Query 017752
Match_columns 366
No_of_seqs 114 out of 143
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 04:22:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017752.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017752hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ugpa_ d.149.1.1 (A:) Cobalt- 63.1 1.7 0.00012 38.0 2.5 40 117-158 27-76 (203)
2 d1v29a_ d.149.1.1 (A:) Cobalt- 50.9 3 0.00022 36.3 2.0 40 117-158 26-75 (203)
3 d2qdya1 d.149.1.1 (A:10-206) I 38.2 4.3 0.00031 35.2 0.9 39 118-158 22-70 (197)
4 d1x3zb1 a.189.1.1 (B:253-309) 33.4 9.1 0.00067 26.7 1.8 23 145-167 34-56 (57)
5 d1bh9b_ a.22.1.3 (B:) TAF(II)2 22.5 31 0.0023 25.9 3.3 26 94-119 55-80 (89)
6 d1wi3a_ a.4.1.1 (A:) DNA-bindi 20.4 1.2E+02 0.0088 20.7 6.1 40 94-133 16-57 (71)
7 d1udxa1 b.117.1.1 (A:1-156) Ob 17.5 44 0.0032 27.0 3.5 11 61-71 8-18 (156)
8 d1lnza1 b.117.1.1 (A:1-157) Ob 17.0 47 0.0034 26.8 3.5 11 61-71 8-18 (157)
9 d1vz0a1 a.4.14.1 (A:116-208) P 14.1 59 0.0043 23.9 3.1 30 106-135 41-70 (93)
10 d1qusa_ d.2.1.6 (A:) 36 kDa so 13.4 57 0.0042 29.3 3.4 59 112-191 100-158 (322)
No 1
>d1ugpa_ d.149.1.1 (A:) Cobalt-containing nitrile hydratase {Pseudonocardia thermophila [TaxId: 1848]}
Probab=63.12 E-value=1.7 Score=38.00 Aligned_cols=40 Identities=35% Similarity=0.643 Sum_probs=31.1
Q ss_pred HHHcCCCCHHHHHHHHhh-cc--Chhh-------HHhhhcccchhhhccChh
Q 017752 117 AIEAGRVPAAIVKRYLEL-EK--SPVF-------RWLLNFGGFRERLLADDL 158 (366)
Q Consensus 117 A~e~G~vs~~~L~rfl~l-~~--~p~~-------~~l~~~~g~r~RlLADP~ 158 (366)
-+|.|+|+++.+.++++. +. .|.. +|. -+.||.|||+|+.
T Consensus 27 LieKGli~~~~id~~ie~~e~~vgP~~GArVVARAW~--Dp~FK~rLL~D~~ 76 (203)
T d1ugpa_ 27 LIEQGILTTSMIDRMAEIYENEVGPHLGAKVVVKAWT--DPEFKKRLLADGT 76 (203)
T ss_dssp HHHTTSCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHH--CHHHHHHHHHCHH
T ss_pred HHHcCCCCHHHHHHHHHHHHhccCCcchHHHHHHHhC--CHHHHHHHHHHHH
Confidence 468999999999999994 43 4642 254 3899999999986
No 2
>d1v29a_ d.149.1.1 (A:) Cobalt-containing nitrile hydratase {Bacillus smithii [TaxId: 1479]}
Probab=50.87 E-value=3 Score=36.32 Aligned_cols=40 Identities=28% Similarity=0.485 Sum_probs=30.8
Q ss_pred HHHcCCCCHHHHHHHHh-hccC--hhh-------HHhhhcccchhhhccChh
Q 017752 117 AIEAGRVPAAIVKRYLE-LEKS--PVF-------RWLLNFGGFRERLLADDL 158 (366)
Q Consensus 117 A~e~G~vs~~~L~rfl~-l~~~--p~~-------~~l~~~~g~r~RlLADP~ 158 (366)
-+|.|+|+++.+.+.++ ++.+ |.. +|. -+.||+|||+|+.
T Consensus 26 LieKGlit~~~id~~ie~~e~~vgP~nGArvVARAW~--Dp~FK~rLL~D~~ 75 (203)
T d1v29a_ 26 LIEKRLLSSDAIERVIKHYEHELGPMNGAKVVAKAWT--DPEFKQRLLEDPE 75 (203)
T ss_dssp HHHTTSSCHHHHHHHHHHHHTTCCTHHHHHHHHHHTT--CHHHHHHHHHSHH
T ss_pred HHHcCCCCHHHHHHHHHHHHhccCCccHHHHHHHHhc--CHHHHHHHHHCHH
Confidence 36899999999999998 4443 542 144 3899999999986
No 3
>d2qdya1 d.149.1.1 (A:10-206) Iron-containing nitrile hydratase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=38.16 E-value=4.3 Score=35.16 Aligned_cols=39 Identities=31% Similarity=0.444 Sum_probs=30.1
Q ss_pred HHcCCCCHHHHHHHHhh-ccC--hhh-------HHhhhcccchhhhccChh
Q 017752 118 IEAGRVPAAIVKRYLEL-EKS--PVF-------RWLLNFGGFRERLLADDL 158 (366)
Q Consensus 118 ~e~G~vs~~~L~rfl~l-~~~--p~~-------~~l~~~~g~r~RlLADP~ 158 (366)
+|.|+|+++.+.++++. +.+ |.. +|. -+.||.|||+||.
T Consensus 22 ieKGli~~~~vd~~ie~~e~~vgP~nGArvVAkAW~--Dp~FK~rLL~D~~ 70 (197)
T d2qdya1 22 DGKGLVPDGYVEGWKKTFEEDFSPRRGAELVARAWT--DPEFRQLLLTDGT 70 (197)
T ss_dssp HTTTCSCTTHHHHHHHHHHHTSCHHHHHHHHHHHHH--CHHHHHHHHHCHH
T ss_pred HHcCCCCHHHHHHHHHHHhhccCCcchHHHHHHHhC--CHHHHHHHHHHHH
Confidence 47899999999999984 444 642 244 3899999999986
No 4
>d1x3zb1 a.189.1.1 (B:253-309) Rad23 STI1 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.45 E-value=9.1 Score=26.71 Aligned_cols=23 Identities=17% Similarity=0.436 Sum_probs=20.0
Q ss_pred hcccchhhhccChhhHHHHHHHh
Q 017752 145 NFGGFRERLLADDLFLAKVAMEC 167 (366)
Q Consensus 145 ~~~g~r~RlLADP~FlfKl~~E~ 167 (366)
|+|-+|+-+++||.-...++.|-
T Consensus 34 ryp~lre~im~npe~fismllea 56 (57)
T d1x3zb1 34 RYPQLREHIMANPEVFVSMLLEA 56 (57)
T ss_dssp TCHHHHHHHHTCHHHHHHHHHHC
T ss_pred hhHHHHHHHHhCHHHHHHHHHhh
Confidence 68999999999999877777774
No 5
>d1bh9b_ a.22.1.3 (B:) TAF(II)28 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.55 E-value=31 Score=25.94 Aligned_cols=26 Identities=27% Similarity=0.230 Sum_probs=23.0
Q ss_pred HHHHHHHHHhccccCCchHHHHHHHH
Q 017752 94 TEAIFALAKAGRTLGDLPKDLAGAIE 119 (366)
Q Consensus 94 ~e~~~Vl~e~~rt~~~LP~dl~~A~e 119 (366)
|++..|+.||+.+.-=.|..|++|+.
T Consensus 55 E~A~~V~~~~~e~~PL~P~HireA~r 80 (89)
T d1bh9b_ 55 EEALDVCEKWGEMPPLQPKHMREAVR 80 (89)
T ss_dssp HHHHHHHHHTTCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCcHHHHHHHH
Confidence 56778999999999999999999975
No 6
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.43 E-value=1.2e+02 Score=20.75 Aligned_cols=40 Identities=15% Similarity=0.212 Sum_probs=28.0
Q ss_pred HHHHHHHHHhccccCCch--HHHHHHHHcCCCCHHHHHHHHh
Q 017752 94 TEAIFALAKAGRTLGDLP--KDLAGAIEAGRVPAAIVKRYLE 133 (366)
Q Consensus 94 ~e~~~Vl~e~~rt~~~LP--~dl~~A~e~G~vs~~~L~rfl~ 133 (366)
++-.++|++++....--| .+..+-++.-+++..++..||.
T Consensus 16 ~~Q~~~Le~~F~~~~~~P~~~~~~~La~~lgl~~~qV~~WFq 57 (71)
T d1wi3a_ 16 LEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQ 57 (71)
T ss_dssp SHHHHHHHHHHHHHCSCCCHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCHHHHHHHhH
Confidence 577889999997544444 4444455666789999888773
No 7
>d1udxa1 b.117.1.1 (A:1-156) Obg GTP-binding protein N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=17.46 E-value=44 Score=26.98 Aligned_cols=11 Identities=36% Similarity=0.724 Sum_probs=6.6
Q ss_pred eEEeccCCCCC
Q 017752 61 VIFASGGGKGG 71 (366)
Q Consensus 61 ~~~~~~~gggg 71 (366)
+.+..|+||.|
T Consensus 8 i~v~~G~GG~G 18 (156)
T d1udxa1 8 ITVAAGRGGDG 18 (156)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEecCCCCC
Confidence 45566666655
No 8
>d1lnza1 b.117.1.1 (A:1-157) Obg GTP-binding protein N-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=16.98 E-value=47 Score=26.80 Aligned_cols=11 Identities=36% Similarity=0.667 Sum_probs=6.2
Q ss_pred eEEeccCCCCC
Q 017752 61 VIFASGGGKGG 71 (366)
Q Consensus 61 ~~~~~~~gggg 71 (366)
+.+..|.||.|
T Consensus 8 i~v~aG~GG~G 18 (157)
T d1lnza1 8 VYVKGGDGGNG 18 (157)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEECCCCCc
Confidence 44555666654
No 9
>d1vz0a1 a.4.14.1 (A:116-208) Putative partitioning protein ParB/Spo0J {Thermus thermophilus [TaxId: 274]}
Probab=14.14 E-value=59 Score=23.92 Aligned_cols=30 Identities=33% Similarity=0.464 Sum_probs=23.2
Q ss_pred ccCCchHHHHHHHHcCCCCHHHHHHHHhhc
Q 017752 106 TLGDLPKDLAGAIEAGRVPAAIVKRYLELE 135 (366)
Q Consensus 106 t~~~LP~dl~~A~e~G~vs~~~L~rfl~l~ 135 (366)
++.+||.+++++++.|.|+-..-...+.+.
T Consensus 41 rLl~L~~~v~~~l~~g~Is~ghAr~L~~l~ 70 (93)
T d1vz0a1 41 RLLQLPPEALEALERGEITAGHARALLMLE 70 (93)
T ss_dssp HGGGSCHHHHHHHHTTSSCHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHcCCccHHHHHHHHCCC
Confidence 356889999999999999887766666553
No 10
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=13.36 E-value=57 Score=29.32 Aligned_cols=59 Identities=24% Similarity=0.210 Sum_probs=41.7
Q ss_pred HHHHHHHHcCCCCHHHHHHHHhhccChhhHHhhhcccchhhhccChhhHHHHHHHhhhhhhhhHHHHHhhcCcchHhHHH
Q 017752 112 KDLAGAIEAGRVPAAIVKRYLELEKSPVFRWLLNFGGFRERLLADDLFLAKVAMECGVGVFTKTAAELERRRENFSKELD 191 (366)
Q Consensus 112 ~dl~~A~e~G~vs~~~L~rfl~l~~~p~~~~l~~~~g~r~RlLADP~FlfKl~~E~~i~v~~~~~aE~~~Rge~F~~ElD 191 (366)
.-|.++-+.-+|++++++.+.-+|.+= .+-.-.+ -++++-+++..|+.+|.+-|.+||-
T Consensus 100 ~~l~~~e~~yGV~~~ii~aiwgvET~y-G~~~G~~--------------------~v~~aLaTLAf~~~rR~~ff~~EL~ 158 (322)
T d1qusa_ 100 DALNRAWQVYGVPPEIIVGIIGVETRW-GRVMGKT--------------------RILDALATLSFNYPRRAEYFSGELE 158 (322)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHTT-TTCCCCE--------------------EHHHHHHHHHHSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHhhhhch-hhhcCCC--------------------cchhhhhhhhhcccchhhhhhHHHH
Confidence 345667777889999999988888771 1111111 2667777888999988788888986
Done!