Query 017747
Match_columns 366
No_of_seqs 145 out of 597
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 04:17:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017747.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017747hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2efj_A 3,7-dimethylxanthine me 100.0 2.1E-98 7E-103 743.4 30.0 355 1-366 1-378 (384)
2 1m6e_X S-adenosyl-L-methionnin 100.0 2.2E-98 8E-103 737.8 25.5 348 1-366 1-357 (359)
3 3b5i_A S-adenosyl-L-methionine 100.0 1.7E-94 5.9E-99 714.4 26.7 359 1-364 1-374 (374)
4 3ccf_A Cyclopropane-fatty-acyl 99.6 2.4E-14 8.3E-19 134.3 15.8 251 7-365 24-277 (279)
5 2p35_A Trans-aconitate 2-methy 99.6 4.5E-14 1.5E-18 130.1 15.5 229 15-350 8-238 (259)
6 2yqz_A Hypothetical protein TT 99.4 2E-12 6.9E-17 119.0 14.4 220 49-366 38-262 (263)
7 3dtn_A Putative methyltransfer 99.4 2.5E-11 8.4E-16 110.2 17.4 168 49-294 43-214 (234)
8 3bus_A REBM, methyltransferase 99.2 1.4E-10 4.8E-15 107.6 15.2 196 50-343 61-256 (273)
9 3ujc_A Phosphoethanolamine N-m 99.2 2.1E-09 7.1E-14 98.7 21.7 152 50-295 55-207 (266)
10 3hem_A Cyclopropane-fatty-acyl 99.2 6.8E-10 2.3E-14 105.1 17.9 223 50-360 72-299 (302)
11 4gek_A TRNA (CMO5U34)-methyltr 99.1 2.5E-10 8.6E-15 107.1 12.5 165 49-288 69-239 (261)
12 3hnr_A Probable methyltransfer 99.1 1.3E-10 4.4E-15 104.3 10.0 161 50-298 45-205 (220)
13 3sm3_A SAM-dependent methyltra 99.1 5.4E-10 1.8E-14 100.6 13.5 177 49-297 29-210 (235)
14 2aot_A HMT, histamine N-methyl 99.1 1E-10 3.5E-15 110.5 8.5 159 50-291 52-218 (292)
15 3f4k_A Putative methyltransfer 99.1 1.5E-09 5E-14 99.7 14.8 211 50-366 46-257 (257)
16 3dli_A Methyltransferase; PSI- 99.1 1.3E-09 4.5E-14 99.5 13.9 144 49-295 40-185 (240)
17 3h2b_A SAM-dependent methyltra 99.1 3.8E-10 1.3E-14 100.1 9.6 142 51-295 42-183 (203)
18 4htf_A S-adenosylmethionine-de 99.1 8E-10 2.7E-14 103.5 12.1 168 48-297 66-235 (285)
19 1kpg_A CFA synthase;, cyclopro 99.1 8.2E-09 2.8E-13 96.6 18.6 162 50-294 64-228 (287)
20 2o57_A Putative sarcosine dime 99.1 2.4E-09 8.1E-14 100.7 14.8 153 49-294 81-234 (297)
21 4hg2_A Methyltransferase type 99.1 1.1E-09 3.8E-14 102.5 12.4 103 49-229 38-141 (257)
22 3kkz_A Uncharacterized protein 99.0 5.1E-09 1.7E-13 97.1 15.7 210 49-365 45-256 (267)
23 3mgg_A Methyltransferase; NYSG 99.0 2.9E-09 9.8E-14 99.0 13.8 166 49-298 36-202 (276)
24 3ou2_A SAM-dependent methyltra 99.0 4E-09 1.4E-13 93.9 13.7 157 50-293 46-204 (218)
25 3ege_A Putative methyltransfer 99.0 1.6E-09 5.4E-14 100.5 10.5 194 49-346 33-231 (261)
26 1vl5_A Unknown conserved prote 99.0 1.4E-09 4.9E-14 100.3 9.8 156 50-297 37-193 (260)
27 1xxl_A YCGJ protein; structura 99.0 2E-09 6.8E-14 98.5 9.5 157 49-297 20-177 (239)
28 3lcc_A Putative methyl chlorid 98.9 1.1E-08 3.9E-13 92.8 13.3 143 51-297 67-210 (235)
29 1nkv_A Hypothetical protein YJ 98.9 5.3E-09 1.8E-13 95.8 11.2 149 50-292 36-185 (256)
30 2p7i_A Hypothetical protein; p 98.9 4E-09 1.4E-13 95.4 10.1 154 50-295 42-200 (250)
31 3l8d_A Methyltransferase; stru 98.9 2E-08 7E-13 91.0 14.8 150 49-295 52-201 (242)
32 1xtp_A LMAJ004091AAA; SGPP, st 98.9 7.3E-09 2.5E-13 94.7 11.4 144 50-293 93-237 (254)
33 2qe6_A Uncharacterized protein 98.9 2.2E-08 7.5E-13 94.3 14.8 159 50-301 77-250 (274)
34 1pjz_A Thiopurine S-methyltran 98.9 3.7E-09 1.3E-13 94.7 9.0 151 49-295 21-177 (203)
35 3bkx_A SAM-dependent methyltra 98.9 8.5E-08 2.9E-12 88.8 18.6 168 50-294 43-219 (275)
36 3dh0_A SAM dependent methyltra 98.9 2.5E-08 8.4E-13 89.2 14.2 145 49-294 36-181 (219)
37 2fk8_A Methoxy mycolic acid sy 98.9 7.9E-08 2.7E-12 91.4 18.4 162 50-294 90-254 (318)
38 3dlc_A Putative S-adenosyl-L-m 98.9 6.9E-09 2.4E-13 92.1 10.0 159 50-292 43-201 (219)
39 3bgv_A MRNA CAP guanine-N7 met 98.9 4.9E-09 1.7E-13 99.8 9.6 171 50-294 34-232 (313)
40 2g72_A Phenylethanolamine N-me 98.8 5E-09 1.7E-13 98.5 8.4 90 143-297 170-259 (289)
41 3e23_A Uncharacterized protein 98.8 9.9E-09 3.4E-13 91.5 9.7 141 50-295 43-183 (211)
42 1ri5_A MRNA capping enzyme; me 98.8 2.7E-08 9.2E-13 92.9 12.9 166 49-294 63-250 (298)
43 3g5t_A Trans-aconitate 3-methy 98.8 1.6E-08 5.5E-13 95.4 11.2 208 50-340 36-271 (299)
44 3vc1_A Geranyl diphosphate 2-C 98.8 8.9E-09 3E-13 98.0 9.1 153 50-294 117-269 (312)
45 2a14_A Indolethylamine N-methy 98.8 1.5E-08 5.1E-13 94.3 10.4 86 145-295 154-239 (263)
46 1y8c_A S-adenosylmethionine-de 98.8 1.2E-08 4.2E-13 92.2 8.9 109 49-226 36-145 (246)
47 3g5l_A Putative S-adenosylmeth 98.8 2.9E-08 9.8E-13 91.0 11.4 164 50-294 44-216 (253)
48 3g2m_A PCZA361.24; SAM-depende 98.8 3.5E-09 1.2E-13 100.1 5.2 177 50-296 82-276 (299)
49 3giw_A Protein of unknown func 98.8 4.5E-08 1.5E-12 92.6 12.7 165 50-302 78-256 (277)
50 3i53_A O-methyltransferase; CO 98.8 1.5E-07 5.1E-12 90.3 16.1 151 50-292 169-319 (332)
51 3pfg_A N-methyltransferase; N, 98.8 1.5E-08 5.2E-13 93.5 8.9 105 49-226 49-154 (263)
52 3reo_A (ISO)eugenol O-methyltr 98.8 2.2E-07 7.5E-12 90.9 17.6 153 49-293 202-354 (368)
53 3ocj_A Putative exported prote 98.8 8.9E-08 3E-12 90.8 14.0 167 49-293 117-290 (305)
54 2ex4_A Adrenal gland protein A 98.8 1.9E-08 6.5E-13 91.7 9.0 147 50-294 79-225 (241)
55 3lst_A CALO1 methyltransferase 98.8 1.1E-07 3.9E-12 92.0 14.9 153 49-293 183-335 (348)
56 2gb4_A Thiopurine S-methyltran 98.7 1.3E-07 4.4E-12 88.1 14.3 152 50-295 68-228 (252)
57 3cc8_A Putative methyltransfer 98.7 7.9E-08 2.7E-12 85.8 12.4 154 50-297 32-188 (230)
58 3e8s_A Putative SAM dependent 98.7 5.5E-08 1.9E-12 86.7 11.2 156 50-293 52-208 (227)
59 3p9c_A Caffeic acid O-methyltr 98.7 2.3E-07 7.9E-12 90.7 16.3 152 50-294 201-353 (364)
60 1vlm_A SAM-dependent methyltra 98.7 3E-07 1E-11 82.6 15.7 97 137-294 92-188 (219)
61 2ip2_A Probable phenazine-spec 98.7 1.3E-06 4.3E-11 83.6 20.8 152 52-292 169-320 (334)
62 3dp7_A SAM-dependent methyltra 98.7 1.6E-07 5.3E-12 91.7 14.1 160 50-292 179-340 (363)
63 2gs9_A Hypothetical protein TT 98.7 2.4E-07 8.3E-12 82.3 14.2 134 50-281 36-170 (211)
64 3gwz_A MMCR; methyltransferase 98.7 6.7E-07 2.3E-11 87.4 18.3 154 49-292 201-354 (369)
65 2kw5_A SLR1183 protein; struct 98.7 9.4E-08 3.2E-12 84.4 10.1 144 53-298 32-175 (202)
66 2i62_A Nicotinamide N-methyltr 98.7 1.4E-07 4.8E-12 86.4 11.6 163 50-297 56-242 (265)
67 4fsd_A Arsenic methyltransfera 98.6 2.7E-07 9.3E-12 90.6 13.8 118 50-228 83-208 (383)
68 2vdw_A Vaccinia virus capping 98.6 7.9E-08 2.7E-12 91.9 9.4 181 50-295 48-247 (302)
69 3jwg_A HEN1, methyltransferase 98.6 2.3E-07 7.7E-12 83.1 11.9 113 50-223 29-141 (219)
70 3cgg_A SAM-dependent methyltra 98.6 1.9E-07 6.5E-12 81.0 11.1 128 49-292 45-173 (195)
71 3jwh_A HEN1; methyltransferase 98.6 1.7E-07 5.8E-12 83.9 11.0 110 50-223 29-141 (217)
72 3bkw_A MLL3908 protein, S-aden 98.6 1.6E-07 5.4E-12 85.0 10.9 169 50-294 43-214 (243)
73 3mcz_A O-methyltransferase; ad 98.6 5.8E-07 2E-11 86.6 15.3 155 51-290 180-335 (352)
74 4a6d_A Hydroxyindole O-methylt 98.6 9.8E-07 3.4E-11 85.8 16.6 154 50-292 179-332 (353)
75 3ofk_A Nodulation protein S; N 98.6 1.4E-07 4.7E-12 84.2 9.0 107 49-226 50-157 (216)
76 4e2x_A TCAB9; kijanose, tetron 98.6 5.1E-08 1.8E-12 96.4 6.8 147 50-295 107-254 (416)
77 2r3s_A Uncharacterized protein 98.6 3.1E-07 1.1E-11 87.6 12.1 158 49-292 164-321 (335)
78 1x19_A CRTF-related protein; m 98.6 5.1E-07 1.7E-11 87.6 12.7 159 49-293 189-347 (359)
79 1fp1_D Isoliquiritigenin 2'-O- 98.5 1.3E-06 4.5E-11 85.2 15.6 149 49-293 208-359 (372)
80 2avn_A Ubiquinone/menaquinone 98.5 7.9E-08 2.7E-12 88.8 6.3 156 50-295 54-214 (260)
81 1qzz_A RDMB, aclacinomycin-10- 98.5 4.8E-07 1.6E-11 87.9 12.2 158 49-295 181-340 (374)
82 3ggd_A SAM-dependent methyltra 98.5 3.4E-07 1.2E-11 83.4 9.8 157 50-294 56-219 (245)
83 2zfu_A Nucleomethylin, cerebra 98.5 1.3E-06 4.5E-11 77.8 13.1 111 50-292 67-177 (215)
84 1tw3_A COMT, carminomycin 4-O- 98.5 1.1E-06 3.8E-11 84.9 13.2 157 50-295 183-340 (360)
85 3thr_A Glycine N-methyltransfe 98.5 1.9E-07 6.3E-12 87.4 7.4 117 50-225 57-177 (293)
86 3gu3_A Methyltransferase; alph 98.5 6.5E-07 2.2E-11 83.9 11.1 106 49-225 21-128 (284)
87 3i9f_A Putative type 11 methyl 98.5 1.3E-06 4.4E-11 74.9 11.8 132 49-293 16-147 (170)
88 3g07_A 7SK snRNA methylphospha 98.5 2.6E-07 8.8E-12 87.4 7.8 48 143-223 173-220 (292)
89 2xvm_A Tellurite resistance pr 98.4 6.4E-07 2.2E-11 78.3 9.4 140 50-293 32-172 (199)
90 3m70_A Tellurite resistance pr 98.4 4.4E-07 1.5E-11 84.7 8.5 139 50-292 120-258 (286)
91 2p8j_A S-adenosylmethionine-de 98.4 5.7E-07 2E-11 79.5 7.8 156 49-288 22-177 (209)
92 1fp2_A Isoflavone O-methyltran 98.4 7.1E-06 2.4E-10 79.3 16.0 150 50-293 188-340 (352)
93 3bxo_A N,N-dimethyltransferase 98.4 1.2E-06 4.1E-11 78.9 9.8 106 49-227 39-145 (239)
94 1zg3_A Isoflavanone 4'-O-methy 98.4 5E-06 1.7E-10 80.5 14.2 151 50-293 193-346 (358)
95 3opn_A Putative hemolysin; str 98.3 5.6E-07 1.9E-11 82.7 6.8 149 49-294 36-184 (232)
96 4df3_A Fibrillarin-like rRNA/T 98.3 3.1E-06 1.1E-10 78.1 11.4 107 51-226 78-185 (233)
97 1yzh_A TRNA (guanine-N(7)-)-me 98.3 3E-06 1E-10 75.8 11.0 165 51-291 42-210 (214)
98 1ve3_A Hypothetical protein PH 98.3 6.1E-07 2.1E-11 80.2 5.5 108 50-226 38-145 (227)
99 2ld4_A Anamorsin; methyltransf 98.3 4E-06 1.4E-10 72.4 10.3 71 143-289 59-130 (176)
100 3q87_B N6 adenine specific DNA 98.3 4.1E-06 1.4E-10 72.6 10.4 73 50-164 23-95 (170)
101 3grz_A L11 mtase, ribosomal pr 98.2 2E-06 6.8E-11 76.2 7.9 103 50-226 60-162 (205)
102 1wzn_A SAM-dependent methyltra 98.2 3.2E-06 1.1E-10 77.0 9.2 106 50-225 41-147 (252)
103 3dxy_A TRNA (guanine-N(7)-)-me 98.2 8.5E-07 2.9E-11 80.5 4.9 137 23-223 3-150 (218)
104 3mq2_A 16S rRNA methyltransfer 98.2 2.3E-06 7.9E-11 76.5 7.4 159 50-296 27-186 (218)
105 3iv6_A Putative Zn-dependent a 98.2 2.2E-06 7.5E-11 80.4 7.1 100 50-224 45-149 (261)
106 2pxx_A Uncharacterized protein 98.2 4.9E-06 1.7E-10 73.3 8.8 123 49-227 41-163 (215)
107 3m33_A Uncharacterized protein 98.1 4.9E-06 1.7E-10 75.1 8.1 70 49-154 47-118 (226)
108 2plw_A Ribosomal RNA methyltra 98.1 6.3E-06 2.1E-10 72.4 8.6 56 143-226 102-157 (201)
109 1ej0_A FTSJ; methyltransferase 98.1 1E-05 3.5E-10 68.4 9.2 111 50-227 22-140 (180)
110 3hp7_A Hemolysin, putative; st 98.1 6.9E-06 2.4E-10 78.2 8.9 144 50-293 85-231 (291)
111 3d2l_A SAM-dependent methyltra 98.1 5.9E-06 2E-10 74.5 7.9 106 51-226 34-140 (243)
112 3dmg_A Probable ribosomal RNA 98.1 6.9E-06 2.4E-10 81.0 8.0 108 50-223 233-340 (381)
113 1zx0_A Guanidinoacetate N-meth 98.0 7.3E-06 2.5E-10 74.4 7.3 107 50-223 60-170 (236)
114 3mti_A RRNA methylase; SAM-dep 98.0 1.2E-05 4E-10 69.9 8.2 115 49-225 21-137 (185)
115 3lbf_A Protein-L-isoaspartate 98.0 5.3E-06 1.8E-10 73.5 6.0 99 50-225 77-176 (210)
116 3sso_A Methyltransferase; macr 98.0 3.3E-05 1.1E-09 76.7 12.0 125 49-250 215-357 (419)
117 3e05_A Precorrin-6Y C5,15-meth 98.0 1.4E-05 4.7E-10 70.7 8.4 103 50-224 40-143 (204)
118 3hm2_A Precorrin-6Y C5,15-meth 98.0 9.9E-06 3.4E-10 69.4 7.1 104 50-226 25-130 (178)
119 3p2e_A 16S rRNA methylase; met 98.0 1.5E-05 5.1E-10 72.6 7.9 71 202-297 118-188 (225)
120 2fca_A TRNA (guanine-N(7)-)-me 98.0 1.2E-05 3.9E-10 72.4 7.0 112 51-223 39-153 (213)
121 3eey_A Putative rRNA methylase 98.0 3E-05 1E-09 67.9 9.4 118 50-225 22-141 (197)
122 1dus_A MJ0882; hypothetical pr 97.9 6.9E-06 2.3E-10 70.9 4.8 107 50-227 52-161 (194)
123 3q7e_A Protein arginine N-meth 97.9 1.6E-05 5.6E-10 77.0 7.7 106 50-221 66-171 (349)
124 3r0q_C Probable protein argini 97.9 1.2E-05 4E-10 78.9 6.6 108 49-223 62-169 (376)
125 1af7_A Chemotaxis receptor met 97.9 1.7E-05 5.7E-10 74.8 7.4 124 50-221 105-250 (274)
126 2nxc_A L11 mtase, ribosomal pr 97.9 1.5E-05 5.1E-10 73.7 6.5 100 50-224 120-219 (254)
127 1p91_A Ribosomal RNA large sub 97.9 1.7E-05 5.7E-10 73.2 6.7 98 50-227 85-182 (269)
128 3ckk_A TRNA (guanine-N(7)-)-me 97.9 3.3E-05 1.1E-09 70.8 8.5 122 50-223 46-168 (235)
129 2nyu_A Putative ribosomal RNA 97.9 4.9E-05 1.7E-09 66.2 9.2 118 50-226 22-148 (196)
130 2yxe_A Protein-L-isoaspartate 97.9 2.4E-05 8.2E-10 69.5 7.2 83 50-161 77-160 (215)
131 4dzr_A Protein-(glutamine-N5) 97.8 1.3E-05 4.3E-10 70.5 5.1 133 49-225 29-166 (215)
132 3id6_C Fibrillarin-like rRNA/T 97.8 6.3E-06 2.1E-10 75.9 3.1 63 17-101 50-112 (232)
133 2b3t_A Protein methyltransfera 97.8 9.4E-05 3.2E-09 68.8 11.2 125 50-222 109-237 (276)
134 1vbf_A 231AA long hypothetical 97.8 1.9E-05 6.6E-10 70.9 6.2 77 50-160 70-147 (231)
135 3fzg_A 16S rRNA methylase; met 97.8 4.4E-06 1.5E-10 75.0 1.6 102 34-167 34-135 (200)
136 3orh_A Guanidinoacetate N-meth 97.8 4.4E-05 1.5E-09 69.7 8.3 108 49-222 59-169 (236)
137 4dcm_A Ribosomal RNA large sub 97.8 1.2E-05 4.2E-10 78.9 4.7 111 51-223 223-334 (375)
138 3p9n_A Possible methyltransfer 97.8 9E-05 3.1E-09 64.6 9.7 110 50-228 44-158 (189)
139 2pjd_A Ribosomal RNA small sub 97.7 7.1E-06 2.4E-10 79.3 1.9 108 51-224 197-304 (343)
140 2pbf_A Protein-L-isoaspartate 97.7 1.9E-05 6.4E-10 70.9 4.4 87 50-160 80-175 (227)
141 1nt2_A Fibrillarin-like PRE-rR 97.7 0.0001 3.6E-09 66.1 9.4 36 50-101 57-92 (210)
142 3bwc_A Spermidine synthase; SA 97.7 0.00014 4.8E-09 69.1 9.9 114 49-223 94-210 (304)
143 1i1n_A Protein-L-isoaspartate 97.7 0.0001 3.4E-09 66.0 8.3 87 50-159 77-163 (226)
144 1dl5_A Protein-L-isoaspartate 97.7 3.5E-05 1.2E-09 73.5 5.3 82 50-160 75-157 (317)
145 3gdh_A Trimethylguanosine synt 97.7 6.5E-06 2.2E-10 74.7 0.0 84 50-165 78-162 (241)
146 1jsx_A Glucose-inhibited divis 97.7 8.1E-05 2.8E-09 65.5 7.1 100 51-223 66-165 (207)
147 1r18_A Protein-L-isoaspartate( 97.7 8.7E-05 3E-09 66.8 7.4 92 50-160 84-176 (227)
148 1o9g_A RRNA methyltransferase; 97.6 0.00018 6.1E-09 65.8 9.4 43 50-106 51-93 (250)
149 3adn_A Spermidine synthase; am 97.6 0.00021 7.1E-09 67.9 9.9 119 49-225 82-200 (294)
150 3lpm_A Putative methyltransfer 97.6 7E-05 2.4E-09 69.0 6.4 125 50-223 49-176 (259)
151 3uwp_A Histone-lysine N-methyl 97.6 6.3E-05 2.1E-09 74.9 6.4 112 50-222 173-287 (438)
152 2fyt_A Protein arginine N-meth 97.6 0.0004 1.4E-08 67.0 12.0 104 50-220 64-168 (340)
153 3evz_A Methyltransferase; NYSG 97.6 0.00012 4.2E-09 65.5 7.8 126 49-225 54-181 (230)
154 2yxd_A Probable cobalt-precorr 97.6 5.7E-05 1.9E-09 64.5 5.2 75 50-156 35-109 (183)
155 2ozv_A Hypothetical protein AT 97.6 0.0001 3.5E-09 68.3 7.2 126 50-223 36-170 (260)
156 3mb5_A SAM-dependent methyltra 97.6 0.00016 5.3E-09 66.0 8.2 76 50-153 93-168 (255)
157 3htx_A HEN1; HEN1, small RNA m 97.6 0.00015 5.1E-09 77.7 9.0 116 50-226 721-837 (950)
158 1jg1_A PIMT;, protein-L-isoasp 97.6 6.1E-05 2.1E-09 68.2 5.2 80 50-160 91-171 (235)
159 3gjy_A Spermidine synthase; AP 97.6 7.6E-05 2.6E-09 71.8 6.1 115 49-226 88-203 (317)
160 1xdz_A Methyltransferase GIDB; 97.6 7.1E-05 2.4E-09 68.1 5.5 100 50-222 70-173 (240)
161 1g6q_1 HnRNP arginine N-methyl 97.5 0.0002 6.7E-09 68.7 8.3 104 51-221 39-143 (328)
162 1ixk_A Methyltransferase; open 97.5 0.00016 5.6E-09 69.0 7.7 128 50-226 118-249 (315)
163 1uir_A Polyamine aminopropyltr 97.5 0.00015 5.1E-09 69.3 7.2 119 49-225 76-197 (314)
164 2ipx_A RRNA 2'-O-methyltransfe 97.5 0.00028 9.5E-09 63.7 8.6 36 50-100 77-112 (233)
165 1fbn_A MJ fibrillarin homologu 97.5 0.0003 1E-08 63.4 8.7 36 50-101 74-109 (230)
166 2b25_A Hypothetical protein; s 97.5 8.9E-05 3E-09 71.0 5.2 36 50-100 105-140 (336)
167 3tfw_A Putative O-methyltransf 97.5 0.00018 6E-09 66.1 6.8 37 50-101 63-99 (248)
168 2ift_A Putative methylase HI07 97.4 4.3E-05 1.5E-09 67.9 2.5 79 51-158 54-136 (201)
169 2h00_A Methyltransferase 10 do 97.4 0.00043 1.5E-08 63.2 9.0 86 50-161 65-154 (254)
170 1i9g_A Hypothetical protein RV 97.4 0.00023 7.8E-09 65.8 7.1 79 50-153 99-177 (280)
171 1yb2_A Hypothetical protein TA 97.4 0.00023 7.9E-09 66.1 7.1 75 50-153 110-185 (275)
172 3dou_A Ribosomal RNA large sub 97.4 0.00034 1.2E-08 61.9 7.8 26 201-226 117-142 (191)
173 3u81_A Catechol O-methyltransf 97.4 8.9E-05 3E-09 66.5 4.1 37 50-101 58-94 (221)
174 1ws6_A Methyltransferase; stru 97.4 8.2E-05 2.8E-09 63.0 3.3 18 50-67 41-58 (171)
175 3fpf_A Mtnas, putative unchara 97.4 0.00019 6.6E-09 68.4 6.0 102 49-223 121-222 (298)
176 1inl_A Spermidine synthase; be 97.4 0.00035 1.2E-08 66.1 7.6 115 49-223 89-205 (296)
177 2bm8_A Cephalosporin hydroxyla 97.4 0.00072 2.5E-08 61.7 9.5 39 51-101 82-120 (236)
178 3njr_A Precorrin-6Y methylase; 97.4 0.00046 1.6E-08 61.4 8.0 101 50-225 55-156 (204)
179 1xj5_A Spermidine synthase 1; 97.4 0.0004 1.4E-08 67.1 8.1 114 49-223 119-235 (334)
180 2gpy_A O-methyltransferase; st 97.3 0.0004 1.4E-08 62.5 7.7 102 51-223 55-160 (233)
181 2esr_A Methyltransferase; stru 97.3 0.00021 7.2E-09 61.3 5.4 35 50-101 31-65 (177)
182 1u2z_A Histone-lysine N-methyl 97.3 0.00049 1.7E-08 68.9 8.7 36 50-101 242-277 (433)
183 4hc4_A Protein arginine N-meth 97.3 0.001 3.4E-08 65.4 10.5 135 17-221 51-187 (376)
184 1g8a_A Fibrillarin-like PRE-rR 97.3 0.00079 2.7E-08 60.2 9.1 36 50-100 73-108 (227)
185 1o54_A SAM-dependent O-methylt 97.3 0.00037 1.3E-08 64.6 7.1 76 50-153 112-187 (277)
186 2fpo_A Methylase YHHF; structu 97.3 0.00037 1.3E-08 61.8 6.7 77 51-158 55-133 (202)
187 2pwy_A TRNA (adenine-N(1)-)-me 97.3 0.00033 1.1E-08 63.6 6.4 76 50-153 96-172 (258)
188 1l3i_A Precorrin-6Y methyltran 97.3 0.0001 3.5E-09 63.3 2.8 101 50-224 33-135 (192)
189 3r3h_A O-methyltransferase, SA 97.3 0.00087 3E-08 61.4 9.2 38 50-102 60-97 (242)
190 2xyq_A Putative 2'-O-methyl tr 97.3 0.00069 2.4E-08 64.3 8.6 109 50-226 63-174 (290)
191 3g89_A Ribosomal RNA small sub 97.3 0.00036 1.2E-08 64.4 6.3 101 50-223 80-184 (249)
192 1iy9_A Spermidine synthase; ro 97.3 0.00059 2E-08 63.9 7.9 114 49-223 74-189 (275)
193 3dr5_A Putative O-methyltransf 97.2 0.00025 8.4E-09 64.2 5.0 103 52-223 58-163 (221)
194 2o07_A Spermidine synthase; st 97.2 0.00052 1.8E-08 65.3 7.1 116 49-225 94-211 (304)
195 2frx_A Hypothetical protein YE 97.2 0.00068 2.3E-08 68.7 8.3 128 50-226 117-249 (479)
196 2wa2_A Non-structural protein 97.2 0.00086 3E-08 63.0 8.4 112 50-225 82-195 (276)
197 2vdv_E TRNA (guanine-N(7)-)-me 97.2 0.00066 2.2E-08 61.9 7.3 122 50-223 49-173 (246)
198 2i7c_A Spermidine synthase; tr 97.2 0.00064 2.2E-08 63.9 7.3 115 49-224 77-193 (283)
199 2oxt_A Nucleoside-2'-O-methylt 97.2 0.00088 3E-08 62.5 7.9 112 50-225 74-187 (265)
200 3duw_A OMT, O-methyltransferas 97.2 0.00044 1.5E-08 61.6 5.6 37 50-101 58-94 (223)
201 1sqg_A SUN protein, FMU protei 97.1 0.00039 1.3E-08 69.2 5.0 126 51-226 247-377 (429)
202 2pt6_A Spermidine synthase; tr 97.1 0.00086 3E-08 64.3 7.2 114 49-223 115-230 (321)
203 3tma_A Methyltransferase; thum 97.1 0.0011 3.8E-08 63.9 8.1 116 50-224 203-318 (354)
204 2b2c_A Spermidine synthase; be 97.1 0.0008 2.8E-08 64.4 6.9 114 49-223 107-222 (314)
205 2y1w_A Histone-arginine methyl 97.1 0.00097 3.3E-08 64.4 7.4 77 50-158 50-127 (348)
206 3ajd_A Putative methyltransfer 97.1 0.0003 1E-08 65.6 3.6 124 50-226 83-214 (274)
207 3tr6_A O-methyltransferase; ce 97.0 0.00096 3.3E-08 59.4 6.6 37 50-101 64-100 (225)
208 2p41_A Type II methyltransfera 97.0 0.0012 4E-08 63.0 7.4 22 205-226 173-194 (305)
209 2hnk_A SAM-dependent O-methylt 97.0 0.0024 8.1E-08 57.7 9.1 36 50-100 60-95 (239)
210 3m6w_A RRNA methylase; rRNA me 97.0 0.00035 1.2E-08 70.5 3.8 128 50-226 101-232 (464)
211 1mjf_A Spermidine synthase; sp 97.0 0.00098 3.4E-08 62.5 6.5 118 49-224 74-194 (281)
212 3bzb_A Uncharacterized protein 97.0 0.00089 3E-08 62.6 6.0 116 50-227 79-209 (281)
213 2fhp_A Methylase, putative; al 96.9 0.00031 1.1E-08 60.4 2.4 79 50-158 44-127 (187)
214 2frn_A Hypothetical protein PH 96.9 0.00097 3.3E-08 62.3 5.5 102 51-226 126-228 (278)
215 3ntv_A MW1564 protein; rossman 96.9 0.0015 5.2E-08 58.9 6.7 36 50-101 71-106 (232)
216 3lcv_B Sisomicin-gentamicin re 96.9 0.00056 1.9E-08 64.2 3.6 138 33-202 116-259 (281)
217 2igt_A SAM dependent methyltra 96.8 0.0023 7.8E-08 61.7 7.4 118 50-226 153-275 (332)
218 2avd_A Catechol-O-methyltransf 96.8 0.002 7E-08 57.4 6.6 37 50-101 69-105 (229)
219 3frh_A 16S rRNA methylase; met 96.8 0.00066 2.3E-08 62.9 3.1 115 33-183 90-204 (253)
220 2yxl_A PH0851 protein, 450AA l 96.7 0.0011 3.8E-08 66.3 5.1 128 51-227 260-393 (450)
221 1sui_A Caffeoyl-COA O-methyltr 96.7 0.00081 2.8E-08 61.8 3.5 37 50-101 79-115 (247)
222 2ih2_A Modification methylase 96.7 0.0072 2.5E-07 59.0 10.1 122 50-225 39-166 (421)
223 2yvl_A TRMI protein, hypotheti 96.6 0.0037 1.3E-07 56.2 7.3 74 50-153 91-164 (248)
224 1wxx_A TT1595, hypothetical pr 96.6 0.0025 8.7E-08 62.2 6.3 114 50-225 209-327 (382)
225 3m4x_A NOL1/NOP2/SUN family pr 96.6 0.00085 2.9E-08 67.6 2.7 127 50-226 105-237 (456)
226 4dmg_A Putative uncharacterize 96.5 0.0049 1.7E-07 60.7 8.0 114 51-226 215-329 (393)
227 3c3p_A Methyltransferase; NP_9 96.5 0.00049 1.7E-08 60.9 0.3 36 50-100 56-91 (210)
228 3a27_A TYW2, uncharacterized p 96.5 0.0049 1.7E-07 57.3 7.0 106 50-228 119-224 (272)
229 3cbg_A O-methyltransferase; cy 96.4 0.0022 7.6E-08 57.9 4.2 35 51-100 73-107 (232)
230 3c3y_A Pfomt, O-methyltransfer 96.4 0.0015 5.2E-08 59.4 3.0 36 50-100 70-105 (237)
231 2f8l_A Hypothetical protein LM 96.4 0.0056 1.9E-07 58.7 7.0 128 50-225 130-258 (344)
232 3b3j_A Histone-arginine methyl 96.3 0.01 3.5E-07 60.0 8.9 76 50-157 158-234 (480)
233 2cmg_A Spermidine synthase; tr 96.3 0.0088 3E-07 55.5 7.8 100 49-223 71-171 (262)
234 1nv8_A HEMK protein; class I a 95.8 0.0059 2E-07 57.2 4.2 34 51-101 124-157 (284)
235 1zq9_A Probable dimethyladenos 95.8 0.0024 8.2E-08 59.9 1.2 80 50-162 28-108 (285)
236 2as0_A Hypothetical protein PH 95.7 0.0092 3.2E-07 58.4 5.2 118 50-226 217-338 (396)
237 3gru_A Dimethyladenosine trans 95.7 0.0052 1.8E-07 58.3 3.3 79 50-162 50-129 (295)
238 3tm4_A TRNA (guanine N2-)-meth 95.6 0.0054 1.9E-07 59.7 3.1 102 17-157 195-296 (373)
239 1ne2_A Hypothetical protein TA 95.6 0.022 7.7E-07 49.5 6.8 75 50-162 51-125 (200)
240 2b78_A Hypothetical protein SM 95.5 0.0095 3.3E-07 58.3 4.4 116 51-225 213-333 (385)
241 3gnl_A Uncharacterized protein 95.5 0.018 6.1E-07 53.2 5.9 106 49-223 20-125 (244)
242 3lec_A NADB-rossmann superfami 95.4 0.016 5.5E-07 53.0 5.4 106 49-223 20-125 (230)
243 3kr9_A SAM-dependent methyltra 95.4 0.023 8E-07 51.7 6.4 37 49-101 14-50 (225)
244 4gqb_A Protein arginine N-meth 94.9 0.017 5.7E-07 60.4 4.3 102 20-153 333-434 (637)
245 1qam_A ERMC' methyltransferase 94.9 0.013 4.6E-07 53.5 3.1 58 16-101 6-63 (244)
246 2h1r_A Dimethyladenosine trans 94.8 0.008 2.8E-07 56.8 1.3 108 12-162 14-121 (299)
247 3evf_A RNA-directed RNA polyme 94.6 0.062 2.1E-06 50.4 7.0 20 206-225 166-186 (277)
248 4azs_A Methyltransferase WBDD; 94.5 0.021 7.2E-07 58.7 3.7 82 49-162 65-149 (569)
249 2okc_A Type I restriction enzy 94.4 0.054 1.8E-06 53.8 6.3 21 204-224 288-308 (445)
250 2qm3_A Predicted methyltransfe 94.3 0.14 4.7E-06 49.6 8.9 106 50-225 172-280 (373)
251 3v97_A Ribosomal RNA large sub 94.2 0.031 1E-06 59.2 4.4 119 51-226 540-660 (703)
252 1wy7_A Hypothetical protein PH 94.2 0.055 1.9E-06 47.1 5.4 79 50-162 49-127 (207)
253 2yx1_A Hypothetical protein MJ 94.0 0.039 1.3E-06 52.8 4.3 32 50-100 195-226 (336)
254 3s1s_A Restriction endonucleas 94.0 0.72 2.5E-05 49.5 14.2 24 202-225 444-467 (878)
255 3tqs_A Ribosomal RNA small sub 93.7 0.043 1.5E-06 50.7 3.9 19 50-68 29-47 (255)
256 2qy6_A UPF0209 protein YFCK; s 93.7 0.26 8.9E-06 45.5 9.2 24 49-72 59-82 (257)
257 3fut_A Dimethyladenosine trans 93.6 0.026 8.8E-07 52.8 2.1 63 13-104 20-82 (271)
258 3khk_A Type I restriction-modi 93.4 0.34 1.1E-05 49.6 10.3 145 49-224 243-396 (544)
259 3c0k_A UPF0064 protein YCCW; P 93.4 0.034 1.2E-06 54.3 2.7 25 200-224 316-340 (396)
260 2jjq_A Uncharacterized RNA met 93.1 0.11 3.8E-06 51.5 6.1 34 50-101 290-323 (425)
261 3lkd_A Type I restriction-modi 92.6 0.34 1.2E-05 49.6 9.0 133 50-225 221-360 (542)
262 3k6r_A Putative transferase PH 92.5 0.2 6.9E-06 46.9 6.5 35 50-101 125-159 (278)
263 1yub_A Ermam, rRNA methyltrans 92.3 0.039 1.3E-06 50.1 1.3 34 50-101 29-62 (245)
264 2qfm_A Spermine synthase; sper 91.2 0.14 4.7E-06 49.9 3.8 36 49-101 187-222 (364)
265 3gcz_A Polyprotein; flavivirus 91.0 0.57 2E-05 43.9 7.7 20 206-225 182-203 (282)
266 1uwv_A 23S rRNA (uracil-5-)-me 90.8 0.11 3.7E-06 51.5 2.8 33 50-100 286-318 (433)
267 2b9e_A NOL1/NOP2/SUN domain fa 90.6 0.68 2.3E-05 43.7 8.1 39 51-104 103-141 (309)
268 2dul_A N(2),N(2)-dimethylguano 90.1 0.15 5.2E-06 49.7 3.1 35 51-101 48-82 (378)
269 4auk_A Ribosomal RNA large sub 90.0 0.67 2.3E-05 45.2 7.6 71 50-159 211-282 (375)
270 3uzu_A Ribosomal RNA small sub 89.8 0.076 2.6E-06 49.7 0.7 43 16-68 18-60 (279)
271 3eld_A Methyltransferase; flav 89.1 1.9 6.5E-05 40.7 9.6 20 206-225 173-193 (300)
272 2ar0_A M.ecoki, type I restric 88.6 0.57 2E-05 47.8 6.3 21 204-224 293-313 (541)
273 3ldu_A Putative methylase; str 87.0 2 7E-05 41.7 8.8 20 51-70 196-215 (385)
274 3ftd_A Dimethyladenosine trans 86.4 0.052 1.8E-06 49.9 -2.9 34 50-100 31-64 (249)
275 3k0b_A Predicted N6-adenine-sp 83.8 2.1 7.1E-05 41.8 7.2 21 50-70 201-221 (393)
276 3ldg_A Putative uncharacterize 83.4 3 0.0001 40.5 8.1 20 51-70 195-214 (384)
277 3ua3_A Protein arginine N-meth 81.6 1.9 6.4E-05 45.6 6.1 71 19-101 387-457 (745)
278 2k4m_A TR8_protein, UPF0146 pr 81.0 1.3 4.5E-05 37.7 3.9 34 50-100 35-69 (153)
279 1qyr_A KSGA, high level kasuga 79.1 1.1 3.7E-05 41.0 3.0 16 51-66 22-37 (252)
280 1m6y_A S-adenosyl-methyltransf 77.7 1.2 4.2E-05 41.9 3.0 37 51-103 27-63 (301)
281 2zig_A TTHA0409, putative modi 75.7 4.8 0.00016 37.3 6.5 27 198-224 72-98 (297)
282 2r6z_A UPF0341 protein in RSP 72.0 1.3 4.4E-05 40.7 1.5 32 51-100 84-115 (258)
283 3v97_A Ribosomal RNA large sub 71.1 8.9 0.00031 40.2 7.9 21 50-70 190-210 (703)
284 3o4f_A Spermidine synthase; am 70.8 21 0.0007 33.5 9.5 119 48-225 81-200 (294)
285 3bt7_A TRNA (uracil-5-)-methyl 63.0 5.3 0.00018 38.2 3.9 17 51-67 214-230 (369)
286 3p8z_A Mtase, non-structural p 58.0 6.8 0.00023 36.0 3.4 35 51-101 79-113 (267)
287 3ll7_A Putative methyltransfer 56.9 3.9 0.00013 40.2 1.7 17 51-67 94-110 (410)
288 3lkz_A Non-structural protein 55.5 6.7 0.00023 37.1 2.9 35 51-101 95-129 (321)
289 2oyr_A UPF0341 protein YHIQ; a 51.9 5.3 0.00018 36.6 1.6 17 52-68 90-106 (258)
290 2zig_A TTHA0409, putative modi 50.4 10 0.00035 35.0 3.4 36 50-103 235-270 (297)
291 3axs_A Probable N(2),N(2)-dime 47.3 20 0.00068 34.8 5.0 67 12-101 22-88 (392)
292 3vyw_A MNMC2; tRNA wobble urid 47.1 13 0.00044 35.1 3.5 24 49-72 95-118 (308)
293 4fzv_A Putative methyltransfer 44.3 36 0.0012 32.6 6.3 25 204-228 265-289 (359)
294 2vz8_A Fatty acid synthase; tr 42.0 28 0.00094 42.0 6.0 43 50-103 1240-1282(2512)
295 2px2_A Genome polyprotein [con 38.2 10 0.00036 35.0 1.3 18 50-67 73-90 (269)
296 3pvc_A TRNA 5-methylaminomethy 31.5 24 0.00082 36.5 2.9 24 49-72 57-80 (689)
297 3c6k_A Spermine synthase; sper 29.6 78 0.0027 30.6 6.0 21 203-223 311-331 (381)
298 2wk1_A NOVP; transferase, O-me 28.1 71 0.0024 29.4 5.2 19 49-67 105-123 (282)
299 1wg8_A Predicted S-adenosylmet 26.3 38 0.0013 31.5 3.0 20 51-70 23-42 (285)
300 3qua_A Putative uncharacterize 25.9 45 0.0016 29.2 3.3 41 239-282 158-198 (199)
301 3ps9_A TRNA 5-methylaminomethy 23.3 40 0.0014 34.7 2.8 24 49-72 65-88 (676)
302 1wek_A Hypothetical protein TT 22.8 95 0.0032 27.4 4.8 41 239-282 172-212 (217)
303 2v1n_A KIN17, protein KIN homo 22.7 59 0.002 25.9 3.0 72 187-290 12-83 (111)
304 1g60_A Adenine-specific methyl 21.0 66 0.0023 28.7 3.5 18 50-67 212-229 (260)
305 1q1h_A TFE, transcription fact 20.6 43 0.0015 25.5 1.9 41 242-282 49-93 (110)
306 3sbx_A Putative uncharacterize 20.6 81 0.0028 27.3 3.8 40 239-281 149-188 (189)
307 2lmc_A Bacterial RNA polymeras 20.4 64 0.0022 24.0 2.6 32 261-293 44-79 (84)
No 1
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=2.1e-98 Score=743.35 Aligned_cols=355 Identities=40% Similarity=0.645 Sum_probs=316.2
Q ss_pred CCccceeccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCC---ceEEEeecCCCCcchHHHHHHHHHHHH
Q 017747 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPK---TINIADLGCSSGPNTLAIIKDFVQTVE 77 (366)
Q Consensus 1 ~~~~~~l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~---~~~IaDlGCs~G~ns~~~~~~ii~~l~ 77 (366)
|+++++|||+||+|++||++||. |++++..++|++++||++++....++ +++|||||||+|+||+++++.||++++
T Consensus 1 m~~~~~~~M~gg~G~~sY~~nS~-Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~ 79 (384)
T 2efj_A 1 MELQEVLHMNGGEGDTSYAKNSS-YNLFLIRVKPVLEQCIQELLRANLPNINKCFKVGDLGCASGPNTFSTVRDIVQSID 79 (384)
T ss_dssp --CTTTCCCCC----CCHHHHCC-TTTTHHHHHHHHHHHHHHHHHTTCTTTTTEEEEEEETCCSSHHHHHHHHHHHHHHT
T ss_pred CCcccccccCCCCChhhHHHhHH-HHHHHHHHHHHHHHHHHHhhhcccCCcCCceEEEecCCCCCchHHHHHHHHHHHHH
Confidence 88999999999999999999999 99999999999999999998865566 899999999999999999999999999
Q ss_pred HHhhh--hhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEccc
Q 017747 78 MTSRE--ILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSN 155 (366)
Q Consensus 78 ~~~~~--~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~ 155 (366)
++|.. . +.++|++||++||||+||||+||++||.+.+++.+..|.+ .++||++|||||||+||||++|+|++||++
T Consensus 80 ~~~~~~~~-~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~-~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~ 157 (384)
T 2efj_A 80 KVGQEKKN-ELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRK-IGSCLIGAMPGSFYSRLFPEESMHFLHSCY 157 (384)
T ss_dssp CC-----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCC-TTSEEEEECCSCTTSCCSCTTCEEEEEEES
T ss_pred HHhhhccc-CCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCC-CCceEEEecchhhhhccCCCCceEEEEecc
Confidence 98754 3 4467899999999999999999999999998887766654 678999999999999999999999999999
Q ss_pred ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCC--CCCC
Q 017747 156 SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGP--DHVD 233 (366)
Q Consensus 156 alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~--~~~~ 233 (366)
||||||++|+.+.++.+++||||+|||+.++|++|.+||++||++||++||++|++||||||+||++++|+++. ++++
T Consensus 158 aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~ 237 (384)
T 2efj_A 158 CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNS 237 (384)
T ss_dssp CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCH
T ss_pred eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987 6553
Q ss_pred CCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCC---Cc-------
Q 017747 234 RGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGH---DR------- 303 (366)
Q Consensus 234 ~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~---~d------- 303 (366)
+ +.+.++|++||.+|+|+++++|+|++|+|+||++|++++|+++|+|+|+++|.++..|+++ ++
T Consensus 238 ~------~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~~~~~~ 311 (384)
T 2efj_A 238 M------DLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGRSH 311 (384)
T ss_dssp H------HHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---------
T ss_pred H------HHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeeccccccccccccccccc
Confidence 2 3899999999999999999999999999999999999999999999999999999999876 33
Q ss_pred ------ccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEeeC
Q 017747 304 ------GESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVLLLRKL 366 (366)
Q Consensus 304 ------~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~~~l~k~ 366 (366)
....++.+++++||++||+|.+||| ++++|+||+||+++++++++.++.++++++++|+||
T Consensus 312 ~~~~~d~~~~g~~~a~~iRa~~epll~~hfG--~~i~d~lF~ry~~~~~~~~~~~~~~~~~~~~~L~k~ 378 (384)
T 2efj_A 312 SPVSCDEHARAAHVASVVRSIYEPILASHFG--EAILPDLSHRIAKNAAKVLRSGKGFYDSVIISLAKK 378 (384)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHC--STTHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEEEC
T ss_pred ccccchHhHhHHHhhhhhHHhhhhhhHHhcc--HHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEEc
Confidence 1357889999999999999999999 999999999999999999999999999999999996
No 2
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=2.2e-98 Score=737.79 Aligned_cols=348 Identities=44% Similarity=0.764 Sum_probs=328.6
Q ss_pred CCccceeccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhc-CCCceEEEeecCCCCcchHHHHHHHHHHHHHH
Q 017747 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEI-DPKTINIADLGCSSGPNTLAIIKDFVQTVEMT 79 (366)
Q Consensus 1 ~~~~~~l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~-~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~ 79 (366)
|+++++|||+||+|++||++||.+|++++..++|++++||++++... .+++++|||||||+|+||+++++.||++|+++
T Consensus 1 m~~~~~~~m~gg~G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~ 80 (359)
T 1m6e_X 1 MDVRQVLHMKGGAGENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEEL 80 (359)
T ss_dssp CCCHHHHCCCCCTTSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHH
T ss_pred CCcccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999998765 67899999999999999999999999999999
Q ss_pred hhhhhcC-CCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccc
Q 017747 80 SREILQN-PAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLH 158 (366)
Q Consensus 80 ~~~~~~~-~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alh 158 (366)
|.+. ++ ++|++||+|||||+||||+||++|+.+. + . .++||++|||||||+||||++|+|++||++|||
T Consensus 81 ~~~~-~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~----~---~--~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLH 150 (359)
T 1m6e_X 81 RKKM-GRENSPEYQIFLNDLPGNDFNAIFRSLPIEN----D---V--DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLM 150 (359)
T ss_dssp HHSS-SCSSCCEEEEEEEECTTSCHHHHHTTTTTSC----S---C--TTCEEEEEEESCSSSCCSCTTCBSCEEEESCTT
T ss_pred HHhc-CCCCCCceEEEecCCCchHHHHHHHhcchhc----c---c--CCCEEEEecchhhhhccCCCCceEEEEehhhhh
Confidence 8765 54 6789999999999999999999999754 1 0 247999999999999999999999999999999
Q ss_pred cccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchh
Q 017747 159 WLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSF 238 (366)
Q Consensus 159 Wls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~ 238 (366)
|||++|+.+.+ |||+|||+.++|++|.+||++||++||+.||++|++||||||+||++++|+++.++++++.+.
T Consensus 151 Wls~~p~~l~~------nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~ 224 (359)
T 1m6e_X 151 WLSQVPIGIES------NKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCL 224 (359)
T ss_dssp BCSSCCSCCCC------CTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTST
T ss_pred hcccCchhhhc------cCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHH
Confidence 99999999876 999999999999999999999999999999999999999999999999999999888888778
Q ss_pred HHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCcc-------cchhhhH
Q 017747 239 FWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRG-------ESYGSAV 311 (366)
Q Consensus 239 ~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d~-------~~~~~~~ 311 (366)
+|+.|.++|++||.+|+|++|++|+|++|+|+||++|++++|+++|+|+|+++|.++..|++++++ ...++.+
T Consensus 225 ~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~~d~~~~~~~~g~~~ 304 (359)
T 1m6e_X 225 IWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNV 304 (359)
T ss_dssp TTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHH
T ss_pred HHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccchhhhhhhhhHhHhHh
Confidence 999999999999999999999999999999999999999999999999999999999999876542 4678999
Q ss_pred hhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEeeC
Q 017747 312 ARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVLLLRKL 366 (366)
Q Consensus 312 ~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~~~l~k~ 366 (366)
++++|||+||+|.+||| ++++|+||+||+++++++++.+++++++++++|+||
T Consensus 305 a~~~Ra~~e~ll~~hfG--~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~L~k~ 357 (359)
T 1m6e_X 305 ARCMRAVAEPLLLDHFG--EAIIEDVFHRYKLLIIERMSKEKTKFINVIVSLIRK 357 (359)
T ss_dssp HHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEEEEBC
T ss_pred hhhhhhhcchhhHHhcc--HHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEeC
Confidence 99999999999999999 999999999999999999999999999999999997
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-94 Score=714.42 Aligned_cols=359 Identities=32% Similarity=0.556 Sum_probs=301.9
Q ss_pred CCccceeccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhc--CCCceEEEeecCCCCcchHHHHHHHHHHHHH
Q 017747 1 MDVEKLFHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEI--DPKTINIADLGCSSGPNTLAIIKDFVQTVEM 78 (366)
Q Consensus 1 ~~~~~~l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~--~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~ 78 (366)
|+++++|||+||+|++||++||.+|++++..++|++++||+++.... .+++++|||||||+|+||+.+++.||+++++
T Consensus 1 m~~~~~~~m~gg~g~~sY~~nS~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~ 80 (374)
T 3b5i_A 1 MKLERLLSMKGGKGQDSYANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISK 80 (374)
T ss_dssp -------------------------CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHH
T ss_pred CCcccccCCCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999887754 4678999999999999999999999999999
Q ss_pred HhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhh---hcCCCCCCceEEeccCCCcccccCCCCcccEEEccc
Q 017747 79 TSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRN---ERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSN 155 (366)
Q Consensus 79 ~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~---~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~ 155 (366)
+|... |.++|++||++||||+||||+||++|+.+.+.+.. ..+.+ .++||++|||||||+||||++|+|++||++
T Consensus 81 ~~~~~-~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~-~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~ 158 (374)
T 3b5i_A 81 RFDAA-GIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADG-NRSYFVAGVPGSFYRRLFPARTIDFFHSAF 158 (374)
T ss_dssp HHHHT-TCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CC-CBCSEEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred HHhhc-CCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccC-CCceEEEecChhhhcccCCCcceEEEEecc
Confidence 98765 66678999999999999999999999976543211 11122 457999999999999999999999999999
Q ss_pred ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCC-
Q 017747 156 SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDR- 234 (366)
Q Consensus 156 alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~- 234 (366)
||||||++|+.+.++.+++||||+|||+.++|+ |.+||++||++||..||++|++||||||+||++++|+++.++++.
T Consensus 159 aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~-v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~ 237 (374)
T 3b5i_A 159 SLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEK-TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQG 237 (374)
T ss_dssp CTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCH
T ss_pred eeeeeccCchhhhccccccccCCceEeCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCcccccc
Confidence 999999999999999999999999999999998 999999999999999999999999999999999999999877763
Q ss_pred CchhHH-HHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCcc----cchhh
Q 017747 235 GNSFFW-ELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRG----ESYGS 309 (366)
Q Consensus 235 ~~~~~~-~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d~----~~~~~ 309 (366)
+.+.+| +.+.++|++|+.||+++++++|+|++|+|+||++|++++|+++|+|+|++++.++.+|++..+. ...++
T Consensus 238 ~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~~~~~~~g~ 317 (374)
T 3b5i_A 238 GAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEPDDASEVGR 317 (374)
T ss_dssp HHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSSTTCHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccccchhHHHHH
Confidence 345678 9999999999999999999999999999999999999999987889999999999999765331 46789
Q ss_pred hHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHH--hcCCC--cEEEEEEEe
Q 017747 310 AVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMA--KEEIK--PLTFVLLLR 364 (366)
Q Consensus 310 ~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~--~~~~~--~~~~~~~l~ 364 (366)
.+++++|||+||+|.+||| ++++|+||+||+++++++++ .++.+ +++++++|+
T Consensus 318 ~~a~~~Ra~~e~ll~~hfg--~~i~d~lf~ry~~~~~~~~~~~~~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 318 AFASSCRSVAGVLVEAHIG--EELSNKLFSRVESRATSHAKDVLVNLQFFHIVASLSFT 374 (374)
T ss_dssp HHHHHHHHHHHHHHHTTSC--HHHHHHHHHHHHHHHHHTCHHHHTTCCCEEEEEEEEEC
T ss_pred HHHHHHHHhccchhHhhcc--HHHHHHHHHHHHHHHHHhHHHhhhccccceEEEEEEeC
Confidence 9999999999999999999 99999999999999999887 66666 788888885
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=2.4e-14 Score=134.26 Aligned_cols=251 Identities=16% Similarity=0.172 Sum_probs=147.9
Q ss_pred eccCCCCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcC
Q 017747 7 FHMAGGTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQN 86 (366)
Q Consensus 7 l~M~gg~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~ 86 (366)
-.|.....+..|++++..|+.....+...+. .....+|+|+|||+|..+..+. +
T Consensus 24 ~~~~~~w~a~~y~~~~~~~~~~~~~l~~~l~----------~~~~~~vLDiGcG~G~~~~~l~--------~-------- 77 (279)
T 3ccf_A 24 GTAKNFWDATLYQDKHSFVWQYGEDLLQLLN----------PQPGEFILDLGCGTGQLTEKIA--------Q-------- 77 (279)
T ss_dssp -----------------CCSSSCCHHHHHHC----------CCTTCEEEEETCTTSHHHHHHH--------H--------
T ss_pred ccchhhcCHHHHhhcchHHHHHHHHHHHHhC----------CCCCCEEEEecCCCCHHHHHHH--------h--------
Confidence 3455544466888888777665554443221 1345799999999999987431 1
Q ss_pred CCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCc
Q 017747 87 PAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPT 166 (366)
Q Consensus 87 ~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~ 166 (366)
+..+|+..|+.......+-+..+ +..|.. +++.. +-+++++|+++++.++||+.+.
T Consensus 78 --~~~~v~gvD~s~~~~~~a~~~~~---------------~~~~~~---~d~~~-~~~~~~fD~v~~~~~l~~~~d~--- 133 (279)
T 3ccf_A 78 --SGAEVLGTDNAATMIEKARQNYP---------------HLHFDV---ADARN-FRVDKPLDAVFSNAMLHWVKEP--- 133 (279)
T ss_dssp --TTCEEEEEESCHHHHHHHHHHCT---------------TSCEEE---CCTTT-CCCSSCEEEEEEESCGGGCSCH---
T ss_pred --CCCeEEEEECCHHHHHHHHhhCC---------------CCEEEE---CChhh-CCcCCCcCEEEEcchhhhCcCH---
Confidence 22689999986543332222111 112333 34433 4346899999999999997542
Q ss_pred ccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHH
Q 017747 167 LYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRS 246 (366)
Q Consensus 167 ~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~a 246 (366)
..+|+.-.+-|+|||++++...+..+. ..+.+.+...
T Consensus 134 ------------------------------------~~~l~~~~~~LkpgG~l~~~~~~~~~~-------~~~~~~~~~~ 170 (279)
T 3ccf_A 134 ------------------------------------EAAIASIHQALKSGGRFVAEFGGKGNI-------KYILEALYNA 170 (279)
T ss_dssp ------------------------------------HHHHHHHHHHEEEEEEEEEEEECTTTT-------HHHHHHHHHH
T ss_pred ------------------------------------HHHHHHHHHhcCCCcEEEEEecCCcch-------HHHHHHHHHH
Confidence 134566689999999999998876441 1233334433
Q ss_pred HHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeeccCCCCcccchhhhHhhhHHHhhhhHHHhh
Q 017747 247 LAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVERQGHDRGESYGSAVARTVRAIQESTIIHH 326 (366)
Q Consensus 247 l~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~ 326 (366)
+... |. .......|+++++.+++.+.+++.| |++...+.+..++.... ..+.+..|++++..+++. .
T Consensus 171 ~~~~---~~----~~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~-~ 237 (279)
T 3ccf_A 171 LETL---GI----HNPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTLAE----GEFGMANWIQMFASAFLV-G 237 (279)
T ss_dssp HHHH---TC----CCGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEECSS----GGGHHHHHHHHHCHHHHT-T
T ss_pred HHhc---CC----ccccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEecccccccC----CHHHHHHHHHHhhHHHhc-c
Confidence 3332 21 1234566788999999999999999 99988887765542221 134677888887777663 4
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEee
Q 017747 327 FGIGEGVLDNLFEIYGRLVDEEMAKEE---IKPLTFVLLLRK 365 (366)
Q Consensus 327 ~g~~~~i~d~lf~r~~~~~~~~~~~~~---~~~~~~~~~l~k 365 (366)
++ ++..+++.+++.+.+.......+ ..+..+++.-+|
T Consensus 238 ~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~v~a~K 277 (279)
T 3ccf_A 238 LT--PDQQVQLIRKVEATLQDKLYHQESWTADYRRIRIVSIK 277 (279)
T ss_dssp CC--HHHHHHHHHHHHHHHHHHHEETTEEEECCEEEEEEEEE
T ss_pred CC--HHHHHHHHHHHHHHHHhhccCCCcEEEEEEEEEEEEec
Confidence 66 77888888888888876543222 234444554444
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=4.5e-14 Score=130.07 Aligned_cols=229 Identities=10% Similarity=0.112 Sum_probs=140.7
Q ss_pred cchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEE
Q 017747 15 PTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFY 94 (366)
Q Consensus 15 ~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~ 94 (366)
...|++.+..|......++..+. .....+|+|+|||+|..+..+. ++. |..+++
T Consensus 8 ~~~y~~~~~~~~~~~~~l~~~~~----------~~~~~~vLdiG~G~G~~~~~l~--------~~~--------~~~~v~ 61 (259)
T 2p35_A 8 AQQYLKFEDERTRPARDLLAQVP----------LERVLNGYDLGCGPGNSTELLT--------DRY--------GVNVIT 61 (259)
T ss_dssp CGGGBCCCCGGGHHHHHHHTTCC----------CSCCSSEEEETCTTTHHHHHHH--------HHH--------CTTSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------CCCCCEEEEecCcCCHHHHHHH--------HhC--------CCCEEE
Confidence 56899988888777654332111 2345799999999999987532 221 237889
Q ss_pred ecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCC
Q 017747 95 LNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGES 174 (366)
Q Consensus 95 ~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~ 174 (366)
..|+.......+-+.. .+-.|.. +++.+ +.|++++|+++|+.++||+.+
T Consensus 62 ~~D~s~~~~~~a~~~~---------------~~~~~~~---~d~~~-~~~~~~fD~v~~~~~l~~~~~------------ 110 (259)
T 2p35_A 62 GIDSDDDMLEKAADRL---------------PNTNFGK---ADLAT-WKPAQKADLLYANAVFQWVPD------------ 110 (259)
T ss_dssp EEESCHHHHHHHHHHS---------------TTSEEEE---CCTTT-CCCSSCEEEEEEESCGGGSTT------------
T ss_pred EEECCHHHHHHHHHhC---------------CCcEEEE---CChhh-cCccCCcCEEEEeCchhhCCC------------
Confidence 9998654333222211 1123333 35544 337889999999999999743
Q ss_pred CccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcC
Q 017747 175 INKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQG 254 (366)
Q Consensus 175 ~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG 254 (366)
...+|+.-.+-|+|||+++++..+.... .....+.++...+
T Consensus 111 ---------------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~------------~~~~~~~~~~~~~ 151 (259)
T 2p35_A 111 ---------------------------HLAVLSQLMDQLESGGVLAVQMPDNLQE------------PTHIAMHETADGG 151 (259)
T ss_dssp ---------------------------HHHHHHHHGGGEEEEEEEEEEEECCTTS------------HHHHHHHHHHHHS
T ss_pred ---------------------------HHHHHHHHHHhcCCCeEEEEEeCCCCCc------------HHHHHHHHHhcCc
Confidence 1234666789999999999998754321 1122233333222
Q ss_pred ccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEE-eeccCCCCcccchhhhHhhhHHHhh-hhHHHhhcCCCcc
Q 017747 255 EIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMF-QVERQGHDRGESYGSAVARTVRAIQ-ESTIIHHFGIGEG 332 (366)
Q Consensus 255 ~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~-~~~~~~~~d~~~~~~~~~~~~Ra~~-e~~l~~~~g~~~~ 332 (366)
.......+....+..+++++++.+.+++.| |++...+.. ..++ . ..+.+..|+++.. .+++ ..++ ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~~~---~----~~~~~~~~l~~~~~~~~~-~~~~--~~ 220 (259)
T 2p35_A 152 PWKDAFSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTVYNHPM---K----DADSIVEWVKGTGLRPYL-AAAG--EE 220 (259)
T ss_dssp TTGGGC-------CCCCCHHHHHHHHGGGE-EEEEEEEEEEEEEE---S----CHHHHHHHHTTTTTTHHH-HTTC--GG
T ss_pred chHHHhccccccccCCCCHHHHHHHHHhcC-CceEEEEEEeeecc---C----CchHHhhhhhcCcchHHH-HhCC--HH
Confidence 111111111134667899999999999999 887555432 2222 1 2456777887764 3444 4577 88
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 017747 333 VLDNLFEIYGRLVDEEMA 350 (366)
Q Consensus 333 i~d~lf~r~~~~~~~~~~ 350 (366)
..+++.+++.+.+.+.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~ 238 (259)
T 2p35_A 221 NREAFLADYTRRIAAAYP 238 (259)
T ss_dssp GHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 889999999888887654
No 6
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.42 E-value=2e-12 Score=119.02 Aligned_cols=220 Identities=15% Similarity=0.148 Sum_probs=132.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.+. +. .++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~~----------~~--~~~ 87 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPL--------IAR----------GYRYIALDADAAMLEVFRQKIA----------GV--DRK 87 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHH--------HTT----------TCEEEEEESCHHHHHHHHHHTT----------TS--CTT
T ss_pred CCCCEEEEeCCcCCHHHHHH--------HHC----------CCEEEEEECCHHHHHHHHHHhh----------cc--CCc
Confidence 34689999999999998742 111 2678999986543333322220 00 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++.+-.+|++++|+++++.++||+.+. ..+|+
T Consensus 88 ~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~ 125 (263)
T 2yqz_A 88 VQVVQ---ADARAIPLPDESVHGVIVVHLWHLVPDW---------------------------------------PKVLA 125 (263)
T ss_dssp EEEEE---SCTTSCCSCTTCEEEEEEESCGGGCTTH---------------------------------------HHHHH
T ss_pred eEEEE---cccccCCCCCCCeeEEEECCchhhcCCH---------------------------------------HHHHH
Confidence 2 333 4665444789999999999999997531 23455
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHc-CccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQ-GEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~e-G~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.-.+-|+|||++++.+...+. ...+ .+...|.++... |. ....+.++++.+++.+.+++.| |
T Consensus 126 ~~~~~L~pgG~l~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~G-f 188 (263)
T 2yqz_A 126 EAIRVLKPGGALLEGWDQAEA--------SPEW-TLQERWRAFAAEEGF-------PVERGLHAKRLKEVEEALRRLG-L 188 (263)
T ss_dssp HHHHHEEEEEEEEEEEEEECC--------CHHH-HHHHHHHHHHHHHTC-------CCCCCHHHHHHHHHHHHHHHTT-C
T ss_pred HHHHHCCCCcEEEEEecCCCc--------cHHH-HHHHHHHHHHHHhCC-------CcccccccCCHHHHHHHHHHcC-C
Confidence 668899999999999433211 0111 122333333211 21 0122456778999999999999 9
Q ss_pred EEeeEEEEeeccCCCCcccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEE
Q 017747 287 KLDQLDMFQVERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEE---IKPLTFVLLL 363 (366)
Q Consensus 287 ~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~---~~~~~~~~~l 363 (366)
++...+..... .. ...+.+..++++.+.+.+ .+++ ++..+++.+++++.+.+.....+ .....+++..
T Consensus 189 ~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 259 (263)
T 2yqz_A 189 KPRTREVARWR--EE----RTPREALEALSERLYSFT-QGLP--EPVHARVMERLWAWAEAELGDLDRPFPVEKRFLLRV 259 (263)
T ss_dssp CCEEEEEEEEE--EE----ECHHHHHHHHHTTCSGGG-SSSC--HHHHHHHHHHHHHHHHHHSSCTTSCEEEEEEEEEEE
T ss_pred CcceEEEeeee--cC----CCHHHHHHHHHHhhcccc-cCCC--HHHHHHHHHHHHHHHHHhcCCcCccccccceeEEEe
Confidence 87666554322 11 123556667766555554 4566 78888888888888887654322 1233444444
Q ss_pred eeC
Q 017747 364 RKL 366 (366)
Q Consensus 364 ~k~ 366 (366)
.||
T Consensus 260 ~rk 262 (263)
T 2yqz_A 260 SRL 262 (263)
T ss_dssp EEC
T ss_pred eec
Confidence 443
No 7
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.36 E-value=2.5e-11 Score=110.22 Aligned_cols=168 Identities=18% Similarity=0.146 Sum_probs=111.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.+..+|+|+|||+|..+.. +.+. .|..+++..|+.......+-+.+.. .++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~--------l~~~--------~~~~~v~~vD~s~~~~~~a~~~~~~-------------~~~ 93 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAF--------LMEK--------YPEATFTLVDMSEKMLEIAKNRFRG-------------NLK 93 (234)
T ss_dssp CSSCEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEESCHHHHHHHHHHTCS-------------CTT
T ss_pred CCCCeEEEecCCCCHHHHH--------HHHh--------CCCCeEEEEECCHHHHHHHHHhhcc-------------CCC
Confidence 3568999999999999874 3332 2348899999865433333222221 112
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |+. +++.+-.++ +++|+++++.++||++. .+...+|+
T Consensus 94 ~~~~~---~d~~~~~~~-~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~ 132 (234)
T 3dtn_A 94 VKYIE---ADYSKYDFE-EKYDMVVSALSIHHLED-------------------------------------EDKKELYK 132 (234)
T ss_dssp EEEEE---SCTTTCCCC-SCEEEEEEESCGGGSCH-------------------------------------HHHHHHHH
T ss_pred EEEEe---CchhccCCC-CCceEEEEeCccccCCH-------------------------------------HHHHHHHH
Confidence 2 333 466544455 99999999999999733 12234567
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhccc---CccccCCCHHHHHHHHhhcC
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAY---HAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f---~~P~y~ps~eEv~~~i~~~g 284 (366)
.-.+-|+|||+++++....++. ..........|.....++-++.+++..+ ..-.+.++.+|+.+.++++|
T Consensus 133 ~~~~~LkpgG~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 205 (234)
T 3dtn_A 133 RSYSILKESGIFINADLVHGET-------AFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG 205 (234)
T ss_dssp HHHHHEEEEEEEEEEEECBCSS-------HHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT
T ss_pred HHHHhcCCCcEEEEEEecCCCC-------hhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC
Confidence 7789999999999998766542 2234456667777766666666655432 12345679999999999999
Q ss_pred ceEEeeEEEE
Q 017747 285 SFKLDQLDMF 294 (366)
Q Consensus 285 sf~i~~~e~~ 294 (366)
|++.++...
T Consensus 206 -F~~v~~~~~ 214 (234)
T 3dtn_A 206 -FRDVSCIYK 214 (234)
T ss_dssp -CEEEEEEEE
T ss_pred -CCceeeeee
Confidence 988666543
No 8
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.23 E-value=1.4e-10 Score=107.59 Aligned_cols=196 Identities=12% Similarity=0.151 Sum_probs=113.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. . ..+++..|+........-+.+ ...+.. .+..
T Consensus 61 ~~~~vLDiGcG~G~~~~~l--------~~~--------~-~~~v~gvD~s~~~~~~a~~~~--------~~~~~~-~~~~ 114 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRL--------ATA--------R-DVRVTGISISRPQVNQANARA--------TAAGLA-NRVT 114 (273)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHH--------S-CCEEEEEESCHHHHHHHHHHH--------HHTTCT-TTEE
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHh--------c-CCEEEEEeCCHHHHHHHHHHH--------HhcCCC-cceE
Confidence 4579999999999988753 222 1 268888998653322221111 111110 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+-.+|++++|+++|+.++||+.+. ..+|+.-
T Consensus 115 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~~ 152 (273)
T 3bus_A 115 FSY---ADAMDLPFEDASFDAVWALESLHHMPDR---------------------------------------GRALREM 152 (273)
T ss_dssp EEE---CCTTSCCSCTTCEEEEEEESCTTTSSCH---------------------------------------HHHHHHH
T ss_pred EEE---CccccCCCCCCCccEEEEechhhhCCCH---------------------------------------HHHHHHH
Confidence 333 4665555888999999999999997431 1346677
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++..+...+... . .....+..+. ..+ ...++++.+++.+.+++.| |++.
T Consensus 153 ~~~L~pgG~l~i~~~~~~~~~~------~---~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~l~~aG-f~~~ 211 (273)
T 3bus_A 153 ARVLRPGGTVAIADFVLLAPVE------G---AKKEAVDAFR----------AGG-GVLSLGGIDEYESDVRQAE-LVVT 211 (273)
T ss_dssp HTTEEEEEEEEEEEEEESSCCC------H---HHHHHHHHHH----------HHH-TCCCCCCHHHHHHHHHHTT-CEEE
T ss_pred HHHcCCCeEEEEEEeeccCCCC------h---hHHHHHHHHH----------hhc-CccCCCCHHHHHHHHHHcC-CeEE
Confidence 8999999999999887653210 1 1111222211 011 1235789999999999999 9987
Q ss_pred eEEEEeeccCCCCcccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHH
Q 017747 290 QLDMFQVERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGR 343 (366)
Q Consensus 290 ~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~ 343 (366)
..+.+...+... + ..+...+++.... +...+| ++..+.+.+.++.
T Consensus 212 ~~~~~~~~~~~~-----~-~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 256 (273)
T 3bus_A 212 STVDISAQARPS-----L-VKTAEAFENARSQ-VEPFMG--AEGLDRMIATFRG 256 (273)
T ss_dssp EEEECHHHHTTH-----H-HHHHHHHHHTHHH-HHHHHC--HHHHHHHHHHHHH
T ss_pred EEEECcHhHHHH-----H-HHHHHHHHHhHHH-HHhhcC--HHHHHHHHHHHHH
Confidence 776654332110 1 1122222222222 335577 6666666555554
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.21 E-value=2.1e-09 Score=98.72 Aligned_cols=152 Identities=15% Similarity=0.138 Sum_probs=99.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +.+ ..+|+..|+........-+.... ..++
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~--------~~~---------~~~v~~vD~s~~~~~~a~~~~~~-------------~~~~ 104 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYIN--------EKY---------GAHTHGIDICSNIVNMANERVSG-------------NNKI 104 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH---------CCEEEEEESCHHHHHHHHHTCCS-------------CTTE
T ss_pred CCCEEEEECCCCCHHHHHHH--------HHc---------CCEEEEEeCCHHHHHHHHHHhhc-------------CCCe
Confidence 45799999999999987532 221 16888999865433322222211 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. +++.+-.+|++++|+++++.++||++. .|...+|+.
T Consensus 105 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 144 (266)
T 3ujc_A 105 IFEA---NDILTKEFPENNFDLIYSRDAILALSL-------------------------------------ENKNKLFQK 144 (266)
T ss_dssp EEEE---CCTTTCCCCTTCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred EEEE---CccccCCCCCCcEEEEeHHHHHHhcCh-------------------------------------HHHHHHHHH
Confidence 333 466555678999999999999999721 245567788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++..+...+..+. .+.+...+.. . ...+++.+++.+.+++.| |++
T Consensus 145 ~~~~L~pgG~l~~~~~~~~~~~~~-------~~~~~~~~~~---~-------------~~~~~~~~~~~~~l~~~G-f~~ 200 (266)
T 3ujc_A 145 CYKWLKPTGTLLITDYCATEKENW-------DDEFKEYVKQ---R-------------KYTLITVEEYADILTACN-FKN 200 (266)
T ss_dssp HHHHEEEEEEEEEEEEEESCGGGC-------CHHHHHHHHH---H-------------TCCCCCHHHHHHHHHHTT-CEE
T ss_pred HHHHcCCCCEEEEEEeccCCcccc-------hHHHHHHHhc---C-------------CCCCCCHHHHHHHHHHcC-CeE
Confidence 899999999999998866542111 1112221111 1 234679999999999999 988
Q ss_pred eeEEEEe
Q 017747 289 DQLDMFQ 295 (366)
Q Consensus 289 ~~~e~~~ 295 (366)
.+.+.+.
T Consensus 201 ~~~~~~~ 207 (266)
T 3ujc_A 201 VVSKDLS 207 (266)
T ss_dssp EEEEECH
T ss_pred EEEEeCC
Confidence 7666443
No 10
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.19 E-value=6.8e-10 Score=105.09 Aligned_cols=223 Identities=13% Similarity=0.144 Sum_probs=127.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+.... + .+|+..|+..+.....-+.+. ..+. ..++
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~----------------~-~~v~gvD~s~~~~~~a~~~~~--------~~~~--~~~v 124 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEY----------------D-VNVIGLTLSENQYAHDKAMFD--------EVDS--PRRK 124 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH----------------C-CEEEEEECCHHHHHHHHHHHH--------HSCC--SSCE
T ss_pred CcCEEEEeeccCcHHHHHHHHhC----------------C-CEEEEEECCHHHHHHHHHHHH--------hcCC--CCce
Confidence 45799999999999987532211 2 679999986543332222111 1111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. +++. .+ ++++|+++|..++|++.+ |..... .+++..+|+.
T Consensus 125 ~~~~---~d~~-~~--~~~fD~v~~~~~~~~~~d-~~~~~~-----------------------------~~~~~~~l~~ 168 (302)
T 3hem_A 125 EVRI---QGWE-EF--DEPVDRIVSLGAFEHFAD-GAGDAG-----------------------------FERYDTFFKK 168 (302)
T ss_dssp EEEE---CCGG-GC--CCCCSEEEEESCGGGTTC-CSSCCC-----------------------------TTHHHHHHHH
T ss_pred EEEE---CCHH-Hc--CCCccEEEEcchHHhcCc-cccccc-----------------------------hhHHHHHHHH
Confidence 333 3552 33 889999999999999877 321111 1356778888
Q ss_pred HHHHhccCceEEEEeecCCCCCCCC-CCchhHHHHHHHHHHHHHHcCccchhhhcccCccc-cCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVD-RGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHF-YAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~-~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~-y~ps~eEv~~~i~~~gsf 286 (366)
-.+-|+|||++++......+..... .......+ ...+.+... ....|. +.|+.+++.+.+++.| |
T Consensus 169 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----------~~~~p~~~~~s~~~~~~~l~~aG-f 235 (302)
T 3hem_A 169 FYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMS--LLRFIKFIL----------TEIFPGGRLPRISQVDYYSSNAG-W 235 (302)
T ss_dssp HHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHH--HHHHHHHHH----------HHTCTTCCCCCHHHHHHHHHHHT-C
T ss_pred HHHhcCCCcEEEEEEEeccCccchhhcccccccc--ccchHHHHH----------HhcCCCCCCCCHHHHHHHHHhCC-c
Confidence 9999999999999988776421000 00000000 011112211 123343 6799999999999999 9
Q ss_pred EEeeEEEEeeccCCCCcccchhhhHhhhHHHhhh--hHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 017747 287 KLDQLDMFQVERQGHDRGESYGSAVARTVRAIQE--STIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFV 360 (366)
Q Consensus 287 ~i~~~e~~~~~~~~~~d~~~~~~~~~~~~Ra~~e--~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~ 360 (366)
++..++.+... ++.++..|.+.+-. +-+...++ ++..+ .|+.|-.-.+..++........++
T Consensus 236 ~~~~~~~~~~~---------y~~tl~~w~~~~~~~~~~~~~~~~--~~~~~-~w~~yl~~~~~~f~~~~~~~~q~~ 299 (302)
T 3hem_A 236 KVERYHRIGAN---------YVPTLNAWADALQAHKDEAIALKG--QETCD-IYMHYLRGCSDLFRDKYTDVCQFT 299 (302)
T ss_dssp EEEEEEECGGG---------HHHHHHHHHHHHHHTHHHHHHHHC--HHHHH-HHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred EEEEEEeCchh---------HHHHHHHHHHHHHHhHHHHHHHhC--HHHHH-HHHHHHHHHHHHHhCCCCeEEEEE
Confidence 98777654322 34445455444433 22234456 44443 355555555555666655555544
No 11
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.15 E-value=2.5e-10 Score=107.08 Aligned_cols=165 Identities=18% Similarity=0.187 Sum_probs=98.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..++. +.++. ..|..+|+..|+...+....-+.+. ..+. ..+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~--------la~~~------~~~~~~v~gvD~s~~ml~~A~~~~~--------~~~~--~~~ 124 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLS--------VRRNI------HHDNCKIIAIDNSPAMIERCRRHID--------AYKA--PTP 124 (261)
T ss_dssp CTTCEEEEETCTTTHHHHH--------HHHTC------CSSSCEEEEEESCHHHHHHHHHHHH--------TSCC--SSC
T ss_pred CCCCEEEEEeCCCCHHHHH--------HHHhc------CCCCCEEEEEECCHHHHHHHHHHHH--------hhcc--Cce
Confidence 3457999999999999875 33321 2356899999997643332222111 1111 123
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |+. +++.+ +|.++.|++++++++||++. .|...+|+
T Consensus 125 v~~~~---~D~~~--~~~~~~d~v~~~~~l~~~~~-------------------------------------~~~~~~l~ 162 (261)
T 4gek_A 125 VDVIE---GDIRD--IAIENASMVVLNFTLQFLEP-------------------------------------SERQALLD 162 (261)
T ss_dssp EEEEE---SCTTT--CCCCSEEEEEEESCGGGSCH-------------------------------------HHHHHHHH
T ss_pred EEEee---ccccc--ccccccccceeeeeeeecCc-------------------------------------hhHhHHHH
Confidence 3 444 35533 35567999999999999632 13345677
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHH-HcCccchhhhc----ccCccccCCCHHHHHHHHhh
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILV-SQGEIEKEKLV----AYHAHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv-~eG~i~~e~~d----~f~~P~y~ps~eEv~~~i~~ 282 (366)
.-.+-|+|||+|+++-...... ..+.+.+...+.+.. ..|. ++.+.. .........|.+|+++.+++
T Consensus 163 ~i~~~LkpGG~lii~e~~~~~~-------~~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~ 234 (261)
T 4gek_A 163 KIYQGLNPGGALVLSEKFSFED-------AKVGELLFNMHHDFKRANGY-SELEISQKRSMLENVMLTDSVETHKARLHK 234 (261)
T ss_dssp HHHHHEEEEEEEEEEEEBCCSS-------HHHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHHHHHCCCBCHHHHHHHHHH
T ss_pred HHHHHcCCCcEEEEEeccCCCC-------HHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhcccccCCCHHHHHHHHHH
Confidence 8899999999999975544332 112233333333332 2342 222211 11122345689999999999
Q ss_pred cCceEE
Q 017747 283 EGSFKL 288 (366)
Q Consensus 283 ~gsf~i 288 (366)
+| |+.
T Consensus 235 AG-F~~ 239 (261)
T 4gek_A 235 AG-FEH 239 (261)
T ss_dssp HT-CSE
T ss_pred cC-CCe
Confidence 99 864
No 12
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.15 E-value=1.3e-10 Score=104.31 Aligned_cols=161 Identities=15% Similarity=0.136 Sum_probs=101.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .++ ..+++..|+.......+-+.++ .+--
T Consensus 45 ~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~~--------------~~~~ 92 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKL--------LLA----------GRTVYGIEPSREMRMIAKEKLP--------------KEFS 92 (220)
T ss_dssp CCSEEEEECCTTSHHHHHH--------HHT----------TCEEEEECSCHHHHHHHHHHSC--------------TTCC
T ss_pred CCCeEEEeCCCCCHHHHHH--------HhC----------CCeEEEEeCCHHHHHHHHHhCC--------------CceE
Confidence 4579999999999988642 221 2688899986543222222211 0112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++.+-.++ +++|+++++.++||+.. | +...+|+.-
T Consensus 93 ~~~---~d~~~~~~~-~~fD~v~~~~~l~~~~~-~------------------------------------~~~~~l~~~ 131 (220)
T 3hnr_A 93 ITE---GDFLSFEVP-TSIDTIVSTYAFHHLTD-D------------------------------------EKNVAIAKY 131 (220)
T ss_dssp EES---CCSSSCCCC-SCCSEEEEESCGGGSCH-H------------------------------------HHHHHHHHH
T ss_pred EEe---CChhhcCCC-CCeEEEEECcchhcCCh-H------------------------------------HHHHHHHHH
Confidence 333 466554556 99999999999999744 1 113456777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||+++++.+...+. ......+..+...|.... ..-..+.++++.+++.+.+++.| |++.
T Consensus 132 ~~~LkpgG~l~i~~~~~~~~-----------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~v~ 196 (220)
T 3hnr_A 132 SQLLNKGGKIVFADTIFADQ-----------DAYDKTVEAAKQRGFHQL---ANDLQTEYYTRIPVMQTIFENNG-FHVT 196 (220)
T ss_dssp HHHSCTTCEEEEEEECBSSH-----------HHHHHHHHHHHHTTCHHH---HHHHHHSCCCBHHHHHHHHHHTT-EEEE
T ss_pred HHhcCCCCEEEEEeccccCh-----------HHHHHHHHHHHhCCCccc---hhhcchhhcCCHHHHHHHHHHCC-CEEE
Confidence 89999999999997655432 122333333334443211 11233467789999999999999 9987
Q ss_pred eEEEEeecc
Q 017747 290 QLDMFQVER 298 (366)
Q Consensus 290 ~~e~~~~~~ 298 (366)
..+.....|
T Consensus 197 ~~~~~~~~w 205 (220)
T 3hnr_A 197 FTRLNHFVW 205 (220)
T ss_dssp EEECSSSEE
T ss_pred EeeccceEE
Confidence 776544444
No 13
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.13 E-value=5.4e-10 Score=100.59 Aligned_cols=177 Identities=14% Similarity=0.134 Sum_probs=106.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCC--C
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGS--S 126 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~--~ 126 (366)
+...+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.+.. .+... .
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~~~--------~~~~~~~~ 82 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLEL--------ASK----------GYSVTGIDINSEAIRLAETAARS--------PGLNQKTG 82 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHTTC--------CSCCSSSS
T ss_pred CCCCeEEEECCCCCHHHHHH--------HhC----------CCeEEEEECCHHHHHHHHHHHHh--------cCCccccC
Confidence 45689999999999988742 221 26889999865433333222211 00000 0
Q ss_pred Cc-eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 127 PS-VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 127 ~~-~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
.+ -|.. +++..-.++++++|+++++.++|++.+. .+...+
T Consensus 83 ~~~~~~~---~d~~~~~~~~~~~D~v~~~~~l~~~~~~------------------------------------~~~~~~ 123 (235)
T 3sm3_A 83 GKAEFKV---ENASSLSFHDSSFDFAVMQAFLTSVPDP------------------------------------KERSRI 123 (235)
T ss_dssp CEEEEEE---CCTTSCCSCTTCEEEEEEESCGGGCCCH------------------------------------HHHHHH
T ss_pred cceEEEE---ecccccCCCCCceeEEEEcchhhcCCCH------------------------------------HHHHHH
Confidence 01 2333 4555545789999999999999996541 123456
Q ss_pred HHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhccc--CccccCCCHHHHHHHHhhc
Q 017747 206 LRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAY--HAHFYAPSKEEIEGEVGRE 283 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f--~~P~y~ps~eEv~~~i~~~ 283 (366)
|+.-.+-|+|||+++++.+++.... ..+.......+......|.......... ....++++.+|+.+++++.
T Consensus 124 l~~~~~~L~pgG~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~a 197 (235)
T 3sm3_A 124 IKEVFRVLKPGAYLYLVEFGQNWHL------KLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDC 197 (235)
T ss_dssp HHHHHHHEEEEEEEEEEEEBCCTTS------HHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCeEEEEEECCcchhH------HHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHc
Confidence 7778899999999999998875431 1122222233322222222111111111 2335688999999999999
Q ss_pred CceEEeeEEEEeec
Q 017747 284 GSFKLDQLDMFQVE 297 (366)
Q Consensus 284 gsf~i~~~e~~~~~ 297 (366)
| |++..++....+
T Consensus 198 G-f~~~~~~~~~~~ 210 (235)
T 3sm3_A 198 R-FEIDYFRVKELE 210 (235)
T ss_dssp T-EEEEEEEEEEEE
T ss_pred C-CEEEEEEeccee
Confidence 9 999888775544
No 14
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.12 E-value=1e-10 Score=110.48 Aligned_cols=159 Identities=14% Similarity=0.169 Sum_probs=93.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcc--eEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEF--HFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~--~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
...+|+|+|||+|..|..++..+ ..+ .|.. .++..|...++....-+.+. ...+ ..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l----~~~--------~~~~~v~~~~vD~S~~ml~~a~~~~~-------~~~~---~~ 109 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKV----QAQ--------YPGVCINNEVVEPSAEQIAKYKELVA-------KTSN---LE 109 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHH----HHH--------STTCEEEEEEECSCHHHHHHHHHHHH-------TCSS---CT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHH----Hhh--------CCCceeeEEEEeCCHHHHHHHHHHHH-------hccC---CC
Confidence 46899999999998776544443 221 1234 45899987654433322111 0000 12
Q ss_pred ceEEeccCCCcccc------cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGR------LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQED 201 (366)
Q Consensus 128 ~~f~~~vpgSFy~~------lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 201 (366)
++-+....++...- -|+++++|+++++.++||+.+.+
T Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~------------------------------------- 152 (292)
T 2aot_A 110 NVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIP------------------------------------- 152 (292)
T ss_dssp TEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHH-------------------------------------
T ss_pred cceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHH-------------------------------------
Confidence 22111112233211 25789999999999999976532
Q ss_pred HHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHh
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~ 281 (366)
.+|+.-.+-|||||++++.....+. .|. ..|..... . +.. .....+++++++.+.++
T Consensus 153 --~~l~~~~r~LkpgG~l~i~~~~~~~----------~~~---~~~~~~~~-~-~~~------~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 153 --ATLKFFHSLLGTNAKMLIIVVSGSS----------GWD---KLWKKYGS-R-FPQ------DDLCQYITSDDLTQMLD 209 (292)
T ss_dssp --HHHHHHHHTEEEEEEEEEEEECTTS----------HHH---HHHHHHGG-G-SCC------CTTCCCCCHHHHHHHHH
T ss_pred --HHHHHHHHHcCCCcEEEEEEecCCc----------cHH---HHHHHHHH-h-ccC------CCcccCCCHHHHHHHHH
Confidence 2355668899999999999765421 121 22332211 0 000 01245689999999999
Q ss_pred hcCceEEeeE
Q 017747 282 REGSFKLDQL 291 (366)
Q Consensus 282 ~~gsf~i~~~ 291 (366)
+.| |++...
T Consensus 210 ~aG-f~~~~~ 218 (292)
T 2aot_A 210 NLG-LKYECY 218 (292)
T ss_dssp HHT-CCEEEE
T ss_pred HCC-CceEEE
Confidence 999 887653
No 15
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.09 E-value=1.5e-09 Score=99.68 Aligned_cols=211 Identities=14% Similarity=0.032 Sum_probs=125.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+. .+ .+++..|+.......+-+.+. ..+.. ..-.
T Consensus 46 ~~~~vLDiG~G~G~~~~~--------l~~~--------~~-~~v~~vD~s~~~~~~a~~~~~--------~~~~~-~~~~ 99 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLF--------LADY--------VK-GQITGIDLFPDFIEIFNENAV--------KANCA-DRVK 99 (257)
T ss_dssp TTCEEEEETCTTSHHHHH--------HHHH--------CC-SEEEEEESCHHHHHHHHHHHH--------HTTCT-TTEE
T ss_pred CCCeEEEeCCCCCHHHHH--------HHHh--------CC-CeEEEEECCHHHHHHHHHHHH--------HcCCC-CceE
Confidence 457999999999999875 3232 12 388999986533222221111 11111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++..-.+|++++|+++++.++||+ . +. .+|+.-
T Consensus 100 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~-~-~~--------------------------------------~~l~~~ 136 (257)
T 3f4k_A 100 GIT---GSMDNLPFQNEELDLIWSEGAIYNI-G-FE--------------------------------------RGMNEW 136 (257)
T ss_dssp EEE---CCTTSCSSCTTCEEEEEEESCSCCC-C-HH--------------------------------------HHHHHH
T ss_pred EEE---CChhhCCCCCCCEEEEEecChHhhc-C-HH--------------------------------------HHHHHH
Confidence 443 4664444788999999999999997 2 11 235566
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++..+......+. ..+...|... .| ..++.+++.+.+++.| |++.
T Consensus 137 ~~~L~pgG~l~~~~~~~~~~~~~--------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~~v 191 (257)
T 3f4k_A 137 SKYLKKGGFIAVSEASWFTSERP--------AEIEDFWMDA---------------YP-EISVIPTCIDKMERAG-YTPT 191 (257)
T ss_dssp HTTEEEEEEEEEEEEEESSSCCC--------HHHHHHHHHH---------------CT-TCCBHHHHHHHHHHTT-EEEE
T ss_pred HHHcCCCcEEEEEEeeccCCCCh--------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CeEE
Confidence 88999999999998754332110 1233344431 12 2579999999999999 9987
Q ss_pred eEEEEe-eccCCCCcccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEeeC
Q 017747 290 QLDMFQ-VERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVLLLRKL 366 (366)
Q Consensus 290 ~~e~~~-~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~~~l~k~ 366 (366)
....+. ..|.. .+...++...+.+...+-+ +...+++.++.++....+ ......+...++.++|+
T Consensus 192 ~~~~~~~~~w~~---------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 192 AHFILPENCWTE---------HYFAPQDEVRETFMKEHAG--NKTAMDFMKGQQYERSLY-SKYKDYYGYVFYIGQKR 257 (257)
T ss_dssp EEEECCGGGTCC---------CCCHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH-HHHTTTEEEEEEEEEEC
T ss_pred EEEECChhhHHH---------HHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHH-HHhCCccceEEEEEecC
Confidence 755443 22411 1222233334444444445 566777777776666544 33345566777777775
No 16
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.08 E-value=1.3e-09 Score=99.47 Aligned_cols=144 Identities=13% Similarity=0.083 Sum_probs=94.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.+. ..+|+..|+........-+ .-
T Consensus 40 ~~~~~vLDiGcG~G~~~~~--------l~~~----------~~~v~gvD~s~~~~~~a~~------------------~~ 83 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLEL--------CKEE----------GIESIGVDINEDMIKFCEG------------------KF 83 (240)
T ss_dssp TTCSCEEEETCTTTHHHHH--------HHHH----------TCCEEEECSCHHHHHHHHT------------------TS
T ss_pred cCCCeEEEEeCCCCHHHHH--------HHhC----------CCcEEEEECCHHHHHHHHh------------------hc
Confidence 3458999999999998764 2222 1568888986432111111 11
Q ss_pred eEEeccCCCcccc--cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGR--LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~f~~~vpgSFy~~--lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
-+ +.++..+- -+|++++|+++|+.++||+.. .|+..+|
T Consensus 84 ~~---~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~-------------------------------------~~~~~~l 123 (240)
T 3dli_A 84 NV---VKSDAIEYLKSLPDKYLDGVMISHFVEHLDP-------------------------------------ERLFELL 123 (240)
T ss_dssp EE---ECSCHHHHHHTSCTTCBSEEEEESCGGGSCG-------------------------------------GGHHHHH
T ss_pred ce---eeccHHHHhhhcCCCCeeEEEECCchhhCCc-------------------------------------HHHHHHH
Confidence 12 22344432 478999999999999999742 1345567
Q ss_pred HHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 207 RSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
+.-.+-|+|||++++..++..+ ... +...+ ......++++++++.+.+++.| |
T Consensus 124 ~~~~~~LkpgG~l~~~~~~~~~----------~~~-~~~~~---------------~~~~~~~~~~~~~l~~~l~~aG-f 176 (240)
T 3dli_A 124 SLCYSKMKYSSYIVIESPNPTS----------LYS-LINFY---------------IDPTHKKPVHPETLKFILEYLG-F 176 (240)
T ss_dssp HHHHHHBCTTCCEEEEEECTTS----------HHH-HHHHT---------------TSTTCCSCCCHHHHHHHHHHHT-C
T ss_pred HHHHHHcCCCcEEEEEeCCcch----------hHH-HHHHh---------------cCccccccCCHHHHHHHHHHCC-C
Confidence 7888999999999999876432 112 11111 0112345678999999999999 9
Q ss_pred EEeeEEEEe
Q 017747 287 KLDQLDMFQ 295 (366)
Q Consensus 287 ~i~~~e~~~ 295 (366)
++...+.+.
T Consensus 177 ~~~~~~~~~ 185 (240)
T 3dli_A 177 RDVKIEFFE 185 (240)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 987777653
No 17
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.07 E-value=3.8e-10 Score=100.05 Aligned_cols=142 Identities=13% Similarity=0.047 Sum_probs=97.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+..+ .+. ..+++..|+........-+.. .+--|
T Consensus 42 ~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~~~~a~~~~---------------~~~~~ 88 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHL--------ASL----------GHQIEGLEPATRLVELARQTH---------------PSVTF 88 (203)
T ss_dssp CSCEEEETCTTCHHHHHH--------HHT----------TCCEEEECCCHHHHHHHHHHC---------------TTSEE
T ss_pred CCeEEEecCCCCHHHHHH--------Hhc----------CCeEEEEeCCHHHHHHHHHhC---------------CCCeE
Confidence 578999999999988642 221 157888898643222211111 11223
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
+. +++.+-.+|++++|+++++.++|+++. +|...+|+.-.
T Consensus 89 ~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~~~ 128 (203)
T 3h2b_A 89 HH---GTITDLSDSPKRWAGLLAWYSLIHMGP-------------------------------------GELPDALVALR 128 (203)
T ss_dssp EC---CCGGGGGGSCCCEEEEEEESSSTTCCT-------------------------------------TTHHHHHHHHH
T ss_pred Ee---CcccccccCCCCeEEEEehhhHhcCCH-------------------------------------HHHHHHHHHHH
Confidence 33 466554578899999999999999742 12345677778
Q ss_pred HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEee
Q 017747 211 EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQ 290 (366)
Q Consensus 211 ~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~ 290 (366)
+-|+|||+++++....... ..++....+.++.+.+++.+.+++.| |++..
T Consensus 129 ~~L~pgG~l~i~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~ 178 (203)
T 3h2b_A 129 MAVEDGGGLLMSFFSGPSL-----------------------------EPMYHPVATAYRWPLPELAQALETAG-FQVTS 178 (203)
T ss_dssp HTEEEEEEEEEEEECCSSC-----------------------------EEECCSSSCEEECCHHHHHHHHHHTT-EEEEE
T ss_pred HHcCCCcEEEEEEccCCch-----------------------------hhhhchhhhhccCCHHHHHHHHHHCC-CcEEE
Confidence 9999999999998766541 11222334667889999999999999 99988
Q ss_pred EEEEe
Q 017747 291 LDMFQ 295 (366)
Q Consensus 291 ~e~~~ 295 (366)
++.+.
T Consensus 179 ~~~~~ 183 (203)
T 3h2b_A 179 SHWDP 183 (203)
T ss_dssp EEECT
T ss_pred EEecC
Confidence 87654
No 18
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.07 E-value=8e-10 Score=103.51 Aligned_cols=168 Identities=15% Similarity=0.229 Sum_probs=102.2
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 48 DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 48 ~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
.+++.+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.+. ..+. .+
T Consensus 66 ~~~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~~~~a~~~~~--------~~~~--~~ 117 (285)
T 4htf_A 66 GPQKLRVLDAGGGEGQTAIKM--------AER----------GHQVILCDLSAQMIDRAKQAAE--------AKGV--SD 117 (285)
T ss_dssp CSSCCEEEEETCTTCHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHHH--------C-CC--GG
T ss_pred CCCCCEEEEeCCcchHHHHHH--------HHC----------CCEEEEEECCHHHHHHHHHHHH--------hcCC--Cc
Confidence 345689999999999988642 221 2688999986543322222111 0111 01
Q ss_pred ce-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 128 SV-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 128 ~~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++ |+. +++.+.. ++++++|+++++.++||+.+. ..+
T Consensus 118 ~v~~~~---~d~~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~ 155 (285)
T 4htf_A 118 NMQFIH---CAAQDVASHLETPVDLILFHAVLEWVADP---------------------------------------RSV 155 (285)
T ss_dssp GEEEEE---SCGGGTGGGCSSCEEEEEEESCGGGCSCH---------------------------------------HHH
T ss_pred ceEEEE---cCHHHhhhhcCCCceEEEECchhhcccCH---------------------------------------HHH
Confidence 22 333 4555444 688999999999999997431 234
Q ss_pred HHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCc
Q 017747 206 LRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGS 285 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gs 285 (366)
|+.-.+-|+|||++++........ .....+...|..+ ..+..... .....+.++.+++|+.+.+++.|
T Consensus 156 l~~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG- 223 (285)
T 4htf_A 156 LQTLWSVLRPGGVLSLMFYNAHGL--------LMHNMVAGNFDYV-QAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG- 223 (285)
T ss_dssp HHHHHHTEEEEEEEEEEEEBHHHH--------HHHHHHTTCHHHH-HTTCCCC------CCCSCCBCHHHHHHHHHHTT-
T ss_pred HHHHHHHcCCCeEEEEEEeCCchH--------HHHHHHhcCHHHH-hhhccccc--cccCCCCCCCCHHHHHHHHHHCC-
Confidence 667789999999999998766431 0111111112222 22221111 12234567789999999999999
Q ss_pred eEEeeEEEEeec
Q 017747 286 FKLDQLDMFQVE 297 (366)
Q Consensus 286 f~i~~~e~~~~~ 297 (366)
|++...+.+...
T Consensus 224 f~v~~~~~~~~~ 235 (285)
T 4htf_A 224 WQIMGKTGVRVF 235 (285)
T ss_dssp CEEEEEEEESSS
T ss_pred CceeeeeeEEEe
Confidence 999888776543
No 19
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.06 E-value=8.2e-09 Score=96.56 Aligned_cols=162 Identities=15% Similarity=0.238 Sum_probs=94.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+.. + .+|+..|+..+.....-+.+ ...+. ..++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l--------~~~~--------~-~~v~gvd~s~~~~~~a~~~~--------~~~~~--~~~~ 116 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRA--------VEKY--------D-VNVVGLTLSKNQANHVQQLV--------ANSEN--LRSK 116 (287)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHHH--------C-CEEEEEESCHHHHHHHHHHH--------HTCCC--CSCE
T ss_pred CcCEEEEECCcccHHHHHH--------HHHc--------C-CEEEEEECCHHHHHHHHHHH--------HhcCC--CCCe
Confidence 4579999999999988753 2211 1 48889998654322221111 11111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. +++ .. +| +++|+++|..++|++.. +|+..+|+.
T Consensus 117 ~~~~---~d~-~~-~~-~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 153 (287)
T 1kpg_A 117 RVLL---AGW-EQ-FD-EPVDRIVSIGAFEHFGH-------------------------------------ERYDAFFSL 153 (287)
T ss_dssp EEEE---SCG-GG-CC-CCCSEEEEESCGGGTCT-------------------------------------TTHHHHHHH
T ss_pred EEEE---CCh-hh-CC-CCeeEEEEeCchhhcCh-------------------------------------HHHHHHHHH
Confidence 333 355 22 35 89999999999999742 123445677
Q ss_pred HHHHhccCceEEEEeecCCCCCCC-CCCchhHHHHHHHHHHHHHHcCccchhhhcccCcc-ccCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHV-DRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAH-FYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~-~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~ps~eEv~~~i~~~gsf 286 (366)
-.+-|+|||++++..+...+.... ..+....+. ...+.+.+... ..| ...|+++++.+.+++.| |
T Consensus 154 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------~~~~~~~~s~~~~~~~l~~aG-f 220 (287)
T 1kpg_A 154 AHRLLPADGVMLLHTITGLHPKEIHERGLPMSFT--FARFLKFIVTE----------IFPGGRLPSIPMVQECASANG-F 220 (287)
T ss_dssp HHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHH--HHHHHHHHHHH----------TSTTCCCCCHHHHHHHHHTTT-C
T ss_pred HHHhcCCCCEEEEEEecCCCcccccccccccccc--ccchhhhHHhe----------eCCCCCCCCHHHHHHHHHhCC-c
Confidence 789999999999998876542100 000000001 11112211111 112 25679999999999999 9
Q ss_pred EEeeEEEE
Q 017747 287 KLDQLDMF 294 (366)
Q Consensus 287 ~i~~~e~~ 294 (366)
++.+.+.+
T Consensus 221 ~~~~~~~~ 228 (287)
T 1kpg_A 221 TVTRVQSL 228 (287)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 98776644
No 20
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.05 E-value=2.4e-09 Score=100.74 Aligned_cols=153 Identities=14% Similarity=0.034 Sum_probs=96.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+. +.+ ..+++..|+........-+.+ ...+. ..+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~--------~~~---------~~~v~gvD~s~~~~~~a~~~~--------~~~~~--~~~ 133 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLV--------RKF---------GVSIDCLNIAPVQNKRNEEYN--------NQAGL--ADN 133 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------HHH---------CCEEEEEESCHHHHHHHHHHH--------HHHTC--TTT
T ss_pred CCCCEEEEeCCCCCHHHHHHH--------HHh---------CCEEEEEeCCHHHHHHHHHHH--------HhcCC--Ccc
Confidence 346799999999999987532 211 158889998654322221111 01111 112
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++.+-.+|++++|++++..++||+.+ | ..+|+
T Consensus 134 ~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-~--------------------------------------~~~l~ 171 (297)
T 2o57_A 134 ITVKY---GSFLEIPCEDNSYDFIWSQDAFLHSPD-K--------------------------------------LKVFQ 171 (297)
T ss_dssp EEEEE---CCTTSCSSCTTCEEEEEEESCGGGCSC-H--------------------------------------HHHHH
T ss_pred eEEEE---cCcccCCCCCCCEeEEEecchhhhcCC-H--------------------------------------HHHHH
Confidence 2 333 477665588999999999999999754 1 13456
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++..+...+..+. . .+...+..+ ..| .+++++++.+.+++.| |+
T Consensus 172 ~~~~~LkpgG~l~~~~~~~~~~~~~----~----~~~~~~~~~--------------~~~-~~~~~~~~~~~l~~aG-f~ 227 (297)
T 2o57_A 172 ECARVLKPRGVMAITDPMKEDGIDK----S----SIQPILDRI--------------KLH-DMGSLGLYRSLAKECG-LV 227 (297)
T ss_dssp HHHHHEEEEEEEEEEEEEECTTCCG----G----GGHHHHHHH--------------TCS-SCCCHHHHHHHHHHTT-EE
T ss_pred HHHHHcCCCeEEEEEEeccCCCCch----H----HHHHHHHHh--------------cCC-CCCCHHHHHHHHHHCC-Ce
Confidence 6689999999999998766543110 1 111222211 122 3579999999999999 99
Q ss_pred EeeEEEE
Q 017747 288 LDQLDMF 294 (366)
Q Consensus 288 i~~~e~~ 294 (366)
+.+.+.+
T Consensus 228 ~~~~~~~ 234 (297)
T 2o57_A 228 TLRTFSR 234 (297)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 8776654
No 21
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.05 E-value=1.1e-09 Score=102.50 Aligned_cols=103 Identities=17% Similarity=0.235 Sum_probs=69.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+..-+|+|+|||+|..|.. +.++ -.+|+..|+..++-... . + .++
T Consensus 38 ~~~~~vLDvGcGtG~~~~~--------l~~~----------~~~v~gvD~s~~ml~~a-----------~-----~-~~~ 82 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLG--------LAEF----------FERVHAVDPGEAQIRQA-----------L-----R-HPR 82 (257)
T ss_dssp SCSSEEEEESCTTTTTHHH--------HHTT----------CSEEEEEESCHHHHHTC-----------C-----C-CTT
T ss_pred CCCCCEEEEcCCCCHHHHH--------HHHh----------CCEEEEEeCcHHhhhhh-----------h-----h-cCC
Confidence 4457899999999999874 2221 15788999864321110 0 0 223
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++.+-.+|++|+|+++++.++||+.. + .||+
T Consensus 83 v~~~~---~~~e~~~~~~~sfD~v~~~~~~h~~~~-~---------------------------------------~~~~ 119 (257)
T 4hg2_A 83 VTYAV---APAEDTGLPPASVDVAIAAQAMHWFDL-D---------------------------------------RFWA 119 (257)
T ss_dssp EEEEE---CCTTCCCCCSSCEEEEEECSCCTTCCH-H---------------------------------------HHHH
T ss_pred ceeeh---hhhhhhcccCCcccEEEEeeehhHhhH-H---------------------------------------HHHH
Confidence 3 444 466555589999999999999999731 1 2345
Q ss_pred HHHHHhccCceEEEEeecCCCC
Q 017747 208 SRSEELVVGGRMVLILLGRIGP 229 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~ 229 (366)
.-++-|||||+|++...+....
T Consensus 120 e~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 120 ELRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp HHHHHEEEEEEEEEEEECCCBC
T ss_pred HHHHHcCCCCEEEEEECCCCCC
Confidence 5578899999999998876553
No 22
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.03 E-value=5.1e-09 Score=97.06 Aligned_cols=210 Identities=13% Similarity=0.046 Sum_probs=122.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+ .+..+|+..|+.......+-+.+. ..+. .++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~l--------a~---------~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~--~~~ 97 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVL--------AG---------HVTGQVTGLDFLSGFIDIFNRNAR--------QSGL--QNR 97 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHH--------HT---------TCSSEEEEEESCHHHHHHHHHHHH--------HTTC--TTT
T ss_pred CCCCEEEEeCCCCCHHHHHH--------Hh---------ccCCEEEEEeCCHHHHHHHHHHHH--------HcCC--CcC
Confidence 34689999999999988642 11 134789999986543332222111 1111 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |+. +++.+-.+|++++|+++|+.++|++ . | ..+|+
T Consensus 98 v~~~~---~d~~~~~~~~~~fD~i~~~~~~~~~-~-~--------------------------------------~~~l~ 134 (267)
T 3kkz_A 98 VTGIV---GSMDDLPFRNEELDLIWSEGAIYNI-G-F--------------------------------------ERGLN 134 (267)
T ss_dssp EEEEE---CCTTSCCCCTTCEEEEEESSCGGGT-C-H--------------------------------------HHHHH
T ss_pred cEEEE---cChhhCCCCCCCEEEEEEcCCceec-C-H--------------------------------------HHHHH
Confidence 2 443 4564444788999999999999997 2 1 12456
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++..+........ ..+...|.+- .| .+++.+++.+.+++.| |+
T Consensus 135 ~~~~~LkpgG~l~~~~~~~~~~~~~--------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~ 189 (267)
T 3kkz_A 135 EWRKYLKKGGYLAVSECSWFTDERP--------AEINDFWMDA---------------YP-EIDTIPNQVAKIHKAG-YL 189 (267)
T ss_dssp HHGGGEEEEEEEEEEEEEESSSCCC--------HHHHHHHHHH---------------CT-TCEEHHHHHHHHHHTT-EE
T ss_pred HHHHHcCCCCEEEEEEeeecCCCCh--------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CE
Confidence 6689999999999998764332110 1233334321 12 4679999999999999 99
Q ss_pred EeeEEEEe-eccCCCCcccchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHHHHHHhcCCCcEEEEEEEee
Q 017747 288 LDQLDMFQ-VERQGHDRGESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVDEEMAKEEIKPLTFVLLLRK 365 (366)
Q Consensus 288 i~~~e~~~-~~~~~~~d~~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~~~~~~~~~~~~~~~~~l~k 365 (366)
+...+.+. ..|. ..+...+..+.+.+...+-. .+.+.++.++..+..+.. ......+...+..++|
T Consensus 190 ~v~~~~~~~~~w~---------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~y~~~~~~~f~~~~~ 256 (267)
T 3kkz_A 190 PVATFILPENCWT---------DHYFTPKVAAQKIFLTKYAG--NKIAEEFSMLQSIEEELY-HKYKEYYGYTFFIAKK 256 (267)
T ss_dssp EEEEEECCGGGTT---------TTTHHHHHHHHHHHHHHTTT--CHHHHHHHHHHHHHHHHH-HHHTTTEEEEEEEEEE
T ss_pred EEEEEECCHhHHH---------HHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHH-HHhccccCeEeehhhH
Confidence 87766543 2241 12233344444444444333 445555555555433322 2233455566666665
No 23
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.02 E-value=2.9e-09 Score=99.01 Aligned_cols=166 Identities=16% Similarity=0.170 Sum_probs=99.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.+. .|..+++..|+..+.....-+.+. ..+ .++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~--------l~~~--------~~~~~v~~vD~s~~~~~~a~~~~~--------~~~---~~~ 88 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVI--------LAKN--------NPDAEITSIDISPESLEKARENTE--------KNG---IKN 88 (276)
T ss_dssp CTTCEEEETTCTTSHHHHH--------HHHH--------CTTSEEEEEESCHHHHHHHHHHHH--------HTT---CCS
T ss_pred CCCCeEEEecCCCCHHHHH--------HHHh--------CCCCEEEEEECCHHHHHHHHHHHH--------HcC---CCC
Confidence 4568999999999998864 3232 234789999986543332222111 111 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |+. ++..+-.+|++++|+++++.++||+.+.+ .+|+
T Consensus 89 ~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~~---------------------------------------~~l~ 126 (276)
T 3mgg_A 89 VKFLQ---ANIFSLPFEDSSFDHIFVCFVLEHLQSPE---------------------------------------EALK 126 (276)
T ss_dssp EEEEE---CCGGGCCSCTTCEEEEEEESCGGGCSCHH---------------------------------------HHHH
T ss_pred cEEEE---cccccCCCCCCCeeEEEEechhhhcCCHH---------------------------------------HHHH
Confidence 2 333 46666668899999999999999975521 2355
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++......+..... ......+.. ..+..+... ......+.+++..++++.| |+
T Consensus 127 ~~~~~L~pgG~l~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~l~~~l~~aG-f~ 191 (276)
T 3mgg_A 127 SLKKVLKPGGTITVIEGDHGSCYFHP-EGKKAIEAW-NCLIRVQAY------------MKGNSLVGRQIYPLLQESG-FE 191 (276)
T ss_dssp HHHHHEEEEEEEEEEEECGGGCEEES-CCHHHHHHH-HHHHHHHHH------------TTCCTTGGGGHHHHHHHTT-CE
T ss_pred HHHHHcCCCcEEEEEEcCCCCceECC-CcHHHHHHH-HHHHHHHHh------------cCCCcchHHHHHHHHHHCC-CC
Confidence 66789999999999876553321000 111111211 111211110 0112236689999999999 99
Q ss_pred EeeEEEEeecc
Q 017747 288 LDQLDMFQVER 298 (366)
Q Consensus 288 i~~~e~~~~~~ 298 (366)
+.+++....+.
T Consensus 192 ~v~~~~~~~~~ 202 (276)
T 3mgg_A 192 KIRVEPRMVYI 202 (276)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEeeEEEEC
Confidence 98888765543
No 24
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.01 E-value=4e-09 Score=93.90 Aligned_cols=157 Identities=11% Similarity=0.068 Sum_probs=93.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+++..|+........- . .+ ..++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l--------~~~----------~~~v~~~D~s~~~~~~a~-----------~-~~---~~~~ 92 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHL--------SGL----------ADRVTALDGSAEMIAEAG-----------R-HG---LDNV 92 (218)
T ss_dssp SCSEEEEESCTTSHHHHHH--------HHH----------SSEEEEEESCHHHHHHHG-----------G-GC---CTTE
T ss_pred CCCeEEEECCCCCHHHHHH--------Hhc----------CCeEEEEeCCHHHHHHHH-----------h-cC---CCCe
Confidence 3469999999999988753 221 167888888643221111 1 11 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+. +++.+ ++|++++|+++++.++||+.. .++..+|+.
T Consensus 93 ~~~~---~d~~~-~~~~~~~D~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 131 (218)
T 3ou2_A 93 EFRQ---QDLFD-WTPDRQWDAVFFAHWLAHVPD-------------------------------------DRFEAFWES 131 (218)
T ss_dssp EEEE---CCTTS-CCCSSCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred EEEe---ccccc-CCCCCceeEEEEechhhcCCH-------------------------------------HHHHHHHHH
Confidence 333 45644 489999999999999999643 124456777
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchh-hhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKE-KLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e-~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
-.+-|+|||+++++..++.... +...+.....+.....- .-..+.....+++++|+.+.+++.| |+
T Consensus 132 ~~~~L~pgG~l~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~ 198 (218)
T 3ou2_A 132 VRSAVAPGGVVEFVDVTDHERR------------LEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALG-WS 198 (218)
T ss_dssp HHHHEEEEEEEEEEEECCCC------------------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTT-EE
T ss_pred HHHHcCCCeEEEEEeCCCCccc------------cchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCC-CE
Confidence 8899999999999998874321 11111110001000000 0001112234789999999999999 99
Q ss_pred EeeEEE
Q 017747 288 LDQLDM 293 (366)
Q Consensus 288 i~~~e~ 293 (366)
++..+.
T Consensus 199 v~~~~~ 204 (218)
T 3ou2_A 199 CSVDEV 204 (218)
T ss_dssp EEEEEE
T ss_pred EEeeec
Confidence 876665
No 25
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.99 E-value=1.6e-09 Score=100.54 Aligned_cols=194 Identities=14% Similarity=0.147 Sum_probs=112.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+. + +..+|+..|+....... ... . .+-
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~--------~----------~~~~v~gvD~s~~~~~~-----------a~~----~-~~~ 78 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALA--------N----------QGLFVYAVEPSIVMRQQ-----------AVV----H-PQV 78 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHH--------T----------TTCEEEEECSCHHHHHS-----------SCC----C-TTE
T ss_pred CCCCEEEEEcCcccHHHHHHH--------h----------CCCEEEEEeCCHHHHHH-----------HHh----c-cCC
Confidence 356899999999999886421 1 23789999986421110 000 0 111
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.|.. +++.+-.+|++++|++++..++||+.+ +..+|+.
T Consensus 79 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------------~~~~l~~ 116 (261)
T 3ege_A 79 EWFT---GYAENLALPDKSVDGVISILAIHHFSH---------------------------------------LEKSFQE 116 (261)
T ss_dssp EEEC---CCTTSCCSCTTCBSEEEEESCGGGCSS---------------------------------------HHHHHHH
T ss_pred EEEE---CchhhCCCCCCCEeEEEEcchHhhccC---------------------------------------HHHHHHH
Confidence 2333 466554478999999999999999733 2234566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+ ||++++.......... .+..+.+..... ....++++.+++. .+++.| |++
T Consensus 117 ~~~~Lk-gG~~~~~~~~~~~~~~-----~~~~~~~~~~~~----------------~~~~~~~~~~~~~-~l~~aG-F~~ 172 (261)
T 3ege_A 117 MQRIIR-DGTIVLLTFDIRLAQR-----IWLYDYFPFLWE----------------DALRFLPLDEQIN-LLQENT-KRR 172 (261)
T ss_dssp HHHHBC-SSCEEEEEECGGGCCC-----CGGGGTCHHHHH----------------HHHTSCCHHHHHH-HHHHHH-CSE
T ss_pred HHHHhC-CcEEEEEEcCCchhHH-----HHHHHHHHHHhh----------------hhhhhCCCHHHHH-HHHHcC-CCc
Confidence 789999 9999888876543211 111111111111 1123577899999 999999 988
Q ss_pred eeEEEEeeccCCC---Ccc--cchhhhHhhhHHHhhhhHHHhhcCCCcchHHHHHHHHHHHHH
Q 017747 289 DQLDMFQVERQGH---DRG--ESYGSAVARTVRAIQESTIIHHFGIGEGVLDNLFEIYGRLVD 346 (366)
Q Consensus 289 ~~~e~~~~~~~~~---~d~--~~~~~~~~~~~Ra~~e~~l~~~~g~~~~i~d~lf~r~~~~~~ 346 (366)
.+.+.+..++... .+. ...+..+-...+...+. + +.+. ++.++.+.+++.+.+.
T Consensus 173 v~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~--~~e~~~~~~~~~~~l~ 231 (261)
T 3ege_A 173 VEAIPFLLPHDLSDLFAAAAWRRPELYLKAEVRAGISS-F-ALAN--QDLVEKGLELLTADLN 231 (261)
T ss_dssp EEEEECCEETTCSBCCTTTTTTCGGGGGSHHHHHTSHH-H-HHSC--HHHHHHHHHHHHHHHH
T ss_pred eeEEEecCCCcCcchhhHHhccCchhhcCcchhccccc-e-eecC--HHHHHHHHHHHHHHHh
Confidence 8888876664332 111 11111111122222221 2 3345 6667777777766554
No 26
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.98 E-value=1.4e-09 Score=100.29 Aligned_cols=156 Identities=16% Similarity=0.198 Sum_probs=96.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .++ . .+++..|+........-+.+ ...+ .+++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l--------~~~--------~--~~v~gvD~s~~~l~~a~~~~--------~~~~---~~~v 87 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAF--------APF--------V--KKVVAFDLTEDILKVARAFI--------EGNG---HQQV 87 (260)
T ss_dssp SCCEEEEETCTTCHHHHHH--------GGG--------S--SEEEEEESCHHHHHHHHHHH--------HHTT---CCSE
T ss_pred CCCEEEEEeCCCCHHHHHH--------HHh--------C--CEEEEEeCCHHHHHHHHHHH--------HhcC---CCce
Confidence 4689999999999988642 111 1 38899998654322221111 1111 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. +++.+-.+|++++|+++|+.++||+.+.+ .+|+.
T Consensus 88 ~~~~---~d~~~l~~~~~~fD~V~~~~~l~~~~d~~---------------------------------------~~l~~ 125 (260)
T 1vl5_A 88 EYVQ---GDAEQMPFTDERFHIVTCRIAAHHFPNPA---------------------------------------SFVSE 125 (260)
T ss_dssp EEEE---CCC-CCCSCTTCEEEEEEESCGGGCSCHH---------------------------------------HHHHH
T ss_pred EEEE---ecHHhCCCCCCCEEEEEEhhhhHhcCCHH---------------------------------------HHHHH
Confidence 333 46655558899999999999999975421 24566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++......+. ...+.....+..+. + .......+.+++.+.+++.| |++
T Consensus 126 ~~r~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~l~~aG-f~~ 184 (260)
T 1vl5_A 126 AYRVLKKGGQLLLVDNSAPEN--------DAFDVFYNYVEKER----------D--YSHHRAWKKSDWLKMLEEAG-FEL 184 (260)
T ss_dssp HHHHEEEEEEEEEEEEEBCSS--------HHHHHHHHHHHHHH----------C--TTCCCCCBHHHHHHHHHHHT-CEE
T ss_pred HHHHcCCCCEEEEEEcCCCCC--------HHHHHHHHHHHHhc----------C--ccccCCCCHHHHHHHHHHCC-CeE
Confidence 689999999999986654332 11221222222110 1 11234568999999999999 998
Q ss_pred eeEEEEeec
Q 017747 289 DQLDMFQVE 297 (366)
Q Consensus 289 ~~~e~~~~~ 297 (366)
..++.+..+
T Consensus 185 ~~~~~~~~~ 193 (260)
T 1vl5_A 185 EELHCFHKT 193 (260)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEeecc
Confidence 888776544
No 27
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.95 E-value=2e-09 Score=98.45 Aligned_cols=157 Identities=17% Similarity=0.200 Sum_probs=96.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+ .+. . .+++..|+.......+-+.+. ..+ .++
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l--------~~~--------~--~~v~~vD~s~~~~~~a~~~~~--------~~~---~~~ 70 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAF--------SPY--------V--QECIGVDATKEMVEVASSFAQ--------EKG---VEN 70 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHH--------GGG--------S--SEEEEEESCHHHHHHHHHHHH--------HHT---CCS
T ss_pred CCCCEEEEEccCcCHHHHHH--------HHh--------C--CEEEEEECCHHHHHHHHHHHH--------HcC---CCC
Confidence 45689999999999988642 111 1 378888986533222211111 111 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++..-.++++++|+++++.++||+.+. ..+|+
T Consensus 71 v~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~ 108 (239)
T 1xxl_A 71 VRFQQ---GTAESLPFPDDSFDIITCRYAAHHFSDV---------------------------------------RKAVR 108 (239)
T ss_dssp EEEEE---CBTTBCCSCTTCEEEEEEESCGGGCSCH---------------------------------------HHHHH
T ss_pred eEEEe---cccccCCCCCCcEEEEEECCchhhccCH---------------------------------------HHHHH
Confidence 2 333 4564544788999999999999997542 13456
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++......+. ...+.+...+..+ . +. ......+.+++.+.+++.| |+
T Consensus 109 ~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~-~---------~~--~~~~~~~~~~~~~ll~~aG-f~ 167 (239)
T 1xxl_A 109 EVARVLKQDGRFLLVDHYAPED--------PVLDEFVNHLNRL-R---------DP--SHVRESSLSEWQAMFSANQ-LA 167 (239)
T ss_dssp HHHHHEEEEEEEEEEEECBCSS--------HHHHHHHHHHHHH-H---------CT--TCCCCCBHHHHHHHHHHTT-EE
T ss_pred HHHHHcCCCcEEEEEEcCCCCC--------hhHHHHHHHHHHh-c---------cc--cccCCCCHHHHHHHHHHCC-Cc
Confidence 6688999999999987654331 1122222222211 0 11 1134468999999999999 99
Q ss_pred EeeEEEEeec
Q 017747 288 LDQLDMFQVE 297 (366)
Q Consensus 288 i~~~e~~~~~ 297 (366)
+..++.+..+
T Consensus 168 ~~~~~~~~~~ 177 (239)
T 1xxl_A 168 YQDIQKWNLP 177 (239)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEeecCc
Confidence 8887776544
No 28
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.92 E-value=1.1e-08 Score=92.77 Aligned_cols=143 Identities=13% Similarity=0.132 Sum_probs=95.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
+.+|+|+|||+|..+..+ . .+..+|+..|+.......+-+.+... +. ..++
T Consensus 67 ~~~vLDiGcG~G~~~~~l--------~----------~~~~~v~gvD~s~~~~~~a~~~~~~~--------~~--~~~v~ 118 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAM--------A----------SPERFVVGLDISESALAKANETYGSS--------PK--AEYFS 118 (235)
T ss_dssp CEEEEEETCTTCHHHHHH--------C----------BTTEEEEEECSCHHHHHHHHHHHTTS--------GG--GGGEE
T ss_pred CCCEEEeCCCCCHHHHHH--------H----------hCCCeEEEEECCHHHHHHHHHHhhcc--------CC--CcceE
Confidence 469999999999998742 1 12378999998654333332222110 00 0122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+ +.|++++|+++++.++||++. .|...+|+.-
T Consensus 119 ~~~---~d~~~-~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~~ 157 (235)
T 3lcc_A 119 FVK---EDVFT-WRPTELFDLIFDYVFFCAIEP-------------------------------------EMRPAWAKSM 157 (235)
T ss_dssp EEC---CCTTT-CCCSSCEEEEEEESSTTTSCG-------------------------------------GGHHHHHHHH
T ss_pred EEE---Cchhc-CCCCCCeeEEEEChhhhcCCH-------------------------------------HHHHHHHHHH
Confidence 333 46643 557789999999999999741 1234567777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++........ ...|.+..+.+++...+++.| |++.
T Consensus 158 ~~~LkpgG~l~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~ 202 (235)
T 3lcc_A 158 YELLKPDGELITLMYPITDH----------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAV 202 (235)
T ss_dssp HHHEEEEEEEEEEECCCSCC----------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEE
T ss_pred HHHCCCCcEEEEEEeccccc----------------------------------CCCCCccCCHHHHHHHHHHcC-CeEE
Confidence 89999999999977544321 112445579999999999999 9998
Q ss_pred eEEEEeec
Q 017747 290 QLDMFQVE 297 (366)
Q Consensus 290 ~~e~~~~~ 297 (366)
.++.....
T Consensus 203 ~~~~~~~~ 210 (235)
T 3lcc_A 203 SVEENPHA 210 (235)
T ss_dssp EEEECTTC
T ss_pred EEEecCCc
Confidence 88776544
No 29
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.92 E-value=5.3e-09 Score=95.81 Aligned_cols=149 Identities=14% Similarity=0.036 Sum_probs=90.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+.. ..+++..|+........-+... ..+. ..++
T Consensus 36 ~~~~VLDiGcG~G~~~~~l--------a~~~---------~~~v~gvD~s~~~l~~a~~~~~--------~~~~--~~~v 88 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTW--------ARDH---------GITGTGIDMSSLFTAQAKRRAE--------ELGV--SERV 88 (256)
T ss_dssp TTCEEEEETCTTCHHHHHH--------HHHT---------CCEEEEEESCHHHHHHHHHHHH--------HTTC--TTTE
T ss_pred CCCEEEEECCCCCHHHHHH--------HHhc---------CCeEEEEeCCHHHHHHHHHHHH--------hcCC--Ccce
Confidence 4579999999999988753 2221 1578889986533222211111 1111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. +++.+-.+ ++++|+++|..++|++.+.+ .+|+.
T Consensus 89 ~~~~---~d~~~~~~-~~~fD~V~~~~~~~~~~~~~---------------------------------------~~l~~ 125 (256)
T 1nkv_A 89 HFIH---NDAAGYVA-NEKCDVAACVGATWIAGGFA---------------------------------------GAEEL 125 (256)
T ss_dssp EEEE---SCCTTCCC-SSCEEEEEEESCGGGTSSSH---------------------------------------HHHHH
T ss_pred EEEE---CChHhCCc-CCCCCEEEECCChHhcCCHH---------------------------------------HHHHH
Confidence 333 46654334 88999999999999976421 23455
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.......... . +.+...|. ......+++.+++.+.+++.| |++
T Consensus 126 ~~r~LkpgG~l~~~~~~~~~~~~-----~---~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~aG-f~~ 181 (256)
T 1nkv_A 126 LAQSLKPGGIMLIGEPYWRQLPA-----T---EEIAQACG---------------VSSTSDFLTLPGLVGAFDDLG-YDV 181 (256)
T ss_dssp HTTSEEEEEEEEEEEEEETTCCS-----S---HHHHHTTT---------------CSCGGGSCCHHHHHHHHHTTT-BCC
T ss_pred HHHHcCCCeEEEEecCcccCCCC-----h---HHHHHHHh---------------cccccccCCHHHHHHHHHHCC-Cee
Confidence 58899999999998764432210 0 01111111 011236789999999999999 887
Q ss_pred eeEE
Q 017747 289 DQLD 292 (366)
Q Consensus 289 ~~~e 292 (366)
..+.
T Consensus 182 ~~~~ 185 (256)
T 1nkv_A 182 VEMV 185 (256)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 6544
No 30
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.92 E-value=4e-09 Score=95.42 Aligned_cols=154 Identities=16% Similarity=0.165 Sum_probs=93.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+ .. .+++..|+........-+..+ .+--
T Consensus 42 ~~~~vLDiGcG~G~~~~~--------l~~--------~~--~~v~gvD~s~~~~~~a~~~~~--------------~~v~ 89 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSR--------LQE--------HF--NDITCVEASEEAISHAQGRLK--------------DGIT 89 (250)
T ss_dssp CSSCEEEESCTTSHHHHH--------HTT--------TC--SCEEEEESCHHHHHHHHHHSC--------------SCEE
T ss_pred CCCcEEEECCCCCHHHHH--------HHH--------hC--CcEEEEeCCHHHHHHHHHhhh--------------CCeE
Confidence 356899999999998864 211 11 368888886532222211111 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++ ..++|++++|+++++.++|++.+. ..+|+.-
T Consensus 90 ~~~---~d~-~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~~ 126 (250)
T 2p7i_A 90 YIH---SRF-EDAQLPRRYDNIVLTHVLEHIDDP---------------------------------------VALLKRI 126 (250)
T ss_dssp EEE---SCG-GGCCCSSCEEEEEEESCGGGCSSH---------------------------------------HHHHHHH
T ss_pred EEE---ccH-HHcCcCCcccEEEEhhHHHhhcCH---------------------------------------HHHHHHH
Confidence 333 355 344789999999999999997541 1345566
Q ss_pred H-HHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhh----hcccCccccCCCHHHHHHHHhhcC
Q 017747 210 S-EELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEK----LVAYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 210 a-~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~----~d~f~~P~y~ps~eEv~~~i~~~g 284 (366)
. +-|+|||+++++.+.... ...... . ..|.+.... .+....-..+.+++++.+.+++.|
T Consensus 127 ~~~~LkpgG~l~i~~~~~~~----------~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 190 (250)
T 2p7i_A 127 NDDWLAEGGRLFLVCPNANA----------VSRQIA-V-----KMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG 190 (250)
T ss_dssp HHTTEEEEEEEEEEEECTTC----------HHHHHH-H-----HTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT
T ss_pred HHHhcCCCCEEEEEcCChHH----------HHHHHH-H-----HcCccccchhcccccccccccccCCHHHHHHHHHHCC
Confidence 7 899999999999865532 111111 1 122222110 000111124579999999999999
Q ss_pred ceEEeeEEEEe
Q 017747 285 SFKLDQLDMFQ 295 (366)
Q Consensus 285 sf~i~~~e~~~ 295 (366)
|++.+.+.+.
T Consensus 191 -f~~~~~~~~~ 200 (250)
T 2p7i_A 191 -LQVTYRSGIF 200 (250)
T ss_dssp -CEEEEEEEEE
T ss_pred -CeEEEEeeeE
Confidence 9998776543
No 31
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.91 E-value=2e-08 Score=90.98 Aligned_cols=150 Identities=21% Similarity=0.226 Sum_probs=96.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.. .. .+-
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~------------~~-~~~ 100 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKL--------SRT----------GYKAVGVDISEVMIQKGKERG------------EG-PDL 100 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHTTT------------CB-TTE
T ss_pred CCCCeEEEEcCCCCHHHHHH--------HHc----------CCeEEEEECCHHHHHHHHhhc------------cc-CCc
Confidence 34679999999999988642 221 267888898643222111111 00 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.|+. +++.+-.+|++++|+++++.++||+.+. ..+|+.
T Consensus 101 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~ 138 (242)
T 3l8d_A 101 SFIK---GDLSSLPFENEQFEAIMAINSLEWTEEP---------------------------------------LRALNE 138 (242)
T ss_dssp EEEE---CBTTBCSSCTTCEEEEEEESCTTSSSCH---------------------------------------HHHHHH
T ss_pred eEEE---cchhcCCCCCCCccEEEEcChHhhccCH---------------------------------------HHHHHH
Confidence 2343 3555555789999999999999997331 134566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||+++++..+...... ...+. ............+++++...+++.| |++
T Consensus 139 ~~~~L~pgG~l~i~~~~~~~~~~------------~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~ 194 (242)
T 3l8d_A 139 IKRVLKSDGYACIAILGPTAKPR------------ENSYP-----------RLYGKDVVCNTMMPWEFEQLVKEQG-FKV 194 (242)
T ss_dssp HHHHEEEEEEEEEEEECTTCGGG------------GGGGG-----------GGGTCCCSSCCCCHHHHHHHHHHTT-EEE
T ss_pred HHHHhCCCeEEEEEEcCCcchhh------------hhhhh-----------hhccccccccCCCHHHHHHHHHHcC-CEE
Confidence 78999999999999976654210 00000 0112233556789999999999999 999
Q ss_pred eeEEEEe
Q 017747 289 DQLDMFQ 295 (366)
Q Consensus 289 ~~~e~~~ 295 (366)
.+.+.+.
T Consensus 195 ~~~~~~~ 201 (242)
T 3l8d_A 195 VDGIGVY 201 (242)
T ss_dssp EEEEEEE
T ss_pred EEeeccc
Confidence 7776553
No 32
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.90 E-value=7.3e-09 Score=94.67 Aligned_cols=144 Identities=17% Similarity=0.184 Sum_probs=92.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. ++ + ..+++..|+.......+-+.+.. ..++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~--------~~-----~----~~~v~~vD~s~~~~~~a~~~~~~-------------~~~~ 142 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLL--------TK-----L----YATTDLLEPVKHMLEEAKRELAG-------------MPVG 142 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTH--------HH-----H----CSEEEEEESCHHHHHHHHHHTTT-------------SSEE
T ss_pred CCCEEEEECCCcCHHHHHHH--------Hh-----h----cCEEEEEeCCHHHHHHHHHHhcc-------------CCce
Confidence 46899999999999887532 21 1 14688888764322222221110 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. +++..-.+|++++|+++++.++|+++. .|+..+|+.
T Consensus 143 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 182 (254)
T 1xtp_A 143 KFIL---ASMETATLPPNTYDLIVIQWTAIYLTD-------------------------------------ADFVKFFKH 182 (254)
T ss_dssp EEEE---SCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred EEEE---ccHHHCCCCCCCeEEEEEcchhhhCCH-------------------------------------HHHHHHHHH
Confidence 333 466554578899999999999999632 245567788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++......... .+ .....+.+.++.+++++.+++.| |++
T Consensus 183 ~~~~LkpgG~l~i~~~~~~~~~-------~~----------------------~~~~~~~~~~~~~~~~~~l~~aG-f~~ 232 (254)
T 1xtp_A 183 CQQALTPNGYIFFKENCSTGDR-------FL----------------------VDKEDSSLTRSDIHYKRLFNESG-VRV 232 (254)
T ss_dssp HHHHEEEEEEEEEEEEBC--CC-------EE----------------------EETTTTEEEBCHHHHHHHHHHHT-CCE
T ss_pred HHHhcCCCeEEEEEecCCCccc-------ce----------------------ecccCCcccCCHHHHHHHHHHCC-CEE
Confidence 8899999999999875332110 00 00122345679999999999999 988
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.+.+.
T Consensus 233 ~~~~~ 237 (254)
T 1xtp_A 233 VKEAF 237 (254)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 66654
No 33
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.90 E-value=2.2e-08 Score=94.31 Aligned_cols=159 Identities=16% Similarity=0.126 Sum_probs=96.0
Q ss_pred CceEEEeecCCC---CcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCC
Q 017747 50 KTINIADLGCSS---GPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSS 126 (366)
Q Consensus 50 ~~~~IaDlGCs~---G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~ 126 (366)
...+|+|+|||+ |..+.. +.+. .|..+|+..|+....-...-+.+. .. .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~--------~~~~--------~p~~~v~~vD~sp~~l~~Ar~~~~-----------~~-~ 128 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEV--------AQSV--------NPDARVVYVDIDPMVLTHGRALLA-----------KD-P 128 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHH--------HHHH--------CTTCEEEEEESSHHHHHHHHHHHT-----------TC-T
T ss_pred CCCEEEEECCCCCCCChHHHH--------HHHh--------CCCCEEEEEECChHHHHHHHHhcC-----------CC-C
Confidence 347999999999 954421 2222 245899999986433222221111 10 1
Q ss_pred CceEEeccCCCccc-----------ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHH
Q 017747 127 PSVYIAGYPGSFYG-----------RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYF 195 (366)
Q Consensus 127 ~~~f~~~vpgSFy~-----------~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~ 195 (366)
+-.|+. +++.+ ..++.+++|+++++.++||+++-
T Consensus 129 ~v~~~~---~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~-------------------------------- 173 (274)
T 2qe6_A 129 NTAVFT---ADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD-------------------------------- 173 (274)
T ss_dssp TEEEEE---CCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT--------------------------------
T ss_pred CeEEEE---eeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcH--------------------------------
Confidence 223444 46643 23565789999999999998652
Q ss_pred HHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHH
Q 017747 196 KQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEE 275 (366)
Q Consensus 196 ~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eE 275 (366)
+...+|+.-++-|+|||+|+++.+..+. + . .++.+...+.. . ..|.++++.+|
T Consensus 174 -----~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~-----~-~~~~~~~~~~~---~-----------~~~~~~~s~~e 226 (274)
T 2qe6_A 174 -----VVDRVVGAYRDALAPGSYLFMTSLVDTG--L-----P-AQQKLARITRE---N-----------LGEGWARTPEE 226 (274)
T ss_dssp -----THHHHHHHHHHHSCTTCEEEEEEEBCSS--C-----H-HHHHHHHHHHH---H-----------HSCCCCBCHHH
T ss_pred -----HHHHHHHHHHHhCCCCcEEEEEEecCcc--h-----H-HHHHHHHHHHh---c-----------CCCCccCCHHH
Confidence 1223466778899999999999987642 1 0 11222222221 1 13678899999
Q ss_pred HHHHHhhcCceEEeeEEEEe-eccCCC
Q 017747 276 IEGEVGREGSFKLDQLDMFQ-VERQGH 301 (366)
Q Consensus 276 v~~~i~~~gsf~i~~~e~~~-~~~~~~ 301 (366)
+.+.+ .| |++....... ..|.+.
T Consensus 227 i~~~l--~G-~~l~~~g~~~~~~w~p~ 250 (274)
T 2qe6_A 227 IERQF--GD-FELVEPGVVYTALWRPD 250 (274)
T ss_dssp HHHTT--TT-CEECTTCSEEGGGSSCS
T ss_pred HHHHh--CC-CeEccCcEeccccccCC
Confidence 99999 47 8876644433 236554
No 34
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.90 E-value=3.7e-09 Score=94.74 Aligned_cols=151 Identities=7% Similarity=0.060 Sum_probs=92.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcC-----C
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERG-----G 123 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~-----~ 123 (366)
+...+|+|+|||+|.++.. +.++ | .+|+..|+....-....+....... . ...+ .
T Consensus 21 ~~~~~vLD~GCG~G~~~~~--------la~~-----g-----~~V~gvD~S~~~l~~a~~~~~~~~~-~-~~~~~~~~~~ 80 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSW--------LSGQ-----G-----YHVVGAELSEAAVERYFTERGEQPH-I-TSQGDFKVYA 80 (203)
T ss_dssp CTTCEEEETTTCCSHHHHH--------HHHH-----C-----CEEEEEEECHHHHHHHHHHHCSCSE-E-EEETTEEEEE
T ss_pred CCCCEEEEeCCCCcHhHHH--------HHHC-----C-----CeEEEEeCCHHHHHHHHHHccCCcc-c-cccccccccc
Confidence 3468999999999999875 3222 1 6899999987654443322110000 0 0000 0
Q ss_pred CCCCceEEeccCCCcccccCCC-CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHH
Q 017747 124 GSSPSVYIAGYPGSFYGRLFPN-NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDF 202 (366)
Q Consensus 124 ~~~~~~f~~~vpgSFy~~lfp~-~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~ 202 (366)
. .+--|.. +++.+-.+++ +++|++++..++|++.. .|.
T Consensus 81 ~-~~v~~~~---~d~~~l~~~~~~~fD~v~~~~~l~~l~~-------------------------------------~~~ 119 (203)
T 1pjz_A 81 A-PGIEIWC---GDFFALTARDIGHCAAFYDRAAMIALPA-------------------------------------DMR 119 (203)
T ss_dssp C-SSSEEEE---ECCSSSTHHHHHSEEEEEEESCGGGSCH-------------------------------------HHH
T ss_pred C-CccEEEE---CccccCCcccCCCEEEEEECcchhhCCH-------------------------------------HHH
Confidence 0 1123444 3664443444 79999999999999631 123
Q ss_pred HHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhh
Q 017747 203 TLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 203 ~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~ 282 (366)
..+|+.-++-|+|||++++.....+.. ...-|.+..+.+|+++.++.
T Consensus 120 ~~~l~~~~r~LkpgG~~~l~~~~~~~~---------------------------------~~~~~~~~~~~~el~~~~~~ 166 (203)
T 1pjz_A 120 ERYVQHLEALMPQACSGLLITLEYDQA---------------------------------LLEGPPFSVPQTWLHRVMSG 166 (203)
T ss_dssp HHHHHHHHHHSCSEEEEEEEEESSCSS---------------------------------SSSSCCCCCCHHHHHHTSCS
T ss_pred HHHHHHHHHHcCCCcEEEEEEEecCcc---------------------------------ccCCCCCCCCHHHHHHHhcC
Confidence 456677789999999966665432210 01123345789999999998
Q ss_pred cCceEEeeEEEEe
Q 017747 283 EGSFKLDQLDMFQ 295 (366)
Q Consensus 283 ~gsf~i~~~e~~~ 295 (366)
| |++..++...
T Consensus 167 -g-f~i~~~~~~~ 177 (203)
T 1pjz_A 167 -N-WEVTKVGGQD 177 (203)
T ss_dssp -S-EEEEEEEESS
T ss_pred -C-cEEEEecccc
Confidence 7 9987777644
No 35
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.90 E-value=8.5e-08 Score=88.78 Aligned_cols=168 Identities=7% Similarity=0.002 Sum_probs=95.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC------chhHHHhhCchhHHHHhhhcCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN------DFNSVFKALPDFHRQLRNERGG 123 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N------DFn~lf~~l~~~~~~~~~~~~~ 123 (366)
...+|+|+|||+|..+..+ .++. .|..+++..|+... .....-+.+. . .+.
T Consensus 43 ~~~~vLDiGcG~G~~~~~l--------~~~~-------g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~-------~-~~~ 99 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVL--------ADQV-------GSSGHVTGIDIASPDYGAPLTLGQAWNHLL-------A-GPL 99 (275)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHHH-------CTTCEEEEECSSCTTCCSSSCHHHHHHHHH-------T-STT
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHHh-------CCCCEEEEEECCccccccHHHHHHHHHHHH-------h-cCC
Confidence 4579999999999998753 2221 23478999999764 3332222111 0 010
Q ss_pred CCCCceEEeccCCC-cc--cccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHH
Q 017747 124 GSSPSVYIAGYPGS-FY--GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQE 200 (366)
Q Consensus 124 ~~~~~~f~~~vpgS-Fy--~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 200 (366)
..++-+ +.++ +. ...++++++|+++|+.++|++.+..
T Consensus 100 --~~~v~~--~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~------------------------------------ 139 (275)
T 3bkx_A 100 --GDRLTV--HFNTNLSDDLGPIADQHFDRVVLAHSLWYFASAN------------------------------------ 139 (275)
T ss_dssp --GGGEEE--ECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHH------------------------------------
T ss_pred --CCceEE--EECChhhhccCCCCCCCEEEEEEccchhhCCCHH------------------------------------
Confidence 012322 2233 43 2236789999999999999975421
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHH
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEV 280 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i 280 (366)
.+++...+-++|||++++.........+. ....++..+...+-... ..+.......++|++++.+.+
T Consensus 140 ---~~~~~~~~l~~~gG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~s~~~l~~~l 206 (275)
T 3bkx_A 140 ---ALALLFKNMAAVCDHVDVAEWSMQPTALD--QIGHLQAAMIQGLLYAI--------APSDVANIRTLITPDTLAQIA 206 (275)
T ss_dssp ---HHHHHHHHHTTTCSEEEEEEECSSCSSGG--GHHHHHHHHHHHHHHHH--------SCCTTCSCCCCCCHHHHHHHH
T ss_pred ---HHHHHHHHHhCCCCEEEEEEecCCCCchh--hhhHHHHHHHHHHHhhc--------cccccccccccCCHHHHHHHH
Confidence 12333344455699999998776543211 11111221211111110 011223344689999999999
Q ss_pred hhcCceEEeeEEEE
Q 017747 281 GREGSFKLDQLDMF 294 (366)
Q Consensus 281 ~~~gsf~i~~~e~~ 294 (366)
++.| |++.+.+.+
T Consensus 207 ~~aG-f~~~~~~~~ 219 (275)
T 3bkx_A 207 HDNT-WTYTAGTIV 219 (275)
T ss_dssp HHHT-CEEEECCCB
T ss_pred HHCC-CeeEEEEEe
Confidence 9999 999777766
No 36
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.89 E-value=2.5e-08 Score=89.19 Aligned_cols=145 Identities=16% Similarity=0.155 Sum_probs=94.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+ .+.. .|..+++..|+.......+-+.+. . .+ ..+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l--------~~~~-------~~~~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~ 89 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYL--------SKMV-------GEKGKVYAIDVQEEMVNYAWEKVN-------K-LG---LKN 89 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHH--------HHHH-------TTTCEEEEEESCHHHHHHHHHHHH-------H-HT---CTT
T ss_pred CCCCEEEEEecCCCHHHHHH--------HHHh-------CCCcEEEEEECCHHHHHHHHHHHH-------H-cC---CCc
Confidence 34579999999999998753 2221 234789999986543332222111 1 11 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++..-.++++++|+++++.++||+.+. ..+|+
T Consensus 90 ~~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~ 127 (219)
T 3dh0_A 90 VEVLK---SEENKIPLPDNTVDFIFMAFTFHELSEP---------------------------------------LKFLE 127 (219)
T ss_dssp EEEEE---CBTTBCSSCSSCEEEEEEESCGGGCSSH---------------------------------------HHHHH
T ss_pred EEEEe---cccccCCCCCCCeeEEEeehhhhhcCCH---------------------------------------HHHHH
Confidence 2 333 4555555889999999999999997431 23456
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++.......... + .......+.+++...+++.| |+
T Consensus 128 ~~~~~LkpgG~l~i~~~~~~~~~~----------------------~----------~~~~~~~~~~~~~~~l~~~G-f~ 174 (219)
T 3dh0_A 128 ELKRVAKPFAYLAIIDWKKEERDK----------------------G----------PPPEEVYSEWEVGLILEDAG-IR 174 (219)
T ss_dssp HHHHHEEEEEEEEEEEECSSCCSS----------------------S----------CCGGGSCCHHHHHHHHHHTT-CE
T ss_pred HHHHHhCCCeEEEEEEeccccccc----------------------C----------CchhcccCHHHHHHHHHHCC-CE
Confidence 668899999999998766543210 0 11223468999999999999 98
Q ss_pred EeeEEEE
Q 017747 288 LDQLDMF 294 (366)
Q Consensus 288 i~~~e~~ 294 (366)
+.+...+
T Consensus 175 ~~~~~~~ 181 (219)
T 3dh0_A 175 VGRVVEV 181 (219)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 8766544
No 37
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.88 E-value=7.9e-08 Score=91.35 Aligned_cols=162 Identities=15% Similarity=0.189 Sum_probs=94.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+.+ ..+|+..|+........-+.+ ...+. ..++
T Consensus 90 ~~~~vLDiGcG~G~~~~~l--------a~~~---------~~~v~gvD~s~~~~~~a~~~~--------~~~~~--~~~v 142 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRA--------VERF---------DVNVIGLTLSKNQHARCEQVL--------ASIDT--NRSR 142 (318)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHHH---------CCEEEEEESCHHHHHHHHHHH--------HTSCC--SSCE
T ss_pred CcCEEEEEcccchHHHHHH--------HHHC---------CCEEEEEECCHHHHHHHHHHH--------HhcCC--CCce
Confidence 4579999999999988653 2221 158889998654322221111 11111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. +++ ..+ | +++|++++..++|++.. .|...+|+.
T Consensus 143 ~~~~---~d~-~~~-~-~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 179 (318)
T 2fk8_A 143 QVLL---QGW-EDF-A-EPVDRIVSIEAFEHFGH-------------------------------------ENYDDFFKR 179 (318)
T ss_dssp EEEE---SCG-GGC-C-CCCSEEEEESCGGGTCG-------------------------------------GGHHHHHHH
T ss_pred EEEE---CCh-HHC-C-CCcCEEEEeChHHhcCH-------------------------------------HHHHHHHHH
Confidence 333 344 232 4 89999999999999742 133455677
Q ss_pred HHHHhccCceEEEEeecCCCCCCC-CCCchhHHHHHHHHHHHHHHcCccchhhhcccCcc-ccCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHV-DRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAH-FYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~-~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P-~y~ps~eEv~~~i~~~gsf 286 (366)
-.+-|+|||++++..+...+.... .......++ ...+.+...+ ...| .+.|+.+++.+.+++.| |
T Consensus 180 ~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f 246 (318)
T 2fk8_A 180 CFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFE--TARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-F 246 (318)
T ss_dssp HHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHH--HHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-C
T ss_pred HHHhcCCCcEEEEEEeccCCchhhhhcccccccc--ccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-C
Confidence 789999999999998877542100 000000000 1111121111 1123 46689999999999999 9
Q ss_pred EEeeEEEE
Q 017747 287 KLDQLDMF 294 (366)
Q Consensus 287 ~i~~~e~~ 294 (366)
++...+.+
T Consensus 247 ~~~~~~~~ 254 (318)
T 2fk8_A 247 TVPEPLSL 254 (318)
T ss_dssp BCCCCEEC
T ss_pred EEEEEEec
Confidence 88766554
No 38
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.88 E-value=6.9e-09 Score=92.08 Aligned_cols=159 Identities=12% Similarity=0.080 Sum_probs=93.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
++.+|+|+|||+|..+..+ .++ +..+++..|+.......+-+.+. ..+.. .+-.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l--------~~~---------~~~~v~~~D~s~~~~~~a~~~~~--------~~~~~-~~~~ 96 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIAL--------AKQ---------SDFSIRALDFSKHMNEIALKNIA--------DANLN-DRIQ 96 (219)
T ss_dssp CEEEEEEETCTTSHHHHHH--------HHH---------SEEEEEEEESCHHHHHHHHHHHH--------HTTCT-TTEE
T ss_pred CCCEEEEECCCCCHHHHHH--------HHc---------CCCeEEEEECCHHHHHHHHHHHH--------hcccc-CceE
Confidence 3459999999999988642 221 23789999986533222221111 11110 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+-.+|++++|+++++.++||+.+ ...+|+.-
T Consensus 97 ~~~---~d~~~~~~~~~~~D~v~~~~~l~~~~~---------------------------------------~~~~l~~~ 134 (219)
T 3dlc_A 97 IVQ---GDVHNIPIEDNYADLIVSRGSVFFWED---------------------------------------VATAFREI 134 (219)
T ss_dssp EEE---CBTTBCSSCTTCEEEEEEESCGGGCSC---------------------------------------HHHHHHHH
T ss_pred EEE---cCHHHCCCCcccccEEEECchHhhccC---------------------------------------HHHHHHHH
Confidence 333 466554588999999999999999733 12346667
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++...-... .+.+.+...+.... .+ ....+.......+.+++.+.+++.| |++.
T Consensus 135 ~~~L~pgG~l~~~~~~~~~---------~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~l~~aG-f~~v 198 (219)
T 3dlc_A 135 YRILKSGGKTYIGGGFGNK---------ELRDSISAEMIRKN-PD-----WKEFNRKNISQENVERFQNVLDEIG-ISSY 198 (219)
T ss_dssp HHHEEEEEEEEEEECCSSH---------HHHHHHHHHHHHHC-TT-----HHHHHHHHSSHHHHHHHHHHHHHHT-CSSE
T ss_pred HHhCCCCCEEEEEeccCcH---------HHHHHHHHHHHHhH-HH-----HHhhhhhccccCCHHHHHHHHHHcC-CCeE
Confidence 8999999999997532221 12233333333220 00 0001111223348899999999999 8775
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
++.
T Consensus 199 ~~~ 201 (219)
T 3dlc_A 199 EII 201 (219)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 39
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.87 E-value=4.9e-09 Score=99.78 Aligned_cols=171 Identities=16% Similarity=0.180 Sum_probs=98.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+ .+..+++..|+........-+...... .........+-.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l--------~~---------~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~~~~~~~~~~~ 93 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKW--------KK---------GRINKLVCTDIADVSVKQCQQRYEDMK---NRRDSEYIFSAE 93 (313)
T ss_dssp -CCEEEEETCTTTTTHHHH--------HH---------TTCSEEEEEESCHHHHHHHHHHHHHHH---SSSCC-CCCEEE
T ss_pred CCCEEEEECCCCcHHHHHH--------Hh---------cCCCEEEEEeCCHHHHHHHHHHHHHhh---hcccccccceEE
Confidence 4679999999999988642 22 123689999987654333322211100 000000001122
Q ss_pred EEeccCCCccccc----CC--CCcccEEEcccccccc-cCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL----FP--NNSLHFIHSSNSLHWL-SKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDF 202 (366)
Q Consensus 130 f~~~vpgSFy~~l----fp--~~s~~~~~S~~alhWl-s~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~ 202 (366)
|+.+ +...-. ++ ++++|+++|+.++||+ .. ..|.
T Consensus 94 ~~~~---D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~------------------------------------~~~~ 134 (313)
T 3bgv_A 94 FITA---DSSKELLIDKFRDPQMCFDICSCQFVCHYSFES------------------------------------YEQA 134 (313)
T ss_dssp EEEC---CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGS------------------------------------HHHH
T ss_pred EEEe---cccccchhhhcccCCCCEEEEEEecchhhccCC------------------------------------HHHH
Confidence 4443 443322 43 5699999999999997 32 1245
Q ss_pred HHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHH--cC-------ccchhhh------------
Q 017747 203 TLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVS--QG-------EIEKEKL------------ 261 (366)
Q Consensus 203 ~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~--eG-------~i~~e~~------------ 261 (366)
..+|+.-++-|+|||++++++++.+. +...|...-. -| ..+.+.+
T Consensus 135 ~~~l~~~~~~LkpgG~li~~~~~~~~--------------l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~ 200 (313)
T 3bgv_A 135 DMMLRNACERLSPGGYFIGTTPNSFE--------------LIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLE 200 (313)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEECHHH--------------HHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEecCChHH--------------HHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEEC
Confidence 56778889999999999999876531 1222221100 00 0000000
Q ss_pred cccCccccCCCHHHHHHHHhhcCceEEeeEEEE
Q 017747 262 VAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMF 294 (366)
Q Consensus 262 d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~ 294 (366)
.....|.|..+.+++.+++++.| |++...+.|
T Consensus 201 ~~~~~~~~~~~~~~~~~l~~~~G-~~~v~~~~f 232 (313)
T 3bgv_A 201 GVVDVPEFLVYFPLLNEMAKKYN-MKLVYKKTF 232 (313)
T ss_dssp ---CCEEECCCHHHHHHHGGGGT-EEEEEEEEH
T ss_pred CcccCcceEEcHHHHHHHHHHcC-cEEEEecCH
Confidence 23356778889999999999999 888766554
No 40
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.84 E-value=5e-09 Score=98.48 Aligned_cols=90 Identities=20% Similarity=0.178 Sum_probs=65.2
Q ss_pred CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEE
Q 017747 143 FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLI 222 (366)
Q Consensus 143 fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~ 222 (366)
+|++++|+++|+.++||+..- ..|+..+|+.-++-|+|||+|++.
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~-----------------------------------~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPD-----------------------------------LASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSS-----------------------------------HHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCCCCCEEEehhhhhhhcCC-----------------------------------HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 567889999999999996531 124566778889999999999997
Q ss_pred eecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEeec
Q 017747 223 LLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQVE 297 (366)
Q Consensus 223 ~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~ 297 (366)
..-..+. + . .| ....+.++.+++++.+.+++.| |++..++.+..+
T Consensus 215 ~~~~~~~--------~--~-----------~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 259 (289)
T 2g72_A 215 GALEESW--------Y--L-----------AG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 259 (289)
T ss_dssp EEESCCE--------E--E-----------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred EecCcce--------E--E-----------cC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEeecc
Confidence 4222110 0 0 01 1134567889999999999999 999888877643
No 41
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.84 E-value=9.9e-09 Score=91.52 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=93.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.. + .-
T Consensus 43 ~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~-----------~-----~~ 88 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAM--------LAA----------GFDVDATDGSPELAAEASRRL-----------G-----RP 88 (211)
T ss_dssp TTCEEEESSCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHH-----------T-----SC
T ss_pred CCCcEEEECCCCCHHHHHH--------HHc----------CCeEEEECCCHHHHHHHHHhc-----------C-----Cc
Confidence 4579999999999988642 221 267888898643222111110 0 11
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+. .+++. .+-+++++|+++++.++|++.. .|+..+|+.-
T Consensus 89 ~~---~~d~~-~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~~ 127 (211)
T 3e23_A 89 VR---TMLFH-QLDAIDAYDAVWAHACLLHVPR-------------------------------------DELADVLKLI 127 (211)
T ss_dssp CE---ECCGG-GCCCCSCEEEEEECSCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred eE---Eeeec-cCCCCCcEEEEEecCchhhcCH-------------------------------------HHHHHHHHHH
Confidence 12 23553 3348899999999999999641 2455677888
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++++....... .+.+...+.+.+.+++.+.+++.|.|++.
T Consensus 128 ~~~LkpgG~l~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~l~~aG~f~~~ 177 (211)
T 3e23_A 128 WRALKPGGLFYASYKSGEGEG------------------------------RDKLARYYNYPSEEWLRARYAEAGTWASV 177 (211)
T ss_dssp HHHEEEEEEEEEEEECCSSCE------------------------------ECTTSCEECCCCHHHHHHHHHHHCCCSEE
T ss_pred HHhcCCCcEEEEEEcCCCccc------------------------------ccccchhccCCCHHHHHHHHHhCCCcEEE
Confidence 899999999999975443210 01223345678999999999999868887
Q ss_pred eEEEEe
Q 017747 290 QLDMFQ 295 (366)
Q Consensus 290 ~~e~~~ 295 (366)
.++...
T Consensus 178 ~~~~~~ 183 (211)
T 3e23_A 178 AVESSE 183 (211)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 776543
No 42
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.83 E-value=2.7e-08 Score=92.87 Aligned_cols=166 Identities=19% Similarity=0.211 Sum_probs=98.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.+. +..+++..|+.......+-+.+. . .+. ..+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~--------l~~~---------~~~~v~gvD~s~~~~~~a~~~~~-------~-~~~--~~~ 115 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLK--------YERA---------GIGEYYGVDIAEVSINDARVRAR-------N-MKR--RFK 115 (298)
T ss_dssp CTTCEEEEETCTTTTTHHH--------HHHH---------TCSEEEEEESCHHHHHHHHHHHH-------T-SCC--SSE
T ss_pred CCCCeEEEECCCCCHHHHH--------HHHC---------CCCEEEEEECCHHHHHHHHHHHH-------h-cCC--Ccc
Confidence 4568999999999998864 2221 12588999986543332222111 0 111 012
Q ss_pred -eEEeccCCCcccccC-CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 -VYIAGYPGSFYGRLF-PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 -~f~~~vpgSFy~~lf-p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
.|+. +++.+-.+ +++++|+++++.++||+-. . ..|...+|
T Consensus 116 v~~~~---~d~~~~~~~~~~~fD~v~~~~~l~~~~~------~-----------------------------~~~~~~~l 157 (298)
T 1ri5_A 116 VFFRA---QDSYGRHMDLGKEFDVISSQFSFHYAFS------T-----------------------------SESLDIAQ 157 (298)
T ss_dssp EEEEE---SCTTTSCCCCSSCEEEEEEESCGGGGGS------S-----------------------------HHHHHHHH
T ss_pred EEEEE---CCccccccCCCCCcCEEEECchhhhhcC------C-----------------------------HHHHHHHH
Confidence 2333 45554445 6889999999999999521 0 13556778
Q ss_pred HHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHH-HHcCc----------cch---hhh-----cc-cCc
Q 017747 207 RSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAIL-VSQGE----------IEK---EKL-----VA-YHA 266 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~m-v~eG~----------i~~---e~~-----d~-f~~ 266 (366)
+.-.+-|+|||++++..+.... +.+.+ ... ....+ +.. .+. +. -..
T Consensus 158 ~~~~~~LkpgG~l~~~~~~~~~----------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 223 (298)
T 1ri5_A 158 RNIARHLRPGGYFIMTVPSRDV----------ILERY----KQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNC 223 (298)
T ss_dssp HHHHHTEEEEEEEEEEEECHHH----------HHHHH----HHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSE
T ss_pred HHHHHhcCCCCEEEEEECCHHH----------HHHHH----ccCccCCeeEEEEeCccccccccccceEEEEEchhhcCC
Confidence 8889999999999999865421 11111 110 00000 000 000 00 023
Q ss_pred cccCCCHHHHHHHHhhcCceEEeeEEEE
Q 017747 267 HFYAPSKEEIEGEVGREGSFKLDQLDMF 294 (366)
Q Consensus 267 P~y~ps~eEv~~~i~~~gsf~i~~~e~~ 294 (366)
|.++.+++|+..++++.| |++...+.+
T Consensus 224 ~~~~~~~~~l~~ll~~aG-f~~v~~~~~ 250 (298)
T 1ri5_A 224 IEYFVDFTRMVDGFKRLG-LSLVERKGF 250 (298)
T ss_dssp EEECCCHHHHHHHHHTTT-EEEEEEEEH
T ss_pred cccccCHHHHHHHHHHcC-CEEEEecCH
Confidence 457889999999999999 988766554
No 43
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.82 E-value=1.6e-08 Score=95.42 Aligned_cols=208 Identities=14% Similarity=0.116 Sum_probs=114.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+.+ .+..+|+..|+........-+.+. ...+.. .+-.
T Consensus 36 ~~~~vLDiGcG~G~~~~~l--------a~~~-------~~~~~v~gvD~s~~~~~~a~~~~~-------~~~~~~-~~v~ 92 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQM--------AQEL-------KPFEQIIGSDLSATMIKTAEVIKE-------GSPDTY-KNVS 92 (299)
T ss_dssp CCSEEEEETCTTTHHHHHH--------HHHS-------SCCSEEEEEESCHHHHHHHHHHHH-------HCC-CC-TTEE
T ss_pred CCCEEEEECCCCCHHHHHH--------HHhC-------CCCCEEEEEeCCHHHHHHHHHHHH-------hccCCC-CceE
Confidence 5689999999999998753 2221 134889999986543332222111 100110 1223
Q ss_pred EEeccCCCcccccCCC------CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPN------NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFT 203 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~------~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~ 203 (366)
|+. +++.+-.++. +++|+++++.++||+ + | .
T Consensus 93 ~~~---~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-~--------------------------------------~ 129 (299)
T 3g5t_A 93 FKI---SSSDDFKFLGADSVDKQKIDMITAVECAHWF-D-F--------------------------------------E 129 (299)
T ss_dssp EEE---CCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-C-H--------------------------------------H
T ss_pred EEE---cCHHhCCccccccccCCCeeEEeHhhHHHHh-C-H--------------------------------------H
Confidence 444 3554434565 899999999999998 3 2 1
Q ss_pred HHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccC-CCHHHHHHHHhh
Q 017747 204 LFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYA-PSKEEIEGEVGR 282 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~-ps~eEv~~~i~~ 282 (366)
.+|+.-.+-|+|||+|++...+....... . .+...+.++... +....|++. |..+.+++.+++
T Consensus 130 ~~l~~~~~~LkpgG~l~i~~~~~~~~~~~----~----~~~~~~~~~~~~--------~~~~~~~w~~p~~~~~~~~l~~ 193 (299)
T 3g5t_A 130 KFQRSAYANLRKDGTIAIWGYADPIFPDY----P----EFDDLMIEVPYG--------KQGLGPYWEQPGRSRLRNMLKD 193 (299)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEEEECTTC----G----GGTTHHHHHHHC--------TTTTGGGSCTTHHHHHHTTTTT
T ss_pred HHHHHHHHhcCCCcEEEEEecCCccccCc----H----HHHHHHHHhccC--------cccccchhhchhhHHHHHhhhc
Confidence 34566688999999999976654321100 0 122233332211 113345444 888899999999
Q ss_pred cCce-----EEeeEEEEee-ccCCC--------C----cccchhhhHhhhHHHhhhhH-HHh--hcCCCcchHHHHHHH
Q 017747 283 EGSF-----KLDQLDMFQV-ERQGH--------D----RGESYGSAVARTVRAIQEST-IIH--HFGIGEGVLDNLFEI 340 (366)
Q Consensus 283 ~gsf-----~i~~~e~~~~-~~~~~--------~----d~~~~~~~~~~~~Ra~~e~~-l~~--~~g~~~~i~d~lf~r 340 (366)
.| | +-.+.+.+.. .|... . .....-+.+..++|+|+.-. ... .-+...++++++.++
T Consensus 194 ~g-fp~~~f~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~s~~~~~~~~~~~~~~~~~~~~~~~~ 271 (299)
T 3g5t_A 194 SH-LDPELFHDIQVSYFCAEDVRDKVKLHQHTKKPLLIRKQVTLVEFADYVRTWSAYHQWKQDPKNKDKEDVADWFIKE 271 (299)
T ss_dssp CC-CCTTTEEEEEEEEECGGGGGCHHHHHHCSSCCCCCEEEECHHHHHHHHTTSHHHHHHHHCGGGTTSCCHHHHHHHH
T ss_pred cC-CChHHcCcceEEEecccccccccccccCCCCceeeeccccHHHHHHHHHHhHHHHHHHhcccCCchhhHHHHHHHH
Confidence 88 5 3322233322 11111 0 00223457888888876521 112 223112666666655
No 44
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.81 E-value=8.9e-09 Score=98.03 Aligned_cols=153 Identities=12% Similarity=0.017 Sum_probs=95.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +++ ..+|+..|+........-+.+ ...+.. ..-.
T Consensus 117 ~~~~vLDiGcG~G~~~~~la--------~~~---------~~~v~gvD~s~~~~~~a~~~~--------~~~~~~-~~v~ 170 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAH--------RRF---------GSRVEGVTLSAAQADFGNRRA--------RELRID-DHVR 170 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHH--------HHH---------CCEEEEEESCHHHHHHHHHHH--------HHTTCT-TTEE
T ss_pred CCCEEEEecCCCCHHHHHHH--------HHc---------CCEEEEEeCCHHHHHHHHHHH--------HHcCCC-CceE
Confidence 45799999999999987532 221 167888898643222111111 111111 1123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++.+-.+|++++|+++++.++||+. +. .+|+.-
T Consensus 171 ~~~---~d~~~~~~~~~~fD~V~~~~~l~~~~--~~--------------------------------------~~l~~~ 207 (312)
T 3vc1_A 171 SRV---CNMLDTPFDKGAVTASWNNESTMYVD--LH--------------------------------------DLFSEH 207 (312)
T ss_dssp EEE---CCTTSCCCCTTCEEEEEEESCGGGSC--HH--------------------------------------HHHHHH
T ss_pred EEE---CChhcCCCCCCCEeEEEECCchhhCC--HH--------------------------------------HHHHHH
Confidence 444 46655457889999999999999973 21 235666
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++......+... .....++.+ ... ..| .+++.+++.+++++.| |++.
T Consensus 208 ~~~LkpgG~l~~~~~~~~~~~~---~~~~~~~~~----~~~--------------~~~-~~~s~~~~~~~l~~aG-f~~~ 264 (312)
T 3vc1_A 208 SRFLKVGGRYVTITGCWNPRYG---QPSKWVSQI----NAH--------------FEC-NIHSRREYLRAMADNR-LVPH 264 (312)
T ss_dssp HHHEEEEEEEEEEEEEECTTTC---SCCHHHHHH----HHH--------------HTC-CCCBHHHHHHHHHTTT-EEEE
T ss_pred HHHcCCCcEEEEEEcccccccc---chhHHHHHH----Hhh--------------hcC-CCCCHHHHHHHHHHCC-CEEE
Confidence 8899999999999876655321 111111111 110 111 4789999999999999 9887
Q ss_pred eEEEE
Q 017747 290 QLDMF 294 (366)
Q Consensus 290 ~~e~~ 294 (366)
..+.+
T Consensus 265 ~~~~~ 269 (312)
T 3vc1_A 265 TIVDL 269 (312)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66654
No 45
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.81 E-value=1.5e-08 Score=94.30 Aligned_cols=86 Identities=19% Similarity=0.173 Sum_probs=62.9
Q ss_pred CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEee
Q 017747 145 NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 145 ~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.+++|+++|+++|||+..-+ .|+...|+.-++-|||||+|+++..
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~-----------------------------------~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSL-----------------------------------DAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSH-----------------------------------HHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCCCEeeehHHHHHhcCCH-----------------------------------HHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 57999999999999964321 2455667888999999999999965
Q ss_pred cCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEEe
Q 017747 225 GRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMFQ 295 (366)
Q Consensus 225 g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~ 295 (366)
...+. +. .| .-..+.+..+.+|+.+.+++.| |++.+++...
T Consensus 199 ~~~~~--------~~-------------~g--------~~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 199 LRLPS--------YM-------------VG--------KREFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp SSCCE--------EE-------------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred ecCcc--------ce-------------eC--------CeEeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 43221 10 11 0123455679999999999999 9998887764
No 46
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.79 E-value=1.2e-08 Score=92.22 Aligned_cols=109 Identities=14% Similarity=0.177 Sum_probs=71.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+. ..+++..|+..+.....-+.+. . .+ ..-
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l--------~~~----------~~~~~~~D~s~~~~~~a~~~~~-------~-~~---~~~ 86 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENL--------CPK----------FKNTWAVDLSQEMLSEAENKFR-------S-QG---LKP 86 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHH--------GGG----------SSEEEEECSCHHHHHHHHHHHH-------H-TT---CCC
T ss_pred CCCCeEEEeCCCCCHHHHHH--------HHC----------CCcEEEEECCHHHHHHHHHHHh-------h-cC---CCe
Confidence 35689999999999998742 111 1578899986543333222111 1 00 111
Q ss_pred eEEeccCCCcccccCCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-|.. +++.+-.++ +++|+++++. ++||+.. ..|...+|+
T Consensus 87 ~~~~---~d~~~~~~~-~~fD~v~~~~~~l~~~~~------------------------------------~~~~~~~l~ 126 (246)
T 1y8c_A 87 RLAC---QDISNLNIN-RKFDLITCCLDSTNYIID------------------------------------SDDLKKYFK 126 (246)
T ss_dssp EEEC---CCGGGCCCS-CCEEEEEECTTGGGGCCS------------------------------------HHHHHHHHH
T ss_pred EEEe---cccccCCcc-CCceEEEEcCccccccCC------------------------------------HHHHHHHHH
Confidence 2333 455443455 8999999998 9999632 124566788
Q ss_pred HHHHHhccCceEEEEeecC
Q 017747 208 SRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~ 226 (366)
.-.+-|+|||++++.+...
T Consensus 127 ~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 127 AVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp HHHTTEEEEEEEEEEEECH
T ss_pred HHHHhcCCCcEEEEEecCH
Confidence 8899999999999987654
No 47
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.79 E-value=2.9e-08 Score=91.00 Aligned_cols=164 Identities=11% Similarity=0.126 Sum_probs=95.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+. .+ -+++..|+........-+... . ..-.
T Consensus 44 ~~~~vLD~GcG~G~~~~~--------l~~~--------~~-~~v~~vD~s~~~~~~a~~~~~-----------~--~~~~ 93 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIY--------AAEH--------GA-KKVLGIDLSERMLTEAKRKTT-----------S--PVVC 93 (253)
T ss_dssp TTCEEEEETCTTCHHHHH--------HHHT--------TC-SEEEEEESCHHHHHHHHHHCC-----------C--TTEE
T ss_pred CCCEEEEECCCCCHHHHH--------HHHc--------CC-CEEEEEECCHHHHHHHHHhhc-----------c--CCeE
Confidence 468999999999998764 2221 12 288999986532222211111 0 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++..-.+|++++|+++++.++||+.+ ...+|+.-
T Consensus 94 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~---------------------------------------~~~~l~~~ 131 (253)
T 3g5l_A 94 YEQ---KAIEDIAIEPDAYNVVLSSLALHYIAS---------------------------------------FDDICKKV 131 (253)
T ss_dssp EEE---CCGGGCCCCTTCEEEEEEESCGGGCSC---------------------------------------HHHHHHHH
T ss_pred EEE---cchhhCCCCCCCeEEEEEchhhhhhhh---------------------------------------HHHHHHHH
Confidence 343 466554578899999999999999733 12346677
Q ss_pred HHHhccCceEEEEeecCCCCCCC---------CCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHH
Q 017747 210 SEELVVGGRMVLILLGRIGPDHV---------DRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEV 280 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~---------~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i 280 (366)
.+-|+|||+++++.......... ....... |.....++.... ....-....|.+|.+|+.+.+
T Consensus 132 ~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~t~~~~~~~l 203 (253)
T 3g5l_A 132 YINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWP-------VDRYFNESMRTS-HFLGEDVQKYHRTVTTYIQTL 203 (253)
T ss_dssp HHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEE-------ECCTTCCCEEEE-EETTEEEEEECCCHHHHHHHH
T ss_pred HHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEE-------eccccccceEEE-eeccccCccEecCHHHHHHHH
Confidence 89999999999987543211000 0000000 000000111000 001113556778999999999
Q ss_pred hhcCceEEeeEEEE
Q 017747 281 GREGSFKLDQLDMF 294 (366)
Q Consensus 281 ~~~gsf~i~~~e~~ 294 (366)
+++| |++..++..
T Consensus 204 ~~aG-F~~~~~~e~ 216 (253)
T 3g5l_A 204 LKNG-FQINSVIEP 216 (253)
T ss_dssp HHTT-EEEEEEECC
T ss_pred HHcC-CeeeeeecC
Confidence 9999 998766543
No 48
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.79 E-value=3.5e-09 Score=100.06 Aligned_cols=177 Identities=16% Similarity=0.153 Sum_probs=99.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
.+.+|+|+|||+|..+..+ .+. ..+|+..|+.......+-+.+......+. .+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~--------~~v 135 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPF--------LDL----------GWEVTALELSTSVLAAFRKRLAEAPADVR--------DRC 135 (299)
T ss_dssp CCSCEEEETCTTTTTHHHH--------HTT----------TCCEEEEESCHHHHHHHHHHHHTSCHHHH--------TTE
T ss_pred CCCcEEEEeccCCHHHHHH--------HHc----------CCeEEEEECCHHHHHHHHHHHhhcccccc--------cce
Confidence 3459999999999998752 121 26789999865433332222111000000 12
Q ss_pred eEEeccCCCcccccCCCCcccEEE-cccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIH-SSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~-S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-|+. +++.+ +-+++++|+++ ++.++||++. .|...+|+
T Consensus 136 ~~~~---~d~~~-~~~~~~fD~v~~~~~~~~~~~~-------------------------------------~~~~~~l~ 174 (299)
T 3g2m_A 136 TLVQ---GDMSA-FALDKRFGTVVISSGSINELDE-------------------------------------ADRRGLYA 174 (299)
T ss_dssp EEEE---CBTTB-CCCSCCEEEEEECHHHHTTSCH-------------------------------------HHHHHHHH
T ss_pred EEEe---Cchhc-CCcCCCcCEEEECCcccccCCH-------------------------------------HHHHHHHH
Confidence 2344 45544 33378999877 5688998532 24556778
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHH-HHHHHHHHHHcCccc---------------hhhhcccCccccCC
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWEL-LSRSLAILVSQGEIE---------------KEKLVAYHAHFYAP 271 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~-l~~al~~mv~eG~i~---------------~e~~d~f~~P~y~p 271 (366)
.-.+-|+|||+|++..................+.. -...+ ........ ...+..+....++.
T Consensus 175 ~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (299)
T 3g2m_A 175 SVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRY--VLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLL 252 (299)
T ss_dssp HHHHHEEEEEEEEEEEECCHHHHSCCCCC---------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEE
T ss_pred HHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEE--EEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEe
Confidence 88999999999999998775431110000000000 00000 00000000 00112234556678
Q ss_pred CHHHHHHHHhhcCceEEeeEEEEee
Q 017747 272 SKEEIEGEVGREGSFKLDQLDMFQV 296 (366)
Q Consensus 272 s~eEv~~~i~~~gsf~i~~~e~~~~ 296 (366)
+++|+.+.+++.| |++...+.+..
T Consensus 253 t~~el~~ll~~aG-F~v~~~~~~~~ 276 (299)
T 3g2m_A 253 APDQVVRELVRSG-FDVIAQTPFAS 276 (299)
T ss_dssp CHHHHHHHHHHTT-CEEEEEEEECT
T ss_pred CHHHHHHHHHHCC-CEEEEEEecCC
Confidence 9999999999999 99988877653
No 49
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.79 E-value=4.5e-08 Score=92.63 Aligned_cols=165 Identities=16% Similarity=0.156 Sum_probs=97.7
Q ss_pred CceEEEeecCCC--CcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 50 KTINIADLGCSS--GPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 50 ~~~~IaDlGCs~--G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
..-+|+|+|||+ |.|+..+...+ .|..+|+..|....+....-+.+.. .+. ..
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~---------------~P~arVv~VD~sp~mLa~Ar~~l~~--------~~~--~~ 132 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSV---------------APESRVVYVDNDPIVLTLSQGLLAS--------TPE--GR 132 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHH---------------CTTCEEEEEECCHHHHHTTHHHHCC--------CSS--SE
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHH---------------CCCCEEEEEeCChHHHHHHHHHhcc--------CCC--Cc
Confidence 356899999997 77876432222 3568999999865433322222211 000 11
Q ss_pred ceEEeccCCCcccc--cC--C--CCccc-----EEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGR--LF--P--NNSLH-----FIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFK 196 (366)
Q Consensus 128 ~~f~~~vpgSFy~~--lf--p--~~s~~-----~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~ 196 (366)
.-|+.+ ++.+- ++ | .+++| .++++.+||||.+-.
T Consensus 133 ~~~v~a---D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~-------------------------------- 177 (277)
T 3giw_A 133 TAYVEA---DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED-------------------------------- 177 (277)
T ss_dssp EEEEEC---CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG--------------------------------
T ss_pred EEEEEe---cccChhhhhcccccccccCcCCcchHHhhhhHhcCCchh--------------------------------
Confidence 236665 44321 11 1 34555 488999999986521
Q ss_pred HHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHH
Q 017747 197 QFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEI 276 (366)
Q Consensus 197 Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv 276 (366)
|....|+.-.+-|+|||+|+++.++.+.. + ...+.+.+.++. - -.|+.++|.+|+
T Consensus 178 ----~p~~~l~~l~~~L~PGG~Lvls~~~~d~~-p------~~~~~~~~~~~~---~-----------g~p~~~rs~~ei 232 (277)
T 3giw_A 178 ----DAVGIVRRLLEPLPSGSYLAMSIGTAEFA-P------QEVGRVAREYAA---R-----------NMPMRLRTHAEA 232 (277)
T ss_dssp ----CHHHHHHHHHTTSCTTCEEEEEEECCTTS-H------HHHHHHHHHHHH---T-----------TCCCCCCCHHHH
T ss_pred ----hHHHHHHHHHHhCCCCcEEEEEeccCCCC-H------HHHHHHHHHHHh---c-----------CCCCccCCHHHH
Confidence 11123455578899999999999887531 1 112223333332 2 348899999999
Q ss_pred HHHHhhcCceEEeeEEEEe-eccCCCC
Q 017747 277 EGEVGREGSFKLDQLDMFQ-VERQGHD 302 (366)
Q Consensus 277 ~~~i~~~gsf~i~~~e~~~-~~~~~~~ 302 (366)
.+.+. | |++..--... ..|.|..
T Consensus 233 ~~~f~--G-lelvePG~v~~~~Wrp~~ 256 (277)
T 3giw_A 233 EEFFE--G-LELVEPGIVQVHKWHPDA 256 (277)
T ss_dssp HHTTT--T-SEECTTCSEEGGGSSCCT
T ss_pred HHHhC--C-CcccCCcEeecccccCCC
Confidence 99995 7 8875544433 4487753
No 50
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.77 E-value=1.5e-07 Score=90.30 Aligned_cols=151 Identities=18% Similarity=0.091 Sum_probs=92.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ .|..+++.-|+|. .....-+.+ ...+. .+++
T Consensus 169 ~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-~~~~a~~~~--------~~~~~--~~~v 221 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSA--------LLTA--------HEDLSGTVLDLQG-PASAAHRRF--------LDTGL--SGRA 221 (332)
T ss_dssp GGSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-HHHHHHHHH--------HHTTC--TTTE
T ss_pred CCCEEEEeCCChhHHHHH--------HHHH--------CCCCeEEEecCHH-HHHHHHHhh--------hhcCc--CcCe
Confidence 468999999999988764 3332 2447788889842 222211111 11111 1223
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.++|+ .-+|. ++|++++.+++|..++ .+...+|+.-
T Consensus 222 --~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~-------------------------------------~~~~~~l~~~ 260 (332)
T 3i53_A 222 --QVVVGSFF-DPLPA-GAGGYVLSAVLHDWDD-------------------------------------LSAVAILRRC 260 (332)
T ss_dssp --EEEECCTT-SCCCC-SCSEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred --EEecCCCC-CCCCC-CCcEEEEehhhccCCH-------------------------------------HHHHHHHHHH
Confidence 22346887 44566 8999999999997433 1344567888
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
++-|+|||++++.-.-.++..+ ...++... |+.. .-..+|.+|++++++++| |++.
T Consensus 261 ~~~L~pgG~l~i~e~~~~~~~~-----~~~~d~~~-----~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~ 316 (332)
T 3i53_A 261 AEAAGSGGVVLVIEAVAGDEHA-----GTGMDLRM-----LTYF-------------GGKERSLAELGELAAQAG-LAVR 316 (332)
T ss_dssp HHHHTTTCEEEEEECCCC---C-----CHHHHHHH-----HHHH-------------SCCCCCHHHHHHHHHHTT-EEEE
T ss_pred HHhcCCCCEEEEEeecCCCCCc-----cHHHHHHH-----HhhC-------------CCCCCCHHHHHHHHHHCC-CEEE
Confidence 9999999999998654433211 12223211 1111 123579999999999999 9886
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
+..
T Consensus 317 ~~~ 319 (332)
T 3i53_A 317 AAH 319 (332)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 51
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.77 E-value=1.5e-08 Score=93.48 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=69.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+ . ..+++..|+.......+-+.++ +-
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l--------~~--------~--~~~v~gvD~s~~~~~~a~~~~~---------------~~ 95 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHL--------AD--------S--FGTVEGLELSADMLAIARRRNP---------------DA 95 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHH--------TT--------T--SSEEEEEESCHHHHHHHHHHCT---------------TS
T ss_pred CCCCcEEEeCCcCCHHHHHH--------HH--------c--CCeEEEEECCHHHHHHHHhhCC---------------CC
Confidence 45689999999999988642 11 1 1578888986432222222111 12
Q ss_pred eEEeccCCCcccccCCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-|+. +++.+ +-+++++|+++++. ++||+.. ..|+..+|+
T Consensus 96 ~~~~---~d~~~-~~~~~~fD~v~~~~~~l~~~~~------------------------------------~~~~~~~l~ 135 (263)
T 3pfg_A 96 VLHH---GDMRD-FSLGRRFSAVTCMFSSIGHLAG------------------------------------QAELDAALE 135 (263)
T ss_dssp EEEE---CCTTT-CCCSCCEEEEEECTTGGGGSCH------------------------------------HHHHHHHHH
T ss_pred EEEE---CChHH-CCccCCcCEEEEcCchhhhcCC------------------------------------HHHHHHHHH
Confidence 2333 35543 32378999999998 9999643 135667788
Q ss_pred HHHHHhccCceEEEEeecC
Q 017747 208 SRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~ 226 (366)
.-.+-|+|||++++.....
T Consensus 136 ~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 136 RFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp HHHHTEEEEEEEEECCCCC
T ss_pred HHHHhcCCCcEEEEEeccC
Confidence 8899999999999975433
No 52
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.77 E-value=2.2e-07 Score=90.89 Aligned_cols=153 Identities=16% Similarity=0.135 Sum_probs=93.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+.. +.++ .|..+++..|+|. ....... .++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-----~~~~a~~-------------~~~ 247 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASM--------IVAK--------YPSINAINFDLPH-----VIQDAPA-------------FSG 247 (368)
T ss_dssp TTCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-----HHTTCCC-------------CTT
T ss_pred cCCCEEEEeCCCcCHHHHH--------HHHh--------CCCCEEEEEehHH-----HHHhhhh-------------cCC
Confidence 3468999999999998874 3332 3458899999852 1111110 122
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.|+|++ -+|++ |++++++.+|+++. .+...+|+.
T Consensus 248 v--~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~-------------------------------------~~~~~~l~~ 285 (368)
T 3reo_A 248 V--EHLGGDMFD-GVPKG--DAIFIKWICHDWSD-------------------------------------EHCLKLLKN 285 (368)
T ss_dssp E--EEEECCTTT-CCCCC--SEEEEESCGGGBCH-------------------------------------HHHHHHHHH
T ss_pred C--EEEecCCCC-CCCCC--CEEEEechhhcCCH-------------------------------------HHHHHHHHH
Confidence 2 234578886 67765 99999999986432 234467788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.-.-.++... . . .........-+.-|+. ...-..++.+|++++++++| |++
T Consensus 286 ~~~~L~pgG~l~i~e~~~~~~~~-~-~-~~~~~~~~~d~~~~~~------------~~~g~~rt~~e~~~ll~~AG-F~~ 349 (368)
T 3reo_A 286 CYAALPDHGKVIVAEYILPPSPD-P-S-IATKVVIHTDALMLAY------------NPGGKERTEKEFQALAMASG-FRG 349 (368)
T ss_dssp HHHHSCTTCEEEEEECCCCSSCC-C-C-HHHHHHHHHHHHHHHH------------SSBCCCCCHHHHHHHHHHTT-CCE
T ss_pred HHHHcCCCCEEEEEEeccCCCCC-C-c-hhhhHHHhhhHHHHhh------------cCCCccCCHHHHHHHHHHCC-Cee
Confidence 89999999999987554433211 0 0 0000001111111110 01123578999999999999 888
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.++..
T Consensus 350 v~~~~ 354 (368)
T 3reo_A 350 FKVAS 354 (368)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 66554
No 53
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.76 E-value=8.9e-08 Score=90.75 Aligned_cols=167 Identities=11% Similarity=0.089 Sum_probs=99.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..++.+ .. ...|..+|+..|+.......+-+.+. ..+. ..+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~l--------a~-------~~~~~~~v~gvD~s~~~~~~a~~~~~--------~~~~--~~~ 171 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLAL--------DY-------SACPGVQLVGIDYDPEALDGATRLAA--------GHAL--AGQ 171 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTS--------CC-------TTCTTCEEEEEESCHHHHHHHHHHHT--------TSTT--GGG
T ss_pred CCCCEEEEecCCCCHHHHHH--------HH-------hcCCCCeEEEEECCHHHHHHHHHHHH--------hcCC--CCc
Confidence 45689999999999988631 00 12455899999986543222222111 0011 111
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |+. +++.+-.++ +++|+++++.++|++... .....||+
T Consensus 172 v~~~~---~d~~~~~~~-~~fD~v~~~~~~~~~~~~------------------------------------~~~~~~l~ 211 (305)
T 3ocj_A 172 ITLHR---QDAWKLDTR-EGYDLLTSNGLNIYEPDD------------------------------------ARVTELYR 211 (305)
T ss_dssp EEEEE---CCGGGCCCC-SCEEEEECCSSGGGCCCH------------------------------------HHHHHHHH
T ss_pred eEEEE---CchhcCCcc-CCeEEEEECChhhhcCCH------------------------------------HHHHHHHH
Confidence 2 333 577665566 999999999999986441 12334677
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCC------chhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHh
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRG------NSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~------~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~ 281 (366)
.-.+-|+|||++++....+......... ...........+.+... ..-..+++.+|+.+.++
T Consensus 212 ~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~ 279 (305)
T 3ocj_A 212 RFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQ------------PRWNALRTHAQTRAQLE 279 (305)
T ss_dssp HHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTC------------CSCCCCCCHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHh------------hhhhccCCHHHHHHHHH
Confidence 7789999999999998877553211110 00001111222221100 11124579999999999
Q ss_pred hcCceEEeeEEE
Q 017747 282 REGSFKLDQLDM 293 (366)
Q Consensus 282 ~~gsf~i~~~e~ 293 (366)
+.| |++.+.+.
T Consensus 280 ~aG-F~~v~~~~ 290 (305)
T 3ocj_A 280 EAG-FTDLRFED 290 (305)
T ss_dssp HTT-CEEEEEEC
T ss_pred HCC-CEEEEEEc
Confidence 999 99876664
No 54
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.76 E-value=1.9e-08 Score=91.74 Aligned_cols=147 Identities=14% Similarity=0.065 Sum_probs=94.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+ .. ..+++..|+.......+-+.+... +. ..--
T Consensus 79 ~~~~vLDiGcG~G~~~~~l--------~~--------~~-~~~v~~vD~s~~~~~~a~~~~~~~--------~~--~~~~ 131 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRL--------LL--------PL-FREVDMVDITEDFLVQAKTYLGEE--------GK--RVRN 131 (241)
T ss_dssp CCSEEEEETCTTTHHHHHT--------TT--------TT-CSEEEEEESCHHHHHHHHHHTGGG--------GG--GEEE
T ss_pred CCCEEEEECCCCCHHHHHH--------HH--------hc-CCEEEEEeCCHHHHHHHHHHhhhc--------CC--ceEE
Confidence 4689999999999988642 11 11 257889998654433333332210 00 0112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++..-.++++++|++++..++|++.+ .++..+|+.-
T Consensus 132 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l~~~ 171 (241)
T 2ex4_A 132 YFC---CGLQDFTPEPDSYDVIWIQWVIGHLTD-------------------------------------QHLAEFLRRC 171 (241)
T ss_dssp EEE---CCGGGCCCCSSCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred EEE---cChhhcCCCCCCEEEEEEcchhhhCCH-------------------------------------HHHHHHHHHH
Confidence 333 455555577789999999999998643 1234567777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++........ .+++ . ....+.++.+++.+.+++.| |++.
T Consensus 172 ~~~LkpgG~l~i~~~~~~~~--------~~~~---------------------~-~~~~~~~~~~~~~~~l~~aG-f~~~ 220 (241)
T 2ex4_A 172 KGSLRPNGIIVIKDNMAQEG--------VILD---------------------D-VDSSVCRDLDVVRRIICSAG-LSLL 220 (241)
T ss_dssp HHHEEEEEEEEEEEEEBSSS--------EEEE---------------------T-TTTEEEEBHHHHHHHHHHTT-CCEE
T ss_pred HHhcCCCeEEEEEEccCCCc--------ceec---------------------c-cCCcccCCHHHHHHHHHHcC-CeEE
Confidence 89999999999987655430 0000 0 11234559999999999999 9887
Q ss_pred eEEEE
Q 017747 290 QLDMF 294 (366)
Q Consensus 290 ~~e~~ 294 (366)
+.+..
T Consensus 221 ~~~~~ 225 (241)
T 2ex4_A 221 AEERQ 225 (241)
T ss_dssp EEEEC
T ss_pred Eeeec
Confidence 66643
No 55
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.75 E-value=1.1e-07 Score=91.95 Aligned_cols=153 Identities=20% Similarity=0.154 Sum_probs=93.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.++ .|..+++.-|+|.. .. -+... ..+. .++
T Consensus 183 ~~~~~vLDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~~-~~--~~~~~--------~~~~--~~~ 233 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLT--------VLRE--------HPGLQGVLLDRAEV-VA--RHRLD--------APDV--AGR 233 (348)
T ss_dssp CSSEEEEEETCTTSHHHHH--------HHHH--------CTTEEEEEEECHHH-HT--TCCCC--------CGGG--TTS
T ss_pred cCCceEEEECCccCHHHHH--------HHHH--------CCCCEEEEecCHHH-hh--ccccc--------ccCC--CCC
Confidence 4568999999999998864 3332 24588899998631 00 00000 0000 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.++|+ ..+| ++|++++++++|..++ .+...+|+.
T Consensus 234 v--~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d-------------------------------------~~~~~~L~~ 271 (348)
T 3lst_A 234 W--KVVEGDFL-REVP--HADVHVLKRILHNWGD-------------------------------------EDSVRILTN 271 (348)
T ss_dssp E--EEEECCTT-TCCC--CCSEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred e--EEEecCCC-CCCC--CCcEEEEehhccCCCH-------------------------------------HHHHHHHHH
Confidence 2 22346887 4456 9999999999997433 133456788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.-...++... ......++ +.-|+. ..-..++.+|+++++++.| |++
T Consensus 272 ~~~~LkpgG~l~i~e~~~~~~~~--~~~~~~~d-----~~~~~~-------------~~~~~~t~~e~~~ll~~aG-f~~ 330 (348)
T 3lst_A 272 CRRVMPAHGRVLVIDAVVPEGND--AHQSKEMD-----FMMLAA-------------RTGQERTAAELEPLFTAAG-LRL 330 (348)
T ss_dssp HHHTCCTTCEEEEEECCBCSSSS--CCHHHHHH-----HHHHHT-------------TSCCCCBHHHHHHHHHHTT-EEE
T ss_pred HHHhcCCCCEEEEEEeccCCCCC--cchhhhcC-----hhhhhc-------------CCCcCCCHHHHHHHHHHCC-Cce
Confidence 89999999999997654443211 00011111 111111 1123578999999999999 988
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.++..
T Consensus 331 ~~~~~ 335 (348)
T 3lst_A 331 DRVVG 335 (348)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 56
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.74 E-value=1.3e-07 Score=88.07 Aligned_cols=152 Identities=11% Similarity=0.033 Sum_probs=92.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhH--HHHhhhcC-----
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFH--RQLRNERG----- 122 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~--~~~~~~~~----- 122 (366)
...+|+|+|||+|.++.. |.++ | .+|+..|+....-...++...... ..+....+
T Consensus 68 ~~~~vLD~GCG~G~~~~~--------La~~-----G-----~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~ 129 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKW--------FADR-----G-----HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFK 129 (252)
T ss_dssp CSCEEEETTCTTCTHHHH--------HHHT-----T-----CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEE
T ss_pred CCCeEEEeCCCCcHHHHH--------HHHC-----C-----CeEEEEECCHHHHHHHHHhcccccccccccccccccccc
Confidence 457999999999999874 3221 1 689999998755444333221000 00000000
Q ss_pred CCCCCc-eEEeccCCCcccccCCC-CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHH
Q 017747 123 GGSSPS-VYIAGYPGSFYGRLFPN-NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQE 200 (366)
Q Consensus 123 ~~~~~~-~f~~~vpgSFy~~lfp~-~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 200 (366)
.. ..+ -|.. +++.+-.+++ +++|++++..++|++. ..
T Consensus 130 ~~-~~~i~~~~---~D~~~l~~~~~~~FD~V~~~~~l~~l~---~~---------------------------------- 168 (252)
T 2gb4_A 130 SS-SGSISLYC---CSIFDLPRANIGKFDRIWDRGALVAIN---PG---------------------------------- 168 (252)
T ss_dssp ET-TSSEEEEE---SCTTTGGGGCCCCEEEEEESSSTTTSC---GG----------------------------------
T ss_pred cC-CCceEEEE---CccccCCcccCCCEEEEEEhhhhhhCC---HH----------------------------------
Confidence 00 112 2444 4776544543 8999999999999973 21
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHH
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEV 280 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i 280 (366)
+...+++.-++-|+|||+|++..+..+.. ...-|.+..+++|+.+.+
T Consensus 169 ~~~~~l~~~~~~LkpGG~l~l~~~~~~~~---------------------------------~~~g~~~~~~~~el~~~l 215 (252)
T 2gb4_A 169 DHDRYADIILSLLRKEFQYLVAVLSYDPT---------------------------------KHAGPPFYVPSAELKRLF 215 (252)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEECCTT---------------------------------SCCCSSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEEecCCc---------------------------------cCCCCCCCCCHHHHHHHh
Confidence 12345667789999999997665432210 011244557899999999
Q ss_pred hhcCceEEeeEEEEe
Q 017747 281 GREGSFKLDQLDMFQ 295 (366)
Q Consensus 281 ~~~gsf~i~~~e~~~ 295 (366)
+. + |++..++...
T Consensus 216 ~~-~-f~v~~~~~~~ 228 (252)
T 2gb4_A 216 GT-K-CSMQCLEEVD 228 (252)
T ss_dssp TT-T-EEEEEEEEEE
T ss_pred hC-C-eEEEEEeccc
Confidence 86 5 9998888654
No 57
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.74 E-value=7.9e-08 Score=85.82 Aligned_cols=154 Identities=12% Similarity=0.099 Sum_probs=94.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+ . + .+++..|+........-+. .. -
T Consensus 32 ~~~~vLdiG~G~G~~~~~l--------~~--------~-~-~~~~~~D~~~~~~~~~~~~----------------~~-~ 76 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAI--------KE--------N-G-TRVSGIEAFPEAAEQAKEK----------------LD-H 76 (230)
T ss_dssp TCSEEEEETCTTSHHHHHH--------HT--------T-T-CEEEEEESSHHHHHHHHTT----------------SS-E
T ss_pred CCCcEEEeCCCCCHHHHHH--------Hh--------c-C-CeEEEEeCCHHHHHHHHHh----------------CC-c
Confidence 4689999999999988642 11 1 3 7888889764321111110 11 1
Q ss_pred EEeccCCCccc--ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYG--RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~--~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+.. +++.+ .-++++++|+++++.++|++.+. ..+|+
T Consensus 77 ~~~---~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~ 114 (230)
T 3cc8_A 77 VVL---GDIETMDMPYEEEQFDCVIFGDVLEHLFDP---------------------------------------WAVIE 114 (230)
T ss_dssp EEE---SCTTTCCCCSCTTCEEEEEEESCGGGSSCH---------------------------------------HHHHH
T ss_pred EEE---cchhhcCCCCCCCccCEEEECChhhhcCCH---------------------------------------HHHHH
Confidence 222 34433 34678999999999999997541 13456
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhc-ccCccccCCCHHHHHHHHhhcCce
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLV-AYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d-~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.-.+-|+|||+++++...... +..+.. +.... ....... .-.....+.+.+++.+.+++.| |
T Consensus 115 ~~~~~L~~gG~l~~~~~~~~~-----------~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f 177 (230)
T 3cc8_A 115 KVKPYIKQNGVILASIPNVSH-----------ISVLAP----LLAGN-WTYTEYGLLDKTHIRFFTFNEMLRMFLKAG-Y 177 (230)
T ss_dssp HTGGGEEEEEEEEEEEECTTS-----------HHHHHH----HHTTC-CCCBSSSTTBTTCCCCCCHHHHHHHHHHTT-E
T ss_pred HHHHHcCCCCEEEEEeCCcch-----------HHHHHH----HhcCC-ceeccCCCCCcceEEEecHHHHHHHHHHcC-C
Confidence 668899999999999865432 111111 11111 1111000 0112345679999999999999 9
Q ss_pred EEeeEEEEeec
Q 017747 287 KLDQLDMFQVE 297 (366)
Q Consensus 287 ~i~~~e~~~~~ 297 (366)
++.+.+.+...
T Consensus 178 ~~~~~~~~~~~ 188 (230)
T 3cc8_A 178 SISKVDRVYVD 188 (230)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEecccC
Confidence 99887776544
No 58
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.74 E-value=5.5e-08 Score=86.70 Aligned_cols=156 Identities=14% Similarity=0.040 Sum_probs=90.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
.+.+|+|+|||+|..+.. +.+. ..+++..|+........- .. + ...
T Consensus 52 ~~~~vLdiG~G~G~~~~~--------l~~~----------~~~v~~vD~s~~~~~~a~-----------~~-~----~~~ 97 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRA--------LADR----------GIEAVGVDGDRTLVDAAR-----------AA-G----AGE 97 (227)
T ss_dssp CCSEEEEETCTTCHHHHH--------HHTT----------TCEEEEEESCHHHHHHHH-----------HT-C----SSC
T ss_pred CCCEEEEeCCCCCHHHHH--------HHHC----------CCEEEEEcCCHHHHHHHH-----------Hh-c----ccc
Confidence 458999999999998864 2111 268899998643221111 11 0 112
Q ss_pred EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+..+...++-... .+.+++|+++++.++| ..+ | ..+|+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~-~--------------------------------------~~~l~~ 137 (227)
T 3e8s_A 98 VHLASYAQLAEAKVPVGKDYDLICANFALL-HQD-I--------------------------------------IELLSA 137 (227)
T ss_dssp EEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSC-C--------------------------------------HHHHHH
T ss_pred cchhhHHhhcccccccCCCccEEEECchhh-hhh-H--------------------------------------HHHHHH
Confidence 2332111111123 3455699999999999 222 1 134566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++........... . +...|......+. .-.-...+.++++.+|+.+.+++.| |++
T Consensus 138 ~~~~L~pgG~l~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~aG-f~~ 203 (227)
T 3e8s_A 138 MRTLLVPGGALVIQTLHPWSVADG--D-------YQDGWREESFAGF----AGDWQPMPWYFRTLASWLNALDMAG-LRL 203 (227)
T ss_dssp HHHTEEEEEEEEEEECCTTTTCTT--C-------CSCEEEEECCTTS----SSCCCCEEEEECCHHHHHHHHHHTT-EEE
T ss_pred HHHHhCCCeEEEEEecCccccCcc--c-------cccccchhhhhcc----ccCcccceEEEecHHHHHHHHHHcC-CeE
Confidence 789999999999998876543110 0 0000000000000 0011256778999999999999999 999
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.+++.
T Consensus 204 ~~~~~ 208 (227)
T 3e8s_A 204 VSLQE 208 (227)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 77665
No 59
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.73 E-value=2.3e-07 Score=90.69 Aligned_cols=152 Identities=18% Similarity=0.184 Sum_probs=93.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ .|..+++..|+|. ....... .+++
T Consensus 201 ~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-----~~~~a~~-------------~~~v 246 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAA--------IAAH--------YPTIKGVNFDLPH-----VISEAPQ-------------FPGV 246 (364)
T ss_dssp TCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-----HHTTCCC-------------CTTE
T ss_pred CCCEEEEeCCCCCHHHHH--------HHHH--------CCCCeEEEecCHH-----HHHhhhh-------------cCCe
Confidence 468999999999998864 3332 3457889999852 1111110 1222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.++|++ -+|.+ |++++++++|..+. +|...+|+.-
T Consensus 247 --~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d-------------------------------------~~~~~~L~~~ 284 (364)
T 3p9c_A 247 --THVGGDMFK-EVPSG--DTILMKWILHDWSD-------------------------------------QHCATLLKNC 284 (364)
T ss_dssp --EEEECCTTT-CCCCC--SEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred --EEEeCCcCC-CCCCC--CEEEehHHhccCCH-------------------------------------HHHHHHHHHH
Confidence 234579887 67765 99999999985422 2345678888
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHH-HHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWE-LLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~-~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
++-|+|||++++.=...++... . ...+. ....-+.-|+. ...-..+|.+|++++++++| |++
T Consensus 285 ~~~L~pgG~l~i~e~~~~~~~~---~-~~~~~~~~~~d~~m~~~------------~~~g~~rt~~e~~~ll~~AG-F~~ 347 (364)
T 3p9c_A 285 YDALPAHGKVVLVQCILPVNPE---A-NPSSQGVFHVDMIMLAH------------NPGGRERYEREFQALARGAG-FTG 347 (364)
T ss_dssp HHHSCTTCEEEEEECCBCSSCC---S-SHHHHHHHHHHHHHHHH------------CSSCCCCBHHHHHHHHHHTT-CCE
T ss_pred HHHcCCCCEEEEEEeccCCCCC---c-chhhhhHHHhHHHHHhc------------ccCCccCCHHHHHHHHHHCC-Cce
Confidence 9999999999987554433211 0 11111 01111111110 11123468999999999999 988
Q ss_pred eeEEEE
Q 017747 289 DQLDMF 294 (366)
Q Consensus 289 ~~~e~~ 294 (366)
.++...
T Consensus 348 v~~~~~ 353 (364)
T 3p9c_A 348 VKSTYI 353 (364)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 766543
No 60
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.73 E-value=3e-07 Score=82.60 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=65.3
Q ss_pred CcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 017747 137 SFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVG 216 (366)
Q Consensus 137 SFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~G 216 (366)
++..-.++++++|+++++.++||+.+. ..+|+.-.+-|+||
T Consensus 92 d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~~~~~L~pg 132 (219)
T 1vlm_A 92 TAENLPLKDESFDFALMVTTICFVDDP---------------------------------------ERALKEAYRILKKG 132 (219)
T ss_dssp BTTBCCSCTTCEEEEEEESCGGGSSCH---------------------------------------HHHHHHHHHHEEEE
T ss_pred ccccCCCCCCCeeEEEEcchHhhccCH---------------------------------------HHHHHHHHHHcCCC
Confidence 444434678899999999999997431 13455667889999
Q ss_pred ceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEEEE
Q 017747 217 GRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLDMF 294 (366)
Q Consensus 217 G~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e~~ 294 (366)
|++++..+...+ .+. ..+..+ ..+ ..+.....+.+.+++.+.+++.| |++......
T Consensus 133 G~l~i~~~~~~~----------~~~---~~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 133 GYLIVGIVDRES----------FLG---REYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp EEEEEEEECSSS----------HHH---HHHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred cEEEEEEeCCcc----------HHH---HHHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 999999875532 111 111111 111 22334556789999999999999 998776654
No 61
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.72 E-value=1.3e-06 Score=83.62 Aligned_cols=152 Identities=18% Similarity=0.213 Sum_probs=92.4
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEE
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYI 131 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~ 131 (366)
.+|+|+|||+|..+.. +.++ .|..+++..|+ .......-+.+... .+ ..++
T Consensus 169 ~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~-~~~~~~a~~~~~~~--~~--------~~~v-- 219 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKA--------ILQA--------EPSARGVMLDR-EGSLGVARDNLSSL--LA--------GERV-- 219 (334)
T ss_dssp CEEEEETCTTCHHHHH--------HHHH--------CTTCEEEEEEC-TTCTHHHHHHTHHH--HH--------TTSE--
T ss_pred CEEEEeCCCchHHHHH--------HHHH--------CCCCEEEEeCc-HHHHHHHHHHHhhc--CC--------CCcE--
Confidence 8999999999998764 3232 24478999999 54444433333210 00 1122
Q ss_pred eccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 132 AGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSE 211 (366)
Q Consensus 132 ~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~ 211 (366)
..+.++|.+ .+| +++|++++.+.+|-. +. .+...+|+.-.+
T Consensus 220 ~~~~~d~~~-~~~-~~~D~v~~~~vl~~~---~~----------------------------------~~~~~~l~~~~~ 260 (334)
T 2ip2_A 220 SLVGGDMLQ-EVP-SNGDIYLLSRIIGDL---DE----------------------------------AASLRLLGNCRE 260 (334)
T ss_dssp EEEESCTTT-CCC-SSCSEEEEESCGGGC---CH----------------------------------HHHHHHHHHHHH
T ss_pred EEecCCCCC-CCC-CCCCEEEEchhccCC---CH----------------------------------HHHHHHHHHHHH
Confidence 223468877 355 789999999999832 21 123456778889
Q ss_pred HhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeE
Q 017747 212 ELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQL 291 (366)
Q Consensus 212 EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~ 291 (366)
-|+|||++++.-...++... ......++ +.-|...+ -..++.+|+++++++.| |++.+.
T Consensus 261 ~L~pgG~l~i~e~~~~~~~~--~~~~~~~~-----~~~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~ 319 (334)
T 2ip2_A 261 AMAGDGRVVVIERTISASEP--SPMSVLWD-----VHLFMACA-------------GRHRTTEEVVDLLGRGG-FAVERI 319 (334)
T ss_dssp HSCTTCEEEEEECCBCSSSC--CHHHHHHH-----HHHHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEE
T ss_pred hcCCCCEEEEEEeccCCCCC--cchhHHhh-----hHhHhhCC-------------CcCCCHHHHHHHHHHCC-CceeEE
Confidence 99999999998665443211 00011122 11111111 13468999999999999 988665
Q ss_pred E
Q 017747 292 D 292 (366)
Q Consensus 292 e 292 (366)
.
T Consensus 320 ~ 320 (334)
T 2ip2_A 320 V 320 (334)
T ss_dssp E
T ss_pred E
Confidence 4
No 62
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.70 E-value=1.6e-07 Score=91.66 Aligned_cols=160 Identities=13% Similarity=0.189 Sum_probs=94.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ .|..+++..|+|. .....-+.+. ..+. .+++
T Consensus 179 ~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-~~~~a~~~~~--------~~~~--~~~v 231 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQ--------CVQY--------NKEVEVTIVDLPQ-QLEMMRKQTA--------GLSG--SERI 231 (363)
T ss_dssp CCSEEEEESCTTCHHHHH--------HHHH--------STTCEEEEEECHH-HHHHHHHHHT--------TCTT--GGGE
T ss_pred CCCEEEEeCCCcCHHHHH--------HHHh--------CCCCEEEEEeCHH-HHHHHHHHHH--------hcCc--ccce
Confidence 468999999999998874 3332 2458999999852 2111111111 0111 0122
Q ss_pred EEeccCCCcccc--cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGR--LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~~--lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
..+.++|++. .+| +++|++++++.+|.++. .+...+|+
T Consensus 232 --~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~-------------------------------------~~~~~~l~ 271 (363)
T 3dp7_A 232 --HGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSE-------------------------------------EEVISILT 271 (363)
T ss_dssp --EEEECCCCSSSCCCC-CCCSEEEEESCSTTSCH-------------------------------------HHHHHHHH
T ss_pred --EEEEccccccCCCCC-CCcCEEEEechhhhCCH-------------------------------------HHHHHHHH
Confidence 2344688764 356 89999999999985432 23456678
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++.-...++... ....+. +.....+|... ....-..++.+|++++++++| |+
T Consensus 272 ~~~~~L~pgG~l~i~e~~~~~~~~----~~~~~~-~~~~~~~~~~~----------~~~~~~~~t~~e~~~ll~~AG-f~ 335 (363)
T 3dp7_A 272 RVAQSIGKDSKVYIMETLWDRQRY----ETASYC-LTQISLYFTAM----------ANGNSKMFHSDDLIRCIENAG-LE 335 (363)
T ss_dssp HHHHHCCTTCEEEEEECCTTSCSS----HHHHHH-HHHHHHHHHHS----------SCSSCCSCCHHHHHHHHHTTT-EE
T ss_pred HHHHhcCCCcEEEEEeeccCCccc----cchhhH-HHHhhhhHHhh----------hCCCCcccCHHHHHHHHHHcC-Ce
Confidence 888999999999987544433211 011111 11111111000 112234569999999999999 88
Q ss_pred EeeEE
Q 017747 288 LDQLD 292 (366)
Q Consensus 288 i~~~e 292 (366)
+.++.
T Consensus 336 ~v~~~ 340 (363)
T 3dp7_A 336 VEEIQ 340 (363)
T ss_dssp ESCCC
T ss_pred EEEEE
Confidence 86554
No 63
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.70 E-value=2.4e-07 Score=82.26 Aligned_cols=134 Identities=16% Similarity=0.212 Sum_probs=84.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcc-eEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEF-HFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~-~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
...+|+|+|||+|..+..+ .. +++..|+........-+..+ .-
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---------------------~~~~v~~vD~s~~~~~~a~~~~~---------------~~ 79 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---------------------PYPQKVGVEPSEAMLAVGRRRAP---------------EA 79 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---------------------CCSEEEEECCCHHHHHHHHHHCT---------------TS
T ss_pred CCCeEEEECCCCCHhHHhC---------------------CCCeEEEEeCCHHHHHHHHHhCC---------------Cc
Confidence 5689999999999987531 14 78888986533222221110 11
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.++. +++.+-.+|++++|+++++.++||+.+. ..+|+.
T Consensus 80 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~ 117 (211)
T 2gs9_A 80 TWVR---AWGEALPFPGESFDVVLLFTTLEFVEDV---------------------------------------ERVLLE 117 (211)
T ss_dssp EEEC---CCTTSCCSCSSCEEEEEEESCTTTCSCH---------------------------------------HHHHHH
T ss_pred EEEE---cccccCCCCCCcEEEEEEcChhhhcCCH---------------------------------------HHHHHH
Confidence 2333 3454444788999999999999997531 134566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHh
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~ 281 (366)
-.+-|+|||+++++.+.+.+ .|... +..+...| ........+.|++|++++++
T Consensus 118 ~~~~L~pgG~l~i~~~~~~~----------~~~~~---~~~~~~~~-------~~~~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 118 ARRVLRPGGALVVGVLEALS----------PWAAL---YRRLGEKG-------VLPWAQARFLAREDLKALLG 170 (211)
T ss_dssp HHHHEEEEEEEEEEEECTTS----------HHHHH---HHHHHHTT-------CTTGGGCCCCCHHHHHHHHC
T ss_pred HHHHcCCCCEEEEEecCCcC----------cHHHH---HHHHhhcc-------CccccccccCCHHHHHHHhc
Confidence 68899999999999876643 22212 11111222 11122345789999999999
No 64
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.69 E-value=6.7e-07 Score=87.36 Aligned_cols=154 Identities=19% Similarity=0.233 Sum_probs=94.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.++ .|..+++.-|+|. .....-+.+ . ..+. ..+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-~~~~a~~~~-------~-~~~l--~~~ 253 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAA--------VLDA--------FPGLRGTLLERPP-VAEEARELL-------T-GRGL--ADR 253 (369)
T ss_dssp TTCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-HHHHHHHHH-------H-HTTC--TTT
T ss_pred ccCcEEEEeCCCccHHHHH--------HHHH--------CCCCeEEEEcCHH-HHHHHHHhh-------h-hcCc--CCc
Confidence 3568999999999998764 3332 2457889999842 222111111 1 1111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.++|+ ..+|. ++|++++.+.+|+.++ .+...+|+.
T Consensus 254 v--~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d-------------------------------------~~~~~~L~~ 292 (369)
T 3gwz_A 254 C--EILPGDFF-ETIPD-GADVYLIKHVLHDWDD-------------------------------------DDVVRILRR 292 (369)
T ss_dssp E--EEEECCTT-TCCCS-SCSEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred e--EEeccCCC-CCCCC-CceEEEhhhhhccCCH-------------------------------------HHHHHHHHH
Confidence 3 22346887 45666 8999999999998543 122356778
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-++-|+|||++++.-...++.... ....++ +.-|+..| -..++.+|+++++++.| |++
T Consensus 293 ~~~~L~pgG~l~i~e~~~~~~~~~---~~~~~d-----~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f~~ 350 (369)
T 3gwz_A 293 IATAMKPDSRLLVIDNLIDERPAA---STLFVD-----LLLLVLVG-------------GAERSESEFAALLEKSG-LRV 350 (369)
T ss_dssp HHTTCCTTCEEEEEEEBCCSSCCH---HHHHHH-----HHHHHHHS-------------CCCBCHHHHHHHHHTTT-EEE
T ss_pred HHHHcCCCCEEEEEEeccCCCCCC---chhHhh-----HHHHhhcC-------------CccCCHHHHHHHHHHCC-CeE
Confidence 899999999999986655443110 011111 11111111 13578999999999999 988
Q ss_pred eeEE
Q 017747 289 DQLD 292 (366)
Q Consensus 289 ~~~e 292 (366)
.++.
T Consensus 351 ~~~~ 354 (369)
T 3gwz_A 351 ERSL 354 (369)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6664
No 65
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.66 E-value=9.4e-08 Score=84.39 Aligned_cols=144 Identities=13% Similarity=0.081 Sum_probs=93.1
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEe
Q 017747 53 NIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIA 132 (366)
Q Consensus 53 ~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~ 132 (366)
+|+|+|||+|..+..+ .+ . ..+++..|+.......+-+.+. . .+ ..-.|..
T Consensus 32 ~vLdiGcG~G~~~~~l--------~~---------~-~~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~~~~~ 82 (202)
T 2kw5_A 32 KILCLAEGEGRNACFL--------AS---------L-GYEVTAVDQSSVGLAKAKQLAQ-------E-KG---VKITTVQ 82 (202)
T ss_dssp EEEECCCSCTHHHHHH--------HT---------T-TCEEEEECSSHHHHHHHHHHHH-------H-HT---CCEEEEC
T ss_pred CEEEECCCCCHhHHHH--------Hh---------C-CCeEEEEECCHHHHHHHHHHHH-------h-cC---CceEEEE
Confidence 9999999999988642 11 1 2688999986533222221111 1 01 1112332
Q ss_pred ccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 133 GYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEE 212 (366)
Q Consensus 133 ~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~E 212 (366)
+++.+-.+|++++|+++++. .|| + ..|...+|+.-.+-
T Consensus 83 ---~d~~~~~~~~~~fD~v~~~~-~~~----~----------------------------------~~~~~~~l~~~~~~ 120 (202)
T 2kw5_A 83 ---SNLADFDIVADAWEGIVSIF-CHL----P----------------------------------SSLRQQLYPKVYQG 120 (202)
T ss_dssp ---CBTTTBSCCTTTCSEEEEEC-CCC----C----------------------------------HHHHHHHHHHHHTT
T ss_pred ---cChhhcCCCcCCccEEEEEh-hcC----C----------------------------------HHHHHHHHHHHHHh
Confidence 45555457889999999853 343 1 12455667788899
Q ss_pred hccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEeeEE
Q 017747 213 LVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLDQLD 292 (366)
Q Consensus 213 L~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~~~e 292 (366)
|+|||++++......+.. + ..| ....+.++.+++|+++.++ | |++..++
T Consensus 121 L~pgG~l~~~~~~~~~~~-------~-------------~~~--------~~~~~~~~~~~~~l~~~l~--G-f~v~~~~ 169 (202)
T 2kw5_A 121 LKPGGVFILEGFAPEQLQ-------Y-------------NTG--------GPKDLDLLPKLETLQSELP--S-LNWLIAN 169 (202)
T ss_dssp CCSSEEEEEEEECTTTGG-------G-------------TSC--------CSSSGGGCCCHHHHHHHCS--S-SCEEEEE
T ss_pred cCCCcEEEEEEecccccc-------C-------------CCC--------CCCcceeecCHHHHHHHhc--C-ceEEEEE
Confidence 999999999998765420 0 011 1234578899999999999 7 9999988
Q ss_pred EEeecc
Q 017747 293 MFQVER 298 (366)
Q Consensus 293 ~~~~~~ 298 (366)
....+.
T Consensus 170 ~~~~~~ 175 (202)
T 2kw5_A 170 NLERNL 175 (202)
T ss_dssp EEEEEC
T ss_pred EEEeec
Confidence 876653
No 66
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.66 E-value=1.4e-07 Score=86.44 Aligned_cols=163 Identities=13% Similarity=0.120 Sum_probs=97.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhH---------HHHhhh
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFH---------RQLRNE 120 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~---------~~~~~~ 120 (366)
+..+|+|+|||+|..++.+. + ..+ .+|+..|+..+....+-+.+.... +.+...
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~--------~--------~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 118 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSA--------C--------ESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDL 118 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTG--------G--------GTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHh--------h--------ccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcc
Confidence 46899999999999986421 1 112 478899987654443332221100 000000
Q ss_pred cCCCC-C--------C-c-eEEeccCCCccccc-CCC---CcccEEEcccccccccCCCCcccccccCCCccccEEEcCC
Q 017747 121 RGGGS-S--------P-S-VYIAGYPGSFYGRL-FPN---NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISES 185 (366)
Q Consensus 121 ~~~~~-~--------~-~-~f~~~vpgSFy~~l-fp~---~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~ 185 (366)
.+... . . - -|.. +++.+.. +++ +++|+++++.++|++.. .+
T Consensus 119 ~~~~~~~~~~~~~l~~~v~~~~~---~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~---~~------------------ 174 (265)
T 2i62_A 119 EGNRMKGPEKEEKLRRAIKQVLK---CDVTQSQPLGGVSLPPADCLLSTLCLDAACP---DL------------------ 174 (265)
T ss_dssp TTTCSCHHHHHHHHHHHEEEEEE---CCTTSSSTTTTCCCCCEEEEEEESCHHHHCS---SH------------------
T ss_pred cccccchHHHHHHhhhhheeEEE---eeeccCCCCCccccCCccEEEEhhhhhhhcC---Ch------------------
Confidence 00000 0 0 0 2332 3554432 356 89999999999997532 11
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccC
Q 017747 186 SPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYH 265 (366)
Q Consensus 186 s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~ 265 (366)
.|...+|+.-.+-|+|||+|++......+. + ..| ...
T Consensus 175 --------------~~~~~~l~~~~~~LkpgG~li~~~~~~~~~--------~-------------~~~--------~~~ 211 (265)
T 2i62_A 175 --------------PAYRTALRNLGSLLKPGGFLVMVDALKSSY--------Y-------------MIG--------EQK 211 (265)
T ss_dssp --------------HHHHHHHHHHHTTEEEEEEEEEEEESSCCE--------E-------------EET--------TEE
T ss_pred --------------HHHHHHHHHHHhhCCCCcEEEEEecCCCce--------E-------------EcC--------Ccc
Confidence 245567778889999999999987432210 0 011 112
Q ss_pred ccccCCCHHHHHHHHhhcCceEEeeEEEEeec
Q 017747 266 AHFYAPSKEEIEGEVGREGSFKLDQLDMFQVE 297 (366)
Q Consensus 266 ~P~y~ps~eEv~~~i~~~gsf~i~~~e~~~~~ 297 (366)
.+.+..+.+++.+.+++.| |++..++.....
T Consensus 212 ~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~ 242 (265)
T 2i62_A 212 FSSLPLGWETVRDAVEEAG-YTIEQFEVISQN 242 (265)
T ss_dssp EECCCCCHHHHHHHHHHTT-CEEEEEEEECCC
T ss_pred ccccccCHHHHHHHHHHCC-CEEEEEEEeccc
Confidence 3445678999999999999 999888876544
No 67
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.64 E-value=2.7e-07 Score=90.64 Aligned_cols=118 Identities=15% Similarity=0.158 Sum_probs=73.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcC-CCCCCc
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERG-GGSSPS 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~-~~~~~~ 128 (366)
...+|+|+|||+|..+..+.... .|..+|+..|+.......+-+.+..... ...| .. .++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~---------------~~~~~v~gvD~s~~~l~~a~~~~~~~~~---~~~g~~~-~~~ 143 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV---------------GEHGKVIGVDMLDNQLEVARKYVEYHAE---KFFGSPS-RSN 143 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH---------------TTTCEEEEEECCHHHHHHHHHTHHHHHH---HHHSSTT-CCC
T ss_pred CCCEEEEecCccCHHHHHHHHHh---------------CCCCEEEEEECCHHHHHHHHHHHHHhhh---hcccccC-CCc
Confidence 35799999999999987532221 1347999999965433332222111000 0001 00 123
Q ss_pred e-EEeccCCCcccc------cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGR------LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQED 201 (366)
Q Consensus 129 ~-f~~~vpgSFy~~------lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 201 (366)
+ |+. +++.+- .+|++++|+++|+.++||+.+.
T Consensus 144 v~~~~---~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~-------------------------------------- 182 (383)
T 4fsd_A 144 VRFLK---GFIENLATAEPEGVPDSSVDIVISNCVCNLSTNK-------------------------------------- 182 (383)
T ss_dssp EEEEE---SCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCH--------------------------------------
T ss_pred eEEEE---ccHHHhhhcccCCCCCCCEEEEEEccchhcCCCH--------------------------------------
Confidence 3 444 355433 6789999999999999996441
Q ss_pred HHHHHHHHHHHhccCceEEEEeecCCC
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~~~ 228 (366)
..+|+.-.+-|+|||+|+++.+....
T Consensus 183 -~~~l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 183 -LALFKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp -HHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred -HHHHHHHHHHcCCCCEEEEEEecccc
Confidence 23456668899999999998776543
No 68
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.63 E-value=7.9e-08 Score=91.86 Aligned_cols=181 Identities=13% Similarity=0.143 Sum_probs=99.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCC---C
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGS---S 126 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~---~ 126 (366)
...+|+|+|||+|..+... + . ....+|+..|+....-...-+..+. .+... .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~-------~-~---------~~~~~v~GiD~S~~~l~~A~~~~~~--------~~~~~~~~~ 102 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKY-------F-Y---------GEIALLVATDPDADAIARGNERYNK--------LNSGIKTKY 102 (302)
T ss_dssp SCCEEEETTCTTTTTHHHH-------H-H---------TTCSEEEEEESCHHHHHHHHHHHHH--------HCC----CC
T ss_pred CCCeEEEEecCCcHhHHHH-------H-h---------cCCCeEEEEECCHHHHHHHHHHHHh--------ccccccccc
Confidence 4589999999999876421 1 1 0126899999987544433322111 00000 0
Q ss_pred -CceEEec-cCCCcc-cc---cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHH
Q 017747 127 -PSVYIAG-YPGSFY-GR---LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQE 200 (366)
Q Consensus 127 -~~~f~~~-vpgSFy-~~---lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 200 (366)
.--|..+ +-++-+ +. .+|++++|++.|..++||+-..+.
T Consensus 103 ~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~----------------------------------- 147 (302)
T 2vdw_A 103 YKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRH----------------------------------- 147 (302)
T ss_dssp CEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTT-----------------------------------
T ss_pred cccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHH-----------------------------------
Confidence 0113333 333333 22 368899999999999999754221
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchh-HHHH-H-HHHHHHHHHcCccchhh-------hcccCccccC
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSF-FWEL-L-SRSLAILVSQGEIEKEK-------LVAYHAHFYA 270 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~-~~~~-l-~~al~~mv~eG~i~~e~-------~d~f~~P~y~ 270 (366)
...+|+.-++-|+|||+|+++++.+............ ++.. . ...|. .-..++.+. -..-..|-|+
T Consensus 148 -~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e~~ 223 (302)
T 2vdw_A 148 -YATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYM---SVEKIADDRIVVYNPSTMSTPMTEYI 223 (302)
T ss_dssp -HHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEE---EECEEETTEEEEBCTTTBSSCEEEEC
T ss_pred -HHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCccccccccccccee---eeccccccccceeeccccCCCceeee
Confidence 1356788899999999999998765331100000000 0000 0 00000 000000000 0123456688
Q ss_pred CCHHHHHHHHhhcCceEEeeEEEEe
Q 017747 271 PSKEEIEGEVGREGSFKLDQLDMFQ 295 (366)
Q Consensus 271 ps~eEv~~~i~~~gsf~i~~~e~~~ 295 (366)
-+++|+.+.+++.| |++.....|.
T Consensus 224 v~~~el~~l~~~~G-l~lv~~~~f~ 247 (302)
T 2vdw_A 224 IKKNDIVRVFNEYG-FVLVDNVDFA 247 (302)
T ss_dssp CCHHHHHHHHHHTT-EEEEEEEEHH
T ss_pred eEHHHHHHHHHHCC-CEEEEecChH
Confidence 89999999999999 8886665543
No 69
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.63 E-value=2.3e-07 Score=83.08 Aligned_cols=113 Identities=12% Similarity=-0.002 Sum_probs=69.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+ ..|..+++..|+........-+.+.... +.... . ..--
T Consensus 29 ~~~~vLDiGcG~G~~~~~--------l~~--------~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~-~--~~v~ 87 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSL--------LLK--------DKSFEQITGVDVSYSVLERAKDRLKIDR--LPEMQ-R--KRIS 87 (219)
T ss_dssp TCCEEEEETCTTCHHHHH--------HHT--------STTCCEEEEEESCHHHHHHHHHHHTGGG--SCHHH-H--TTEE
T ss_pred CCCEEEEecCCCCHHHHH--------HHh--------cCCCCEEEEEECCHHHHHHHHHHHHhhc--ccccc-C--cceE
Confidence 457999999999998864 222 1234789999987644333332221100 00000 0 0122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++....++++++|+++++.++||++. .++..+|+.-
T Consensus 88 ~~~---~d~~~~~~~~~~fD~V~~~~~l~~~~~-------------------------------------~~~~~~l~~~ 127 (219)
T 3jwg_A 88 LFQ---SSLVYRDKRFSGYDAATVIEVIEHLDE-------------------------------------NRLQAFEKVL 127 (219)
T ss_dssp EEE---CCSSSCCGGGTTCSEEEEESCGGGCCH-------------------------------------HHHHHHHHHH
T ss_pred EEe---CcccccccccCCCCEEEEHHHHHhCCH-------------------------------------HHHHHHHHHH
Confidence 333 355444467789999999999999732 2345677888
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
.+-|+|||.++.+.
T Consensus 128 ~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 128 FEFTRPQTVIVSTP 141 (219)
T ss_dssp HTTTCCSEEEEEEE
T ss_pred HHhhCCCEEEEEcc
Confidence 99999999655543
No 70
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.63 E-value=1.9e-07 Score=81.00 Aligned_cols=128 Identities=18% Similarity=0.223 Sum_probs=84.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+. ..+++..|........+-+.++ +.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l--------~~~----------~~~v~~~D~~~~~~~~a~~~~~---------------~~ 91 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYL--------SKQ----------GHDVLGTDLDPILIDYAKQDFP---------------EA 91 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHCT---------------TS
T ss_pred cCCCeEEEECCCCCHHHHHH--------HHC----------CCcEEEEcCCHHHHHHHHHhCC---------------CC
Confidence 35679999999999988642 221 1578888875432222211111 11
Q ss_pred eEEeccCCCcccccCCCCcccEEEcc-cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSS-NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~-~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-++. +++.+-.+|++++|+++++ ..+|+++. .+...+|+
T Consensus 92 ~~~~---~d~~~~~~~~~~~D~i~~~~~~~~~~~~-------------------------------------~~~~~~l~ 131 (195)
T 3cgg_A 92 RWVV---GDLSVDQISETDFDLIVSAGNVMGFLAE-------------------------------------DGREPALA 131 (195)
T ss_dssp EEEE---CCTTTSCCCCCCEEEEEECCCCGGGSCH-------------------------------------HHHHHHHH
T ss_pred cEEE---cccccCCCCCCceeEEEECCcHHhhcCh-------------------------------------HHHHHHHH
Confidence 2333 3554444778899999998 67777421 23456677
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceE
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFK 287 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~ 287 (366)
.-.+-|+|||++++....... .+.+++...+++.| |+
T Consensus 132 ~~~~~l~~~G~l~~~~~~~~~------------------------------------------~~~~~~~~~l~~~G-f~ 168 (195)
T 3cgg_A 132 NIHRALGADGRAVIGFGAGRG------------------------------------------WVFGDFLEVAERVG-LE 168 (195)
T ss_dssp HHHHHEEEEEEEEEEEETTSS------------------------------------------CCHHHHHHHHHHHT-EE
T ss_pred HHHHHhCCCCEEEEEeCCCCC------------------------------------------cCHHHHHHHHHHcC-CE
Confidence 888999999999998643210 57888999999998 88
Q ss_pred EeeEE
Q 017747 288 LDQLD 292 (366)
Q Consensus 288 i~~~e 292 (366)
+....
T Consensus 169 ~~~~~ 173 (195)
T 3cgg_A 169 LENAF 173 (195)
T ss_dssp EEEEE
T ss_pred Eeeee
Confidence 75543
No 71
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.63 E-value=1.7e-07 Score=83.87 Aligned_cols=110 Identities=13% Similarity=-0.020 Sum_probs=68.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCC---C
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGS---S 126 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~---~ 126 (366)
...+|+|+|||+|..+.. +.+. .+..+++..|+........-+.+.. .+... .
T Consensus 29 ~~~~vLDiGcG~G~~~~~--------l~~~--------~~~~~v~gvD~s~~~~~~a~~~~~~--------~~~~~~~~~ 84 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKI--------LLKD--------SFFEQITGVDVSYRSLEIAQERLDR--------LRLPRNQWE 84 (217)
T ss_dssp TCCEEEEETCTTCHHHHH--------HHHC--------TTCSEEEEEESCHHHHHHHHHHHTT--------CCCCHHHHT
T ss_pred CCCEEEEeCCCCCHHHHH--------HHhh--------CCCCEEEEEECCHHHHHHHHHHHHH--------hcCCcccCc
Confidence 457999999999998874 2221 2337899999875443333222210 00000 0
Q ss_pred CceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 127 PSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 127 ~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
.--|.. +++....++.+++|+++++.++||+.. .++..+|
T Consensus 85 ~v~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~-------------------------------------~~~~~~l 124 (217)
T 3jwh_A 85 RLQLIQ---GALTYQDKRFHGYDAATVIEVIEHLDL-------------------------------------SRLGAFE 124 (217)
T ss_dssp TEEEEE---CCTTSCCGGGCSCSEEEEESCGGGCCH-------------------------------------HHHHHHH
T ss_pred ceEEEe---CCcccccccCCCcCEEeeHHHHHcCCH-------------------------------------HHHHHHH
Confidence 122333 344333456689999999999999732 2345677
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||+++++.
T Consensus 125 ~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 125 RVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp HHHHTTTCCSEEEEEEE
T ss_pred HHHHHHcCCCEEEEEcc
Confidence 78889999999766654
No 72
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.63 E-value=1.6e-07 Score=84.96 Aligned_cols=169 Identities=19% Similarity=0.223 Sum_probs=92.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+. .. .+++..|+.......+-+... . .+--
T Consensus 43 ~~~~vLdiG~G~G~~~~~--------l~~~--------~~-~~v~~vD~s~~~~~~a~~~~~-----------~--~~~~ 92 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRW--------AHEH--------GA-SYVLGLDLSEKMLARARAAGP-----------D--TGIT 92 (243)
T ss_dssp TTCEEEEETCTTCHHHHH--------HHHT--------TC-SEEEEEESCHHHHHHHHHTSC-----------S--SSEE
T ss_pred CCCEEEEEcCcCCHHHHH--------HHHC--------CC-CeEEEEcCCHHHHHHHHHhcc-----------c--CCce
Confidence 457999999999998764 2221 11 288888986432222211111 0 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+.. +++.+-.+|++++|+++++.++|++.+. ..+|+.-
T Consensus 93 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l~~~ 130 (243)
T 3bkw_A 93 YER---ADLDKLHLPQDSFDLAYSSLALHYVEDV---------------------------------------ARLFRTV 130 (243)
T ss_dssp EEE---CCGGGCCCCTTCEEEEEEESCGGGCSCH---------------------------------------HHHHHHH
T ss_pred EEE---cChhhccCCCCCceEEEEeccccccchH---------------------------------------HHHHHHH
Confidence 333 4665545788999999999999997431 2345666
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHH-HH--HHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLS-RS--LAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~-~a--l~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.+-|+|||+++++............. +..+... .. +.....++..... .-.-....|.++.+|+.+.++++| |
T Consensus 131 ~~~L~pgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~l~~aG-F 206 (243)
T 3bkw_A 131 HQALSPGGHFVFSTEHPIYMAPARPG--WAIDAEGRRTWPIDRYLVEGPRKTD-WLAKGVVKHHRTVGTTLNALIRSG-F 206 (243)
T ss_dssp HHHEEEEEEEEEEEECHHHHCCSSCS--CEECTTSCEEEEECCTTCCEEECTT-HHHHSCCEEECCHHHHHHHHHHTT-C
T ss_pred HHhcCcCcEEEEEeCCcccccCcCcc--eeecCCCceEEeecccccccceeee-eccCceEEEeccHHHHHHHHHHcC-C
Confidence 88999999999987543210000000 0000000 00 0000000000000 000034566789999999999999 9
Q ss_pred EEeeEEEE
Q 017747 287 KLDQLDMF 294 (366)
Q Consensus 287 ~i~~~e~~ 294 (366)
++..++..
T Consensus 207 ~~~~~~~~ 214 (243)
T 3bkw_A 207 AIEHVEEF 214 (243)
T ss_dssp EEEEEEEC
T ss_pred EeeeeccC
Confidence 98776643
No 73
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.62 E-value=5.8e-07 Score=86.64 Aligned_cols=155 Identities=14% Similarity=0.154 Sum_probs=94.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+.. +.++ .|..+++.-|+|. .....-+.+. ..+. ..++
T Consensus 180 ~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-~~~~a~~~~~--------~~~~--~~~v- 231 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQ--------VLRR--------HPQLTGQIWDLPT-TRDAARKTIH--------AHDL--GGRV- 231 (352)
T ss_dssp CCEEEEETCTTCHHHHH--------HHHH--------CTTCEEEEEECGG-GHHHHHHHHH--------HTTC--GGGE-
T ss_pred CCEEEEeCCCcCHHHHH--------HHHh--------CCCCeEEEEECHH-HHHHHHHHHH--------hcCC--CCce-
Confidence 68999999999998864 3332 2448888999953 2221111111 1111 1122
Q ss_pred EeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 131 ~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.++|++.. ++++++|+++++..+|++++ .+...+|+.-
T Consensus 232 -~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~-------------------------------------~~~~~~l~~~ 273 (352)
T 3mcz_A 232 -EFFEKNLLDARNFEGGAADVVMLNDCLHYFDA-------------------------------------REAREVIGHA 273 (352)
T ss_dssp -EEEECCTTCGGGGTTCCEEEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred -EEEeCCcccCcccCCCCccEEEEecccccCCH-------------------------------------HHHHHHHHHH
Confidence 22446776544 36677999999999998533 2345667888
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++.-...++... ...+..+..... |+.. .--..++.+|+++++++.| |++.
T Consensus 274 ~~~L~pgG~l~i~e~~~~~~~~-----~~~~~~~~~~~~-~~~~------------~~~~~~t~~e~~~ll~~aG-f~~~ 334 (352)
T 3mcz_A 274 AGLVKPGGALLILTMTMNDDRV-----TPALSADFSLHM-MVNT------------NHGELHPTPWIAGVVRDAG-LAVG 334 (352)
T ss_dssp HHTEEEEEEEEEEEECCCTTSS-----SSHHHHHHHHHH-HHHS------------TTCCCCCHHHHHHHHHHTT-CEEE
T ss_pred HHHcCCCCEEEEEEeccCCCCC-----CCchHHHhhHHH-HhhC------------CCCCcCCHHHHHHHHHHCC-Ccee
Confidence 9999999999998665544311 011111111111 1111 0112468999999999999 9886
Q ss_pred e
Q 017747 290 Q 290 (366)
Q Consensus 290 ~ 290 (366)
+
T Consensus 335 ~ 335 (352)
T 3mcz_A 335 E 335 (352)
T ss_dssp E
T ss_pred e
Confidence 6
No 74
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.61 E-value=9.8e-07 Score=85.82 Aligned_cols=154 Identities=14% Similarity=0.103 Sum_probs=92.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
..-+|+|+|||+|..++. +.++ .|.++++.-|+|.- -.. ...........++
T Consensus 179 ~~~~v~DvGgG~G~~~~~--------l~~~--------~p~~~~~~~dlp~v--~~~----------a~~~~~~~~~~rv 230 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKE--------CMSL--------YPGCKITVFDIPEV--VWT----------AKQHFSFQEEEQI 230 (353)
T ss_dssp GCSEEEEETCTTSHHHHH--------HHHH--------CSSCEEEEEECHHH--HHH----------HHHHSCC--CCSE
T ss_pred cCCeEEeeCCCCCHHHHH--------HHHh--------CCCceeEeccCHHH--HHH----------HHHhhhhcccCce
Confidence 346899999999998764 4343 45688999999841 111 1111000001233
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..++|+|++..+| ..|+++..+.||-.++ .+-..+|+..
T Consensus 231 --~~~~gD~~~~~~~--~~D~~~~~~vlh~~~d-------------------------------------~~~~~iL~~~ 269 (353)
T 4a6d_A 231 --DFQEGDFFKDPLP--EADLYILARVLHDWAD-------------------------------------GKCSHLLERI 269 (353)
T ss_dssp --EEEESCTTTSCCC--CCSEEEEESSGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred --eeecCccccCCCC--CceEEEeeeecccCCH-------------------------------------HHHHHHHHHH
Confidence 3456899987555 4699999999995322 2334568888
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
++-|+|||++++.=.-.++... ......+++ +.-|+.- .--.+|.+|++++++++| |++.
T Consensus 270 ~~al~pgg~lli~e~~~~~~~~-~~~~~~~~d-----l~ml~~~-------------~g~ert~~e~~~ll~~AG-f~~v 329 (353)
T 4a6d_A 270 YHTCKPGGGILVIESLLDEDRR-GPLLTQLYS-----LNMLVQT-------------EGQERTPTHYHMLLSSAG-FRDF 329 (353)
T ss_dssp HHHCCTTCEEEEEECCCCTTSC-CCHHHHHHH-----HHHHHSS-------------SCCCCCHHHHHHHHHHHT-CEEE
T ss_pred HhhCCCCCEEEEEEeeeCCCCC-CCHHHHHHH-----HHHHHhC-------------CCcCCCHHHHHHHHHHCC-CceE
Confidence 9999999999987543332211 000011122 1112111 113479999999999999 9876
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
++.
T Consensus 330 ~v~ 332 (353)
T 4a6d_A 330 QFK 332 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 75
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.58 E-value=1.4e-07 Score=84.23 Aligned_cols=107 Identities=13% Similarity=0.172 Sum_probs=71.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.+. . .++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~~-----------~--~~~ 98 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKL--------APH----------CKRLTVIDVMPRAIGRACQRTK-----------R--WSH 98 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHH--------GGG----------EEEEEEEESCHHHHHHHHHHTT-----------T--CSS
T ss_pred CCCCcEEEEcCCCCHHHHHH--------HHc----------CCEEEEEECCHHHHHHHHHhcc-----------c--CCC
Confidence 34689999999999988642 111 1578889986533332222221 1 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ |.. +++.+ +.|++++|+++++.++||+.+. .++..+|+
T Consensus 99 ~~~~~---~d~~~-~~~~~~fD~v~~~~~l~~~~~~------------------------------------~~~~~~l~ 138 (216)
T 3ofk_A 99 ISWAA---TDILQ-FSTAELFDLIVVAEVLYYLEDM------------------------------------TQMRTAID 138 (216)
T ss_dssp EEEEE---CCTTT-CCCSCCEEEEEEESCGGGSSSH------------------------------------HHHHHHHH
T ss_pred eEEEE---cchhh-CCCCCCccEEEEccHHHhCCCH------------------------------------HHHHHHHH
Confidence 2 333 35533 3388999999999999997641 23455677
Q ss_pred HHHHHhccCceEEEEeecC
Q 017747 208 SRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~ 226 (366)
.-.+-|+|||+++++....
T Consensus 139 ~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 139 NMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHTEEEEEEEEEEEECH
T ss_pred HHHHHcCCCCEEEEEecCC
Confidence 8889999999999987644
No 76
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.58 E-value=5.1e-08 Score=96.42 Aligned_cols=147 Identities=14% Similarity=0.147 Sum_probs=91.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ ..+++..|+..+.....-+. +.......
T Consensus 107 ~~~~VLDiGcG~G~~~~~--------l~~~----------g~~v~gvD~s~~~~~~a~~~------------~~~~~~~~ 156 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRT--------IQEA----------GVRHLGFEPSSGVAAKAREK------------GIRVRTDF 156 (416)
T ss_dssp SSCEEEEETCTTTTTHHH--------HHHT----------TCEEEEECCCHHHHHHHHTT------------TCCEECSC
T ss_pred CCCEEEEecCCCCHHHHH--------HHHc----------CCcEEEECCCHHHHHHHHHc------------CCCcceee
Confidence 457999999999998764 2221 15889999875433222111 11000000
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. ++...-.++++++|+++|+.++||+.+ ...||+.-
T Consensus 157 ~~~---~~~~~l~~~~~~fD~I~~~~vl~h~~d---------------------------------------~~~~l~~~ 194 (416)
T 4e2x_A 157 FEK---ATADDVRRTEGPANVIYAANTLCHIPY---------------------------------------VQSVLEGV 194 (416)
T ss_dssp CSH---HHHHHHHHHHCCEEEEEEESCGGGCTT---------------------------------------HHHHHHHH
T ss_pred ech---hhHhhcccCCCCEEEEEECChHHhcCC---------------------------------------HHHHHHHH
Confidence 111 111111257899999999999999743 23456777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhccc-CccccCCCHHHHHHHHhhcCceEE
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAY-HAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f-~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
.+-|+|||+|++......+ .+ . . ..++.+ .-...+++.+++..++++.| |++
T Consensus 195 ~r~LkpgG~l~i~~~~~~~-------------~~----~----~-----~~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~ 247 (416)
T 4e2x_A 195 DALLAPDGVFVFEDPYLGD-------------IV----A----K-----TSFDQIFDEHFFLFSATSVQGMAQRCG-FEL 247 (416)
T ss_dssp HHHEEEEEEEEEEEECHHH-------------HH----H----H-----TCGGGCSTTCCEECCHHHHHHHHHHTT-EEE
T ss_pred HHHcCCCeEEEEEeCChHH-------------hh----h----h-----cchhhhhhhhhhcCCHHHHHHHHHHcC-CEE
Confidence 8999999999998643311 11 0 1 111222 23445689999999999999 999
Q ss_pred eeEEEEe
Q 017747 289 DQLDMFQ 295 (366)
Q Consensus 289 ~~~e~~~ 295 (366)
.+++.+.
T Consensus 248 ~~~~~~~ 254 (416)
T 4e2x_A 248 VDVQRLP 254 (416)
T ss_dssp EEEEEEC
T ss_pred EEEEEcc
Confidence 8777653
No 77
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.58 E-value=3.1e-07 Score=87.61 Aligned_cols=158 Identities=17% Similarity=0.175 Sum_probs=94.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+.. +.+. .|..+++..|++ ......-+.+. . .+. ..+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~-~~~~~a~~~~~-------~-~~~--~~~ 216 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIA--------VAQH--------NPNAEIFGVDWA-SVLEVAKENAR-------I-QGV--ASR 216 (335)
T ss_dssp CCCSEEEEETCTTCHHHHH--------HHHH--------CTTCEEEEEECH-HHHHHHHHHHH-------H-HTC--GGG
T ss_pred CCCCEEEEECCCcCHHHHH--------HHHH--------CCCCeEEEEecH-HHHHHHHHHHH-------h-cCC--Ccc
Confidence 3468999999999988764 3232 244799999997 43332222111 0 111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.+++.+.-+|.+ +|++++++.+|..++ .+...+|+.
T Consensus 217 v--~~~~~d~~~~~~~~~-~D~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 256 (335)
T 2r3s_A 217 Y--HTIAGSAFEVDYGND-YDLVLLPNFLHHFDV-------------------------------------ATCEQLLRK 256 (335)
T ss_dssp E--EEEESCTTTSCCCSC-EEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred e--EEEecccccCCCCCC-CcEEEEcchhccCCH-------------------------------------HHHHHHHHH
Confidence 2 123357765445554 999999999987522 234566778
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.-...++.. .. ..+..+...+ -+... .....++.+|+++.+++.| |++
T Consensus 257 ~~~~L~pgG~l~i~e~~~~~~~-~~----~~~~~~~~~~-~~~~~------------~~~~~~t~~~~~~ll~~aG-f~~ 317 (335)
T 2r3s_A 257 IKTALAVEGKVIVFDFIPNSDR-IT----PPDAAAFSLV-MLATT------------PNGDAYTFAEYESMFSNAG-FSH 317 (335)
T ss_dssp HHHHEEEEEEEEEEECCCCTTS-SC----SHHHHHHHHH-HHHHS------------SSCCCCCHHHHHHHHHHTT-CSE
T ss_pred HHHhCCCCcEEEEEeecCCCCc-CC----chHHHHHHHH-HHeeC------------CCCCcCCHHHHHHHHHHCC-CCe
Confidence 8899999999998876554321 10 0111111111 11111 0124579999999999999 887
Q ss_pred eeEE
Q 017747 289 DQLD 292 (366)
Q Consensus 289 ~~~e 292 (366)
.+..
T Consensus 318 ~~~~ 321 (335)
T 2r3s_A 318 SQLH 321 (335)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 6553
No 78
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.55 E-value=5.1e-07 Score=87.57 Aligned_cols=159 Identities=13% Similarity=0.150 Sum_probs=95.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+.. +.++ .|..+++..|+ .......-+.+ .. .+. .++
T Consensus 189 ~~~~~vLDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~-~~~~~~a~~~~-------~~-~~~--~~~ 241 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAA--------MLKH--------FPELDSTILNL-PGAIDLVNENA-------AE-KGV--ADR 241 (359)
T ss_dssp TTCCEEEEESCTTCHHHHH--------HHHH--------CTTCEEEEEEC-GGGHHHHHHHH-------HH-TTC--TTT
T ss_pred CCCCEEEEECCcccHHHHH--------HHHH--------CCCCeEEEEec-HHHHHHHHHHH-------Hh-cCC--CCC
Confidence 3568999999999998875 3332 24578999999 43322222111 11 111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.+++.+..+|+. |+++++..+|.+++ .+...+|+.
T Consensus 242 v--~~~~~d~~~~~~~~~--D~v~~~~vlh~~~d-------------------------------------~~~~~~l~~ 280 (359)
T 1x19_A 242 M--RGIAVDIYKESYPEA--DAVLFCRILYSANE-------------------------------------QLSTIMCKK 280 (359)
T ss_dssp E--EEEECCTTTSCCCCC--SEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred E--EEEeCccccCCCCCC--CEEEEechhccCCH-------------------------------------HHHHHHHHH
Confidence 3 123468876656655 99999999985322 234567788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.-...++.. .. .+..+ + .|... ...-.....+++.+|+++++++.| |++
T Consensus 281 ~~~~L~pgG~l~i~e~~~~~~~---~~---~~~~~---~-~~~~~-------~~~g~~~~~~~t~~e~~~ll~~aG-f~~ 342 (359)
T 1x19_A 281 AFDAMRSGGRLLILDMVIDDPE---NP---NFDYL---S-HYILG-------AGMPFSVLGFKEQARYKEILESLG-YKD 342 (359)
T ss_dssp HHTTCCTTCEEEEEEECCCCTT---SC---CHHHH---H-HHGGG-------GGSSCCCCCCCCGGGHHHHHHHHT-CEE
T ss_pred HHHhcCCCCEEEEEecccCCCC---Cc---hHHHH---H-HHHHh-------cCCCCcccCCCCHHHHHHHHHHCC-Cce
Confidence 8999999999988766554321 00 11111 1 23211 000112334699999999999999 988
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.+...
T Consensus 343 v~~~~ 347 (359)
T 1x19_A 343 VTMVR 347 (359)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66554
No 79
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.54 E-value=1.3e-06 Score=85.21 Aligned_cols=149 Identities=17% Similarity=0.102 Sum_probs=91.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+.. +.++ .|..+++.-|+|. .-...+. .++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~--------l~~~--------~~~~~~~~~D~~~--~~~~a~~----------------~~~ 253 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLEL--------IISK--------YPLIKGINFDLPQ--VIENAPP----------------LSG 253 (372)
T ss_dssp TTCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH--HHTTCCC----------------CTT
T ss_pred CCCCEEEEeCCCCcHHHHH--------HHHH--------CCCCeEEEeChHH--HHHhhhh----------------cCC
Confidence 3468999999999999874 3332 2457888889842 1111110 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+..+.++|++ -+|. +|++++++++|++++ .+...+|+.
T Consensus 254 --v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d-------------------------------------~~~~~~l~~ 291 (372)
T 1fp1_D 254 --IEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD-------------------------------------EKCIEFLSN 291 (372)
T ss_dssp --EEEEECCTTT-CCCC--EEEEEEESSGGGSCH-------------------------------------HHHHHHHHH
T ss_pred --CEEEeCCccc-CCCC--CCEEEEecccccCCH-------------------------------------HHHHHHHHH
Confidence 2234468877 4565 899999999997543 123456788
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHH---HHcCccchhhhcccCccccCCCHHHHHHHHhhcCc
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAIL---VSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGS 285 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~m---v~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gs 285 (366)
-.+-|+|||++++.-...++... . . ..+. ...+.++ +..| -..++.+|+++++++.|
T Consensus 292 ~~~~L~pgG~l~i~e~~~~~~~~--~--~-~~~~-~~~~~d~~~~~~~~-------------~~~~t~~e~~~ll~~aG- 351 (372)
T 1fp1_D 292 CHKALSPNGKVIIVEFILPEEPN--T--S-EESK-LVSTLDNLMFITVG-------------GRERTEKQYEKLSKLSG- 351 (372)
T ss_dssp HHHHEEEEEEEEEEEEEECSSCC--S--S-HHHH-HHHHHHHHHHHHHS-------------CCCEEHHHHHHHHHHTT-
T ss_pred HHHhcCCCCEEEEEEeccCCCCc--c--c-hHHH-HHHHhhHHHHhccC-------------CccCCHHHHHHHHHHCC-
Confidence 89999999999998554433210 0 0 1110 0111111 1111 12359999999999999
Q ss_pred eEEeeEEE
Q 017747 286 FKLDQLDM 293 (366)
Q Consensus 286 f~i~~~e~ 293 (366)
|++.+...
T Consensus 352 f~~~~~~~ 359 (372)
T 1fp1_D 352 FSKFQVAC 359 (372)
T ss_dssp CSEEEEEE
T ss_pred CceEEEEE
Confidence 88765544
No 80
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.54 E-value=7.9e-08 Score=88.82 Aligned_cols=156 Identities=13% Similarity=0.182 Sum_probs=90.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+++..|+........- ... . ..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~l~~a~-----------~~~----~-~~ 99 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFL--------QER----------GFEVVLVDPSKEMLEVAR-----------EKG----V-KN 99 (260)
T ss_dssp SCCEEEEETCTTCHHHHHH--------HTT----------TCEEEEEESCHHHHHHHH-----------HHT----C-SC
T ss_pred CCCeEEEeCCCcCHHHHHH--------HHc----------CCeEEEEeCCHHHHHHHH-----------hhc----C-CC
Confidence 5689999999999988642 111 267888998643222111 110 1 12
Q ss_pred EEeccCCCcccccCCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. +++.+-.+|++++|+++++. .+||..+ | ..+|+.
T Consensus 100 ~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~~~-~--------------------------------------~~~l~~ 137 (260)
T 2avn_A 100 VVE---AKAEDLPFPSGAFEAVLALGDVLSYVEN-K--------------------------------------DKAFSE 137 (260)
T ss_dssp EEE---CCTTSCCSCTTCEEEEEECSSHHHHCSC-H--------------------------------------HHHHHH
T ss_pred EEE---CcHHHCCCCCCCEEEEEEcchhhhcccc-H--------------------------------------HHHHHH
Confidence 333 35544447889999999976 5677443 1 234566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHH----HHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcC
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLS----RSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREG 284 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~----~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~g 284 (366)
-.+-|+|||++++...+.... +.+.+. ..+......|...... ..+.++.++.+++|+.+. .|
T Consensus 138 ~~~~LkpgG~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG 204 (260)
T 2avn_A 138 IRRVLVPDGLLIATVDNFYTF---------LQQMIEKDAWDQITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG 204 (260)
T ss_dssp HHHHEEEEEEEEEEEEBHHHH---------HHHHHHTTCHHHHHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT
T ss_pred HHHHcCCCeEEEEEeCChHHH---------HHHhhcchhHHHHHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC
Confidence 688999999999998765321 111000 1112223344322110 011123347899999888 88
Q ss_pred ceEEeeEEEEe
Q 017747 285 SFKLDQLDMFQ 295 (366)
Q Consensus 285 sf~i~~~e~~~ 295 (366)
|++.+.....
T Consensus 205 -f~~~~~~~~~ 214 (260)
T 2avn_A 205 -FETVDIRGIG 214 (260)
T ss_dssp -EEEEEEEEEC
T ss_pred -ceEEEEECCC
Confidence 9887666543
No 81
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.54 E-value=4.8e-07 Score=87.86 Aligned_cols=158 Identities=20% Similarity=0.219 Sum_probs=91.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+.. +.+. .|..+++..|+ .......-+.+ .. .+. ..+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~--------l~~~--------~~~~~~~~~D~-~~~~~~a~~~~-------~~-~~~--~~~ 233 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAA--------IALR--------APHLRGTLVEL-AGPAERARRRF-------AD-AGL--ADR 233 (374)
T ss_dssp TTCCEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEEC-HHHHHHHHHHH-------HH-TTC--TTT
T ss_pred CCCCEEEEECCCcCHHHHH--------HHHH--------CCCCEEEEEeC-HHHHHHHHHHH-------Hh-cCC--CCc
Confidence 3468999999999988764 3332 24588999998 43222221111 11 111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ..+.+++.+ -+|.+ +|++++++.+|++++ .+...+|+.
T Consensus 234 v--~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~-------------------------------------~~~~~~l~~ 272 (374)
T 1qzz_A 234 V--TVAEGDFFK-PLPVT-ADVVLLSFVLLNWSD-------------------------------------EDALTILRG 272 (374)
T ss_dssp E--EEEECCTTS-CCSCC-EEEEEEESCGGGSCH-------------------------------------HHHHHHHHH
T ss_pred e--EEEeCCCCC-cCCCC-CCEEEEeccccCCCH-------------------------------------HHHHHHHHH
Confidence 2 123357765 34554 999999999987432 123456777
Q ss_pred HHHHhccCceEEEEee--cCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 209 RSEELVVGGRMVLILL--GRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~--g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
-.+-|+|||++++.-. ..++.. ...+..+...+. ++..| -..++.+|+++++++.| |
T Consensus 273 ~~~~L~pgG~l~i~e~~~~~~~~~------~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~ll~~aG-f 331 (374)
T 1qzz_A 273 CVRALEPGGRLLVLDRADVEGDGA------DRFFSTLLDLRM-LTFMG-------------GRVRTRDEVVDLAGSAG-L 331 (374)
T ss_dssp HHHHEEEEEEEEEEECCH-------------HHHHHHHHHHH-HHHHS-------------CCCCCHHHHHHHHHTTT-E
T ss_pred HHHhcCCCcEEEEEechhhcCCCC------CcchhhhcchHH-HHhCC-------------CcCCCHHHHHHHHHHCC-C
Confidence 7899999999998765 322210 011111111111 11111 24579999999999999 9
Q ss_pred EEeeEEEEe
Q 017747 287 KLDQLDMFQ 295 (366)
Q Consensus 287 ~i~~~e~~~ 295 (366)
++.++....
T Consensus 332 ~~~~~~~~~ 340 (374)
T 1qzz_A 332 ALASERTSG 340 (374)
T ss_dssp EEEEEEEEC
T ss_pred ceEEEEECC
Confidence 987766543
No 82
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.51 E-value=3.4e-07 Score=83.36 Aligned_cols=157 Identities=16% Similarity=-0.002 Sum_probs=88.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|.++..+ .+. + .+|+..|+.........+..+ . .+--
T Consensus 56 ~~~~vLD~GcG~G~~~~~l--------a~~-----~-----~~v~gvD~s~~~~~~a~~~~~-----------~--~~~~ 104 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFL--------SQF-----F-----PRVIGLDVSKSALEIAAKENT-----------A--ANIS 104 (245)
T ss_dssp TTSCEEEETCTTSHHHHHH--------HHH-----S-----SCEEEEESCHHHHHHHHHHSC-----------C--TTEE
T ss_pred CCCeEEEEcCCCCHHHHHH--------HHh-----C-----CCEEEEECCHHHHHHHHHhCc-----------c--cCce
Confidence 4578999999999998753 222 1 278888886543332222221 0 1122
Q ss_pred EEeccCCCcccccCC-----CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFP-----NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 130 f~~~vpgSFy~~lfp-----~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
|+.+ ++.+-.++ ..++|+++++.++||++. .|...
T Consensus 105 ~~~~---d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~-------------------------------------~~~~~ 144 (245)
T 3ggd_A 105 YRLL---DGLVPEQAAQIHSEIGDANIYMRTGFHHIPV-------------------------------------EKREL 144 (245)
T ss_dssp EEEC---CTTCHHHHHHHHHHHCSCEEEEESSSTTSCG-------------------------------------GGHHH
T ss_pred EEEC---cccccccccccccccCccEEEEcchhhcCCH-------------------------------------HHHHH
Confidence 4443 44332121 134899999999999742 12345
Q ss_pred HHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccch--hhhcccCccccCCCHHHHHHHHhh
Q 017747 205 FLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEK--EKLVAYHAHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~--e~~d~f~~P~y~ps~eEv~~~i~~ 282 (366)
+|+.-.+-|+|||++++.-++..+. ..+..+... ..|.-.. ..+.....|. ..+.+|+.+.+
T Consensus 145 ~l~~~~~~LkpgG~l~i~~~~~~~~--------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-- 208 (245)
T 3ggd_A 145 LGQSLRILLGKQGAMYLIELGTGCI--------DFFNSLLEK-----YGQLPYELLLVMEHGIRPG-IFTAEDIELYF-- 208 (245)
T ss_dssp HHHHHHHHHTTTCEEEEEEECTTHH--------HHHHHHHHH-----HSSCCHHHHHHHTTTCCCC-CCCHHHHHHHC--
T ss_pred HHHHHHHHcCCCCEEEEEeCCcccc--------HHHHHHHhC-----CCCCchhhhhccccCCCCC-ccCHHHHHHHh--
Confidence 6677789999999999887765431 111111111 0111000 0111122343 36899999999
Q ss_pred cCceEEeeEEEE
Q 017747 283 EGSFKLDQLDMF 294 (366)
Q Consensus 283 ~gsf~i~~~e~~ 294 (366)
.| |++......
T Consensus 209 aG-f~~~~~~~~ 219 (245)
T 3ggd_A 209 PD-FEILSQGEG 219 (245)
T ss_dssp TT-EEEEEEECC
T ss_pred CC-CEEEecccc
Confidence 78 998665543
No 83
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.50 E-value=1.3e-06 Score=77.80 Aligned_cols=111 Identities=19% Similarity=0.167 Sum_probs=77.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ . .+++..|+.... + -
T Consensus 67 ~~~~vLDiG~G~G~~~~~l--------------------~-~~v~~~D~s~~~-------~------------------~ 100 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSI--------------------R-NPVHCFDLASLD-------P------------------R 100 (215)
T ss_dssp TTSCEEEETCTTCHHHHHC--------------------C-SCEEEEESSCSS-------T------------------T
T ss_pred CCCeEEEECCcCCHHHHHh--------------------h-ccEEEEeCCCCC-------c------------------e
Confidence 4579999999999987531 1 567778876540 0 0
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+.. +++.+-.+|++++|+++++.++|| .+ ...+|+.-
T Consensus 101 ~~~---~d~~~~~~~~~~fD~v~~~~~l~~-~~---------------------------------------~~~~l~~~ 137 (215)
T 2zfu_A 101 VTV---CDMAQVPLEDESVDVAVFCLSLMG-TN---------------------------------------IRDFLEEA 137 (215)
T ss_dssp EEE---SCTTSCSCCTTCEEEEEEESCCCS-SC---------------------------------------HHHHHHHH
T ss_pred EEE---eccccCCCCCCCEeEEEEehhccc-cC---------------------------------------HHHHHHHH
Confidence 111 244443478899999999999996 21 12345566
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||+++++.... .+++.+++.+.+++.| |++.
T Consensus 138 ~~~L~~gG~l~i~~~~~------------------------------------------~~~~~~~~~~~l~~~G-f~~~ 174 (215)
T 2zfu_A 138 NRVLKPGGLLKVAEVSS------------------------------------------RFEDVRTFLRAVTKLG-FKIV 174 (215)
T ss_dssp HHHEEEEEEEEEEECGG------------------------------------------GCSCHHHHHHHHHHTT-EEEE
T ss_pred HHhCCCCeEEEEEEcCC------------------------------------------CCCCHHHHHHHHHHCC-CEEE
Confidence 78899999999985321 0128999999999999 8886
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
...
T Consensus 175 ~~~ 177 (215)
T 2zfu_A 175 SKD 177 (215)
T ss_dssp EEE
T ss_pred EEe
Confidence 644
No 84
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.49 E-value=1.1e-06 Score=84.92 Aligned_cols=157 Identities=18% Similarity=0.169 Sum_probs=93.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..+.. +.+. .|..+++..|+ .......-+.+. . .+. ..++
T Consensus 183 ~~~~vLDvG~G~G~~~~~--------l~~~--------~~~~~~~~~D~-~~~~~~a~~~~~-------~-~~~--~~~v 235 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAA--------IARR--------APHVSATVLEM-AGTVDTARSYLK-------D-EGL--SDRV 235 (360)
T ss_dssp TCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEEC-TTHHHHHHHHHH-------H-TTC--TTTE
T ss_pred cCcEEEEeCCcCcHHHHH--------HHHh--------CCCCEEEEecC-HHHHHHHHHHHH-------h-cCC--CCce
Confidence 457999999999998864 3232 24488999998 433222221111 1 111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
..+.+++.+ -+|.+ +|+++++..+|.+++ .+...+|+.-
T Consensus 236 --~~~~~d~~~-~~~~~-~D~v~~~~vl~~~~~-------------------------------------~~~~~~l~~~ 274 (360)
T 1tw3_A 236 --DVVEGDFFE-PLPRK-ADAIILSFVLLNWPD-------------------------------------HDAVRILTRC 274 (360)
T ss_dssp --EEEECCTTS-CCSSC-EEEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred --EEEeCCCCC-CCCCC-ccEEEEcccccCCCH-------------------------------------HHHHHHHHHH
Confidence 123357765 34554 999999999986421 1234567777
Q ss_pred HHHhccCceEEEEeec-CCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 210 SEELVVGGRMVLILLG-RIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g-~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
.+-|+|||++++.-.. .++.. . ..+..+...+ -++..| ...++.+|+++++++.| |++
T Consensus 275 ~~~L~pgG~l~i~e~~~~~~~~----~--~~~~~~~~~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~ 333 (360)
T 1tw3_A 275 AEALEPGGRILIHERDDLHENS----F--NEQFTELDLR-MLVFLG-------------GALRTREKWDGLAASAG-LVV 333 (360)
T ss_dssp HHTEEEEEEEEEEECCBCGGGC----C--SHHHHHHHHH-HHHHHS-------------CCCCBHHHHHHHHHHTT-EEE
T ss_pred HHhcCCCcEEEEEEEeccCCCC----C--cchhhhccHH-HhhhcC-------------CcCCCHHHHHHHHHHCC-CeE
Confidence 8999999999988655 32211 0 0111111111 111111 24579999999999999 998
Q ss_pred eeEEEEe
Q 017747 289 DQLDMFQ 295 (366)
Q Consensus 289 ~~~e~~~ 295 (366)
.+.....
T Consensus 334 ~~~~~~~ 340 (360)
T 1tw3_A 334 EEVRQLP 340 (360)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 7776554
No 85
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.49 E-value=1.9e-07 Score=87.41 Aligned_cols=117 Identities=14% Similarity=0.144 Sum_probs=74.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+|+..|+.......+.+........... ..-.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~------~~~~ 112 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIML--------VEE----------GFSVTSVDASDKMLKYALKERWNRRKEPAF------DKWV 112 (293)
T ss_dssp TCCEEEETTCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHHHHTTTSHHH------HTCE
T ss_pred CCCEEEEecCCCCHHHHHH--------HHC----------CCeEEEEECCHHHHHHHHHhhhhccccccc------ceee
Confidence 4579999999999988642 221 158999999764433332221000000000 0112
Q ss_pred EEeccCCCccccc---CCCCcccEEEcc-cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL---FPNNSLHFIHSS-NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~l---fp~~s~~~~~S~-~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+.. +++..-. ++++++|+++++ .++|++...... .+++..+
T Consensus 113 ~~~---~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~--------------------------------~~~~~~~ 157 (293)
T 3thr_A 113 IEE---ANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD--------------------------------QSEHRLA 157 (293)
T ss_dssp EEE---CCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS--------------------------------SHHHHHH
T ss_pred Eee---cChhhCccccccCCCeEEEEEcChHHhhcCccccC--------------------------------HHHHHHH
Confidence 223 3444333 789999999999 899998764322 1356678
Q ss_pred HHHHHHHhccCceEEEEeec
Q 017747 206 LRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g 225 (366)
|+.-++-|+|||+|++....
T Consensus 158 l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 158 LKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHcCCCeEEEEEeCC
Confidence 88889999999999999764
No 86
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.48 E-value=6.5e-07 Score=83.89 Aligned_cols=106 Identities=14% Similarity=0.149 Sum_probs=68.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCC-cceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAP-EFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p-~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
.++.+|+|+|||+|..+..+ .+ ..| ..+++..|+.......+-+... . . ..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l--------~~--------~~~~~~~v~gvD~s~~~~~~a~~~~~--------~--~--~~ 72 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVL--------MP--------LLPEGSKYTGIDSGETLLAEARELFR--------L--L--PY 72 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHH--------TT--------TSCTTCEEEEEESCHHHHHHHHHHHH--------S--S--SS
T ss_pred CCCCeEEEecCCCCHHHHHH--------HH--------hCCCCCEEEEEECCHHHHHHHHHHHH--------h--c--CC
Confidence 45789999999999988642 11 123 3789999986532222211111 0 0 11
Q ss_pred ce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++ |.. +++.+-.+ ++++|++++..++|++.+. ..+|
T Consensus 73 ~v~~~~---~d~~~~~~-~~~fD~v~~~~~l~~~~~~---------------------------------------~~~l 109 (284)
T 3gu3_A 73 DSEFLE---GDATEIEL-NDKYDIAICHAFLLHMTTP---------------------------------------ETML 109 (284)
T ss_dssp EEEEEE---SCTTTCCC-SSCEEEEEEESCGGGCSSH---------------------------------------HHHH
T ss_pred ceEEEE---cchhhcCc-CCCeeEEEECChhhcCCCH---------------------------------------HHHH
Confidence 22 333 45654334 5799999999999997442 2345
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-.+-|+|||++++..+.
T Consensus 110 ~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 110 QKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp HHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHcCCCCEEEEEecc
Confidence 5667899999999998765
No 87
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.47 E-value=1.3e-06 Score=74.86 Aligned_cols=132 Identities=18% Similarity=0.193 Sum_probs=85.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+.. +.+. . .+++..|+.......+-+. . .+-
T Consensus 16 ~~~~~vLDiG~G~G~~~~~--------l~~~--------~--~~v~~vD~s~~~~~~a~~~-----------~----~~v 62 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKY--------LLEF--------A--TKLYCIDINVIALKEVKEK-----------F----DSV 62 (170)
T ss_dssp SCCEEEEEETCTTCTTHHH--------HHTT--------E--EEEEEECSCHHHHHHHHHH-----------C----TTS
T ss_pred CCCCeEEEECCCCCHHHHH--------HHhh--------c--CeEEEEeCCHHHHHHHHHh-----------C----CCc
Confidence 3467999999999999864 2221 1 3788888864322222111 0 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.|..+ + .-++++++|+++++.++|++.+. ..+|+.
T Consensus 63 ~~~~~---d---~~~~~~~~D~v~~~~~l~~~~~~---------------------------------------~~~l~~ 97 (170)
T 3i9f_A 63 ITLSD---P---KEIPDNSVDFILFANSFHDMDDK---------------------------------------QHVISE 97 (170)
T ss_dssp EEESS---G---GGSCTTCEEEEEEESCSTTCSCH---------------------------------------HHHHHH
T ss_pred EEEeC---C---CCCCCCceEEEEEccchhcccCH---------------------------------------HHHHHH
Confidence 23332 3 34788999999999999997431 234566
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++......+.... .......+.+++++.++ | |++
T Consensus 98 ~~~~L~pgG~l~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~l~--G-f~~ 142 (170)
T 3i9f_A 98 VKRILKDDGRVIIIDWRKENTGIG--------------------------------PPLSIRMDEKDYMGWFS--N-FVV 142 (170)
T ss_dssp HHHHEEEEEEEEEEEECSSCCSSS--------------------------------SCGGGCCCHHHHHHHTT--T-EEE
T ss_pred HHHhcCCCCEEEEEEcCccccccC--------------------------------chHhhhcCHHHHHHHHh--C-cEE
Confidence 688999999999997765432100 00113368999999999 7 988
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.+...
T Consensus 143 ~~~~~ 147 (170)
T 3i9f_A 143 EKRFN 147 (170)
T ss_dssp EEEEC
T ss_pred EEccC
Confidence 66554
No 88
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.46 E-value=2.6e-07 Score=87.35 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=37.6
Q ss_pred CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEE
Q 017747 143 FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLI 222 (366)
Q Consensus 143 fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~ 222 (366)
++++++|++++...+||+.- ..-..+...+|+.-++-|+|||+|++.
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl---------------------------------~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHL---------------------------------NWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHH---------------------------------HHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCCCcCEEEEChHHHHhhh---------------------------------cCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 57889999999999999631 001246677888899999999999996
Q ss_pred e
Q 017747 223 L 223 (366)
Q Consensus 223 ~ 223 (366)
.
T Consensus 220 ~ 220 (292)
T 3g07_A 220 P 220 (292)
T ss_dssp C
T ss_pred c
Confidence 3
No 89
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.44 E-value=6.4e-07 Score=78.28 Aligned_cols=140 Identities=14% Similarity=0.124 Sum_probs=85.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
+..+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.. .. .+ .++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~-------~~-~~---~~~~ 82 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYL--------AAN----------GYDVDAWDKNAMSIANVERIK-------SI-EN---LDNL 82 (199)
T ss_dssp CSCEEEEETCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHH-------HH-HT---CTTE
T ss_pred CCCeEEEEcCCCCHHHHHH--------HHC----------CCeEEEEECCHHHHHHHHHHH-------Hh-CC---CCCc
Confidence 3569999999999988642 221 268888998653322221111 11 11 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.+.. +++.+-.+ ++++|+++++.++||++. .|...+|+.
T Consensus 83 ~~~~---~d~~~~~~-~~~~D~v~~~~~l~~~~~-------------------------------------~~~~~~l~~ 121 (199)
T 2xvm_A 83 HTRV---VDLNNLTF-DRQYDFILSTVVLMFLEA-------------------------------------KTIPGLIAN 121 (199)
T ss_dssp EEEE---CCGGGCCC-CCCEEEEEEESCGGGSCG-------------------------------------GGHHHHHHH
T ss_pred EEEE---cchhhCCC-CCCceEEEEcchhhhCCH-------------------------------------HHHHHHHHH
Confidence 2333 45544334 889999999999999642 123456777
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.........+ .+ ....+..+.+|+++.++. |++
T Consensus 122 ~~~~L~~gG~l~~~~~~~~~~~~---------------------~~----------~~~~~~~~~~~l~~~~~~---f~~ 167 (199)
T 2xvm_A 122 MQRCTKPGGYNLIVAAMDTADYP---------------------CT----------VGFPFAFKEGELRRYYEG---WER 167 (199)
T ss_dssp HHHTEEEEEEEEEEEEBCCSSSC---------------------CC----------SCCSCCBCTTHHHHHTTT---SEE
T ss_pred HHHhcCCCeEEEEEEeeccCCcC---------------------CC----------CCCCCccCHHHHHHHhcC---CeE
Confidence 78999999998876543322100 00 111245689999999975 888
Q ss_pred eeEEE
Q 017747 289 DQLDM 293 (366)
Q Consensus 289 ~~~e~ 293 (366)
.+.+.
T Consensus 168 ~~~~~ 172 (199)
T 2xvm_A 168 VKYNE 172 (199)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 77654
No 90
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.43 E-value=4.4e-07 Score=84.73 Aligned_cols=139 Identities=13% Similarity=0.177 Sum_probs=86.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|.++.. +.+. ..+|+..|+.......+-+.+. . .+ ..-.
T Consensus 120 ~~~~vLD~GcG~G~~~~~--------l~~~----------g~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~~ 170 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLY--------LSLL----------GYDVTSWDHNENSIAFLNETKE-------K-EN---LNIS 170 (286)
T ss_dssp CSCEEEEESCTTCHHHHH--------HHHT----------TCEEEEEESCHHHHHHHHHHHH-------H-TT---CCEE
T ss_pred CCCcEEEECCCCCHHHHH--------HHHC----------CCeEEEEECCHHHHHHHHHHHH-------H-cC---CceE
Confidence 468999999999999875 2221 2688999986543332222111 1 11 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+-.+ ++++|+++++.++||++. | ++..+|+.-
T Consensus 171 ~~~---~d~~~~~~-~~~fD~i~~~~~~~~~~~-~------------------------------------~~~~~l~~~ 209 (286)
T 3m70_A 171 TAL---YDINAANI-QENYDFIVSTVVFMFLNR-E------------------------------------RVPSIIKNM 209 (286)
T ss_dssp EEE---CCGGGCCC-CSCEEEEEECSSGGGSCG-G------------------------------------GHHHHHHHH
T ss_pred EEE---eccccccc-cCCccEEEEccchhhCCH-H------------------------------------HHHHHHHHH
Confidence 333 45544333 889999999999999743 1 234567777
Q ss_pred HHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 210 SEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
.+-|+|||++++.........+. -..+.+..+.+|+++.++. |++.
T Consensus 210 ~~~LkpgG~l~i~~~~~~~~~~~-------------------------------~~~~~~~~~~~~l~~~~~~---~~~~ 255 (286)
T 3m70_A 210 KEHTNVGGYNLIVAAMSTDDVPC-------------------------------PLPFSFTFAENELKEYYKD---WEFL 255 (286)
T ss_dssp HHTEEEEEEEEEEEEBCCSSSCC-------------------------------SSCCSCCBCTTHHHHHTTT---SEEE
T ss_pred HHhcCCCcEEEEEEecCCCCCCC-------------------------------CCCccccCCHHHHHHHhcC---CEEE
Confidence 89999999988876544321100 0123466788899888864 8886
Q ss_pred eEE
Q 017747 290 QLD 292 (366)
Q Consensus 290 ~~e 292 (366)
..+
T Consensus 256 ~~~ 258 (286)
T 3m70_A 256 EYN 258 (286)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 91
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.39 E-value=5.7e-07 Score=79.47 Aligned_cols=156 Identities=13% Similarity=0.087 Sum_probs=91.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+... +.+ +..+++..|........+-+.+. . .+ ..-
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~-------~~~----------~~~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~ 73 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSI-------FVE----------DGYKTYGIEISDLQLKKAENFSR-------E-NN---FKL 73 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHH-------HHH----------TTCEEEEEECCHHHHHHHHHHHH-------H-HT---CCC
T ss_pred CCCCEEEEECCCCCHHHHHH-------HHh----------CCCEEEEEECCHHHHHHHHHHHH-------h-cC---Cce
Confidence 34689999999999987532 111 12689999986543332222111 1 11 111
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.+.. +++.+-.+|++++|+++++.++|+++ . .|...+|+.
T Consensus 74 ~~~~---~d~~~~~~~~~~fD~v~~~~~l~~~~---~----------------------------------~~~~~~l~~ 113 (209)
T 2p8j_A 74 NISK---GDIRKLPFKDESMSFVYSYGTIFHMR---K----------------------------------NDVKEAIDE 113 (209)
T ss_dssp CEEE---CCTTSCCSCTTCEEEEEECSCGGGSC---H----------------------------------HHHHHHHHH
T ss_pred EEEE---CchhhCCCCCCceeEEEEcChHHhCC---H----------------------------------HHHHHHHHH
Confidence 2333 34544347889999999999999862 1 244566778
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++..+...+.... .+. .+. +..... ..+.......+.+.+|+...++..| |..
T Consensus 114 ~~~~LkpgG~l~~~~~~~~~~~~~-~~~-~~~------------~~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~g-~~~ 177 (209)
T 2p8j_A 114 IKRVLKPGGLACINFLTTKDERYN-KGE-KIG------------EGEFLQ-LERGEKVIHSYVSLEEADKYFKDMK-VLF 177 (209)
T ss_dssp HHHHEEEEEEEEEEEEETTSTTTT-CSE-EEE------------TTEEEE-CC-CCCEEEEEECHHHHHHTTTTSE-EEE
T ss_pred HHHHcCCCcEEEEEEecccchhcc-chh-hhc------------ccccee-ccCCCceeEEecCHHHHHHHHhhcC-cee
Confidence 889999999999999887543111 000 000 000000 0011122236778999999999887 443
No 92
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.38 E-value=7.1e-06 Score=79.29 Aligned_cols=150 Identities=17% Similarity=0.168 Sum_probs=90.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ .|..+++.-|+|. . ...... .++
T Consensus 188 ~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~-~----~~~a~~-------------~~~- 232 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKI--------ICET--------FPKLKCIVFDRPQ-V----VENLSG-------------SNN- 232 (352)
T ss_dssp TCSEEEEETCTTSHHHHH--------HHHH--------CTTCEEEEEECHH-H----HTTCCC-------------BTT-
T ss_pred cCceEEEeCCCccHHHHH--------HHHH--------CCCCeEEEeeCHH-H----Hhhccc-------------CCC-
Confidence 457999999999998864 3332 2447899999841 1 111110 112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+..+.++|++ -+|+ +|++++++++|.+++ .+...+|+.-
T Consensus 233 -v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d-------------------------------------~~~~~~l~~~ 271 (352)
T 1fp2_A 233 -LTYVGGDMFT-SIPN--ADAVLLKYILHNWTD-------------------------------------KDCLRILKKC 271 (352)
T ss_dssp -EEEEECCTTT-CCCC--CSEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred -cEEEeccccC-CCCC--ccEEEeehhhccCCH-------------------------------------HHHHHHHHHH
Confidence 2234568877 4563 999999999996432 1233567788
Q ss_pred HHHhcc---CceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 210 SEELVV---GGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 210 a~EL~~---GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.+-|+| ||++++.-...++.. ....... ...+.++.- +. +. -..++.+|+++++++.| |
T Consensus 272 ~~~L~p~~~gG~l~i~e~~~~~~~----~~~~~~~--~~~~~d~~~--------~~-~~--g~~~t~~e~~~ll~~aG-f 333 (352)
T 1fp2_A 272 KEAVTNDGKRGKVTIIDMVIDKKK----DENQVTQ--IKLLMDVNM--------AC-LN--GKERNEEEWKKLFIEAG-F 333 (352)
T ss_dssp HHHHSGGGCCCEEEEEECEECTTT----SCHHHHH--HHHHHHHHG--------GG-GT--CCCEEHHHHHHHHHHTT-C
T ss_pred HHhCCCCCCCcEEEEEEeecCCCC----Cccchhh--hHhhccHHH--------Hh-cc--CCCCCHHHHHHHHHHCC-C
Confidence 899999 999998865544321 0000111 112222210 00 11 23468999999999999 8
Q ss_pred EEeeEEE
Q 017747 287 KLDQLDM 293 (366)
Q Consensus 287 ~i~~~e~ 293 (366)
++.+...
T Consensus 334 ~~~~~~~ 340 (352)
T 1fp2_A 334 QHYKISP 340 (352)
T ss_dssp CEEEEEE
T ss_pred CeeEEEe
Confidence 8765543
No 93
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.38 E-value=1.2e-06 Score=78.87 Aligned_cols=106 Identities=18% Similarity=0.188 Sum_probs=67.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+. + .+++..|+.......+-+.++ +-
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l--------~~~-----~-----~~v~~~D~s~~~~~~a~~~~~---------------~~ 85 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHF--------TKE-----F-----GDTAGLELSEDMLTHARKRLP---------------DA 85 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHH--------HHH-----H-----SEEEEEESCHHHHHHHHHHCT---------------TC
T ss_pred CCCCeEEEecccCCHHHHHH--------HHh-----C-----CcEEEEeCCHHHHHHHHHhCC---------------CC
Confidence 34689999999999998753 222 1 267888875432222221111 11
Q ss_pred eEEeccCCCcccccCCCCcccEEEc-ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHS-SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S-~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
-+.. +++.+ +-+++++|+++| ..++||+.. ..|+..+|+
T Consensus 86 ~~~~---~d~~~-~~~~~~~D~v~~~~~~~~~~~~------------------------------------~~~~~~~l~ 125 (239)
T 3bxo_A 86 TLHQ---GDMRD-FRLGRKFSAVVSMFSSVGYLKT------------------------------------TEELGAAVA 125 (239)
T ss_dssp EEEE---CCTTT-CCCSSCEEEEEECTTGGGGCCS------------------------------------HHHHHHHHH
T ss_pred EEEE---CCHHH-cccCCCCcEEEEcCchHhhcCC------------------------------------HHHHHHHHH
Confidence 2333 35533 223779999995 559999643 135566788
Q ss_pred HHHHHhccCceEEEEeecCC
Q 017747 208 SRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~ 227 (366)
.-.+-|+|||++++......
T Consensus 126 ~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 126 SFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp HHHHTEEEEEEEEECCCCCT
T ss_pred HHHHhcCCCeEEEEEeccCc
Confidence 88999999999999865443
No 94
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.35 E-value=5e-06 Score=80.53 Aligned_cols=151 Identities=17% Similarity=0.157 Sum_probs=90.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.++ .|..+++.-|+|. .- ..... .++
T Consensus 193 ~~~~vlDvG~G~G~~~~~--------l~~~--------~p~~~~~~~D~~~--~~---~~a~~-------------~~~- 237 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKL--------IHEI--------FPHLKCTVFDQPQ--VV---GNLTG-------------NEN- 237 (358)
T ss_dssp TCSEEEEETCTTSHHHHH--------HHHH--------CTTSEEEEEECHH--HH---SSCCC-------------CSS-
T ss_pred CCCEEEEECCCcCHHHHH--------HHHH--------CCCCeEEEeccHH--HH---hhccc-------------CCC-
Confidence 357999999999998874 3332 2447888889852 11 11110 112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+..+.++|++ -+| ++|++++++.+|++++ .+...+|+.-
T Consensus 238 -v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d-------------------------------------~~~~~~l~~~ 276 (358)
T 1zg3_A 238 -LNFVGGDMFK-SIP--SADAVLLKWVLHDWND-------------------------------------EQSLKILKNS 276 (358)
T ss_dssp -EEEEECCTTT-CCC--CCSEEEEESCGGGSCH-------------------------------------HHHHHHHHHH
T ss_pred -cEEEeCccCC-CCC--CceEEEEcccccCCCH-------------------------------------HHHHHHHHHH
Confidence 2334578877 456 4999999999998543 1234567788
Q ss_pred HHHhcc---CceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 210 SEELVV---GGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 210 a~EL~~---GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.+-|+| ||++++.-...++... .........+.. +.-|+..| -..++.+|+++++++.| |
T Consensus 277 ~~~L~p~~~gG~l~i~e~~~~~~~~--~~~~~~~~~~~d-~~~~~~~~-------------g~~~t~~e~~~ll~~aG-f 339 (358)
T 1zg3_A 277 KEAISHKGKDGKVIIIDISIDETSD--DRGLTELQLDYD-LVMLTMFL-------------GKERTKQEWEKLIYDAG-F 339 (358)
T ss_dssp HHHTGGGGGGCEEEEEECEECTTCS--CHHHHHHHHHHH-HHHHHHHS-------------CCCEEHHHHHHHHHHTT-C
T ss_pred HHhCCCCCCCcEEEEEEeccCCCCc--cchhhhHHHhhC-HHHhccCC-------------CCCCCHHHHHHHHHHcC-C
Confidence 899999 9999987554432210 000000011111 11111111 12469999999999999 8
Q ss_pred EEeeEEE
Q 017747 287 KLDQLDM 293 (366)
Q Consensus 287 ~i~~~e~ 293 (366)
++.++..
T Consensus 340 ~~~~~~~ 346 (358)
T 1zg3_A 340 SSYKITP 346 (358)
T ss_dssp CEEEEEE
T ss_pred CeeEEEe
Confidence 8766543
No 95
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.34 E-value=5.6e-07 Score=82.71 Aligned_cols=149 Identities=16% Similarity=0.093 Sum_probs=82.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..|.. +.++ .. .+|+..|+..++.....+..+... ... ..+
T Consensus 36 ~~g~~VLDiGcGtG~~t~~--------la~~--------g~-~~V~gvDis~~ml~~a~~~~~~~~-----~~~---~~~ 90 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDV--------MLQN--------GA-KLVYALDVGTNQLAWKIRSDERVV-----VME---QFN 90 (232)
T ss_dssp CTTCEEEEETCTTSHHHHH--------HHHT--------TC-SEEEEECSSCCCCCHHHHTCTTEE-----EEC---SCC
T ss_pred CCCCEEEEEccCCCHHHHH--------HHhc--------CC-CEEEEEcCCHHHHHHHHHhCcccc-----ccc---cce
Confidence 3457999999999999864 2221 11 489999998876554322221100 000 001
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+ ....+.++...+++..++|+++++. + .+|..
T Consensus 91 ~-~~~~~~~~~~~~~d~~~~D~v~~~l--------~---------------------------------------~~l~~ 122 (232)
T 3opn_A 91 F-RNAVLADFEQGRPSFTSIDVSFISL--------D---------------------------------------LILPP 122 (232)
T ss_dssp G-GGCCGGGCCSCCCSEEEECCSSSCG--------G---------------------------------------GTHHH
T ss_pred E-EEeCHhHcCcCCCCEEEEEEEhhhH--------H---------------------------------------HHHHH
Confidence 1 0111233433345555677666542 1 12445
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-.+-|+|||++++.+ .+ .++ ..+..+-..|.+... ..+..+.+++.+.+++.| |++
T Consensus 123 i~rvLkpgG~lv~~~--~p-----------~~e---~~~~~~~~~G~~~d~-------~~~~~~~~~l~~~l~~aG-f~v 178 (232)
T 3opn_A 123 LYEILEKNGEVAALI--KP-----------QFE---AGREQVGKNGIIRDP-------KVHQMTIEKVLKTATQLG-FSV 178 (232)
T ss_dssp HHHHSCTTCEEEEEE--CH-----------HHH---SCHHHHC-CCCCCCH-------HHHHHHHHHHHHHHHHHT-EEE
T ss_pred HHHhccCCCEEEEEE--Cc-----------ccc---cCHHHhCcCCeecCc-------chhHHHHHHHHHHHHHCC-CEE
Confidence 588999999999965 11 122 222222223433221 123348999999999999 998
Q ss_pred eeEEEE
Q 017747 289 DQLDMF 294 (366)
Q Consensus 289 ~~~e~~ 294 (366)
..++..
T Consensus 179 ~~~~~~ 184 (232)
T 3opn_A 179 KGLTFS 184 (232)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 777643
No 96
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.33 E-value=3.1e-06 Score=78.11 Aligned_cols=107 Identities=14% Similarity=0.080 Sum_probs=70.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-e
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS-V 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~-~ 129 (366)
-.+|+|+|||+|..|..+...+ | |+-.|+.-|........+-+... . .++ .
T Consensus 78 G~~VldlG~G~G~~~~~la~~V------------G---~~G~V~avD~s~~~~~~l~~~a~-----------~--~~ni~ 129 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDII------------G---PRGRIYGVEFAPRVMRDLLTVVR-----------D--RRNIF 129 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH------------C---TTCEEEEEECCHHHHHHHHHHST-----------T--CTTEE
T ss_pred CCEEEEecCcCCHHHHHHHHHh------------C---CCceEEEEeCCHHHHHHHHHhhH-----------h--hcCee
Confidence 4899999999999998643333 2 45789999986543322222111 1 223 4
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
.+.+..+....-.++.+++|++|+..+.||- -..++..-
T Consensus 130 ~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~~-----------------------------------------~~~~l~~~ 168 (233)
T 4df3_A 130 PILGDARFPEKYRHLVEGVDGLYADVAQPEQ-----------------------------------------AAIVVRNA 168 (233)
T ss_dssp EEESCTTCGGGGTTTCCCEEEEEECCCCTTH-----------------------------------------HHHHHHHH
T ss_pred EEEEeccCccccccccceEEEEEEeccCChh-----------------------------------------HHHHHHHH
Confidence 5666666665556788999999876555541 11235566
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|||||+++++.-.+
T Consensus 169 ~r~LKpGG~lvI~ik~r 185 (233)
T 4df3_A 169 RFFLRDGGYMLMAIKAR 185 (233)
T ss_dssp HHHEEEEEEEEEEEECC
T ss_pred HHhccCCCEEEEEEecc
Confidence 78899999999987544
No 97
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.33 E-value=3e-06 Score=75.77 Aligned_cols=165 Identities=15% Similarity=0.152 Sum_probs=90.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++. +.+. .|..+++..|+.......+-+.+. ..+ ..++
T Consensus 42 ~~~vLDiGcG~G~~~~~--------la~~--------~p~~~v~gvD~s~~~l~~a~~~~~--------~~~---~~~v~ 94 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSG--------MAKQ--------NPDINYIGIDIQKSVLSYALDKVL--------EVG---VPNIK 94 (214)
T ss_dssp CCEEEEESCTTSHHHHH--------HHHH--------CTTSEEEEEESCHHHHHHHHHHHH--------HHC---CSSEE
T ss_pred CCeEEEEccCcCHHHHH--------HHHH--------CCCCCEEEEEcCHHHHHHHHHHHH--------HcC---CCCEE
Confidence 56899999999999874 2232 245889999986543322222111 111 1233
Q ss_pred EEeccCCCccc--ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYG--RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~--~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
++.+ +..+ ..+|++++|+++++...+|...-.. . .. -+...||+
T Consensus 95 ~~~~---d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~---~--------~~--------------------~~~~~~l~ 140 (214)
T 1yzh_A 95 LLWV---DGSDLTDYFEDGEIDRLYLNFSDPWPKKRHE---K--------RR--------------------LTYKTFLD 140 (214)
T ss_dssp EEEC---CSSCGGGTSCTTCCSEEEEESCCCCCSGGGG---G--------GS--------------------TTSHHHHH
T ss_pred EEeC---CHHHHHhhcCCCCCCEEEEECCCCccccchh---h--------hc--------------------cCCHHHHH
Confidence 4443 4333 3478899999999987766331100 0 00 01344667
Q ss_pred HHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchh-hhcccCccccCCCHHHHHHHHhhcCce
Q 017747 208 SRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKE-KLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e-~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
.-.+-|+|||++++..-.. .. .......+.+.|.-..+ ..|-...+.......++..-....| +
T Consensus 141 ~~~~~LkpgG~l~~~~~~~-----------~~---~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~t~~e~~~~~~g-~ 205 (214)
T 1yzh_A 141 TFKRILPENGEIHFKTDNR-----------GL---FEYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKG-Q 205 (214)
T ss_dssp HHHHHSCTTCEEEEEESCH-----------HH---HHHHHHHHHHHTCEEEEEESSGGGSCCCCCCCCHHHHHTGGGC-C
T ss_pred HHHHHcCCCcEEEEEeCCH-----------HH---HHHHHHHHHHCCCeeeeccccccccCCCCCCCcHHHHHHHHCC-C
Confidence 7788999999999975211 11 23333334445632111 1122222333344567777777787 5
Q ss_pred EEeeE
Q 017747 287 KLDQL 291 (366)
Q Consensus 287 ~i~~~ 291 (366)
.|-++
T Consensus 206 ~i~~~ 210 (214)
T 1yzh_A 206 VIYRV 210 (214)
T ss_dssp CCEEE
T ss_pred CeEEE
Confidence 55444
No 98
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.29 E-value=6.1e-07 Score=80.21 Aligned_cols=108 Identities=14% Similarity=0.217 Sum_probs=67.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+. .+ +++..|+.......+-+.+ .. .+ ..-.
T Consensus 38 ~~~~vLDlG~G~G~~~~~--------l~~~--------~~--~v~~vD~s~~~~~~a~~~~-------~~-~~---~~~~ 88 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFL--------LEDY--------GF--EVVGVDISEDMIRKAREYA-------KS-RE---SNVE 88 (227)
T ss_dssp SCCEEEEETCTTSHHHHH--------HHHT--------TC--EEEEEESCHHHHHHHHHHH-------HH-TT---CCCE
T ss_pred CCCeEEEEeccCCHHHHH--------HHHc--------CC--EEEEEECCHHHHHHHHHHH-------Hh-cC---CCce
Confidence 368999999999998764 2221 12 7888888643222221111 11 11 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++.+-.+|++++|+++++.++|+... .|...+|+.-
T Consensus 89 ~~~---~d~~~~~~~~~~~D~v~~~~~~~~~~~-------------------------------------~~~~~~l~~~ 128 (227)
T 1ve3_A 89 FIV---GDARKLSFEDKTFDYVIFIDSIVHFEP-------------------------------------LELNQVFKEV 128 (227)
T ss_dssp EEE---CCTTSCCSCTTCEEEEEEESCGGGCCH-------------------------------------HHHHHHHHHH
T ss_pred EEE---CchhcCCCCCCcEEEEEEcCchHhCCH-------------------------------------HHHHHHHHHH
Confidence 333 455544478889999999988554211 2345567788
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||++++.....
T Consensus 129 ~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 129 RRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp HHHEEEEEEEEEEEECH
T ss_pred HHHcCCCcEEEEEecCh
Confidence 89999999999997754
No 99
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.27 E-value=4e-06 Score=72.44 Aligned_cols=71 Identities=13% Similarity=0.058 Sum_probs=51.4
Q ss_pred CCCCcccEEEcccccccc-cCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEE
Q 017747 143 FPNNSLHFIHSSNSLHWL-SKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVL 221 (366)
Q Consensus 143 fp~~s~~~~~S~~alhWl-s~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl 221 (366)
+|++++|+++|++++||+ .+. ..+|+.-++-|+|||++++
T Consensus 59 ~~~~~fD~V~~~~~l~~~~~~~---------------------------------------~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 59 HKESSFDIILSGLVPGSTTLHS---------------------------------------AEILAEIARILRPGGCLFL 99 (176)
T ss_dssp CCSSCEEEEEECCSTTCCCCCC---------------------------------------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCEeEEEECChhhhcccCH---------------------------------------HHHHHHHHHHCCCCEEEEE
Confidence 378899999999999998 331 1235666899999999999
Q ss_pred EeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEEe
Q 017747 222 ILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKLD 289 (366)
Q Consensus 222 ~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i~ 289 (366)
....... .+ .+.|.++.+++.+.+++.| | +.
T Consensus 100 ~~~~~~~------------------------~~-----------~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 100 KEPVETA------------------------VD-----------NNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp EEEEESS------------------------SC-----------SSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred Ecccccc------------------------cc-----------cccccCCHHHHHHHHHHCC-C-cE
Confidence 5322110 00 0556778899999999998 7 65
No 100
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.27 E-value=4.1e-06 Score=72.56 Aligned_cols=73 Identities=15% Similarity=0.116 Sum_probs=48.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+ .. +|+..|+....... . .+--
T Consensus 23 ~~~~vLD~GcG~G~~~~~l--------~~--------~~---~v~gvD~s~~~~~~-----~--------------~~~~ 64 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQL--------RK--------RN---TVVSTDLNIRALES-----H--------------RGGN 64 (170)
T ss_dssp CSCEEEEETCTTCHHHHHH--------TT--------TS---EEEEEESCHHHHHT-----C--------------SSSC
T ss_pred CCCeEEEeccCccHHHHHH--------Hh--------cC---cEEEEECCHHHHhc-----c--------------cCCe
Confidence 3469999999999988742 11 11 88888986432211 0 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCC
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVP 164 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p 164 (366)
++. +++.+ .++++++|+++|+..+||.+..+
T Consensus 65 ~~~---~d~~~-~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 65 LVR---ADLLC-SINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp EEE---CSTTT-TBCGGGCSEEEECCCCBTTCCCT
T ss_pred EEE---CChhh-hcccCCCCEEEECCCCccCCccc
Confidence 333 45655 56779999999999999987753
No 101
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.25 E-value=2e-06 Score=76.15 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=61.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+ .+..+++..|+.......+-+.+. ..+. ..--
T Consensus 60 ~~~~vLDiG~G~G~~~~~--------l~~---------~~~~~v~~vD~s~~~~~~a~~~~~--------~~~~--~~v~ 112 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIA--------AHK---------LGAKSVLATDISDESMTAAEENAA--------LNGI--YDIA 112 (205)
T ss_dssp SCCEEEEETCTTSHHHHH--------HHH---------TTCSEEEEEESCHHHHHHHHHHHH--------HTTC--CCCE
T ss_pred CCCEEEEECCCCCHHHHH--------HHH---------CCCCEEEEEECCHHHHHHHHHHHH--------HcCC--CceE
Confidence 457999999999988764 222 122588999986432222211111 1111 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+.. +++.+ ++++++|+++++..+||+. .+|+.-
T Consensus 113 ~~~---~d~~~--~~~~~fD~i~~~~~~~~~~------------------------------------------~~l~~~ 145 (205)
T 3grz_A 113 LQK---TSLLA--DVDGKFDLIVANILAEILL------------------------------------------DLIPQL 145 (205)
T ss_dssp EEE---SSTTT--TCCSCEEEEEEESCHHHHH------------------------------------------HHGGGS
T ss_pred EEe---ccccc--cCCCCceEEEECCcHHHHH------------------------------------------HHHHHH
Confidence 333 45533 4568999999988777642 223344
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||+++++....
T Consensus 146 ~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 146 DSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp GGGEEEEEEEEEEEEEG
T ss_pred HHhcCCCCEEEEEecCc
Confidence 78899999999975443
No 102
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.24 E-value=3.2e-06 Score=77.02 Aligned_cols=106 Identities=16% Similarity=0.253 Sum_probs=65.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+++..|+.......+-+.+. . .+ ..-.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l--------~~~----------~~~v~gvD~s~~~l~~a~~~~~-------~-~~---~~v~ 91 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLEL--------AER----------GYEVVGLDLHEEMLRVARRKAK-------E-RN---LKIE 91 (252)
T ss_dssp CCCEEEEETCTTCHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHHH-------H-TT---CCCE
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHC----------CCeEEEEECCHHHHHHHHHHHH-------h-cC---CceE
Confidence 4579999999999988742 221 1688999986543322222111 1 11 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+. +++.+ +-+++++|++++.. .+|+++ ..|...+|+.
T Consensus 92 ~~~---~d~~~-~~~~~~fD~v~~~~~~~~~~~-------------------------------------~~~~~~~l~~ 130 (252)
T 1wzn_A 92 FLQ---GDVLE-IAFKNEFDAVTMFFSTIMYFD-------------------------------------EEDLRKLFSK 130 (252)
T ss_dssp EEE---SCGGG-CCCCSCEEEEEECSSGGGGSC-------------------------------------HHHHHHHHHH
T ss_pred EEE---CChhh-cccCCCccEEEEcCCchhcCC-------------------------------------HHHHHHHHHH
Confidence 333 45544 33357899999863 444431 1245667788
Q ss_pred HHHHhccCceEEEEeec
Q 017747 209 RSEELVVGGRMVLILLG 225 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g 225 (366)
-.+-|+|||++++.+..
T Consensus 131 ~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 131 VAEALKPGGVFITDFPC 147 (252)
T ss_dssp HHHHEEEEEEEEEEEEC
T ss_pred HHHHcCCCeEEEEeccc
Confidence 88999999999998764
No 103
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.22 E-value=8.5e-07 Score=80.52 Aligned_cols=137 Identities=18% Similarity=0.245 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHHH-------HHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEe
Q 017747 23 SLQKKASDTVKHITLEAL-------QQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYL 95 (366)
Q Consensus 23 ~~Q~~~~~~~~~~l~~ai-------~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~ 95 (366)
..|++.++...|.+.-.. ..++ ....-+|+|+|||+|..++. +.+. .|..+|+.
T Consensus 3 ~~q~~~~~~~~~~~~~~~~~~~~d~~~~f---~~~~~~vLDiGcG~G~~~~~--------lA~~--------~p~~~v~g 63 (218)
T 3dxy_A 3 SGQEHALENYWPVMGVEFSEDMLDFPALF---GREAPVTLEIGFGMGASLVA--------MAKD--------RPEQDFLG 63 (218)
T ss_dssp ----CHHHHHHHHHBCCCCSSCCCHHHHH---SSCCCEEEEESCTTCHHHHH--------HHHH--------CTTSEEEE
T ss_pred HHHHHHHHHHhHHhCCCCCCCCCCHHHHc---CCCCCeEEEEeeeChHHHHH--------HHHH--------CCCCeEEE
Confidence 457777777777654110 0111 12356899999999999875 3232 34588999
Q ss_pred cCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-EEeccCCCcc---cccCCCCcccEEEcccccccccCCCCcccccc
Q 017747 96 NDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV-YIAGYPGSFY---GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEM 171 (366)
Q Consensus 96 nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~-f~~~vpgSFy---~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~ 171 (366)
.|+..+....+-+... ..+ ..++ |+. ++.. ...+|++++|.+++++...|-.... .
T Consensus 64 iD~s~~~l~~a~~~~~--------~~~---l~nv~~~~---~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~----~-- 123 (218)
T 3dxy_A 64 IEVHSPGVGACLASAH--------EEG---LSNLRVMC---HDAVEVLHKMIPDNSLRMVQLFFPDPWHKARH----N-- 123 (218)
T ss_dssp ECSCHHHHHHHHHHHH--------HTT---CSSEEEEC---SCHHHHHHHHSCTTCEEEEEEESCCCCCSGGG----G--
T ss_pred EEecHHHHHHHHHHHH--------HhC---CCcEEEEE---CCHHHHHHHHcCCCChheEEEeCCCCccchhh----h--
Confidence 9997643333322111 111 2233 333 3443 3358999999999998888833211 0
Q ss_pred cCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEe
Q 017747 172 GESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 172 ~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
+.++. . ..||+.-++-|+|||++++..
T Consensus 124 -----~rr~~-----~---------------~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 124 -----KRRIV-----Q---------------VPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp -----GGSSC-----S---------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred -----hhhhh-----h---------------HHHHHHHHHHcCCCcEEEEEe
Confidence 00000 0 136777789999999999986
No 104
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.21 E-value=2.3e-06 Score=76.47 Aligned_cols=159 Identities=13% Similarity=0.086 Sum_probs=85.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
...+|+|+|||+|..+.. +.+. .|..+|+..|+.......+.+..... . ...+ .++
T Consensus 27 ~~~~vLDiGcG~G~~~~~--------la~~--------~p~~~v~gvD~s~~~l~~~~~~a~~~---~-~~~~---~~~v 83 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYK--------VARQ--------NPSRLVVALDADKSRMEKISAKAAAK---P-AKGG---LPNL 83 (218)
T ss_dssp SSEEEEEESCTTCHHHHH--------HHHH--------CTTEEEEEEESCGGGGHHHHHHHTSC---G-GGTC---CTTE
T ss_pred CCCEEEEecCCCCHHHHH--------HHHH--------CCCCEEEEEECCHHHHHHHHHHHHHh---h-hhcC---CCce
Confidence 468999999999999875 3232 24489999999876555432111100 0 0011 223
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.|.. +++.+-.+++++ |.++ ..+.|....... -.|...+|+.
T Consensus 84 ~~~~---~d~~~l~~~~~~-d~v~--~~~~~~~~~~~~--------------------------------~~~~~~~l~~ 125 (218)
T 3mq2_A 84 LYLW---ATAERLPPLSGV-GELH--VLMPWGSLLRGV--------------------------------LGSSPEMLRG 125 (218)
T ss_dssp EEEE---CCSTTCCSCCCE-EEEE--EESCCHHHHHHH--------------------------------HTSSSHHHHH
T ss_pred EEEe---cchhhCCCCCCC-CEEE--EEccchhhhhhh--------------------------------hccHHHHHHH
Confidence 3444 456554467766 7666 333332211000 0111234666
Q ss_pred HHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCceEE
Q 017747 209 RSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSFKL 288 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf~i 288 (366)
-++-|+|||++++++....-.... . +......+......+++...+++.| |++
T Consensus 126 ~~~~LkpgG~l~~~~~~~~~~~~~------------------------~--~~~~~~~~~~~~~~~~l~~~l~~aG-f~i 178 (218)
T 3mq2_A 126 MAAVCRPGASFLVALNLHAWRPSV------------------------P--EVGEHPEPTPDSADEWLAPRYAEAG-WKL 178 (218)
T ss_dssp HHHTEEEEEEEEEEEEGGGBTTBC------------------------G--GGTTCCCCCHHHHHHHHHHHHHHTT-EEE
T ss_pred HHHHcCCCcEEEEEeccccccccc------------------------c--ccccCCccchHHHHHHHHHHHHHcC-CCc
Confidence 789999999999976433211000 0 0011111111113456888999999 999
Q ss_pred eeEEEEee
Q 017747 289 DQLDMFQV 296 (366)
Q Consensus 289 ~~~e~~~~ 296 (366)
..++.+..
T Consensus 179 ~~~~~~~~ 186 (218)
T 3mq2_A 179 ADCRYLEP 186 (218)
T ss_dssp EEEEEECH
T ss_pred eeeeccch
Confidence 88887643
No 105
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.19 E-value=2.2e-06 Score=80.39 Aligned_cols=100 Identities=10% Similarity=0.003 Sum_probs=64.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|+.+ .++ ..+|+..|+..++...+-+.+.. .
T Consensus 45 ~g~~VLDlGcGtG~~a~~L--------a~~----------g~~V~gvD~S~~ml~~Ar~~~~~---------------~- 90 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKA--------LER----------GASVTVFDFSQRMCDDLAEALAD---------------R- 90 (261)
T ss_dssp TTCEEEEECTTCHHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHTSS---------------S-
T ss_pred CcCEEEEEeCcchHHHHHH--------Hhc----------CCEEEEEECCHHHHHHHHHHHHh---------------c-
Confidence 4579999999999998753 221 16799999876544433332221 1
Q ss_pred EEeccCCCccccc-----CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-----FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 130 f~~~vpgSFy~~l-----fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
.+.+++..-. .+++++|+++|+.++||+.. .|...
T Consensus 91 ---~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~-------------------------------------~~~~~ 130 (261)
T 3iv6_A 91 ---CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTT-------------------------------------EEARR 130 (261)
T ss_dssp ---CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCH-------------------------------------HHHHH
T ss_pred ---cceeeeeecccccccccCCCccEEEEhhhhHhCCH-------------------------------------HHHHH
Confidence 1112222111 12678999999999998632 23344
Q ss_pred HHHHHHHHhccCceEEEEee
Q 017747 205 FLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.|+.-++-| |||++++++.
T Consensus 131 ~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 131 ACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp HHHHHHHHH-TTSEEEEEEE
T ss_pred HHHHHHHhC-cCcEEEEEec
Confidence 456667778 9999999975
No 106
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.17 E-value=4.9e-06 Score=73.32 Aligned_cols=123 Identities=14% Similarity=0.081 Sum_probs=76.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..+..+ .+. .+ .+++..|+.......+-+.... . ..-
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l--------~~~--------~~-~~v~~~D~s~~~~~~a~~~~~~----------~--~~i 91 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYEL--------FLG--------GF-PNVTSVDYSSVVVAAMQACYAH----------V--PQL 91 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHH--------HHT--------TC-CCEEEEESCHHHHHHHHHHTTT----------C--TTC
T ss_pred CCCCeEEEECCCCcHHHHHH--------HHc--------CC-CcEEEEeCCHHHHHHHHHhccc----------C--CCc
Confidence 34679999999999988742 221 12 2788888865433322222210 0 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.+.. +++.+-.++++++|+++++.++|.+...... .|+.. .....|...+|+.
T Consensus 92 ~~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~-------~~~~~-----------------~~~~~~~~~~l~~ 144 (215)
T 2pxx_A 92 RWET---MDVRKLDFPSASFDVVLEKGTLDALLAGERD-------PWTVS-----------------SEGVHTVDQVLSE 144 (215)
T ss_dssp EEEE---CCTTSCCSCSSCEEEEEEESHHHHHTTTCSC-------TTSCC-----------------HHHHHHHHHHHHH
T ss_pred EEEE---cchhcCCCCCCcccEEEECcchhhhcccccc-------ccccc-----------------cchhHHHHHHHHH
Confidence 2333 3444434788999999999999876532111 11110 1124567888899
Q ss_pred HHHHhccCceEEEEeecCC
Q 017747 209 RSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~~ 227 (366)
-.+-|+|||++++..++..
T Consensus 145 ~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 145 VSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp HHHHEEEEEEEEEEESCCH
T ss_pred HHHhCcCCCEEEEEeCCCc
Confidence 9999999999999987654
No 107
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.14 E-value=4.9e-06 Score=75.13 Aligned_cols=70 Identities=13% Similarity=0.146 Sum_probs=43.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..+..+ .+. ..+|+..|+........-+.. .+-
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l--------~~~----------~~~v~~vD~s~~~~~~a~~~~---------------~~~ 93 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARF--------GPQ----------AARWAAYDFSPELLKLARANA---------------PHA 93 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHH--------GGG----------SSEEEEEESCHHHHHHHHHHC---------------TTS
T ss_pred CCCCeEEEeCCCCCHHHHHH--------HHc----------CCEEEEEECCHHHHHHHHHhC---------------CCc
Confidence 34689999999999988642 111 268899998653222222111 112
Q ss_pred eEEeccCCCccccc-CC-CCcccEEEcc
Q 017747 129 VYIAGYPGSFYGRL-FP-NNSLHFIHSS 154 (366)
Q Consensus 129 ~f~~~vpgSFy~~l-fp-~~s~~~~~S~ 154 (366)
.|+. +++.+.+ ++ ++++|+++|+
T Consensus 94 ~~~~---~d~~~~~~~~~~~~fD~v~~~ 118 (226)
T 3m33_A 94 DVYE---WNGKGELPAGLGAPFGLIVSR 118 (226)
T ss_dssp EEEE---CCSCSSCCTTCCCCEEEEEEE
T ss_pred eEEE---cchhhccCCcCCCCEEEEEeC
Confidence 3444 3554444 56 8899999987
No 108
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.13 E-value=6.3e-06 Score=72.43 Aligned_cols=56 Identities=9% Similarity=0.128 Sum_probs=37.4
Q ss_pred CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEE
Q 017747 143 FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLI 222 (366)
Q Consensus 143 fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~ 222 (366)
++++++|+++|..++||... ...+ .+ ...+....+|+.-.+-|+|||+|++.
T Consensus 102 ~~~~~fD~v~~~~~~~~~g~---~~~d-----------------------~~--~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCIGN---KIDD-----------------------HL--NSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp HTTCCEEEEEECCCCCCCSC---HHHH-----------------------HH--HHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcccEEEeCCCcCCCCC---cccC-----------------------HH--HHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 57789999999999998421 0001 00 01122345677778899999999997
Q ss_pred eecC
Q 017747 223 LLGR 226 (366)
Q Consensus 223 ~~g~ 226 (366)
++..
T Consensus 154 ~~~~ 157 (201)
T 2plw_A 154 MYLG 157 (201)
T ss_dssp EECS
T ss_pred EeCC
Confidence 7654
No 109
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.11 E-value=1e-05 Score=68.40 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=70.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+.+.. .|..+++..|+.. ... ++ +-.
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~---------------~~~~~v~~~D~~~-~~~-----~~---------------~~~ 65 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQI---------------GGKGRIIACDLLP-MDP-----IV---------------GVD 65 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHH---------------CTTCEEEEEESSC-CCC-----CT---------------TEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHh---------------CCCCeEEEEECcc-ccc-----cC---------------cEE
Confidence 45799999999999887532221 1236888888764 211 11 111
Q ss_pred EEeccCCCccccc--------CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL--------FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQED 201 (366)
Q Consensus 130 f~~~vpgSFy~~l--------fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 201 (366)
+.. +++.+-- ++++++|+++++..+||...... + . ......
T Consensus 66 ~~~---~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~---~--------------------~-----~~~~~~ 114 (180)
T 1ej0_A 66 FLQ---GDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAV---D--------------------I-----PRAMYL 114 (180)
T ss_dssp EEE---SCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHH---H--------------------H-----HHHHHH
T ss_pred EEE---cccccchhhhhhhccCCCCceeEEEECCCccccCCCcc---c--------------------h-----HHHHHH
Confidence 222 3443322 67889999999999999654111 1 0 001223
Q ss_pred HHHHHHHHHHHhccCceEEEEeecCC
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
...+|+.-.+-|+|||++++......
T Consensus 115 ~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 115 VELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred HHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 46778888899999999999876554
No 110
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.11 E-value=6.9e-06 Score=78.21 Aligned_cols=144 Identities=19% Similarity=0.174 Sum_probs=83.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||||..|..+ .+. +.-+|+.-|+..++.....+.-+ .+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L--------~~~---------ga~~V~aVDvs~~mL~~a~r~~~----------------rv 131 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVM--------LQN---------GAKLVYAVDVGTNQLVWKLRQDD----------------RV 131 (291)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHT---------TCSEEEEECSSSSCSCHHHHTCT----------------TE
T ss_pred cccEEEecCCCccHHHHHH--------HhC---------CCCEEEEEECCHHHHHHHHHhCc----------------cc
Confidence 4579999999999999642 221 12689999998876543222111 11
Q ss_pred EEeccCCCc--c-cccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSF--Y-GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 f~~~vpgSF--y-~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
-... ...+ . ..-+|..++|++.+..++|++..+ |
T Consensus 132 ~~~~-~~ni~~l~~~~l~~~~fD~v~~d~sf~sl~~v------------------------------------------L 168 (291)
T 3hp7_A 132 RSME-QYNFRYAEPVDFTEGLPSFASIDVSFISLNLI------------------------------------------L 168 (291)
T ss_dssp EEEC-SCCGGGCCGGGCTTCCCSEEEECCSSSCGGGT------------------------------------------H
T ss_pred ceec-ccCceecchhhCCCCCCCEEEEEeeHhhHHHH------------------------------------------H
Confidence 0000 0011 0 112466789999999999987332 2
Q ss_pred HHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhhcCce
Q 017747 207 RSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGREGSF 286 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~~gsf 286 (366)
..-++-|+|||++++.. ...- +.-...+. ..|.+.. ...+..+.+++.+.++..| |
T Consensus 169 ~e~~rvLkpGG~lv~lv-kPqf------------e~~~~~~~---~~G~vrd-------~~~~~~~~~~v~~~~~~~G-f 224 (291)
T 3hp7_A 169 PALAKILVDGGQVVALV-KPQF------------EAGREQIG---KNGIVRE-------SSIHEKVLETVTAFAVDYG-F 224 (291)
T ss_dssp HHHHHHSCTTCEEEEEE-CGGG------------TSCGGGCC----CCCCCC-------HHHHHHHHHHHHHHHHHTT-E
T ss_pred HHHHHHcCcCCEEEEEE-Cccc------------ccChhhcC---CCCccCC-------HHHHHHHHHHHHHHHHHCC-C
Confidence 33388999999999974 1111 10000000 0232211 1124457889999999999 9
Q ss_pred EEeeEEE
Q 017747 287 KLDQLDM 293 (366)
Q Consensus 287 ~i~~~e~ 293 (366)
++..+..
T Consensus 225 ~v~~~~~ 231 (291)
T 3hp7_A 225 SVKGLDF 231 (291)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8866554
No 111
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.10 E-value=5.9e-06 Score=74.47 Aligned_cols=106 Identities=19% Similarity=0.270 Sum_probs=67.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+..+ . .. .+++..|+.......+-+.+. . .+ ..--+
T Consensus 34 ~~~vLdiG~G~G~~~~~l--------~---------~~--~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~~~ 83 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLL--------A---------DH--YEVTGVDLSEEMLEIAQEKAM-------E-TN---RHVDF 83 (243)
T ss_dssp TCEEEEESCTTCHHHHHH--------T---------TT--SEEEEEESCHHHHHHHHHHHH-------H-TT---CCCEE
T ss_pred CCeEEEecCCCCHHHHHH--------h---------hC--CeEEEEECCHHHHHHHHHhhh-------h-cC---CceEE
Confidence 479999999999988642 1 11 678888886543322221111 1 11 11223
Q ss_pred EeccCCCcccccCCCCcccEEEccc-ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSN-SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~-alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
.. +++.+-.++ +++|++++.. ++||+.. ..|...+|+.-
T Consensus 84 ~~---~d~~~~~~~-~~fD~v~~~~~~~~~~~~------------------------------------~~~~~~~l~~~ 123 (243)
T 3d2l_A 84 WV---QDMRELELP-EPVDAITILCDSLNYLQT------------------------------------EADVKQTFDSA 123 (243)
T ss_dssp EE---CCGGGCCCS-SCEEEEEECTTGGGGCCS------------------------------------HHHHHHHHHHH
T ss_pred EE---cChhhcCCC-CCcCEEEEeCCchhhcCC------------------------------------HHHHHHHHHHH
Confidence 33 355433344 8999999987 9998642 13455677788
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||++++.+...
T Consensus 124 ~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 124 ARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp HHHEEEEEEEEEEEECH
T ss_pred HHhcCCCeEEEEEcCCH
Confidence 89999999999987543
No 112
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.06 E-value=6.9e-06 Score=80.97 Aligned_cols=108 Identities=17% Similarity=0.145 Sum_probs=70.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .++ ..+|+..|.........-+.+ .. .+ ...-
T Consensus 233 ~~~~VLDlGcG~G~~~~~l--------a~~----------g~~V~gvDis~~al~~A~~n~-------~~-~~---~~v~ 283 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPL--------ARM----------GAEVVGVEDDLASVLSLQKGL-------EA-NA---LKAQ 283 (381)
T ss_dssp TTCEEEEETCTTSTTHHHH--------HHT----------TCEEEEEESBHHHHHHHHHHH-------HH-TT---CCCE
T ss_pred CCCEEEEEeeeCCHHHHHH--------HHc----------CCEEEEEECCHHHHHHHHHHH-------HH-cC---CCeE
Confidence 4579999999999999753 221 168889998543222221111 11 11 1222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. +++.+-+.+++++|+++|+..+||...... .+...||+.-
T Consensus 284 ~~~---~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~----------------------------------~~~~~~l~~~ 326 (381)
T 3dmg_A 284 ALH---SDVDEALTEEARFDIIVTNPPFHVGGAVIL----------------------------------DVAQAFVNVA 326 (381)
T ss_dssp EEE---CSTTTTSCTTCCEEEEEECCCCCTTCSSCC----------------------------------HHHHHHHHHH
T ss_pred EEE---cchhhccccCCCeEEEEECCchhhcccccH----------------------------------HHHHHHHHHH
Confidence 333 466666667789999999999998443221 2455678888
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
.+-|+|||+++++.
T Consensus 327 ~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 327 AARLRPGGVFFLVS 340 (381)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHhcCcCcEEEEEE
Confidence 99999999999985
No 113
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.04 E-value=7.3e-06 Score=74.35 Aligned_cols=107 Identities=13% Similarity=0.129 Sum_probs=66.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+.. +.+ ..+ .+++..|+..+....+-+... .. ..++
T Consensus 60 ~~~~vLDiGcGtG~~~~~--------l~~--------~~~-~~v~gvD~s~~~l~~a~~~~~--------~~----~~~v 110 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASK--------VQE--------API-DEHWIIECNDGVFQRLRDWAP--------RQ----THKV 110 (236)
T ss_dssp TCEEEEEECCTTSHHHHH--------HHT--------SCE-EEEEEEECCHHHHHHHHHHGG--------GC----SSEE
T ss_pred CCCeEEEEeccCCHHHHH--------HHh--------cCC-CeEEEEcCCHHHHHHHHHHHH--------hc----CCCe
Confidence 468999999999998864 211 122 488999987643333322111 00 1122
Q ss_pred -EEeccCCCcccc--cCCCCcccEEEc-ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGR--LFPNNSLHFIHS-SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 -f~~~vpgSFy~~--lfp~~s~~~~~S-~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++. +++.+. -+|++++|++++ .+++++ .... ..++..+
T Consensus 111 ~~~~---~d~~~~~~~~~~~~fD~V~~d~~~~~~-~~~~----------------------------------~~~~~~~ 152 (236)
T 1zx0_A 111 IPLK---GLWEDVAPTLPDGHFDGILYDTYPLSE-ETWH----------------------------------THQFNFI 152 (236)
T ss_dssp EEEE---SCHHHHGGGSCTTCEEEEEECCCCCBG-GGTT----------------------------------THHHHHH
T ss_pred EEEe---cCHHHhhcccCCCceEEEEECCcccch-hhhh----------------------------------hhhHHHH
Confidence 333 466544 478899999999 666522 2211 1234557
Q ss_pred HHHHHHHhccCceEEEEe
Q 017747 206 LRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~ 223 (366)
|+.-.+-|+|||+|++..
T Consensus 153 l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 153 KNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHTHHHHEEEEEEEEECC
T ss_pred HHHHHHhcCCCeEEEEEe
Confidence 778889999999998764
No 114
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.03 E-value=1.2e-05 Score=69.86 Aligned_cols=115 Identities=13% Similarity=0.157 Sum_probs=63.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..|+.+ .+ . ..+|+..|+.......+-+.+. . .+ ..+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l--------a~---------~-~~~v~~vD~s~~~l~~a~~~~~-------~-~~---~~~ 71 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFL--------AG---------L-SKKVYAFDVQEQALGKTSQRLS-------D-LG---IEN 71 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHH--------HT---------T-SSEEEEEESCHHHHHHHHHHHH-------H-HT---CCC
T ss_pred CCCCEEEEEcCCCCHHHHHH--------HH---------h-CCEEEEEECCHHHHHHHHHHHH-------H-cC---CCc
Confidence 34579999999999999752 11 1 3789999986543332222111 1 11 123
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ |+. +++..-. ++++++|+++++ ++|+......+.. ...+...+|
T Consensus 72 v~~~~---~~~~~l~~~~~~~fD~v~~~--~~~~~~~~~~~~~----------------------------~~~~~~~~l 118 (185)
T 3mti_A 72 TELIL---DGHENLDHYVREPIRAAIFN--LGYLPSADKSVIT----------------------------KPHTTLEAI 118 (185)
T ss_dssp EEEEE---SCGGGGGGTCCSCEEEEEEE--EC---------------------------------------CHHHHHHHH
T ss_pred EEEEe---CcHHHHHhhccCCcCEEEEe--CCCCCCcchhccc----------------------------ChhhHHHHH
Confidence 3 333 3442211 568899999876 3454321111100 013344567
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-.+-|+|||++++....
T Consensus 119 ~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 119 EKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp HHHHHHEEEEEEEEEEEC-
T ss_pred HHHHHhcCCCcEEEEEEeC
Confidence 7778999999999998753
No 115
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.03 E-value=5.3e-06 Score=73.53 Aligned_cols=99 Identities=14% Similarity=0.064 Sum_probs=65.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. ..+|+..|........+-+.+. ..+ ..++
T Consensus 77 ~~~~vLdiG~G~G~~~~~l--------a~~----------~~~v~~vD~~~~~~~~a~~~~~--------~~~---~~~v 127 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAIL--------AHL----------VQHVCSVERIKGLQWQARRRLK--------NLD---LHNV 127 (210)
T ss_dssp TTCEEEEECCTTSHHHHHH--------HHH----------SSEEEEEESCHHHHHHHHHHHH--------HTT---CCSE
T ss_pred CCCEEEEEcCCCCHHHHHH--------HHh----------CCEEEEEecCHHHHHHHHHHHH--------HcC---CCce
Confidence 4689999999999998753 221 1678888886432222221111 111 1232
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+.. ++..+.+.+.+++|+++++.++||+.+ . +
T Consensus 128 ~~~~---~d~~~~~~~~~~~D~i~~~~~~~~~~~---~-----------------------~------------------ 160 (210)
T 3lbf_A 128 STRH---GDGWQGWQARAPFDAIIVTAAPPEIPT---A-----------------------L------------------ 160 (210)
T ss_dssp EEEE---SCGGGCCGGGCCEEEEEESSBCSSCCT---H-----------------------H------------------
T ss_pred EEEE---CCcccCCccCCCccEEEEccchhhhhH---H-----------------------H------------------
Confidence 333 566666667789999999999988532 1 1
Q ss_pred HHHHhccCceEEEEeec
Q 017747 209 RSEELVVGGRMVLILLG 225 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g 225 (366)
.+-|+|||+|++.+..
T Consensus 161 -~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 161 -MTQLDEGGILVLPVGE 176 (210)
T ss_dssp -HHTEEEEEEEEEEECS
T ss_pred -HHhcccCcEEEEEEcC
Confidence 6789999999999876
No 116
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.02 E-value=3.3e-05 Score=76.66 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=75.6
Q ss_pred CCceEEEeecCC------CCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcC
Q 017747 49 PKTINIADLGCS------SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERG 122 (366)
Q Consensus 49 ~~~~~IaDlGCs------~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~ 122 (366)
.++.+|+|+||| +|..|+.++... .|..+|+..|+..+.. + ..
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~---------------fP~a~V~GVDiSp~m~---~--~~----------- 263 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSF---------------FPRGQIYGLDIMDKSH---V--DE----------- 263 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHH---------------CTTCEEEEEESSCCGG---G--CB-----------
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHh---------------CCCCEEEEEECCHHHh---h--cC-----------
Confidence 457899999999 788887532221 2448999999977641 0 00
Q ss_pred CCCCCceEEeccCCCcccccCC------CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHH
Q 017747 123 GGSSPSVYIAGYPGSFYGRLFP------NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFK 196 (366)
Q Consensus 123 ~~~~~~~f~~~vpgSFy~~lfp------~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~ 196 (366)
.+-.|+.+ +..+--|+ ++++|+++|..+ ||..
T Consensus 264 ---~rI~fv~G---Da~dlpf~~~l~~~d~sFDlVisdgs-H~~~----------------------------------- 301 (419)
T 3sso_A 264 ---LRIRTIQG---DQNDAEFLDRIARRYGPFDIVIDDGS-HINA----------------------------------- 301 (419)
T ss_dssp ---TTEEEEEC---CTTCHHHHHHHHHHHCCEEEEEECSC-CCHH-----------------------------------
T ss_pred ---CCcEEEEe---cccccchhhhhhcccCCccEEEECCc-ccch-----------------------------------
Confidence 11234443 44333344 689999999754 5421
Q ss_pred HHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCC------CCchhHHHHHHHHHHHH
Q 017747 197 QFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVD------RGNSFFWELLSRSLAIL 250 (366)
Q Consensus 197 Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~------~~~~~~~~~l~~al~~m 250 (366)
|+..+|+.-.+-|||||++++.-+-..-..... .....+.+.++..+..+
T Consensus 302 ----d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l 357 (419)
T 3sso_A 302 ----HVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAI 357 (419)
T ss_dssp ----HHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHh
Confidence 234456777899999999999855422111110 11123566677666665
No 117
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.02 E-value=1.4e-05 Score=70.69 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=63.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+. .|..+++..|........+-+.+. . .+ ..++
T Consensus 40 ~~~~vLDiG~G~G~~~~~--------la~~--------~~~~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~~v 92 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIE--------ASNL--------MPNGRIFALERNPQYLGFIRDNLK-------K-FV---ARNV 92 (204)
T ss_dssp TTCEEEEETCTTCHHHHH--------HHHH--------CTTSEEEEEECCHHHHHHHHHHHH-------H-HT---CTTE
T ss_pred CCCEEEEECCCCCHHHHH--------HHHH--------CCCCEEEEEeCCHHHHHHHHHHHH-------H-hC---CCcE
Confidence 457999999999999875 3332 234789999986543322222111 1 11 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
++. +++.+.+.+.+++|++++..+++ +...+|+.
T Consensus 93 ~~~~---~d~~~~~~~~~~~D~i~~~~~~~------------------------------------------~~~~~l~~ 127 (204)
T 3e05_A 93 TLVE---AFAPEGLDDLPDPDRVFIGGSGG------------------------------------------MLEEIIDA 127 (204)
T ss_dssp EEEE---CCTTTTCTTSCCCSEEEESCCTT------------------------------------------CHHHHHHH
T ss_pred EEEe---CChhhhhhcCCCCCEEEECCCCc------------------------------------------CHHHHHHH
Confidence 222 45555554457899998876553 12245666
Q ss_pred HHHHhccCceEEEEee
Q 017747 209 RSEELVVGGRMVLILL 224 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~ 224 (366)
-.+-|+|||++++...
T Consensus 128 ~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 128 VDRRLKSEGVIVLNAV 143 (204)
T ss_dssp HHHHCCTTCEEEEEEC
T ss_pred HHHhcCCCeEEEEEec
Confidence 7889999999999763
No 118
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.00 E-value=9.9e-06 Score=69.41 Aligned_cols=104 Identities=16% Similarity=0.189 Sum_probs=64.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+ ..|..+++..|+.......+-+.+. ..+. ..++
T Consensus 25 ~~~~vldiG~G~G~~~~~l--------~~--------~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~--~~~~ 78 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEW--------LR--------STPQTTAVCFEISEERRERILSNAI--------NLGV--SDRI 78 (178)
T ss_dssp TTEEEEEESTTTTHHHHHH--------HT--------TSSSEEEEEECSCHHHHHHHHHHHH--------TTTC--TTSE
T ss_pred CCCeEEEeCCCCCHHHHHH--------HH--------HCCCCeEEEEeCCHHHHHHHHHHHH--------HhCC--CCCE
Confidence 4579999999999988742 12 1245889999986543322221111 1111 1145
Q ss_pred EEeccCCCcccccCCC--CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPN--NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~--~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
++. ++..+ .+|. +++|+++++.++|| +. +|+
T Consensus 79 ~~~---~d~~~-~~~~~~~~~D~i~~~~~~~~----~~---------------------------------------~l~ 111 (178)
T 3hm2_A 79 AVQ---QGAPR-AFDDVPDNPDVIFIGGGLTA----PG---------------------------------------VFA 111 (178)
T ss_dssp EEE---CCTTG-GGGGCCSCCSEEEECC-TTC----TT---------------------------------------HHH
T ss_pred EEe---cchHh-hhhccCCCCCEEEECCcccH----HH---------------------------------------HHH
Confidence 444 34433 3444 89999999999988 21 134
Q ss_pred HHHHHhccCceEEEEeecC
Q 017747 208 SRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~ 226 (366)
.-.+-|+|||++++..+..
T Consensus 112 ~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 112 AAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp HHHHTCCTTCEEEEEECSH
T ss_pred HHHHhcCCCCEEEEEeecc
Confidence 4478899999999987544
No 119
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.97 E-value=1.5e-05 Score=72.60 Aligned_cols=71 Identities=15% Similarity=0.115 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHh
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~ 281 (366)
...+|+.-++-|||||+|++........ +.....++.+ ....|.|++. +|+.+.++
T Consensus 118 ~~~~l~~~~r~LkpGG~l~i~~~~~~~~-----------~~~~~~~~~~------------~~~~~~~~~~-~el~~~l~ 173 (225)
T 3p2e_A 118 NRDILSNVADLAKKEAHFEFVTTYSDSY-----------EEAEIKKRGL------------PLLSKAYFLS-EQYKAELS 173 (225)
T ss_dssp CHHHHHHHHTTEEEEEEEEEEECCCC-------------------------------------CCHHHHHS-HHHHHHHH
T ss_pred hHHHHHHHHHhcCCCcEEEEEEeccccc-----------hhchhhhcCC------------CCCChhhcch-HHHHHHHH
Confidence 3456777789999999999954322211 1111001100 0112333332 46999999
Q ss_pred hcCceEEeeEEEEeec
Q 017747 282 REGSFKLDQLDMFQVE 297 (366)
Q Consensus 282 ~~gsf~i~~~e~~~~~ 297 (366)
+.| |++...+.+...
T Consensus 174 ~aG-f~v~~~~~~~~~ 188 (225)
T 3p2e_A 174 NSG-FRIDDVKELDNE 188 (225)
T ss_dssp HHT-CEEEEEEEECHH
T ss_pred HcC-CCeeeeeecCHH
Confidence 999 999888887643
No 120
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.97 E-value=1.2e-05 Score=72.38 Aligned_cols=112 Identities=13% Similarity=0.199 Sum_probs=67.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++. +.+. .|..+++..|+.......+-+.+ . ..+ ..++
T Consensus 39 ~~~vLDiGcG~G~~~~~--------la~~--------~p~~~v~giD~s~~~l~~a~~~~-------~-~~~---~~nv~ 91 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISG--------MAKQ--------NPDINYIGIELFKSVIVTAVQKV-------K-DSE---AQNVK 91 (213)
T ss_dssp CCEEEEECCTTSHHHHH--------HHHH--------CTTSEEEEECSCHHHHHHHHHHH-------H-HSC---CSSEE
T ss_pred CceEEEEecCCCHHHHH--------HHHH--------CCCCCEEEEEechHHHHHHHHHH-------H-HcC---CCCEE
Confidence 46899999999999875 3332 34588999998754332222111 1 111 2233
Q ss_pred EEeccCCCccc--ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYG--RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~--~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
|+. ++..+ ..+|++++|.++++...+|...... +.++ ....||+
T Consensus 92 ~~~---~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~~rl--------------------~~~~~l~ 137 (213)
T 2fca_A 92 LLN---IDADTLTDVFEPGEVKRVYLNFSDPWPKKRHE-----------KRRL--------------------TYSHFLK 137 (213)
T ss_dssp EEC---CCGGGHHHHCCTTSCCEEEEESCCCCCSGGGG-----------GGST--------------------TSHHHHH
T ss_pred EEe---CCHHHHHhhcCcCCcCEEEEECCCCCcCcccc-----------cccc--------------------CcHHHHH
Confidence 333 34433 3488999999998877777432100 0000 0134567
Q ss_pred HHHHHhccCceEEEEe
Q 017747 208 SRSEELVVGGRMVLIL 223 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~ 223 (366)
.-++-|+|||++++..
T Consensus 138 ~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 138 KYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHHHHHTTSCEEEEEE
T ss_pred HHHHHcCCCCEEEEEe
Confidence 7789999999999986
No 121
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.95 E-value=3e-05 Score=67.87 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=68.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+...+ .|..+++..|+.......+-+.+. . .+. ..++
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~---------------~~~~~v~~vD~s~~~~~~a~~~~~-------~-~~~--~~~v 76 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLV---------------GENGRVFGFDIQDKAIANTTKKLT-------D-LNL--IDRV 76 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHH---------------CTTCEEEEECSCHHHHHHHHHHHH-------H-TTC--GGGE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHh---------------CCCCEEEEEECCHHHHHHHHHHHH-------H-cCC--CCCe
Confidence 35799999999999887533222 123589999986543333222211 1 111 0122
Q ss_pred -EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 -f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
++. +++.+-. ++++++|+++++..+ +|..-. .+. .. .+|...+|+
T Consensus 77 ~~~~---~d~~~~~~~~~~~fD~v~~~~~~-----~~~~~~----------~~~----~~-----------~~~~~~~l~ 123 (197)
T 3eey_A 77 TLIK---DGHQNMDKYIDCPVKAVMFNLGY-----LPSGDH----------SIS----TR-----------PETTIQALS 123 (197)
T ss_dssp EEEC---SCGGGGGGTCCSCEEEEEEEESB-----CTTSCT----------TCB----CC-----------HHHHHHHHH
T ss_pred EEEE---CCHHHHhhhccCCceEEEEcCCc-----ccCccc----------ccc----cC-----------cccHHHHHH
Confidence 333 4553333 667899999988665 221100 000 00 124455788
Q ss_pred HHHHHhccCceEEEEeec
Q 017747 208 SRSEELVVGGRMVLILLG 225 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g 225 (366)
.-.+-|+|||++++....
T Consensus 124 ~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 124 KAMELLVTGGIITVVIYY 141 (197)
T ss_dssp HHHHHEEEEEEEEEEECC
T ss_pred HHHHhCcCCCEEEEEEcc
Confidence 888999999999998653
No 122
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.94 E-value=6.9e-06 Score=70.93 Aligned_cols=107 Identities=14% Similarity=0.185 Sum_probs=68.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
...+|+|+|||+|..+..+ .+ . ..+++..|+.......+-+.+. . .+ ..+
T Consensus 52 ~~~~vLdiG~G~G~~~~~~--------~~--------~--~~~v~~~D~~~~~~~~a~~~~~-------~-~~---~~~~ 102 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIAL--------AD--------E--VKSTTMADINRRAIKLAKENIK-------L-NN---LDNY 102 (194)
T ss_dssp TTCEEEEETCTTSHHHHHH--------GG--------G--SSEEEEEESCHHHHHHHHHHHH-------H-TT---CTTS
T ss_pred CCCeEEEeCCCCCHHHHHH--------HH--------c--CCeEEEEECCHHHHHHHHHHHH-------H-cC---CCcc
Confidence 4579999999999988642 11 1 2688999986533222221111 1 11 111
Q ss_pred -e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 -V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 -~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ +.. +++.+ .++++++|+++++..+||- ..+...+|
T Consensus 103 ~~~~~~---~d~~~-~~~~~~~D~v~~~~~~~~~--------------------------------------~~~~~~~l 140 (194)
T 1dus_A 103 DIRVVH---SDLYE-NVKDRKYNKIITNPPIRAG--------------------------------------KEVLHRII 140 (194)
T ss_dssp CEEEEE---CSTTT-TCTTSCEEEEEECCCSTTC--------------------------------------HHHHHHHH
T ss_pred ceEEEE---Cchhc-ccccCCceEEEECCCcccc--------------------------------------hhHHHHHH
Confidence 2 333 35544 5567899999998877761 12455677
Q ss_pred HHHHHHhccCceEEEEeecCC
Q 017747 207 RSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
+.-.+-|+|||++++......
T Consensus 141 ~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 141 EEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp HHHHHHEEEEEEEEEEEESTH
T ss_pred HHHHHHcCCCCEEEEEECCCC
Confidence 788999999999999987653
No 123
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.92 E-value=1.6e-05 Score=77.05 Aligned_cols=106 Identities=14% Similarity=0.040 Sum_probs=66.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+ .+. +..+|+..|+. .....+-+.+ ...+.. ..--
T Consensus 66 ~~~~VLDvGcG~G~~~~~l--------a~~---------g~~~v~gvD~s-~~l~~a~~~~--------~~~~~~-~~v~ 118 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFA--------AKA---------GARKVIGIECS-SISDYAVKIV--------KANKLD-HVVT 118 (349)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHT---------TCSEEEEEECS-THHHHHHHHH--------HHTTCT-TTEE
T ss_pred CCCEEEEEeccchHHHHHH--------HHC---------CCCEEEEECcH-HHHHHHHHHH--------HHcCCC-CcEE
Confidence 3579999999999988752 221 22689999987 3222221111 111211 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. ++..+-.+|++++|+++|....+++...+ ++..+|..+
T Consensus 119 ~~~---~d~~~~~~~~~~fD~Iis~~~~~~l~~~~------------------------------------~~~~~l~~~ 159 (349)
T 3q7e_A 119 IIK---GKVEEVELPVEKVDIIISEWMGYCLFYES------------------------------------MLNTVLHAR 159 (349)
T ss_dssp EEE---SCTTTCCCSSSCEEEEEECCCBBTBTBTC------------------------------------CHHHHHHHH
T ss_pred EEE---CcHHHccCCCCceEEEEEccccccccCch------------------------------------hHHHHHHHH
Confidence 344 46655458889999999987666653321 234567888
Q ss_pred HHHhccCceEEE
Q 017747 210 SEELVVGGRMVL 221 (366)
Q Consensus 210 a~EL~~GG~lvl 221 (366)
.+-|+|||+|+.
T Consensus 160 ~r~LkpgG~li~ 171 (349)
T 3q7e_A 160 DKWLAPDGLIFP 171 (349)
T ss_dssp HHHEEEEEEEES
T ss_pred HHhCCCCCEEcc
Confidence 999999999973
No 124
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.91 E-value=1.2e-05 Score=78.91 Aligned_cols=108 Identities=16% Similarity=0.073 Sum_probs=67.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
.+..+|+|+|||+|..++.+ .+. | . .+|+..|+. +....+-+.+. ..+.. ..-
T Consensus 62 ~~~~~VLDlGcGtG~ls~~l--------a~~-----g---~-~~V~gvD~s-~~~~~a~~~~~--------~~~~~-~~v 114 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWS--------AQA-----G---A-RKVYAVEAT-KMADHARALVK--------ANNLD-HIV 114 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHH--------HHT-----T---C-SEEEEEESS-TTHHHHHHHHH--------HTTCT-TTE
T ss_pred CCCCEEEEeccCcCHHHHHH--------Hhc-----C---C-CEEEEEccH-HHHHHHHHHHH--------HcCCC-CeE
Confidence 34689999999999988752 221 1 1 489999987 54433322211 11211 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
.++. ++..+-.+| +++|+++|....|++... .++..+|+.
T Consensus 115 ~~~~---~d~~~~~~~-~~~D~Iv~~~~~~~l~~e------------------------------------~~~~~~l~~ 154 (376)
T 3r0q_C 115 EVIE---GSVEDISLP-EKVDVIISEWMGYFLLRE------------------------------------SMFDSVISA 154 (376)
T ss_dssp EEEE---SCGGGCCCS-SCEEEEEECCCBTTBTTT------------------------------------CTHHHHHHH
T ss_pred EEEE---CchhhcCcC-CcceEEEEcChhhcccch------------------------------------HHHHHHHHH
Confidence 2444 455443455 899999997766776431 134566888
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
+.+-|+|||+|++.-
T Consensus 155 ~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 155 RDRWLKPTGVMYPSH 169 (376)
T ss_dssp HHHHEEEEEEEESSE
T ss_pred HHhhCCCCeEEEEec
Confidence 899999999998753
No 125
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.91 E-value=1.7e-05 Score=74.83 Aligned_cols=124 Identities=13% Similarity=0.155 Sum_probs=67.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchh------HHHHhhhc--
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDF------HRQLRNER-- 121 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~------~~~~~~~~-- 121 (366)
.+.+|+|+|||||..+..+.- .+.+.. +......+|+..|+..+.-...-+..... ...+....
T Consensus 105 ~~~rIld~GCgTGee~ysiAi----~L~e~~----~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~ 176 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAI----TLADAL----GMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFM 176 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHH----HHHHHH----CSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEE
T ss_pred CCcEEEEeeccCChhHHHHHH----HHHHhc----ccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhh
Confidence 468999999999985421100 122221 11111379999999876555544432110 00000000
Q ss_pred -CCCC-C-----------CceEEeccCCCcccccCC-CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCC
Q 017747 122 -GGGS-S-----------PSVYIAGYPGSFYGRLFP-NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSP 187 (366)
Q Consensus 122 -~~~~-~-----------~~~f~~~vpgSFy~~lfp-~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~ 187 (366)
+.+. . .-.|.. ++..+.-+| .+++|+++|.+.++|++. +
T Consensus 177 ~~~~~~~~~~~v~~~lr~~V~F~~---~dl~~~~~~~~~~fDlI~crnvliyf~~-~----------------------- 229 (274)
T 1af7_A 177 RGTGPHEGLVRVRQELANYVEFSS---VNLLEKQYNVPGPFDAIFCRNVMIYFDK-T----------------------- 229 (274)
T ss_dssp ECCTTSCSEEEECHHHHTTEEEEE---CCTTCSSCCCCCCEEEEEECSSGGGSCH-H-----------------------
T ss_pred ccccCCCCceeechhhcccCeEEe---cccCCCCCCcCCCeeEEEECCchHhCCH-H-----------------------
Confidence 0000 0 011222 233332244 578999999999999743 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEE
Q 017747 188 SAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVL 221 (366)
Q Consensus 188 ~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl 221 (366)
+....|+.-++-|+|||.|++
T Consensus 230 -------------~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 230 -------------TQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp -------------HHHHHHHHHGGGEEEEEEEEE
T ss_pred -------------HHHHHHHHHHHHhCCCcEEEE
Confidence 123445667899999999987
No 126
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.89 E-value=1.5e-05 Score=73.72 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=60.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+. | .+|+..|+........-+... . ++ ..--
T Consensus 120 ~~~~VLDiGcG~G~l~~~--------la~~-----g-----~~v~gvDi~~~~v~~a~~n~~-------~-~~---~~v~ 170 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIA--------AEKL-----G-----GKALGVDIDPMVLPQAEANAK-------R-NG---VRPR 170 (254)
T ss_dssp TTCEEEEETCTTSHHHHH--------HHHT-----T-----CEEEEEESCGGGHHHHHHHHH-------H-TT---CCCE
T ss_pred CCCEEEEecCCCcHHHHH--------HHHh-----C-----CeEEEEECCHHHHHHHHHHHH-------H-cC---CcEE
Confidence 457999999999998864 2221 1 288999986543332222111 1 11 1111
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
+. .+++.+ .+|++++|+++++...|++ ..++..-
T Consensus 171 ~~---~~d~~~-~~~~~~fD~Vv~n~~~~~~------------------------------------------~~~l~~~ 204 (254)
T 2nxc_A 171 FL---EGSLEA-ALPFGPFDLLVANLYAELH------------------------------------------AALAPRY 204 (254)
T ss_dssp EE---ESCHHH-HGGGCCEEEEEEECCHHHH------------------------------------------HHHHHHH
T ss_pred EE---ECChhh-cCcCCCCCEEEECCcHHHH------------------------------------------HHHHHHH
Confidence 22 245543 3577899999987544432 2345556
Q ss_pred HHHhccCceEEEEee
Q 017747 210 SEELVVGGRMVLILL 224 (366)
Q Consensus 210 a~EL~~GG~lvl~~~ 224 (366)
.+-|+|||+++++..
T Consensus 205 ~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 205 REALVPGGRALLTGI 219 (254)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHcCCCCEEEEEee
Confidence 788999999999753
No 127
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.88 E-value=1.7e-05 Score=73.15 Aligned_cols=98 Identities=19% Similarity=0.242 Sum_probs=61.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. .|..+++..|+..+.....-+.. ..-.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l--------~~~--------~~~~~v~~vD~s~~~~~~a~~~~---------------~~~~ 133 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAF--------ADA--------LPEITTFGLDVSKVAIKAAAKRY---------------PQVT 133 (269)
T ss_dssp TCCEEEEETCTTSTTHHHH--------HHT--------CTTSEEEEEESCHHHHHHHHHHC---------------TTSE
T ss_pred CCCEEEEECCCCCHHHHHH--------HHh--------CCCCeEEEEeCCHHHHHHHHHhC---------------CCcE
Confidence 4679999999999998742 221 12368899998653222221111 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++..-.++++++|+++++.+ |.. |+.-
T Consensus 134 ~~~---~d~~~~~~~~~~fD~v~~~~~-------~~~---------------------------------------l~~~ 164 (269)
T 1p91_A 134 FCV---ASSHRLPFSDTSMDAIIRIYA-------PCK---------------------------------------AEEL 164 (269)
T ss_dssp EEE---CCTTSCSBCTTCEEEEEEESC-------CCC---------------------------------------HHHH
T ss_pred EEE---cchhhCCCCCCceeEEEEeCC-------hhh---------------------------------------HHHH
Confidence 333 355443478899999998644 221 2233
Q ss_pred HHHhccCceEEEEeecCC
Q 017747 210 SEELVVGGRMVLILLGRI 227 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~ 227 (366)
.+-|+|||++++...+.+
T Consensus 165 ~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 165 ARVVKPGGWVITATPGPR 182 (269)
T ss_dssp HHHEEEEEEEEEEEECTT
T ss_pred HHhcCCCcEEEEEEcCHH
Confidence 788999999999987764
No 128
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.88 E-value=3.3e-05 Score=70.83 Aligned_cols=122 Identities=17% Similarity=0.174 Sum_probs=66.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++. +.+ ..|...++..|+.......+-+.+.. +......+ ..++
T Consensus 46 ~~~~vLDiGcG~G~~~~~--------la~--------~~p~~~v~GiDis~~~l~~A~~~~~~----l~~~~~~~-~~nv 104 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVE--------LSP--------LFPDTLILGLEIRVKVSDYVQDRIRA----LRAAPAGG-FQNI 104 (235)
T ss_dssp CCEEEEEETCTTCHHHHH--------HGG--------GSTTSEEEEEESCHHHHHHHHHHHHH----HHHSTTCC-CTTE
T ss_pred CCCeEEEEccCCcHHHHH--------HHH--------HCCCCeEEEEECCHHHHHHHHHHHHH----HHHHHhcC-CCeE
Confidence 457899999999999874 222 23558899999875433322211110 00000001 2233
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+.+-...+....|+++++|.++..+.-.|..+... |.++ ....||+.
T Consensus 105 ~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~-----------krr~--------------------~~~~~l~~ 153 (235)
T 3ckk_A 105 ACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKH-----------KWRI--------------------ISPTLLAE 153 (235)
T ss_dssp EEEECCTTTCHHHHCCTTCEEEEEEESCC----------------------C--------------------CCHHHHHH
T ss_pred EEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhh-----------hhhh--------------------hhHHHHHH
Confidence 444322222234478999999998776666322100 0000 01346777
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-++-|+|||+|++..
T Consensus 154 ~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 154 YAYVLRVGGLVYTIT 168 (235)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHCCCCCEEEEEe
Confidence 789999999999986
No 129
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.87 E-value=4.9e-05 Score=66.22 Aligned_cols=118 Identities=13% Similarity=0.110 Sum_probs=67.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhh-hcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREI-LQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~-~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
...+|+|+|||+|..++.+ .+++... .....+..+|+..|+.... .++ .-
T Consensus 22 ~~~~vLDlGcG~G~~~~~l--------a~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~---------------~~ 72 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVA--------VQKVNAAGTDPSSPVGFVLGVDLLHIF------PLE---------------GA 72 (196)
T ss_dssp TTCEEEEETCCSCHHHHHH--------HHHTTTTCCCTTSCCCEEEEECSSCCC------CCT---------------TC
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHHhccccccccCCCceEEEEechhcc------cCC---------------CC
Confidence 4579999999999998753 2321100 0001223689999986521 010 01
Q ss_pred eEEeccCCCccc--------ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYG--------RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQE 200 (366)
Q Consensus 129 ~f~~~vpgSFy~--------~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~ 200 (366)
.++ ..+++.. ..++++++|+++|..++||.-. ...+ . .....
T Consensus 73 ~~~--~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~---~~~~-----------------------~--~~~~~ 122 (196)
T 2nyu_A 73 TFL--CPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGF---RDLD-----------------------H--DRLIS 122 (196)
T ss_dssp EEE--CSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSC---HHHH-----------------------H--HHHHH
T ss_pred eEE--EeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCC---cccC-----------------------H--HHHHH
Confidence 122 0233322 1256779999999877766321 0001 0 01123
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecC
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
....+|+.-.+-|+|||+|++..+..
T Consensus 123 ~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 123 LCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 34567778889999999999987543
No 130
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.86 E-value=2.4e-05 Score=69.49 Aligned_cols=83 Identities=11% Similarity=0.016 Sum_probs=48.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +.. .|..+++..|...+.....-+.+. ..+ ..++
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~--------~~~-------~~~~~v~~vD~~~~~~~~a~~~~~--------~~~---~~~v 130 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTA--------EIV-------GEDGLVVSIERIPELAEKAERTLR--------KLG---YDNV 130 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH-------CTTSEEEEEESCHHHHHHHHHHHH--------HHT---CTTE
T ss_pred CCCEEEEECCCccHHHHHHH--------HHh-------CCCCEEEEEeCCHHHHHHHHHHHH--------HcC---CCCe
Confidence 45799999999999987532 221 133688888976532222211111 111 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEccccccccc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLS 161 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls 161 (366)
+.. +++...+.+++++|+++++.++|++.
T Consensus 131 ~~~~---~d~~~~~~~~~~fD~v~~~~~~~~~~ 160 (215)
T 2yxe_A 131 IVIV---GDGTLGYEPLAPYDRIYTTAAGPKIP 160 (215)
T ss_dssp EEEE---SCGGGCCGGGCCEEEEEESSBBSSCC
T ss_pred EEEE---CCcccCCCCCCCeeEEEECCchHHHH
Confidence 333 35533333377899999999999753
No 131
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.85 E-value=1.3e-05 Score=70.52 Aligned_cols=133 Identities=13% Similarity=0.095 Sum_probs=63.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|..++.+ .+. .|..+++..|+.......+-+.+... +
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l--------~~~--------~~~~~v~~vD~~~~~~~~a~~~~~~~-------------~- 78 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSI--------ALA--------CPGVSVTAVDLSMDALAVARRNAERF-------------G- 78 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHH--------HHH--------CTTEEEEEEECC-----------------------------
T ss_pred CCCCEEEEecCCHhHHHHHH--------HHh--------CCCCeEEEEECCHHHHHHHHHHHHHh-------------C-
Confidence 45689999999999988753 232 23478999999664433332222110 0
Q ss_pred eEEeccCCCcccccCCC-----CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPN-----NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFT 203 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~-----~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~ 203 (366)
.-+..+.+++.+ .+++ +++|+++++-.+++.........+.. .+... ..... .......+.
T Consensus 79 ~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~--~~~~~-~~~~~----------~~~~~~~~~ 144 (215)
T 4dzr_A 79 AVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVR--DYEPR-LALDG----------GEDGLQFYR 144 (215)
T ss_dssp ----CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC-------------------------------------CTTHHHH
T ss_pred CceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhh--ccCcc-ccccC----------CCcHHHHHH
Confidence 011223345555 5555 89999999877666443221100000 00000 00000 000123346
Q ss_pred HHHHHHHHHhccCceEEEEeec
Q 017747 204 LFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
.||+.-.+-|+|||++++...+
T Consensus 145 ~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 145 RMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHTCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHHHHhcCCCeEEEEEEC
Confidence 7888889999999995444443
No 132
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.84 E-value=6.3e-06 Score=75.95 Aligned_cols=63 Identities=13% Similarity=0.075 Sum_probs=41.9
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEec
Q 017747 17 SYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLN 96 (366)
Q Consensus 17 sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~n 96 (366)
.|+.....|.+....++..|+. + ......+|+|+|||+|..|..+...+ .|.-+|+..
T Consensus 50 ~yr~w~~~~skla~~ll~~l~~----~---~l~~g~~VLDlG~GtG~~t~~la~~v---------------~~~G~V~av 107 (232)
T 3id6_C 50 EYREWNAFRSKLAGAILKGLKT----N---PIRKGTKVLYLGAASGTTISHVSDII---------------ELNGKAYGV 107 (232)
T ss_dssp EEEECCTTTCHHHHHHHTTCSC----C---SCCTTCEEEEETCTTSHHHHHHHHHH---------------TTTSEEEEE
T ss_pred chhhhchHHHHHHHHHHhhhhh----c---CCCCCCEEEEEeecCCHHHHHHHHHh---------------CCCCEEEEE
Confidence 4777788888887665543321 1 11235899999999999887533222 234689999
Q ss_pred CCCCC
Q 017747 97 DLPTN 101 (366)
Q Consensus 97 DLp~N 101 (366)
|+...
T Consensus 108 D~s~~ 112 (232)
T 3id6_C 108 EFSPR 112 (232)
T ss_dssp ECCHH
T ss_pred ECcHH
Confidence 98654
No 133
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.84 E-value=9.4e-05 Score=68.79 Aligned_cols=125 Identities=15% Similarity=0.184 Sum_probs=71.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. .|..+++..|........+-+.. . ..+ ..++
T Consensus 109 ~~~~vLDlG~GsG~~~~~l--------a~~--------~~~~~v~~vD~s~~~l~~a~~n~-------~-~~~---~~~v 161 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALAL--------ASE--------RPDCEIIAVDRMPDAVSLAQRNA-------Q-HLA---IKNI 161 (276)
T ss_dssp SCCEEEEETCTTSHHHHHH--------HHH--------CTTSEEEEECSSHHHHHHHHHHH-------H-HHT---CCSE
T ss_pred CCCEEEEecCCccHHHHHH--------HHh--------CCCCEEEEEECCHHHHHHHHHHH-------H-HcC---CCce
Confidence 3579999999999988753 222 23478999998653222221111 1 111 1222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCC---cccc-cccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPP---TLYN-EMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~---~~~~-~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
- .+.+++.+ .+|++++|+++|+-..+|... +. .+.. +...++..| ...-.++..+
T Consensus 162 ~--~~~~d~~~-~~~~~~fD~Iv~npPy~~~~~-~~l~~~v~~~~p~~al~~~-----------------~~g~~~~~~~ 220 (276)
T 2b3t_A 162 H--ILQSDWFS-ALAGQQFAMIVSNPPYIDEQD-PHLQQGDVRFEPLTALVAA-----------------DSGMADIVHI 220 (276)
T ss_dssp E--EECCSTTG-GGTTCCEEEEEECCCCBCTTC-HHHHSSGGGSSCSTTTBCH-----------------HHHTHHHHHH
T ss_pred E--EEEcchhh-hcccCCccEEEECCCCCCccc-cccChhhhhcCcHHHHcCC-----------------CcHHHHHHHH
Confidence 1 22346654 356789999999977776543 11 0000 000000000 0112456788
Q ss_pred HHHHHHHhccCceEEEE
Q 017747 206 LRSRSEELVVGGRMVLI 222 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~ 222 (366)
++.-.+-|+|||++++.
T Consensus 221 l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 221 IEQSRNALVSGGFLLLE 237 (276)
T ss_dssp HHHHGGGEEEEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEE
Confidence 88889999999999997
No 134
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.84 E-value=1.9e-05 Score=70.91 Aligned_cols=77 Identities=14% Similarity=0.023 Sum_probs=46.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+ .+. + .+++..|........+-+.+. . .+++
T Consensus 70 ~~~~vLdiG~G~G~~~~~l--------~~~-----~-----~~v~~vD~~~~~~~~a~~~~~-----------~--~~~v 118 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALI--------AEI-----V-----DKVVSVEINEKMYNYASKLLS-----------Y--YNNI 118 (231)
T ss_dssp TTCEEEEECCTTSHHHHHH--------HHH-----S-----SEEEEEESCHHHHHHHHHHHT-----------T--CSSE
T ss_pred CCCEEEEEcCCCCHHHHHH--------HHH-----c-----CEEEEEeCCHHHHHHHHHHHh-----------h--cCCe
Confidence 4579999999999998753 222 1 567888875432222111111 1 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWl 160 (366)
++. +++.+.+.+++++|++++..++|++
T Consensus 119 ~~~~---~d~~~~~~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 119 KLIL---GDGTLGYEEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp EEEE---SCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred EEEE---CCcccccccCCCccEEEECCcHHHH
Confidence 333 4555534457899999999999875
No 135
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.82 E-value=4.4e-06 Score=74.95 Aligned_cols=102 Identities=10% Similarity=0.070 Sum_probs=60.8
Q ss_pred HHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchh
Q 017747 34 HITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDF 113 (366)
Q Consensus 34 ~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~ 113 (366)
|.+++--.....- .+.+.+|+|+|||+|+.++.+ . ...|..+++..|.....-.-.-+.+
T Consensus 34 p~ld~fY~~~~~~-l~~~~~VLDlGCG~GplAl~l--------~--------~~~p~a~~~A~Di~~~~leiar~~~--- 93 (200)
T 3fzg_A 34 ATLNDFYTYVFGN-IKHVSSILDFGCGFNPLALYQ--------W--------NENEKIIYHAYDIDRAEIAFLSSII--- 93 (200)
T ss_dssp GGHHHHHHHHHHH-SCCCSEEEEETCTTHHHHHHH--------H--------CSSCCCEEEEECSCHHHHHHHHHHH---
T ss_pred HhHHHHHHHHHhh-cCCCCeEEEecCCCCHHHHHH--------H--------hcCCCCEEEEEeCCHHHHHHHHHHH---
Confidence 5555443332221 345889999999999998752 1 2356689999998653222221111
Q ss_pred HHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcc
Q 017747 114 HRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTL 167 (366)
Q Consensus 114 ~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~ 167 (366)
...|. ..++-+. +.-.. .|++++|++.++..+|-|.+.+..+
T Consensus 94 -----~~~g~--~~~v~~~----d~~~~-~~~~~~DvVLa~k~LHlL~~~~~al 135 (200)
T 3fzg_A 94 -----GKLKT--TIKYRFL----NKESD-VYKGTYDVVFLLKMLPVLKQQDVNI 135 (200)
T ss_dssp -----HHSCC--SSEEEEE----CCHHH-HTTSEEEEEEEETCHHHHHHTTCCH
T ss_pred -----HhcCC--CccEEEe----ccccc-CCCCCcChhhHhhHHHhhhhhHHHH
Confidence 11121 1133232 33233 6889999999999999996655443
No 136
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.82 E-value=4.4e-05 Score=69.72 Aligned_cols=108 Identities=12% Similarity=0.102 Sum_probs=60.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|||+|||+|.++.. +.+ ..| -+++.-|+.......+-+... . . ..+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~--------~~~--------~~~-~~v~~id~~~~~~~~a~~~~~-------~-~----~~~ 109 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASK--------VQE--------API-DEHWIIECNDGVFQRLRDWAP-------R-Q----THK 109 (236)
T ss_dssp TTCEEEEEECCTTSHHHHH--------HTT--------SCE-EEEEEEECCHHHHHHHHHHGG-------G-C----SSE
T ss_pred cCCCeEEEECCCccHHHHH--------HHH--------hCC-cEEEEEeCCHHHHHHHHHHHh-------h-C----CCc
Confidence 3468999999999998764 211 134 567888886532222211110 0 0 112
Q ss_pred e-EEeccCCCccc--ccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYG--RLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 129 ~-f~~~vpgSFy~--~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+ ++. ++... .-+|++++|.++.-........ .. ..|...|
T Consensus 110 ~~~~~---~~a~~~~~~~~~~~FD~i~~D~~~~~~~~--~~--------------------------------~~~~~~~ 152 (236)
T 3orh_A 110 VIPLK---GLWEDVAPTLPDGHFDGILYDTYPLSEET--WH--------------------------------THQFNFI 152 (236)
T ss_dssp EEEEE---SCHHHHGGGSCTTCEEEEEECCCCCBGGG--TT--------------------------------THHHHHH
T ss_pred eEEEe---ehHHhhcccccccCCceEEEeeeecccch--hh--------------------------------hcchhhh
Confidence 2 222 33322 2378999999864221111000 00 1356667
Q ss_pred HHHHHHHhccCceEEEE
Q 017747 206 LRSRSEELVVGGRMVLI 222 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~ 222 (366)
|+.-++-|||||+|++.
T Consensus 153 ~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 153 KNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHTHHHHEEEEEEEEEC
T ss_pred hhhhhheeCCCCEEEEE
Confidence 77889999999999764
No 137
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.81 E-value=1.2e-05 Score=78.95 Aligned_cols=111 Identities=12% Similarity=0.135 Sum_probs=65.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.+ .++ .|..+|+..|.........-+.+. . ++..+..++
T Consensus 223 ~~~VLDlGcG~G~~s~~l--------a~~--------~p~~~V~gvD~s~~al~~Ar~n~~-------~-ngl~~~~~v~ 278 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTL--------LDK--------NPQAKVVFVDESPMAVASSRLNVE-------T-NMPEALDRCE 278 (375)
T ss_dssp CSEEEEETCTTCHHHHHH--------HHH--------CTTCEEEEEESCHHHHHHHHHHHH-------H-HCGGGGGGEE
T ss_pred CCeEEEEeCcchHHHHHH--------HHH--------CCCCEEEEEECcHHHHHHHHHHHH-------H-cCCCcCceEE
Confidence 379999999999998753 232 244889999986432222222111 1 110000122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++++ .+|++++|+++++-.+|+...++... ...||+.-
T Consensus 279 ~~~---~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~----------------------------------~~~~l~~~ 320 (375)
T 4dcm_A 279 FMI---NNALS-GVEPFRFNAVLCNPPFHQQHALTDNV----------------------------------AWEMFHHA 320 (375)
T ss_dssp EEE---CSTTT-TCCTTCEEEEEECCCC-------CCH----------------------------------HHHHHHHH
T ss_pred EEe---chhhc-cCCCCCeeEEEECCCcccCcccCHHH----------------------------------HHHHHHHH
Confidence 233 45555 56888999999999998854433221 12467777
Q ss_pred HHHhccCceEEEEe
Q 017747 210 SEELVVGGRMVLIL 223 (366)
Q Consensus 210 a~EL~~GG~lvl~~ 223 (366)
.+-|+|||+++++.
T Consensus 321 ~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 321 RRCLKINGELYIVA 334 (375)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHhCCCCcEEEEEE
Confidence 88999999999975
No 138
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.80 E-value=9e-05 Score=64.64 Aligned_cols=110 Identities=11% Similarity=0.063 Sum_probs=67.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.++ . .+..+|+..|+.......+-+.+. . .+ ..++
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~--------~---------~~~~~v~~vD~~~~~~~~a~~~~~-------~-~~---~~~v 95 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEAL--------S---------RGAASVLFVESDQRSAAVIARNIE-------A-LG---LSGA 95 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHH--------H---------TTCSEEEEEECCHHHHHHHHHHHH-------H-HT---CSCE
T ss_pred CCCEEEEeCCCcCHHHHHHH--------H---------CCCCeEEEEECCHHHHHHHHHHHH-------H-cC---CCce
Confidence 45789999999999987421 1 112579999986543332222111 1 11 1122
Q ss_pred -EEeccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 -f~~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++. +++.+-+ ++++++|++++...+||.. .++..+|
T Consensus 96 ~~~~---~d~~~~~~~~~~~~fD~i~~~~p~~~~~--------------------------------------~~~~~~l 134 (189)
T 3p9n_A 96 TLRR---GAVAAVVAAGTTSPVDLVLADPPYNVDS--------------------------------------ADVDAIL 134 (189)
T ss_dssp EEEE---SCHHHHHHHCCSSCCSEEEECCCTTSCH--------------------------------------HHHHHHH
T ss_pred EEEE---ccHHHHHhhccCCCccEEEECCCCCcch--------------------------------------hhHHHHH
Confidence 344 4554433 4688999999987666631 2333445
Q ss_pred HHHHH--HhccCceEEEEeecCCC
Q 017747 207 RSRSE--ELVVGGRMVLILLGRIG 228 (366)
Q Consensus 207 ~~Ra~--EL~~GG~lvl~~~g~~~ 228 (366)
....+ -|+|||++++....+..
T Consensus 135 ~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 135 AALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HHHHHSSSCCTTCEEEEEEETTSC
T ss_pred HHHHhcCccCCCeEEEEEecCCCC
Confidence 55555 89999999998876644
No 139
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.75 E-value=7.1e-06 Score=79.27 Aligned_cols=108 Identities=16% Similarity=0.264 Sum_probs=69.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..++. +.+. .|..+++..|+........-+.+ .. .+ ....+
T Consensus 197 ~~~VLDlGcG~G~~~~~--------la~~--------~~~~~v~~vD~s~~~l~~a~~~~-------~~-~~---~~~~~ 249 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVA--------FARH--------SPKIRLTLCDVSAPAVEASRATL-------AA-NG---VEGEV 249 (343)
T ss_dssp CSBCCBTTCTTSHHHHH--------HHHH--------CTTCBCEEEESBHHHHHHHHHHH-------HH-TT---CCCEE
T ss_pred CCeEEEecCccCHHHHH--------HHHH--------CCCCEEEEEECCHHHHHHHHHHH-------HH-hC---CCCEE
Confidence 45899999999999875 2232 23478999998643222221111 11 11 11222
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
. .++++. ++++++|+++++..+||... ....+...||+.-.
T Consensus 250 ~---~~d~~~--~~~~~fD~Iv~~~~~~~g~~----------------------------------~~~~~~~~~l~~~~ 290 (343)
T 2pjd_A 250 F---ASNVFS--EVKGRFDMIISNPPFHDGMQ----------------------------------TSLDAAQTLIRGAV 290 (343)
T ss_dssp E---ECSTTT--TCCSCEEEEEECCCCCSSSH----------------------------------HHHHHHHHHHHHHG
T ss_pred E---Eccccc--cccCCeeEEEECCCcccCcc----------------------------------CCHHHHHHHHHHHH
Confidence 2 345544 34789999999999997321 01245678889999
Q ss_pred HHhccCceEEEEee
Q 017747 211 EELVVGGRMVLILL 224 (366)
Q Consensus 211 ~EL~~GG~lvl~~~ 224 (366)
+-|+|||++++...
T Consensus 291 ~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 291 RHLNSGGELRIVAN 304 (343)
T ss_dssp GGEEEEEEEEEEEE
T ss_pred HhCCCCcEEEEEEc
Confidence 99999999999753
No 140
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.74 E-value=1.9e-05 Score=70.91 Aligned_cols=87 Identities=14% Similarity=0.002 Sum_probs=49.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcC-----CC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERG-----GG 124 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~-----~~ 124 (366)
...+|+|+|||+|..+..+ .+.... ...|..+|+..|.........-+.+. . .+ .
T Consensus 80 ~~~~VLdiG~G~G~~~~~l--------a~~~~~---~~~~~~~v~~vD~~~~~~~~a~~~~~-------~-~~~~~~~~- 139 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCM--------AIKMNV---LENKNSYVIGLERVKDLVNFSLENIK-------R-DKPELLKI- 139 (227)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHHTTT---TTCTTCEEEEEESCHHHHHHHHHHHH-------H-HCGGGGSS-
T ss_pred CCCEEEEECCCCCHHHHHH--------HHHhcc---cCCCCCEEEEEeCCHHHHHHHHHHHH-------H-cCcccccc-
Confidence 3579999999999988753 222110 01244789999986532222221111 1 11 0
Q ss_pred CCCceEEeccCCCccccc----CCCCcccEEEcccccccc
Q 017747 125 SSPSVYIAGYPGSFYGRL----FPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 125 ~~~~~f~~~vpgSFy~~l----fp~~s~~~~~S~~alhWl 160 (366)
.+-.+.. ++..+.+ ++.+++|++++..++|++
T Consensus 140 -~~v~~~~---~d~~~~~~~~~~~~~~fD~I~~~~~~~~~ 175 (227)
T 2pbf_A 140 -DNFKIIH---KNIYQVNEEEKKELGLFDAIHVGASASEL 175 (227)
T ss_dssp -TTEEEEE---CCGGGCCHHHHHHHCCEEEEEECSBBSSC
T ss_pred -CCEEEEE---CChHhcccccCccCCCcCEEEECCchHHH
Confidence 1122333 3554444 556789999999998863
No 141
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.74 E-value=0.0001 Score=66.15 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=25.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..+..+ .+.. . ..+|+..|+...
T Consensus 57 ~g~~VLDlGcGtG~~~~~l--------a~~~-------~-~~~V~gvD~s~~ 92 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHL--------ADIV-------D-EGIIYAVEYSAK 92 (210)
T ss_dssp SSCEEEEETCTTSHHHHHH--------HHHT-------T-TSEEEEECCCHH
T ss_pred CCCEEEEECCcCCHHHHHH--------HHHc-------C-CCEEEEEECCHH
Confidence 3579999999999988753 2221 1 268999998653
No 142
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.69 E-value=0.00014 Score=69.14 Aligned_cols=114 Identities=16% Similarity=0.144 Sum_probs=65.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+..+ .+ ..+..+++..|+........-+.++.+.... . .++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~----~---~~~ 150 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREV--------LR--------HGTVEHCDLVDIDGEVMEQSKQHFPQISRSL----A---DPR 150 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHH--------HT--------CTTCCEEEEEESCHHHHHHHHHHCHHHHGGG----G---CTT
T ss_pred CCCCeEEEEcCCCCHHHHHH--------Hh--------CCCCCEEEEEECCHHHHHHHHHHhHHhhccc----C---CCc
Confidence 45689999999999988642 11 1234689999986544333333332211110 0 122
Q ss_pred e-EEeccCCCcccccC--CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLF--PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lf--p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+ ++. ++..+-+. +++++|++++....++.. +..+.. ..|
T Consensus 151 v~~~~---~D~~~~~~~~~~~~fDvIi~d~~~~~~~--~~~l~~---------------------------------~~~ 192 (304)
T 3bwc_A 151 ATVRV---GDGLAFVRQTPDNTYDVVIIDTTDPAGP--ASKLFG---------------------------------EAF 192 (304)
T ss_dssp EEEEE---SCHHHHHHSSCTTCEEEEEEECC-----------CC---------------------------------HHH
T ss_pred EEEEE---CcHHHHHHhccCCceeEEEECCCCcccc--chhhhH---------------------------------HHH
Confidence 2 333 35443333 688999999976665521 111100 346
Q ss_pred HHHHHHHhccCceEEEEe
Q 017747 206 LRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~ 223 (366)
|+.-.+-|+|||+|++..
T Consensus 193 l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 193 YKDVLRILKPDGICCNQG 210 (304)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEec
Confidence 677789999999999985
No 143
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.68 E-value=0.0001 Score=66.01 Aligned_cols=87 Identities=10% Similarity=-0.049 Sum_probs=46.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +.. .+..+|+..|+.......+-+.+... ... ..+. ..-.
T Consensus 77 ~~~~vLDiG~G~G~~~~~la--------~~~-------~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~-~~~~--~~v~ 136 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFA--------RMV-------GCTGKVIGIDHIKELVDDSVNNVRKD--DPT-LLSS--GRVQ 136 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHH--------HHH-------CTTCEEEEEESCHHHHHHHHHHHHHH--CTH-HHHT--SSEE
T ss_pred CCCEEEEEcCCcCHHHHHHH--------HHh-------CCCcEEEEEeCCHHHHHHHHHHHHhh--ccc-ccCC--CcEE
Confidence 45799999999999987532 221 13368899998653322222211100 000 0000 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEccccccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHW 159 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhW 159 (366)
+.. ++......+++++|++++...++.
T Consensus 137 ~~~---~d~~~~~~~~~~fD~i~~~~~~~~ 163 (226)
T 1i1n_A 137 LVV---GDGRMGYAEEAPYDAIHVGAAAPV 163 (226)
T ss_dssp EEE---SCGGGCCGGGCCEEEEEECSBBSS
T ss_pred EEE---CCcccCcccCCCcCEEEECCchHH
Confidence 333 344433445778999998877643
No 144
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.66 E-value=3.5e-05 Score=73.48 Aligned_cols=82 Identities=11% Similarity=0.129 Sum_probs=49.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+. +.. ....+|+..|+..+.....-+.+ ...| ..++
T Consensus 75 ~~~~VLDiGcG~G~~~~~la--------~~~-------~~~~~v~gvD~s~~~~~~a~~~~--------~~~g---~~~v 128 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMS--------RVV-------GEKGLVVSVEYSRKICEIAKRNV--------ERLG---IENV 128 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HHH-------CTTCEEEEEESCHHHHHHHHHHH--------HHTT---CCSE
T ss_pred CcCEEEEecCCchHHHHHHH--------Hhc-------CCCCEEEEEECCHHHHHHHHHHH--------HHcC---CCCe
Confidence 35799999999999887532 221 11267899998653322221111 1111 1232
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWl 160 (366)
+.. +++.+.+.+.+++|++++...+|++
T Consensus 129 ~~~~---~d~~~~~~~~~~fD~Iv~~~~~~~~ 157 (317)
T 1dl5_A 129 IFVC---GDGYYGVPEFSPYDVIFVTVGVDEV 157 (317)
T ss_dssp EEEE---SCGGGCCGGGCCEEEEEECSBBSCC
T ss_pred EEEE---CChhhccccCCCeEEEEEcCCHHHH
Confidence 333 4665545567899999999999875
No 145
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.66 E-value=6.5e-06 Score=74.66 Aligned_cols=84 Identities=15% Similarity=0.118 Sum_probs=52.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. ..+|+..|+.......+-+.+. ..+. ..++
T Consensus 78 ~~~~vLD~gcG~G~~~~~l--------a~~----------~~~v~~vD~s~~~~~~a~~~~~--------~~~~--~~~~ 129 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQF--------ALT----------GMRVIAIDIDPVKIALARNNAE--------VYGI--ADKI 129 (241)
T ss_dssp CCSEEEETTCTTSHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHHHH--------HTTC--GGGE
T ss_pred CCCEEEECccccCHHHHHH--------HHc----------CCEEEEEECCHHHHHHHHHHHH--------HcCC--CcCe
Confidence 4579999999999999753 221 1788999986543333222111 1111 0122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCC
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPP 165 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~ 165 (366)
|+. +++.+- .+++++|+++++..+||......
T Consensus 130 ~~~~---~d~~~~-~~~~~~D~v~~~~~~~~~~~~~~ 162 (241)
T 3gdh_A 130 EFIC---GDFLLL-ASFLKADVVFLSPPWGGPDYATA 162 (241)
T ss_dssp EEEE---SCHHHH-GGGCCCSEEEECCCCSSGGGGGS
T ss_pred EEEE---CChHHh-cccCCCCEEEECCCcCCcchhhh
Confidence 333 466443 37889999999999999776544
No 146
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.65 E-value=8.1e-05 Score=65.52 Aligned_cols=100 Identities=13% Similarity=0.085 Sum_probs=60.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..+..+ .+. .|..+++..|........+-+.+. ..+ ..++
T Consensus 66 ~~~vLDiG~G~G~~~~~l--------~~~--------~~~~~v~~vD~s~~~~~~a~~~~~--------~~~---~~~v- 117 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPL--------SIV--------RPEAHFTLLDSLGKRVRFLRQVQH--------ELK---LENI- 117 (207)
T ss_dssp SSEEEEETCTTTTTHHHH--------HHH--------CTTSEEEEEESCHHHHHHHHHHHH--------HTT---CSSE-
T ss_pred CCeEEEECCCCCHHHHHH--------HHH--------CCCCEEEEEeCCHHHHHHHHHHHH--------HcC---CCCe-
Confidence 469999999999998753 222 234789999986532222211111 111 1222
Q ss_pred EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRS 210 (366)
Q Consensus 131 ~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra 210 (366)
..+.+++.+ +.|++++|++++... .++..+|+.-.
T Consensus 118 -~~~~~d~~~-~~~~~~~D~i~~~~~-------------------------------------------~~~~~~l~~~~ 152 (207)
T 1jsx_A 118 -EPVQSRVEE-FPSEPPFDGVISRAF-------------------------------------------ASLNDMVSWCH 152 (207)
T ss_dssp -EEEECCTTT-SCCCSCEEEEECSCS-------------------------------------------SSHHHHHHHHT
T ss_pred -EEEecchhh-CCccCCcCEEEEecc-------------------------------------------CCHHHHHHHHH
Confidence 122345533 346789999997420 02335667778
Q ss_pred HHhccCceEEEEe
Q 017747 211 EELVVGGRMVLIL 223 (366)
Q Consensus 211 ~EL~~GG~lvl~~ 223 (366)
+-|+|||++++..
T Consensus 153 ~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 153 HLPGEQGRFYALK 165 (207)
T ss_dssp TSEEEEEEEEEEE
T ss_pred HhcCCCcEEEEEe
Confidence 8999999999974
No 147
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.65 E-value=8.7e-05 Score=66.76 Aligned_cols=92 Identities=13% Similarity=0.094 Sum_probs=49.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+.... .. ....+..+|+..|.........-+.+......... . .+-.
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~--------~~--~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~----~~v~ 148 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYI--------KA--KGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLD-S----GQLL 148 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH--------HH--SCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHH-H----TSEE
T ss_pred CCCEEEEECCCccHHHHHHHHhc--------cc--ccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccC-C----CceE
Confidence 34799999999999987543221 10 00122358899998653333222222110000000 0 1112
Q ss_pred EEeccCCCcccccCCC-CcccEEEcccccccc
Q 017747 130 YIAGYPGSFYGRLFPN-NSLHFIHSSNSLHWL 160 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~-~s~~~~~S~~alhWl 160 (366)
+.. ++... .+|+ +++|++++..++|++
T Consensus 149 ~~~---~d~~~-~~~~~~~fD~I~~~~~~~~~ 176 (227)
T 1r18_A 149 IVE---GDGRK-GYPPNAPYNAIHVGAAAPDT 176 (227)
T ss_dssp EEE---SCGGG-CCGGGCSEEEEEECSCBSSC
T ss_pred EEE---CCccc-CCCcCCCccEEEECCchHHH
Confidence 333 35544 4455 789999999999874
No 148
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.64 E-value=0.00018 Score=65.75 Aligned_cols=43 Identities=12% Similarity=0.054 Sum_probs=28.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHH
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSV 106 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~l 106 (366)
...+|+|+|||+|..++.+...+ . .+..+|+..|+........
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~---------~-----~~~~~v~gvDis~~~l~~A 93 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLH---------R-----RSLRQVIASDVDPAPLELA 93 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHT---------G-----GGEEEEEEEESCHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHh---------c-----cCCCeEEEEECCHHHHHHH
Confidence 46899999999998877533221 0 1237899999865444433
No 149
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.62 E-value=0.00021 Score=67.87 Aligned_cols=119 Identities=12% Similarity=0.006 Sum_probs=66.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+.. +.+ ..+..+|+..|+........-+.++...... ..+ .+-
T Consensus 82 ~~~~~VLdiG~G~G~~~~~--------l~~--------~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~---~~~--~rv 140 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLRE--------VTR--------HKNVESITMVEIDAGVVSFCRQYLPNHNAGS---YDD--PRF 140 (294)
T ss_dssp TTCCEEEEESCTTCHHHHH--------HHT--------CTTCCEEEEECSCTTHHHHHHHHCHHHHSSC---TTC--TTC
T ss_pred CCCCEEEEEeCChhHHHHH--------HHh--------CCCCCEEEEEECCHHHHHHHHHhhhhccccc---ccC--Cce
Confidence 5678999999999998764 211 1234789999997765555544444211000 000 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
-++.+-...|.. .+++++|++++...-+|.. +..+ .-..|++.
T Consensus 141 ~~~~~D~~~~l~--~~~~~fDvIi~D~~~p~~~--~~~l---------------------------------~~~~f~~~ 183 (294)
T 3adn_A 141 KLVIDDGVNFVN--QTSQTFDVIISDCTDPIGP--GESL---------------------------------FTSAFYEG 183 (294)
T ss_dssp CEECSCSCC-----CCCCCEEEEEECC---------------------------------------------CCHHHHHH
T ss_pred EEEEChHHHHHh--hcCCCccEEEECCCCccCc--chhc---------------------------------cHHHHHHH
Confidence 244443333322 2578999999976554411 1001 01356778
Q ss_pred HHHHhccCceEEEEeec
Q 017747 209 RSEELVVGGRMVLILLG 225 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g 225 (366)
..+-|+|||+|++....
T Consensus 184 ~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 184 CKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp HHHTEEEEEEEEEEEEE
T ss_pred HHHhcCCCCEEEEecCC
Confidence 89999999999998743
No 150
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.62 E-value=7e-05 Score=69.02 Aligned_cols=125 Identities=10% Similarity=0.069 Sum_probs=67.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+ ..+ .+|+..|+.......+-+.+. ..+. ..++
T Consensus 49 ~~~~vLDlG~G~G~~~~~l--------a~--------~~~-~~v~gvDi~~~~~~~a~~n~~--------~~~~--~~~v 101 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLL--------ST--------RTK-AKIVGVEIQERLADMAKRSVA--------YNQL--EDQI 101 (259)
T ss_dssp SCCEEEETTCTTTHHHHHH--------HT--------TCC-CEEEEECCSHHHHHHHHHHHH--------HTTC--TTTE
T ss_pred CCCEEEEcCCchhHHHHHH--------HH--------hcC-CcEEEEECCHHHHHHHHHHHH--------HCCC--cccE
Confidence 4689999999999988742 22 123 389999986543332222111 1111 1122
Q ss_pred -EEeccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 -f~~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++. +++.+-. ++++++|+++|+-.++..... .... +......-......++..||
T Consensus 102 ~~~~---~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~--~~~~-----------------~~~~~~~a~~~~~~~~~~~l 159 (259)
T 3lpm_A 102 EIIE---YDLKKITDLIPKERADIVTCNPPYFATPDT--SLKN-----------------TNEHFRIARHEVMCTLEDTI 159 (259)
T ss_dssp EEEC---SCGGGGGGTSCTTCEEEEEECCCC------------------------------------------HHHHHHH
T ss_pred EEEE---CcHHHhhhhhccCCccEEEECCCCCCCccc--cCCC-----------------CchHHHhhhccccCCHHHHH
Confidence 333 4554333 678999999997544332110 0000 00000000111246788999
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||+|++..
T Consensus 160 ~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 160 RVAASLLKQGGKANFVH 176 (259)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHccCCcEEEEEE
Confidence 99999999999999965
No 151
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.62 E-value=6.3e-05 Score=74.94 Aligned_cols=112 Identities=18% Similarity=0.180 Sum_probs=64.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ ... .+.-+++.-|+..+...-.-+....+.... ...|.. ..++
T Consensus 173 ~gd~VLDLGCGtG~l~l~l--------A~~--------~g~~kVvGIDiS~~~lelAr~n~e~frkr~-~~~Gl~-~~rV 234 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQV--------AAA--------TNCKHHYGVEKADIPAKYAETMDREFRKWM-KWYGKK-HAEY 234 (438)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HHH--------CCCSEEEEEECCHHHHHHHHHHHHHHHHHH-HHHTBC-CCEE
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHH--------CCCCEEEEEeCCHHHHHHHHHHHHHHHHHH-HHhCCC-CCCe
Confidence 4578999999999998753 221 122468999986543222221111111101 111210 1233
Q ss_pred -EEeccCCCcccccCCC--CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPN--NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~--~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
|+. |+|.+..+++ .++|++++++.++| |. ...-|
T Consensus 235 efi~---GD~~~lp~~d~~~~aDVVf~Nn~~F~----pd------------------------------------l~~aL 271 (438)
T 3uwp_A 235 TLER---GDFLSEEWRERIANTSVIFVNNFAFG----PE------------------------------------VDHQL 271 (438)
T ss_dssp EEEE---CCTTSHHHHHHHHTCSEEEECCTTCC----HH------------------------------------HHHHH
T ss_pred EEEE---CcccCCccccccCCccEEEEcccccC----ch------------------------------------HHHHH
Confidence 333 6887655554 47999999877765 21 12224
Q ss_pred HHHHHHhccCceEEEE
Q 017747 207 RSRSEELVVGGRMVLI 222 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~ 222 (366)
....+.|+|||++|++
T Consensus 272 ~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 272 KERFANMKEGGRIVSS 287 (438)
T ss_dssp HHHHTTSCTTCEEEES
T ss_pred HHHHHcCCCCcEEEEe
Confidence 4567899999999987
No 152
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.61 E-value=0.0004 Score=66.98 Aligned_cols=104 Identities=16% Similarity=0.172 Sum_probs=62.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+ .+. +..+|+..|+.. ....+-+. .. ..+. ..++
T Consensus 64 ~~~~VLDiGcGtG~ls~~l--------a~~---------g~~~v~gvD~s~-~~~~a~~~-------~~-~~~~--~~~i 115 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFA--------AKA---------GAKKVLGVDQSE-ILYQAMDI-------IR-LNKL--EDTI 115 (340)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHT---------TCSEEEEEESST-HHHHHHHH-------HH-HTTC--TTTE
T ss_pred CCCEEEEeeccCcHHHHHH--------HHc---------CCCEEEEEChHH-HHHHHHHH-------HH-HcCC--CCcE
Confidence 4579999999999988642 221 125899999862 22222111 11 1121 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
++. ++..+--+|++++|+++|....+-+.. ..++..+|..
T Consensus 116 ~~~~---~d~~~~~~~~~~~D~Ivs~~~~~~l~~------------------------------------~~~~~~~l~~ 156 (340)
T 2fyt_A 116 TLIK---GKIEEVHLPVEKVDVIISEWMGYFLLF------------------------------------ESMLDSVLYA 156 (340)
T ss_dssp EEEE---SCTTTSCCSCSCEEEEEECCCBTTBTT------------------------------------TCHHHHHHHH
T ss_pred EEEE---eeHHHhcCCCCcEEEEEEcCchhhccC------------------------------------HHHHHHHHHH
Confidence 333 455444578899999999752211111 1244567888
Q ss_pred HHHHhccCceEE
Q 017747 209 RSEELVVGGRMV 220 (366)
Q Consensus 209 Ra~EL~~GG~lv 220 (366)
+.+-|+|||+++
T Consensus 157 ~~~~LkpgG~li 168 (340)
T 2fyt_A 157 KNKYLAKGGSVY 168 (340)
T ss_dssp HHHHEEEEEEEE
T ss_pred HHhhcCCCcEEE
Confidence 899999999998
No 153
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.61 E-value=0.00012 Score=65.49 Aligned_cols=126 Identities=11% Similarity=-0.002 Sum_probs=67.3
Q ss_pred CCceEEEeecCC-CCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 49 PKTINIADLGCS-SGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 49 ~~~~~IaDlGCs-~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
+...+|+|+||| +|..++.+. +.. ..+|+..|+.......+-+.+. . .+ ..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la--------~~~---------~~~v~~vD~s~~~~~~a~~~~~-------~-~~---~~ 105 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAE--------KFF---------NCKVTATEVDEEFFEYARRNIE-------R-NN---SN 105 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHH--------HHH---------CCEEEEEECCHHHHHHHHHHHH-------H-TT---CC
T ss_pred CCCCEEEEcCCCHHHHHHHHHH--------Hhc---------CCEEEEEECCHHHHHHHHHHHH-------H-hC---CC
Confidence 346899999999 999987532 210 2788999986533222221111 1 11 11
Q ss_pred ceEEeccCCCcc-cccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFY-GRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~f~~~vpgSFy-~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
--++. ++.. -.-+|++++|+++++-.++|...... ... ..-+...... ..+...||
T Consensus 106 v~~~~---~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~-~~~--------~~~~~~~~~~-----------~~~~~~~l 162 (230)
T 3evz_A 106 VRLVK---SNGGIIKGVVEGTFDVIFSAPPYYDKPLGRV-LTE--------REAIGGGKYG-----------EEFSVKLL 162 (230)
T ss_dssp CEEEE---CSSCSSTTTCCSCEEEEEECCCCC------------------------CCSSS-----------CHHHHHHH
T ss_pred cEEEe---CCchhhhhcccCceeEEEECCCCcCCccccc-cCh--------hhhhccCccc-----------hHHHHHHH
Confidence 22333 2321 12356789999999988877654111 000 0000000000 12346678
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-.+-|+|||++++.+..
T Consensus 163 ~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 163 EEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp HHHGGGEEEEEEEEEEEES
T ss_pred HHHHHHhCCCeEEEEEecc
Confidence 8888999999999998644
No 154
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.60 E-value=5.7e-05 Score=64.53 Aligned_cols=75 Identities=17% Similarity=0.151 Sum_probs=45.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+.. +..+++..|........+-+.+ .. .+ ..++
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~------------------~~~~v~~vD~~~~~~~~a~~~~-------~~-~~---~~~~ 85 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK------------------RCKFVYAIDYLDGAIEVTKQNL-------AK-FN---IKNC 85 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT------------------TSSEEEEEECSHHHHHHHHHHH-------HH-TT---CCSE
T ss_pred CCCEEEEeCCCCCHHHHHHHh------------------cCCeEEEEeCCHHHHHHHHHHH-------HH-cC---CCcE
Confidence 457999999999998875311 2378999998653222221111 11 11 1222
Q ss_pred EEeccCCCcccccCCCCcccEEEcccc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNS 156 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~a 156 (366)
- .+.+++.+ .+|++++|+++++..
T Consensus 86 ~--~~~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 86 Q--IIKGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp E--EEESCHHH-HGGGCCCSEEEECSC
T ss_pred E--EEECCccc-cccCCCCcEEEECCc
Confidence 1 12346655 677789999999876
No 155
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.59 E-value=0.0001 Score=68.32 Aligned_cols=126 Identities=18% Similarity=0.202 Sum_probs=68.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .++ .|..+++..|+-......+-+.+..+.. .+. ..++
T Consensus 36 ~~~~VLDlG~G~G~~~l~l--------a~~--------~~~~~v~gvDi~~~~~~~a~~n~~~~~~-----~~l--~~~v 92 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAV--------AAR--------LEKAEVTLYERSQEMAEFARRSLELPDN-----AAF--SARI 92 (260)
T ss_dssp SCEEEEECCSSSSHHHHHH--------HHH--------CTTEEEEEEESSHHHHHHHHHHTTSGGG-----TTT--GGGE
T ss_pred CCCEEEEeCChHhHHHHHH--------HHh--------CCCCeEEEEECCHHHHHHHHHHHHhhhh-----CCC--cceE
Confidence 4579999999999988753 222 2347899999865433333332221000 111 0122
Q ss_pred -EEeccCCCcccc-------cCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHH-HHH
Q 017747 130 -YIAGYPGSFYGR-------LFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQ-FQE 200 (366)
Q Consensus 130 -f~~~vpgSFy~~-------lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q-~~~ 200 (366)
++. +++.+- .++++++|+++++--+++..... . +...++.+.. ...
T Consensus 93 ~~~~---~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~----~------------------~~~~~~~a~~~~~~ 147 (260)
T 2ozv_A 93 EVLE---ADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRR----T------------------PDALKAEAHAMTEG 147 (260)
T ss_dssp EEEE---CCTTCCHHHHHHTTCCTTCEEEEEECCCC-------------------------------------------C
T ss_pred EEEe---CCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCC----C------------------cCHHHHHHhhcCcC
Confidence 333 355432 36789999999985555432100 0 0011111111 123
Q ss_pred HHHHHHHHHHHHhccCceEEEEe
Q 017747 201 DFTLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
++..||+.-.+-|+|||+|++..
T Consensus 148 ~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 148 LFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCCEEEEEE
Confidence 47888999999999999999976
No 156
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.58 E-value=0.00016 Score=65.99 Aligned_cols=76 Identities=14% Similarity=0.083 Sum_probs=45.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+...+ .|..+++..|+.......+-+.+. ..+. ...+
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~---------------~~~~~v~~~D~~~~~~~~a~~~~~--------~~~~--~~~v 147 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIV---------------GPEGRVVSYEIREDFAKLAWENIK--------WAGF--DDRV 147 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTSEEEEECSCHHHHHHHHHHHH--------HHTC--TTTE
T ss_pred CCCEEEEecCCchHHHHHHHHHh---------------CCCeEEEEEecCHHHHHHHHHHHH--------HcCC--CCce
Confidence 45799999999999987643322 234789999986533222221111 1121 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
- .+.+++. ..+|++++|++++
T Consensus 148 ~--~~~~d~~-~~~~~~~~D~v~~ 168 (255)
T 3mb5_A 148 T--IKLKDIY-EGIEEENVDHVIL 168 (255)
T ss_dssp E--EECSCGG-GCCCCCSEEEEEE
T ss_pred E--EEECchh-hccCCCCcCEEEE
Confidence 1 2235665 4588999999997
No 157
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.58 E-value=0.00015 Score=77.69 Aligned_cols=116 Identities=11% Similarity=0.033 Sum_probs=72.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+. ..|..+|+..|+....-...-+.+.... .....+ ..++
T Consensus 721 ~g~rVLDVGCGTG~lai~--------LAr~-------g~p~a~VtGVDIS~emLe~AReRLa~~l--nAkr~g---l~nV 780 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDS--------LLDY-------PTSLQTIIGVDISPKGLARAAKMLHVKL--NKEACN---VKSA 780 (950)
T ss_dssp CCSEEEEETCSSSHHHHH--------HTSS-------CCCCCEEEEEESCHHHHHHHHHHHHHHT--TTTCSS---CSEE
T ss_pred CCCEEEEECCCCCHHHHH--------HHHh-------CCCCCeEEEEECCHHHHHHHHHHhhhcc--chhhcC---CCce
Confidence 468999999999999874 2121 1234689999997644333322221000 000001 1223
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|.. |+..+-.++++++|+++++.++||+.. | +...||+.
T Consensus 781 efiq---GDa~dLp~~d~sFDlVV~~eVLeHL~d-p------------------------------------~l~~~L~e 820 (950)
T 3htx_A 781 TLYD---GSILEFDSRLHDVDIGTCLEVIEHMEE-D------------------------------------QACEFGEK 820 (950)
T ss_dssp EEEE---SCTTSCCTTSCSCCEEEEESCGGGSCH-H------------------------------------HHHHHHHH
T ss_pred EEEE---CchHhCCcccCCeeEEEEeCchhhCCh-H------------------------------------HHHHHHHH
Confidence 333 566665678899999999999999744 1 22345667
Q ss_pred HHHHhccCceEEEEeecC
Q 017747 209 RSEELVVGGRMVLILLGR 226 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~ 226 (366)
-.+-|+|| .++++.+..
T Consensus 821 I~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 821 VLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp HHHTTCCS-EEEEEECBG
T ss_pred HHHHcCCC-EEEEEecCc
Confidence 78999999 888887654
No 158
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.57 E-value=6.1e-05 Score=68.24 Aligned_cols=80 Identities=19% Similarity=0.160 Sum_probs=45.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+. +. .+ .+|+..|.........-+.+ . ..+ ..++
T Consensus 91 ~~~~vLdiG~G~G~~~~~la--------~~--------~~-~~v~~vD~~~~~~~~a~~~~-------~-~~~---~~~v 142 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALIS--------EI--------VK-TDVYTIERIPELVEFAKRNL-------E-RAG---VKNV 142 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHH--------HH--------HC-SCEEEEESCHHHHHHHHHHH-------H-HTT---CCSE
T ss_pred CCCEEEEEeCCcCHHHHHHH--------HH--------hC-CEEEEEeCCHHHHHHHHHHH-------H-HcC---CCCc
Confidence 35799999999999987532 22 12 57888887542222111111 1 111 1233
Q ss_pred EEeccCCCcccccCCCC-cccEEEcccccccc
Q 017747 130 YIAGYPGSFYGRLFPNN-SLHFIHSSNSLHWL 160 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~-s~~~~~S~~alhWl 160 (366)
- .+.+++ ..-+|++ .+|+++++.++|++
T Consensus 143 ~--~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~ 171 (235)
T 1jg1_A 143 H--VILGDG-SKGFPPKAPYDVIIVTAGAPKI 171 (235)
T ss_dssp E--EEESCG-GGCCGGGCCEEEEEECSBBSSC
T ss_pred E--EEECCc-ccCCCCCCCccEEEECCcHHHH
Confidence 1 122455 3334554 49999999988874
No 159
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.56 E-value=7.6e-05 Score=71.81 Aligned_cols=115 Identities=14% Similarity=0.033 Sum_probs=69.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+.. +.++ .|..++...|+-.......-+.++. .. .++
T Consensus 88 p~~~rVLdIG~G~G~la~~--------la~~--------~p~~~v~~VEidp~vi~~Ar~~~~~----------~~-~~r 140 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARY--------FADV--------YPQSRNTVVELDAELARLSREWFDI----------PR-APR 140 (317)
T ss_dssp GGGCEEEEESCGGGHHHHH--------HHHH--------STTCEEEEEESCHHHHHHHHHHSCC----------CC-TTT
T ss_pred CCCCEEEEEECCcCHHHHH--------HHHH--------CCCcEEEEEECCHHHHHHHHHhccc----------cC-CCc
Confidence 4467999999999988764 3332 2346888888865322222222211 00 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ ++.+-...|... ++++++|++++....+| ..|..+.. ..|++
T Consensus 141 v~v~~~Da~~~l~~-~~~~~fDvIi~D~~~~~--~~~~~L~t---------------------------------~efl~ 184 (317)
T 3gjy_A 141 VKIRVDDARMVAES-FTPASRDVIIRDVFAGA--ITPQNFTT---------------------------------VEFFE 184 (317)
T ss_dssp EEEEESCHHHHHHT-CCTTCEEEEEECCSTTS--CCCGGGSB---------------------------------HHHHH
T ss_pred eEEEECcHHHHHhh-ccCCCCCEEEECCCCcc--ccchhhhH---------------------------------HHHHH
Confidence 2 444332233222 46789999999877776 23333321 24677
Q ss_pred HHHHHhccCceEEEEeecC
Q 017747 208 SRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~g~ 226 (366)
...+-|+|||+|++.....
T Consensus 185 ~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 185 HCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp HHHHHEEEEEEEEEEEEEC
T ss_pred HHHHhcCCCcEEEEEecCC
Confidence 8889999999999998643
No 160
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.56 E-value=7.1e-05 Score=68.10 Aligned_cols=100 Identities=13% Similarity=0.129 Sum_probs=60.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ ... .|..+|+..|........+-+.. ...+ ..++
T Consensus 70 ~~~~vLDiG~G~G~~~~~l--------a~~--------~~~~~v~~vD~s~~~~~~a~~~~--------~~~~---~~~v 122 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPI--------KIC--------FPHLHVTIVDSLNKRITFLEKLS--------EALQ---LENT 122 (240)
T ss_dssp GCCEEEEECSSSCTTHHHH--------HHH--------CTTCEEEEEESCHHHHHHHHHHH--------HHHT---CSSE
T ss_pred CCCEEEEecCCCCHHHHHH--------HHh--------CCCCEEEEEeCCHHHHHHHHHHH--------HHcC---CCCE
Confidence 4579999999999998753 221 23478999998653222221111 1111 1232
Q ss_pred -EEeccCCCcccccCC---CCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFP---NNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp---~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
|+. +++.+-.++ ++++|+++|... . |+..+
T Consensus 123 ~~~~---~d~~~~~~~~~~~~~fD~V~~~~~------------~-------------------------------~~~~~ 156 (240)
T 1xdz_A 123 TFCH---DRAETFGQRKDVRESYDIVTARAV------------A-------------------------------RLSVL 156 (240)
T ss_dssp EEEE---SCHHHHTTCTTTTTCEEEEEEECC------------S-------------------------------CHHHH
T ss_pred EEEe---ccHHHhcccccccCCccEEEEecc------------C-------------------------------CHHHH
Confidence 333 455443343 679999998440 0 23456
Q ss_pred HHHHHHHhccCceEEEE
Q 017747 206 LRSRSEELVVGGRMVLI 222 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~ 222 (366)
|+.-.+-|+|||++++.
T Consensus 157 l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 157 SELCLPLVKKNGLFVAL 173 (240)
T ss_dssp HHHHGGGEEEEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEE
Confidence 67778999999999886
No 161
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.52 E-value=0.0002 Score=68.73 Aligned_cols=104 Identities=18% Similarity=0.175 Sum_probs=61.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.+ .+. +..+|+..|+. .....+-+. .. ..+. .+++
T Consensus 39 ~~~VLDiGcGtG~ls~~l--------a~~---------g~~~v~~vD~s-~~~~~a~~~-------~~-~~~~--~~~i~ 90 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFA--------AKH---------GAKHVIGVDMS-SIIEMAKEL-------VE-LNGF--SDKIT 90 (328)
T ss_dssp TCEEEEETCTTSHHHHHH--------HHT---------CCSEEEEEESS-THHHHHHHH-------HH-HTTC--TTTEE
T ss_pred CCEEEEecCccHHHHHHH--------HHC---------CCCEEEEEChH-HHHHHHHHH-------HH-HcCC--CCCEE
Confidence 479999999999988642 221 12589999986 322211111 11 1121 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
++. +++.+-.+|++++|+++|....+.+... .++..+|..+
T Consensus 91 ~~~---~d~~~~~~~~~~~D~Ivs~~~~~~l~~~------------------------------------~~~~~~l~~~ 131 (328)
T 1g6q_1 91 LLR---GKLEDVHLPFPKVDIIISEWMGYFLLYE------------------------------------SMMDTVLYAR 131 (328)
T ss_dssp EEE---SCTTTSCCSSSCEEEEEECCCBTTBSTT------------------------------------CCHHHHHHHH
T ss_pred EEE---CchhhccCCCCcccEEEEeCchhhcccH------------------------------------HHHHHHHHHH
Confidence 333 4554444777899999997544433211 1234567888
Q ss_pred HHHhccCceEEE
Q 017747 210 SEELVVGGRMVL 221 (366)
Q Consensus 210 a~EL~~GG~lvl 221 (366)
.+-|+|||+++.
T Consensus 132 ~~~LkpgG~li~ 143 (328)
T 1g6q_1 132 DHYLVEGGLIFP 143 (328)
T ss_dssp HHHEEEEEEEES
T ss_pred HhhcCCCeEEEE
Confidence 999999999983
No 162
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.52 E-value=0.00016 Score=68.99 Aligned_cols=128 Identities=19% Similarity=0.085 Sum_probs=69.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ .+.. .+..+|+.+|+.......+-+.+. . .| ..++
T Consensus 118 ~g~~VLDlg~G~G~~t~~l--------a~~~-------~~~~~v~avD~s~~~l~~a~~~~~-------~-~g---~~~v 171 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYL--------AQLM-------RNDGVIYAFDVDENRLRETRLNLS-------R-LG---VLNV 171 (315)
T ss_dssp TTCEEEECCSSCSHHHHHH--------HHHT-------TTCSEEEEECSCHHHHHHHHHHHH-------H-HT---CCSE
T ss_pred CCCEEEEeCCCCCHHHHHH--------HHHh-------CCCCEEEEEcCCHHHHHHHHHHHH-------H-hC---CCeE
Confidence 3479999999999999853 2221 123789999987543333322221 1 12 1232
Q ss_pred -EEeccCCCcccccCCCCcccEEEcc---cccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSS---NSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~---~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++. +++..-..+++++|.+++. +.+.-+.+.|..... .++.. .....+.-..+
T Consensus 172 ~~~~---~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~---------------~~~~~-----~~~~~~~q~~~ 228 (315)
T 1ixk_A 172 ILFH---SSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWN---------------RTMDD-----IKFCQGLQMRL 228 (315)
T ss_dssp EEES---SCGGGGGGGCCCEEEEEEECCTTSTTTCC-----------------------CCHHH-----HHHHHHHHHHH
T ss_pred EEEE---CChhhcccccccCCEEEEeCCCCCcccccCChhHhhc---------------CCHHH-----HHHHHHHHHHH
Confidence 333 3443322346789999873 112212222321100 01111 12334455688
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|+.-.+-|+|||+|+++....
T Consensus 229 L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 229 LEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp HHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHhCCCCCEEEEEeCCC
Confidence 888899999999999987543
No 163
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.50 E-value=0.00015 Score=69.29 Aligned_cols=119 Identities=13% Similarity=0.117 Sum_probs=69.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHH-HhhhcCCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQ-LRNERGGGSSP 127 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~-~~~~~~~~~~~ 127 (366)
+.+.+|+|+|||+|..+..+ .+ ..+..+++..|+........-+.++.+... +. . .+
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~----~--~~ 133 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREV--------LK--------HPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD----D--PR 133 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHH--------TT--------STTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG----C--TT
T ss_pred CCCCeEEEEcCCcCHHHHHH--------Hh--------cCCCCEEEEEECCHHHHHHHHHHhHhhcccccc----C--Cc
Confidence 45689999999999988642 11 123468999998654333333333211000 00 0 11
Q ss_pred ceEEeccCCCccccc-CCCCcccEEEccccccc-ccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 128 SVYIAGYPGSFYGRL-FPNNSLHFIHSSNSLHW-LSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 128 ~~f~~~vpgSFy~~l-fp~~s~~~~~S~~alhW-ls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
--++.+ +..+-+ .+++++|++++....|| ++..+..+. ...|
T Consensus 134 v~~~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~---------------------------------~~~~ 177 (314)
T 1uir_A 134 AVLVID---DARAYLERTEERYDVVIIDLTDPVGEDNPARLLY---------------------------------TVEF 177 (314)
T ss_dssp EEEEES---CHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGS---------------------------------SHHH
T ss_pred eEEEEc---hHHHHHHhcCCCccEEEECCCCcccccCcchhcc---------------------------------HHHH
Confidence 123333 333222 25789999999988777 222111110 1346
Q ss_pred HHHHHHHhccCceEEEEeec
Q 017747 206 LRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g 225 (366)
++.-.+-|+|||+|++....
T Consensus 178 l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 178 YRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp HHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEccC
Confidence 67778999999999998644
No 164
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.50 E-value=0.00028 Score=63.66 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=25.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..+..+.+.+ .|..+|+..|+..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~---------------g~~~~v~gvD~s~ 112 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIV---------------GPDGLVYAVEFSH 112 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTCEEEEECCCH
T ss_pred CCCEEEEEcccCCHHHHHHHHHh---------------CCCcEEEEEECCH
Confidence 35799999999999987533222 1336889999864
No 165
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.49 E-value=0.0003 Score=63.42 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=25.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..+..+ .+.+ +..+|+..|....
T Consensus 74 ~~~~VLDlGcG~G~~~~~l--------a~~~--------~~~~v~gvD~s~~ 109 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHV--------ADIA--------DKGIVYAIEYAPR 109 (230)
T ss_dssp TTCEEEEESCCSSHHHHHH--------HHHT--------TTSEEEEEESCHH
T ss_pred CCCEEEEEcccCCHHHHHH--------HHHc--------CCcEEEEEECCHH
Confidence 4579999999999998753 2221 1368899998653
No 166
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.47 E-value=8.9e-05 Score=71.04 Aligned_cols=36 Identities=14% Similarity=0.128 Sum_probs=26.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..++.+...+ .|..+|+..|+..
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~---------------g~~~~v~~vD~~~ 140 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAV---------------GSQGRVISFEVRK 140 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTCEEEEEESSH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHh---------------CCCceEEEEeCCH
Confidence 35799999999999998643222 2347888888854
No 167
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.46 E-value=0.00018 Score=66.07 Aligned_cols=37 Identities=11% Similarity=0.156 Sum_probs=26.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
.+.+|+|+|||+|..|+.+ .+. -++..+|+..|+...
T Consensus 63 ~~~~VLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~s~~ 99 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWM--------ARE-------LPADGQLLTLEADAH 99 (248)
T ss_dssp TCSEEEEECCTTSHHHHHH--------HTT-------SCTTCEEEEEECCHH
T ss_pred CCCEEEEecCCchHHHHHH--------HHh-------CCCCCEEEEEECCHH
Confidence 3579999999999998752 221 122588999998653
No 168
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.45 E-value=4.3e-05 Score=67.85 Aligned_cols=79 Identities=16% Similarity=0.077 Sum_probs=44.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.++ .+ .. .+|+..|+.......+-+.+. . .+.. ..++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~--------~~--------~~-~~v~gvD~s~~~l~~a~~~~~-------~-~~~~-~~~v~ 107 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEAL--------SR--------QA-KKVTFLELDKTVANQLKKNLQ-------T-LKCS-SEQAE 107 (201)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HT--------TC-SEEEEECSCHHHHHHHHHHHH-------H-TTCC-TTTEE
T ss_pred CCeEEEcCCccCHHHHHHH--------Hc--------cC-CEEEEEECCHHHHHHHHHHHH-------H-hCCC-ccceE
Confidence 4689999999999987421 11 11 579999987543333322221 1 1110 0222
Q ss_pred EEeccCCCcccccC--CCCc-ccEEEcccccc
Q 017747 130 YIAGYPGSFYGRLF--PNNS-LHFIHSSNSLH 158 (366)
Q Consensus 130 f~~~vpgSFy~~lf--p~~s-~~~~~S~~alh 158 (366)
|+. +++.+-+. ++++ +|++++...+|
T Consensus 108 ~~~---~d~~~~~~~~~~~~~fD~I~~~~~~~ 136 (201)
T 2ift_A 108 VIN---QSSLDFLKQPQNQPHFDVVFLDPPFH 136 (201)
T ss_dssp EEC---SCHHHHTTSCCSSCCEEEEEECCCSS
T ss_pred EEE---CCHHHHHHhhccCCCCCEEEECCCCC
Confidence 333 45544332 4678 99999865544
No 169
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.43 E-value=0.00043 Score=63.16 Aligned_cols=86 Identities=8% Similarity=-0.006 Sum_probs=45.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+.... |..+|+..|+.......+-+.+. ..+.. ..--
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~----------------~~~~v~gvD~s~~~~~~a~~~~~--------~~~~~-~~v~ 119 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL----------------NGWYFLATEVDDMCFNYAKKNVE--------QNNLS-DLIK 119 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH----------------HCCEEEEEESCHHHHHHHHHHHH--------HTTCT-TTEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC----------------CCCeEEEEECCHHHHHHHHHHHH--------HcCCC-ccEE
Confidence 35799999999999887532221 12789999986543332222111 11111 1122
Q ss_pred EEeccCCC-cccccCC---CCcccEEEccccccccc
Q 017747 130 YIAGYPGS-FYGRLFP---NNSLHFIHSSNSLHWLS 161 (366)
Q Consensus 130 f~~~vpgS-Fy~~lfp---~~s~~~~~S~~alhWls 161 (366)
|+.+--.+ +.+ .++ ++++|+++|+-.+|+..
T Consensus 120 ~~~~d~~~~~~~-~~~~~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 120 VVKVPQKTLLMD-ALKEESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp EEECCTTCSSTT-TSTTCCSCCBSEEEECCCCC---
T ss_pred EEEcchhhhhhh-hhhcccCCcccEEEECCCCccCc
Confidence 44432112 222 244 36899999987777644
No 170
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.42 E-value=0.00023 Score=65.81 Aligned_cols=79 Identities=11% Similarity=0.123 Sum_probs=45.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+...+ .|..+++..|+.......+-+.+. ...|.. ..++
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~~v~~vD~~~~~~~~a~~~~~-------~~~g~~-~~~v 155 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAV---------------GPAGQVISYEQRADHAEHARRNVS-------GCYGQP-PDNW 155 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTSEEEEECSCHHHHHHHHHHHH-------HHHTSC-CTTE
T ss_pred CCCEEEEEcccccHHHHHHHHHh---------------CCCCEEEEEeCCHHHHHHHHHHHH-------HhcCCC-CCcE
Confidence 35799999999999987533222 234789999985432222221111 100100 1122
Q ss_pred EEeccCCCcccccCCCCcccEEEc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
- .+.+++.+..++++++|++++
T Consensus 156 ~--~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 156 R--LVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp E--EECSCGGGCCCCTTCEEEEEE
T ss_pred E--EEECchHhcCCCCCceeEEEE
Confidence 1 233577666678889999998
No 171
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.41 E-value=0.00023 Score=66.14 Aligned_cols=75 Identities=9% Similarity=0.133 Sum_probs=43.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+...+ .|..+++..|+.......+-+. .....| ..++
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~---------------~~~~~v~~vD~s~~~~~~a~~~-------~~~~~g---~~~v 164 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYAL---------------NGKGTLTVVERDEDNLKKAMDN-------LSEFYD---IGNV 164 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------TTSSEEEEECSCHHHHHHHHHH-------HHTTSC---CTTE
T ss_pred CcCEEEEecCCCCHHHHHHHHHc---------------CCCCEEEEEECCHHHHHHHHHH-------HHhcCC---CCcE
Confidence 35799999999999987543222 2347899999854322211111 111001 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
|.. +++.+ .+|++++|++++
T Consensus 165 ~~~~---~d~~~-~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 165 RTSR---SDIAD-FISDQMYDAVIA 185 (275)
T ss_dssp EEEC---SCTTT-CCCSCCEEEEEE
T ss_pred EEEE---Cchhc-cCcCCCccEEEE
Confidence 333 46654 678889999997
No 172
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.41 E-value=0.00034 Score=61.86 Aligned_cols=26 Identities=15% Similarity=0.046 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHhccCceEEEEeecC
Q 017747 201 DFTLFLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 201 D~~~FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
.....|+.-.+-|+|||+|++..+..
T Consensus 117 l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 117 IGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 44566777789999999999987643
No 173
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.41 E-value=8.9e-05 Score=66.48 Aligned_cols=37 Identities=11% Similarity=0.209 Sum_probs=26.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
++.+|+|+|||+|..|+.+ .+. -++..+|+..|+...
T Consensus 58 ~~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~~~~ 94 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRM--------ARL-------LQPGARLLTMEINPD 94 (221)
T ss_dssp CCSEEEEECCTTSHHHHHH--------HTT-------SCTTCEEEEEESCHH
T ss_pred CCCEEEEECCCCCHHHHHH--------HHh-------CCCCCEEEEEeCChH
Confidence 3579999999999999753 221 123478999998653
No 174
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.38 E-value=8.2e-05 Score=63.01 Aligned_cols=18 Identities=22% Similarity=0.113 Sum_probs=15.4
Q ss_pred CceEEEeecCCCCcchHH
Q 017747 50 KTINIADLGCSSGPNTLA 67 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~ 67 (366)
...+|+|+|||+|..++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~ 58 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLE 58 (171)
T ss_dssp TCCEEEEETCSSCHHHHH
T ss_pred CCCeEEEeCCCcCHHHHH
Confidence 457899999999998875
No 175
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.37 E-value=0.00019 Score=68.39 Aligned_cols=102 Identities=9% Similarity=-0.004 Sum_probs=61.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
....+|+|+|||+|+.|...+. + .+..+|+.-|+....-...-+.+. ..|. .+-
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA-------~---------~~ga~V~gIDis~~~l~~Ar~~~~--------~~gl--~~v 174 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLS-------H---------VYGMRVNVVEIEPDIAELSRKVIE--------GLGV--DGV 174 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHH-------H---------TTCCEEEEEESSHHHHHHHHHHHH--------HHTC--CSE
T ss_pred CCcCEEEEECCCccHHHHHHHH-------H---------ccCCEEEEEECCHHHHHHHHHHHH--------hcCC--CCe
Confidence 4578999999999998764321 1 123789999986532222211111 1111 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
-|+.+ +..+ +|++++|++++... +| |...+|+.
T Consensus 175 ~~v~g---Da~~--l~d~~FDvV~~~a~------~~------------------------------------d~~~~l~e 207 (298)
T 3fpf_A 175 NVITG---DETV--IDGLEFDVLMVAAL------AE------------------------------------PKRRVFRN 207 (298)
T ss_dssp EEEES---CGGG--GGGCCCSEEEECTT------CS------------------------------------CHHHHHHH
T ss_pred EEEEC---chhh--CCCCCcCEEEECCC------cc------------------------------------CHHHHHHH
Confidence 34553 4433 46899999997543 12 12234567
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-.+-|+|||+|++..
T Consensus 208 l~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 208 IHRYVDTETRIIYRT 222 (298)
T ss_dssp HHHHCCTTCEEEEEE
T ss_pred HHHHcCCCcEEEEEc
Confidence 789999999999864
No 176
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.35 E-value=0.00035 Score=66.14 Aligned_cols=115 Identities=11% Similarity=0.012 Sum_probs=62.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+..+ .+ ..+..+|+..|+...-....-+.++.+...+. .++
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~-------~~~ 145 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREV--------LK--------HDSVEKAILCEVDGLVIEAARKYLKQTSCGFD-------DPR 145 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHH--------TT--------STTCSEEEEEESCHHHHHHHHHHCHHHHGGGG-------CTT
T ss_pred CCCCEEEEEcCCcCHHHHHH--------Hh--------cCCCCEEEEEECCHHHHHHHHHHhHhhccccC-------CCc
Confidence 45689999999999988642 11 12347899999865433333333322111110 122
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++.+ +..+-+ .+++++|++++...-+|... +..+ ....||
T Consensus 146 v~~~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~~~-~~~l---------------------------------~~~~~l 188 (296)
T 1inl_A 146 AEIVIA---NGAEYVRKFKNEFDVIIIDSTDPTAGQ-GGHL---------------------------------FTEEFY 188 (296)
T ss_dssp EEEEES---CHHHHGGGCSSCEEEEEEEC-----------C---------------------------------CSHHHH
T ss_pred eEEEEC---cHHHHHhhCCCCceEEEEcCCCcccCc-hhhh---------------------------------hHHHHH
Confidence 2 3333 432222 24678999998655555321 1111 113466
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||+|++..
T Consensus 189 ~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 189 QACYDALKEDGVFSAET 205 (296)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHhcCCCcEEEEEc
Confidence 77789999999999985
No 177
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.35 E-value=0.00072 Score=61.70 Aligned_cols=39 Identities=13% Similarity=0.040 Sum_probs=27.1
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
+.+|+|+|||+|..|+.+.+.+ ... .|..+|+..|+...
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~--------~~~----~~~~~V~gvD~s~~ 120 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLT--------KIM----GIDCQVIGIDRDLS 120 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHH--------HHT----TCCCEEEEEESCCT
T ss_pred CCEEEEEeCCCCHHHHHHHHhh--------hhc----CCCCEEEEEeCChH
Confidence 4699999999999998643321 111 23478999998654
No 178
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.35 E-value=0.00046 Score=61.40 Aligned_cols=101 Identities=15% Similarity=0.098 Sum_probs=59.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. ..+|+..|+.......+-+. . ...+. ..++
T Consensus 55 ~~~~vLDlGcG~G~~~~~l--------a~~----------~~~v~~vD~s~~~~~~a~~~-------~-~~~g~--~~~v 106 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEW--------CLA----------GGRAITIEPRADRIENIQKN-------I-DTYGL--SPRM 106 (204)
T ss_dssp TTCEEEEETCTTCHHHHHH--------HHT----------TCEEEEEESCHHHHHHHHHH-------H-HHTTC--TTTE
T ss_pred CCCEEEEecCCCCHHHHHH--------HHc----------CCEEEEEeCCHHHHHHHHHH-------H-HHcCC--CCCE
Confidence 4579999999999998752 221 26788999865322222111 1 11111 1122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
++. +++.+.+....++|++++..++ + .. +|+.
T Consensus 107 ~~~~---~d~~~~~~~~~~~D~v~~~~~~-----------~--------------------------------~~-~l~~ 139 (204)
T 3njr_A 107 RAVQ---GTAPAALADLPLPEAVFIGGGG-----------S--------------------------------QA-LYDR 139 (204)
T ss_dssp EEEE---SCTTGGGTTSCCCSEEEECSCC-----------C--------------------------------HH-HHHH
T ss_pred EEEe---CchhhhcccCCCCCEEEECCcc-----------c--------------------------------HH-HHHH
Confidence 333 4555544444578998865432 0 11 3455
Q ss_pred HHHHhccCceEEEEeec
Q 017747 209 RSEELVVGGRMVLILLG 225 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g 225 (366)
-.+-|+|||++++....
T Consensus 140 ~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 140 LWEWLAPGTRIVANAVT 156 (204)
T ss_dssp HHHHSCTTCEEEEEECS
T ss_pred HHHhcCCCcEEEEEecC
Confidence 57889999999998743
No 179
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.35 E-value=0.0004 Score=67.11 Aligned_cols=114 Identities=17% Similarity=0.117 Sum_probs=66.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+.. +.+ ..|..+|+..|+........-+.++.+...+. .++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~--------la~--------~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~-------~~r 175 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLRE--------VAR--------HASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE-------DPR 175 (334)
T ss_dssp SCCCEEEEETCSSSHHHHH--------HTT--------CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG-------STT
T ss_pred CCCCEEEEECCCccHHHHH--------HHH--------cCCCCEEEEEECCHHHHHHHHHHHHhhccccC-------CCc
Confidence 4568999999999998864 211 13447899999876444444333332110110 112
Q ss_pred e-EEeccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+ ++. ++..+-+ ++++++|++++...-+|-. +..+ ....|
T Consensus 176 v~~~~---~D~~~~l~~~~~~~fDlIi~d~~~p~~~--~~~l---------------------------------~~~~~ 217 (334)
T 1xj5_A 176 VNLVI---GDGVAFLKNAAEGSYDAVIVDSSDPIGP--AKEL---------------------------------FEKPF 217 (334)
T ss_dssp EEEEE---SCHHHHHHTSCTTCEEEEEECCCCTTSG--GGGG---------------------------------GSHHH
T ss_pred EEEEE---CCHHHHHHhccCCCccEEEECCCCccCc--chhh---------------------------------hHHHH
Confidence 2 333 3443322 3578999999966533310 1100 01356
Q ss_pred HHHHHHHhccCceEEEEe
Q 017747 206 LRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~ 223 (366)
++.-.+-|+|||+|++..
T Consensus 218 l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 218 FQSVARALRPGGVVCTQA 235 (334)
T ss_dssp HHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEec
Confidence 677789999999999973
No 180
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.35 E-value=0.0004 Score=62.52 Aligned_cols=102 Identities=12% Similarity=0.142 Sum_probs=59.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.+ .+. .|..+|+..|........+-+.+ . ..+. ..++
T Consensus 55 ~~~vLdiG~G~G~~~~~l--------a~~--------~~~~~v~~vD~~~~~~~~a~~~~-------~-~~~~--~~~v~ 108 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRM--------AQA--------LPEATIVSIERDERRYEEAHKHV-------K-ALGL--ESRIE 108 (233)
T ss_dssp CSEEEEECCTTSHHHHHH--------HHH--------CTTCEEEEECCCHHHHHHHHHHH-------H-HTTC--TTTEE
T ss_pred CCEEEEecCCCcHHHHHH--------HHH--------CCCCEEEEEECCHHHHHHHHHHH-------H-HcCC--CCcEE
Confidence 569999999999998753 222 12478999998643222221111 1 1111 1122
Q ss_pred EEeccCCCccccc---CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL---FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 130 f~~~vpgSFy~~l---fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+.. +++.+.+ ..++++|++++....+ ++..+|
T Consensus 109 ~~~---~d~~~~~~~~~~~~~fD~I~~~~~~~------------------------------------------~~~~~l 143 (233)
T 2gpy_A 109 LLF---GDALQLGEKLELYPLFDVLFIDAAKG------------------------------------------QYRRFF 143 (233)
T ss_dssp EEC---SCGGGSHHHHTTSCCEEEEEEEGGGS------------------------------------------CHHHHH
T ss_pred EEE---CCHHHHHHhcccCCCccEEEECCCHH------------------------------------------HHHHHH
Confidence 333 3543322 1267899999754422 233456
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||++++..
T Consensus 144 ~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 144 DMYSPMVRPGGLILSDN 160 (233)
T ss_dssp HHHGGGEEEEEEEEEET
T ss_pred HHHHHHcCCCeEEEEEc
Confidence 67788999999999974
No 181
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.34 E-value=0.00021 Score=61.28 Aligned_cols=35 Identities=14% Similarity=-0.030 Sum_probs=25.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..++.+ .++ +..+|+..|+...
T Consensus 31 ~~~~vLDlGcG~G~~~~~l--------~~~---------~~~~v~~vD~~~~ 65 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEA--------VSR---------GMSAAVLVEKNRK 65 (177)
T ss_dssp CSCEEEEETCTTCHHHHHH--------HHT---------TCCEEEEECCCHH
T ss_pred CCCeEEEeCCCCCHHHHHH--------HHc---------CCCEEEEEECCHH
Confidence 4579999999999998742 121 2268999998653
No 182
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.32 E-value=0.00049 Score=68.87 Aligned_cols=36 Identities=14% Similarity=0.097 Sum_probs=25.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..++.+.... +..+|+.-|+...
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~----------------g~~~V~GVDis~~ 277 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALEC----------------GCALSFGCEIMDD 277 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH----------------CCSEEEEEECCHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHC----------------CCCEEEEEeCCHH
Confidence 45799999999999987532221 1257889998654
No 183
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.31 E-value=0.001 Score=65.45 Aligned_cols=135 Identities=15% Similarity=0.205 Sum_probs=70.7
Q ss_pred hHHHhhHHHHHHHHHHH-HHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEe
Q 017747 17 SYARNSSLQKKASDTVK-HITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYL 95 (366)
Q Consensus 17 sY~~nS~~Q~~~~~~~~-~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~ 95 (366)
||+..+.-+.-+-+... ..-++||..-.. .-+.-+|+|+|||+|..|+.. .+. |. -+|+.
T Consensus 51 sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~--~~~~k~VLDvG~GtGiLs~~A--------a~a-----GA----~~V~a 111 (376)
T 4hc4_A 51 CYSDVSVHEEMIADRVRTDAYRLGILRNWA--ALRGKTVLDVGAGTGILSIFC--------AQA-----GA----RRVYA 111 (376)
T ss_dssp CHHHHHHHHHHHHCHHHHHHHHHHHHTTHH--HHTTCEEEEETCTTSHHHHHH--------HHT-----TC----SEEEE
T ss_pred hccCcHHHHHHhCCHHHHHHHHHHHHhCHH--hcCCCEEEEeCCCccHHHHHH--------HHh-----CC----CEEEE
Confidence 77777655443333221 122333321100 012357999999999888742 111 21 57899
Q ss_pred cCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCC
Q 017747 96 NDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGES 174 (366)
Q Consensus 96 nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~ 174 (366)
.|.. +... ..+ .....+|.. ..+ ++. |+. +.+-.++.+|+++|- |+... +..
T Consensus 112 ve~s-~~~~-~a~-------~~~~~n~~~--~~i~~i~---~~~-~~~~lpe~~DvivsE----~~~~~---l~~----- 164 (376)
T 4hc4_A 112 VEAS-AIWQ-QAR-------EVVRFNGLE--DRVHVLP---GPV-ETVELPEQVDAIVSE----WMGYG---LLH----- 164 (376)
T ss_dssp EECS-TTHH-HHH-------HHHHHTTCT--TTEEEEE---SCT-TTCCCSSCEEEEECC----CCBTT---BTT-----
T ss_pred EeCh-HHHH-HHH-------HHHHHcCCC--ceEEEEe---eee-eeecCCccccEEEee----ccccc---ccc-----
Confidence 9964 2222 111 111222321 223 333 344 445445789999994 33221 111
Q ss_pred CccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEE
Q 017747 175 INKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVL 221 (366)
Q Consensus 175 ~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl 221 (366)
+..+..+|.+|.+=|+|||+|+-
T Consensus 165 ------------------------e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 165 ------------------------ESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ------------------------TCSHHHHHHHHHHHEEEEEEEES
T ss_pred ------------------------cchhhhHHHHHHhhCCCCceECC
Confidence 12345678899999999999874
No 184
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.31 E-value=0.00079 Score=60.20 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=25.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..+..+.+.+ | |..+|+..|...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~------------~---~~~~v~~vD~s~ 108 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIV------------G---WEGKIFGIEFSP 108 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHH------------C---TTSEEEEEESCH
T ss_pred CCCEEEEEeccCCHHHHHHHHHh------------C---CCeEEEEEECCH
Confidence 35799999999999987543322 1 236788888764
No 185
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.30 E-value=0.00037 Score=64.65 Aligned_cols=76 Identities=12% Similarity=0.044 Sum_probs=43.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+.+.+ .|..+++..|+.......+-+.+. . .+. ..++
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~---------------~~~~~v~~vD~s~~~~~~a~~~~~-------~-~~~--~~~v 166 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAV---------------GSSGKVFAYEKREEFAKLAESNLT-------K-WGL--IERV 166 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHT---------------TTTCEEEEECCCHHHHHHHHHHHH-------H-TTC--GGGE
T ss_pred CCCEEEEECCcCCHHHHHHHHHh---------------CCCcEEEEEECCHHHHHHHHHHHH-------H-cCC--CCCE
Confidence 35799999999999987532221 234789999985432222221111 0 111 0122
Q ss_pred EEeccCCCcccccCCCCcccEEEc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
- .+.+++.+. +|++++|++++
T Consensus 167 ~--~~~~d~~~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 167 T--IKVRDISEG-FDEKDVDALFL 187 (277)
T ss_dssp E--EECCCGGGC-CSCCSEEEEEE
T ss_pred E--EEECCHHHc-ccCCccCEEEE
Confidence 1 223566444 78889999997
No 186
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.30 E-value=0.00037 Score=61.76 Aligned_cols=77 Identities=10% Similarity=0.044 Sum_probs=44.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..++.++ .+ + . .+|+..|+.......+-+.+. . .+ ..++
T Consensus 55 ~~~vLDlgcG~G~~~~~l~--------~~-----~---~-~~V~~vD~s~~~l~~a~~~~~-------~-~~---~~~v~ 106 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEAL--------SR-----Y---A-AGATLIEMDRAVSQQLIKNLA-------T-LK---AGNAR 106 (202)
T ss_dssp TCEEEETTCTTCHHHHHHH--------HT-----T---C-SEEEEECSCHHHHHHHHHHHH-------H-TT---CCSEE
T ss_pred CCeEEEeCCCcCHHHHHHH--------hc-----C---C-CEEEEEECCHHHHHHHHHHHH-------H-cC---CCcEE
Confidence 4789999999999987421 11 1 1 478999986543333322111 1 11 1122
Q ss_pred EEeccCCCccccc-CCCCcccEEEcccccc
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSNSLH 158 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~alh 158 (366)
|+. +++.+-+ .+++++|++++...+|
T Consensus 107 ~~~---~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 107 VVN---SNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp EEC---SCHHHHHSSCCCCEEEEEECCSSS
T ss_pred EEE---CCHHHHHhhcCCCCCEEEECCCCC
Confidence 333 4554433 3567899999865544
No 187
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.29 E-value=0.00033 Score=63.62 Aligned_cols=76 Identities=11% Similarity=0.077 Sum_probs=44.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..+..+...+ .|..+++..|+.......+-+.+ ....|. .++
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~---------------~~~~~v~~~D~~~~~~~~a~~~~-------~~~~g~---~~v 150 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAV---------------GEKGLVESYEARPHHLAQAERNV-------RAFWQV---ENV 150 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH---------------CTTSEEEEEESCHHHHHHHHHHH-------HHHCCC---CCE
T ss_pred CCCEEEEECCCcCHHHHHHHHHh---------------CCCCEEEEEeCCHHHHHHHHHHH-------HHhcCC---CCE
Confidence 45799999999999987543322 23368899998543222222111 111011 122
Q ss_pred -EEeccCCCcccccCCCCcccEEEc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
+.. +++.+.-+|++++|++++
T Consensus 151 ~~~~---~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 151 RFHL---GKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp EEEE---SCGGGCCCCTTCEEEEEE
T ss_pred EEEE---CchhhcCCCCCCcCEEEE
Confidence 333 466544478889999997
No 188
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.28 E-value=0.0001 Score=63.26 Aligned_cols=101 Identities=21% Similarity=0.260 Sum_probs=59.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. . .+++..|........+-+.+ .. .+. ..++
T Consensus 33 ~~~~vldiG~G~G~~~~~l--------~~~--------~--~~v~~~D~~~~~~~~a~~~~-------~~-~~~--~~~~ 84 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLEL--------AGR--------V--RRVYAIDRNPEAISTTEMNL-------QR-HGL--GDNV 84 (192)
T ss_dssp TTCEEEEESCTTSHHHHHH--------HTT--------S--SEEEEEESCHHHHHHHHHHH-------HH-TTC--CTTE
T ss_pred CCCEEEEECCCCCHHHHHH--------HHh--------c--CEEEEEECCHHHHHHHHHHH-------HH-cCC--Ccce
Confidence 4579999999999988642 111 1 67888887543222221111 11 111 0222
Q ss_pred -EEeccCCCcccccCCC-CcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLFPN-NSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~-~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+.. +++.+ .+|. +++|+++++..+|++ ..+|+
T Consensus 85 ~~~~---~d~~~-~~~~~~~~D~v~~~~~~~~~------------------------------------------~~~l~ 118 (192)
T 1l3i_A 85 TLME---GDAPE-ALCKIPDIDIAVVGGSGGEL------------------------------------------QEILR 118 (192)
T ss_dssp EEEE---SCHHH-HHTTSCCEEEEEESCCTTCH------------------------------------------HHHHH
T ss_pred EEEe---cCHHH-hcccCCCCCEEEECCchHHH------------------------------------------HHHHH
Confidence 233 35544 3344 689999987654321 23456
Q ss_pred HHHHHhccCceEEEEee
Q 017747 208 SRSEELVVGGRMVLILL 224 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~~ 224 (366)
.-.+-|+|||++++...
T Consensus 119 ~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 119 IIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp HHHHTEEEEEEEEEEEC
T ss_pred HHHHhcCCCcEEEEEec
Confidence 66889999999999864
No 189
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.28 E-value=0.00087 Score=61.37 Aligned_cols=38 Identities=16% Similarity=0.238 Sum_probs=27.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCc
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTND 102 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ND 102 (366)
++.+|+|+|||+|..|+.+ .+. -++..+|+..|+....
T Consensus 60 ~~~~VLDiG~G~G~~t~~l--------a~~-------~~~~~~v~~iD~~~~~ 97 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAM--------SLA-------LPDDGQVITCDINEGW 97 (242)
T ss_dssp TCSEEEEEESCCSHHHHHH--------HHT-------SCTTCEEEEEECCCSS
T ss_pred CcCEEEEeeCCcCHHHHHH--------HHh-------CCCCCEEEEEECCHHH
Confidence 3579999999999999853 221 1234789999987653
No 190
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.27 E-value=0.00069 Score=64.27 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=60.7
Q ss_pred CceEEEeecCCCCcch--HHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 50 KTINIADLGCSSGPNT--LAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns--~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
...+|+|+|||+|.+. =. .+ +.++ -++..+|+..|+... ++ +
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs---~~---~a~~-------~~~~~~V~gvDis~~--------v~---------------~ 106 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT---AV---LRQW-------LPTGTLLVDSDLNDF--------VS---------------D 106 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH---HH---HHHH-------SCTTCEEEEEESSCC--------BC---------------S
T ss_pred CCCEEEEeCCCCCCCCCcHH---HH---HHHH-------cCCCCEEEEEECCCC--------CC---------------C
Confidence 4579999999885543 10 11 2222 122478999999653 11 0
Q ss_pred ceE-EeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SVY-IAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~f-~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
-.| +. |+..+..+ ++++|+++|+.+.+|...... + + ... ...+...|
T Consensus 107 v~~~i~---gD~~~~~~-~~~fD~Vvsn~~~~~~g~~~~---d------~--------~~~-----------~~l~~~~l 154 (290)
T 2xyq_A 107 ADSTLI---GDCATVHT-ANKWDLIISDMYDPRTKHVTK---E------N--------DSK-----------EGFFTYLC 154 (290)
T ss_dssp SSEEEE---SCGGGCCC-SSCEEEEEECCCCCC---CCS---C------C--------CCC-----------CTHHHHHH
T ss_pred CEEEEE---CccccCCc-cCcccEEEEcCCccccccccc---c------c--------cch-----------HHHHHHHH
Confidence 113 33 45543223 478999999876555211100 0 0 000 01234566
Q ss_pred HHHHHHhccCceEEEEeecC
Q 017747 207 RSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g~ 226 (366)
+.-.+-|+|||+|++..+..
T Consensus 155 ~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 155 GFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp HHHHHHEEEEEEEEEEECSS
T ss_pred HHHHHhcCCCcEEEEEEecc
Confidence 77789999999999976543
No 191
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.25 E-value=0.00036 Score=64.36 Aligned_cols=101 Identities=18% Similarity=0.168 Sum_probs=60.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +... .|..+|+..|........+-+.. ...+ ..++
T Consensus 80 ~~~~vLDiG~G~G~~~i~--------la~~--------~~~~~v~~vD~s~~~~~~a~~~~--------~~~~---l~~v 132 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLP--------LKIV--------RPELELVLVDATRKKVAFVERAI--------EVLG---LKGA 132 (249)
T ss_dssp SSCEEEEETCTTTTTHHH--------HHHH--------CTTCEEEEEESCHHHHHHHHHHH--------HHHT---CSSE
T ss_pred CCCEEEEEcCCCCHHHHH--------HHHH--------CCCCEEEEEECCHHHHHHHHHHH--------HHhC---CCce
Confidence 457999999999999875 2222 24588999998653222221111 1112 2233
Q ss_pred -EEeccCCCcccccC---CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLF---PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 -f~~~vpgSFy~~lf---p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++. ++..+-.. +++++|+++|.... |+..+
T Consensus 133 ~~~~---~d~~~~~~~~~~~~~fD~I~s~a~~-------------------------------------------~~~~l 166 (249)
T 3g89_A 133 RALW---GRAEVLAREAGHREAYARAVARAVA-------------------------------------------PLCVL 166 (249)
T ss_dssp EEEE---CCHHHHTTSTTTTTCEEEEEEESSC-------------------------------------------CHHHH
T ss_pred EEEE---CcHHHhhcccccCCCceEEEECCcC-------------------------------------------CHHHH
Confidence 333 45533222 24899999984210 23345
Q ss_pred HHHHHHHhccCceEEEEe
Q 017747 206 LRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~ 223 (366)
+..-.+-|+|||++++..
T Consensus 167 l~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 167 SELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp HHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEe
Confidence 667788999999998765
No 192
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.25 E-value=0.00059 Score=63.88 Aligned_cols=114 Identities=15% Similarity=0.091 Sum_probs=66.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+.. +.+ ..+..+|...|+-..-....-+.++.+.. +.. .++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~--------l~~--------~~~~~~v~~vEid~~~v~~ar~~~~~~~~------~~~-~~r 130 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIRE--------ILK--------HPSVKKATLVDIDGKVIEYSKKFLPSIAG------KLD-DPR 130 (275)
T ss_dssp SSCCEEEEESCTTCHHHHH--------HTT--------CTTCSEEEEEESCHHHHHHHHHHCHHHHT------TTT-STT
T ss_pred CCCCEEEEECCchHHHHHH--------HHh--------CCCCceEEEEECCHHHHHHHHHHhHhhcc------ccC-CCc
Confidence 4678999999999998764 211 12347889999865433333333332110 000 122
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++.+ +..+-+ .+++++|++++....+|. .+..+.. ..|+
T Consensus 131 v~v~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~--~~~~l~~---------------------------------~~~~ 172 (275)
T 1iy9_A 131 VDVQVD---DGFMHIAKSENQYDVIMVDSTEPVG--PAVNLFT---------------------------------KGFY 172 (275)
T ss_dssp EEEEES---CSHHHHHTCCSCEEEEEESCSSCCS--CCCCCST---------------------------------THHH
T ss_pred eEEEEC---cHHHHHhhCCCCeeEEEECCCCCCC--cchhhhH---------------------------------HHHH
Confidence 2 3333 433322 246889999997766652 1222211 1355
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||+|++..
T Consensus 173 ~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 173 AGIAKALKEDGIFVAQT 189 (275)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHhcCCCcEEEEEc
Confidence 66678999999999985
No 193
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.24 E-value=0.00025 Score=64.24 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=59.5
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-E
Q 017747 52 INIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV-Y 130 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~-f 130 (366)
.+|+|+|||+|..|+.+ .+.. ++..+|+..|+.......+-+.+. ..|.. ..++ +
T Consensus 58 ~~vLdiG~G~G~~~~~l--------a~~~-------~~~~~v~~vD~~~~~~~~a~~~~~--------~~g~~-~~~i~~ 113 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYI--------LNGL-------ADNTTLTCIDPESEHQRQAKALFR--------EAGYS-PSRVRF 113 (221)
T ss_dssp CEEEEESTTHHHHHHHH--------HHHS-------CTTSEEEEECSCHHHHHHHHHHHH--------HTTCC-GGGEEE
T ss_pred CCEEEEcCCchHHHHHH--------HHhC-------CCCCEEEEEECCHHHHHHHHHHHH--------HcCCC-cCcEEE
Confidence 48999999999999853 2221 234789999986543222221111 11110 0123 3
Q ss_pred EeccCCCccccc--CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL--FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 131 ~~~vpgSFy~~l--fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+. |+..+-+ ++++++|++|+... . .++..||+.
T Consensus 114 ~~---gda~~~l~~~~~~~fD~V~~d~~--------~----------------------------------~~~~~~l~~ 148 (221)
T 3dr5_A 114 LL---SRPLDVMSRLANDSYQLVFGQVS--------P----------------------------------MDLKALVDA 148 (221)
T ss_dssp EC---SCHHHHGGGSCTTCEEEEEECCC--------T----------------------------------TTHHHHHHH
T ss_pred EE---cCHHHHHHHhcCCCcCeEEEcCc--------H----------------------------------HHHHHHHHH
Confidence 33 4554433 34789999986421 0 012235566
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
-.+-|+|||++++..
T Consensus 149 ~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 149 AWPLLRRGGALVLAD 163 (221)
T ss_dssp HHHHEEEEEEEEETT
T ss_pred HHHHcCCCcEEEEeC
Confidence 678999999999853
No 194
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.21 E-value=0.00052 Score=65.35 Aligned_cols=116 Identities=11% Similarity=0.032 Sum_probs=65.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+..+ .+ ..+..+++..|+........-+.++.+...+. .++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~-------~~r 150 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREV--------VK--------HPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS-------SSK 150 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHH--------TT--------CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG-------CTT
T ss_pred CCCCEEEEECCCchHHHHHH--------HH--------cCCCCEEEEEECCHHHHHHHHHHhHHhhcccC-------CCc
Confidence 45689999999999988642 11 12347899999865433333333332111110 122
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++. ++..+-+ .+++++|++++....+|- |... -....|+
T Consensus 151 v~v~~---~Da~~~l~~~~~~fD~Ii~d~~~~~~---~~~~--------------------------------l~~~~~l 192 (304)
T 2o07_A 151 LTLHV---GDGFEFMKQNQDAFDVIITDSSDPMG---PAES--------------------------------LFKESYY 192 (304)
T ss_dssp EEEEE---SCHHHHHHTCSSCEEEEEEECC----------------------------------------------CHHH
T ss_pred EEEEE---CcHHHHHhhCCCCceEEEECCCCCCC---cchh--------------------------------hhHHHHH
Confidence 2 333 3443322 356889999997655541 1100 0113466
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+.-.+-|+|||+|++....
T Consensus 193 ~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 193 QLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp HHHHHHEEEEEEEEEEEEC
T ss_pred HHHHhccCCCeEEEEecCC
Confidence 7778999999999998643
No 195
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.21 E-value=0.00068 Score=68.69 Aligned_cols=128 Identities=16% Similarity=0.101 Sum_probs=72.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+...+ .+.-+|+.+|+.......+-+.+. . .| ..++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~---------------~~~g~V~avDis~~~l~~~~~n~~-------r-~g---~~nv 170 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARM---------------NNEGAILANEFSASRVKVLHANIS-------R-CG---ISNV 170 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHT---------------TTCSEEEEECSSHHHHHHHHHHHH-------H-HT---CCSE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC---------------CCCCEEEEEECCHHHHHHHHHHHH-------H-cC---CCcE
Confidence 35799999999999998633221 123789999997654433332221 1 12 1233
Q ss_pred -EEeccCCCcccccC-CCCcccEEEc---ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLF-PNNSLHFIHS---SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 130 -f~~~vpgSFy~~lf-p~~s~~~~~S---~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
++.+ +...-.. +++++|.+++ ++...-+.+.|..... .++.. .....+.-..
T Consensus 171 ~~~~~---D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~---------------~~~~~-----~~~l~~~q~~ 227 (479)
T 2frx_A 171 ALTHF---DGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKN---------------WSPES-----NQEIAATQRE 227 (479)
T ss_dssp EEECC---CSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSS---------------CCHHH-----HHHHHHHHHH
T ss_pred EEEeC---CHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhh---------------cCHhH-----HHHHHHHHHH
Confidence 3333 3322111 4678999997 3444444444543211 11111 1222333456
Q ss_pred HHHHHHHHhccCceEEEEeecC
Q 017747 205 FLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
+|..-.+-|+|||+||.+++..
T Consensus 228 iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 228 LIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp HHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHhcCCCCEEEEecccC
Confidence 7888889999999999987644
No 196
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.20 E-value=0.00086 Score=63.01 Aligned_cols=112 Identities=13% Similarity=-0.041 Sum_probs=61.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ .+ . -+|+..|+.. +-..+ +..+ ... ...+ .+-.
T Consensus 82 ~g~~VLDlGcGtG~~s~~l--------a~---------~--~~V~gVD~s~-m~~~a-~~~~-----~~~-~~~~-~~v~ 133 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYA--------AS---------Q--PNVREVKAYT-LGTSG-HEKP-----RLV-ETFG-WNLI 133 (276)
T ss_dssp CCEEEEEESCTTCHHHHHH--------HT---------S--TTEEEEEEEC-CCCTT-SCCC-----CCC-CCTT-GGGE
T ss_pred CCCEEEEeccCCCHHHHHH--------HH---------c--CCEEEEECch-hhhhh-hhch-----hhh-hhcC-CCeE
Confidence 3579999999999988642 11 1 4677777754 21100 0000 000 0000 0123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+.. -+++.. +|++++|+++|..+ ++... | ..+ .+. .+ ..|..-
T Consensus 134 ~~~~-~~D~~~--l~~~~fD~Vvsd~~-~~~~~-~--~~d-----------------------~~~-----~l-~~L~~~ 177 (276)
T 2wa2_A 134 TFKS-KVDVTK--MEPFQADTVLCDIG-ESNPT-A--AVE-----------------------ASR-----TL-TVLNVI 177 (276)
T ss_dssp EEEC-SCCGGG--CCCCCCSEEEECCC-CCCSC-H--HHH-----------------------HHH-----HH-HHHHHH
T ss_pred EEec-cCcHhh--CCCCCcCEEEECCC-cCCCc-h--hhh-----------------------HHH-----HH-HHHHHH
Confidence 4410 245544 57889999999887 55221 1 111 000 01 156677
Q ss_pred HHHhccCc--eEEEEeec
Q 017747 210 SEELVVGG--RMVLILLG 225 (366)
Q Consensus 210 a~EL~~GG--~lvl~~~g 225 (366)
.+-|+||| .|++..+.
T Consensus 178 ~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 178 SRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp HHHHHHSTTCEEEEEESC
T ss_pred HHHhccCCCcEEEEEeCC
Confidence 78899999 99997766
No 197
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.18 E-value=0.00066 Score=61.90 Aligned_cols=122 Identities=21% Similarity=0.263 Sum_probs=64.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCC--CCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGG--GSSP 127 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~--~~~~ 127 (366)
+..+|+|+|||+|..++. +.+. .|..+|+..|........+-+.+.. ....... + ..
T Consensus 49 ~~~~vLDiGcG~G~~~~~--------la~~--------~~~~~v~gvD~s~~~l~~a~~~~~~----~~~~~~~~~~-~~ 107 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMID--------LSPA--------FPEDLILGMEIRVQVTNYVEDRIIA----LRNNTASKHG-FQ 107 (246)
T ss_dssp CCEEEEEETCTTSHHHHH--------HHHH--------STTSEEEEEESCHHHHHHHHHHHHH----HHHTC-CCST-TT
T ss_pred CCCEEEEEcCCCCHHHHH--------HHHh--------CCCCCEEEEEcCHHHHHHHHHHHHH----HhhccccccC-CC
Confidence 457899999999999875 2222 2447899999865433222221110 0000000 0 22
Q ss_pred ce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++ ++.+-...+....++.+++|.++....-.|....- .+.++ + -..||
T Consensus 108 nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~-----------~~~r~---------~-----------~~~~l 156 (246)
T 2vdv_E 108 NINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRK-----------HKARI---------I-----------TNTLL 156 (246)
T ss_dssp TEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC-----------------CSSC---------C-----------CHHHH
T ss_pred cEEEEeccHHHHHHHhccccccCEEEEECCCcccccch-----------hHHhh---------c-----------cHHHH
Confidence 33 44443333344568899999998443222211000 00000 0 02456
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
..-++-|+|||+|++.+
T Consensus 157 ~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 157 SEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHcCCCCEEEEEe
Confidence 77789999999999964
No 198
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.18 E-value=0.00064 Score=63.86 Aligned_cols=115 Identities=13% Similarity=0.013 Sum_probs=65.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+++.+|+|+|||+|..+..+ .+ ..|..+++..|+........-+.++.+...+. .++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~-------~~~ 133 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIREL--------CK--------YKSVENIDICEIDETVIEVSKIYFKNISCGYE-------DKR 133 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHH--------TT--------CTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG-------STT
T ss_pred CCCCeEEEEeCCcCHHHHHH--------HH--------cCCCCEEEEEECCHHHHHHHHHHhHHhccccC-------CCc
Confidence 45789999999999988642 11 12347899999865333333333332110000 122
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++.+ +..+-+ ..++++|++++....+|.. +..+.. ..|+
T Consensus 134 v~~~~~---D~~~~l~~~~~~fD~Ii~d~~~~~~~--~~~l~~---------------------------------~~~l 175 (283)
T 2i7c_A 134 VNVFIE---DASKFLENVTNTYDVIIVDSSDPIGP--AETLFN---------------------------------QNFY 175 (283)
T ss_dssp EEEEES---CHHHHHHHCCSCEEEEEEECCCTTTG--GGGGSS---------------------------------HHHH
T ss_pred EEEEEC---ChHHHHHhCCCCceEEEEcCCCCCCc--chhhhH---------------------------------HHHH
Confidence 2 3333 333222 1367899999876555421 111100 3567
Q ss_pred HHHHHHhccCceEEEEee
Q 017747 207 RSRSEELVVGGRMVLILL 224 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~ 224 (366)
+.-.+-|+|||+|++...
T Consensus 176 ~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 176 EKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp HHHHHHEEEEEEEEEECC
T ss_pred HHHHHhcCCCcEEEEECC
Confidence 778899999999998853
No 199
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.15 E-value=0.00088 Score=62.54 Aligned_cols=112 Identities=16% Similarity=0.039 Sum_probs=60.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+. + . -+|+..|+.. +-..+ +..+.. ....+ .+-.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la--------~---------~--~~V~gvD~s~-m~~~a-~~~~~~----~~~~~---~~v~ 125 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAA--------S---------R--PHVMDVRAYT-LGVGG-HEVPRI----TESYG---WNIV 125 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHH--------T---------S--TTEEEEEEEC-CCCSS-CCCCCC----CCBTT---GGGE
T ss_pred CCCEEEEeCcCCCHHHHHHH--------H---------c--CcEEEEECch-hhhhh-hhhhhh----hhccC---CCeE
Confidence 35799999999999886421 1 1 4577777744 21000 000000 00000 0123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+.. -+++.. +|++++|+++|..+ +.... | ..+ .. +.+ ..|...
T Consensus 126 ~~~~-~~D~~~--l~~~~fD~V~sd~~-~~~~~-~--~~d-----------------------~~-----~~l-~~L~~~ 169 (265)
T 2oxt_A 126 KFKS-RVDIHT--LPVERTDVIMCDVG-ESSPK-W--SVE-----------------------SE-----RTI-KILELL 169 (265)
T ss_dssp EEEC-SCCTTT--SCCCCCSEEEECCC-CCCSC-H--HHH-----------------------HH-----HHH-HHHHHH
T ss_pred EEec-ccCHhH--CCCCCCcEEEEeCc-ccCCc-c--chh-----------------------HH-----HHH-HHHHHH
Confidence 4411 245544 57889999999877 55221 1 111 00 001 156677
Q ss_pred HHHhccCc--eEEEEeec
Q 017747 210 SEELVVGG--RMVLILLG 225 (366)
Q Consensus 210 a~EL~~GG--~lvl~~~g 225 (366)
.+-|+||| .+++..+.
T Consensus 170 ~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 170 EKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp HHHHHHCTTCEEEEEESC
T ss_pred HHHhccCCCeEEEEEeCC
Confidence 78999999 99997766
No 200
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.15 E-value=0.00044 Score=61.62 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=26.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
.+.+|+|+|||+|..++.+ .+. -++..+|+..|+...
T Consensus 58 ~~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~~~~ 94 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWL--------ARG-------LSSGGRVVTLEASEK 94 (223)
T ss_dssp TCSEEEEECCTTSHHHHHH--------HTT-------CCSSCEEEEEESCHH
T ss_pred CCCEEEEecCCccHHHHHH--------HHh-------CCCCCEEEEEECCHH
Confidence 3579999999999998752 221 122578999998653
No 201
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.08 E-value=0.00039 Score=69.16 Aligned_cols=126 Identities=17% Similarity=0.151 Sum_probs=73.5
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..|..+ .+. .+..+|+.+|........+-+.+. . .| ....+
T Consensus 247 g~~VLDlgaG~G~~t~~l--------a~~--------~~~~~v~a~D~~~~~l~~~~~~~~-------~-~g---~~~~~ 299 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHI--------LEV--------APEAQVVAVDIDEQRLSRVYDNLK-------R-LG---MKATV 299 (429)
T ss_dssp TCEEEEESCTTCHHHHHH--------HHH--------CTTCEEEEEESSTTTHHHHHHHHH-------H-TT---CCCEE
T ss_pred cCeEEEECCCchHHHHHH--------HHH--------cCCCEEEEECCCHHHHHHHHHHHH-------H-cC---CCeEE
Confidence 479999999999999853 222 122789999997765544433221 1 11 11223
Q ss_pred EeccCCCccccc--CCCCcccEEEc---ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL--FPNNSLHFIHS---SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 131 ~~~vpgSFy~~l--fp~~s~~~~~S---~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+. +++..-. ++++++|.+++ ++....+.+.|..... .++..+ ....+....+
T Consensus 300 ~~---~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~---------------~~~~~~-----~~l~~~q~~~ 356 (429)
T 1sqg_A 300 KQ---GDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL---------------RRDRDI-----PELAQLQSEI 356 (429)
T ss_dssp EE---CCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHH---------------CCTTHH-----HHHHHHHHHH
T ss_pred Ee---CchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhc---------------CCHHHH-----HHHHHHHHHH
Confidence 33 3443222 56789999986 3444444454442111 011111 2233344677
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|..-.+-|+|||+|+++.+..
T Consensus 357 L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 357 LDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp HHHHGGGEEEEEEEEEEESCC
T ss_pred HHHHHHhcCCCCEEEEEECCC
Confidence 888889999999999987544
No 202
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.08 E-value=0.00086 Score=64.27 Aligned_cols=114 Identities=12% Similarity=-0.005 Sum_probs=65.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+..+ .+ ..|..+++..|+........-+.++.+...+. .++
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l--------~~--------~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~-------~~~ 171 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIREL--------CK--------YKSVENIDICEIDETVIEVSKIYFKNISCGYE-------DKR 171 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHH--------TT--------CTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG-------STT
T ss_pred CCCCEEEEEcCCccHHHHHH--------HH--------cCCCCEEEEEECCHHHHHHHHHHHHhhccccC-------CCc
Confidence 45689999999999988642 11 12447899999865433333333332100000 112
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++. ++..+-+ .+++++|++++...-+|- .+..+ | -..|+
T Consensus 172 v~~~~---~D~~~~l~~~~~~fDvIi~d~~~p~~--~~~~l--------------------------~-------~~~~l 213 (321)
T 2pt6_A 172 VNVFI---EDASKFLENVTNTYDVIIVDSSDPIG--PAETL--------------------------F-------NQNFY 213 (321)
T ss_dssp EEEEE---SCHHHHHHHCCSCEEEEEEECCCSSS--GGGGG--------------------------S-------SHHHH
T ss_pred EEEEE---ccHHHHHhhcCCCceEEEECCcCCCC--cchhh--------------------------h-------HHHHH
Confidence 2 333 3443322 246789999987543330 00000 0 03566
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||++++..
T Consensus 214 ~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 214 EKIYNALKPNGYCVAQC 230 (321)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEc
Confidence 77789999999999985
No 203
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.08 E-value=0.0011 Score=63.87 Aligned_cols=116 Identities=18% Similarity=0.109 Sum_probs=68.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+.... .|..+++..|+.......+-+.+. ..|. ..-.
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~---------------~~~~~v~g~Di~~~~i~~a~~n~~--------~~g~--~~i~ 257 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTL---------------GPTSPVYAGDLDEKRLGLAREAAL--------ASGL--SWIR 257 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHH---------------CTTSCEEEEESCHHHHHHHHHHHH--------HTTC--TTCE
T ss_pred CCCEEEeCCCCcCHHHHHHHHhh---------------CCCceEEEEECCHHHHHHHHHHHH--------HcCC--CceE
Confidence 35789999999999887532211 134789999986533222221111 1111 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|.. +++.+-..|.+++|+++++--.+|... .. .........+++.-
T Consensus 258 ~~~---~D~~~~~~~~~~~D~Ii~npPyg~r~~-----------------------~~--------~~~~~~~~~~~~~~ 303 (354)
T 3tma_A 258 FLR---ADARHLPRFFPEVDRILANPPHGLRLG-----------------------RK--------EGLFHLYWDFLRGA 303 (354)
T ss_dssp EEE---CCGGGGGGTCCCCSEEEECCCSCC---------------------------C--------HHHHHHHHHHHHHH
T ss_pred EEe---CChhhCccccCCCCEEEECCCCcCccC-----------------------Cc--------ccHHHHHHHHHHHH
Confidence 333 466555566778899998754443110 00 11234556788888
Q ss_pred HHHhccCceEEEEee
Q 017747 210 SEELVVGGRMVLILL 224 (366)
Q Consensus 210 a~EL~~GG~lvl~~~ 224 (366)
.+-|+|||++++...
T Consensus 304 ~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 304 LALLPPGGRVALLTL 318 (354)
T ss_dssp HHTSCTTCEEEEEES
T ss_pred HHhcCCCcEEEEEeC
Confidence 899999999999863
No 204
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.07 E-value=0.0008 Score=64.39 Aligned_cols=114 Identities=13% Similarity=0.113 Sum_probs=62.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+..+ .+ ..|..+++..|+........-+.++.....+ . .++
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l--------~~--------~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~------~-~~r 163 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREV--------LK--------HESVEKVTMCEIDEMVIDVAKKFLPGMSCGF------S-HPK 163 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHH--------TT--------CTTCCEEEEECSCHHHHHHHHHHCTTTSGGG------G-CTT
T ss_pred CCCCEEEEEcCCcCHHHHHH--------HH--------cCCCCEEEEEECCHHHHHHHHHHHHHhcccc------C-CCC
Confidence 45689999999999988642 11 1344789999986543333333332110000 0 122
Q ss_pred e-EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 129 ~-f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
+ ++. ++..+-+ .+++++|++++...-||- |. ...|. ..|+
T Consensus 164 v~~~~---~D~~~~l~~~~~~fD~Ii~d~~~~~~---~~-------------------------~~l~t-------~~~l 205 (314)
T 2b2c_A 164 LDLFC---GDGFEFLKNHKNEFDVIITDSSDPVG---PA-------------------------ESLFG-------QSYY 205 (314)
T ss_dssp EEEEC---SCHHHHHHHCTTCEEEEEECCC------------------------------------------------HH
T ss_pred EEEEE---ChHHHHHHhcCCCceEEEEcCCCCCC---cc-------------------------hhhhH-------HHHH
Confidence 2 333 3443322 257889999986543331 10 00000 4567
Q ss_pred HHHHHHhccCceEEEEe
Q 017747 207 RSRSEELVVGGRMVLIL 223 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~ 223 (366)
+.-.+-|+|||+|++..
T Consensus 206 ~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 206 ELLRDALKEDGILSSQG 222 (314)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHhhcCCCeEEEEEC
Confidence 77789999999999986
No 205
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.06 E-value=0.00097 Score=64.39 Aligned_cols=77 Identities=16% Similarity=0.123 Sum_probs=42.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+ .+. +..+|+..|+.. ....+-+ .. +..+. ..++
T Consensus 50 ~~~~VLDiGcGtG~ls~~l--------a~~---------g~~~V~~vD~s~-~~~~a~~-------~~-~~~~l--~~~v 101 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFA--------AQA---------GARKIYAVEAST-MAQHAEV-------LV-KSNNL--TDRI 101 (348)
T ss_dssp TTCEEEEETCTTSHHHHHH--------HHT---------TCSEEEEEECST-HHHHHHH-------HH-HHTTC--TTTE
T ss_pred CcCEEEEcCCCccHHHHHH--------HhC---------CCCEEEEECCHH-HHHHHHH-------HH-HHcCC--CCcE
Confidence 4579999999999988642 121 225899999852 2211111 11 11121 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLH 158 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alh 158 (366)
++. +++. .+-+++++|+++|...++
T Consensus 102 ~~~~---~d~~-~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 102 VVIP---GKVE-EVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp EEEE---SCTT-TCCCSSCEEEEEECCCBT
T ss_pred EEEE---cchh-hCCCCCceeEEEEeCchh
Confidence 233 4553 333347899999986644
No 206
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.05 E-value=0.0003 Score=65.62 Aligned_cols=124 Identities=10% Similarity=-0.014 Sum_probs=66.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ .+.. ....+|+..|+.......+-+.+. . .| ..++
T Consensus 83 ~g~~VLDlgaG~G~~t~~l--------a~~~-------~~~~~v~avD~~~~~l~~~~~~~~-------~-~g---~~~v 136 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHL--------AQLM-------KNKGTIVAVEISKTRTKALKSNIN-------R-MG---VLNT 136 (274)
T ss_dssp TTCEEEETTCTTCHHHHHH--------HHHT-------TTCSEEEEEESCHHHHHHHHHHHH-------H-TT---CCSE
T ss_pred CcCEEEEeCCCccHHHHHH--------HHHc-------CCCCEEEEECCCHHHHHHHHHHHH-------H-hC---CCcE
Confidence 3479999999999999753 2221 112789999986543332222111 1 11 1122
Q ss_pred -EEeccCCCcccccC----CCCcccEEEccc---ccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRLF----PNNSLHFIHSSN---SLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQED 201 (366)
Q Consensus 130 -f~~~vpgSFy~~lf----p~~s~~~~~S~~---alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D 201 (366)
++. +++.+-.. +.+++|.+++.. .+..+.+.|. | ...-.....++
T Consensus 137 ~~~~---~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~---------~---------------~~~~~~~~~~~ 189 (274)
T 3ajd_A 137 IIIN---ADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRN---------V---------------SEEDIKYCSLR 189 (274)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEEEECCC------------------------------------HHHHTGGGTC
T ss_pred EEEe---CChHhcchhhhhccccCCEEEEcCCCCCCcccccCCC---------C---------------CHHHHHHHHHH
Confidence 333 34432222 367899998742 2222222220 0 01111122345
Q ss_pred HHHHHHHHHHHhccCceEEEEeecC
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
...+|+.-.+-|+|||+|+++....
T Consensus 190 ~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 190 QKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEECCC
Confidence 5778888899999999999987654
No 207
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.03 E-value=0.00096 Score=59.38 Aligned_cols=37 Identities=14% Similarity=0.272 Sum_probs=26.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
.+.+|+|+|||+|..|+.+ .+. -++..+|+..|+...
T Consensus 64 ~~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~~~~ 100 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAM--------GLA-------LPKDGTLITCDVDEK 100 (225)
T ss_dssp TCSEEEEECCTTSHHHHHH--------HTT-------CCTTCEEEEEESCHH
T ss_pred CCCEEEEeCCcchHHHHHH--------HHh-------CCCCCEEEEEeCCHH
Confidence 3579999999999998753 221 122588999998653
No 208
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.01 E-value=0.0012 Score=62.98 Aligned_cols=22 Identities=14% Similarity=0.083 Sum_probs=17.2
Q ss_pred HHHHHHHHhccCceEEEEeecC
Q 017747 205 FLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
.|..-.+-|+|||.|++.++..
T Consensus 173 ~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 173 VLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp HHHHHHHHCCTTCEEEEEESCC
T ss_pred HHHHHHHHhCCCCEEEEEeCCC
Confidence 5566678999999999976544
No 209
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.01 E-value=0.0024 Score=57.72 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=25.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..+..+. +.. ++..+|+..|...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la--------~~~-------~~~~~v~~vD~~~ 95 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFA--------SAL-------PEDGKILCCDVSE 95 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHH--------HHS-------CTTCEEEEEESCH
T ss_pred CcCEEEEEeCCCCHHHHHHH--------HhC-------CCCCEEEEEECCH
Confidence 35799999999999997532 221 1236888888754
No 210
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.99 E-value=0.00035 Score=70.53 Aligned_cols=128 Identities=16% Similarity=0.107 Sum_probs=71.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|+.+. +.. ....+|+.+|+.......+-+.+. . .| ..-.
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA--------~~~-------~~~g~V~AvDis~~~l~~a~~n~~-------r-~G---~~v~ 154 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLA--------ARM-------GGKGLLLANEVDGKRVRGLLENVE-------R-WG---APLA 154 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHH--------HHT-------TTCSEEEEECSCHHHHHHHHHHHH-------H-HC---CCCE
T ss_pred CCCEEEEEcCCcCHHHHHHH--------HhC-------CCCCEEEEEECCHHHHHHHHHHHH-------H-cC---CeEE
Confidence 35799999999999998632 221 123689999987544333322221 1 12 1222
Q ss_pred EEeccCCCccccc-CCCCcccEEEc---ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHS---SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S---~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
++. ++..+-. ++++++|.+++ ++..--+.+.|..... .++..+ ....+.-..+
T Consensus 155 ~~~---~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~---------------~~~~~~-----~~l~~~Q~~i 211 (464)
T 3m6w_A 155 VTQ---APPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARH---------------WGPSAP-----KRMAEVQKAL 211 (464)
T ss_dssp EEC---SCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGG---------------CCTTHH-----HHHHHHHHHH
T ss_pred EEE---CCHHHhhhhccccCCEEEECCCcCCccccccChHHhhh---------------cCHHHH-----HHHHHHHHHH
Confidence 333 3442222 24678999985 2222223333432211 111112 2223444678
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|..-.+-|+|||+||.+++..
T Consensus 212 L~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 212 LAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HHHHHTTEEEEEEEEEEESCC
T ss_pred HHHHHHhcCCCcEEEEEeccC
Confidence 888889999999999987644
No 211
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.98 E-value=0.00098 Score=62.46 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=62.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHh--hhcCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLR--NERGGGSS 126 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~--~~~~~~~~ 126 (366)
+.+.+|+|+|||+|..+..+ .+ . +..+++..|+........-+.+ .....+. ..... .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l--------~~--------~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~--~ 133 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREV--------LQ--------H-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGK--H 133 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHH--------TT--------S-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTC--C
T ss_pred CCCCeEEEEcCCcCHHHHHH--------Hh--------C-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCC--C
Confidence 45689999999999988642 11 2 3368889998653333222222 1100000 00000 1
Q ss_pred Cce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 127 PSV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 127 ~~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
+++ ++.+-...|-.. ++++|++++....||-. +..+. -..|
T Consensus 134 ~~v~~~~~D~~~~l~~---~~~fD~Ii~d~~~~~~~--~~~l~---------------------------------~~~~ 175 (281)
T 1mjf_A 134 EKAKLTIGDGFEFIKN---NRGFDVIIADSTDPVGP--AKVLF---------------------------------SEEF 175 (281)
T ss_dssp SSEEEEESCHHHHHHH---CCCEEEEEEECCCCC-------TT---------------------------------SHHH
T ss_pred CcEEEEECchHHHhcc---cCCeeEEEECCCCCCCc--chhhh---------------------------------HHHH
Confidence 233 333322222222 67899999876555411 11110 1346
Q ss_pred HHHHHHHhccCceEEEEee
Q 017747 206 LRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~ 224 (366)
++.-.+-|+|||++++...
T Consensus 176 l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 176 YRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhcCCCcEEEEEcC
Confidence 6777899999999999853
No 212
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=96.96 E-value=0.00089 Score=62.59 Aligned_cols=116 Identities=13% Similarity=0.130 Sum_probs=62.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHh----hhcCCC-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLR----NERGGG- 124 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~----~~~~~~- 124 (366)
...+|+|+|||+|..++. +.+. | . .+|+..|+++.+.-...+ .... ...+..
T Consensus 79 ~~~~vLDlG~G~G~~~~~--------~a~~-----~---~-~~v~~~D~s~~~~~~~a~------~n~~~N~~~~~~~~~ 135 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIV--------AFLA-----G---A-DQVVATDYPDPEILNSLE------SNIREHTANSCSSET 135 (281)
T ss_dssp TTCEEEETTCTTSHHHHH--------HHHT-----T---C-SEEEEEECSCHHHHHHHH------HHHHTTCC-------
T ss_pred CCCeEEEecccccHHHHH--------HHHc-----C---C-CEEEEEeCCCHHHHHHHH------HHHHHhhhhhccccc
Confidence 346999999999998864 2221 1 1 489999984222211111 1110 000000
Q ss_pred -CCCce-EEeccCCCcccccC---CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHH
Q 017747 125 -SSPSV-YIAGYPGSFYGRLF---PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQ 199 (366)
Q Consensus 125 -~~~~~-f~~~vpgSFy~~lf---p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~ 199 (366)
...++ +....-++....+. +++++|+++++.++++...
T Consensus 136 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~------------------------------------- 178 (281)
T 3bzb_A 136 VKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQA------------------------------------- 178 (281)
T ss_dssp ---CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGG-------------------------------------
T ss_pred CCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHH-------------------------------------
Confidence 00122 22222233333333 5789999999888887333
Q ss_pred HHHHHHHHHHHHHhc---c--CceEEEEeecCC
Q 017747 200 EDFTLFLRSRSEELV---V--GGRMVLILLGRI 227 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~---~--GG~lvl~~~g~~ 227 (366)
...+|+.-.+-|+ | ||++++.+..+.
T Consensus 179 --~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~ 209 (281)
T 3bzb_A 179 --HDALLRSVKMLLALPANDPTAVALVTFTHHR 209 (281)
T ss_dssp --HHHHHHHHHHHBCCTTTCTTCEEEEEECC--
T ss_pred --HHHHHHHHHHHhcccCCCCCCEEEEEEEeee
Confidence 2233455577899 9 999988775543
No 213
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.93 E-value=0.00031 Score=60.36 Aligned_cols=79 Identities=6% Similarity=-0.106 Sum_probs=44.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.++ + .+..+|+..|+.......+-+.+. . .+. .+++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~--------~---------~~~~~v~~vD~~~~~~~~a~~~~~-------~-~~~--~~~~ 96 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV--------S---------RGMDKSICIEKNFAALKVIKENIA-------I-TKE--PEKF 96 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH--------H---------TTCSEEEEEESCHHHHHHHHHHHH-------H-HTC--GGGE
T ss_pred CCCCEEEeCCccCHHHHHHH--------H---------cCCCEEEEEECCHHHHHHHHHHHH-------H-hCC--Ccce
Confidence 45799999999999987421 1 112689999986533222222111 1 111 0122
Q ss_pred -EEeccCCCccccc----CCCCcccEEEcccccc
Q 017747 130 -YIAGYPGSFYGRL----FPNNSLHFIHSSNSLH 158 (366)
Q Consensus 130 -f~~~vpgSFy~~l----fp~~s~~~~~S~~alh 158 (366)
++. +++.+.+ ++++++|++++...+|
T Consensus 97 ~~~~---~d~~~~~~~~~~~~~~fD~i~~~~~~~ 127 (187)
T 2fhp_A 97 EVRK---MDANRALEQFYEEKLQFDLVLLDPPYA 127 (187)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEECCCGG
T ss_pred EEEE---CcHHHHHHHHHhcCCCCCEEEECCCCC
Confidence 333 4554422 2378999999876544
No 214
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=96.88 E-value=0.00097 Score=62.30 Aligned_cols=102 Identities=9% Similarity=-0.070 Sum_probs=60.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..|+.+ .+. + +. +|+..|+.......+-+.+ .. ++. .+.+
T Consensus 126 ~~~VLDlgcG~G~~~~~l--------a~~-----~---~~-~V~~vD~s~~~~~~a~~n~-------~~-n~~--~~~v~ 178 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPI--------AVY-----G---KA-KVIAIEKDPYTFKFLVENI-------HL-NKV--EDRMS 178 (278)
T ss_dssp TCEEEETTCTTTTTHHHH--------HHH-----T---CC-EEEEECCCHHHHHHHHHHH-------HH-TTC--TTTEE
T ss_pred CCEEEEecccCCHHHHHH--------HHh-----C---CC-EEEEEECCHHHHHHHHHHH-------HH-cCC--CceEE
Confidence 579999999999999753 222 1 22 7999998654332222111 11 111 1123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+. ++..+ +.+++++|++++. .|... ..||..-
T Consensus 179 ~~~---~D~~~-~~~~~~fD~Vi~~--------~p~~~-----------------------------------~~~l~~~ 211 (278)
T 2frn_A 179 AYN---MDNRD-FPGENIADRILMG--------YVVRT-----------------------------------HEFIPKA 211 (278)
T ss_dssp EEC---SCTTT-CCCCSCEEEEEEC--------CCSSG-----------------------------------GGGHHHH
T ss_pred EEE---CCHHH-hcccCCccEEEEC--------CchhH-----------------------------------HHHHHHH
Confidence 444 35533 3347899999873 23211 1234455
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||++++.....
T Consensus 212 ~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 212 LSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp HHHEEEEEEEEEEEEEE
T ss_pred HHHCCCCeEEEEEEeec
Confidence 77899999999987664
No 215
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.88 E-value=0.0015 Score=58.95 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=26.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
.+.+|+|+|||+|..++.+ .+ ..|..+|+..|+...
T Consensus 71 ~~~~vLDiG~G~G~~~~~l--------a~--------~~~~~~v~~vD~~~~ 106 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQF--------AS--------ISDDIHVTTIERNET 106 (232)
T ss_dssp TCCEEEEECCSSSHHHHHH--------HT--------TCTTCEEEEEECCHH
T ss_pred CCCEEEEEeCchhHHHHHH--------HH--------hCCCCEEEEEECCHH
Confidence 4579999999999998753 11 123588999998643
No 216
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.86 E-value=0.00056 Score=64.17 Aligned_cols=138 Identities=15% Similarity=0.152 Sum_probs=78.5
Q ss_pred HHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCch
Q 017747 33 KHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPD 112 (366)
Q Consensus 33 ~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~ 112 (366)
+|.++.-...+.... +.+.+|+|+|||.|+.|+.+ -...|..+++..|.-...-.-+-..+
T Consensus 116 Lp~lD~fY~~i~~~i-~~p~~VLDLGCG~GpLAl~~----------------~~~~p~a~y~a~DId~~~le~a~~~l-- 176 (281)
T 3lcv_B 116 LPHLDEFYRELFRHL-PRPNTLRDLACGLNPLAAPW----------------MGLPAETVYIASDIDARLVGFVDEAL-- 176 (281)
T ss_dssp GGGHHHHHHHHGGGS-CCCSEEEETTCTTGGGCCTT----------------TTCCTTCEEEEEESBHHHHHHHHHHH--
T ss_pred hHhHHHHHHHHHhcc-CCCceeeeeccCccHHHHHH----------------HhhCCCCEEEEEeCCHHHHHHHHHHH--
Confidence 444444333333222 45889999999999999742 12346689999998653222221111
Q ss_pred hHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCC------
Q 017747 113 FHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESS------ 186 (366)
Q Consensus 113 ~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s------ 186 (366)
...|. +.-+.. .++-... |+...|+++++-++|-|.+-.....-+.-.++|.++|.|+-..
T Consensus 177 ------~~~g~---~~~~~v---~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Gr 243 (281)
T 3lcv_B 177 ------TRLNV---PHRTNV---ADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQR 243 (281)
T ss_dssp ------HHTTC---CEEEEE---CCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-----
T ss_pred ------HhcCC---CceEEE---eeecccC-CCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCC
Confidence 11111 111222 2443333 7888999999999999966444221133346788888876533
Q ss_pred CHHHHHHHHHHHHHHH
Q 017747 187 PSAVSKAYFKQFQEDF 202 (366)
Q Consensus 187 ~~~v~~ay~~Q~~~D~ 202 (366)
.+...+-|..+|.++.
T Consensus 244 s~gm~~~Y~~~~e~~~ 259 (281)
T 3lcv_B 244 SKGMFQNYSQSFESQA 259 (281)
T ss_dssp --CHHHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHH
Confidence 3345566666666554
No 217
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.78 E-value=0.0023 Score=61.65 Aligned_cols=118 Identities=13% Similarity=0.104 Sum_probs=66.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCC-Cc
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSS-PS 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~-~~ 128 (366)
+..+|+|+|||+|..++.+ .+. | .+|+..|+.......+-+.+. . ++.. . .-
T Consensus 153 ~~~~VLDlgcGtG~~sl~l--------a~~-----g-----a~V~~VD~s~~al~~a~~n~~-------~-~gl~-~~~v 205 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVA--------AAA-----G-----AEVTHVDASKKAIGWAKENQV-------L-AGLE-QAPI 205 (332)
T ss_dssp SCCEEEEETCTTCHHHHHH--------HHT-----T-----CEEEEECSCHHHHHHHHHHHH-------H-HTCT-TSCE
T ss_pred CCCcEEEcccccCHHHHHH--------HHc-----C-----CEEEEEECCHHHHHHHHHHHH-------H-cCCC-ccce
Confidence 4579999999999998753 121 1 489999986533222222111 1 1111 1 12
Q ss_pred eEEeccCCCcccccC----CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLF----PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 129 ~f~~~vpgSFy~~lf----p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
-|+. ++..+-+. ..+++|++++. .|..-.. .++.++ ...+|...
T Consensus 206 ~~i~---~D~~~~l~~~~~~~~~fD~Ii~d--------PP~~~~~------~~~~~~---------------~~~~~~~~ 253 (332)
T 2igt_A 206 RWIC---EDAMKFIQREERRGSTYDIILTD--------PPKFGRG------THGEVW---------------QLFDHLPL 253 (332)
T ss_dssp EEEC---SCHHHHHHHHHHHTCCBSEEEEC--------CCSEEEC------TTCCEE---------------EHHHHHHH
T ss_pred EEEE---CcHHHHHHHHHhcCCCceEEEEC--------CccccCC------chHHHH---------------HHHHHHHH
Confidence 2444 35443221 15789999874 2221110 011111 12457778
Q ss_pred HHHHHHHHhccCceEEEEeecC
Q 017747 205 FLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
+|+.-.+-|+|||.++++....
T Consensus 254 ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 254 MLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHHHhcCcCcEEEEEECCC
Confidence 8888899999999988887654
No 218
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.78 E-value=0.002 Score=57.36 Aligned_cols=37 Identities=16% Similarity=0.248 Sum_probs=26.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
.+.+|+|+|||+|..++.+ .+. -++..+++..|+...
T Consensus 69 ~~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~~~~ 105 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALAL--------ALA-------LPADGRVVTCEVDAQ 105 (229)
T ss_dssp TCCEEEEECCTTSHHHHHH--------HTT-------SCTTCEEEEEESCSH
T ss_pred CCCEEEEEcCCccHHHHHH--------HHh-------CCCCCEEEEEECCHH
Confidence 4579999999999998753 221 122478999998653
No 219
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.75 E-value=0.00066 Score=62.94 Aligned_cols=115 Identities=10% Similarity=0.021 Sum_probs=66.1
Q ss_pred HHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCch
Q 017747 33 KHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPD 112 (366)
Q Consensus 33 ~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~ 112 (366)
+|.++.-...++.. +.+-+|+|+|||+|+.++..+ +...++..|+....-+.+-+.+.
T Consensus 90 Lp~ld~fY~~i~~~--~~p~~VLDlGCG~gpLal~~~-------------------~~~~y~a~DId~~~i~~ar~~~~- 147 (253)
T 3frh_A 90 LAELDTLYDFIFSA--ETPRRVLDIACGLNPLALYER-------------------GIASVWGCDIHQGLGDVITPFAR- 147 (253)
T ss_dssp GGGHHHHHHHHTSS--CCCSEEEEETCTTTHHHHHHT-------------------TCSEEEEEESBHHHHHHHHHHHH-
T ss_pred hhhHHHHHHHHhcC--CCCCeEEEecCCccHHHHHhc-------------------cCCeEEEEeCCHHHHHHHHHHHH-
Confidence 45555444433332 457899999999999987521 34889999996543333222211
Q ss_pred hHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEc
Q 017747 113 FHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYIS 183 (366)
Q Consensus 113 ~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~ 183 (366)
..+ .+.-|.. .++.... |+.+.|+++++-++|-|.+-......+---.+|.++|.|+
T Consensus 148 -------~~g---~~~~~~v---~D~~~~~-~~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 148 -------EKD---WDFTFAL---QDVLCAP-PAEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp -------HTT---CEEEEEE---CCTTTSC-CCCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred -------hcC---CCceEEE---eecccCC-CCCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 011 1111222 2554455 5559999999999999977665432222223444444443
No 220
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.74 E-value=0.0011 Score=66.32 Aligned_cols=128 Identities=13% Similarity=0.108 Sum_probs=68.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce-
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV- 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~- 129 (366)
..+|+|+|||+|..|..+ .+.. ....+|+.+|+.......+-+.+ .. .| ..++
T Consensus 260 g~~VLDlgaG~G~~t~~l--------a~~~-------~~~~~v~a~D~s~~~l~~~~~~~-------~~-~g---~~~v~ 313 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHL--------AELM-------KNKGKIYAFDVDKMRMKRLKDFV-------KR-MG---IKIVK 313 (450)
T ss_dssp TCEEEESSCTTCHHHHHH--------HHHT-------TTCSEEEEECSCHHHHHHHHHHH-------HH-TT---CCSEE
T ss_pred cCEEEEeCCCccHHHHHH--------HHHc-------CCCCEEEEEcCCHHHHHHHHHHH-------HH-cC---CCcEE
Confidence 479999999999999853 2221 11268999998754333222211 11 11 1233
Q ss_pred EEeccCCCccccc--CCCCcccEEEc---ccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL--FPNNSLHFIHS---SNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 130 f~~~vpgSFy~~l--fp~~s~~~~~S---~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
++. +++..-. ++++++|.+++ ++.+.-+.+.|..... + ++..+ ....+.-..
T Consensus 314 ~~~---~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~-------~--------~~~~~-----~~l~~~q~~ 370 (450)
T 2yxl_A 314 PLV---KDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWR-------L--------REDKI-----NEMSQLQRE 370 (450)
T ss_dssp EEC---SCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHH-------C--------CTTSH-----HHHHHHHHH
T ss_pred EEE---cChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhh-------C--------CHHHH-----HHHHHHHHH
Confidence 333 3442222 55688999996 2333333333432110 0 01111 111222256
Q ss_pred HHHHHHHHhccCceEEEEeecCC
Q 017747 205 FLRSRSEELVVGGRMVLILLGRI 227 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g~~ 227 (366)
+|..-.+-|+|||+|+++.+...
T Consensus 371 iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 371 LLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp HHHHHHTTEEEEEEEEEEESCCC
T ss_pred HHHHHHHhcCCCcEEEEEeCCCC
Confidence 77888889999999999876543
No 221
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.71 E-value=0.00081 Score=61.78 Aligned_cols=37 Identities=16% Similarity=0.246 Sum_probs=26.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
++.+|+|+|||+|..++.+ .+.. ++..+++..|....
T Consensus 79 ~~~~VLeiG~G~G~~~~~l--------a~~~-------~~~~~v~~iD~s~~ 115 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLAT--------ALAI-------PEDGKILAMDINKE 115 (247)
T ss_dssp TCCEEEEECCGGGHHHHHH--------HHHS-------CTTCEEEEEESCCH
T ss_pred CcCEEEEeCCCcCHHHHHH--------HHhC-------CCCCEEEEEECCHH
Confidence 4579999999999999853 2221 22478999998653
No 222
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.65 E-value=0.0072 Score=59.01 Aligned_cols=122 Identities=17% Similarity=0.273 Sum_probs=66.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+.+.. .+..+++..|+-....... .++
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~---------------~~~~~i~gvDi~~~~~~~a--------------------~~~ 83 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAH---------------GTAYRFVGVEIDPKALDLP--------------------PWA 83 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHH---------------CSCSEEEEEESCTTTCCCC--------------------TTE
T ss_pred CCCEEEECCCCChHHHHHHHHHh---------------CCCCeEEEEECCHHHHHhC--------------------CCC
Confidence 35699999999999887532221 1237888888865321111 011
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHH------HHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQF------QEDFT 203 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~------~~D~~ 203 (366)
..+-+++.. ..+.+++|+++++=-........ ++ ....+++..+.|...+ ...+.
T Consensus 84 --~~~~~D~~~-~~~~~~fD~Ii~NPPy~~~~~~~--------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (421)
T 2ih2_A 84 --EGILADFLL-WEPGEAFDLILGNPPYGIVGEAS--------------KY--PIHVFKAVKDLYKKAFSTWKGKYNLYG 144 (421)
T ss_dssp --EEEESCGGG-CCCSSCEEEEEECCCCCCBSCTT--------------TC--SBCCCHHHHHHHHHHCTTCCTTCCHHH
T ss_pred --cEEeCChhh-cCccCCCCEEEECcCccCccccc--------------cc--ccccCHHHHHHHHHhhhcccCCccHHH
Confidence 112245543 34567899999962111111100 00 0000122333332210 11345
Q ss_pred HHHHHHHHHhccCceEEEEeec
Q 017747 204 LFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
.||..-.+-|+|||++++.+..
T Consensus 145 ~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 145 AFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHhCCCCEEEEEECh
Confidence 8888889999999999999864
No 223
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.64 E-value=0.0037 Score=56.20 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=41.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+. +. ..+++..|+.......+-+.+ . ..+. ..++
T Consensus 91 ~~~~vldiG~G~G~~~~~l~--------~~----------~~~v~~vD~~~~~~~~a~~~~-------~-~~~~--~~~~ 142 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLS--------EV----------AGEVWTFEAVEEFYKTAQKNL-------K-KFNL--GKNV 142 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHH--------HH----------SSEEEEECSCHHHHHHHHHHH-------H-HTTC--CTTE
T ss_pred CCCEEEEeCCCccHHHHHHH--------Hh----------CCEEEEEecCHHHHHHHHHHH-------H-HcCC--CCcE
Confidence 35799999999999887532 21 167888888543222221111 0 1111 0122
Q ss_pred EEeccCCCcccccCCCCcccEEEc
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
..+.+++.+.+++++++|++++
T Consensus 143 --~~~~~d~~~~~~~~~~~D~v~~ 164 (248)
T 2yvl_A 143 --KFFNVDFKDAEVPEGIFHAAFV 164 (248)
T ss_dssp --EEECSCTTTSCCCTTCBSEEEE
T ss_pred --EEEEcChhhcccCCCcccEEEE
Confidence 1123466553337789999997
No 224
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.60 E-value=0.0025 Score=62.23 Aligned_cols=114 Identities=11% Similarity=0.059 Sum_probs=67.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
...+|+|+|||+|..|+.+. .. ..+|+..|+.......+-+ ... .++ ..+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la--------~~----------~~~v~~vD~s~~~~~~a~~-------n~~-~n~---~~~~ 259 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLA--------LG----------FREVVAVDSSAEALRRAEE-------NAR-LNG---LGNV 259 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHH--------HH----------EEEEEEEESCHHHHHHHHH-------HHH-HTT---CTTE
T ss_pred CCCeEEEeeeccCHHHHHHH--------Hh----------CCEEEEEECCHHHHHHHHH-------HHH-HcC---CCCc
Confidence 45799999999999998532 21 1678888875422211111 111 112 122
Q ss_pred eEEeccCCCcccccC----CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLF----PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTL 204 (366)
Q Consensus 129 ~f~~~vpgSFy~~lf----p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~ 204 (366)
.|+. ++..+-+. ..+++|++++ ++|..... +. .+ ....+++..
T Consensus 260 ~~~~---~d~~~~~~~~~~~~~~fD~Ii~--------dpP~~~~~-------~~----------~~-----~~~~~~~~~ 306 (382)
T 1wxx_A 260 RVLE---ANAFDLLRRLEKEGERFDLVVL--------DPPAFAKG-------KK----------DV-----ERAYRAYKE 306 (382)
T ss_dssp EEEE---SCHHHHHHHHHHTTCCEEEEEE--------CCCCSCCS-------TT----------SH-----HHHHHHHHH
T ss_pred eEEE---CCHHHHHHHHHhcCCCeeEEEE--------CCCCCCCC-------hh----------HH-----HHHHHHHHH
Confidence 2343 35433221 2678999985 33332111 10 11 344678889
Q ss_pred HHHHHHHHhccCceEEEEeec
Q 017747 205 FLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 205 FL~~Ra~EL~~GG~lvl~~~g 225 (366)
+|..-.+-|+|||+|+++...
T Consensus 307 ~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 307 VNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHhcCCCCEEEEEECC
Confidence 999999999999999998753
No 225
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.55 E-value=0.00085 Score=67.58 Aligned_cols=127 Identities=11% Similarity=0.014 Sum_probs=69.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|+.+...+ ...-+|+.+|+.......+-+.+. . .| ..++
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~---------------~~~g~V~AvDis~~rl~~~~~n~~-------r-~g---~~nv 158 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQM---------------KGKGLLVTNEIFPKRAKILSENIE-------R-WG---VSNA 158 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHH---------------TTCSEEEEECSSHHHHHHHHHHHH-------H-HT---CSSE
T ss_pred CCCEEEEECCCcCHHHHHHHHHc---------------CCCCEEEEEeCCHHHHHHHHHHHH-------H-cC---CCce
Confidence 35799999999999998643322 123689999996543333322211 1 12 1233
Q ss_pred -EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHH----HHHHHHHHHHH
Q 017747 130 -YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSK----AYFKQFQEDFT 203 (366)
Q Consensus 130 -f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~----ay~~Q~~~D~~ 203 (366)
++. ++...-. ..++++|.+++ +.|+.-.. .+.+ .+.+.. .......+.-.
T Consensus 159 ~v~~---~Da~~l~~~~~~~FD~Il~--------DaPCSg~G----~~rr---------~p~~~~~~~~~~~~~l~~~Q~ 214 (456)
T 3m4x_A 159 IVTN---HAPAELVPHFSGFFDRIVV--------DAPCSGEG----MFRK---------DPNAIKEWTEESPLYCQKRQQ 214 (456)
T ss_dssp EEEC---CCHHHHHHHHTTCEEEEEE--------ECCCCCGG----GTTT---------CHHHHHHCCTTHHHHHHHHHH
T ss_pred EEEe---CCHHHhhhhccccCCEEEE--------CCCCCCcc----cccc---------CHHHhhhcCHHHHHHHHHHHH
Confidence 333 2332111 23678999976 34442211 0000 011110 11223334445
Q ss_pred HHHHHHHHHhccCceEEEEeecC
Q 017747 204 LFLRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g~ 226 (366)
.+|..-.+-|+|||+||.+++..
T Consensus 215 ~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 215 EILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp HHHHHHHHTEEEEEEEEEEESCC
T ss_pred HHHHHHHHhcCCCcEEEEEEeec
Confidence 78888899999999999987644
No 226
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.53 E-value=0.0049 Score=60.74 Aligned_cols=114 Identities=14% Similarity=0.051 Sum_probs=65.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceE
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVY 130 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f 130 (366)
..+|+|+|||+|..|+.+. +. | ..|+..|+.......+-+.+ .. ++. ..-+
T Consensus 215 g~~VLDlg~GtG~~sl~~a--------~~-----g-----a~V~avDis~~al~~a~~n~-------~~-ng~---~~~~ 265 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAA--------RK-----G-----AYALAVDKDLEALGVLDQAA-------LR-LGL---RVDI 265 (393)
T ss_dssp TCEEEEESCTTTHHHHHHH--------HT-----T-----CEEEEEESCHHHHHHHHHHH-------HH-HTC---CCEE
T ss_pred CCeEEEcccchhHHHHHHH--------Hc-----C-----CeEEEEECCHHHHHHHHHHH-------HH-hCC---CCcE
Confidence 5799999999999998531 11 1 34999998754332222211 11 121 1223
Q ss_pred EeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 131 IAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 131 ~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
.. ++..+-+ ..++.+|++++. .|. +.. + +.. .....+|+..++..-
T Consensus 266 ~~---~D~~~~l~~~~~~fD~Ii~d--------pP~-f~~------~----------~~~-----~~~~~~~~~~ll~~a 312 (393)
T 4dmg_A 266 RH---GEALPTLRGLEGPFHHVLLD--------PPT-LVK------R----------PEE-----LPAMKRHLVDLVREA 312 (393)
T ss_dssp EE---SCHHHHHHTCCCCEEEEEEC--------CCC-CCS------S----------GGG-----HHHHHHHHHHHHHHH
T ss_pred EE---ccHHHHHHHhcCCCCEEEEC--------CCc-CCC------C----------HHH-----HHHHHHHHHHHHHHH
Confidence 33 3443322 113349999863 232 211 0 011 234567888899999
Q ss_pred HHHhccCceEEEEeecC
Q 017747 210 SEELVVGGRMVLILLGR 226 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~ 226 (366)
.+-|+|||+|++.....
T Consensus 313 ~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 313 LRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp HHTEEEEEEEEEEECCT
T ss_pred HHhcCCCCEEEEEECCC
Confidence 99999999999665433
No 227
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.48 E-value=0.00049 Score=60.90 Aligned_cols=36 Identities=8% Similarity=-0.080 Sum_probs=25.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
.+.+|+|+|||+|..|+.+ .+. -++..+|+..|+..
T Consensus 56 ~~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~vD~~~ 91 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWF--------ARA-------ISISSRVVMIDPDR 91 (210)
T ss_dssp CCSEEEEESCGGGHHHHHH--------HTT-------SCTTCEEEEEESCH
T ss_pred CCCEEEEEcCCccHHHHHH--------HHh-------CCCCCEEEEEECCH
Confidence 3579999999999998752 221 12247899999854
No 228
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.45 E-value=0.0049 Score=57.30 Aligned_cols=106 Identities=9% Similarity=-0.041 Sum_probs=60.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|+.+ .+. .+..+|+..|+.......+-+. ... ++. .+..
T Consensus 119 ~~~~VLDlgcG~G~~s~~l--------a~~--------~~~~~V~~vD~s~~av~~a~~n-------~~~-n~l--~~~~ 172 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPL--------AKY--------SKPKLVYAIEKNPTAYHYLCEN-------IKL-NKL--NNVI 172 (272)
T ss_dssp TTCEEEETTCTTTTTHHHH--------HHH--------TCCSEEEEEECCHHHHHHHHHH-------HHH-TTC--SSEE
T ss_pred CCCEEEEecCcCCHHHHHH--------HHh--------CCCCEEEEEeCCHHHHHHHHHH-------HHH-cCC--CCEE
Confidence 4579999999999999853 222 1136899999854322222111 111 111 1123
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRSR 209 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~R 209 (366)
|+.+ +..+- -..+++|++++.. |... ..+|..-
T Consensus 173 ~~~~---d~~~~-~~~~~~D~Vi~d~--------p~~~-----------------------------------~~~l~~~ 205 (272)
T 3a27_A 173 PILA---DNRDV-ELKDVADRVIMGY--------VHKT-----------------------------------HKFLDKT 205 (272)
T ss_dssp EEES---CGGGC-CCTTCEEEEEECC--------CSSG-----------------------------------GGGHHHH
T ss_pred EEEC---ChHHc-CccCCceEEEECC--------cccH-----------------------------------HHHHHHH
Confidence 5543 44332 1156899997652 2211 1123444
Q ss_pred HHHhccCceEEEEeecCCC
Q 017747 210 SEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 210 a~EL~~GG~lvl~~~g~~~ 228 (366)
.+.|+|||+++++.....+
T Consensus 206 ~~~LkpgG~l~~s~~~~~~ 224 (272)
T 3a27_A 206 FEFLKDRGVIHYHETVAEK 224 (272)
T ss_dssp HHHEEEEEEEEEEEEEEGG
T ss_pred HHHcCCCCEEEEEEcCccc
Confidence 6789999999999876644
No 229
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.40 E-value=0.0022 Score=57.93 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=25.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
+.+|+|+|||+|..++.+ .+. -++..+++..|...
T Consensus 73 ~~~vLdiG~G~G~~~~~l--------a~~-------~~~~~~v~~iD~~~ 107 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAM--------ALQ-------LPPDGQIIACDQDP 107 (232)
T ss_dssp CCEEEEECCTTSHHHHHH--------HTT-------SCTTCEEEEEESCH
T ss_pred CCEEEEecCCCCHHHHHH--------HHh-------CCCCCEEEEEECCH
Confidence 569999999999998753 221 12246889999854
No 230
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=96.38 E-value=0.0015 Score=59.37 Aligned_cols=36 Identities=11% Similarity=0.104 Sum_probs=26.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
++.+|+|+|||+|..++.+...+ ++..+++..|+..
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~---------------~~~~~v~~iD~~~ 105 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSI---------------PDDGKITAIDFDR 105 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHS---------------CTTCEEEEEESCH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhC---------------CCCCEEEEEECCH
Confidence 46799999999999997532211 2247889999854
No 231
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.36 E-value=0.0056 Score=58.73 Aligned_cols=128 Identities=10% Similarity=0.092 Sum_probs=68.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|.|||+|..++.+.+.+. . ......+++..|+-..-...+-..+. ..| ...-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~--------~---~~~~~~~v~GiDi~~~~~~~a~~n~~--------~~g---~~~~ 187 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLE--------L---KGDVDVHASGVDVDDLLISLALVGAD--------LQR---QKMT 187 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHH--------T---TSSCEEEEEEEESCHHHHHHHHHHHH--------HHT---CCCE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHH--------H---hcCCCceEEEEECCHHHHHHHHHHHH--------hCC---CCce
Confidence 468999999999998876443321 0 00123789999985422221111110 011 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHH-HHHHHH
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDF-TLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~-~~FL~~ 208 (366)
+.. +++... .+.+.+|+++++--+++.... . ....-.+...+|. .|. ..|+..
T Consensus 188 i~~---~D~l~~-~~~~~fD~Ii~NPPfg~~~~~-~-~~~~~~~~~~~g~--------------------~~~~~~~l~~ 241 (344)
T 2f8l_A 188 LLH---QDGLAN-LLVDPVDVVISDLPVGYYPDD-E-NAKTFELCREEGH--------------------SFAHFLFIEQ 241 (344)
T ss_dssp EEE---SCTTSC-CCCCCEEEEEEECCCSEESCH-H-HHTTSTTCCSSSC--------------------EEHHHHHHHH
T ss_pred EEE---CCCCCc-cccCCccEEEECCCCCCcCch-h-hhhhccccCCCCc--------------------chHHHHHHHH
Confidence 222 354443 356789999999777664321 0 0000000001111 012 246777
Q ss_pred HHHHhccCceEEEEeec
Q 017747 209 RSEELVVGGRMVLILLG 225 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g 225 (366)
-.+-|+|||++++.+..
T Consensus 242 ~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 242 GMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp HHHTEEEEEEEEEEEEG
T ss_pred HHHHhCCCCEEEEEECc
Confidence 78899999999999854
No 232
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.30 E-value=0.01 Score=59.95 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=42.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
+..+|+|+|||+|..++.+ .+ .+..+|+..|+.. ....+-+ .. ...+. ..++
T Consensus 158 ~~~~VLDiGcGtG~la~~l--------a~---------~~~~~V~gvD~s~-~l~~A~~-------~~-~~~gl--~~~v 209 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFA--------AQ---------AGARKIYAVEAST-MAQHAEV-------LV-KSNNL--TDRI 209 (480)
T ss_dssp TTCEEEEESCSTTHHHHHH--------HH---------TTCSEEEEEECHH-HHHHHHH-------HH-HHTTC--TTTE
T ss_pred CCCEEEEecCcccHHHHHH--------HH---------cCCCEEEEEEcHH-HHHHHHH-------HH-HHcCC--CCcE
Confidence 3579999999999987642 22 1236899999853 2211111 11 11121 1222
Q ss_pred -EEeccCCCcccccCCCCcccEEEccccc
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSL 157 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~al 157 (366)
++. +++.+--+ ++++|+++|...+
T Consensus 210 ~~~~---~d~~~~~~-~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 210 VVIP---GKVEEVSL-PEQVDIIISEPMG 234 (480)
T ss_dssp EEEE---SCTTTCCC-SSCEEEEECCCCH
T ss_pred EEEE---CchhhCcc-CCCeEEEEEeCch
Confidence 333 45544223 4689999997653
No 233
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=96.29 E-value=0.0088 Score=55.53 Aligned_cols=100 Identities=8% Similarity=0.019 Sum_probs=58.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||+|..+.. +. .. + .++...|+-.......-+.++.+...+. .++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~--------ll--------~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~-------~~r 125 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQ--------LF--------KY-D-THIDFVQADEKILDSFISFFPHFHEVKN-------NKN 125 (262)
T ss_dssp SCCCEEEEESSCCHHHHHH--------HT--------TS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHT-------CTT
T ss_pred CCCCEEEEEeCCcCHHHHH--------HH--------hC-C-CEEEEEECCHHHHHHHHHHHHhhccccC-------CCe
Confidence 4568999999999987753 11 12 4 6888999865333333333332211111 122
Q ss_pred e-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 129 V-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 129 ~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
+ ++.+ +..+-+ +++|++++.. + + + . .|++
T Consensus 126 v~~~~~---D~~~~~---~~fD~Ii~d~--------~----d-----------------p--~-------------~~~~ 155 (262)
T 2cmg_A 126 FTHAKQ---LLDLDI---KKYDLIFCLQ--------E----P-----------------D--I-------------HRID 155 (262)
T ss_dssp EEEESS---GGGSCC---CCEEEEEESS--------C----C-----------------C--H-------------HHHH
T ss_pred EEEEec---hHHHHH---hhCCEEEECC--------C----C-----------------h--H-------------HHHH
Confidence 2 3333 322212 7899998752 1 1 0 1 0677
Q ss_pred HHHHHhccCceEEEEe
Q 017747 208 SRSEELVVGGRMVLIL 223 (366)
Q Consensus 208 ~Ra~EL~~GG~lvl~~ 223 (366)
...+-|+|||+|++..
T Consensus 156 ~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 156 GLKRMLKEDGVFISVA 171 (262)
T ss_dssp HHHTTEEEEEEEEEEE
T ss_pred HHHHhcCCCcEEEEEc
Confidence 8899999999999974
No 234
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.83 E-value=0.0059 Score=57.25 Aligned_cols=34 Identities=18% Similarity=0.350 Sum_probs=25.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
..+|+|+|||+|..++.+ .+ . |..+|+..|+...
T Consensus 124 ~~~vLDlG~GsG~~~~~l--------a~--------~-~~~~v~~vDis~~ 157 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSV--------AK--------F-SDAIVFATDVSSK 157 (284)
T ss_dssp CCEEEEESCTTSHHHHHH--------HH--------H-SSCEEEEEESCHH
T ss_pred CCEEEEEeCchhHHHHHH--------HH--------C-CCCEEEEEECCHH
Confidence 468999999999998752 22 1 3488999998643
No 235
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=95.76 E-value=0.0024 Score=59.94 Aligned_cols=80 Identities=11% Similarity=0.077 Sum_probs=46.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ .++ + .+|+..|+.......+-+.+. ..+. .+++
T Consensus 28 ~~~~VLDiG~G~G~lt~~L--------~~~-----~-----~~v~~vD~~~~~~~~a~~~~~--------~~~~--~~~v 79 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKL--------LEK-----A-----KKVVACELDPRLVAELHKRVQ--------GTPV--ASKL 79 (285)
T ss_dssp TTCEEEEECCTTSTTHHHH--------HHH-----S-----SEEEEEESCHHHHHHHHHHHT--------TSTT--GGGE
T ss_pred CCCEEEEEcCcccHHHHHH--------Hhh-----C-----CEEEEEECCHHHHHHHHHHHH--------hcCC--CCce
Confidence 4579999999999999753 222 1 478888875432222221111 0000 0122
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccC
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~ 162 (366)
++. +++.+--+| ++|.++++...||.+.
T Consensus 80 ~~~~---~D~~~~~~~--~fD~vv~nlpy~~~~~ 108 (285)
T 1zq9_A 80 QVLV---GDVLKTDLP--FFDTCVANLPYQISSP 108 (285)
T ss_dssp EEEE---SCTTTSCCC--CCSEEEEECCGGGHHH
T ss_pred EEEE---cceecccch--hhcEEEEecCcccchH
Confidence 333 455443233 7999999999888654
No 236
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=95.71 E-value=0.0092 Score=58.38 Aligned_cols=118 Identities=10% Similarity=0.065 Sum_probs=67.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|+.+ .+. ...+|+..|+.......+-+. ... ++.. .+-.
T Consensus 217 ~~~~VLDl~~G~G~~~~~l--------a~~---------g~~~v~~vD~s~~~l~~a~~n-------~~~-n~~~-~~v~ 270 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHA--------AIA---------GADEVIGIDKSPRAIETAKEN-------AKL-NGVE-DRMK 270 (396)
T ss_dssp TTCEEEETTCTTTHHHHHH--------HHT---------TCSEEEEEESCHHHHHHHHHH-------HHH-TTCG-GGEE
T ss_pred CCCeEEEecCCCCHHHHHH--------HHC---------CCCEEEEEeCCHHHHHHHHHH-------HHH-cCCC-ccce
Confidence 4579999999999998753 221 115789999854322222111 111 1110 0122
Q ss_pred EEeccCCCcccccC----CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLF----PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~lf----p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
|+. ++..+.+. +.+++|++++ +.|... . ++ ..+ ....+++..+
T Consensus 271 ~~~---~d~~~~~~~~~~~~~~fD~Vi~--------dpP~~~-~------~~----------~~~-----~~~~~~~~~~ 317 (396)
T 2as0_A 271 FIV---GSAFEEMEKLQKKGEKFDIVVL--------DPPAFV-Q------HE----------KDL-----KAGLRAYFNV 317 (396)
T ss_dssp EEE---SCHHHHHHHHHHTTCCEEEEEE--------CCCCSC-S------SG----------GGH-----HHHHHHHHHH
T ss_pred EEE---CCHHHHHHHHHhhCCCCCEEEE--------CCCCCC-C------CH----------HHH-----HHHHHHHHHH
Confidence 444 35433221 2678999986 223211 1 11 111 3345788899
Q ss_pred HHHHHHHhccCceEEEEeecC
Q 017747 206 LRSRSEELVVGGRMVLILLGR 226 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g~ 226 (366)
|..-.+-|+|||+|+++....
T Consensus 318 l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 318 NFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp HHHHHTTEEEEEEEEEEECCT
T ss_pred HHHHHHhcCCCcEEEEEECCC
Confidence 999999999999998887543
No 237
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=95.71 E-value=0.0052 Score=58.27 Aligned_cols=79 Identities=11% Similarity=0.014 Sum_probs=50.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..|..+ .++ ..+|+..|+-......+-+.+. . .+++
T Consensus 50 ~~~~VLEIG~G~G~lT~~L--------a~~----------~~~V~aVEid~~li~~a~~~~~-------~------~~~v 98 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEEL--------AKN----------AKKVYVIEIDKSLEPYANKLKE-------L------YNNI 98 (295)
T ss_dssp TTCEEEEECCTTSHHHHHH--------HHH----------SSEEEEEESCGGGHHHHHHHHH-------H------CSSE
T ss_pred CcCEEEEECCCchHHHHHH--------Hhc----------CCEEEEEECCHHHHHHHHHHhc-------c------CCCe
Confidence 3579999999999999863 222 1578888886543333322211 0 1232
Q ss_pred -EEeccCCCcccccCCCCcccEEEcccccccccC
Q 017747 130 -YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 130 -f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~ 162 (366)
++. |++.+--+|+.++|.++++...||.+.
T Consensus 99 ~vi~---gD~l~~~~~~~~fD~Iv~NlPy~is~p 129 (295)
T 3gru_A 99 EIIW---GDALKVDLNKLDFNKVVANLPYQISSP 129 (295)
T ss_dssp EEEE---SCTTTSCGGGSCCSEEEEECCGGGHHH
T ss_pred EEEE---CchhhCCcccCCccEEEEeCcccccHH
Confidence 333 567655577778999999988877543
No 238
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=95.60 E-value=0.0054 Score=59.74 Aligned_cols=102 Identities=12% Similarity=0.064 Sum_probs=56.8
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEec
Q 017747 17 SYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLN 96 (366)
Q Consensus 17 sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~n 96 (366)
.|...+.++..+...+..+. .....+|+|+|||+|..++.+ ... .+..+++..
T Consensus 195 ~~~~~a~l~~~la~~l~~~~-----------~~~~~~vLD~gCGsG~~~i~~--------a~~--------~~~~~v~g~ 247 (373)
T 3tm4_A 195 VYDHPAHLKASIANAMIELA-----------ELDGGSVLDPMCGSGTILIEL--------ALR--------RYSGEIIGI 247 (373)
T ss_dssp CSCCTTCCCHHHHHHHHHHH-----------TCCSCCEEETTCTTCHHHHHH--------HHT--------TCCSCEEEE
T ss_pred cccCCCCccHHHHHHHHHhh-----------cCCCCEEEEccCcCcHHHHHH--------HHh--------CCCCeEEEE
Confidence 34555555555555444322 134578999999999988642 121 122478999
Q ss_pred CCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEccccc
Q 017747 97 DLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSL 157 (366)
Q Consensus 97 DLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~al 157 (366)
|+........-+.+. ..|.. ..-.|.. +++.+-.+|++++|+++++--+
T Consensus 248 Dis~~~l~~A~~n~~--------~~gl~-~~i~~~~---~D~~~~~~~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 248 EKYRKHLIGAEMNAL--------AAGVL-DKIKFIQ---GDATQLSQYVDSVDFAISNLPY 296 (373)
T ss_dssp ESCHHHHHHHHHHHH--------HTTCG-GGCEEEE---CCGGGGGGTCSCEEEEEEECCC
T ss_pred eCCHHHHHHHHHHHH--------HcCCC-CceEEEE---CChhhCCcccCCcCEEEECCCC
Confidence 986543333322211 11110 0112333 4666655778999999996443
No 239
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=95.59 E-value=0.022 Score=49.48 Aligned_cols=75 Identities=7% Similarity=0.012 Sum_probs=42.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++. +.+. +..+++..|+.......+-+.+. +--
T Consensus 51 ~~~~vlD~gcG~G~~~~~--------l~~~---------~~~~v~~vD~~~~~~~~a~~~~~---------------~~~ 98 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACG--------SYLL---------GAESVTAFDIDPDAIETAKRNCG---------------GVN 98 (200)
T ss_dssp BTSEEEEETCTTCHHHHH--------HHHT---------TBSEEEEEESCHHHHHHHHHHCT---------------TSE
T ss_pred CCCEEEEEeCCccHHHHH--------HHHc---------CCCEEEEEECCHHHHHHHHHhcC---------------CCE
Confidence 457999999999998864 2221 22468999985432221111111 112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccC
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~ 162 (366)
|+. +++.+ +| +++|+++++..+||++.
T Consensus 99 ~~~---~d~~~--~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 99 FMV---ADVSE--IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp EEE---CCGGG--CC-CCEEEEEECCCC-----
T ss_pred EEE---CcHHH--CC-CCeeEEEECCCchhccC
Confidence 333 35543 34 79999999999999754
No 240
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=95.49 E-value=0.0095 Score=58.32 Aligned_cols=116 Identities=13% Similarity=0.113 Sum_probs=64.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCC-Cce
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSS-PSV 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~-~~~ 129 (366)
..+|+|+|||+|..|+.+. .. | .-+|+..|+.......+-+.+ .. ++.. . .--
T Consensus 213 ~~~VLDl~cGtG~~sl~la--------~~-----g----a~~V~~vD~s~~al~~A~~N~-------~~-n~~~-~~~v~ 266 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAA--------MG-----G----AMATTSVDLAKRSRALSLAHF-------EA-NHLD-MANHQ 266 (385)
T ss_dssp TCEEEEETCTTTHHHHHHH--------HT-----T----BSEEEEEESCTTHHHHHHHHH-------HH-TTCC-CTTEE
T ss_pred CCeEEEEeeccCHHHHHHH--------HC-----C----CCEEEEEECCHHHHHHHHHHH-------HH-cCCC-ccceE
Confidence 4689999999999997531 11 1 147999998764333322211 11 1211 1 123
Q ss_pred EEeccCCCccccc--C--CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL--F--PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLF 205 (366)
Q Consensus 130 f~~~vpgSFy~~l--f--p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~F 205 (366)
|+.+ +..+-+ + ...++|++++. |+.... +++. ..+..+++..+
T Consensus 267 ~~~~---D~~~~l~~~~~~~~~fD~Ii~D---------PP~~~~------~~~~---------------~~~~~~~~~~l 313 (385)
T 2b78_A 267 LVVM---DVFDYFKYARRHHLTYDIIIID---------PPSFAR------NKKE---------------VFSVSKDYHKL 313 (385)
T ss_dssp EEES---CHHHHHHHHHHTTCCEEEEEEC---------CCCC-----------C---------------CCCHHHHHHHH
T ss_pred EEEC---CHHHHHHHHHHhCCCccEEEEC---------CCCCCC------Chhh---------------HHHHHHHHHHH
Confidence 4443 443322 1 14589999863 222110 0010 11234677778
Q ss_pred HHHHHHHhccCceEEEEeec
Q 017747 206 LRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~GG~lvl~~~g 225 (366)
+..-.+-|+|||.++++...
T Consensus 314 l~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 314 IRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp HHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHhcCCCcEEEEEeCC
Confidence 88888999999999998743
No 241
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=95.48 E-value=0.018 Score=53.17 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=62.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+...+|+|+|||+|..++. +.+. .|..+|+..|+-..-....-+.+. .+|. ...
T Consensus 20 ~~g~~VlDIGtGsG~l~i~--------la~~--------~~~~~V~avDi~~~al~~A~~N~~--------~~gl--~~~ 73 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCF--------AVKN--------QTASFAIAGEVVDGPFQSAQKQVR--------SSGL--TEQ 73 (244)
T ss_dssp CSSEEEEEETCSTTHHHHH--------HHHT--------TSEEEEEEEESSHHHHHHHHHHHH--------HTTC--TTT
T ss_pred CCCCEEEEECCccHHHHHH--------HHHh--------CCCCEEEEEECCHHHHHHHHHHHH--------HcCC--Cce
Confidence 3458999999999999985 2221 244689999986543333222211 1121 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+- ..-|+.++.+.|.+++|++++. .. . ..-...+|..
T Consensus 74 I~--v~~gD~l~~~~~~~~~D~Ivia-----------gm-G-----------------------------g~lI~~IL~~ 110 (244)
T 3gnl_A 74 ID--VRKGNGLAVIEKKDAIDTIVIA-----------GM-G-----------------------------GTLIRTILEE 110 (244)
T ss_dssp EE--EEECSGGGGCCGGGCCCEEEEE-----------EE-C-----------------------------HHHHHHHHHH
T ss_pred EE--EEecchhhccCccccccEEEEe-----------CC-c-----------------------------hHHHHHHHHH
Confidence 21 1224666666555568888752 11 0 1124456667
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
..+-|+++|+||++-
T Consensus 111 ~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 111 GAAKLAGVTKLILQP 125 (244)
T ss_dssp TGGGGTTCCEEEEEE
T ss_pred HHHHhCCCCEEEEEc
Confidence 677889999999884
No 242
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=95.43 E-value=0.016 Score=53.01 Aligned_cols=106 Identities=12% Similarity=0.089 Sum_probs=62.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
++..+|+|+|||||..++.+ .+. .|..+|+..|+...-....-+.+. .+|. ..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~l--------a~~--------~~~~~V~AvDi~~~al~~A~~N~~--------~~gl--~~~ 73 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFL--------LQM--------GYCDFAIAGEVVNGPYQSALKNVS--------EHGL--TSK 73 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHH--------HHT--------TCEEEEEEEESSHHHHHHHHHHHH--------HTTC--TTT
T ss_pred CCCCEEEEECCchHHHHHHH--------HHh--------CCCCEEEEEECCHHHHHHHHHHHH--------HcCC--CCc
Confidence 34589999999999999852 221 234689999996543333322221 1121 112
Q ss_pred eEEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
+- ..-|+.++-+.|.+.+|++++. +. . ..-...||..
T Consensus 74 I~--~~~gD~l~~~~~~~~~D~Ivia-----------Gm------------------G------------g~lI~~IL~~ 110 (230)
T 3lec_A 74 ID--VRLANGLSAFEEADNIDTITIC-----------GM------------------G------------GRLIADILNN 110 (230)
T ss_dssp EE--EEECSGGGGCCGGGCCCEEEEE-----------EE------------------C------------HHHHHHHHHH
T ss_pred EE--EEECchhhccccccccCEEEEe-----------CC------------------c------------hHHHHHHHHH
Confidence 21 1224666666655578877742 11 0 1123456666
Q ss_pred HHHHhccCceEEEEe
Q 017747 209 RSEELVVGGRMVLIL 223 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~ 223 (366)
..+-|+++|+||++-
T Consensus 111 ~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 111 DIDKLQHVKTLVLQP 125 (230)
T ss_dssp TGGGGTTCCEEEEEE
T ss_pred HHHHhCcCCEEEEEC
Confidence 677799999999885
No 243
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.42 E-value=0.023 Score=51.70 Aligned_cols=37 Identities=5% Similarity=0.011 Sum_probs=27.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
+...+|+|+|||||..++.+ .+ ..|..+|+..|....
T Consensus 14 ~~g~~VlDIGtGsG~l~i~l--------a~--------~~~~~~V~avDi~~~ 50 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIEL--------VE--------RGQIKSAIAGEVVEG 50 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHH--------HH--------TTSEEEEEEEESSHH
T ss_pred CCCCEEEEeCCCcHHHHHHH--------HH--------hCCCCEEEEEECCHH
Confidence 34579999999999999852 22 134478999998653
No 244
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=94.92 E-value=0.017 Score=60.43 Aligned_cols=102 Identities=17% Similarity=0.132 Sum_probs=56.1
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCC
Q 017747 20 RNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLP 99 (366)
Q Consensus 20 ~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp 99 (366)
+....|+++..++++++.+. ....+..+|+|+|||+|+.+...+... ++ + .. .++||.-+-.
T Consensus 333 Ky~~Ye~AI~~Al~d~~~~~------~~~~~~~vVldVGaGrGpLv~~al~A~----a~------~-~~-~vkVyAVEkn 394 (637)
T 4gqb_A 333 KYSQYQQAIYKCLLDRVPEE------EKDTNVQVLMVLGAGRGPLVNASLRAA----KQ------A-DR-RIKLYAVEKN 394 (637)
T ss_dssp HHHHHHHHHHHHHHHHSCGG------GTTTCEEEEEEESCTTSHHHHHHHHHH----HH------T-TC-EEEEEEEESC
T ss_pred hHHHHHHHHHHHHHHhhhhc------cccCCCcEEEEECCCCcHHHHHHHHHH----Hh------c-CC-CcEEEEEECC
Confidence 56667776666655544331 012346789999999999977544333 22 1 11 3788988764
Q ss_pred CCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEc
Q 017747 100 TNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHS 153 (366)
Q Consensus 100 ~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S 153 (366)
.|=. +.+. ..+.++.. ..| ..+.|+- +.+-+++.+|+++|
T Consensus 395 p~A~--~a~~-------~v~~N~~~--dkV--tVI~gd~-eev~LPEKVDIIVS 434 (637)
T 4gqb_A 395 PNAV--VTLE-------NWQFEEWG--SQV--TVVSSDM-REWVAPEKADIIVS 434 (637)
T ss_dssp HHHH--HHHH-------HHHHHTTG--GGE--EEEESCT-TTCCCSSCEEEEEC
T ss_pred HHHH--HHHH-------HHHhccCC--CeE--EEEeCcc-eeccCCcccCEEEE
Confidence 3211 1111 11222321 122 2333555 56666688999998
No 245
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=94.88 E-value=0.013 Score=53.46 Aligned_cols=58 Identities=16% Similarity=0.078 Sum_probs=34.5
Q ss_pred chHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEe
Q 017747 16 TSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYL 95 (366)
Q Consensus 16 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~ 95 (366)
.+|.+|-..+..++..+...+. .....+|+|+|||+|..|..+ .++ + .+|+.
T Consensus 6 k~~gQ~fl~d~~~~~~i~~~~~----------~~~~~~VLDiG~G~G~lt~~l--------~~~-----~-----~~v~~ 57 (244)
T 1qam_A 6 IKHSQNFITSKHNIDKIMTNIR----------LNEHDNIFEIGSGKGHFTLEL--------VQR-----C-----NFVTA 57 (244)
T ss_dssp ----CCBCCCHHHHHHHHTTCC----------CCTTCEEEEECCTTSHHHHHH--------HHH-----S-----SEEEE
T ss_pred ccCCccccCCHHHHHHHHHhCC----------CCCCCEEEEEeCCchHHHHHH--------HHc-----C-----CeEEE
Confidence 4677776666666654432211 124578999999999999753 222 1 57888
Q ss_pred cCCCCC
Q 017747 96 NDLPTN 101 (366)
Q Consensus 96 nDLp~N 101 (366)
.|+...
T Consensus 58 vD~~~~ 63 (244)
T 1qam_A 58 IEIDHK 63 (244)
T ss_dssp ECSCHH
T ss_pred EECCHH
Confidence 888643
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=94.76 E-value=0.008 Score=56.75 Aligned_cols=108 Identities=11% Similarity=0.036 Sum_probs=53.0
Q ss_pred CCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcc
Q 017747 12 GTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEF 91 (366)
Q Consensus 12 g~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~ 91 (366)
+....+|.+|-..+..++..+...+. .....+|+|+|||+|..|..+ .+ . ..
T Consensus 14 ~~~~k~~Gq~fl~~~~i~~~i~~~~~----------~~~~~~VLDiG~G~G~lt~~L--------a~---------~-~~ 65 (299)
T 2h1r_A 14 RENLYFQGQHLLKNPGILDKIIYAAK----------IKSSDIVLEIGCGTGNLTVKL--------LP---------L-AK 65 (299)
T ss_dssp ---------CEECCHHHHHHHHHHHC----------CCTTCEEEEECCTTSTTHHHH--------TT---------T-SS
T ss_pred ccchhccccceecCHHHHHHHHHhcC----------CCCcCEEEEEcCcCcHHHHHH--------Hh---------c-CC
Confidence 33444666665555555544332221 134579999999999999752 11 1 25
Q ss_pred eEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCceEEeccCCCcccccCCCCcccEEEcccccccccC
Q 017747 92 HFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSVYIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 92 ~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~ 162 (366)
+|+..|+.......+-+.+ .. .+ .+++ ..+-+++.+- |..++|+++++...||.+.
T Consensus 66 ~v~~vDi~~~~~~~a~~~~-------~~-~~---~~~v--~~~~~D~~~~--~~~~~D~Vv~n~py~~~~~ 121 (299)
T 2h1r_A 66 KVITIDIDSRMISEVKKRC-------LY-EG---YNNL--EVYEGDAIKT--VFPKFDVCTANIPYKISSP 121 (299)
T ss_dssp EEEEECSCHHHHHHHHHHH-------HH-TT---CCCE--EC----CCSS--CCCCCSEEEEECCGGGHHH
T ss_pred EEEEEECCHHHHHHHHHHH-------HH-cC---CCce--EEEECchhhC--CcccCCEEEEcCCcccccH
Confidence 7899998543222221111 10 11 1222 1233466432 3348999999988888653
No 247
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=94.65 E-value=0.062 Score=50.38 Aligned_cols=20 Identities=20% Similarity=0.318 Sum_probs=16.9
Q ss_pred HHHHHHHhccC-ceEEEEeec
Q 017747 206 LRSRSEELVVG-GRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~G-G~lvl~~~g 225 (366)
|..-.+-|+|| |.||+-.+.
T Consensus 166 L~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 166 LDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp HHHHHHHHTTCCSEEEEEESC
T ss_pred HHHHHHHhCCCCCeEEEEecC
Confidence 66667889999 999998876
No 248
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=94.47 E-value=0.021 Score=58.72 Aligned_cols=82 Identities=15% Similarity=0.268 Sum_probs=51.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|+|||.|..|.. +.++ | .+|+.-|+........-.. ..+.|. ..-
T Consensus 65 ~~~~~vLDvGCG~G~~~~~--------la~~-----g-----a~V~giD~~~~~i~~a~~~--------a~~~~~--~~~ 116 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLS--------LASK-----G-----ATIVGIDFQQENINVCRAL--------AEENPD--FAA 116 (569)
T ss_dssp TSCCEEEEETCTTSHHHHH--------HHHT-----T-----CEEEEEESCHHHHHHHHHH--------HHTSTT--SEE
T ss_pred CCCCeEEEECCCCcHHHHH--------HHhC-----C-----CEEEEECCCHHHHHHHHHH--------HHhcCC--Cce
Confidence 4679999999999998864 4332 2 7899999875422211110 011111 112
Q ss_pred eEEeccCCCccccc---CCCCcccEEEcccccccccC
Q 017747 129 VYIAGYPGSFYGRL---FPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 129 ~f~~~vpgSFy~~l---fp~~s~~~~~S~~alhWls~ 162 (366)
-|..+ +. +.| ++++++|+|++.-.+|++.+
T Consensus 117 ~~~~~---~~-~~~~~~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 117 EFRVG---RI-EEVIAALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp EEEEC---CH-HHHHHHCCTTSCSEEEEESCHHHHHH
T ss_pred EEEEC---CH-HHHhhhccCCCccEEEECcchhcCCC
Confidence 25554 33 333 57889999999999999765
No 249
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=94.36 E-value=0.054 Score=53.85 Aligned_cols=21 Identities=33% Similarity=0.439 Sum_probs=18.5
Q ss_pred HHHHHHHHHhccCceEEEEee
Q 017747 204 LFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.||+.-.+-|+|||++++.++
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhccCCEEEEEEC
Confidence 678888899999999999985
No 250
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=94.28 E-value=0.14 Score=49.58 Aligned_cols=106 Identities=11% Similarity=0.017 Sum_probs=61.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+| |+|..++.+ ... .|..+|+..|+........-+.+. ..|. .++
T Consensus 172 ~~~~VLDlG-G~G~~~~~l--------a~~--------~~~~~v~~vDi~~~~l~~a~~~~~--------~~g~---~~v 223 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIAL--------MLS--------GLPKRIAVLDIDERLTKFIEKAAN--------EIGY---EDI 223 (373)
T ss_dssp TTCEEEEES-CTTCHHHHH--------HHH--------TCCSEEEEECSCHHHHHHHHHHHH--------HHTC---CCE
T ss_pred CCCEEEEEC-CCCHHHHHH--------HHh--------CCCCEEEEEECCHHHHHHHHHHHH--------HcCC---CCE
Confidence 357999999 999998752 221 233689999986432222221111 1121 122
Q ss_pred EEeccCCCcccccC--CCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRLF--PNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLR 207 (366)
Q Consensus 130 f~~~vpgSFy~~lf--p~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~ 207 (366)
..+.+++.+.+- +++++|+++++.-+|+. +...||+
T Consensus 224 --~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~----------------------------------------~~~~~l~ 261 (373)
T 2qm3_A 224 --EIFTFDLRKPLPDYALHKFDTFITDPPETLE----------------------------------------AIRAFVG 261 (373)
T ss_dssp --EEECCCTTSCCCTTTSSCBSEEEECCCSSHH----------------------------------------HHHHHHH
T ss_pred --EEEEChhhhhchhhccCCccEEEECCCCchH----------------------------------------HHHHHHH
Confidence 223356654331 34689999986433221 1266788
Q ss_pred HHHHHhccCceE-EEEeec
Q 017747 208 SRSEELVVGGRM-VLILLG 225 (366)
Q Consensus 208 ~Ra~EL~~GG~l-vl~~~g 225 (366)
.-.+-|+|||++ ++++..
T Consensus 262 ~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 262 RGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp HHHHTBCSTTCEEEEEECT
T ss_pred HHHHHcccCCeEEEEEEec
Confidence 888999999965 666543
No 251
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=94.23 E-value=0.031 Score=59.16 Aligned_cols=119 Identities=17% Similarity=0.146 Sum_probs=66.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-e
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS-V 129 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~-~ 129 (366)
..+|+|+|||+|..|+.+. .. | . -+|+..|+.......+-+. ... ++.. ..+ .
T Consensus 540 g~~VLDlg~GtG~~sl~aa--------~~-----g---a-~~V~aVD~s~~al~~a~~N-------~~~-ngl~-~~~v~ 593 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAG--------LG-----G---A-RSTTTVDMSRTYLEWAERN-------LRL-NGLT-GRAHR 593 (703)
T ss_dssp TCEEEEESCTTCHHHHHHH--------HT-----T---C-SEEEEEESCHHHHHHHHHH-------HHH-TTCC-STTEE
T ss_pred CCcEEEeeechhHHHHHHH--------HC-----C---C-CEEEEEeCCHHHHHHHHHH-------HHH-cCCC-ccceE
Confidence 4689999999999987521 11 1 1 4699999865322222111 111 1211 112 2
Q ss_pred EEeccCCCccccc-CCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGRL-FPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFLRS 208 (366)
Q Consensus 130 f~~~vpgSFy~~l-fp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL~~ 208 (366)
|+. ++.++-+ ...+++|++++. .|. +.. ++.. .+ ..+..+|...++..
T Consensus 594 ~i~---~D~~~~l~~~~~~fD~Ii~D--------PP~-f~~------~~~~-----------~~--~~~~~~~~~~ll~~ 642 (703)
T 3v97_A 594 LIQ---ADCLAWLREANEQFDLIFID--------PPT-FSN------SKRM-----------ED--AFDVQRDHLALMKD 642 (703)
T ss_dssp EEE---SCHHHHHHHCCCCEEEEEEC--------CCS-BC--------------------------CCBHHHHHHHHHHH
T ss_pred EEe---cCHHHHHHhcCCCccEEEEC--------Ccc-ccC------Cccc-----------hh--HHHHHHHHHHHHHH
Confidence 444 3444433 245789999863 332 211 0000 00 01235678888999
Q ss_pred HHHHhccCceEEEEeecC
Q 017747 209 RSEELVVGGRMVLILLGR 226 (366)
Q Consensus 209 Ra~EL~~GG~lvl~~~g~ 226 (366)
-.+-|+|||+|+++...+
T Consensus 643 a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 643 LKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp HHHHEEEEEEEEEEECCT
T ss_pred HHHhcCCCcEEEEEECCc
Confidence 999999999999887553
No 252
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=94.22 E-value=0.055 Score=47.07 Aligned_cols=79 Identities=11% Similarity=0.137 Sum_probs=46.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|+|||+|..++.+ .+. .+ -+++..|+.......+-+.+.. .+ ..--
T Consensus 49 ~~~~vlD~g~G~G~~~~~l--------~~~--------~~-~~v~~vD~~~~~~~~a~~~~~~--------~~---~~~~ 100 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGA--------LLL--------GA-KEVICVEVDKEAVDVLIENLGE--------FK---GKFK 100 (207)
T ss_dssp TTCEEEEETCTTCHHHHHH--------HHT--------TC-SEEEEEESCHHHHHHHHHHTGG--------GT---TSEE
T ss_pred CcCEEEEeeCCCCHHHHHH--------HHc--------CC-CEEEEEECCHHHHHHHHHHHHH--------cC---CCEE
Confidence 4579999999999988742 221 11 4789999865333222222211 01 1112
Q ss_pred EEeccCCCcccccCCCCcccEEEcccccccccC
Q 017747 130 YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSK 162 (366)
Q Consensus 130 f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~ 162 (366)
++. +++.+ +| +++|+++++-.+|+.+.
T Consensus 101 ~~~---~d~~~--~~-~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 101 VFI---GDVSE--FN-SRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp EEE---SCGGG--CC-CCCSEEEECCCCSSSST
T ss_pred EEE---CchHH--cC-CCCCEEEEcCCCccccC
Confidence 333 45543 23 58999999888887653
No 253
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=94.02 E-value=0.039 Score=52.84 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=23.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..++. .+ ...+|+..|+..
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~------------------~~~~V~~vD~s~ 226 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK------------------NAKKIYAIDINP 226 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT------------------TSSEEEEEESCH
T ss_pred CCCEEEEccCccCHHHHh-cc------------------CCCEEEEEECCH
Confidence 357999999999998862 11 127899999854
No 254
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=94.01 E-value=0.72 Score=49.49 Aligned_cols=24 Identities=25% Similarity=0.209 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhccCceEEEEeec
Q 017747 202 FTLFLRSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 202 ~~~FL~~Ra~EL~~GG~lvl~~~g 225 (366)
...|+..-.+-|++||++++.++.
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHHHhcCCCcEEEEEECh
Confidence 567899999999999999999853
No 255
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=93.69 E-value=0.043 Score=50.69 Aligned_cols=19 Identities=26% Similarity=0.309 Sum_probs=16.3
Q ss_pred CceEEEeecCCCCcchHHH
Q 017747 50 KTINIADLGCSSGPNTLAI 68 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~ 68 (366)
...+|+|+|||+|..|..+
T Consensus 29 ~~~~VLEIG~G~G~lt~~L 47 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYL 47 (255)
T ss_dssp TTCEEEEECCTTTTTHHHH
T ss_pred CcCEEEEEcccccHHHHHH
Confidence 3578999999999999864
No 256
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=93.68 E-value=0.26 Score=45.48 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=19.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHH
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDF 72 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~i 72 (366)
.++.+|+|+|||+|.|++.++...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHH
Confidence 357999999999999998765544
No 257
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=93.56 E-value=0.026 Score=52.80 Aligned_cols=63 Identities=8% Similarity=-0.049 Sum_probs=37.8
Q ss_pred CCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcce
Q 017747 13 TGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFH 92 (366)
Q Consensus 13 ~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~ 92 (366)
....+|.+|-..+..++.++...+. .... +|+|+|||+|..|..+ .++ + .+
T Consensus 20 ~~~k~~GQnfL~d~~i~~~Iv~~~~----------~~~~-~VLEIG~G~G~lt~~L--------~~~-----~-----~~ 70 (271)
T 3fut_A 20 FADKRFGQNFLVSEAHLRRIVEAAR----------PFTG-PVFEVGPGLGALTRAL--------LEA-----G-----AE 70 (271)
T ss_dssp CCSTTSSCCEECCHHHHHHHHHHHC----------CCCS-CEEEECCTTSHHHHHH--------HHT-----T-----CC
T ss_pred CccccCCccccCCHHHHHHHHHhcC----------CCCC-eEEEEeCchHHHHHHH--------HHc-----C-----CE
Confidence 3344666665555555554332221 1234 9999999999999753 221 1 57
Q ss_pred EEecCCCCCchh
Q 017747 93 FYLNDLPTNDFN 104 (366)
Q Consensus 93 v~~nDLp~NDFn 104 (366)
|+..|+-.....
T Consensus 71 V~avEid~~~~~ 82 (271)
T 3fut_A 71 VTAIEKDLRLRP 82 (271)
T ss_dssp EEEEESCGGGHH
T ss_pred EEEEECCHHHHH
Confidence 888888664333
No 258
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=93.43 E-value=0.34 Score=49.64 Aligned_cols=145 Identities=13% Similarity=0.187 Sum_probs=69.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS 128 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~ 128 (366)
+.+.+|+|.+||||...+.+...+.+.-.+..... .......+++..|+-..-..-.-..+ .. .|. ..+
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~-~~~~~~~~i~G~Eid~~~~~lA~~Nl--~l------~gi--~~~ 311 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNA-SEQKKQISVYGQESNPTTWKLAAMNM--VI------RGI--DFN 311 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCH-HHHGGGEEEEECCCCHHHHHHHHHHH--HH------TTC--CCB
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccch-HHHhhhceEEEEeCCHHHHHHHHHHH--HH------hCC--Ccc
Confidence 44569999999999887665555433221110000 00001378899988432221111111 00 111 111
Q ss_pred eEEeccCCCcc-cccCCCCcccEEEcc--ccc-ccccCCCCcccccccCCCccc-----cEEEcCCCCHHHHHHHHHHHH
Q 017747 129 VYIAGYPGSFY-GRLFPNNSLHFIHSS--NSL-HWLSKVPPTLYNEMGESINKG-----NIYISESSPSAVSKAYFKQFQ 199 (366)
Q Consensus 129 ~f~~~vpgSFy-~~lfp~~s~~~~~S~--~al-hWls~~p~~~~~~~~~~~nkg-----~i~~~~~s~~~v~~ay~~Q~~ 199 (366)
+....|+++ ...++...+|+++++ +.. .|-.. .+... +-+.-| ...+..++.
T Consensus 312 --i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~---~~~~d--~r~~~g~~~~~~~~~~~~~~------------ 372 (544)
T 3khk_A 312 --FGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHE---KLADD--PRWTINTNGEKRILTPPTGN------------ 372 (544)
T ss_dssp --CCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCG---GGTTC--GGGEECCC--CEECCCCTTC------------
T ss_pred --cceeccchhcCcccccccccEEEECCCcCCccccch---hhhhh--hhhhcCcccccccccCCCcc------------
Confidence 111334443 444677899999996 222 24321 11000 000000 000001111
Q ss_pred HHHHHHHHHHHHHhccCceEEEEee
Q 017747 200 EDFTLFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.|+ .|+..-.+-|+|||++++.++
T Consensus 373 ~~~-~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 373 ANF-AWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp THH-HHHHHHHHTEEEEEEEEEEEE
T ss_pred hhH-HHHHHHHHHhccCceEEEEec
Confidence 122 588888999999999999985
No 259
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=93.40 E-value=0.034 Score=54.34 Aligned_cols=25 Identities=12% Similarity=0.053 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhccCceEEEEee
Q 017747 200 EDFTLFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 200 ~D~~~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
+++..++..-.+-|+|||.++++..
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4566777888899999999999864
No 260
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=93.12 E-value=0.11 Score=51.47 Aligned_cols=34 Identities=15% Similarity=0.049 Sum_probs=24.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..++.+ .+. ..+|+..|+...
T Consensus 290 ~~~~VLDlgcG~G~~sl~l--------a~~----------~~~V~gvD~s~~ 323 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYL--------AKR----------GFNVKGFDSNEF 323 (425)
T ss_dssp CSSEEEEETCTTTHHHHHH--------HHT----------TCEEEEEESCHH
T ss_pred CCCEEEEeeccchHHHHHH--------HHc----------CCEEEEEECCHH
Confidence 3579999999999999753 221 157889998643
No 261
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=92.65 E-value=0.34 Score=49.62 Aligned_cols=133 Identities=15% Similarity=0.159 Sum_probs=68.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCce
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPSV 129 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~~ 129 (366)
...+|+|.+||||...+.+...+ . .....+++..|+-..-..-.-..+ .. .|.. ..+.
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l------------~-~~~~~~i~G~Eid~~~~~lA~~Nl--~l------~gi~-~~~~ 278 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYS------------R-QPQTVVYFGQELNTSTYNLARMNM--IL------HGVP-IENQ 278 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHC------------S-CTTTCEEEEEESCHHHHHHHHHHH--HH------TTCC-GGGE
T ss_pred CCCEEeecccchhHHHHHHHHHH------------H-hccCceEEEEECcHHHHHHHHHHH--HH------cCCC-cCcc
Confidence 35799999999999876543322 1 122488999998543222221111 00 1110 0111
Q ss_pred EEeccCCCcccc---cCCCCcccEEEcc--cccccccCCCCcccccccCCCc-cccEEEcCCCCHHHHHHHHHHHHHHHH
Q 017747 130 YIAGYPGSFYGR---LFPNNSLHFIHSS--NSLHWLSKVPPTLYNEMGESIN-KGNIYISESSPSAVSKAYFKQFQEDFT 203 (366)
Q Consensus 130 f~~~vpgSFy~~---lfp~~s~~~~~S~--~alhWls~~p~~~~~~~~~~~n-kg~i~~~~~s~~~v~~ay~~Q~~~D~~ 203 (366)
....|+++.. .++...+|+++++ +...|-.. .....+ +-|. -|.+ ...+ ..|+
T Consensus 279 --~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~-~~~~~d---~rf~~~G~~--~~~s------------~~~~- 337 (542)
T 3lkd_A 279 --FLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSAS-SGFMDD---PRFSPFGKL--APKS------------KADF- 337 (542)
T ss_dssp --EEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCC-GGGGGS---TTTGGGSSC--CCTT------------CCHH-
T ss_pred --ceEecceecccccccccccccEEEecCCcCCccccc-hhhhhh---hhhhhhhhc--CCCc------------hhhH-
Confidence 1122455443 2567889999997 44455211 000001 0010 0100 0011 1133
Q ss_pred HHHHHHHHHhc-cCceEEEEeec
Q 017747 204 LFLRSRSEELV-VGGRMVLILLG 225 (366)
Q Consensus 204 ~FL~~Ra~EL~-~GG~lvl~~~g 225 (366)
.|+..-.+-|+ |||++++.++.
T Consensus 338 ~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 338 AFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp HHHHHHHHTBCTTTCEEEEEEET
T ss_pred HHHHHHHHHhCCCceeEEEEecc
Confidence 48888889999 99999999853
No 262
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=92.47 E-value=0.2 Score=46.87 Aligned_cols=35 Identities=11% Similarity=0.029 Sum_probs=25.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|+.|+.+ .++ | ..+|+.+|+-..
T Consensus 125 ~g~~VlD~~aG~G~~~i~~--------a~~-----g----~~~V~avD~np~ 159 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPI--------AVY-----G----KAKVIAIEKDPY 159 (278)
T ss_dssp TTCEEEETTCTTTTTTHHH--------HHH-----T----CCEEEEECCCHH
T ss_pred CCCEEEEecCcCcHHHHHH--------HHh-----c----CCeEEEEECCHH
Confidence 3579999999999999853 121 2 157999998654
No 263
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=92.30 E-value=0.039 Score=50.06 Aligned_cols=34 Identities=15% Similarity=0.175 Sum_probs=25.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
...+|+|+|||+|..|..+ .++ + .+|+..|+...
T Consensus 29 ~~~~VLDiG~G~G~~~~~l--------~~~-----~-----~~v~~id~~~~ 62 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKL--------AKI-----S-----KQVTSIELDSH 62 (245)
T ss_dssp SSEEEEECSCCCSSCSHHH--------HHH-----S-----SEEEESSSSCS
T ss_pred CCCEEEEEeCCCCHHHHHH--------HHh-----C-----CeEEEEECCHH
Confidence 4579999999999999853 222 1 56888887654
No 264
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=91.16 E-value=0.14 Score=49.95 Aligned_cols=36 Identities=17% Similarity=0.101 Sum_probs=25.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
+++.+|+|+|||+|..+..+ + + ..+ .+|...|+-..
T Consensus 187 p~pkrVL~IGgG~G~~arel-------l-k--------~~~-~~Vt~VEID~~ 222 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEI-------V-K--------LKP-KMVTMVEIDQM 222 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHH-------H-T--------TCC-SEEEEEESCHH
T ss_pred CCCCEEEEEECChhHHHHHH-------H-H--------CCC-CEEEEEECCHH
Confidence 56899999999999976531 1 1 123 67888888553
No 265
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=91.00 E-value=0.57 Score=43.91 Aligned_cols=20 Identities=20% Similarity=0.234 Sum_probs=16.8
Q ss_pred HHHHHHHhccC--ceEEEEeec
Q 017747 206 LRSRSEELVVG--GRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~G--G~lvl~~~g 225 (366)
|..-.+-|+|| |.||+-++.
T Consensus 182 L~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 182 LNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp HHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHHHHHcCCCCCCcEEEEEec
Confidence 66667889999 999998875
No 266
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=90.84 E-value=0.11 Score=51.55 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=24.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..++.+ .+ . ..+|+..|...
T Consensus 286 ~~~~VLDlgcG~G~~~~~l--------a~---------~-~~~V~gvD~s~ 318 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPL--------AT---------Q-AASVVGVEGVP 318 (433)
T ss_dssp TTCEEEEESCTTTTTHHHH--------HT---------T-SSEEEEEESCH
T ss_pred CCCEEEECCCCCCHHHHHH--------Hh---------h-CCEEEEEeCCH
Confidence 3478999999999999753 11 1 26789999864
No 267
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=90.59 E-value=0.68 Score=43.75 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=27.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchh
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFN 104 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn 104 (366)
..+|+|+|||+|.-|+.+...+ .+.-+|+.+|+......
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~---------------~~~g~V~a~D~~~~~l~ 141 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALL---------------KNQGKIFAFDLDAKRLA 141 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHH---------------TTCSEEEEEESCHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHHh---------------CCCCEEEEEeCCHHHHH
Confidence 4799999999999998643322 12378999998654333
No 268
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=90.09 E-value=0.15 Score=49.74 Aligned_cols=35 Identities=17% Similarity=0.278 Sum_probs=25.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
..+|+|+|||+|..++.+...+ +..+|+.+|+-..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~----------------~~~~V~avDi~~~ 82 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET----------------PAEEVWLNDISED 82 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS----------------SCSEEEEEESCHH
T ss_pred CCEEEECCCchhHHHHHHHHhC----------------CCCeEEEEECCHH
Confidence 5789999999999998632221 2267999998653
No 269
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=90.01 E-value=0.67 Score=45.20 Aligned_cols=71 Identities=11% Similarity=0.121 Sum_probs=45.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCCc-
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSPS- 128 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~~- 128 (366)
.-.+++|+|||.|.-|..+ .++ ...|+..|.-. + ...+.. .++
T Consensus 211 ~G~~vlDLGAaPGGWT~~l--------~~r----------g~~V~aVD~~~---------l---~~~l~~------~~~V 254 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQL--------VKR----------NMWVYSVDNGP---------M---AQSLMD------TGQV 254 (375)
T ss_dssp TTCEEEEETCTTCHHHHHH--------HHT----------TCEEEEECSSC---------C---CHHHHT------TTCE
T ss_pred CCCEEEEeCcCCCHHHHHH--------HHC----------CCEEEEEEhhh---------c---Chhhcc------CCCe
Confidence 3589999999999999642 221 16899999632 1 111111 223
Q ss_pred eEEeccCCCcccccCCCCcccEEEccccccc
Q 017747 129 VYIAGYPGSFYGRLFPNNSLHFIHSSNSLHW 159 (366)
Q Consensus 129 ~f~~~vpgSFy~~lfp~~s~~~~~S~~alhW 159 (366)
.|+ .++.+....+.+.+|+++|-.+.+|
T Consensus 255 ~~~---~~d~~~~~~~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 255 TWL---REDGFKFRPTRSNISWMVCDMVEKP 282 (375)
T ss_dssp EEE---CSCTTTCCCCSSCEEEEEECCSSCH
T ss_pred EEE---eCccccccCCCCCcCEEEEcCCCCh
Confidence 333 3566666667778999999777654
No 270
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=89.82 E-value=0.076 Score=49.71 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=26.6
Q ss_pred chHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHH
Q 017747 16 TSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAI 68 (366)
Q Consensus 16 ~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~ 68 (366)
.+|.+|-..+..++..+...+. .....+|+|+|||+|..|..+
T Consensus 18 k~~GQ~fL~d~~i~~~iv~~~~----------~~~~~~VLEIG~G~G~lt~~L 60 (279)
T 3uzu_A 18 KRFGQNFLVDHGVIDAIVAAIR----------PERGERMVEIGPGLGALTGPV 60 (279)
T ss_dssp CCCSCCEECCHHHHHHHHHHHC----------CCTTCEEEEECCTTSTTHHHH
T ss_pred ccCCccccCCHHHHHHHHHhcC----------CCCcCEEEEEccccHHHHHHH
Confidence 3555555555555544332221 123579999999999999864
No 271
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=89.07 E-value=1.9 Score=40.70 Aligned_cols=20 Identities=15% Similarity=0.089 Sum_probs=17.0
Q ss_pred HHHHHHHhccC-ceEEEEeec
Q 017747 206 LRSRSEELVVG-GRMVLILLG 225 (366)
Q Consensus 206 L~~Ra~EL~~G-G~lvl~~~g 225 (366)
|..-.+-|+|| |.||+-++-
T Consensus 173 L~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 173 LENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp HHHHHHHCCTTCCEEEEEESS
T ss_pred HHHHHHHhcCCCCcEEEEecc
Confidence 66667889999 999999875
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=88.64 E-value=0.57 Score=47.82 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=18.5
Q ss_pred HHHHHHHHHhccCceEEEEee
Q 017747 204 LFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
.|+..-.+-|+|||++++.++
T Consensus 293 ~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 293 CFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp HHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEec
Confidence 578888899999999999975
No 273
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=87.00 E-value=2 Score=41.68 Aligned_cols=20 Identities=20% Similarity=0.212 Sum_probs=16.4
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 017747 51 TINIADLGCSSGPNTLAIIK 70 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~ 70 (366)
..+|+|.|||+|...+.+..
T Consensus 196 ~~~vlDp~CGSGt~lieaa~ 215 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAM 215 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHH
Confidence 47899999999998876543
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=86.35 E-value=0.052 Score=49.87 Aligned_cols=34 Identities=18% Similarity=0.297 Sum_probs=24.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
...+|+|+|||+|..|..+ .+ .+..+|+.-|+-.
T Consensus 31 ~~~~VLDiG~G~G~lt~~L--------~~---------~~~~~v~avEid~ 64 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVL--------LQ---------HPLKKLYVIELDR 64 (249)
T ss_dssp TTCEEEEEESCHHHHHHHH--------TT---------SCCSEEEEECCCH
T ss_pred CcCEEEEEcCchHHHHHHH--------HH---------cCCCeEEEEECCH
Confidence 3578999999999998742 11 1236888889854
No 275
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=83.80 E-value=2.1 Score=41.78 Aligned_cols=21 Identities=19% Similarity=0.180 Sum_probs=16.4
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 017747 50 KTINIADLGCSSGPNTLAIIK 70 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~ 70 (366)
...+|+|.|||+|...+....
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~ 221 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAAL 221 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHH
Confidence 347899999999988775443
No 276
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=83.40 E-value=3 Score=40.53 Aligned_cols=20 Identities=20% Similarity=0.275 Sum_probs=16.0
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 017747 51 TINIADLGCSSGPNTLAIIK 70 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~ 70 (366)
...|+|.+||+|...+....
T Consensus 195 ~~~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHH
Confidence 47899999999988775543
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=81.55 E-value=1.9 Score=45.58 Aligned_cols=71 Identities=20% Similarity=0.247 Sum_probs=39.4
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCC
Q 017747 19 ARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDL 98 (366)
Q Consensus 19 ~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDL 98 (366)
.+....|+++..+++.+..+ ..+..+|+|+|||+|+.++..+...-.+ ..+.+. +.......||..+-
T Consensus 387 vRy~~Y~~AI~~al~d~~~~---------~~~~~VVldVGaGtGpLs~~al~A~~~a-~~~~~~--~~~~~~~kVyAVEk 454 (745)
T 3ua3_A 387 IKYDVYGEAVVGALKDLGAD---------GRKTVVIYLLGGGRGPIGTKILKSEREY-NNTFRQ--GQESLKVKLYIVEK 454 (745)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---------CCSEEEEEEESCTTCHHHHHHHHHHHHH-HHHHST--TSCCCEEEEEEEEC
T ss_pred hhHHHHHHHHHHHHHHhhcc---------cCCCcEEEEECCCCCHHHHHHHHHHHHh-Cccccc--cccccccEEEEEeC
Confidence 35556666665554443321 1246789999999999987644443211 111111 11222378999887
Q ss_pred CCC
Q 017747 99 PTN 101 (366)
Q Consensus 99 p~N 101 (366)
..|
T Consensus 455 np~ 457 (745)
T 3ua3_A 455 NPN 457 (745)
T ss_dssp CHH
T ss_pred ChH
Confidence 443
No 278
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=80.97 E-value=1.3 Score=37.65 Aligned_cols=34 Identities=9% Similarity=0.148 Sum_probs=24.5
Q ss_pred CceEEEeecCCCCc-chHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 50 KTINIADLGCSSGP-NTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 50 ~~~~IaDlGCs~G~-ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
.+.+|+|+|||.|. |+.. |.+. ..+.|+..|+-.
T Consensus 35 ~~~rVlEVG~G~g~~vA~~--------La~~---------~g~~V~atDInp 69 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDY--------IRKH---------SKVDLVLTDIKP 69 (153)
T ss_dssp SSSEEEEETCTTCCHHHHH--------HHHH---------SCCEEEEECSSC
T ss_pred CCCcEEEEccCCChHHHHH--------HHHh---------CCCeEEEEECCc
Confidence 45799999999995 8864 4331 127888888753
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=79.05 E-value=1.1 Score=41.04 Aligned_cols=16 Identities=13% Similarity=0.088 Sum_probs=14.5
Q ss_pred ceEEEeecCCCCcchH
Q 017747 51 TINIADLGCSSGPNTL 66 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~ 66 (366)
..+|+|+|||+|..|.
T Consensus 22 ~~~VLEIG~G~G~lt~ 37 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE 37 (252)
T ss_dssp TCCEEEECCTTTTTHH
T ss_pred cCEEEEECCCCcHHHH
Confidence 4689999999999996
No 280
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=77.74 E-value=1.2 Score=41.89 Aligned_cols=37 Identities=19% Similarity=0.186 Sum_probs=26.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCch
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDF 103 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDF 103 (366)
..+|+|+|||+|..|+.+. ++ .|..+|+..|+.....
T Consensus 27 g~~vLD~g~G~G~~s~~la--------~~--------~~~~~VigvD~d~~al 63 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAIL--------EH--------CPGCRIIGIDVDSEVL 63 (301)
T ss_dssp TCEEEETTCTTSHHHHHHH--------HH--------CTTCEEEEEESCHHHH
T ss_pred CCEEEEEeCCcCHHHHHHH--------HH--------CCCCEEEEEECCHHHH
Confidence 4799999999999998532 22 1236888888865433
No 281
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=75.75 E-value=4.8 Score=37.29 Aligned_cols=27 Identities=30% Similarity=0.503 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHhccCceEEEEee
Q 017747 198 FQEDFTLFLRSRSEELVVGGRMVLILL 224 (366)
Q Consensus 198 ~~~D~~~FL~~Ra~EL~~GG~lvl~~~ 224 (366)
+-.++..+++.-.+-|+|||.+++...
T Consensus 72 ~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 72 FLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 445566777888899999999999874
No 282
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=71.99 E-value=1.3 Score=40.67 Aligned_cols=32 Identities=6% Similarity=0.052 Sum_probs=23.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPT 100 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~ 100 (366)
..+|+|+|||+|..|+.+ .+. ..+|+..|...
T Consensus 84 ~~~VLDlgcG~G~~a~~l--------A~~----------g~~V~~vD~s~ 115 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVL--------ASL----------GLTVTAFEQHP 115 (258)
T ss_dssp CCCEEETTCTTCHHHHHH--------HHT----------TCCEEEEECCH
T ss_pred cCeEEEeeCccCHHHHHH--------HHh----------CCEEEEEECCh
Confidence 468999999999999853 221 15788888854
No 283
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=71.13 E-value=8.9 Score=40.23 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=16.4
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 017747 50 KTINIADLGCSSGPNTLAIIK 70 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~ 70 (366)
...+|+|.+||||...+....
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~ 210 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAM 210 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHH
Confidence 346899999999998775443
No 284
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=70.82 E-value=21 Score=33.45 Aligned_cols=119 Identities=13% Similarity=0.098 Sum_probs=63.9
Q ss_pred CCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCchhHHHhhCchhHHHHhhhcCCCCCC
Q 017747 48 DPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDFNSVFKALPDFHRQLRNERGGGSSP 127 (366)
Q Consensus 48 ~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDFn~lf~~l~~~~~~~~~~~~~~~~~ 127 (366)
.+++-+|+=+|-|.|..... +.+ -++..++...|+-..=-...-+-+|.......+ .+
T Consensus 81 ~p~pk~VLIiGgGdG~~~re--------vlk--------~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~------dp 138 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLRE--------VTR--------HKNVESITMVEIDAGVVSFCRQYLPNHNAGSYD------DP 138 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHH--------HHT--------CTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG------CT
T ss_pred CCCCCeEEEECCCchHHHHH--------HHH--------cCCcceEEEEcCCHHHHHHHHhcCccccccccC------CC
Confidence 36789999999999986532 111 123356777777432111111223221111000 22
Q ss_pred ce-EEeccCCCcccccCCCCcccEEEcccccccccCCCCcccccccCCCccccEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 017747 128 SV-YIAGYPGSFYGRLFPNNSLHFIHSSNSLHWLSKVPPTLYNEMGESINKGNIYISESSPSAVSKAYFKQFQEDFTLFL 206 (366)
Q Consensus 128 ~~-f~~~vpgSFy~~lfp~~s~~~~~S~~alhWls~~p~~~~~~~~~~~nkg~i~~~~~s~~~v~~ay~~Q~~~D~~~FL 206 (366)
++ -+.+-+..|-++ .++++|+++.-.+=.+ ..+..+.. ..|+
T Consensus 139 Rv~v~~~Dg~~~l~~--~~~~yDvIi~D~~dp~--~~~~~L~t---------------------------------~eFy 181 (294)
T 3o4f_A 139 RFKLVIDDGVNFVNQ--TSQTFDVIISDCTDPI--GPGESLFT---------------------------------SAFY 181 (294)
T ss_dssp TEEEEESCTTTTTSC--SSCCEEEEEESCCCCC--CTTCCSSC---------------------------------CHHH
T ss_pred cEEEEechHHHHHhh--ccccCCEEEEeCCCcC--CCchhhcC---------------------------------HHHH
Confidence 32 344455555443 5678999987654222 01111111 1467
Q ss_pred HHHHHHhccCceEEEEeec
Q 017747 207 RSRSEELVVGGRMVLILLG 225 (366)
Q Consensus 207 ~~Ra~EL~~GG~lvl~~~g 225 (366)
+...+-|+|||.|+.....
T Consensus 182 ~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 182 EGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp HHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHhCCCCEEEEecCC
Confidence 7889999999999987543
No 285
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=62.99 E-value=5.3 Score=38.21 Aligned_cols=17 Identities=29% Similarity=0.499 Sum_probs=14.8
Q ss_pred ceEEEeecCCCCcchHH
Q 017747 51 TINIADLGCSSGPNTLA 67 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~ 67 (366)
..+|+|+|||+|..|+.
T Consensus 214 ~~~vLDl~cG~G~~~l~ 230 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLA 230 (369)
T ss_dssp CSEEEEESCTTSHHHHH
T ss_pred CCEEEEccCCCCHHHHH
Confidence 35799999999999974
No 286
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=57.98 E-value=6.8 Score=36.00 Aligned_cols=35 Identities=14% Similarity=0.005 Sum_probs=24.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
..+|+|||||.|..|... .. .... -.|+.-|+-..
T Consensus 79 g~~VvDLGaapGGWSq~~--------a~-------~~g~-~~V~avdvG~~ 113 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYC--------AG-------LKKV-TEVRGYTKGGP 113 (267)
T ss_dssp CEEEEEESCTTSHHHHHH--------HT-------STTE-EEEEEECCCST
T ss_pred CCEEEEcCCCCCcHHHHH--------HH-------hcCC-CEEEEEecCCC
Confidence 469999999999999631 11 1222 47999999654
No 287
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=56.86 E-value=3.9 Score=40.24 Aligned_cols=17 Identities=24% Similarity=0.304 Sum_probs=14.9
Q ss_pred ceEEEeecCCCCcchHH
Q 017747 51 TINIADLGCSSGPNTLA 67 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~ 67 (366)
..+|+|+|||+|..++.
T Consensus 94 g~~VLDLgcG~G~~al~ 110 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIA 110 (410)
T ss_dssp TCEEEESSCSSSHHHHH
T ss_pred CCEEEEeCCCchHHHHH
Confidence 46899999999999874
No 288
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=55.45 E-value=6.7 Score=37.12 Aligned_cols=35 Identities=14% Similarity=0.089 Sum_probs=24.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCC
Q 017747 51 TINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTN 101 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~N 101 (366)
..+|+|||||.|..|... . ..... -.|+.-|+-.+
T Consensus 95 ~~~VlDLGaapGGwsq~~--------~-------~~~gv-~~V~avdvG~~ 129 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYM--------A-------TQKRV-QEVRGYTKGGP 129 (321)
T ss_dssp CEEEEEETCTTCHHHHHH--------T-------TCTTE-EEEEEECCCST
T ss_pred CCEEEEeCCCCCcHHHHH--------H-------hhcCC-CEEEEEEcCCC
Confidence 469999999999999631 0 11222 46999999766
No 289
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=51.86 E-value=5.3 Score=36.65 Aligned_cols=17 Identities=12% Similarity=0.343 Sum_probs=15.3
Q ss_pred eEEEeecCCCCcchHHH
Q 017747 52 INIADLGCSSGPNTLAI 68 (366)
Q Consensus 52 ~~IaDlGCs~G~ns~~~ 68 (366)
.+|+|+|||+|..++.+
T Consensus 90 ~~VLDl~~G~G~dal~l 106 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVL 106 (258)
T ss_dssp CCEEETTCTTCHHHHHH
T ss_pred CEEEEcCCcCCHHHHHH
Confidence 78999999999999863
No 290
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=50.35 E-value=10 Score=35.03 Aligned_cols=36 Identities=11% Similarity=-0.131 Sum_probs=24.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCch
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDF 103 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDF 103 (366)
..-+|+|++||+|..++.+ .+. | ..++..|+....+
T Consensus 235 ~~~~vlD~f~GsGt~~~~a--------~~~-----g-----~~~~g~e~~~~~~ 270 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAA--------ARW-----G-----RRALGVELVPRYA 270 (297)
T ss_dssp TTCEEEETTCTTTHHHHHH--------HHT-----T-----CEEEEEESCHHHH
T ss_pred CCCEEEECCCCCCHHHHHH--------HHc-----C-----CeEEEEeCCHHHH
Confidence 3468999999999987642 111 2 5788888876433
No 291
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=47.25 E-value=20 Score=34.85 Aligned_cols=67 Identities=13% Similarity=0.147 Sum_probs=39.7
Q ss_pred CCCcchHHHhhHHHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcc
Q 017747 12 GTGPTSYARNSSLQKKASDTVKHITLEALQQLYLEIDPKTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEF 91 (366)
Q Consensus 12 g~g~~sY~~nS~~Q~~~~~~~~~~l~~ai~~l~~~~~~~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~ 91 (366)
|.....|+-+...-|.....+...+.+. .....+|+|++||+|..++.+.+.. ...-
T Consensus 22 ~~~~~Ffn~~~~~nR~l~~~~~~~~~~~--------~~~g~~VLDlfaGtG~~sl~aa~~~---------------~ga~ 78 (392)
T 3axs_A 22 SDMPVFYNPRMRVNRDLAVLGLEYLCKK--------LGRPVKVADPLSASGIRAIRFLLET---------------SCVE 78 (392)
T ss_dssp TTCCSSCCGGGHHHHHHHHHHHHHHHHH--------HCSCEEEEESSCTTSHHHHHHHHHC---------------SCEE
T ss_pred CCCCEEEcCCcHHHHHHHHHHHHHHhhc--------cCCCCEEEECCCcccHHHHHHHHhC---------------CCCC
Confidence 3456688666665555543333222210 0134799999999999998632221 1116
Q ss_pred eEEecCCCCC
Q 017747 92 HFYLNDLPTN 101 (366)
Q Consensus 92 ~v~~nDLp~N 101 (366)
+|+.+|+-..
T Consensus 79 ~V~avDi~~~ 88 (392)
T 3axs_A 79 KAYANDISSK 88 (392)
T ss_dssp EEEEECSCHH
T ss_pred EEEEEECCHH
Confidence 7999998643
No 292
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=47.08 E-value=13 Score=35.12 Aligned_cols=24 Identities=33% Similarity=0.452 Sum_probs=19.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHH
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDF 72 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~i 72 (366)
..+++|+|+|=|+|.|.+..+..+
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~ 118 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHL 118 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCccHHHHHHHHHH
Confidence 457999999999999988755443
No 293
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=44.32 E-value=36 Score=32.63 Aligned_cols=25 Identities=16% Similarity=0.048 Sum_probs=19.6
Q ss_pred HHHHHHHHHhccCceEEEEeecCCC
Q 017747 204 LFLRSRSEELVVGGRMVLILLGRIG 228 (366)
Q Consensus 204 ~FL~~Ra~EL~~GG~lvl~~~g~~~ 228 (366)
.+|..=.+-|+|||+||-++..-..
T Consensus 265 ~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 265 QLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp HHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred HHHHHHHhcCCCCcEEEEEeCCCch
Confidence 4677777888999999999876543
No 294
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=41.97 E-value=28 Score=42.00 Aligned_cols=43 Identities=9% Similarity=0.187 Sum_probs=27.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHHhhhhhcCCCCcceEEecCCCCCch
Q 017747 50 KTINIADLGCSSGPNTLAIIKDFVQTVEMTSREILQNPAPEFHFYLNDLPTNDF 103 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~~~~~ii~~l~~~~~~~~~~~~p~~~v~~nDLp~NDF 103 (366)
..++|+++|.|+|..|..++..+ . ..+....+..+.|....-|
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l----~-------~~~~~~~~yt~td~s~~~~ 1282 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALL----N-------TQPVMDLDYTATDRNPQAL 1282 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHT----T-------TSSSCEEEEEEECSSSSST
T ss_pred CCceEEEECCCccHHHHHHHHhh----c-------ccCcccceEEEecCChHHH
Confidence 36899999999999876433222 1 1111235778888876544
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=38.17 E-value=10 Score=35.01 Aligned_cols=18 Identities=28% Similarity=0.482 Sum_probs=15.7
Q ss_pred CceEEEeecCCCCcchHH
Q 017747 50 KTINIADLGCSSGPNTLA 67 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~ 67 (366)
.-.+|+|||||-|.=|..
T Consensus 73 pg~~VVDLGaAPGGWSQv 90 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYY 90 (269)
T ss_dssp CCEEEEEETCTTSHHHHH
T ss_pred CCCEEEEcCCCCCHHHHH
Confidence 468999999999998864
No 296
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=31.45 E-value=24 Score=36.49 Aligned_cols=24 Identities=29% Similarity=0.519 Sum_probs=20.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHH
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDF 72 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~i 72 (366)
.++++|+|+|.|+|.|.+..++..
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~ 80 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDF 80 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCceEEEEecCchHHHHHHHHHHH
Confidence 357999999999999999876653
No 297
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=29.55 E-value=78 Score=30.62 Aligned_cols=21 Identities=19% Similarity=0.107 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhccCceEEEEe
Q 017747 203 TLFLRSRSEELVVGGRMVLIL 223 (366)
Q Consensus 203 ~~FL~~Ra~EL~~GG~lvl~~ 223 (366)
..|++...+-|+|||.|+...
T Consensus 311 ~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 311 RLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEec
Confidence 457788889999999998864
No 298
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=28.08 E-value=71 Score=29.43 Aligned_cols=19 Identities=11% Similarity=0.149 Sum_probs=16.4
Q ss_pred CCceEEEeecCCCCcchHH
Q 017747 49 PKTINIADLGCSSGPNTLA 67 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~ 67 (366)
..+-.|+++||+.|..++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ 123 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACIL 123 (282)
T ss_dssp TCCCEEEEECCTTSHHHHH
T ss_pred CCCCcEEEeecCchHHHHH
Confidence 4578999999999998875
No 299
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=26.32 E-value=38 Score=31.53 Aligned_cols=20 Identities=10% Similarity=0.008 Sum_probs=16.7
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 017747 51 TINIADLGCSSGPNTLAIIK 70 (366)
Q Consensus 51 ~~~IaDlGCs~G~ns~~~~~ 70 (366)
..+++|.+||.|.-|..+++
T Consensus 23 gg~~VD~T~G~GGHS~~il~ 42 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILE 42 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHH
Confidence 46899999999999986543
No 300
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=25.91 E-value=45 Score=29.22 Aligned_cols=41 Identities=15% Similarity=0.123 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhh
Q 017747 239 FWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 239 ~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~ 282 (366)
+|+-+-+-++.|+++|.|+++.. ..-.+..+++|+.+.+++
T Consensus 158 fw~~l~~~l~~~~~~Gfi~~~~~---~~i~~~d~~~e~~~~l~~ 198 (199)
T 3qua_A 158 HYDGLLTWLRGLVPTGYVSQRAM---DSLVVVDNVEAALEACAP 198 (199)
T ss_dssp TTHHHHHHHHHTTTTTSSCHHHH---HTSEEESSHHHHHHHHSC
T ss_pred cchHHHHHHHHHHHCCCCCHHHC---CeEEEeCCHHHHHHHHhc
Confidence 57777777889999999999865 455678999999988875
No 301
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=23.29 E-value=40 Score=34.66 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=20.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHH
Q 017747 49 PKTINIADLGCSSGPNTLAIIKDF 72 (366)
Q Consensus 49 ~~~~~IaDlGCs~G~ns~~~~~~i 72 (366)
...++|+|+|-|+|.|.+..+...
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~ 88 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAF 88 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCceEEEEeCCchHHHHHHHHHHH
Confidence 357999999999999999876654
No 302
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=22.82 E-value=95 Score=27.44 Aligned_cols=41 Identities=29% Similarity=0.369 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHhh
Q 017747 239 FWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 239 ~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~~ 282 (366)
+|+-+-.-++.|+++|.|+++..+ .-.+..+++|+.+.+++
T Consensus 172 ~w~~l~~~l~~~~~~Gfi~~~~~~---~~~~~~~~~e~~~~l~~ 212 (217)
T 1wek_A 172 YWEGLVRWLAFLRDQKAVGPEDLQ---LFRLTDEPEEVVQALKA 212 (217)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTGGG---GSEEESCHHHHHHHHHC
T ss_pred cchhHHHHHHHHHHCCCCCHHHcC---eEEEeCCHHHHHHHHHH
Confidence 677777777999999999998765 44788999999988874
No 303
>2v1n_A KIN17, protein KIN homolog; nuclear protein, winged helix motif; NMR {Homo sapiens}
Probab=22.71 E-value=59 Score=25.93 Aligned_cols=72 Identities=22% Similarity=0.275 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhccCceEEEEeecCCCCCCCCCCchhHHHHHHHHHHHHHHcCccchhhhcccCc
Q 017747 187 PSAVSKAYFKQFQEDFTLFLRSRSEELVVGGRMVLILLGRIGPDHVDRGNSFFWELLSRSLAILVSQGEIEKEKLVAYHA 266 (366)
Q Consensus 187 ~~~v~~ay~~Q~~~D~~~FL~~Ra~EL~~GG~lvl~~~g~~~~~~~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~ 266 (366)
|..+.+.|.+||++||...|+.|..+=+. ......++.+.+- .--.||.
T Consensus 12 ~~k~i~~fS~eF~~~Fl~lLr~~~g~krV--------------------------~aN~vYnEyI~dk-----~HiHMNa 60 (111)
T 2v1n_A 12 PQQFMDYFSEEFRNDFLELLRRRFGTKRV--------------------------HNNIVYNEYISHR-----EHIHMNA 60 (111)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHTSSCEE--------------------------EHHHHHHHHTTSS-----CCCCGGG
T ss_pred HhhHHHHHHHHHHHHHHHHHHHhcCCcEe--------------------------ehhHHHHHHhccc-----ccccccc
Confidence 44578999999999999999998643211 1234444443221 1123333
Q ss_pred cccCCCHHHHHHHHhhcCceEEee
Q 017747 267 HFYAPSKEEIEGEVGREGSFKLDQ 290 (366)
Q Consensus 267 P~y~ps~eEv~~~i~~~gsf~i~~ 290 (366)
.-..|.-|+-..+-.+|--+|+.
T Consensus 61 -T~W~tLT~Fvk~Lgr~G~c~V~e 83 (111)
T 2v1n_A 61 -TQWETLTDFTKWLGREGLCKVDE 83 (111)
T ss_dssp -SSCSSHHHHHHHHTTTTSEEEEE
T ss_pred -cccccHHHHHHHhccCCeEEEec
Confidence 34567777777777777555543
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=20.97 E-value=66 Score=28.70 Aligned_cols=18 Identities=17% Similarity=0.102 Sum_probs=14.8
Q ss_pred CceEEEeecCCCCcchHH
Q 017747 50 KTINIADLGCSSGPNTLA 67 (366)
Q Consensus 50 ~~~~IaDlGCs~G~ns~~ 67 (366)
..-.|+|..||+|-.++.
T Consensus 212 ~~~~vlD~f~GsGtt~~~ 229 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIV 229 (260)
T ss_dssp TTCEEEESSCTTCHHHHH
T ss_pred CCCEEEECCCCCCHHHHH
Confidence 457899999999998763
No 305
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=20.64 E-value=43 Score=25.51 Aligned_cols=41 Identities=17% Similarity=0.283 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHcCccchh----hhcccCccccCCCHHHHHHHHhh
Q 017747 242 LLSRSLAILVSQGEIEKE----KLVAYHAHFYAPSKEEIEGEVGR 282 (366)
Q Consensus 242 ~l~~al~~mv~eG~i~~e----~~d~f~~P~y~ps~eEv~~~i~~ 282 (366)
.+..++..|..+|+|... .-....+..|..+.+++...++.
T Consensus 49 tV~~~L~~L~~~GlV~~~~~~~~~~g~~v~~~~~~~~~i~~~~~~ 93 (110)
T 1q1h_A 49 DVRKKLNLLEEQGFVSYRKTRDKDSGWFIYYWKPNIDQINEILLN 93 (110)
T ss_dssp HHHHHHHHHHHHTSCEEEEEC---CCCCEEEEECTHHHHC-----
T ss_pred HHHHHHHHHHHCCCEEEEecccCCCceEEEEeecCHHHHHHHHHH
Confidence 589999999999999876 33444455557888888777653
No 306
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=20.61 E-value=81 Score=27.34 Aligned_cols=40 Identities=10% Similarity=0.135 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHcCccchhhhcccCccccCCCHHHHHHHHh
Q 017747 239 FWELLSRSLAILVSQGEIEKEKLVAYHAHFYAPSKEEIEGEVG 281 (366)
Q Consensus 239 ~~~~l~~al~~mv~eG~i~~e~~d~f~~P~y~ps~eEv~~~i~ 281 (366)
+|+-+-+-++.|+++|.|+++..+ .-.+..+++|+.+.|+
T Consensus 149 fw~~l~~~l~~~~~~Gfi~~~~~~---~i~~~d~~ee~~~~l~ 188 (189)
T 3sbx_A 149 HFDGLRAWLSELADTGYVSRTAME---RLIVVDNLDDALQACA 188 (189)
T ss_dssp TTHHHHHHHHHHHHTTSSCHHHHH---HEEEESSHHHHHHHHC
T ss_pred cchHHHHHHHHHHHCCCCCHHHcC---eEEEeCCHHHHHHHhc
Confidence 677777777899999999998654 4557889999888765
No 307
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=20.43 E-value=64 Score=24.00 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=25.1
Q ss_pred hcccCccccCCCHHHHHHHHh----hcCceEEeeEEE
Q 017747 261 LVAYHAHFYAPSKEEIEGEVG----REGSFKLDQLDM 293 (366)
Q Consensus 261 ~d~f~~P~y~ps~eEv~~~i~----~~gsf~i~~~e~ 293 (366)
..+|-+|+|..|.||-...-+ +.| |.+.+++-
T Consensus 44 ~~s~EVPV~A~sLdEAlE~AE~eYeeaG-F~V~RVRP 79 (84)
T 2lmc_A 44 EHSFEVPIYAETLDEALELAEWQYVPAG-FEVTRVRP 79 (84)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHTTGGGT-CEEEEEEE
T ss_pred cceEEEeeecccHHHHHHHHHHHhhhcc-ceEEEecc
Confidence 346789999999999888776 346 99887753
Done!