + S L R G
Sbjct: 260 DTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRL-REG 318
Query: 227 VGDELPNIPGDLSEQGKDFLIKCFLKDPKRR 257
+ P + + ++ C+ +DPK R
Sbjct: 319 MRMRAPEYS---TPEIYQIMLDCWHRDPKER 346
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 79 RFYNLLLEYASRGSLADRVKK-QNNGR-LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKL 136
++ N+++EY +L +K +GR + + + Y + + + IHS G H DIK
Sbjct: 111 KYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKP 169
Query: 137 QNVLVFDNDEA-KIADFGLAKKSSCDGERSQSFECRGTPLYMSPE-SVNENEYEAPCDIW 194
QN+LV D K+ DFG AKK E S + C + Y +PE + EY D+W
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAKKL-IPSEPSVAXIC--SRFYRAPELMLGATEYTPSIDLW 226
Query: 195 ALGCAVVEMASGKPAWNHKQDSNVFSLLIRI 225
++GC E+ GKP ++ + + +I+I
Sbjct: 227 SIGCVFGELILGKPLFSGETSIDQLVRIIQI 257
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++ EY + G L + +++ + R Q + + + + + ++ SK F+H D+ +N LV
Sbjct: 76 IITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN 134
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVVE 202
D K++DFGL+ + D E + S + + PE + +++ + DIWA G + E
Sbjct: 135 DQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 193
Query: 203 MAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAE 261
+ S GK + +S I G L P SE+ + C+ + R T +
Sbjct: 194 IYSLGKMPYERFTNSETAE---HIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFK 249
Query: 262 MLLNHPFVCADDQT 275
+LL++ D+++
Sbjct: 250 ILLSNILDVMDEES 263
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 39/235 (16%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+IG GSFG V + +V E+ +A+K +KN+K L+Q I +++
Sbjct: 61 LIGKGSFGQV-VKAYDRVEQEW---VAIK----------IIKNKKAFLNQAQIEVRLLEL 106
Query: 68 FGDD-----YSFEKGERFYN------LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
Y +R + L+ E S +L D ++ N + + +++ +
Sbjct: 107 MNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 117 MLKGLRHIHSK--GFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCD-GER-SQSFEC 170
M L + + +HCD+K +N+L+ + + KI DFG SSC G+R Q +
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG----SSCQLGQRIYQXIQS 221
Query: 171 RGTPLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI 225
R Y SPE + Y+ D+W+LGC +VEM +G+P ++ + + + ++ +
Sbjct: 222 R---FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV 273
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+ G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 71
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 72 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 184
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 240
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSR 263
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 21/241 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 73
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+++ G L D V++ + + + +
Sbjct: 74 ASVDNPHVCRLLGICLT-----STVQLIMQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 127
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFG AK + E+ E P+
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIK 186
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQP 243
Query: 235 P 235
P
Sbjct: 244 P 244
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 225 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 279
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 280 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 335
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H ++ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 391
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 392 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 429
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 39/235 (16%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+IG GSFG V + +V E+ +A+K +KN+K L+Q I +++
Sbjct: 42 LIGKGSFGQV-VKAYDRVEQEW---VAIK----------IIKNKKAFLNQAQIEVRLLEL 87
Query: 68 FGDD-----YSFEKGERFYN------LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
Y +R + L+ E S +L D ++ N + + +++ +
Sbjct: 88 MNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQ 146
Query: 117 MLKGLRHIHSK--GFVHCDIKLQNVLVFDNDEA--KIADFGLAKKSSCD-GER-SQSFEC 170
M L + + +HCD+K +N+L+ + + KI DFG SSC G+R Q +
Sbjct: 147 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG----SSCQLGQRIYQXIQS 202
Query: 171 RGTPLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI 225
R Y SPE + Y+ D+W+LGC +VEM +G+P ++ + + + ++ +
Sbjct: 203 R---FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV 254
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 19/198 (9%)
Query: 74 FEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCD 133
FE+ + F +L L D + ++ G LQE + + +L+ +RH H+ G +H D
Sbjct: 125 FERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRD 182
Query: 134 IKLQNVLV-FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEA-PC 191
IK +N+L+ + E K+ DFG S + + + GT +Y PE + + Y
Sbjct: 183 IKDENILIDLNRGELKLIDFG----SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSA 238
Query: 192 DIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGKDFLIKCFL 251
+W+LG + +M G + H ++ + R V S + + + C
Sbjct: 239 AVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----------SSECQHLIRWCLA 287
Query: 252 KDPKRRWTAEMLLNHPFV 269
P R T E + NHP++
Sbjct: 288 LRPSDRPTFEEIQNHPWM 305
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+ G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 78
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 79 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 132
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFGLAK + E+ E P+
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIK 191
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 247
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSR 270
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NVL+ ++ + ++ D+GLA+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 228 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 282
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 283 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 338
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H ++ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 394
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 432
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 71
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 72 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 125
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFG AK + E+ E P+
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIK 184
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 240
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSR 263
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 22/263 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 78
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 79 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 132
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFG AK + E+ E P+
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIK 191
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQ- 247
Query: 235 PGDLSEQGKDFLIKCFLKDPKRR 257
P + ++KC++ D R
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSR 270
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 122 KQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 116 SMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL 175
ML G++H+HS G +H D+K N++V + KI DFGLA+ + R
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR---Y 190
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVEMASGK 207
Y +PE + Y+ D+W++GC + EM K
Sbjct: 191 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 39/235 (16%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
+IG GSFG V + +V E+ +A+K +KN+K L+Q I +++
Sbjct: 61 LIGKGSFGQV-VKAYDRVEQEW---VAIK----------IIKNKKAFLNQAQIEVRLLEL 106
Query: 68 FGDD-----YSFEKGERFYN------LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
Y +R + L+ E S +L D ++ N + + +++ +
Sbjct: 107 MNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 117 MLKGLRHIHSK--GFVHCDIKLQNVLVFD--NDEAKIADFGLAKKSSCD-GER-SQSFEC 170
M L + + +HCD+K +N+L+ + KI DFG SSC G+R Q +
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG----SSCQLGQRIYQXIQS 221
Query: 171 RGTPLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRI 225
R Y SPE + Y+ D+W+LGC +VEM +G+P ++ + + + ++ +
Sbjct: 222 R---FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV 273
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G +G V V ++ +AVK+ + E + +I P +V+
Sbjct: 267 LGGGQYGEV----YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLL 321
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + FY ++ E+ + G+L D +++ N + + + + ++ K
Sbjct: 322 G---VCTREPPFY-IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 377
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQS---FECRGTPLYMSPESVNEN 185
F+H ++ +N LV +N K+ADFGL++ + D + + F + T +PES+ N
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 433
Query: 186 EYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLL 222
++ D+WA G + E+A+ G + S V+ LL
Sbjct: 434 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 471
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 25/270 (9%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCAD---CPPSSVTLKNEKEALDQI-GICPQI 64
+G G FG V K ++ S ++ + V + E L Q+ G+C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK- 75
Query: 65 VRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHI 124
+R ++ EY + G L + +++ + R Q + + + + + ++
Sbjct: 76 -------------QRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYL 121
Query: 125 HSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNE 184
SK F+H D+ +N LV D K++DFGL+ + D E + S + + PE +
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMY 180
Query: 185 NEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSEQGK 243
+++ + DIWA G + E+ S GK + +S I G L P SE+
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE---HIAQGLRLYR-PHLASEKVY 236
Query: 244 DFLIKCFLKDPKRRWTAEMLLNHPFVCADD 273
+ C+ + R T ++LL++ D+
Sbjct: 237 TIMYSCWHEKADERPTFKILLSNILDVMDE 266
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 181 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 236
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 237 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 294
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 295 EALDFLDKLLRYDHQSRLTAREAMEHPY 322
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 181 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 236
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 237 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 294
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 295 EALDFLDKLLRYDHQSRLTAREAMEHPY 322
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECR------- 171
+ + +HSKG +H D+K N+ +D K+ DFGL D E
Sbjct: 175 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHX 234
Query: 172 ---GTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
GT LYMSPE ++ N Y DI++LG + E+
Sbjct: 235 GQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 120 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 180 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 235
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 236 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 293
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 294 EALDFLDKLLRYDHQSRLTAREAMEHPY 321
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 122/279 (43%), Gaps = 24/279 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + + +AVK + S L +E + L IG
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNG----RLQESDVKR------ 112
+V G + K +++E+ G+L+ ++ + N ++ D+ +
Sbjct: 92 NVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 113 ----YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + +
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 169 ECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
+ R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 269 RMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 127 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 186
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 187 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 242
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 243 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 300
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 301 EALDFLDKLLRYDHQSRLTAREAMEHPY 328
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 44/208 (21%)
Query: 99 KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKK 157
KQ L + D++ Y +LK L + HS G +H D+K NV++ ++ + ++ D+GLA+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 158 SSCDGERSQSFECRGTPLYMS-PE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQD 215
Q + R Y PE V+ Y+ D+W+LGC + M K + H D
Sbjct: 182 YHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 216 SNVFSLLIRIG--VGDE-------LPNIPGD--------------------------LSE 240
+ + L+RI +G E NI D +S
Sbjct: 238 N--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP 295
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ DFL K D + R TA + HP+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPY 323
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 119 KGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECR------- 171
+ + +HSKG +H D+K N+ +D K+ DFGL D E
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 172 ---GTPLYMSPESVNENEYEAPCDIWALGCAVVEM 203
GT LYMSPE ++ N Y DI++LG + E+
Sbjct: 189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + +AVK + S L +E + L IG
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNG----RLQESDVKR------ 112
+V G + K +++E+ G+L+ ++ + N ++ D+ +
Sbjct: 92 NVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 113 ----YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + +
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 169 ECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
+ R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 269 RMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 9/216 (4%)
Query: 9 IGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRCF 68
+G G+FGSV + + V + + E + + Q+ P IVR
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRLI 402
Query: 69 GDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKG 128
G + E L++E A G L + + + S+V + G++++ K
Sbjct: 403 G----VCQAEALM-LVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 129 FVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMSPESVNENEY 187
FVH ++ +NVL+ + AKI+DFGL+K D + PL + +PE +N ++
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 188 EAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLL 222
+ D+W+ G + E ++ G+ + + V + +
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 552
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + +AVK + S L +E + L IG
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNG----RLQESDVKR------ 112
+V G + K +++E+ G+L+ ++ + N ++ D+ +
Sbjct: 92 NVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148
Query: 113 ----YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + +
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 169 ECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
+ R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 269 RMRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + +AVK + S L +E + L IG
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNG----RLQESDVKR------ 112
+V G + K +++E+ G+L+ ++ + N ++ D+ +
Sbjct: 83 NVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 113 ----YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + +
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 169 ECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
+ R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 260 RMRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 125/292 (42%), Gaps = 46/292 (15%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G+GS G+V + + M + C D + L E + P ++R
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-DIALMEIKLLTESDD------HPNVIRY 74
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQN----NGRLQ-ESDVKRYTRSMLKGLR 122
Y E +RF + LE + +L D V+ +N N +LQ E + R + G+
Sbjct: 75 ----YCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 123 HIHSKGFVHCDIKLQNVLV-----FDNDEAK--------IADFGLAKK--SSCDGERSQS 167
H+HS +H D+K QN+LV F D+ I+DFGL KK S R+
Sbjct: 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189
Query: 168 FECRGTPLYMSPESVNEN-------EYEAPCDIWALGCAVVEMAS-GKPAWNHK--QDSN 217
GT + +PE + E+ DI+++GC + S GK + K ++SN
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 249
Query: 218 VFSLLIRIGVGDELPNIPG-DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ + + DE+ + L + D + + DP +R TA +L HP
Sbjct: 250 IIRGIFSL---DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 25/260 (9%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC-----P 62
VIG G FG V + K+ + +A+K+ S T K ++ L + I P
Sbjct: 14 VIGAGEFGEV-CSGHLKLPGKREIFVAIKTLK----SGYTEKQRRDFLSEASIMGQFDHP 68
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLR 122
++ G ++ E+ GSL D +QN+G+ + R + G++
Sbjct: 69 NVIHLEG----VVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMK 123
Query: 123 HIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAK---KSSCDGERSQSFECRGTPLYMSP 179
++ +VH + +N+LV N K++DFGL++ + D + + + + +P
Sbjct: 124 YLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 180 ESVNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPGD 237
E++ ++ + D+W+ G + E+ S +P W+ + + I LP P D
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINA----IEQDYRLPP-PMD 238
Query: 238 LSEQGKDFLIKCFLKDPKRR 257
++ C+ KD R
Sbjct: 239 CPSALHQLMLDCWQKDRNHR 258
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 42/288 (14%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G+GS G+V + + M + C D + L E + P ++R
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-DIALMEIKLLTESDD------HPNVIRY 92
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQN----NGRLQ-ESDVKRYTRSMLKGLR 122
Y E +RF + LE + +L D V+ +N N +LQ E + R + G+
Sbjct: 93 ----YCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 123 HIHSKGFVHCDIKLQNVLV-----FDNDEAK--------IADFGLAKK--SSCDGERSQS 167
H+HS +H D+K QN+LV F D+ I+DFGL KK S R
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 168 FECRGTPLYMSPESVNEN---EYEAPCDIWALGCAVVEMAS-GKPAWNHK--QDSNVFSL 221
GT + +PE + E+ DI+++GC + S GK + K ++SN+
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRG 267
Query: 222 LIRIGVGDELPNIPG-DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ + DE+ + L + D + + DP +R TA +L HP
Sbjct: 268 IFSL---DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 42/288 (14%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G+GS G+V + + M + C D + L E + P ++R
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-DIALMEIKLLTESDD------HPNVIRY 92
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQN----NGRLQ-ESDVKRYTRSMLKGLR 122
Y E +RF + LE + +L D V+ +N N +LQ E + R + G+
Sbjct: 93 ----YCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 123 HIHSKGFVHCDIKLQNVLV-----FDNDEAK--------IADFGLAKK--SSCDGERSQS 167
H+HS +H D+K QN+LV F D+ I+DFGL KK S R
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 168 FECRGTPLYMSPESVNEN---EYEAPCDIWALGCAVVEMAS-GKPAWNHK--QDSNVFSL 221
GT + +PE + E+ DI+++GC + S GK + K ++SN+
Sbjct: 208 NNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRG 267
Query: 222 LIRIGVGDELPNIPG-DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ + DE+ + L + D + + DP +R TA +L HP
Sbjct: 268 IFSL---DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 312
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 21/241 (8%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC 61
E+ + V+G G+FG+V + +A+K + + + K KE LD+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE----ATSPKANKEILDEAYVM 73
Query: 62 -----PQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRS 116
P + R G + L+ + G L D V++ + + + +
Sbjct: 74 ASVDNPHVCRLLGICLT-----STVQLITQLMPFGCLLDYVREHKDN-IGSQYLLNWCVQ 127
Query: 117 MLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL- 175
+ KG+ ++ + VH D+ +NVLV KI DFG AK + E+ E P+
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIK 186
Query: 176 YMSPESVNENEYEAPCDIWALGCAVVE-MASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+M+ ES+ Y D+W+ G V E M G ++ S + S+L + G+ LP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK---GERLPQP 243
Query: 235 P 235
P
Sbjct: 244 P 244
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 25/265 (9%)
Query: 2 EWLRGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNE-KEALDQIG 59
E LR IG GSFG V + + + + M + C + +NE + ++
Sbjct: 18 EILRA--IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--------RNEVRNVFKELQ 67
Query: 60 ICPQIVRCFGDD--YSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM 117
I + F + YSF+ E + ++++ G L R Q N +E VK + +
Sbjct: 68 IMQGLEHPFLVNLWYSFQDEEDMF-MVVDLLLGGDL--RYHLQQNVHFKEETVKLFICEL 124
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYM 177
+ L ++ ++ +H D+K N+L+ ++ I DF +A + +Q GT YM
Sbjct: 125 VMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA---AMLPRETQITTMAGTKPYM 181
Query: 178 SPESVNENE---YEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNI 234
+PE + + Y D W+LG E+ G+ ++ + S+ S I +
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR--SSTSSKEIVHTFETTVVTY 239
Query: 235 PGDLSEQGKDFLIKCFLKDPKRRWT 259
P S++ L K +P +R++
Sbjct: 240 PSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 120/271 (44%), Gaps = 23/271 (8%)
Query: 7 DVIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEA-LDQIGICPQIV 65
+++G G FG V + + +L+AVK + L+ + E + + + ++
Sbjct: 44 NILGRGGFGKVYKGRLAD-----GTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLL 98
Query: 66 RCFGDDYSFEKGERFYNLLLEYASRGSLAD--RVKKQNNGRLQESDVKRYTRSMLKGLRH 123
R G + ER L+ Y + GS+A R + ++ L +R +GL +
Sbjct: 99 RLRG--FCMTPTERL--LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 154
Query: 124 IHSK---GFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
+H +H D+K N+L+ + EA + DFGLAK + RGT +++PE
Sbjct: 155 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DXHVXXAVRGTIGHIAPE 213
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIRIGVGDELPNIPGDLSE 240
++ + D++ G ++E+ +G+ A++ + +N +++ L + G L E
Sbjct: 214 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML-------LDWVKGLLKE 266
Query: 241 QGKDFLIKCFLKDPKRRWTAEMLLNHPFVCA 271
+ + L+ L+ + E L+ +C
Sbjct: 267 KKLEALVDVDLQGNYKDEEVEQLIQVALLCT 297
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + +AVK + S L +E + L IG
Sbjct: 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNG----RLQESDVKR------ 112
+V G + K +++E+ G+L+ ++ + N ++ D+ +
Sbjct: 129 NVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 185
Query: 113 ----YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + +
Sbjct: 186 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 169 ECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
+ R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 305
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 306 RMRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 28/243 (11%)
Query: 1 MEWLRGDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSSVTLKNEKEA----- 54
+E++R IG G+FG V A+A + P +++AVK + + + ++EA
Sbjct: 49 IEYVRD--IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 55 ------LDQIGIC----PQIV----RCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQ 100
+ +G+C P + +GD F + + + S S RV
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 101 NNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKK-SS 159
L ++ R + G+ ++ + FVH D+ +N LV +N KIADFGL++ S
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 160 CDGERSQSFECRGTPL-YMSPESVNENEYEAPCDIWALGCAVVEMASG--KPAWNHKQDS 216
D ++ + P+ +M PES+ N Y D+WA G + E+ S +P + +
Sbjct: 227 ADYYKADGND--AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 284
Query: 217 NVF 219
++
Sbjct: 285 VIY 287
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++L Y G L + ++ + + + D+ + + KG++++ SK FVH D+ +N ++
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL---YMSPESVNENEYEAPCDIWALGCA 199
+ K+ADFGLA + D E G L +M+ ES+ ++ D+W+ G
Sbjct: 167 EKFTVKVADFGLA-RDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 225
Query: 200 VVE-MASGKPAWNHKQDSNVFSLLIRIGVGDEL 231
+ E M G P + D N F + + + G L
Sbjct: 226 LWELMTRGAPPY---PDVNTFDITVYLLQGRRL 255
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 118/279 (42%), Gaps = 24/279 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + +AVK + S L +E + L IG
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKR---------- 112
+V G + K +++E+ G+L+ ++ + N + +
Sbjct: 94 NVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE 150
Query: 113 ----YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + +
Sbjct: 151 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 169 ECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
+ R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 270
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 271 RMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++L Y G L + ++ + + + D+ + + KG++++ SK FVH D+ +N ++
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL---YMSPESVNENEYEAPCDIWALGCA 199
+ K+ADFGLA + D E G L +M+ ES+ ++ D+W+ G
Sbjct: 168 EKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 226
Query: 200 VVE-MASGKPAWNHKQDSNVFSLLIRIGVGDEL 231
+ E M G P + D N F + + + G L
Sbjct: 227 LWELMTRGAPPY---PDVNTFDITVYLLQGRRL 256
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++L Y G L + ++ + + + D+ + + KG++++ SK FVH D+ +N ++
Sbjct: 101 VVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 159
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL---YMSPESVNENEYEAPCDIWALGCA 199
+ K+ADFGLA + D E G L +M+ ES+ ++ D+W+ G
Sbjct: 160 EKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 218
Query: 200 VVE-MASGKPAWNHKQDSNVFSLLIRIGVGDEL 231
+ E M G P + D N F + + + G L
Sbjct: 219 LWELMTRGAPPY---PDVNTFDITVYLLQGRRL 248
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 24/279 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + +AVK + S L +E + L IG
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNG----RLQESDVKR------ 112
+V G + K ++ E+ G+L+ ++ + N ++ D+ +
Sbjct: 83 NVVNLLG---ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 113 ----YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + +
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 169 ECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
+ R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 260 RMRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++L Y G L + ++ + + + D+ + + KG++++ SK FVH D+ +N ++
Sbjct: 127 VVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 185
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL---YMSPESVNENEYEAPCDIWALGCA 199
+ K+ADFGLA + D E G L +M+ ES+ ++ D+W+ G
Sbjct: 186 EKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 244
Query: 200 VVE-MASGKPAWNHKQDSNVFSLLIRIGVGDEL 231
+ E M G P + D N F + + + G L
Sbjct: 245 LWELMTRGAPPY---PDVNTFDITVYLLQGRRL 274
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++L Y G L + ++ + + + D+ + + KG++++ SK FVH D+ +N ++
Sbjct: 104 VVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 162
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL---YMSPESVNENEYEAPCDIWALGCA 199
+ K+ADFGLA + D E G L +M+ ES+ ++ D+W+ G
Sbjct: 163 EKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 221
Query: 200 VVE-MASGKPAWNHKQDSNVFSLLIRIGVGDEL 231
+ E M G P + D N F + + + G L
Sbjct: 222 LWELMTRGAPPY---PDVNTFDITVYLLQGRRL 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++L Y G L + ++ + + + D+ + + KG++++ SK FVH D+ +N ++
Sbjct: 106 VVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 164
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL---YMSPESVNENEYEAPCDIWALGCA 199
+ K+ADFGLA + D E G L +M+ ES+ ++ D+W+ G
Sbjct: 165 EKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 223
Query: 200 VVE-MASGKPAWNHKQDSNVFSLLIRIGVGDEL 231
+ E M G P + D N F + + + G L
Sbjct: 224 LWELMTRGAPPY---PDVNTFDITVYLLQGRRL 253
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 23/278 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + + +AVK + S L +E + L IG
Sbjct: 33 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 92
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNN-------------GRLQESD 109
+V G + K +++E+ G+L+ ++ + N L
Sbjct: 93 NVVNLLG---ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 110 VKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFE 169
+ Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + + +
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 170 CRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGVG 228
R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 229 DELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 270 MRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++L Y G L + ++ + + + D+ + + KG++++ SK FVH D+ +N ++
Sbjct: 128 VVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 186
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL---YMSPESVNENEYEAPCDIWALGCA 199
+ K+ADFGLA + D E G L +M+ ES+ ++ D+W+ G
Sbjct: 187 EKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 245
Query: 200 VVE-MASGKPAWNHKQDSNVFSLLIRIGVGDEL 231
+ E M G P + D N F + + + G L
Sbjct: 246 LWELMTRGAPPY---PDVNTFDITVYLLQGRRL 275
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++L Y G L + ++ + + + D+ + + KG++++ SK FVH D+ +N ++
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 165
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL---YMSPESVNENEYEAPCDIWALGCA 199
+ K+ADFGLA + D E G L +M+ ES+ ++ D+W+ G
Sbjct: 166 EKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 224
Query: 200 VVE-MASGKPAWNHKQDSNVFSLLIRIGVGDEL 231
+ E M G P + D N F + + + G L
Sbjct: 225 LWELMTRGAPPY---PDVNTFDITVYLLQGRRL 254
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++L Y G L + ++ + + + D+ + + KG++++ SK FVH D+ +N ++
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL---YMSPESVNENEYEAPCDIWALGCA 199
+ K+ADFGLA + D E G L +M+ ES+ ++ D+W+ G
Sbjct: 167 EKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 225
Query: 200 VVE-MASGKPAWNHKQDSNVFSLLIRIGVGDEL 231
+ E M G P + D N F + + + G L
Sbjct: 226 LWELMTRGAPPY---PDVNTFDITVYLLQGRRL 255
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 116/261 (44%), Gaps = 18/261 (6%)
Query: 2 EWLRGDVIGHGSFGSV--NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
E R V+G G+FG+V + + + P + + + P ++V +E + +
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
P +VR G S L+ + G L + V + + + + + + K
Sbjct: 76 -HPHLVRLLGVCLS-----PTIQLVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAK 128
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMS 178
G+ ++ + VH D+ +NVLV + KI DFGLA+ D E+ + + P+ +M+
Sbjct: 129 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD-EKEYNADGGKMPIKWMA 187
Query: 179 PESVNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
E ++ ++ D+W+ G + E+ + GKP ++ + LL + G+ LP P
Sbjct: 188 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKP-YDGIPTREIPDLLEK---GERLPQ-PP 242
Query: 237 DLSEQGKDFLIKCFLKDPKRR 257
+ ++KC++ D R
Sbjct: 243 ICTIDVYMVMVKCWMIDADSR 263
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 83 LLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLVF 142
++L Y G L + ++ + + + D+ + + KG++++ SK FVH D+ +N ++
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 143 DNDEAKIADFGLAKKSSCDGERSQSFECRGTPL---YMSPESVNENEYEAPCDIWALGCA 199
+ K+ADFGLA + D E G L +M+ ES+ ++ D+W+ G
Sbjct: 168 EKFTVKVADFGLA-RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 226
Query: 200 VVE-MASGKPAWNHKQDSNVFSLLIRIGVGDEL 231
+ E M G P + D N F + + + G L
Sbjct: 227 LWELMTRGAPPY---PDVNTFDITVYLLQGRRL 256
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 83 LLLEYASRGSLADRVK-KQNNGRLQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV 141
L+ Y GSL DR+ L + + G+ +H +H DIK N+L+
Sbjct: 98 LVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILL 157
Query: 142 FDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPESVNENEYEAPCDIWALGCAVV 201
+ AKI+DFGLA+ S + GT Y +PE++ E DI++ G ++
Sbjct: 158 DEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLL 216
Query: 202 EMASGKPAWNHKQDSNVF 219
E+ +G PA + ++ +
Sbjct: 217 EIITGLPAVDEHREPQLL 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 24/279 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKV-SSEFPSLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + + +AVK + S L +E + L IG
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNG----RLQESDVKR------ 112
+V G + K ++ E+ G+L+ ++ + N ++ D+ +
Sbjct: 83 NVVNLLG---ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 113 ----YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + +
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 169 ECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
+ R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 260 RMRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 116/261 (44%), Gaps = 18/261 (6%)
Query: 2 EWLRGDVIGHGSFGSV--NLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIG 59
E R V+G G+FG+V + + + P + + + P ++V +E + +
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 60 ICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSMLK 119
P +VR G S L+ + G L + V + + + + + + K
Sbjct: 99 -HPHLVRLLGVCLS-----PTIQLVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIAK 151
Query: 120 GLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPL-YMS 178
G+ ++ + VH D+ +NVLV + KI DFGLA+ D E+ + + P+ +M+
Sbjct: 152 GMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD-EKEYNADGGKMPIKWMA 210
Query: 179 PESVNENEYEAPCDIWALGCAVVEMAS--GKPAWNHKQDSNVFSLLIRIGVGDELPNIPG 236
E ++ ++ D+W+ G + E+ + GKP ++ + LL + G+ LP P
Sbjct: 211 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKP-YDGIPTREIPDLLEK---GERLPQ-PP 265
Query: 237 DLSEQGKDFLIKCFLKDPKRR 257
+ ++KC++ D R
Sbjct: 266 ICTIDVYMVMVKCWMIDADSR 286
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 8 VIGHGSFGSVN---LAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGIC--P 62
+IGHG FG V L +KV+ + P SS ++ + ++ + C P
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALK----------RRTPESSQGIEEFETEIETLSFCRHP 95
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM--LKG 120
+V G + E+ E L+ +Y G+L + + + S +R + +G
Sbjct: 96 HLVSLIG--FCDERNEMI--LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 121 LRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSFECRGTPLYMSPE 180
L ++H++ +H D+K N+L+ +N KI DFG++KK + + +GT Y+ PE
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPE 211
Query: 181 SVNENEYEAPCDIWALGCAVVEMASGKPA 209
+ D+++ G + E+ + A
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSA 240
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 120/279 (43%), Gaps = 24/279 (8%)
Query: 6 GDVIGHGSFGSVNLAKASKVSSEFP-SLMAVKSCADCPPSS--VTLKNEKEALDQIGICP 62
G +G G+FG V A A + +AVK + S L +E + L IG
Sbjct: 23 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 63 QIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNG----RLQESDVKR------ 112
+V G + K ++ E+ G+L+ ++ + N ++ D+ +
Sbjct: 83 NVVNLLG---ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 113 ----YTRSMLKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKKSSCDGERSQSF 168
Y+ + KG+ + S+ +H D+ +N+L+ + + KI DFGLA+ D + +
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 169 ECRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMAS-GKPAWNHKQDSNVFSLLIRIGV 227
+ R +M+PE++ + Y D+W+ G + E+ S G + + F ++ G
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 228 GDELPNIPGDLSEQGKDFLIKCFLKDPKRRWTAEMLLNH 266
P+ + + ++ C+ +P +R T L+ H
Sbjct: 260 RMRAPDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 35/282 (12%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
V+G G+FG V A+ + S + A+K T+ +E L + +VR
Sbjct: 13 VLGQGAFGQVVKARNALDSRYY----AIKKIRHTEEKLSTILSEVXLLASLN-HQYVVRY 67
Query: 68 FGD----------DYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQESDVKRYTRSM 117
+ + +K + + EY +L D + +N + Q + R R +
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLF-IQXEYCENRTLYDLIHSENLNQ-QRDEYWRLFRQI 125
Query: 118 LKGLRHIHSKGFVHCDIKLQNVLVFDNDEAKIADFGLAKK------------SSCDGERS 165
L+ L +IHS+G +H ++K N+ + ++ KI DFGLAK + G
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 166 QSFECRGTPLYMSPESVN-ENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFSLLIR 224
GT Y++ E ++ Y D ++LG E P + N+ L
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERVNILKKLRS 243
Query: 225 IGVGDELPNIPGDLSEQGKDFLIKCFL-KDPKRRWTAEMLLN 265
+ + E P D + + +I+ + DP +R A LLN
Sbjct: 244 VSI--EFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 46/292 (15%)
Query: 8 VIGHGSFGSVNLAKASKVSSEFPSLMAVKSCADCPPSSVTLKNEKEALDQIGICPQIVRC 67
++G+GS G+V + + M + C D + L E + P ++R
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC-DIALMEIKLLTESDD------HPNVIRY 74
Query: 68 FGDDYSFEKGERFYNLLLEYASRGSLADRVKKQN----NGRLQ-ESDVKRYTRSMLKGLR 122
Y E +RF + LE + +L D V+ +N N +LQ E + R + G+
Sbjct: 75 ----YCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 123 HIHSKGFVHCDIKLQNVLV-----FDNDEAK--------IADFGLAKK--SSCDGERSQS 167
H+HS +H D+K QN+LV F D+ I+DFGL KK S R
Sbjct: 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 189
Query: 168 FECRGTPLYMSPESVNEN-------EYEAPCDIWALGCAVVEMAS-GKPAWNHK--QDSN 217
GT + +PE + E+ DI+++GC + S GK + K ++SN
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 249
Query: 218 VFSLLIRIGVGDELPNIPG-DLSEQGKDFLIKCFLKDPKRRWTAEMLLNHPF 268
+ + + DE+ + L + D + + DP +R TA +L HP
Sbjct: 250 IIRGIFSL---DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPL 298
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGE 163
L + D++ Y +LK L + HS+G +H D+K NV++ + + ++ D+GLA+ E
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 183
Query: 164 RSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDS------ 216
+ R + PE V+ +Y+ D+W+LGC M K + + D+
Sbjct: 184 YNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 240
Query: 217 ----------NVFSLLIRIGVGDELPNIPGD-----------------LSEQGKDFLIKC 249
NV+ RI + +L + G +S + DFL K
Sbjct: 241 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKL 300
Query: 250 FLKDPKRRWTAEMLLNHPF 268
D + R TA + HP+
Sbjct: 301 LRYDHQERLTALEAMTHPY 319
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGE 163
L + D++ Y +LK L + HS+G +H D+K NV++ + + ++ D+GLA+ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 164 RSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDS------ 216
+ R + PE V+ +Y+ D+W+LGC M K + + D+
Sbjct: 182 YNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 217 ----------NVFSLLIRIGVGDELPNIPGD-----------------LSEQGKDFLIKC 249
NV+ RI + +L + G +S + DFL K
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKL 298
Query: 250 FLKDPKRRWTAEMLLNHPF 268
D + R TA + HP+
Sbjct: 299 LRYDHQERLTALEAMTHPY 317
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGE 163
L + D++ Y +LK L + HS+G +H D+K NV++ + + ++ D+GLA+ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 164 RSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDS------ 216
+ R + PE V+ +Y+ D+W+LGC M K + + D+
Sbjct: 182 YNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 217 ----------NVFSLLIRIGVGDELPNIPGD-----------------LSEQGKDFLIKC 249
NV+ RI + +L + G +S + DFL K
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKL 298
Query: 250 FLKDPKRRWTAEMLLNHPF 268
D + R TA + HP+
Sbjct: 299 LRYDHQERLTALEAMTHPY 317
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGE 163
L + D++ Y +LK L + HS+G +H D+K NV++ + + ++ D+GLA+ E
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 182
Query: 164 RSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDS------ 216
+ R + PE V+ +Y+ D+W+LGC M K + + D+
Sbjct: 183 YNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239
Query: 217 ----------NVFSLLIRIGVGDELPNIPGD-----------------LSEQGKDFLIKC 249
NV+ RI + +L + G +S + DFL K
Sbjct: 240 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKL 299
Query: 250 FLKDPKRRWTAEMLLNHPF 268
D + R TA + HP+
Sbjct: 300 LRYDHQERLTALEAMTHPY 318
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGE 163
L + D++ Y +LK L + HS+G +H D+K NV++ + + ++ D+GLA+ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 164 RSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDS------ 216
+ R + PE V+ +Y+ D+W+LGC M K + + D+
Sbjct: 182 YNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 217 ----------NVFSLLIRIGVGDELPNIPGD-----------------LSEQGKDFLIKC 249
NV+ RI + +L + G +S + DFL K
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKL 298
Query: 250 FLKDPKRRWTAEMLLNHPF 268
D + R TA + HP+
Sbjct: 299 LRYDHQERLTALEAMTHPY 317
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGE 163
L + D++ Y +LK L + HS+G +H D+K NV++ + + ++ D+GLA+ E
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 182
Query: 164 RSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDS------ 216
+ R + PE V+ +Y+ D+W+LGC M K + + D+
Sbjct: 183 YNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239
Query: 217 ----------NVFSLLIRIGVGDELPNIPGD-----------------LSEQGKDFLIKC 249
NV+ RI + +L + G +S + DFL K
Sbjct: 240 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKL 299
Query: 250 FLKDPKRRWTAEMLLNHPF 268
D + R TA + HP+
Sbjct: 300 LRYDHQERLTALEAMTHPY 318
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 109/252 (43%), Gaps = 28/252 (11%)
Query: 2 EWLRGDVIGHGSFGSVNLA-KASKVSSEFPSLMAVKSCADCPPSS-------VTLKN--- 50
+W+ G IG G FG + LA +K + ++ V+ + P S V K+
Sbjct: 38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIK 97
Query: 51 ---EKEALDQIGICPQIVRCFGDDYSFEKGERFYNLLLEYASRGSLADRVKKQNNGRLQE 107
E++ LD +GI P +G + KG + +++E G ++ QN G ++
Sbjct: 98 KWIERKQLDYLGI-PLF---YGSGLTEFKGRSYRFMVME--RLGIDLQKISGQN-GTFKK 150
Query: 108 SDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDN-DEAKIADFGLAKKSSCDGERS 165
S V + ML L +IH +VH DIK N+L+ + N D+ +AD+GL+ + +G
Sbjct: 151 STVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHK 210
Query: 166 QSFE-----CRGTPLYMSPESVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDSNVFS 220
Q E GT + S ++ D+ LG ++ GK W V
Sbjct: 211 QYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270
Query: 221 LLIRIGVGDELP 232
+ + DELP
Sbjct: 271 QTAKTNLLDELP 282
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGE 163
L + D++ Y +LK L + HS+G +H D+K NV++ + + ++ D+GLA+ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 164 RSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDS------ 216
+ R + PE V+ +Y+ D+W+LGC M K + + D+
Sbjct: 182 YNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 217 ----------NVFSLLIRIGVGDELPNIPGD-----------------LSEQGKDFLIKC 249
NV+ RI + +L + G +S + DFL K
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKL 298
Query: 250 FLKDPKRRWTAEMLLNHPF 268
D + R TA + HP+
Sbjct: 299 LRYDHQERLTALEAMTHPY 317
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGE 163
L + D++ Y +LK L + HS+G +H D+K NV++ + + ++ D+GLA+ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 164 RSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDS------ 216
+ R + PE V+ +Y+ D+W+LGC M K + + D+
Sbjct: 182 YNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 217 ----------NVFSLLIRIGVGDELPNIPGD-----------------LSEQGKDFLIKC 249
NV+ RI + +L + G +S + DFL K
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKL 298
Query: 250 FLKDPKRRWTAEMLLNHPF 268
D + R TA + HP+
Sbjct: 299 LRYDHQERLTALEAMTHPY 317
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 38/199 (19%)
Query: 105 LQESDVKRYTRSMLKGLRHIHSKGFVHCDIKLQNVLV-FDNDEAKIADFGLAKKSSCDGE 163
L + D++ Y +LK L + HS+G +H D+K NV++ + + ++ D+GLA+ E
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 181
Query: 164 RSQSFECRGTPLYMSPE-SVNENEYEAPCDIWALGCAVVEMASGKPAWNHKQDS------ 216
+ R + PE V+ +Y+ D+W+LGC M K + + D+
Sbjct: 182 YNVRVASR---YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 217 ----------NVFSLLIRIGVGDELPNIPGD-----------------LSEQGKDFLIKC 249
NV+ RI + +L + G +S + DFL K
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKL 298
Query: 250 FLKDPKRRWTAEMLLNHPF 268
D + R TA + HP+
Sbjct: 299 LRYDHQERLTALEAMTHPY 317
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,610,954
Number of Sequences: 62578
Number of extensions: 408434
Number of successful extensions: 3307
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 709
Number of HSP's gapped (non-prelim): 1206
length of query: 366
length of database: 14,973,337
effective HSP length: 100
effective length of query: 266
effective length of database: 8,715,537
effective search space: 2318332842
effective search space used: 2318332842
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)