Query 017754
Match_columns 366
No_of_seqs 343 out of 2157
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 03:08:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017754.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017754hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 1.3E-36 2.8E-41 308.7 19.6 292 2-358 260-563 (591)
2 PRK11273 glpT sn-glycerol-3-ph 99.6 3.5E-14 7.6E-19 142.0 24.2 194 132-360 249-448 (452)
3 PRK09556 uhpT sugar phosphate 99.6 3.3E-14 7.2E-19 142.7 22.9 191 132-347 254-449 (467)
4 PRK11663 regulatory protein Uh 99.6 1.6E-13 3.4E-18 136.5 23.8 183 132-347 239-424 (434)
5 PRK10504 putative transporter; 99.6 4.2E-14 9.2E-19 141.7 19.7 175 136-349 10-187 (471)
6 TIGR00890 2A0111 Oxalate/Forma 99.6 3.8E-14 8.3E-19 136.1 18.0 174 128-340 197-375 (377)
7 COG2271 UhpC Sugar phosphate p 99.6 7.8E-14 1.7E-18 134.1 18.8 190 131-356 247-443 (448)
8 PRK11663 regulatory protein Uh 99.6 9.2E-14 2E-18 138.2 19.9 172 136-346 23-197 (434)
9 PRK03545 putative arabinose tr 99.6 9.3E-14 2E-18 135.9 19.2 171 138-347 11-184 (390)
10 TIGR02332 HpaX 4-hydroxyphenyl 99.6 7.7E-14 1.7E-18 137.9 18.7 180 137-349 9-191 (412)
11 COG2814 AraJ Arabinose efflux 99.6 1.5E-13 3.3E-18 133.0 19.9 173 137-348 14-189 (394)
12 TIGR00893 2A0114 d-galactonate 99.6 4.8E-13 1E-17 128.7 23.5 187 127-345 206-397 (399)
13 KOG2504 Monocarboxylate transp 99.6 1.1E-13 2.3E-18 140.0 18.6 182 130-347 292-476 (509)
14 PRK14995 methyl viologen resis 99.6 1.4E-13 3E-18 139.3 19.4 173 138-349 8-184 (495)
15 TIGR01299 synapt_SV2 synaptic 99.6 1.7E-13 3.8E-18 143.7 20.4 163 154-342 185-350 (742)
16 PRK10213 nepI ribonucleoside t 99.6 2.1E-13 4.5E-18 134.1 19.8 153 151-342 35-190 (394)
17 PRK09705 cynX putative cyanate 99.6 1.8E-13 3.8E-18 134.4 19.0 185 129-352 198-386 (393)
18 PRK10091 MFS transport protein 99.6 1.9E-13 4E-18 133.6 18.6 171 136-345 3-176 (382)
19 TIGR00900 2A0121 H+ Antiporter 99.5 2E-13 4.4E-18 130.6 17.7 169 139-346 2-178 (365)
20 PRK15403 multidrug efflux syst 99.5 3.7E-13 7.9E-18 133.2 19.1 161 150-349 30-193 (413)
21 TIGR00710 efflux_Bcr_CflA drug 99.5 3.6E-13 7.9E-18 130.4 18.8 160 150-348 19-181 (385)
22 PRK11551 putative 3-hydroxyphe 99.5 3.3E-13 7.2E-18 132.3 18.6 172 138-347 222-396 (406)
23 PRK10054 putative transporter; 99.5 6E-13 1.3E-17 130.8 19.7 171 137-347 8-182 (395)
24 TIGR00711 efflux_EmrB drug res 99.5 1.9E-13 4.1E-18 137.0 16.2 171 140-349 6-179 (485)
25 PF07690 MFS_1: Major Facilita 99.5 1E-13 2.2E-18 132.2 13.6 165 143-346 3-171 (352)
26 TIGR00892 2A0113 monocarboxyla 99.5 3.9E-13 8.4E-18 134.7 18.2 177 131-341 236-415 (455)
27 PRK11551 putative 3-hydroxyphe 99.5 1.3E-12 2.9E-17 128.1 20.6 172 139-349 18-192 (406)
28 TIGR00893 2A0114 d-galactonate 99.5 3.3E-13 7.1E-18 129.9 15.8 160 149-347 7-169 (399)
29 COG2223 NarK Nitrate/nitrite t 99.5 3.5E-13 7.5E-18 129.7 15.2 184 129-351 211-405 (417)
30 TIGR00890 2A0111 Oxalate/Forma 99.5 6.2E-13 1.3E-17 127.7 17.0 163 145-347 12-177 (377)
31 PRK10473 multidrug efflux syst 99.5 1.3E-12 2.8E-17 127.7 19.3 168 143-349 10-180 (392)
32 TIGR00924 yjdL_sub1_fam amino 99.5 7.2E-13 1.6E-17 133.5 17.7 167 137-342 11-187 (475)
33 TIGR00903 2A0129 major facilit 99.5 7.7E-13 1.7E-17 129.0 17.2 159 151-349 6-167 (368)
34 TIGR00889 2A0110 nucleoside tr 99.5 1E-12 2.2E-17 130.2 18.0 189 129-350 201-405 (418)
35 PRK05122 major facilitator sup 99.5 2.9E-12 6.4E-17 125.4 21.0 156 154-348 234-390 (399)
36 PRK03699 putative transporter; 99.5 2E-12 4.4E-17 126.8 19.9 170 136-343 7-179 (394)
37 PRK03699 putative transporter; 99.5 3E-12 6.6E-17 125.5 21.0 178 135-352 204-385 (394)
38 PRK15402 multidrug efflux syst 99.5 2.1E-12 4.6E-17 126.9 19.6 159 151-348 28-189 (406)
39 PRK12307 putative sialic acid 99.5 3E-12 6.5E-17 126.4 20.6 148 138-292 20-170 (426)
40 PRK11652 emrD multidrug resist 99.5 2.4E-12 5.2E-17 125.9 19.5 172 138-348 10-184 (394)
41 TIGR00891 2A0112 putative sial 99.5 3.7E-12 7.9E-17 124.0 20.6 148 138-292 14-164 (405)
42 cd06174 MFS The Major Facilita 99.5 2.4E-12 5.1E-17 122.1 18.7 169 139-346 2-173 (352)
43 PRK15034 nitrate/nitrite trans 99.5 1.4E-12 3E-17 129.9 17.7 184 128-350 244-457 (462)
44 TIGR00895 2A0115 benzoate tran 99.5 1E-12 2.2E-17 127.2 16.3 166 144-348 25-193 (398)
45 PRK09874 drug efflux system pr 99.5 5.4E-12 1.2E-16 123.5 21.2 172 137-348 15-194 (408)
46 PRK11102 bicyclomycin/multidru 99.5 1.9E-12 4E-17 125.6 17.5 158 153-349 8-168 (377)
47 PRK15462 dipeptide/tripeptide 99.5 2.2E-12 4.8E-17 129.7 18.4 149 137-292 10-166 (493)
48 PRK12382 putative transporter; 99.5 7E-12 1.5E-16 122.6 21.6 154 154-346 234-388 (392)
49 PRK09584 tppB putative tripept 99.5 4.2E-12 9.2E-17 128.8 20.6 172 132-342 16-196 (500)
50 TIGR01299 synapt_SV2 synaptic 99.5 2.5E-12 5.5E-17 135.0 19.0 137 175-352 601-738 (742)
51 PRK03633 putative MFS family t 99.5 6.7E-12 1.4E-16 122.5 20.6 173 128-341 192-366 (381)
52 TIGR00894 2A0114euk Na(+)-depe 99.5 3.4E-12 7.5E-17 127.8 19.0 191 127-348 252-451 (465)
53 TIGR00712 glpT glycerol-3-phos 99.5 3.3E-12 7.1E-17 127.2 18.6 176 135-349 26-208 (438)
54 PRK11195 lysophospholipid tran 99.5 3.8E-12 8.2E-17 125.1 18.7 147 135-290 2-150 (393)
55 TIGR00712 glpT glycerol-3-phos 99.5 3.1E-12 6.8E-17 127.3 18.2 186 131-351 246-437 (438)
56 PRK11646 multidrug resistance 99.5 6.1E-12 1.3E-16 123.9 20.0 169 139-347 13-185 (400)
57 TIGR00892 2A0113 monocarboxyla 99.5 3.4E-12 7.4E-17 127.9 18.4 153 154-346 37-193 (455)
58 TIGR00879 SP MFS transporter, 99.5 1.1E-12 2.4E-17 129.8 14.7 177 136-351 284-474 (481)
59 PRK03893 putative sialic acid 99.4 6.4E-12 1.4E-16 126.6 20.4 149 137-292 21-172 (496)
60 TIGR00886 2A0108 nitrite extru 99.4 4E-12 8.7E-17 122.5 18.1 146 137-290 2-152 (366)
61 PLN00028 nitrate transmembrane 99.4 2.1E-12 4.5E-17 130.2 16.6 184 129-347 245-433 (476)
62 PRK10642 proline/glycine betai 99.4 1.1E-11 2.4E-16 125.2 22.0 158 128-292 240-406 (490)
63 PRK10207 dipeptide/tripeptide 99.4 3.3E-12 7.1E-17 129.2 18.0 149 137-292 15-171 (489)
64 TIGR00897 2A0118 polyol permea 99.4 1.1E-11 2.3E-16 122.0 21.2 178 129-346 215-400 (402)
65 TIGR00902 2A0127 phenyl propri 99.4 9.6E-12 2.1E-16 121.6 20.4 157 128-292 197-357 (382)
66 PRK09952 shikimate transporter 99.4 1.3E-11 2.8E-16 123.0 21.6 178 132-346 245-432 (438)
67 TIGR00881 2A0104 phosphoglycer 99.4 6.5E-13 1.4E-17 127.6 11.9 165 145-348 4-172 (379)
68 PRK11043 putative transporter; 99.4 7.5E-12 1.6E-16 122.7 19.3 160 148-346 18-180 (401)
69 PRK09528 lacY galactoside perm 99.4 2.6E-12 5.7E-17 127.0 16.1 180 129-347 216-403 (420)
70 COG2271 UhpC Sugar phosphate p 99.4 1.9E-12 4.2E-17 124.6 14.1 176 134-348 27-207 (448)
71 PRK03545 putative arabinose tr 99.4 1.3E-11 2.8E-16 120.8 20.3 179 128-347 197-380 (390)
72 PRK11273 glpT sn-glycerol-3-ph 99.4 1.1E-11 2.4E-16 123.9 20.2 156 155-349 48-210 (452)
73 PRK10489 enterobactin exporter 99.4 4.8E-12 1E-16 124.9 17.3 174 132-344 13-194 (417)
74 PLN00028 nitrate transmembrane 99.4 1.3E-11 2.9E-16 124.3 20.8 173 143-346 43-218 (476)
75 TIGR02332 HpaX 4-hydroxyphenyl 99.4 3.5E-12 7.5E-17 126.1 16.1 154 133-292 239-397 (412)
76 PRK09556 uhpT sugar phosphate 99.4 2.2E-12 4.8E-17 129.5 14.8 168 143-346 36-211 (467)
77 PRK09705 cynX putative cyanate 99.4 1E-11 2.2E-16 122.0 18.5 130 154-291 27-159 (393)
78 TIGR00899 2A0120 sugar efflux 99.4 2.5E-11 5.3E-16 117.3 20.3 177 129-345 192-372 (375)
79 PRK12382 putative transporter; 99.4 1.2E-11 2.6E-16 120.9 18.2 152 134-292 13-176 (392)
80 TIGR00903 2A0129 major facilit 99.4 1.9E-11 4.1E-16 119.2 19.4 176 129-344 185-362 (368)
81 TIGR00881 2A0104 phosphoglycer 99.4 1.8E-11 3.9E-16 117.6 18.8 160 129-292 209-374 (379)
82 PRK10406 alpha-ketoglutarate t 99.4 3.6E-11 7.8E-16 119.5 21.4 180 128-346 234-423 (432)
83 PF06609 TRI12: Fungal trichot 99.4 7.4E-12 1.6E-16 127.6 16.7 176 134-349 38-219 (599)
84 TIGR00883 2A0106 metabolite-pr 99.4 1.6E-11 3.5E-16 118.5 18.2 160 127-292 208-377 (394)
85 PRK10077 xylE D-xylose transpo 99.4 1.5E-11 3.4E-16 123.2 18.1 159 156-345 32-213 (479)
86 PRK09874 drug efflux system pr 99.4 1.3E-11 2.8E-16 120.9 16.3 178 130-346 212-397 (408)
87 TIGR00879 SP MFS transporter, 99.4 1.2E-11 2.5E-16 122.5 15.9 125 153-284 45-183 (481)
88 PRK05122 major facilitator sup 99.4 2.7E-11 5.9E-16 118.6 18.2 149 137-292 16-176 (399)
89 TIGR00897 2A0118 polyol permea 99.4 2.1E-11 4.5E-16 120.0 17.4 148 139-292 16-170 (402)
90 TIGR00887 2A0109 phosphate:H+ 99.4 7.8E-12 1.7E-16 126.7 14.6 173 150-352 302-493 (502)
91 cd06174 MFS The Major Facilita 99.4 2.9E-11 6.3E-16 114.6 17.7 170 136-344 175-349 (352)
92 PRK10489 enterobactin exporter 99.4 4.1E-11 8.9E-16 118.3 19.3 183 130-352 218-404 (417)
93 TIGR00898 2A0119 cation transp 99.4 3.2E-11 7E-16 121.9 18.9 182 127-351 314-498 (505)
94 KOG2532 Permease of the major 99.4 1.4E-11 3.1E-16 123.2 15.8 192 125-347 247-447 (466)
95 PRK10642 proline/glycine betai 99.3 5.2E-11 1.1E-15 120.4 19.2 144 138-288 18-178 (490)
96 TIGR02718 sider_RhtX_FptX side 99.3 7.7E-11 1.7E-15 115.3 19.8 175 128-341 200-385 (390)
97 PRK03633 putative MFS family t 99.3 5.3E-11 1.1E-15 116.1 18.6 149 135-290 5-156 (381)
98 PRK12307 putative sialic acid 99.3 5.8E-11 1.3E-15 117.2 19.0 158 128-292 220-385 (426)
99 TIGR00792 gph sugar (Glycoside 99.3 1.4E-10 2.9E-15 114.9 21.6 157 129-292 215-382 (437)
100 PRK15034 nitrate/nitrite trans 99.3 6E-11 1.3E-15 118.3 18.9 187 135-348 33-233 (462)
101 TIGR00896 CynX cyanate transpo 99.3 4.6E-11 9.9E-16 115.2 17.4 159 128-292 189-350 (355)
102 KOG1330 Sugar transporter/spin 99.3 1.1E-12 2.5E-17 127.3 5.5 176 139-352 36-214 (493)
103 PRK10077 xylE D-xylose transpo 99.3 6E-11 1.3E-15 118.9 18.1 159 155-352 290-462 (479)
104 PF11700 ATG22: Vacuole efflux 99.3 1.7E-10 3.8E-15 115.9 21.0 183 129-346 274-467 (477)
105 PRK10406 alpha-ketoglutarate t 99.3 1.3E-10 2.9E-15 115.4 19.8 137 144-287 30-183 (432)
106 PRK11128 putative 3-phenylprop 99.3 1.9E-10 4.2E-15 112.3 20.6 158 127-292 196-357 (382)
107 TIGR01272 gluP glucose/galacto 99.3 1.8E-10 3.9E-15 109.8 19.4 153 131-292 135-292 (310)
108 TIGR00894 2A0114euk Na(+)-depe 99.3 1.9E-11 4.1E-16 122.5 13.3 144 165-347 70-219 (465)
109 TIGR00880 2_A_01_02 Multidrug 99.3 3.2E-11 6.9E-16 98.9 12.4 131 177-346 6-137 (141)
110 PRK15011 sugar efflux transpor 99.3 3E-10 6.5E-15 111.4 21.1 156 149-344 229-388 (393)
111 PRK09952 shikimate transporter 99.3 3.6E-10 7.9E-15 112.6 21.7 146 137-289 23-186 (438)
112 TIGR00885 fucP L-fucose:H+ sym 99.3 2.6E-10 5.6E-15 112.8 20.4 146 138-290 5-156 (410)
113 TIGR00882 2A0105 oligosacchari 99.3 2.1E-10 4.5E-15 112.5 19.5 179 128-345 207-393 (396)
114 TIGR00899 2A0120 sugar efflux 99.3 1.3E-10 2.9E-15 112.2 17.8 165 146-348 7-177 (375)
115 TIGR00900 2A0121 H+ Antiporter 99.3 1.5E-10 3.3E-15 110.7 17.9 156 129-291 203-364 (365)
116 KOG4686 Predicted sugar transp 99.3 5E-11 1.1E-15 109.2 13.5 151 135-292 263-416 (459)
117 TIGR00882 2A0105 oligosacchari 99.3 1.1E-10 2.4E-15 114.4 17.2 170 135-346 1-182 (396)
118 PRK09528 lacY galactoside perm 99.3 9.1E-11 2E-15 116.0 16.4 173 132-346 6-190 (420)
119 PRK15075 citrate-proton sympor 99.3 2.8E-10 6.1E-15 113.1 19.8 155 131-292 232-396 (434)
120 PRK10091 MFS transport protein 99.3 3.1E-10 6.7E-15 110.8 19.3 177 130-346 193-375 (382)
121 PRK11010 ampG muropeptide tran 99.3 5.9E-10 1.3E-14 112.9 21.4 170 137-345 13-193 (491)
122 PTZ00207 hypothetical protein; 99.3 4.7E-10 1E-14 115.0 20.4 155 152-347 43-205 (591)
123 TIGR00895 2A0115 benzoate tran 99.3 9.2E-11 2E-15 113.5 14.6 144 137-287 251-397 (398)
124 PRK03893 putative sialic acid 99.3 1.5E-10 3.2E-15 116.7 16.5 132 154-292 293-430 (496)
125 PRK11010 ampG muropeptide tran 99.3 1.1E-09 2.3E-14 111.0 22.4 179 129-346 215-402 (491)
126 TIGR00891 2A0112 putative sial 99.2 4.4E-10 9.5E-15 109.3 18.7 132 154-292 256-392 (405)
127 PRK10504 putative transporter; 99.2 7E-10 1.5E-14 111.2 20.3 155 131-292 256-417 (471)
128 COG2814 AraJ Arabinose efflux 99.2 7.7E-10 1.7E-14 107.4 19.6 179 128-347 203-386 (394)
129 TIGR00896 CynX cyanate transpo 99.2 2.4E-10 5.2E-15 110.2 15.7 131 154-292 18-150 (355)
130 TIGR00887 2A0109 phosphate:H+ 99.2 6.9E-10 1.5E-14 112.5 19.7 109 174-289 61-176 (502)
131 TIGR00806 rfc RFC reduced fola 99.2 7E-10 1.5E-14 109.8 18.9 162 155-354 45-210 (511)
132 PRK15075 citrate-proton sympor 99.2 5.3E-10 1.1E-14 111.2 18.2 144 138-288 17-177 (434)
133 TIGR00805 oat sodium-independe 99.2 6.7E-11 1.5E-15 123.2 11.9 132 153-291 50-235 (633)
134 COG2807 CynX Cyanate permease 99.2 1.2E-09 2.5E-14 103.7 18.7 181 128-345 200-383 (395)
135 PRK06814 acylglycerophosphoeth 99.2 3.4E-10 7.4E-15 125.5 17.7 159 131-292 6-172 (1140)
136 PRK10133 L-fucose transporter; 99.2 1.4E-09 3E-14 108.6 20.0 145 137-288 27-177 (438)
137 PRK10213 nepI ribonucleoside t 99.2 3E-09 6.4E-14 104.6 21.3 157 128-292 208-368 (394)
138 TIGR00898 2A0119 cation transp 99.2 1.5E-10 3.2E-15 117.1 12.3 145 158-344 111-261 (505)
139 PRK15011 sugar efflux transpor 99.2 2.3E-09 5E-14 105.2 20.2 176 135-349 14-196 (393)
140 PRK10054 putative transporter; 99.2 4.8E-10 1.1E-14 110.2 15.4 156 129-292 199-361 (395)
141 COG3104 PTR2 Dipeptide/tripept 99.2 3.4E-10 7.3E-15 111.5 13.6 170 138-346 23-205 (498)
142 TIGR00902 2A0127 phenyl propri 99.2 1.5E-09 3.2E-14 106.1 18.1 147 139-292 7-156 (382)
143 KOG3764 Vesicular amine transp 99.2 1.2E-10 2.6E-15 111.4 9.8 139 174-351 111-251 (464)
144 PRK08633 2-acyl-glycerophospho 99.2 1.1E-09 2.4E-14 121.3 18.7 152 132-290 5-165 (1146)
145 PRK15402 multidrug efflux syst 99.2 2.8E-09 6.1E-14 104.7 19.6 156 129-292 208-372 (406)
146 PRK11902 ampG muropeptide tran 99.2 2.6E-09 5.5E-14 105.1 19.2 152 153-343 16-178 (402)
147 PRK11646 multidrug resistance 99.1 3.2E-09 6.8E-14 104.6 19.0 158 128-292 200-361 (400)
148 TIGR00901 2A0125 AmpG-related 99.1 2.9E-09 6.3E-14 102.6 18.2 166 155-346 7-177 (356)
149 PRK11128 putative 3-phenylprop 99.1 1.6E-09 3.5E-14 105.8 16.6 133 153-292 21-156 (382)
150 PRK11902 ampG muropeptide tran 99.1 1.4E-08 3E-13 99.9 22.2 176 128-343 201-386 (402)
151 PRK10429 melibiose:sodium symp 99.1 6.7E-09 1.5E-13 104.6 20.2 156 130-292 225-395 (473)
152 KOG2533 Permease of the major 99.1 2E-09 4.4E-14 108.3 16.1 138 127-265 264-405 (495)
153 PRK06814 acylglycerophosphoeth 99.1 4E-09 8.6E-14 117.1 19.9 156 129-291 218-397 (1140)
154 TIGR00885 fucP L-fucose:H+ sym 99.1 5.3E-09 1.2E-13 103.5 18.5 156 128-292 224-383 (410)
155 PRK10133 L-fucose transporter; 99.1 5.6E-09 1.2E-13 104.2 18.7 155 129-292 251-409 (438)
156 PF05977 MFS_3: Transmembrane 99.1 7E-09 1.5E-13 105.5 18.7 155 131-292 5-167 (524)
157 PRK08633 2-acyl-glycerophospho 99.1 1.1E-08 2.3E-13 113.5 21.5 154 129-289 225-383 (1146)
158 PRK09669 putative symporter Ya 99.1 8.3E-09 1.8E-13 102.9 18.5 157 129-292 222-390 (444)
159 KOG0255 Synaptic vesicle trans 99.1 1.5E-09 3.2E-14 110.6 13.1 127 174-342 123-250 (521)
160 COG2270 Permeases of the major 99.1 4.5E-09 9.8E-14 101.6 15.6 180 129-346 245-428 (438)
161 PF03825 Nuc_H_symport: Nucleo 99.1 1.7E-08 3.8E-13 99.4 20.1 159 128-293 199-367 (400)
162 TIGR00711 efflux_EmrB drug res 99.1 6.1E-09 1.3E-13 104.4 17.1 155 130-291 249-411 (485)
163 PRK09848 glucuronide transport 99.0 8.6E-09 1.9E-13 102.9 17.7 157 129-292 221-390 (448)
164 KOG0569 Permease of the major 99.0 2.9E-08 6.2E-13 99.2 20.6 190 125-354 254-461 (485)
165 PF01306 LacY_symp: LacY proto 99.0 1.5E-07 3.3E-12 92.3 25.2 182 129-349 213-402 (412)
166 TIGR00710 efflux_Bcr_CflA drug 99.0 2.5E-08 5.4E-13 96.5 19.2 151 129-287 199-358 (385)
167 COG2223 NarK Nitrate/nitrite t 99.0 5.6E-09 1.2E-13 100.9 13.8 173 137-347 15-193 (417)
168 TIGR00883 2A0106 metabolite-pr 99.0 1.6E-08 3.4E-13 97.6 17.1 103 180-289 46-157 (394)
169 PRK11043 putative transporter; 99.0 3.5E-08 7.6E-13 96.7 19.3 159 128-291 195-358 (401)
170 KOG0253 Synaptic vesicle trans 99.0 1.4E-09 2.9E-14 103.2 8.1 137 175-352 387-524 (528)
171 PF13347 MFS_2: MFS/sugar tran 99.0 2.9E-08 6.3E-13 98.5 18.1 159 127-292 216-386 (428)
172 PF07690 MFS_1: Major Facilita 99.0 5.6E-09 1.2E-13 99.4 12.2 149 129-281 199-352 (352)
173 KOG0254 Predicted transporter 99.0 1.5E-08 3.2E-13 103.2 15.7 137 173-348 93-230 (513)
174 PRK14995 methyl viologen resis 98.9 2.8E-08 6.1E-13 100.7 16.5 155 130-291 253-414 (495)
175 PRK10473 multidrug efflux syst 98.9 6.2E-08 1.3E-12 94.7 18.3 151 129-292 196-351 (392)
176 KOG2615 Permease of the major 98.9 4.2E-09 9E-14 100.4 9.4 108 174-289 73-181 (451)
177 TIGR00886 2A0108 nitrite extru 98.9 2.6E-08 5.7E-13 95.9 14.7 141 129-276 218-366 (366)
178 TIGR01301 GPH_sucrose GPH fami 98.9 1.3E-07 2.7E-12 95.1 19.0 175 151-350 19-221 (477)
179 KOG2532 Permease of the major 98.9 5.3E-09 1.1E-13 104.8 9.0 144 166-348 68-217 (466)
180 TIGR02718 sider_RhtX_FptX side 98.9 9.4E-08 2E-12 93.5 17.5 169 141-347 6-184 (390)
181 TIGR00901 2A0125 AmpG-related 98.9 7.3E-08 1.6E-12 92.8 15.9 139 129-273 199-355 (356)
182 TIGR00792 gph sugar (Glycoside 98.9 4.6E-08 1E-12 96.7 14.5 166 157-349 20-196 (437)
183 PRK11102 bicyclomycin/multidru 98.8 1.6E-07 3.4E-12 91.0 17.5 148 129-284 187-343 (377)
184 COG0738 FucP Fucose permease [ 98.8 2.2E-07 4.8E-12 89.5 17.8 156 128-292 228-386 (422)
185 PRK11462 putative transporter; 98.8 5.5E-07 1.2E-11 90.5 21.2 157 130-292 222-389 (460)
186 PF05977 MFS_3: Transmembrane 98.8 7.2E-07 1.6E-11 90.9 20.3 132 154-292 236-371 (524)
187 KOG2504 Monocarboxylate transp 98.8 7.8E-08 1.7E-12 97.5 13.2 152 157-348 67-222 (509)
188 PRK11652 emrD multidrug resist 98.7 6E-07 1.3E-11 87.8 18.2 155 129-290 200-360 (394)
189 PRK11195 lysophospholipid tran 98.7 1E-06 2.2E-11 86.6 19.4 127 157-292 226-357 (393)
190 KOG2533 Permease of the major 98.7 2.5E-07 5.5E-12 93.2 14.7 143 174-348 86-228 (495)
191 COG2211 MelB Na+/melibiose sym 98.7 7.2E-07 1.6E-11 88.6 17.1 155 131-292 231-398 (467)
192 COG2807 CynX Cyanate permease 98.6 3.2E-06 6.9E-11 80.6 18.5 154 154-346 30-185 (395)
193 KOG0252 Inorganic phosphate tr 98.6 8E-08 1.7E-12 93.8 7.7 177 143-354 311-504 (538)
194 TIGR00788 fbt folate/biopterin 98.6 1.3E-06 2.8E-11 88.0 16.8 171 138-345 28-207 (468)
195 PRK09669 putative symporter Ya 98.6 1.1E-06 2.4E-11 87.6 15.9 163 157-346 30-203 (444)
196 COG0738 FucP Fucose permease [ 98.6 3.6E-06 7.8E-11 81.3 17.1 133 151-290 28-166 (422)
197 KOG0252 Inorganic phosphate tr 98.5 8.6E-07 1.9E-11 86.7 12.3 108 174-288 89-204 (538)
198 KOG0569 Permease of the major 98.5 1.2E-06 2.5E-11 87.8 12.2 101 174-281 65-169 (485)
199 TIGR00924 yjdL_sub1_fam amino 98.5 2.6E-05 5.7E-10 78.7 21.8 142 174-348 317-469 (475)
200 TIGR00926 2A1704 Peptide:H+ sy 98.5 4.5E-06 9.8E-11 87.1 16.3 150 163-345 15-180 (654)
201 KOG3764 Vesicular amine transp 98.4 2.9E-06 6.3E-11 81.7 12.6 182 127-345 261-452 (464)
202 PF01306 LacY_symp: LacY proto 98.4 4E-06 8.6E-11 82.4 13.8 154 133-292 4-166 (412)
203 TIGR00889 2A0110 nucleoside tr 98.4 5.6E-06 1.2E-10 82.1 15.0 121 155-287 21-153 (418)
204 PRK15403 multidrug efflux syst 98.4 3.2E-05 7E-10 76.5 20.1 158 129-291 211-374 (413)
205 PRK11462 putative transporter; 98.4 1.6E-05 3.4E-10 80.0 18.0 132 157-290 30-172 (460)
206 PRK10429 melibiose:sodium symp 98.4 1.3E-05 2.7E-10 80.9 16.5 132 155-288 25-167 (473)
207 PF13347 MFS_2: MFS/sugar tran 98.4 1.8E-06 3.9E-11 85.7 10.0 164 159-349 25-200 (428)
208 PF00083 Sugar_tr: Sugar (and 98.4 3.8E-10 8.3E-15 112.3 -16.5 161 155-354 272-443 (451)
209 PF03209 PUCC: PUCC protein; 98.3 4.7E-05 1E-09 74.1 17.4 190 129-346 201-397 (403)
210 PF00083 Sugar_tr: Sugar (and 98.3 6.2E-09 1.3E-13 103.6 -10.4 103 174-283 51-157 (451)
211 TIGR00788 fbt folate/biopterin 98.2 5.9E-06 1.3E-10 83.3 10.6 122 164-292 281-415 (468)
212 PRK09848 glucuronide transport 98.2 6.8E-05 1.5E-09 74.8 17.7 115 160-274 33-157 (448)
213 PF05631 DUF791: Protein of un 98.2 0.00011 2.5E-09 70.3 17.9 124 162-292 60-191 (354)
214 PRK10207 dipeptide/tripeptide 98.2 0.00019 4.1E-09 72.8 20.8 113 174-287 314-438 (489)
215 TIGR01301 GPH_sucrose GPH fami 98.2 8.2E-05 1.8E-09 75.0 17.8 180 136-351 258-475 (477)
216 PRK09584 tppB putative tripept 98.2 0.00021 4.6E-09 72.7 20.3 153 174-352 321-484 (500)
217 PF03825 Nuc_H_symport: Nucleo 98.2 7.6E-05 1.7E-09 73.7 16.2 116 155-277 21-139 (400)
218 KOG0254 Predicted transporter 98.1 3.8E-05 8.2E-10 78.3 13.5 181 135-354 294-490 (513)
219 KOG3762 Predicted transporter 98.1 3.3E-05 7.2E-10 77.1 11.5 176 131-346 366-546 (618)
220 PF03209 PUCC: PUCC protein; 98.1 0.00012 2.6E-09 71.2 15.0 128 163-292 7-153 (403)
221 KOG2563 Permease of the major 98.0 4E-05 8.6E-10 75.1 11.3 157 127-289 257-420 (480)
222 PF06813 Nodulin-like: Nodulin 98.0 0.00018 3.9E-09 66.3 14.9 127 148-282 14-150 (250)
223 COG2211 MelB Na+/melibiose sym 98.0 0.00021 4.6E-09 71.2 15.9 136 156-292 32-177 (467)
224 COG0477 ProP Permeases of the 98.0 0.00071 1.5E-08 61.4 17.8 129 155-290 21-158 (338)
225 KOG2816 Predicted transporter 98.0 6.5E-05 1.4E-09 75.4 11.5 131 179-352 72-204 (463)
226 KOG0255 Synaptic vesicle trans 97.9 0.0011 2.3E-08 67.6 20.4 101 181-288 362-466 (521)
227 PF06609 TRI12: Fungal trichot 97.9 0.0014 3E-08 67.7 19.5 156 129-290 302-467 (599)
228 KOG0253 Synaptic vesicle trans 97.8 0.00068 1.5E-08 65.2 13.9 133 174-347 118-251 (528)
229 PF03092 BT1: BT1 family; Int 97.7 0.00066 1.4E-08 67.8 14.6 158 158-349 12-177 (433)
230 TIGR00805 oat sodium-independe 97.7 0.0012 2.5E-08 69.2 16.9 72 128-199 322-397 (633)
231 KOG2325 Predicted transporter/ 97.6 0.00064 1.4E-08 68.1 12.4 186 138-350 36-232 (488)
232 KOG1330 Sugar transporter/spin 97.6 0.00011 2.4E-09 72.3 6.4 138 154-292 262-414 (493)
233 PF05978 UNC-93: Ion channel r 97.5 0.005 1.1E-07 52.6 13.8 108 174-288 42-149 (156)
234 PRK03612 spermidine synthase; 97.4 0.035 7.6E-07 56.8 21.6 123 165-292 44-174 (521)
235 PRK15462 dipeptide/tripeptide 97.4 0.046 9.9E-07 55.5 22.0 118 167-285 305-435 (493)
236 PF11700 ATG22: Vacuole efflux 97.3 0.023 5E-07 57.5 18.7 145 174-349 75-249 (477)
237 PF00854 PTR2: POT family; In 97.2 0.0017 3.6E-08 63.3 9.4 104 208-344 4-120 (372)
238 PF12832 MFS_1_like: MFS_1 lik 97.2 0.0018 3.9E-08 48.4 7.1 53 150-202 14-68 (77)
239 KOG2615 Permease of the major 97.1 0.0032 6.9E-08 60.8 10.0 123 164-291 290-415 (451)
240 KOG4686 Predicted sugar transp 96.8 0.001 2.3E-08 61.8 3.7 149 137-293 42-201 (459)
241 TIGR01272 gluP glucose/galacto 96.6 0.021 4.6E-07 54.3 11.2 64 226-290 9-72 (310)
242 PF03137 OATP: Organic Anion T 96.6 0.00051 1.1E-08 70.5 0.0 71 127-197 296-370 (539)
243 PF02487 CLN3: CLN3 protein; 96.5 0.27 5.8E-06 48.5 18.2 103 174-285 286-392 (402)
244 TIGR00769 AAA ADP/ATP carrier 96.4 0.23 5.1E-06 50.1 17.7 47 243-290 144-191 (472)
245 KOG3626 Organic anion transpor 96.4 0.11 2.4E-06 54.7 15.4 69 128-196 384-456 (735)
246 KOG3098 Uncharacterized conser 96.3 0.58 1.2E-05 47.0 19.2 142 131-277 235-402 (461)
247 KOG2563 Permease of the major 96.3 0.069 1.5E-06 52.9 12.3 109 174-290 84-202 (480)
248 COG2270 Permeases of the major 96.0 0.078 1.7E-06 52.1 11.3 152 174-349 63-222 (438)
249 PF01770 Folate_carrier: Reduc 96.0 0.51 1.1E-05 46.6 16.9 93 174-270 290-383 (412)
250 PF03137 OATP: Organic Anion T 95.9 0.0014 3E-08 67.3 -1.4 129 155-290 22-203 (539)
251 TIGR00939 2a57 Equilibrative N 95.9 0.11 2.5E-06 51.9 12.2 103 174-281 312-425 (437)
252 COG3104 PTR2 Dipeptide/tripept 95.9 0.66 1.4E-05 46.7 17.2 119 166-285 320-451 (498)
253 KOG2816 Predicted transporter 95.4 0.18 4E-06 50.8 11.7 120 165-292 271-394 (463)
254 KOG1237 H+/oligopeptide sympor 95.1 0.23 5E-06 51.4 11.8 150 157-345 59-243 (571)
255 PF06963 FPN1: Ferroportin1 (F 94.9 4.7 0.0001 40.3 20.0 65 138-202 4-71 (432)
256 PF01770 Folate_carrier: Reduc 94.8 1.2 2.7E-05 43.9 15.2 149 166-352 35-187 (412)
257 KOG3626 Organic anion transpor 94.8 0.12 2.7E-06 54.3 8.6 174 155-349 116-345 (735)
258 PF07672 MFS_Mycoplasma: Mycop 94.6 3.4 7.3E-05 38.3 16.5 25 15-39 37-61 (267)
259 PF03092 BT1: BT1 family; Int 94.5 1 2.2E-05 45.0 14.3 116 174-292 256-382 (433)
260 KOG2325 Predicted transporter/ 94.2 0.52 1.1E-05 47.6 11.2 73 246-351 407-479 (488)
261 KOG0637 Sucrose transporter an 93.4 0.3 6.4E-06 48.6 7.8 125 155-281 51-196 (498)
262 KOG3098 Uncharacterized conser 92.7 0.35 7.6E-06 48.5 7.3 101 174-281 55-155 (461)
263 KOG3574 Acetyl-CoA transporter 92.5 1 2.2E-05 44.0 9.8 126 150-281 44-186 (510)
264 PF06963 FPN1: Ferroportin1 (F 91.6 3.2 6.9E-05 41.5 12.6 155 128-288 251-415 (432)
265 PF06779 DUF1228: Protein of u 91.3 1.5 3.2E-05 33.4 7.6 66 152-223 8-75 (85)
266 KOG4332 Predicted sugar transp 90.3 0.53 1.2E-05 43.9 5.2 90 163-259 64-157 (454)
267 PF01733 Nucleoside_tran: Nucl 90.0 0.11 2.4E-06 49.4 0.6 100 174-277 187-298 (309)
268 PF13000 Acatn: Acetyl-coenzym 89.7 25 0.00055 35.8 19.5 99 239-344 417-522 (544)
269 PF03219 TLC: TLC ATP/ADP tran 89.4 27 0.00059 35.6 17.2 42 247-289 164-205 (491)
270 KOG3762 Predicted transporter 88.1 0.53 1.1E-05 47.9 3.8 48 155-202 30-79 (618)
271 KOG3810 Micronutrient transpor 88.1 5.6 0.00012 38.6 10.4 88 179-270 281-369 (433)
272 TIGR00806 rfc RFC reduced fola 85.1 12 0.00026 38.0 11.6 93 175-271 304-397 (511)
273 KOG1479 Nucleoside transporter 84.8 43 0.00094 33.1 15.4 49 151-199 33-82 (406)
274 PF11947 DUF3464: Protein of u 81.4 4.1 8.9E-05 34.5 5.6 34 244-277 111-144 (153)
275 PF05631 DUF791: Protein of un 80.7 58 0.0013 31.7 15.7 64 135-198 118-188 (354)
276 COG4262 Predicted spermidine s 74.4 90 0.002 30.6 16.5 116 139-254 10-132 (508)
277 COG1079 Uncharacterized ABC-ty 69.9 1E+02 0.0022 29.3 12.6 88 184-278 22-109 (304)
278 TIGR00939 2a57 Equilibrative N 66.2 1.2E+02 0.0026 30.3 12.8 42 231-277 110-151 (437)
279 COG5336 Uncharacterized protei 65.5 16 0.00035 28.9 5.0 18 180-197 53-70 (116)
280 PRK10263 DNA translocase FtsK; 63.9 1E+02 0.0022 35.2 12.4 18 274-292 142-159 (1355)
281 COG3619 Predicted membrane pro 62.6 1.2E+02 0.0026 27.5 19.7 41 156-196 40-82 (226)
282 KOG1479 Nucleoside transporter 62.1 16 0.00035 36.1 5.5 106 174-287 287-401 (406)
283 PF06912 DUF1275: Protein of u 60.1 1.2E+02 0.0026 26.7 17.8 20 273-292 171-190 (209)
284 PF02487 CLN3: CLN3 protein; 59.3 75 0.0016 31.5 9.6 50 209-259 93-143 (402)
285 KOG4332 Predicted sugar transp 58.9 1.4E+02 0.003 28.4 10.5 94 174-271 287-388 (454)
286 PF13000 Acatn: Acetyl-coenzym 56.4 31 0.00068 35.2 6.4 127 157-284 21-174 (544)
287 PF02990 EMP70: Endomembrane p 56.1 95 0.0021 31.9 10.2 55 143-197 264-321 (521)
288 COG4603 ABC-type uncharacteriz 52.9 1.2E+02 0.0026 29.5 9.7 32 229-260 113-144 (356)
289 PF12832 MFS_1_like: MFS_1 lik 50.6 98 0.0021 22.7 8.7 30 262-292 34-63 (77)
290 PF06813 Nodulin-like: Nodulin 50.2 1.3E+02 0.0029 27.6 9.2 28 263-292 37-64 (250)
291 PF03547 Mem_trans: Membrane t 49.5 1.7E+02 0.0038 28.2 10.6 22 129-150 238-259 (385)
292 PF14851 FAM176: FAM176 family 42.0 56 0.0012 27.7 4.9 29 13-41 19-47 (153)
293 COG5336 Uncharacterized protei 37.4 90 0.0019 24.8 5.0 31 261-292 40-70 (116)
294 KOG0637 Sucrose transporter an 34.7 1.8E+02 0.004 29.5 7.9 31 261-292 442-472 (498)
295 PF02990 EMP70: Endomembrane p 33.4 1.3E+02 0.0028 30.9 7.0 10 280-289 313-322 (521)
296 TIGR00880 2_A_01_02 Multidrug 33.0 2.2E+02 0.0048 21.7 8.1 24 174-197 92-115 (141)
297 COG1288 Predicted membrane pro 32.8 5.3E+02 0.011 26.0 11.3 27 252-278 410-442 (481)
298 COG4298 Uncharacterized protei 31.0 1.8E+02 0.0039 22.0 5.4 36 325-360 43-78 (95)
299 KOG2601 Iron transporter [Inor 29.8 5.8E+02 0.013 25.5 10.6 14 279-292 190-203 (503)
300 PTZ00370 STEVOR; Provisional 29.7 4.7E+02 0.01 24.6 9.2 31 325-355 257-287 (296)
301 TIGR00769 AAA ADP/ATP carrier 29.7 6.1E+02 0.013 25.7 22.6 55 237-292 276-331 (472)
302 KOG3574 Acetyl-CoA transporter 28.7 5.9E+02 0.013 25.6 10.0 53 239-292 381-433 (510)
303 TIGR01666 YCCS hypothetical me 25.5 8.5E+02 0.019 26.1 11.6 32 209-240 61-94 (704)
304 PF01102 Glycophorin_A: Glycop 24.5 99 0.0021 25.2 3.5 10 328-337 70-79 (122)
305 KOG3097 Predicted membrane pro 24.3 1.7E+02 0.0037 28.5 5.5 59 184-252 73-135 (390)
306 PHA03237 envelope glycoprotein 24.2 7.3E+02 0.016 24.8 11.0 26 234-259 258-283 (424)
307 PF06645 SPC12: Microsomal sig 23.1 3.1E+02 0.0068 20.1 5.8 18 325-342 34-51 (76)
308 cd02433 Nodulin-21_like_2 Nodu 22.5 3E+02 0.0066 25.0 6.7 12 188-199 195-206 (234)
309 PF02937 COX6C: Cytochrome c o 21.4 2.7E+02 0.0059 20.4 4.9 16 345-360 38-53 (73)
310 PHA02819 hypothetical protein; 20.5 2.8E+02 0.006 20.2 4.6 27 316-342 35-61 (71)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-36 Score=308.74 Aligned_cols=292 Identities=19% Similarity=0.280 Sum_probs=230.1
Q ss_pred eEEeeeccccccchHHHHHHHHHHH-HHHHhh-hhhhhhcccccCCCCCcccccccccCcCcCCCccchhhhhhhccccC
Q 017754 2 LAVLLLEDLEVANQNVLTVLAVGLI-IIILLP-VTIPVVLVFFTEPPPPVEETLLAETNKGEASKSEDYQEEVILSEVED 79 (366)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~-~ll~~p-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (366)
++.+++++.++++++.+..++++++ ++|++| +++|++. +.+.++++ + ++. + . .+ +.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~-~~~~~~~~--~-----~~~---~----~-~~------~~ 317 (591)
T PTZ00207 260 PLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT-FDGKRPHD--D-----SDG---K----A-KE------HV 317 (591)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCcCC--C-----ccc---c----c-cc------cc
Confidence 4567788889999999999999888 888889 8888876 22211100 0 000 0 0 00 00
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCCCCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcH
Q 017754 80 EKPPEVDSLPASERQKRIAHLQAKLFQAAAEGAVRVKRRKGPRRGEDFTLPQALMKADFLLLFFSLVLASGSGLTVIDNL 159 (366)
Q Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l 159 (366)
+...+.+ .++.+. ...+.+...|++++ +++|.+++.|||++++.++|+.+++.++++|+
T Consensus 318 ~~~~~~~-~~~~~~------------------~~~~~~~~~P~~~~--t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~ 376 (591)
T PTZ00207 318 EAGEEVS-AAEDKV------------------VETDVDYIAPQFQE--TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNA 376 (591)
T ss_pred ccccccc-cccccc------------------ccccccCCCCCCcc--hHHHHHhchhHHHHHHHHHHhhCchheeeecH
Confidence 0000000 000000 00000112244544 99999999999999999999999999999999
Q ss_pred HHHHHHh-CC-Chh--HH-HHHHHHHHHhhhhhhhhhhhhhhhhhcc----CchhHHHHHHHHHHHHHHHHHHhhhh-HH
Q 017754 160 GQICQSL-GY-ADT--SI-YVSMISIWNFLGRVGGGYFSEAIVRKFA----YPRPVAMAVAQVVMAFALLYYAIGWP-GE 229 (366)
Q Consensus 160 ~~i~~~~-g~-s~~--~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~----~~R~~~~~~~~~~~~~~~~l~~~~~~-~~ 229 (366)
.||.+++ |+ .+. .+ +++++++|+++||++.|+++ .+.+|+. +||+.++++.++ +.+++++++...+ ..
T Consensus 377 ~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~ 454 (591)
T PTZ00207 377 RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAA 454 (591)
T ss_pred HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccH
Confidence 9999999 88 334 34 89999999999999999998 5555554 899999999999 8999998887777 78
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCc
Q 017754 230 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 309 (366)
Q Consensus 230 l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~ 309 (366)
+|+..+++|+|+|.+|++.+++++|+|+ |++|+.||+..++.++|+++++..++|.+||++++|
T Consensus 455 L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k--------------- 518 (591)
T PTZ00207 455 LPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADK--------------- 518 (591)
T ss_pred hHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhh---------------
Confidence 9999999999999999999999999999 999999999999999999999999999999999854
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHh
Q 017754 310 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQLY 358 (366)
Q Consensus 310 ~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~~~~ 358 (366)
+++++|+|++||+.+|.+++++|++++++++++..|+|++|++..
T Consensus 519 ----~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~~y~~~~ 563 (591)
T PTZ00207 519 ----LGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRRLCLKAL 563 (591)
T ss_pred ----CCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHHHHHHHH
Confidence 245799999999999999999999999999999999999998653
No 2
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.65 E-value=3.5e-14 Score=141.95 Aligned_cols=194 Identities=15% Similarity=0.143 Sum_probs=135.8
Q ss_pred HhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017754 132 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
.++++.+|.+++..++.....+....++|.+.++ .|++...+ ..+++.++..++++++|+++||+++++.. ...
T Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~---~~~ 325 (452)
T PRK11273 249 VLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG---ATG 325 (452)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc---hHH
Confidence 5678899998888777776667778899999876 68876554 56677888899999999999999543221 111
Q ss_pred HHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHH
Q 017754 209 AVAQVVMAFALLYYA---IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~---~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G 285 (366)
.....+..++.+++. ..+....+++.+++|.+..+........+.|.+|++.+|++.|+.+....+|+.+.+|.+.|
T Consensus 326 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g 405 (452)
T PRK11273 326 VFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 405 (452)
T ss_pred HHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHH
Confidence 111222222222221 11223333444455554433333444567899999999999999998888887644799999
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHhhc
Q 017754 286 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQLYGN 360 (366)
Q Consensus 286 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 360 (366)
+++|..+ |+..|++++++++++++....+...+||..+++..|
T Consensus 406 ~l~~~~g--------------------------------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (452)
T PRK11273 406 YTVDFFG--------------------------------WDGGFMVMIGGSILAVILLIVVMIGEKRHHEELLQK 448 (452)
T ss_pred HHHHHhc--------------------------------chHHHHHHHHHHHHHHHHHHHHhccccchHHHHHhh
Confidence 9999987 999999999999998888877776666666666544
No 3
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.64 E-value=3.3e-14 Score=142.67 Aligned_cols=191 Identities=15% Similarity=0.086 Sum_probs=130.2
Q ss_pred HhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017754 132 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
.++++.+|.+.+..++..........|+|.+.+ .+|++..++ ..++..++..+|++++|+++||++||+.. ..
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~----~~ 329 (467)
T PRK09556 254 VLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRAL----VA 329 (467)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchH----HH
Confidence 678999999988888877777778889998875 489987665 67778889999999999999999987543 11
Q ss_pred HHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhh-hHHhhhhHHHHH
Q 017754 209 AVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPA-GSLIFSGVIASG 286 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~-G~~i~gp~l~G~ 286 (366)
...........+.+.. .+...+++..++.|++..+........+.|.+|.+.+|++.|+.+....+ |+.+ +|.+.|+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~-~~~~~G~ 408 (467)
T PRK09556 330 CIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSF-AKVGLGM 408 (467)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHH-HhhhHHH
Confidence 1111111111122222 23334456666677654444444456777999999999999999999887 6574 9999999
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 287 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 287 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
+.|.+.... ...-+....|+..|++++++++++++..+.+.
T Consensus 409 i~~~~~~g~--------------------~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 409 IADPTKNGT--------------------PIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred Hhccccccc--------------------ccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999321000 00000011399999999888888877766554
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.61 E-value=1.6e-13 Score=136.49 Aligned_cols=183 Identities=18% Similarity=0.149 Sum_probs=124.5
Q ss_pred HhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017754 132 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
.++++.+|.+.+..++.......+..++|++.+ ++|++..+. ..+++.+++.+|++++|+++||+.+++........
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~ 318 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIF 318 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHH
Confidence 567788998877777666666667788999884 578887655 78888899999999999999999543211111111
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHH
Q 017754 209 AVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~ 288 (366)
.++.++..++.+++...+....+...+..|++..+........++|.++++++|+..|+.++...+|..+ +|.+.|++.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~p~~~g~l~ 397 (434)
T PRK11663 319 AAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAAL-SGYPLAKVL 397 (434)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHH-hcccHHHHH
Confidence 2222222222222222222222233333444333333344567789999999999999999999999996 999999999
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 289 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|..+ |+..|++.+++++++++..+...
T Consensus 398 ~~~g--------------------------------~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 398 EIWH--------------------------------WTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred Hhcc--------------------------------cHHHHHHHHHHHHHHHHHHHHHH
Confidence 9877 99999998888777766554443
No 5
>PRK10504 putative transporter; Provisional
Probab=99.61 E-value=4.2e-14 Score=141.67 Aligned_cols=175 Identities=17% Similarity=0.236 Sum_probs=143.0
Q ss_pred hhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017754 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
+.+|++++++++.......+..++|.+.+++|.+..+. ..+.+.++..++.+++|+++||+|||+.. ..+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF------FTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH------HHHHH
Confidence 35788888888887777778889999999999988764 66777888889999999999999998655 44555
Q ss_pred HHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 214 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 214 ~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+.+++.+++. ..+...+++..++.|++.+...+...+.+.|.++.++++.++++.+....+|..+ ||.++|.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~g~l~~~~g 162 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLL-GPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHhhcc
Confidence 5555555544 3445667888999999999988888999999999999999999999999999996 9999999998776
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++...++.++.++.....++
T Consensus 163 --------------------------------w~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 163 --------------------------------WHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999888777776666554433
No 6
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.60 E-value=3.8e-14 Score=136.08 Aligned_cols=174 Identities=26% Similarity=0.317 Sum_probs=135.4
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+.++.++++.+|.+...+++..........+.+++.+++|++.... ..++..+...++++..|+++||++||+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~--- 273 (377)
T TIGR00890 197 TVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTM--- 273 (377)
T ss_pred hHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh---
Confidence 4567888999998877776665555555566777888888876554 77888899999999999999999987655
Q ss_pred HHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 206 VAMAVAQVVMAFALLYYAIGW---PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~~---~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+.++++++.+++...+ ...++...++.|++.|..++..+.+++|.+|.+++++.+|+.+....+|..+ +|.
T Consensus 274 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-~~~ 349 (377)
T TIGR00890 274 ---SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIF-GGL 349 (377)
T ss_pred ---hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHH-HHH
Confidence 555556666555544222 1223345567788888888888889999999999999999999999999996 999
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHH
Q 017754 283 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAM 340 (366)
Q Consensus 283 l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~ 340 (366)
++|.+.|..+ |+..|.+.+++++++.
T Consensus 350 ~~g~l~~~~g--------------------------------~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 350 IASHALTEIG--------------------------------FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHhhhc--------------------------------hhhHHHHHHHHHHHhc
Confidence 9999999877 9999988887666654
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.59 E-value=7.8e-14 Score=134.14 Aligned_cols=190 Identities=14% Similarity=0.126 Sum_probs=146.4
Q ss_pred HHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017754 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
-.++|+..|++.++.++.+..-+++.+|.|.++.+ .|++..++ ..+++-+++..|.+++||+|||+-+.+.. ..
T Consensus 247 YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~---p~ 323 (448)
T COG2271 247 YVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG---PM 323 (448)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc---hH
Confidence 46789999999999999999999999999998865 68887665 89999999999999999999998432222 12
Q ss_pred HHHHHHHHHHHHHHHH-hh--hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhh-hHHhhhhHH
Q 017754 208 MAVAQVVMAFALLYYA-IG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPA-GSLIFSGVI 283 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~-~~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~-G~~i~gp~l 283 (366)
..+.++...++...+. .+ +.....++.+++|+...+..-+....+.|..|.+..|++.|+......+ |+. ++...
T Consensus 324 ~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~-~a~~~ 402 (448)
T COG2271 324 ALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAA-LAGLP 402 (448)
T ss_pred HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHH-hcCCc
Confidence 2333333333333333 22 2345566777888886665566667788999999999999999999999 666 58888
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchHHHHH
Q 017754 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQ 356 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~~ 356 (366)
.|++.|.++ |...|.++.+.++++.++.+.+..+.++.+++
T Consensus 403 ~g~i~d~~g--------------------------------W~g~Fi~~~~~a~l~~lll~~~~~~~~~~~~~ 443 (448)
T COG2271 403 LGYIADTWG--------------------------------WDGGFIVLSIAALLAILLLLPVWNAEERKIRD 443 (448)
T ss_pred ceeeEecCC--------------------------------CcchHHHHHHHHHHHHHHHHHHHhhcchhhhh
Confidence 999999876 99999999998988888887777666555543
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.59 E-value=9.2e-14 Score=138.18 Aligned_cols=172 Identities=10% Similarity=0.149 Sum_probs=137.2
Q ss_pred hhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017754 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
..++..++.+++.......+...+|++.+++|++..+. ..+.+.++..++++..|+++||+|||+.+ .++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~------~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM------GIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH------HHHHH
Confidence 34455556666666555566778999999999987765 78888999999999999999999998765 66677
Q ss_pred HHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 214 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 214 ~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+.+++.++.. ..+...+++..++.|++.|..++...+++++.++.++++++.++.+.+..+|+.+ +|.+.|++.+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~~~~~l~~~~g 175 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGAL-IPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccc
Confidence 7777666655 3345566677788899888888888889999999999999999999999999996 9999999988766
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|++.|++.++++++.++...+.
T Consensus 176 --------------------------------w~~~f~~~~i~~~~~~~~~~~~ 197 (434)
T PRK11663 176 --------------------------------WRYGMMIAGIIAIVVGLFLCWR 197 (434)
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887766554444433
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.58 E-value=9.3e-14 Score=135.90 Aligned_cols=171 Identities=11% Similarity=0.124 Sum_probs=134.5
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+|.+.++.++...........+|++.+++|.+..+. ..+.+.++..++.+..|+++||+|||+.+ ..+.++.
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~ 84 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL------IGLFVLF 84 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH------HHHHHHH
Confidence 444444433332233334456899999999988776 77888888899999999999999998765 6667777
Q ss_pred HHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhh
Q 017754 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 294 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~ 294 (366)
+++.++.. ..+...+++++++.|++.+..++...++++|+++.++|+.+.|+...+..+|..+ +|.+++.+.+..+
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~i-g~~l~~~l~~~~g-- 161 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVL-GLPLGRVIGQYLG-- 161 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHH-HhhHHHHHHHHhc--
Confidence 77766655 4556678888899999988888888889999999999999999999999999996 9999999988776
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 295 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|++.|++.++++++..+......
T Consensus 162 ------------------------------w~~~f~~~~~~~~l~~~~~~~~~ 184 (390)
T PRK03545 162 ------------------------------WRTTFLAIGGGALITLLLLIKLL 184 (390)
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999988777665554443
No 10
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.58 E-value=7.7e-14 Score=137.90 Aligned_cols=180 Identities=12% Similarity=0.055 Sum_probs=139.6
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
.++++++.+++.+..........|.+.+++|.+..+. ..+.+.++..++.+..|+++||+|||+.+ .++.++
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~------~~~~~~ 82 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI------AGIMVL 82 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH------HHHHHH
Confidence 3455566666666666666667788889999988776 78889999999999999999999998765 666667
Q ss_pred HHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhh
Q 017754 215 MAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAE 293 (366)
Q Consensus 215 ~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~ 293 (366)
.+++.++.+ ..+...+++.+++.|++.++.++....+++|.+++++|+.+.++.+...++|..+ +|.+++++.+..+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~- 160 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL-GLILSGYILALDG- 160 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCC-
Confidence 676666655 3556678889999999999988888888999999999999999999999999996 9999998875321
Q ss_pred hhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 294 KQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
..+...||++|++.++.+++.+++..++.++
T Consensus 161 -------------------------~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 161 -------------------------LMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred -------------------------CCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 0000129999999887777665555554443
No 11
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.58 E-value=1.5e-13 Score=132.95 Aligned_cols=173 Identities=14% Similarity=0.178 Sum_probs=154.7
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
..+.+.++.|+.....+.....+|++.+++|.+...+ .++.+..+..++.++...++||+.||+.. ...+.+
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL------l~~l~l 87 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLL------LGLLAL 87 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH------HHHHHH
Confidence 4566667777777777888899999999999998776 99999999999999999999999888765 777888
Q ss_pred HHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhh
Q 017754 215 MAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAE 293 (366)
Q Consensus 215 ~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~ 293 (366)
+.++.++.+ .++...+.+++++.|+..|..|++..++++++.|+++++.+.++++++..++..+ |.+++.++-|..|
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~-GvPLGt~ig~~~G- 165 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVL-GVPLGTFLGQLFG- 165 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHH-hccHHHHHHHHhh-
Confidence 888888877 4567788999999999999999999999999999999999999999999999996 9999999999998
Q ss_pred hhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 294 KQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
||.+|++.+++++++.+..+...+
T Consensus 166 -------------------------------WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 -------------------------------WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred -------------------------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999998887777666
No 12
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.58 E-value=4.8e-13 Score=128.74 Aligned_cols=187 Identities=14% Similarity=0.090 Sum_probs=130.6
Q ss_pred CCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017754 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
.+.++.++++++|.+.+..++.......+..++|++.++ +|++.... ..+...+++.++++++|+++||++||+...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 285 (399)
T TIGR00893 206 YQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSL 285 (399)
T ss_pred cchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Confidence 346778889999988888888777777788888988754 68876554 677788899999999999999999986220
Q ss_pred --hhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 204 --RPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 204 --R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
.......+.++..+..............+...+.+.+..+..+...++++|.+|++++|+.+++.+....+|..+ +|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~-~~ 364 (399)
T TIGR00893 286 VFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIV-GP 364 (399)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhh-hh
Confidence 000111111111111111111112222333333333333367888889999999999999999999999999996 99
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017754 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 282 ~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
.+.|++.|..+ +|+..|++.+++++++.+..++
T Consensus 365 ~i~g~l~~~~g-------------------------------~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 365 IVIGAIAATTG-------------------------------SFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHhhhhccCCC-------------------------------chhHHHHHHHHHHHHHHHHHHH
Confidence 99999999875 3888998888877777665543
No 13
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.57 E-value=1.1e-13 Score=140.00 Aligned_cols=182 Identities=22% Similarity=0.292 Sum_probs=155.6
Q ss_pred HHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017754 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
.+.++++.|+++.+...+...........+|.+.++.|+++... .+++.++.+.+||++.|+++|+... ++.+.
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~----~~~~~ 367 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGI----RALVL 367 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcccc----chHHH
Confidence 47889999999999988888888888889999999999988766 8999999999999999999999863 23345
Q ss_pred HHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHH
Q 017754 208 MAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~ 286 (366)
..++.++.+++.+.+.. .+...+....+++|++.|...++.+.++.|+.+.+.+..++|+..+...++.++ ||+++|+
T Consensus 368 ~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~-gpPiag~ 446 (509)
T KOG2504|consen 368 FLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALV-GPPIAGL 446 (509)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHc-Cccccee
Confidence 56677777777655553 344577888899999999999988889999999999999999999999999996 9999999
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 287 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 287 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
++|.++ +|...|+..+++.+++.++.++..
T Consensus 447 ~~d~tg-------------------------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 447 LYDITG-------------------------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeeccC-------------------------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 999998 499999999988888777766655
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.57 E-value=1.4e-13 Score=139.30 Aligned_cols=173 Identities=11% Similarity=0.091 Sum_probs=141.5
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+..+.+++++.......+...+|++.+++|.+..+. ..+.+.++..++.+.+|+++||+|||+.+ ..+.++.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l------~~~~~~~ 81 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL------MLGGTLF 81 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHH
Confidence 445566777777777778888999999999876554 78888899999999999999999998776 6777777
Q ss_pred HHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhh-CCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhh
Q 017754 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELF-GLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAE 293 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f-~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~ 293 (366)
.++.++++ ..+...+++++++.|+|.+...+.....+.+.+ ++++|+.+.|+......+|..+ ||.++|++.+..+
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~-gp~lgg~l~~~~g- 159 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF-GPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhccCC-
Confidence 77777766 456677888999999999887777777777776 5688999999999999999996 9999999998876
Q ss_pred hhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 294 KQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
||+.|++...+++++.++.....++
T Consensus 160 -------------------------------wr~~f~i~~~~~~~~~~l~~~~l~~ 184 (495)
T PRK14995 160 -------------------------------WGSVFLINVPIVLVVMGLTARYVPR 184 (495)
T ss_pred -------------------------------hHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999888877776665555443
No 15
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.57 E-value=1.7e-13 Score=143.74 Aligned_cols=163 Identities=16% Similarity=0.143 Sum_probs=123.2
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHH
Q 017754 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEI 230 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l 230 (366)
.+...+|.+.+++|.+.... +.+.+.++.++|.+++|+++||+|||+.+ .++.++.+++.++.+ ..+...+
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l------ii~lil~~i~~ll~afa~s~~~l 258 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL------LICLSVNGFFAFFSSFVQGYGFF 258 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHHHHHHHHHHHHHHHHhhHHHH
Confidence 35556788888999887654 78888999999999999999999998765 455555555555544 3455678
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcc
Q 017754 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVS 310 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~ 310 (366)
++++++.|++.|+..+..+++++|++|.+.||..++++.+...+|..+ ++.+++.+....+...
T Consensus 259 lv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~il-a~~la~~il~~~G~~~--------------- 322 (742)
T TIGR01299 259 LFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIY-AAAMAWAIIPHYGWSF--------------- 322 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccchh---------------
Confidence 889999999999999999999999999999999999999999999996 8888877765543110
Q ss_pred cCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 017754 311 FRDQETPTCLGSICYSITCGIMAGLCIIAMVM 342 (366)
Q Consensus 311 ~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~ 342 (366)
.. ...+....||+.|++.++.++++.++
T Consensus 323 -~~---g~~~~~~gWR~l~~i~~lp~ll~ll~ 350 (742)
T TIGR01299 323 -QM---GSAYQFHSWRVFVIVCAFPCVFAIGA 350 (742)
T ss_pred -cc---ccccccccHHHHHHHHHHHHHHHHHH
Confidence 00 01122345999888777655555443
No 16
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.57 E-value=2.1e-13 Score=134.06 Aligned_cols=153 Identities=12% Similarity=0.173 Sum_probs=127.7
Q ss_pred hHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhh
Q 017754 151 SGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWP 227 (366)
Q Consensus 151 ~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~ 227 (366)
..+.....+|++.+++|++..+. .++...++..+++++.|+++||+|||+.+ ..+.++.+++.++.. ..+.
T Consensus 35 ~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~------~~~~~~~~~~~~~~~~~~~~ 108 (394)
T PRK10213 35 VEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVV------ILFAVLLTLSCLLVSFANSF 108 (394)
T ss_pred HHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHH------HHHHHHHHHHHHHHHHHChH
Confidence 33445557888999999988765 77888999999999999999999998766 666666666666655 3456
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCC
Q 017754 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 307 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~ 307 (366)
..+++++++.|++.|..++...++++|+++.++++.+.++...+.++|..+ +|.+++++.+..+
T Consensus 109 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~i-g~~l~~~l~~~~g--------------- 172 (394)
T PRK10213 109 SLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVI-AAPLGSFLGELIG--------------- 172 (394)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcC---------------
Confidence 678889999999999989999999999999999999999999999999996 9999999998776
Q ss_pred CcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 017754 308 PVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 342 (366)
Q Consensus 308 ~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~ 342 (366)
|++.|++.+++++++.+.
T Consensus 173 -----------------w~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 173 -----------------WRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred -----------------HHHHHHHHHHHHHHHHHH
Confidence 999999888766654433
No 17
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.56 E-value=1.8e-13 Score=134.43 Aligned_cols=185 Identities=11% Similarity=0.051 Sum_probs=137.8
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
..+.++++++|.+.+.+++.......+.+++|.+.+++|++.... ..+++.++..+|+++.|+++||++||+..
T Consensus 198 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~---- 273 (393)
T PRK09705 198 PVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLL---- 273 (393)
T ss_pred CcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHH----
Confidence 345667888888877776666666678889999998899887654 78899999999999999999999886544
Q ss_pred HHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhC-CCchhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 207 AMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-~~~~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
..+..+.+++.+++. .+.... .+..++.|++.+..++.......+.++ .+++|+.+|+.+....+++.+ +|.+.
T Consensus 274 --~~~~~l~~~~~~~~~~~~~~~~-~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~-gp~~~ 349 (393)
T PRK09705 274 --MLALVLQLVGFCGFIWLPLQLP-VLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGL-APWFS 349 (393)
T ss_pred --HHHHHHHHHHHHHHHHccchHH-HHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 344444444444332 221111 122345677777777777767777775 467899999999999999996 99999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchH
Q 017754 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
|++.|..+ +|...|++.+++++++.++.+.+.++++.
T Consensus 350 G~l~~~~g-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 350 GVLRSISG-------------------------------NYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHhC-------------------------------CchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999987 38999998888888877776666666554
No 18
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.56 E-value=1.9e-13 Score=133.57 Aligned_cols=171 Identities=11% Similarity=0.086 Sum_probs=140.4
Q ss_pred hhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017754 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
+.+|.+.+..++...........+|.+.+++|++.... ..+...++..++++.+|+++||+|||+.+ .++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL------LFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH------HHHHH
Confidence 34676666766666666677788999999999987765 88999999999999999999999998766 66666
Q ss_pred HHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 214 VMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 214 ~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+.+++.++.. ..+...+++.+++.|++.+...+....+++++++.++++.+.+....+..+|..+ +|.+++++.+..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLL-GIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHH-hccHHHHHhhhcc
Confidence 6677766665 4556778889999999998888888888999999999999999999999999996 9999999988766
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017754 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
||++|++.++++++..+....
T Consensus 156 --------------------------------wr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 156 --------------------------------WRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred --------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999988877666554443
No 19
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.55 E-value=2e-13 Score=130.64 Aligned_cols=169 Identities=11% Similarity=-0.009 Sum_probs=131.7
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017754 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
|.++++.++...........+|.+..+++.+.... ..++..++..++.+.+|+++||+|||+.+ ..+.++.+
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~------~~~~~~~~ 75 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM------IGADLIRA 75 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH------HHHHHHHH
Confidence 44555555555555556667788888888887665 78888899999999999999999998755 44544444
Q ss_pred HHHHHHH-hh-----hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 217 FALLYYA-IG-----WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 217 ~~~~l~~-~~-----~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
++.+++. .. +...+++..++.|++.+...+...++++|+++.++|+..+++.+....+|..+ ||.+++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~ 154 (365)
T TIGR00900 76 VLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIV-GPGIGGLMYAT 154 (365)
T ss_pred HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4444333 22 45667888899999999988999999999999999999999999999999996 99999999988
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.+ |++.|++.++.++++.+..+.+
T Consensus 155 ~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 155 LG--------------------------------IKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred hh--------------------------------HHHHHHHHHHHHHHHHHHHHhc
Confidence 76 9999988877666655444433
No 20
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.54 E-value=3.7e-13 Score=133.17 Aligned_cols=161 Identities=13% Similarity=0.084 Sum_probs=128.9
Q ss_pred hhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhh
Q 017754 150 GSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGW 226 (366)
Q Consensus 150 ~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~ 226 (366)
.....+...+|++.+++|.+.... .++++.++..++++.+|+++||+|||+.+ ..+.++.+++.++.. ..+
T Consensus 30 ~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l------~~~~~~~~~~~~~~~~a~~ 103 (413)
T PRK15403 30 LTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL------ITGALIFTLACAATLFTTS 103 (413)
T ss_pred HHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH------HHHHHHHHHHHHHHHHcCC
Confidence 344456677889999999887665 88999999999999999999999998755 556666666666655 345
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCC
Q 017754 227 PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNM 306 (366)
Q Consensus 227 ~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~ 306 (366)
...+++++++.|++.+...+..++++.|.++.++++.+.++.+....+|..+ ||.+++.+.+..+
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~lg~~l~~~~g-------------- 168 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPII-GPLSGAALMHFVH-------------- 168 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcC--------------
Confidence 5678889999999887666667788999999999999999999999999996 9999999887655
Q ss_pred CCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 307 LPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 307 ~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.+++.+++.+..+...++
T Consensus 169 ------------------w~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 169 ------------------WKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999988877776554443333
No 21
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.54 E-value=3.6e-13 Score=130.41 Aligned_cols=160 Identities=11% Similarity=0.115 Sum_probs=130.5
Q ss_pred hhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhh
Q 017754 150 GSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGW 226 (366)
Q Consensus 150 ~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~ 226 (366)
.....+...+|.+.+++|.+..+. ..+...++..++.+++|+++||+|||+.. ..+.++.+++.++.. ..+
T Consensus 19 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~~~~~~~~~~~~~~~~ 92 (385)
T TIGR00710 19 LGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL------LLGLFIFALSSLGLALSNN 92 (385)
T ss_pred HHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH------HHHHHHHHHHHHHHHHHcc
Confidence 344456667899999999987765 78888899999999999999999987655 556666666666655 344
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCC
Q 017754 227 PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNM 306 (366)
Q Consensus 227 ~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~ 306 (366)
...+++..++.|++.+...+...+++.|.++.++++..+++.+....+|..+ +|.++|++.+..+
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~~-------------- 157 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAV-APLLGGYILVWLS-------------- 157 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC--------------
Confidence 5567778889999999888889999999999999999999999999999996 9999999988776
Q ss_pred CCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 307 LPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 307 ~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|+..|++.+++++++.+...+..+
T Consensus 158 ------------------~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 158 ------------------WHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999888877776666555443
No 22
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.54 E-value=3.3e-13 Score=132.34 Aligned_cols=172 Identities=14% Similarity=0.087 Sum_probs=126.7
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
.+.++..+++.......+..++|.+.++.|++.... ..+...++..+++++.|+++||++||+.. .+..+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~------~~~~~~~ 295 (406)
T PRK11551 222 TLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV------LLIYAGI 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH------HHHHHHH
Confidence 344444444444455566778999999999876654 77788889999999999999999987544 3334444
Q ss_pred HHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhh
Q 017754 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 294 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~ 294 (366)
+++.+++. ..+...+++..++.|++.++..+..+++++|.+|.+++|+..|+.+....+|+.+ ||.++|+++|..+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-g~~~~g~l~~~~~-- 372 (406)
T PRK11551 296 LASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMA-GPLLAGQLLALGR-- 372 (406)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHH-HhhhHhhhhccCC--
Confidence 44444433 2334455566677788877777888899999999999999999999999999996 9999999998764
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 295 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
.|...+++.+.+.+++.++.+.+.
T Consensus 373 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 373 -----------------------------STVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred -----------------------------chHHHHHHHHHHHHHHHHHHHHHh
Confidence 277777777766666666555443
No 23
>PRK10054 putative transporter; Provisional
Probab=99.53 E-value=6e-13 Score=130.83 Aligned_cols=171 Identities=11% Similarity=0.042 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
++|.+.+..++..........++|.+. +++|++..++ ..++..+...++++..|+++||+|||+.. ..+.+
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~------~~~~~ 81 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM------LLAIT 81 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH------HHHHH
Confidence 477777777777776667777777766 5689988776 77778888999999999999999998655 45555
Q ss_pred HHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 214 VMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 214 ~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+.+++.+++.. ++...++++..+.|.+.+...+...++.+|.++++++++++|+.+...++|..+ ||.+++++++ .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~i-gp~l~~~l~~-~g 159 (395)
T PRK10054 82 AFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTV-GPPLGTLLVM-QS 159 (395)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-hc
Confidence 55565555543 334445555666676666666777888999999999999999999999999996 9999999874 44
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|+..|++.+++++++.++..+..
T Consensus 160 --------------------------------~~~~f~~~~~~~~i~~i~~~~~~ 182 (395)
T PRK10054 160 --------------------------------INLPFWLAAICSAFPLVFIQIWV 182 (395)
T ss_pred --------------------------------cCcHHHHHHHHHHHHHHHHHHHH
Confidence 89999988877777655554443
No 24
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.53 E-value=1.9e-13 Score=137.00 Aligned_cols=171 Identities=12% Similarity=0.168 Sum_probs=139.1
Q ss_pred HHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHH
Q 017754 140 LLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAF 217 (366)
Q Consensus 140 ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~ 217 (366)
.+.++.++...........+|.+.+++|.+..+. ..+.+.++..++.++.|+++||+|||+.+ ..+.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~ 79 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF------LISTFAFTL 79 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH------HHHHHHHHH
Confidence 3444555555555666778999999999987654 78888999999999999999999998765 666667777
Q ss_pred HHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhh
Q 017754 218 ALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQA 296 (366)
Q Consensus 218 ~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~ 296 (366)
+.++.. ..+...+++++++.|++.+...+...++++|.+++++|+.+.++..+...+|..+ ||.++|++.+..+
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~~---- 154 (485)
T TIGR00711 80 GSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPAL-GPTLGGWIIENYH---- 154 (485)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhh-hhccHhHhccCcC----
Confidence 766665 3455677888999999999988999999999999999999999999999999996 9999999988766
Q ss_pred hhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 297 GLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.+.+++++.++.++..++
T Consensus 155 ----------------------------w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 155 ----------------------------WRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred ----------------------------ceehhhhhhHHHHHHHHHHHHHcCC
Confidence 9999999888777766665555443
No 25
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.53 E-value=1e-13 Score=132.20 Aligned_cols=165 Identities=18% Similarity=0.245 Sum_probs=132.4
Q ss_pred HHHHHhhhhHHHHHhcHH-HHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHH
Q 017754 143 FSLVLASGSGLTVIDNLG-QICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFAL 219 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~-~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~ 219 (366)
++.++.......+...+| .+.+++|.+..+. ..+...++..++.+..|+++||+|||+.. ..+.++.+++.
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l------~~~~~~~~~~~ 76 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVL------IIGLLLFALGS 76 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE------eehhhhhhhHH
Confidence 344444455555666777 6778899887765 78888999999999999999999987754 66677766664
Q ss_pred HHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhh
Q 017754 220 LYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGL 298 (366)
Q Consensus 220 ~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~ 298 (366)
++... .+...++++.++.|++.+...+...++++|.++.++|+..+++......+|..+ +|.+++++.+..+
T Consensus 77 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l~~~l~~~~~------ 149 (352)
T PF07690_consen 77 LLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSIL-GPLLGGFLISYFG------ 149 (352)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHH-HHHHHHHCCCHCH------
T ss_pred HHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhc-ccchhhhhhhccc------
Confidence 44333 444578889999999999999999999999999999999999999999999996 9999999997776
Q ss_pred hhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 299 LWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|++.|++.+++++++.++...+
T Consensus 150 --------------------------~~~~~~~~~~~~~~~~il~~~~ 171 (352)
T PF07690_consen 150 --------------------------WRWAFLISAILSLIAAILFILF 171 (352)
T ss_dssp --------------------------HCCHHHHHHHHHHHHHHHHHCC
T ss_pred --------------------------cccccccccchhhhhhhhHhhh
Confidence 9999999998888887654333
No 26
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.53 E-value=3.9e-13 Score=134.70 Aligned_cols=177 Identities=16% Similarity=0.174 Sum_probs=133.1
Q ss_pred HHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017754 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
+.++++.+|.+.+..++..........++|.+.+++|++.... ..++.+++..++++++|+++||...+. .|...+
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~~~~~ 313 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRP--HVQYLF 313 (455)
T ss_pred HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCH--HHHHHH
Confidence 5778888998777766666655666678888888899987665 788888999999999999999742211 111222
Q ss_pred HHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHH
Q 017754 209 AVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l 287 (366)
..+.++.+++++++. ..+...+++..++.|++++...+..++++.|.++++++|+.+|+.+....+|..+ ||.++|++
T Consensus 314 ~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~i-gp~i~G~l 392 (455)
T TIGR00892 314 SFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLI-GPPLAGRL 392 (455)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHc-cccceeee
Confidence 333333334333333 3344556677888899999888888999999999999999999999999999996 99999999
Q ss_pred HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHH
Q 017754 288 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMV 341 (366)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~ 341 (366)
.|..+ .|+..|++.+++++++++
T Consensus 393 ~~~~g-------------------------------~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 393 VDATK-------------------------------NYKYIFYASGSIVVSAGL 415 (455)
T ss_pred ehhcC-------------------------------CcchHHHHhhHHHHHHHH
Confidence 99875 288888888877666554
No 27
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.51 E-value=1.3e-12 Score=128.10 Aligned_cols=172 Identities=17% Similarity=0.104 Sum_probs=130.4
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017754 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
.+.++..++............|.+.+++|++..+. ..+...++..++.+..|+++||+|||+.. ..+.++..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~ 91 (406)
T PRK11551 18 GLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL------IVSVALFG 91 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH------HHHHHHHH
Confidence 33334444444444445556788899999987765 78888899999999999999999998766 45555555
Q ss_pred HHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhh
Q 017754 217 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQ 295 (366)
Q Consensus 217 ~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~ 295 (366)
++.++.. ..+...+++..++.|++.+...+...++++|.+++++++++.++.+....+|..+ +|.+++.+.+..+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~--- 167 (406)
T PRK11551 92 LFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGAL-ASVIGVLAAGDAA--- 167 (406)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHccccC---
Confidence 5554444 3455677888899999999888888999999999999999999999999999996 8988887776655
Q ss_pred hhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 296 AGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|+..|++.+++.++..++...+.++
T Consensus 168 -----------------------------~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 168 -----------------------------WRHIFYVGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred -----------------------------HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999998876666555544443333
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.51 E-value=3.3e-13 Score=129.91 Aligned_cols=160 Identities=18% Similarity=0.154 Sum_probs=131.8
Q ss_pred hhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hh
Q 017754 149 SGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IG 225 (366)
Q Consensus 149 ~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~ 225 (366)
......+....|++.+++|++..+. ..+...++..++.++.|+++||+|||+.. ..+.++.+++..+++ ..
T Consensus 7 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~------~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 7 YLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL------AVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred HHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee------HHHHHHHHHHHHHHHHHc
Confidence 3444556667788888999987765 88889999999999999999999998877 566666666665555 34
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCC
Q 017754 226 WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN 305 (366)
Q Consensus 226 ~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~ 305 (366)
+...+++++++.|++.+..++....+++|.++.++|+...++......+|..+ +|.+++++.+..+
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~------------- 146 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGII-GGPLVGWILIHFS------------- 146 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHH-HHHHHHHHHHhCC-------------
Confidence 56678888999999999989999999999999999999999999999999996 9999999988776
Q ss_pred CCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 306 MLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 306 ~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|++.|++.++++++..++.+.+.
T Consensus 147 -------------------~~~~~~~~~~~~~~~~~~~~~~~ 169 (399)
T TIGR00893 147 -------------------WQWAFIIEGVLGIIWGVLWLKFI 169 (399)
T ss_pred -------------------chHHHHHHHHHHHHHHHHhhhee
Confidence 99999988887777666555443
No 29
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.51 E-value=3.5e-13 Score=129.68 Aligned_cols=184 Identities=16% Similarity=0.128 Sum_probs=139.5
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
++...++++.|.+.+.|+...++...+..++|++.++ +|.+..++ +.++..+.+.+.|+++|++|||+|.++..
T Consensus 211 ~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~--- 287 (417)
T COG2223 211 LKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVT--- 287 (417)
T ss_pred HHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHH---
Confidence 5567789999999999999999999999999998865 79887764 88888999999999999999999887665
Q ss_pred HHHHHHHHHHHHHHHHHHhh-------h-hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHH
Q 017754 206 VAMAVAQVVMAFALLYYAIG-------W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~-------~-~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
......++++..++... . ....+...+..+++.|......+..++.+|+ ++.|...|+..+.+.+|++
T Consensus 288 ---~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf 363 (417)
T COG2223 288 ---LAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGF 363 (417)
T ss_pred ---HHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhcccccc
Confidence 44444444444443321 1 1222222333444444444555556666673 4889999999999999999
Q ss_pred hhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhch
Q 017754 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 278 i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r 351 (366)
. =|...|..+|.++ +|..+|+++..+.+++.+.....+.|.|
T Consensus 364 ~-lp~~~g~~~~~tg-------------------------------~~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 364 F-LPLAFGVSLDLTG-------------------------------SYTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred c-hhHHHHHHHHhcc-------------------------------cHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 6 5999999999998 4999999999999888887777665543
No 30
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.50 E-value=6.2e-13 Score=127.68 Aligned_cols=163 Identities=14% Similarity=0.209 Sum_probs=127.9
Q ss_pred HHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHH
Q 017754 145 LVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY 222 (366)
Q Consensus 145 ~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~ 222 (366)
..+..+..+.....+|.+.+++|.+..+. ..+.+.++..++.+.+|+++||+|||+.+ ..+.++.+++.++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~------~~~~~~~~~~~~~~ 85 (377)
T TIGR00890 12 MCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVA------MLGGILYGLGFTFY 85 (377)
T ss_pred HHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchh------HHhHHHHHHHHHHH
Confidence 33333444556677899999999988776 88999999999999999999999998876 66666767776665
Q ss_pred H-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhh
Q 017754 223 A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWK 301 (366)
Q Consensus 223 ~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~ 301 (366)
+ ..+...+++++++.|++.+..++.....+.+.++ ++|+.+.++...+..+|..+ ++++.+.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~--------- 154 (377)
T TIGR00890 86 AIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFI-LSPLITSVINLEG--------- 154 (377)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhH-HHHHHHHHHhccc---------
Confidence 5 3455667788888999988877777777888886 67999999999999999986 6667777766554
Q ss_pred ccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 302 YNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 302 ~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|++.|++.++++++.++..+.+.
T Consensus 155 -----------------------~~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 155 -----------------------VPAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHHHHhe
Confidence 99999999988877766655544
No 31
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.50 E-value=1.3e-12 Score=127.73 Aligned_cols=168 Identities=13% Similarity=0.121 Sum_probs=132.0
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHH
Q 017754 143 FSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALL 220 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~ 220 (366)
+..+........+...+|++.+++|.+.... ..+.+.++..++.++.|+++||+|||+.. ..+.++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l------~~~~~~~~i~~~ 83 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA------IPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH------HHHHHHHHHHHH
Confidence 3334444444456678999999999988765 77788888899999999999999987654 556666666666
Q ss_pred HHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhh
Q 017754 221 YYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLL 299 (366)
Q Consensus 221 l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~ 299 (366)
++.. .+...+++..++.|++.+..++...+++.|.++.++|+...++.+....+|..+ +|.+++.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~-~~~i~~~l~~~~g------- 155 (392)
T PRK10473 84 LCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVL-APVLGHLIMLKFP------- 155 (392)
T ss_pred HHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcC-------
Confidence 6553 344567778888999988888888999999999999999999999999999885 8999988877665
Q ss_pred hhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 300 WKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.+++++++.++.+...++
T Consensus 156 -------------------------~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 156 -------------------------WQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred -------------------------hHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999888877776665555443
No 32
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.50 E-value=7.2e-13 Score=133.51 Aligned_cols=167 Identities=17% Similarity=0.239 Sum_probs=135.9
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHHH---hCCChhHH--HHHHHHHHHhhhhhhhhhhhhh-hhhhccCchhHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQS---LGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPRPVAMAV 210 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~---~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~-~grr~~~~R~~~~~~ 210 (366)
.+|.+++..++-..+.+....++|.+.++ +|++..++ .++.+.+...++++++|+++|| +|||+.. .+
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l------~~ 84 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM------VL 84 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH------HH
Confidence 36677777777667777778889988765 78887665 8888899999999999999999 7998766 77
Q ss_pred HHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCc---hhhHHHHHHhhhhhhHHhhhhHHHHH
Q 017754 211 AQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS---FGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 211 ~~~~~~~~~~l~~~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~---~g~~~g~~~~~~~~G~~i~gp~l~G~ 286 (366)
+.++.++++++++.. +...++++.++.|+|.|...+...+++++.++.++ ++.++++.+.+.++|+.+ ||.++|+
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~i-g~~l~g~ 163 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFI-SPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHH-HHHHHHH
Confidence 777788887777643 34566677888899988888888999999998764 888999999999999996 9999999
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 017754 287 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 342 (366)
Q Consensus 287 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~ 342 (366)
+.+..+ |++.|++.++.++++.+.
T Consensus 164 l~~~~g--------------------------------~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 164 IAENYG--------------------------------YHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHhcC--------------------------------hHHHHHHHHHHHHHHHHH
Confidence 998776 999999887665555443
No 33
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.50 E-value=7.7e-13 Score=129.02 Aligned_cols=159 Identities=10% Similarity=0.013 Sum_probs=123.0
Q ss_pred hHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hhh
Q 017754 151 SGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWP 227 (366)
Q Consensus 151 ~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~ 227 (366)
....+...+|++.+++|.+..+. ..+.+.++..++.+..|+++||+|||+.. .........+.+.... .+.
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~------~~~~~~~~~~~~~~~~~~~~ 79 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL------FGSLATFAAAAGRLLDPFNY 79 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH------HHHHHHHHHHHHHHHHhccH
Confidence 34456678999999999998776 78888899999999999999999987543 3333333333222222 455
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCC
Q 017754 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 307 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~ 307 (366)
..+++++++.|++.+. .......++|.+++++|+++.++...+.++|..+ ++.+++++.+..+
T Consensus 80 ~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l-~~~~~~~l~~~~g--------------- 142 (368)
T TIGR00903 80 EWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIF-ALAAGLKIYTAGG--------------- 142 (368)
T ss_pred HHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccc---------------
Confidence 6788999999999886 4445556699999999999999999999999996 9999999987665
Q ss_pred CcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 308 PVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 308 ~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
||+.|++.++++++..++.....++
T Consensus 143 -----------------Wr~~f~~~~~l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 143 -----------------LQLLIIPIAAVAAAGIILVLAALPA 167 (368)
T ss_pred -----------------hHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999888887776666555443
No 34
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.49 E-value=1e-12 Score=130.22 Aligned_cols=189 Identities=12% Similarity=0.117 Sum_probs=138.7
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCCh--------h--HHHHHHHHHHHhhhhhhhhhhhhhhhh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYAD--------T--SIYVSMISIWNFLGRVGGGYFSEAIVR 198 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~--------~--~~~vsl~~i~~~~g~~~~G~lsD~~gr 198 (366)
.++.+|++.+|.+++..++..........+++.+.++.|++. . ....++..+...++.+..|+++||+++
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~ 280 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGI 280 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 345778888887777766654444444455677777777543 1 227778888889999999999999998
Q ss_pred hccCchhHHHHHHHHHHHHHHHHHHhh--hh---HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHH-hhh
Q 017754 199 KFAYPRPVAMAVAQVVMAFALLYYAIG--WP---GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLT-LAS 272 (366)
Q Consensus 199 r~~~~R~~~~~~~~~~~~~~~~l~~~~--~~---~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~-~~~ 272 (366)
|+.+ ..+.++.+++..++... +. ..+++..++.|++.+...+.....++|.+|.+.+|+++|+.+ ...
T Consensus 281 r~~l------~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~ 354 (418)
T TIGR00889 281 KKVM------LLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCN 354 (418)
T ss_pred HHHH------HHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 7755 66666666665554431 11 345566778888888777777888999999999999999997 567
Q ss_pred hhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhc
Q 017754 273 PAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 350 (366)
Q Consensus 273 ~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 350 (366)
.+|+.+ ||.++|+++|..+... ..+|+.+|++.++++++++++.+++.+++
T Consensus 355 ~lg~~i-Gp~l~G~l~~~~g~~~--------------------------~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 355 GFGSLL-GYILSGVMVEKMFAYG--------------------------TFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred hhHHHH-HHHHHHHHHHHhcccc--------------------------CCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 899996 9999999999875211 01299999999888888877777776544
No 35
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.49 E-value=2.9e-12 Score=125.44 Aligned_cols=156 Identities=12% Similarity=0.135 Sum_probs=119.4
Q ss_pred HHHhcHHHHHHHhCCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHH
Q 017754 154 TVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYV 232 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~s~~~~~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~ 232 (366)
....+++.+.++.|++......+.+.++..++++..|+++||+++|+.. ..+..+++++.+++. ..+...+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (399)
T PRK05122 234 TIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVA------IVSLLVEILGLLLLWLAPSPWMALI 307 (399)
T ss_pred HHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHHHHHHHHHHHhccHHHHHH
Confidence 4445667777777775544466778888899999999999999876543 455555555555544 334445566
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccC
Q 017754 233 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFR 312 (366)
Q Consensus 233 ~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~ 312 (366)
..++.|++.+..++.....+.|.++++++|+.+++.+....+|..+ +|.+.|++.|..+
T Consensus 308 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~~g-------------------- 366 (399)
T PRK05122 308 GAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGI-TGPLAGLVASWFG-------------------- 366 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC--------------------
Confidence 7778899988878777777889999999999999999999999986 8999999998876
Q ss_pred CCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 313 DQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 313 ~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|+..|++.+++++++.++.+.+.+
T Consensus 367 ------------~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 367 ------------YPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999988888877766655433
No 36
>PRK03699 putative transporter; Provisional
Probab=99.49 E-value=2e-12 Score=126.79 Aligned_cols=170 Identities=12% Similarity=0.098 Sum_probs=133.1
Q ss_pred hhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017754 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
+.+|..++.+++.......+...+|++.+++|++..+. ..+...++..++.+++|+++||+|||+.. ..+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~------~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL------IFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH------HHHHH
Confidence 34666666666666666667778999999999988765 77888899999999999999999998755 55555
Q ss_pred HHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 214 VMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 214 ~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+.+++.++... .+...+++.+++.|++.|...+...+.+.|.++.++|+...++.+....+|+.+ +|.+.+++.+...
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~ 159 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMI-FPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccc
Confidence 66666555553 445567788889999988888888889999999999999999988888899886 8999888876432
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 017754 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 343 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~ 343 (366)
.||+.|.+.++++++..++.
T Consensus 160 -------------------------------gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 160 -------------------------------EWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred -------------------------------cHHHHHHHHHHHHHHHHHHH
Confidence 29999998887666654443
No 37
>PRK03699 putative transporter; Provisional
Probab=99.49 E-value=3e-12 Score=125.54 Aligned_cols=178 Identities=16% Similarity=0.159 Sum_probs=130.9
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHH
Q 017754 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
++.+|++.+..++.......+..++|.+.+ .+|++..+. ..+++.++..+|+++.|+++||+++|+.. ...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l------~~~ 277 (394)
T PRK03699 204 GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRIL------TVL 277 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHH------HHH
Confidence 456777777777766666677889999985 579887655 77888899999999999999999887544 333
Q ss_pred HHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 212 QVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 212 ~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
..+.++..+++. ..+...+.+..++.|++.++.++...+...+..+ ++++...+.......+|+.+ +|.+.|+++|.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i-~p~~~G~l~~~ 355 (394)
T PRK03699 278 AGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTML-TFVVTSPIVAH 355 (394)
T ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHH-HHHHHHHHHHH
Confidence 333333333333 3334445556677888888878877777777664 55678888888888999996 99999999998
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchH
Q 017754 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
.+ ++..|++.+++++++.++.+.+.+-.|+
T Consensus 356 ~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (394)
T PRK03699 356 FG--------------------------------LQAALLTANGLYAVVFVMCILLGFVSKH 385 (394)
T ss_pred hC--------------------------------chhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 76 8889998888888877666555443333
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.49 E-value=2.1e-12 Score=126.88 Aligned_cols=159 Identities=9% Similarity=0.029 Sum_probs=125.1
Q ss_pred hHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhh
Q 017754 151 SGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWP 227 (366)
Q Consensus 151 ~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~ 227 (366)
....+...+|++.+++|.+.... ..+.+.++..++.++.|+++||+|||+.+ ..+.++.+++.++.. ..+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~ 101 (406)
T PRK15402 28 ANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM------LAGVAFFILTCLAILLAQSI 101 (406)
T ss_pred hhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHHHHHHHHHHHHHHHHccH
Confidence 34455667888999999987665 77888899999999999999999997655 555555565555544 3445
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCC
Q 017754 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 307 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~ 307 (366)
..+++.+++.|++.+...+...+.+.|.++.++++...++......+|..+ +|.+++.+.+..+
T Consensus 102 ~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~~~--------------- 165 (406)
T PRK15402 102 EQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLL-GPLVGAALIHVLP--------------- 165 (406)
T ss_pred HHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccC---------------
Confidence 567788889999988877888889999999999998889888888888885 9999999988665
Q ss_pred CcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 308 PVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 308 ~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|++.|++.+++++++.+......+
T Consensus 166 -----------------w~~~~~~~~~~~~~~~~~~~~~~~ 189 (406)
T PRK15402 166 -----------------WRGMFVLFAALAALSFFGLWRAMP 189 (406)
T ss_pred -----------------ccHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999988887776665544433
No 39
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.49 E-value=3e-12 Score=126.36 Aligned_cols=148 Identities=14% Similarity=0.104 Sum_probs=119.1
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+...++.+++...........+|.+.+++|.+..+. ..++..++..++.++.|+++||+|||+.. ..+.++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l------~~~~~~~ 93 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM------MWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHHHHHH
Confidence 444455555544445556667788889999987665 77888899999999999999999998765 6677777
Q ss_pred HHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+++.++.. ..+...+++++++.|++.|..++....+++|.+++++|+.+.++...+..+|..+ +|.+.+.+.+..+
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~-~~~l~~~l~~~~~ 170 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNII-AAYFMPSFAEAYG 170 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHH-HHHHHHHHcccCC
Confidence 77666655 3455678889999999999989988999999999999999999999999999996 8888888877665
No 40
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.48 E-value=2.4e-12 Score=125.95 Aligned_cols=172 Identities=9% Similarity=0.105 Sum_probs=131.9
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
.++.....++.......+...+|++.+++|.+..+. ..+...++..++.+++|+++||+|||+.+ ..+.++.
T Consensus 10 l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~------~~~~~~~ 83 (394)
T PRK11652 10 LFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI------LVGMSIF 83 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH------HHHHHHH
Confidence 344444455555555566677899999999988765 78888999999999999999999997755 5555555
Q ss_pred HHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhh
Q 017754 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 294 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~ 294 (366)
+++.++.. ..+...+++.+++.|++.+...+.......|.++.++++.+.++.+++..++..+ +|.++|.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~~g-- 160 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLL-APLIGGLLTTLFG-- 160 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccC--
Confidence 65555544 3445567788889999888777777778899999899999999999999999985 9999999988765
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 295 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|++.|++.++++++..++..+..+
T Consensus 161 ------------------------------~~~~f~~~~~~~~~~~~~~~~~~~ 184 (394)
T PRK11652 161 ------------------------------WRACYLFLLLLGAGVTFSMARWMP 184 (394)
T ss_pred ------------------------------hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999888766655544444433
No 41
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.48 E-value=3.7e-12 Score=123.97 Aligned_cols=148 Identities=13% Similarity=0.193 Sum_probs=120.1
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+...++.+++............|++.+++|++..+. ..++..++..++.++.|+++||+|||+.+ ..+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~------~~~~~~~ 87 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM------VTSIVLF 87 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHH
Confidence 344555666666666667777888999999987765 78888999999999999999999998755 5566666
Q ss_pred HHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 216 AFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 216 ~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+++.++.. ..+...+++.+++.|++.+..++...+++.|.++.++++.+.++.++...+|..+ +|.+.+.+.+..+
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~l~~~l~~~~~ 164 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVV-AAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhcC
Confidence 66665554 3455677888999999999988989999999999999999999999999999996 9999998877653
No 42
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.48 E-value=2.4e-12 Score=122.12 Aligned_cols=169 Identities=22% Similarity=0.287 Sum_probs=137.1
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017754 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
|.+.+..++...........+|.+.+++|.+..+. ..+...++..++.++.|+++||++||+.. ..+.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~------~~~~~~~~ 75 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVL------LLGLLLFA 75 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhh------HHHHHHHH
Confidence 34445555555555666777888999999887665 78888899999999999999999998755 66667777
Q ss_pred HHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhh
Q 017754 217 FALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQ 295 (366)
Q Consensus 217 ~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~ 295 (366)
++.++... .+...+++..++.|++.+..++...++++|++++++|++..++......+|..+ +|.+++.+.+..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~--- 151 (352)
T cd06174 76 LGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALL-GPLLGGLLAESLG--- 151 (352)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHH-HHHHHHHHHHHhh---
Confidence 76666553 455677888899999999989999999999999999999999999999999996 9999999998876
Q ss_pred hhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 296 AGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|++.|++.+++.+++.+....+
T Consensus 152 -----------------------------~~~~~~~~~~~~~~~~~~~~~~ 173 (352)
T cd06174 152 -----------------------------WRWLFLILAILGLLLALLLLFL 173 (352)
T ss_pred -----------------------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988887777766555443
No 43
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.48 E-value=1.4e-12 Score=129.90 Aligned_cols=184 Identities=13% Similarity=0.099 Sum_probs=129.6
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+..+.+|+++.|++.+.+++..+...++..++|++.++ .++.... ...+..+...++|+++|+++||+|+++..
T Consensus 244 ~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl--- 319 (462)
T PRK15034 244 DQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVT--- 319 (462)
T ss_pred HHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHH---
Confidence 35678899999999999999988888888899999876 4444333 45556788899999999999999987655
Q ss_pred HHHHHHHHHHHHHHHH--HHhh-----hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCC--------------------
Q 017754 206 VAMAVAQVVMAFALLY--YAIG-----WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-------------------- 258 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l--~~~~-----~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-------------------- 258 (366)
.++.+++.++... +..+ +.....+..+...++.|......+-+++++|+.
T Consensus 320 ---~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~ 396 (462)
T PRK15034 320 ---LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREA 396 (462)
T ss_pred ---HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHH
Confidence 3333333332211 1111 111122222222233444444455566666653
Q ss_pred -CchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHH
Q 017754 259 -KSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCI 337 (366)
Q Consensus 259 -~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~ 337 (366)
++.|...|+....+.+|+++ -|++.|..++.++ +|...|++..+..+
T Consensus 397 ~~~~g~v~G~v~a~G~~Ggf~-~p~~~g~~~~~~g-------------------------------~~~~~~~~~~~~~~ 444 (462)
T PRK15034 397 VTETAAALGFISAIGAVGGFF-IPQAFGMSLNMTG-------------------------------SPVGAMKVFLIFYI 444 (462)
T ss_pred HHHHHHHHHHHHHHHHcccch-hhHHHHHHHHHcC-------------------------------CcHHHHHHHHHHHH
Confidence 26789999999999999996 6999999999887 48999999999999
Q ss_pred HHHHHHHHHhhhc
Q 017754 338 IAMVMSLIVVHRT 350 (366)
Q Consensus 338 ~~~~~~~~~~~~~ 350 (366)
++.++.++.+.|+
T Consensus 445 ~~~~~~w~~y~r~ 457 (462)
T PRK15034 445 VCVLLTWLVYGRR 457 (462)
T ss_pred HHHHHHHHHhccC
Confidence 9998888876554
No 44
>TIGR00895 2A0115 benzoate transport.
Probab=99.48 E-value=1e-12 Score=127.24 Aligned_cols=166 Identities=14% Similarity=0.111 Sum_probs=128.5
Q ss_pred HHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHH
Q 017754 144 SLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY 221 (366)
Q Consensus 144 ~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l 221 (366)
.+++...........+|.+.+++|++.... ..++..++..++.++.|+++||++||+.. ..+.++.+++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~------~~~~~~~~~~~~~ 98 (398)
T TIGR00895 25 IMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVL------LWSILLFSVFTLL 98 (398)
T ss_pred HHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHH------HHHHHHHHHHHHH
Confidence 333333334455567888889999987665 67788888999999999999999987655 5555555555555
Q ss_pred HH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhh
Q 017754 222 YA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLW 300 (366)
Q Consensus 222 ~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~ 300 (366)
.. ..+...+++..++.|++.+..++...++++|.++.++++.+.++......+|..+ +|.++|++.+..+
T Consensus 99 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~g-------- 169 (398)
T TIGR00895 99 CALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAV-GGFLAGWLIPVFG-------- 169 (398)
T ss_pred HHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHH-HHHHHHHHhhccc--------
Confidence 44 3445567778889999999989999999999999999999999999999999996 9999999988766
Q ss_pred hccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 301 KYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|+..|++.++++++..++.+.+.+
T Consensus 170 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 193 (398)
T TIGR00895 170 ------------------------WRSLFYVGGIAPLLLLLLLMRFLP 193 (398)
T ss_pred ------------------------ceeehhhhhhHHHHHHHHHHHhCC
Confidence 888888887666665555544443
No 45
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.47 E-value=5.4e-12 Score=123.52 Aligned_cols=172 Identities=15% Similarity=0.160 Sum_probs=130.8
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhH-------HHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTS-------IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 209 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~-------~~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~ 209 (366)
.+..++++.++.......+...+|.+.+++|.+..+ ...++..+...++.+++|+++||++||+.. .
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~ 88 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML------L 88 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH------H
Confidence 455666666666655556677899999999887432 256777888899999999999999987654 4
Q ss_pred HHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHH
Q 017754 210 VAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 210 ~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~ 288 (366)
.+.++.+++.+++. ..+...+++.+++.|++.+ ..+.....+.+.++.++++.+.++.+....+|..+ +|.++|.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~ 166 (408)
T PRK09874 89 RSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALL-GPLAGGLLA 166 (408)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 55555556655544 3445567778888888754 45666678889999999999999999999999996 999999998
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 289 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
+..+ |+++|++.+++.+++.+..+++.+
T Consensus 167 ~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 167 DSYG--------------------------------LRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred HHhC--------------------------------HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8776 999999988877776665555443
No 46
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.47 E-value=1.9e-12 Score=125.56 Aligned_cols=158 Identities=18% Similarity=0.241 Sum_probs=129.6
Q ss_pred HHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHH
Q 017754 153 LTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGE 229 (366)
Q Consensus 153 ~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~ 229 (366)
..+...+|.+.+++|.+..+. ..+...++..++++.+|+++||+|||+.. ..+.++.+++.+++. ..+...
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~------~~~~~~~~i~~~~~~~~~~~~~ 81 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVI------LGGTLVFALAAVACALAQTIDQ 81 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHH------HHHHHHHHHHHHHHHHHccHHH
Confidence 345678899999999987765 77888899999999999999999987655 666666666666655 344556
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCc
Q 017754 230 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 309 (366)
Q Consensus 230 l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~ 309 (366)
+++..++.|++.+...+...++++|.++.+++++..++.+....+|..+ +|.+++.+.+..+
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~----------------- 143 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLL-APIIGGWLLVWFS----------------- 143 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC-----------------
Confidence 7788889999999888888899999999999999999999999999996 9999999988776
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 310 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 310 ~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.++++++..++.....++
T Consensus 144 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 144 ---------------WHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999888877776665544433
No 47
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.47 E-value=2.2e-12 Score=129.71 Aligned_cols=149 Identities=15% Similarity=0.217 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMAVAQ 212 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~~~~ 212 (366)
.+|.++...++.....+++..++|.+.. .+|++..++ ..+.+.+...++.+++|+++||+ |||+.. .++.
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i------liG~ 83 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV------MLGA 83 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH------HHHH
Confidence 4666666666666677777788888875 479987765 77777788889999999999999 998765 6777
Q ss_pred HHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCC--chhhHHHHHHhhhhhhHHhhhhHHHHHHH
Q 017754 213 VVMAFALLYYAIG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK--SFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 213 ~~~~~~~~l~~~~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~--~~g~~~g~~~~~~~~G~~i~gp~l~G~l~ 288 (366)
++++++++++... .+..++++..+.++|.|...+...++++|.|+++ .|.+++++.++..++|+.+ +|.+.|++.
T Consensus 84 il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~i-ap~l~g~L~ 162 (493)
T PRK15462 84 LLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSII-APIACGYAQ 162 (493)
T ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHH-HHHHHHHHH
Confidence 7777777666532 2233455555566677766677788999999876 6999999999999999996 999999998
Q ss_pred hhhh
Q 017754 289 DYYA 292 (366)
Q Consensus 289 d~~~ 292 (366)
+..+
T Consensus 163 ~~~G 166 (493)
T PRK15462 163 EEYS 166 (493)
T ss_pred hhhC
Confidence 8776
No 48
>PRK12382 putative transporter; Provisional
Probab=99.47 E-value=7e-12 Score=122.58 Aligned_cols=154 Identities=12% Similarity=0.049 Sum_probs=119.9
Q ss_pred HHHhcHHHHHHHhCCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHH
Q 017754 154 TVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYV 232 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~s~~~~~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~ 232 (366)
....+.+.+.++.|++......+...++..++++..|+++||+++|+.. ..+..+++++++++. ..+....++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (392)
T PRK12382 234 VIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA------IVSLLVETVGLLLLWLAPTAWVALA 307 (392)
T ss_pred HHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh------HHHHHHHHHHHHHHHHcccHHHHHH
Confidence 3445667777777776554456667778889999999999999987665 455555555555544 233445566
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccC
Q 017754 233 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFR 312 (366)
Q Consensus 233 ~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~ 312 (366)
+.++.|++.+..++...+.+.+.++++++|+.+|+.+....+|..+ +|.+.|++.|..+
T Consensus 308 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-g~~~~g~l~~~~g-------------------- 366 (392)
T PRK12382 308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGV-SGPLAGMLATSFG-------------------- 366 (392)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhC--------------------
Confidence 7778888888877777888899999999999999999999999996 9999999999887
Q ss_pred CCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 313 DQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 313 ~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|+..|++.+++.+++.++.+..
T Consensus 367 ------------~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 367 ------------YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred ------------chHHHHHHHHHHHHHHHHHHhh
Confidence 9999999888777776665443
No 49
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.47 E-value=4.2e-12 Score=128.75 Aligned_cols=172 Identities=15% Similarity=0.187 Sum_probs=129.6
Q ss_pred Hhhhh-hHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhh-hhhhccCchhH
Q 017754 132 ALMKA-DFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPRPV 206 (366)
Q Consensus 132 ~l~~~-~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~-~grr~~~~R~~ 206 (366)
.++++ .+|.+++..++.....+.+..+++.+. +++|++..+. ..+.+........+++|+++|| +|||+.+
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~---- 91 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI---- 91 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH----
Confidence 34555 488888888888777777778888877 6689987665 4444444555556789999999 5998765
Q ss_pred HHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCc--hhhHHHHHHhhhhhhHHhhhhH
Q 017754 207 AMAVAQVVMAFALLYYAIG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS--FGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~--~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+.++++++++++... ....++++.+++|+|.|...+...++++|.|+.+. ++.++++.+++.++|+.+ ||.
T Consensus 92 --~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~-gp~ 168 (500)
T PRK09584 92 --MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF-SML 168 (500)
T ss_pred --HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH-HHH
Confidence 66777777777666543 23345667788899988878888889999998653 556889999999999996 999
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHH
Q 017754 283 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVM 342 (366)
Q Consensus 283 l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~ 342 (366)
+.|++.|..+ |++.|++.++..+++.+.
T Consensus 169 i~g~l~~~~g--------------------------------~~~~F~i~~i~~~i~~i~ 196 (500)
T PRK09584 169 ATPWLAAKYG--------------------------------WSVAFALSVVGMLITVVN 196 (500)
T ss_pred HHHHHHHhhC--------------------------------HHHHHHHHHHHHHHHHHH
Confidence 9999998876 999999877655555443
No 50
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.46 E-value=2.5e-12 Score=135.03 Aligned_cols=137 Identities=12% Similarity=0.125 Sum_probs=106.1
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 017754 175 VSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAAS 253 (366)
Q Consensus 175 vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~s 253 (366)
..+.+++.++|.+++|+++||+|||+.+ .++.++.+++.+++.. .+...+++..++.|++.++.++...++++
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l------~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~a 674 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRML------AGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTV 674 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHH------HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456688889999999999999998765 6666666666665553 23344555666778887888899999999
Q ss_pred HhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHH
Q 017754 254 ELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMA 333 (366)
Q Consensus 254 e~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~ 333 (366)
|+||++.|++++|+.++...+|+++ ||.++|.+.+.. ....|++.+
T Consensus 675 El~Pt~~Rgta~Gi~~~~~rlGaii-gp~i~g~L~~~~---------------------------------~~~pf~i~a 720 (742)
T TIGR01299 675 ELYPSDKRATAFGFLNALCKAAAVL-GILIFGSFVGIT---------------------------------KAAPILFAS 720 (742)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhh---------------------------------hHHHHHHHH
Confidence 9999999999999999999999996 999999887642 456777777
Q ss_pred HHHHHHHHHHHHHhhhchH
Q 017754 334 GLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~ 352 (366)
++.++++++.+++ +++|+
T Consensus 721 ~~lll~~ll~~~L-PET~~ 738 (742)
T TIGR01299 721 AALACGGLLALKL-PDTRG 738 (742)
T ss_pred HHHHHHHHHHHhC-CCCcc
Confidence 7777766665544 56654
No 51
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.46 E-value=6.7e-12 Score=122.49 Aligned_cols=173 Identities=14% Similarity=0.144 Sum_probs=124.5
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+.++.++++.+|......+...........++|.+.++.|++.... ..++..++..++++..|+++||+++|+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l--- 268 (381)
T PRK03633 192 SIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVL--- 268 (381)
T ss_pred CHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHH---
Confidence 4667788888886554433333333344567888888888886654 77788889999999999999999987544
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHH
Q 017754 206 VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G 285 (366)
..+..+++++.+.+. . ....+...++.|++.+...+...+.+.|..++++++...+..++...+|..+ ||.++|
T Consensus 269 ---~~~~~~~~~~~~~~~-~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~i-gp~~~G 342 (381)
T PRK03633 269 ---RVQVFVVILGSIAML-S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLL-GPSFTA 342 (381)
T ss_pred ---HHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 444444444443332 1 2223345566677666667777777889888888888888888889999996 999999
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHH
Q 017754 286 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMV 341 (366)
Q Consensus 286 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~ 341 (366)
++.|..+ |++.|.+.+++.+++.+
T Consensus 343 ~l~~~~g--------------------------------~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 343 MLMQNYS--------------------------------DNLLFIMIASVSFIYLL 366 (381)
T ss_pred HHHHHhC--------------------------------ccHHHHHHHHHHHHHHH
Confidence 9999887 88899887776655443
No 52
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.46 E-value=3.4e-12 Score=127.81 Aligned_cols=191 Identities=14% Similarity=0.085 Sum_probs=131.3
Q ss_pred CCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017754 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
.++++.++++.+|.+.+..++.......+..++|.+.++ +|++.... ..+++.++..++.++.|+++||+++|+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~ 331 (465)
T TIGR00894 252 LPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLS 331 (465)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 358889999999999988888888778888899998755 78877655 677888999999999999999998776554
Q ss_pred hhHH----HHHHHHHHHHHHHHHHh-h-hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHH
Q 017754 204 RPVA----MAVAQVVMAFALLYYAI-G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 204 R~~~----~~~~~~~~~~~~~l~~~-~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
|... ..++.++.++..+.... . +....+++..+.+.+.+...+.......|.. ++..|...++.++...+|+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~l~~~ 410 (465)
T TIGR00894 332 LTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLA-PRFLGFIKGITGLPGFIGGL 410 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcC-hhHHHHHHHHHHHHHHHHHH
Confidence 4322 12222111211111111 1 2222233334444444444444444555655 45899999999999999999
Q ss_pred hhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 278 i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
+ +|.+.|++.|.... + .|..+|++.+++++++.++...+..
T Consensus 411 i-~p~l~g~~~~~~~~--~---------------------------~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 411 I-ASTLAGNILSQDSK--N---------------------------VWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred H-HHHhhheeeCCCCc--h---------------------------HHHHHHHHHHHHHHHHHHHeeeeec
Confidence 6 89999998875421 0 2999999999888888776655443
No 53
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.46 E-value=3.3e-12 Score=127.17 Aligned_cols=176 Identities=14% Similarity=0.134 Sum_probs=127.9
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHH
Q 017754 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 212 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~ 212 (366)
+..+|.+.+.+.+.......+...+|.+. +.|++..+. ..+...++..++.+..|+++||++||+.. ..+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~------~~~~ 98 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL------PAGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh------HHHH
Confidence 34445555544444444344455667655 468887765 77888899999999999999999998765 5555
Q ss_pred HHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHH
Q 017754 213 VVMAFALLYYAI-----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 213 ~~~~~~~~l~~~-----~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l 287 (366)
++.+++.++... .+...+++..++.|++.|..++.....+.|.+++++||++.++.+.+..+|+.+ +|.+.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~-~~~l~~~~ 177 (438)
T TIGR00712 99 ILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGI-PPLLVLLG 177 (438)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHH-HHHHHHHH
Confidence 666665555432 123345667778899888888888888999999999999999999999999996 78877765
Q ss_pred HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 288 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
.+... .|+.+|++.++++++..++.+++.++
T Consensus 178 ~~~~~-------------------------------~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 178 MAWFN-------------------------------DWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHHhh-------------------------------hhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 55432 29999999998888776666555443
No 54
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.46 E-value=3.8e-12 Score=125.08 Aligned_cols=147 Identities=14% Similarity=0.101 Sum_probs=117.0
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHH
Q 017754 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 212 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~ 212 (366)
+++||.++++.++.......+...++.+.++++.+.... ..+.+.+...++.+++|+++||++||+.+ ..+.
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl------~~~~ 75 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVM------FIAN 75 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhh------HHHH
Confidence 356888888887776655555566677788888876554 77788889999999999999999999877 5555
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 213 VVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 213 ~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
++.+++.+++..... .++.+++.|++.+...+...++++|++|+++++++.++..+...+|..+ ||.++|.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~--~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~-Gp~lgG~l~~~ 150 (393)
T PRK11195 76 GIKLLGCLLMLFGIH--PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILL-GTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 555555444332211 2667788999999999999999999999999999999999999999996 99999999884
No 55
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.45 E-value=3.1e-12 Score=127.32 Aligned_cols=186 Identities=16% Similarity=0.152 Sum_probs=126.3
Q ss_pred HHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017754 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
..++++.+|.+.+..++.....+.+..++|.+.++ .|++...+ ..+++.+.+.++++++|+++||+++++.. ..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~---~~ 322 (438)
T TIGR00712 246 YVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG---AT 322 (438)
T ss_pred HHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc---HH
Confidence 36688889988777666666666777899999876 58877654 66778888999999999999999765432 11
Q ss_pred HHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 208 MAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
.........++.+.+.. .+....++..++.|++..+........+.|.+|++.+|++.|+.+....+|+.+++|.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~ 402 (438)
T TIGR00712 323 GVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV 402 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhH
Confidence 11111111122222211 122323333444555433333333346789999999999999999888887643499999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhch
Q 017754 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r 351 (366)
|.+.|..+ |..+|++++++++++.+..+++.++.|
T Consensus 403 G~l~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 403 GYTVDFFG--------------------------------WDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHhcc--------------------------------chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999876 999999988888888877777665543
No 56
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.45 E-value=6.1e-12 Score=123.90 Aligned_cols=169 Identities=17% Similarity=0.224 Sum_probs=129.7
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHH-HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 139 LLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i-~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+++++..++.......+...++.+ .+++|++.... ..+...+...+.++++|+++||++||+.. ..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l------~~~~~~~ 86 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMI------VTGMLMR 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHH------HHHHHHH
Confidence 444455555555555555566654 46789987766 67777888888899999999999987765 6666666
Q ss_pred HHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhh
Q 017754 216 AFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 294 (366)
Q Consensus 216 ~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~ 294 (366)
+++.+++.. .+.+.+++..++.|++.+...+...+++.+.+++++++.++++......+|..+ ||.++|++. ..+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~i-g~~l~g~l~-~~g-- 162 (400)
T PRK11646 87 AAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVI-GALLGSWLL-QYD-- 162 (400)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-Hhh--
Confidence 666666553 445567788888899888777778889999999999999999999999999996 999999998 445
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 295 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|++.|++.++++++++++..+..
T Consensus 163 ------------------------------~~~~f~~~~~~~~~~~i~~~~~~ 185 (400)
T PRK11646 163 ------------------------------FRLVCATGAVLFVLAAAFNAWLL 185 (400)
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999988877776655544433
No 57
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.45 E-value=3.4e-12 Score=127.88 Aligned_cols=153 Identities=10% Similarity=0.108 Sum_probs=118.3
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hhhHHH
Q 017754 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEI 230 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~~~l 230 (366)
.+...+|++.+++|.+..+. ..+++.++..++.+++|+++||++||+.+ ..+.++.+++.++++. .+...+
T Consensus 37 ~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~l 110 (455)
T TIGR00892 37 AVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV------IAGGLLASLGMILASFSSNVIEL 110 (455)
T ss_pred chhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH------HhhHHHHHHHHHHHHHhhhHHHH
Confidence 34556888999999987665 67777778888999999999999998655 5566666666666543 334444
Q ss_pred HHH-HHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCc
Q 017754 231 YVT-TVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 309 (366)
Q Consensus 231 ~~~-~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~ 309 (366)
++. +++.|++.+..++...+++.+.|+ ++|+.+.++.+.+..+|..+ +|++.|++.+..+
T Consensus 111 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~-~~~l~~~l~~~~g----------------- 171 (455)
T TIGR00892 111 YLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLST-LAPLNQYLFESFG----------------- 171 (455)
T ss_pred HHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHH-HHHHHHHHHHHhC-----------------
Confidence 443 467788887766666778889995 78999999999999999996 8999999998876
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 310 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 310 ~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|+++|++.+++++++.+..+++
T Consensus 172 ---------------wr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 172 ---------------WRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred ---------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998877666554443
No 58
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.45 E-value=1.1e-12 Score=129.83 Aligned_cols=177 Identities=13% Similarity=0.078 Sum_probs=122.6
Q ss_pred hhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017754 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
+.+|..++.++...........+.|.+.++.|++.... ...+..++.+++++++|+++||++||+.. ..+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~------~~~~~ 357 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL------LIGAA 357 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH------HHHHH
Confidence 33444444444433333445667888888899887544 66777888999999999999999987654 44455
Q ss_pred HHHHHHHHHH---h--hh------hHHHHHHHHHHHHHHhh-hhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 214 VMAFALLYYA---I--GW------PGEIYVTTVLVGLSYGA-HWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 214 ~~~~~~~l~~---~--~~------~~~l~~~~~l~G~~~g~-~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
+++++.+++. . .. .........+++.+++. ..+.....++|.+|++.++++.++.++...+|+.+ +|
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i-~~ 436 (481)
T TIGR00879 358 GMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFI-VG 436 (481)
T ss_pred HHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHH-HH
Confidence 5555544433 1 11 22222233333333332 23555667799999999999999999999999996 89
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhch
Q 017754 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 282 ~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r 351 (366)
.+.|.+.+..+ |++.|++.++++++++++.+++.++++
T Consensus 437 ~~~~~~~~~~~--------------------------------~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 437 FLFPTMLESIG--------------------------------VGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHhcC--------------------------------ccceehhHHHHHHHHHHHHheecccCC
Confidence 99999998876 888999999888888877766655544
No 59
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.45 E-value=6.4e-12 Score=126.57 Aligned_cols=149 Identities=12% Similarity=0.180 Sum_probs=121.3
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
.+..+++++++...........+|.+.+++|.+..+. ..+...++..++.++.|+++||+|||+.. ..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~ 94 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAM------VISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHHHHH
Confidence 4455566666655666666677889999999987765 78888899999999999999999997755 566666
Q ss_pred HHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 215 MAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 215 ~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
.+++.++... .+...+++..++.|++.+..++....++.|.++.++++...++...+..+|..+ +|.+.+.+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~ 172 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVV-AAQVYSLVVPVWG 172 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccCC
Confidence 6666666553 455677888899999999888888999999999999999999999999999996 9999999988665
No 60
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.45 E-value=4e-12 Score=122.50 Aligned_cols=146 Identities=14% Similarity=0.192 Sum_probs=115.7
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHH-HHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQ-ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~-i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
.+|..++++++.......+...+|+ +.+++|++.... ..+...++..++.+++|+++||+|||+.. .++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~ 75 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT------TLSLL 75 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHH
Confidence 4677888888877777888888996 778899998775 78888999999999999999999998765 66667
Q ss_pred HHHHHHHHHHh-h-hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 214 VMAFALLYYAI-G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 214 ~~~~~~~l~~~-~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
+++++.+++.. . +...+++.+++.|++.+ .+....++++|.+++++|+.+.++......+|..+ ++.+++.+...
T Consensus 76 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~i~~~l~~~ 152 (366)
T TIGR00886 76 LLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGV-AQFVMPPIIGS 152 (366)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHH-HHHHHHHHHHH
Confidence 77777666553 3 45567788888998855 45566778999999999999999988777777775 77776666553
No 61
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.45 E-value=2.1e-12 Score=130.15 Aligned_cols=184 Identities=14% Similarity=0.194 Sum_probs=123.4
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc-h
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP-R 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~-R 204 (366)
+++.++++++|++++.+++.......+.+++|.+.. ++|++...+ +.+++.+++.+|++++|+++||++||+..+ |
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r 324 (476)
T PLN00028 245 LRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGR 324 (476)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchh
Confidence 456778888998887777666666667778888865 469987655 788889999999999999999999876432 4
Q ss_pred hHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 205 PVAMAVAQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
.....+.+++.+++.+++... +.....+..++.+++.+...+..+++++++ +++++|+.+|+.+....+|+. +
T Consensus 325 ~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~-----i 398 (476)
T PLN00028 325 LWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFV-SRRSLGVISGLTGAGGNVGAV-----L 398 (476)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCccc-ChhhchhhhhhhhccccHHHH-----H
Confidence 444445555544444443322 223334444555665555455555556665 457899999998776555555 4
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
++++++.++. .+|+.+|++.+++.++++++.+++.
T Consensus 399 ~~~l~~~~~~-----------------------------~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 399 TQLLFFTGSS-----------------------------YSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHhcCC-----------------------------ccHhhHHHHHHHHHHHHHHHHHhee
Confidence 4455543220 0399999999988888877776654
No 62
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.45 E-value=1.1e-11 Score=125.24 Aligned_cols=158 Identities=11% Similarity=0.064 Sum_probs=104.4
Q ss_pred CHHHHhhh-hhHHHHH-HHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017754 128 TLPQALMK-ADFLLLF-FSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 128 ~~~~~l~~-~~~~ll~-~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
++++.+++ ++.+++. ...++.....+.+..++|.+.+ .+|++.... ..+...++..++.++.|+++||+|||+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~ 319 (490)
T PRK10642 240 SFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFV 319 (490)
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 46666653 2333322 2223334445567778999885 468876544 55666788889999999999999997644
Q ss_pred chhHHHHHHHHH-HHHHH--HHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHh
Q 017754 203 PRPVAMAVAQVV-MAFAL--LYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 278 (366)
Q Consensus 203 ~R~~~~~~~~~~-~~~~~--~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i 278 (366)
..+.++ ...+. +... ..+...++++.++.|++.+...+..+.+++|+||++.||++.|+.+....+++.+
T Consensus 320 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~ 393 (490)
T PRK10642 320 ------ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGL 393 (490)
T ss_pred ------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHH
Confidence 222221 21111 1112 2223455666777788777777778888999999999999999865555666664
Q ss_pred hhhHHHHHHHhhhh
Q 017754 279 FSGVIASGIYDYYA 292 (366)
Q Consensus 279 ~gp~l~G~l~d~~~ 292 (366)
+|.+.|++.+..+
T Consensus 394 -~p~i~g~l~~~~~ 406 (490)
T PRK10642 394 -TPTLAAWLVESTQ 406 (490)
T ss_pred -HHHHHHHHHHHhC
Confidence 8999999988654
No 63
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.45 E-value=3.3e-12 Score=129.17 Aligned_cols=149 Identities=18% Similarity=0.264 Sum_probs=119.4
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhh-hhhhccCchhHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPRPVAMAVAQ 212 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~-~grr~~~~R~~~~~~~~ 212 (366)
.+|++++..++...+.+.....++.+. +++|++..++ .++.+.....+..+++|+++|| +|||+.+ ..+.
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~------~~g~ 88 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI------VLGA 88 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH------HHHH
Confidence 477777777777777777766677665 5689887665 6677777788888899999999 9998877 7788
Q ss_pred HHHHHHHHHHHhh-h-hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCC--chhhHHHHHHhhhhhhHHhhhhHHHHHHH
Q 017754 213 VVMAFALLYYAIG-W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK--SFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 213 ~~~~~~~~l~~~~-~-~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~--~~g~~~g~~~~~~~~G~~i~gp~l~G~l~ 288 (366)
+++.+++++++.. + ...++++.++.|+|.|...+...++++|.||++ +++.++++.+++.++|+.+ ||.++|++.
T Consensus 89 ~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~-g~~l~g~l~ 167 (489)
T PRK10207 89 IVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLI-SLSLAPVIA 167 (489)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHH-HHHHHHHHH
Confidence 8888887776643 2 234557788889999998888899999999887 4578999999999999996 999999998
Q ss_pred hhhh
Q 017754 289 DYYA 292 (366)
Q Consensus 289 d~~~ 292 (366)
+..+
T Consensus 168 ~~~g 171 (489)
T PRK10207 168 DKFG 171 (489)
T ss_pred HhhC
Confidence 8776
No 64
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.45 E-value=1.1e-11 Score=122.01 Aligned_cols=178 Identities=14% Similarity=0.108 Sum_probs=129.4
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
++..++++.+|...+..++......+...++|.+.+++|++..+. ..++..+++.++++..|+++||++||+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~---- 290 (402)
T TIGR00897 215 ATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV---- 290 (402)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH----
Confidence 345778899998877777766666777888999999999987665 56778889999999999999999986543
Q ss_pred HHHHHHHHHHH---HHHHHHh---hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhh
Q 017754 207 AMAVAQVVMAF---ALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFS 280 (366)
Q Consensus 207 ~~~~~~~~~~~---~~~l~~~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~g 280 (366)
. ..+.+.+++ .+..... .+....++..++.|++.+...+. ...++|.. ++++|+++|+.+....+|+.+ +
T Consensus 291 ~-~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~-g 366 (402)
T TIGR00897 291 R-WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFL-A 366 (402)
T ss_pred H-HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHH-H
Confidence 1 112222222 1111111 12334456667778877765443 45566754 568999999999999999996 9
Q ss_pred hHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 281 GVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 281 p~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|.++|.++|..+ |...|++.+++.++++++.+++
T Consensus 367 p~i~g~l~~~~g--------------------------------~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 367 PAIAVLFIGFFG--------------------------------AIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHhhcc--------------------------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999887 8889999888887777666554
No 65
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.44 E-value=9.6e-12 Score=121.55 Aligned_cols=157 Identities=10% Similarity=-0.018 Sum_probs=124.7
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+.++.+|++++|.+.+..++.......+..+.|.+.++.|++...+ ..++..+...++.++.|++.||++.|+..
T Consensus 197 ~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l--- 273 (382)
T TIGR00902 197 AFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLL--- 273 (382)
T ss_pred hHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHH---
Confidence 4678889999999888877777777777788899999999987665 55556666777777778888888766544
Q ss_pred HHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHH-hhhhhhHHhhhhHH
Q 017754 206 VAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLT-LASPAGSLIFSGVI 283 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~-~~~~~G~~i~gp~l 283 (366)
.++.++..+..+++. ..+...++...++.|+++|..++....++.+. +.+++++..++.+ +...+|..+ ||.+
T Consensus 274 ---~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~-g~~~ 348 (382)
T TIGR00902 274 ---LISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAI-FTAF 348 (382)
T ss_pred ---HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 677777777776666 34455677778899999999888888888887 8888999999976 467788886 9999
Q ss_pred HHHHHhhhh
Q 017754 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
+|+++|+.+
T Consensus 349 ~G~l~~~~g 357 (382)
T TIGR00902 349 AGFIYPTLG 357 (382)
T ss_pred HHHHHHhcc
Confidence 999999886
No 66
>PRK09952 shikimate transporter; Provisional
Probab=99.44 E-value=1.3e-11 Score=122.99 Aligned_cols=178 Identities=11% Similarity=0.101 Sum_probs=119.4
Q ss_pred HhhhhhHHHHHH-HHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017754 132 ALMKADFLLLFF-SLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 132 ~l~~~~~~ll~~-~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
.+++++.|...+ ..++.....+....++|.+.+ .+|++.... ...+..+..+++.++.|+++||++||+..
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~----- 319 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVY----- 319 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-----
Confidence 556777776543 344444455566677887764 578876543 34455677788999999999999987644
Q ss_pred HHHHHHHHHHHHHHHH----hhhhH-HHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhh-hhhhHHhhhh
Q 017754 208 MAVAQVVMAFALLYYA----IGWPG-EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLA-SPAGSLIFSG 281 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~----~~~~~-~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~-~~~G~~i~gp 281 (366)
..+.++.+++.+.+. ..+.. .+++..++.+++.+...+..+++++|.||.+.|+++.++.+.. ..+|+.+ +|
T Consensus 320 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~-~p 397 (438)
T PRK09952 320 -ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGF-TP 397 (438)
T ss_pred -HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHH-HH
Confidence 233333333222211 11222 2334455567777777888899999999999999999986554 4478885 99
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 282 ~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.+.|++.|.++. .|...+.+.+++++++++..+.+
T Consensus 398 ~i~g~l~~~~~~------------------------------~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 398 FIAAALVTYFGG------------------------------SWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHhcCC------------------------------CchHHHHHHHHHHHHHHHHHHHc
Confidence 999999986640 28888888887777776666544
No 67
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.44 E-value=6.5e-13 Score=127.60 Aligned_cols=165 Identities=13% Similarity=0.176 Sum_probs=129.8
Q ss_pred HHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHH
Q 017754 145 LVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY 222 (366)
Q Consensus 145 ~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~ 222 (366)
+++.......+...+|.+.+++|++..+. ..+...++..++.++.|+++||+|||+.. ..+.++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL------PIGLILCAIVNLFF 77 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh------HHHHHHHHHHHHHH
Confidence 34444455556677888889999987765 78888999999999999999999998766 66666666666665
Q ss_pred H-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh-HHHHHHHhhhhhhhhhhhh
Q 017754 223 A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG-VIASGIYDYYAEKQAGLLW 300 (366)
Q Consensus 223 ~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp-~l~G~l~d~~~~~~~~~~~ 300 (366)
. ..+...+++..++.|++.+...+...++++|.++.++|+...++.+....+|..+ +| .+.+.+.+..+
T Consensus 78 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~-------- 148 (379)
T TIGR00881 78 GFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGL-LPPLVLFGIAELYS-------- 148 (379)
T ss_pred HHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHH-HHHHHHHHHHhcCC--------
Confidence 5 3455677788889999999888999999999999999999999999999999996 88 45555555444
Q ss_pred hccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 301 KYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|++.|++.++++++..++.+++.+
T Consensus 149 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T TIGR00881 149 ------------------------WHWVFIVPGIIAIIVSLICFLLLR 172 (379)
T ss_pred ------------------------chhHHHHHHHHHHHHHHHHheeeC
Confidence 999999888777766555554443
No 68
>PRK11043 putative transporter; Provisional
Probab=99.44 E-value=7.5e-12 Score=122.75 Aligned_cols=160 Identities=9% Similarity=0.098 Sum_probs=126.3
Q ss_pred hhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-h
Q 017754 148 ASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-I 224 (366)
Q Consensus 148 ~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~ 224 (366)
+......+...+|++.+++|.+..+. ..+++.++..++.+++|+++||++||+.+ ..+.++..++.++.. .
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL------LAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH------HHHHHHHHHHHHHHHHh
Confidence 33444455666788889999987766 78888999999999999999999998755 555555666555544 3
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccC
Q 017754 225 GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNG 304 (366)
Q Consensus 225 ~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~ 304 (366)
.+...+++.+++.|++.+...+...+.++|.++.++++..++..+....+|..+ +|.++|++.+..+
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~i~~~l~~~~g------------ 158 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPAL-APLLGAWLLNHFG------------ 158 (401)
T ss_pred cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCC------------
Confidence 445567778888899888777777788999999998999999988888899986 9999999998776
Q ss_pred CCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 305 NMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 305 ~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
|++.|++.+++.++..++.+.+
T Consensus 159 --------------------~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 159 --------------------WQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred --------------------hHHHHHHHHHHHHHHHHHHHHc
Confidence 9999998888777766655444
No 69
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.44 E-value=2.6e-12 Score=126.97 Aligned_cols=180 Identities=15% Similarity=0.140 Sum_probs=126.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHh----CCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL----GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~----g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
.++.++++.+|.+.+..++.......+..++|.+..+. +.+.... ..++..+...++.+.+|+++||+++|+..
T Consensus 216 ~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~ 295 (420)
T PRK09528 216 ALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNAL 295 (420)
T ss_pred HHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh
Confidence 44577888887655443333333333334456555432 3443332 56677778889999999999999997654
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHH-HHhhhhhhHHhhh
Q 017754 203 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNF-LTLASPAGSLIFS 280 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~-~~~~~~~G~~i~g 280 (366)
..+.++.+++.+++. ..++..+++..++.|++.+........++.+.++.+.+++.++. .++...+|..+ +
T Consensus 296 ------~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~i-g 368 (420)
T PRK09528 296 ------LLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVF-L 368 (420)
T ss_pred ------HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHH-H
Confidence 555555555555554 34555666777778888777666667788999999999988766 56778899996 9
Q ss_pred hHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 281 GVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 281 p~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|.+.|++.|..+ |+.+|.+.+++.+++.++.+...
T Consensus 369 ~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 369 STLAGNLYDSIG--------------------------------FQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HHHHHHHHHhhC--------------------------------chHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999887 99999998887777665555443
No 70
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1.9e-12 Score=124.59 Aligned_cols=176 Identities=15% Similarity=0.131 Sum_probs=148.1
Q ss_pred hhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHH
Q 017754 134 MKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 134 ~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
+...|..+++++.+.+..--.+...+|.+.++.|+|.++. +.+.+++...++..+.|.+|||.+.|+.+ .++
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm------~~g 100 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM------AFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee------hHH
Confidence 3445666677777777766678888999999999999887 89999999999999999999999988776 888
Q ss_pred HHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHH--HHHH
Q 017754 212 QVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA--SGIY 288 (366)
Q Consensus 212 ~~~~~~~~~l~~~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~--G~l~ 288 (366)
+++.++..+++.+. +...+.+..++-|+.-|..|+....++...|+.++||+.+++-+.+-++|+.+ -|++. +++.
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal-~~~~~~la~~~ 179 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGAL-APLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccch-HHHHHHHHHHH
Confidence 99999888888754 44456677788899989889999999999999999999999999999999997 68888 8887
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 289 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
++.+ |+.+|++-++++++..+..+...+
T Consensus 180 ~~~~--------------------------------w~~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 180 FHGG--------------------------------WRAAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred hccc--------------------------------hhHHHHHHHHHHHHHHHHHHHHhC
Confidence 7765 999999999888776666655544
No 71
>PRK03545 putative arabinose transporter; Provisional
Probab=99.43 E-value=1.3e-11 Score=120.79 Aligned_cols=179 Identities=13% Similarity=0.135 Sum_probs=127.5
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+.++.++++.+|..++..++.........++++.+.++ .|++.... ..++..+++.+|+++.|+++||++||..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~--- 273 (390)
T PRK03545 197 SLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL--- 273 (390)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH---
Confidence 35678888888876655555444444445566666655 68876654 6777888999999999999999976532
Q ss_pred hHHHHHHHHHHHHHHHHH-H-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 205 PVAMAVAQVVMAFALLYY-A-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~-~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+..+..++..++ . ..+...++++.++.|++.+.......+.+.+..+ +.++.+.|+.+....+|..+ ||.
T Consensus 274 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~-G~~ 347 (390)
T PRK03545 274 ----LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGA-GAL 347 (390)
T ss_pred ----HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHH-HHH
Confidence 22233333333222 2 2334456667778888876655666667777765 68899999999999999996 999
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 283 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 283 l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
++|+++|..+ ++..|++.+++.+++++......
T Consensus 348 ~~G~~~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 348 LGNQVSLHLG--------------------------------LSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHhccC--------------------------------hhHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999987 99999999988888777665443
No 72
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.43 E-value=1.1e-11 Score=123.89 Aligned_cols=156 Identities=13% Similarity=0.155 Sum_probs=115.2
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh-----hh
Q 017754 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-----WP 227 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~-----~~ 227 (366)
+...+|.+.++ |++..+. ..+...++..++.++.|+++||+|||+.+ ..+.++.+++.++++.. +.
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l------~~~~~~~~i~~~~~~~~~~~~~~~ 120 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL------PAGLILAAAVMLFMGFVPWATSSI 120 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH------HHHHHHHHHHHHHHHhhhcccccH
Confidence 44567777766 9887766 78888999999999999999999998755 56666666655554421 33
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCC
Q 017754 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 307 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~ 307 (366)
..+++..++.|++.|..++.....+.+.+++++++.+.++.+.+..+|+.+.+|++...+....+
T Consensus 121 ~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g--------------- 185 (452)
T PRK11273 121 AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND--------------- 185 (452)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc---------------
Confidence 45667778889988887777777889999999999999999999999876445544333332223
Q ss_pred CcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 308 PVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 308 ~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|++.|++.++++++..++.+++.++
T Consensus 186 -----------------w~~~f~i~~~~~~~~~~l~~~~~~~ 210 (452)
T PRK11273 186 -----------------WHAALYMPAFAAILVALFAFAMMRD 210 (452)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHccC
Confidence 9999999888777766655555443
No 73
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.43 E-value=4.8e-12 Score=124.92 Aligned_cols=174 Identities=16% Similarity=0.089 Sum_probs=129.8
Q ss_pred HhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHH
Q 017754 132 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 209 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~ 209 (366)
..++++++.++...++...........+|.+.++++.+..+. ..+...+...++.++.|+++||++||+.. .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l------~ 86 (417)
T PRK10489 13 LKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLI------L 86 (417)
T ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEE------E
Confidence 345666776666655555555556667888888888776655 78888889999999999999999998876 3
Q ss_pred HHHHHHHHHHHHHH------hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 210 VAQVVMAFALLYYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 210 ~~~~~~~~~~~l~~------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
.+.++.+++.+.+. ..+...+++..++.|++.+...+...+.+++.++.++++++.++.++...+|..+ ||.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~l 165 (417)
T PRK10489 87 LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVI-SPAL 165 (417)
T ss_pred ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHh-HHHH
Confidence 34443333333221 1233456677788888877777777788999999999999999999999999996 9999
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017754 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
+|.+.+..+ |++.|++.++..+++.++.+
T Consensus 166 ~g~l~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~ 194 (417)
T PRK10489 166 GGLLIAAGG--------------------------------VAWNYGLAAAGTFITLLPLL 194 (417)
T ss_pred HHHHHHHHh--------------------------------hHHHHHHHHHHHHHHHHHHH
Confidence 999998776 89998887766666554443
No 74
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.43 E-value=1.3e-11 Score=124.30 Aligned_cols=173 Identities=13% Similarity=0.106 Sum_probs=119.6
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHH
Q 017754 143 FSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALL 220 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~ 220 (366)
+.+++...........+|.+.+++|++..+. ..+...++..++.++.|+++||+|||+.. ..+.++.+++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~------~~~~~~~~~~~~ 116 (476)
T PLN00028 43 ISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS------AFLLMLTAPAVF 116 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHHHHHHHHHHH
Confidence 3334444444455566788899999987765 56667778888999999999999997654 555566666655
Q ss_pred HHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhh
Q 017754 221 YYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLL 299 (366)
Q Consensus 221 l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~ 299 (366)
+.+ ..+...+++++++.|++.+... ....+++|+|+.++||.+.|+.+....+|+.+ ++.+.+.+.+.....
T Consensus 117 ~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~-~~~~~~~i~~~~~~~----- 189 (476)
T PLN00028 117 CMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGV-TQLLMPLVFPLIKDA----- 189 (476)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhc-----
Confidence 544 3455566778888898877643 34557899999999999999998877777775 666666554432100
Q ss_pred hhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 300 WKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.+.+...||++|++.++++++.+++.+++
T Consensus 190 ------------------~~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 190 ------------------GAPSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred ------------------CCcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 00011139999999998887766655544
No 75
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.43 E-value=3.5e-12 Score=126.13 Aligned_cols=154 Identities=12% Similarity=0.089 Sum_probs=107.2
Q ss_pred hhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHh--CCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017754 133 LMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL--GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 133 l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~--g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
++++.+|+..+.+++.......+.+++|.+.+++ |++.... +.++..++..+|++++|+++||+++|+.. +
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~-----~ 313 (412)
T TIGR02332 239 IFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHH-----T 313 (412)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHH-----H
Confidence 3457789888888888777778889999999885 5554443 77888899999999999999999875321 1
Q ss_pred HHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHH
Q 017754 209 AVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l 287 (366)
....++.++++++.. ..++...+.+..+.++|.....+..+....|.+|++++++++|+.+....+|+.+ +|.+.|.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~-~p~~~g~i 392 (412)
T TIGR02332 314 ALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSAL-SPFLIGIL 392 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhh-hhhhcccc
Confidence 223333333332222 2222222222233334433333444455578899999999999999999999996 99999999
Q ss_pred Hhhhh
Q 017754 288 YDYYA 292 (366)
Q Consensus 288 ~d~~~ 292 (366)
.|..+
T Consensus 393 ~~~~g 397 (412)
T TIGR02332 393 KDATG 397 (412)
T ss_pred cccCC
Confidence 99876
No 76
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.42 E-value=2.2e-12 Score=129.53 Aligned_cols=168 Identities=13% Similarity=0.053 Sum_probs=124.3
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHH
Q 017754 143 FSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALL 220 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~ 220 (366)
+.+++.+..-..+...+|.+.+++|.+..+. ..+.+.++..++.+..|+++||+|+|+.+ .++.++.+++.+
T Consensus 36 ~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l------~~~~~~~~~~~~ 109 (467)
T PRK09556 36 IGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFL------PFLLILSAICML 109 (467)
T ss_pred HHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchH------HHHHHHHHHHHH
Confidence 3333333344445566889999999988775 78888899999999999999999998766 444444433333
Q ss_pred HHH------hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhh
Q 017754 221 YYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK 294 (366)
Q Consensus 221 l~~------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~ 294 (366)
+++ ..+...+++.+++.|++.+..++....+++++|++++||.+.|+...+.++|..+ ++.+..++.+....
T Consensus 110 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l-~~~i~~~~~~~~~~- 187 (467)
T PRK09556 110 GFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAG-AGGVALWGANYFFD- 187 (467)
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhH-HHHHHHHHHHhhcc-
Confidence 322 2345677888899999988888888899999999999999999999999999996 88887776654310
Q ss_pred hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 295 QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.+|+..|.+.+++.++.+++.+++
T Consensus 188 ----------------------------~~~~~~f~~~g~~~~~~~i~~~~~ 211 (467)
T PRK09556 188 ----------------------------GHVIGMFIFPSIIALIIGFIGLRY 211 (467)
T ss_pred ----------------------------CcchhHHHHHHHHHHHHHHHHHHh
Confidence 028888888777766655555444
No 77
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.42 E-value=1e-11 Score=121.98 Aligned_cols=130 Identities=14% Similarity=0.143 Sum_probs=112.2
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHH
Q 017754 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEI 230 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l 230 (366)
.....+|.+.+++|.+..+. ..+.+.++..++.+..|+++||+|||+.+ ..+..+.+++.++.+ .++...+
T Consensus 27 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l------~~~~~l~~~~~~~~~~a~~~~~l 100 (393)
T PRK09705 27 SVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV------AISLLLIAVGALMRELYPQSALL 100 (393)
T ss_pred ccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH------HHHHHHHHHHHHHHHHCcchHHH
Confidence 34567899999999988776 88888999999999999999999998877 788888888888776 4456678
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhh
Q 017754 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~ 291 (366)
++++++.|++.+..++....++.+.|+ ++++.+.+....+..+|..+ |+.+.+++.++.
T Consensus 101 l~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~-g~~~~~~l~~~~ 159 (393)
T PRK09705 101 LSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGL-GAAITPWLVQHS 159 (393)
T ss_pred HHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 889999999999988888889999996 78999999999998999986 899999888765
No 78
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.41 E-value=2.5e-11 Score=117.27 Aligned_cols=177 Identities=17% Similarity=0.137 Sum_probs=123.6
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
.++.++++++|.++...++.......+..++|.+. +++|.+.... ..+...+...+++++.|+++||++||+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--- 268 (375)
T TIGR00899 192 VRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM--- 268 (375)
T ss_pred hhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH---
Confidence 44466777787766555554443344455667665 5578877654 44555566777889999999999987644
Q ss_pred HHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 206 VAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
..+.++..+.+..+. ..+...+++..++.|++.|...+....++.|.+|. +++.+.++.+....+|..+ +|.++
T Consensus 269 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~-g~~~~ 343 (375)
T TIGR00899 269 ---LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWII-AGSVG 343 (375)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHH-HHHHH
Confidence 333333333333332 23344455566777888888777777888898865 5679999999999999996 99999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017754 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
|.+.|..+ |+..|++.+++++++.++...
T Consensus 344 g~~~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 344 GILAERWS--------------------------------YHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHhcc--------------------------------chhHHHHHHHHHHHHHHHHhe
Confidence 99999876 999999888877777665543
No 79
>PRK12382 putative transporter; Provisional
Probab=99.40 E-value=1.2e-11 Score=120.87 Aligned_cols=152 Identities=13% Similarity=0.071 Sum_probs=113.9
Q ss_pred hhhhHHHHHHHHHHhhhhHHHHHhcHHHH-HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHH
Q 017754 134 MKADFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAV 210 (366)
Q Consensus 134 ~~~~~~ll~~~~~~~~~~~~~~~~~l~~i-~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~ 210 (366)
.+..+|.++++.++...........+|.+ .+++|.+.... ..+...+...++++.+|+++||+|||+.+ ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l------~~ 86 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA------LQ 86 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH------HH
Confidence 44456666666666555555556667754 56889987766 88999999999999999999999998765 44
Q ss_pred HHHHHHHHHH---HHH------hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 211 AQVVMAFALL---YYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 211 ~~~~~~~~~~---l~~------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
+.+...++.+ +.. ..+...+++++++.|++.+...+...+++.|.+++++|+++.++...+..+|..+ ||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~-g~ 165 (392)
T PRK12382 87 GMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAA-GA 165 (392)
T ss_pred HHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHH-HH
Confidence 3333333222 111 1233467788899999988877777788899999999999999999988888886 99
Q ss_pred HHHHHHHhhhh
Q 017754 282 VIASGIYDYYA 292 (366)
Q Consensus 282 ~l~G~l~d~~~ 292 (366)
.+++++.+..+
T Consensus 166 ~~~~~l~~~~g 176 (392)
T PRK12382 166 PLGLLLHSHFG 176 (392)
T ss_pred HHHHHHHhccC
Confidence 99999988765
No 80
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.40 E-value=1.9e-11 Score=119.23 Aligned_cols=176 Identities=16% Similarity=0.098 Sum_probs=125.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
+++.++++.+|.+.+.+++.....+.+.+|+|++.++.|++.... ..++..+. |.+..++++||..||.. |...
T Consensus 185 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~~~~~~~l~~~~---g~~g~~~~~d~~~r~~~--r~~~ 259 (368)
T TIGR00903 185 FGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDIAGDAVALAILA---GLIGVAVIPDRVARAGL--RSIY 259 (368)
T ss_pred HHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH---HHHHHHHhhHHhhhhhh--HHHH
Confidence 567889999999999999998888899999999999888876422 44444443 44556899999877532 2222
Q ss_pred HHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHH
Q 017754 208 MAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~ 286 (366)
.....++++++...+.. .++........+.+++.+..++..+++.+|.+|++.||++.|+.+..+.+|+.+ +|.+.|.
T Consensus 260 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~-~~~~~~~ 338 (368)
T TIGR00903 260 IRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVA-LALAAML 338 (368)
T ss_pred HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHH-HHHHHHH
Confidence 23233333444333332 223333444555667777777778889999999999999999999999999986 8988887
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017754 287 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 287 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
+.. + ....|.+.++.++++++..+
T Consensus 339 ~~~--~--------------------------------~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 339 FIS--S--------------------------------AEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred Hhc--C--------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence 773 3 56677777777777666643
No 81
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.40 E-value=1.8e-11 Score=117.58 Aligned_cols=160 Identities=14% Similarity=0.177 Sum_probs=113.9
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
.++.++++.+|.+.+..++.......+..++|.+.++ +|++.... ..++..++..+|+++.|+++||..+++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--- 285 (379)
T TIGR00881 209 LQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG--- 285 (379)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch---
Confidence 4566788889988877777776666777788888754 68876654 67788889999999999999987544322
Q ss_pred HHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 206 VAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
...........++...+.. .+.....+..++.|++.++........++|.+|++++|++.|+.+....+|+.+ +|.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-~~~ 364 (379)
T TIGR00881 286 PLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGIL-AGL 364 (379)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhh-hhh
Confidence 1111222222222222221 122334455566676655656666778899999999999999999999999996 999
Q ss_pred HHHHHHhhhh
Q 017754 283 IASGIYDYYA 292 (366)
Q Consensus 283 l~G~l~d~~~ 292 (366)
+.|.+.|..+
T Consensus 365 ~~g~l~~~~g 374 (379)
T TIGR00881 365 PLGYLADGFG 374 (379)
T ss_pred hHHHHHHhhc
Confidence 9999999876
No 82
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.40 E-value=3.6e-11 Score=119.48 Aligned_cols=180 Identities=12% Similarity=0.010 Sum_probs=112.7
Q ss_pred CHHHHhhhhhHHHHHHHHHHh-hhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017754 128 TLPQALMKADFLLLFFSLVLA-SGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~-~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
++++.++++++|.+.+..++. ....+.+..|+|++.+ .+|++..+. ..++..+...++.++.|+++||++||+..
T Consensus 234 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~- 312 (432)
T PRK10406 234 SLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSM- 312 (432)
T ss_pred cHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH-
Confidence 577888888888776655543 4555667788999875 478886554 56666777788899999999999987533
Q ss_pred hhHHHHHHHHHHHHHH---HH-HHhh-hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhh-hHH
Q 017754 204 RPVAMAVAQVVMAFAL---LY-YAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPA-GSL 277 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~---~l-~~~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~-G~~ 277 (366)
.+..++.++.. +. .... ++...+....+.+++.+...+..+.+++|+||++.|++++|+.+....+ .+.
T Consensus 313 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~ 387 (432)
T PRK10406 313 -----LCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGG 387 (432)
T ss_pred -----HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHh
Confidence 22222111111 11 1111 1222222222222333444456677889999999999999998876554 344
Q ss_pred hhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 278 i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
. .|.+.+.+ +.++ .|...+++.+++++++.+..+++
T Consensus 388 ~-~p~~~~~l-~~~g-------------------------------~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 388 S-AEYVALSL-KSIG-------------------------------METAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred H-HHHHHHHH-HHhC-------------------------------CCcHHHHHHHHHHHHHHHHHHHh
Confidence 3 67777754 5544 26666666666666666555543
No 83
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.40 E-value=7.4e-12 Score=127.64 Aligned_cols=176 Identities=17% Similarity=0.105 Sum_probs=128.8
Q ss_pred hhhhHHHHHHHHHHhhhh----HHHHHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017754 134 MKADFLLLFFSLVLASGS----GLTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 134 ~~~~~~ll~~~~~~~~~~----~~~~~~~l~~i~~~~g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
++++++..+.++.+.... .......++++.+++|-++... +.+...+...++.++.|.+||.+|||+..
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~------ 111 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF------ 111 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH------
Confidence 455666554433333222 2223455788899998776554 77778889999999999999999998766
Q ss_pred HHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHH
Q 017754 209 AVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l 287 (366)
.++.++..+|.++.+. .+...+..+..+.|+|.|... +....++|+.|.|.|+..+++......+...+ ||.++..+
T Consensus 112 i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~-~~~ia~~~ 189 (599)
T PF06609_consen 112 IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWI-SPLIAQLF 189 (599)
T ss_pred HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcc-cHHHHHHh
Confidence 8888999999988774 455677788899999988765 45667899999999988887766554444443 66666555
Q ss_pred HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 288 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
.... +|||.|++.++...+++++..+++++
T Consensus 190 ~~~~--------------------------------~WRw~~~~~~i~~~i~~vl~~~fY~P 219 (599)
T PF06609_consen 190 AAHS--------------------------------GWRWIFYIFIIWSGIALVLIFFFYFP 219 (599)
T ss_pred ccCC--------------------------------CcchHHHHHHHHHHHHHHHHHHHhCC
Confidence 4332 39999999999888887776666554
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.40 E-value=1.6e-11 Score=118.53 Aligned_cols=160 Identities=18% Similarity=0.110 Sum_probs=112.2
Q ss_pred CCHHHHhhhhh--HHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 017754 127 FTLPQALMKAD--FLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFA 201 (366)
Q Consensus 127 ~~~~~~l~~~~--~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~ 201 (366)
.++++.++++. ++......++..........++|.+. +++|++.... ..++..+++.+++++.|+++||++||+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 287 (394)
T TIGR00883 208 GPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPV 287 (394)
T ss_pred CCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 35677777765 66666666555555556667788888 5578876654 6777888999999999999999998754
Q ss_pred CchhHHHHHHHHHHHHHHHH-HH-h--hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHH-HhhhhhhH
Q 017754 202 YPRPVAMAVAQVVMAFALLY-YA-I--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFL-TLASPAGS 276 (366)
Q Consensus 202 ~~R~~~~~~~~~~~~~~~~l-~~-~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~-~~~~~~G~ 276 (366)
. +....+....+..+ .. . .+....+...++.|++.+..++...+.++|.+|.+.+++++++. ++...+|+
T Consensus 288 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~ 362 (394)
T TIGR00883 288 L-----IIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFG 362 (394)
T ss_pred H-----HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHh
Confidence 3 11222222222111 11 1 22334455666778888888888899999999999999999874 55566788
Q ss_pred HhhhhHHHHHHHhhhh
Q 017754 277 LIFSGVIASGIYDYYA 292 (366)
Q Consensus 277 ~i~gp~l~G~l~d~~~ 292 (366)
.+ +|.++|++.|..+
T Consensus 363 ~~-~p~~~g~l~~~~g 377 (394)
T TIGR00883 363 GF-APYIAAALVAMTG 377 (394)
T ss_pred hH-HHHHHHHHHHHcC
Confidence 75 9999999999876
No 85
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.39 E-value=1.5e-11 Score=123.16 Aligned_cols=159 Identities=17% Similarity=0.143 Sum_probs=114.2
Q ss_pred HhcHHHHHHHh--------CCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh
Q 017754 156 IDNLGQICQSL--------GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG 225 (366)
Q Consensus 156 ~~~l~~i~~~~--------g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~ 225 (366)
....|.+.+.+ +.+.... ..+.+.++..+|.+++|+++||+|||+.+ .++.+++.++.+..+..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~------~~~~~l~~i~~~~~~~~ 105 (479)
T PRK10077 32 SGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL------KIAAVLFFISALGSAWP 105 (479)
T ss_pred hHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHHHHHHHHHHHHHHhh
Confidence 33445565555 6665554 78999999999999999999999998766 55555555554443321
Q ss_pred ----------h---hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 226 ----------W---PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 226 ----------~---~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+ ...+++++++.|++.|+.++..+++++|++++++||.+.++...+..+|..+ ++.+++.+.....
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~ 184 (479)
T PRK10077 106 EFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLV-VYFVNYFIARSGD 184 (479)
T ss_pred ccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHH-HHHHHHHHhccCc
Confidence 1 2356788999999999999999999999999999999999999999999886 7766555543221
Q ss_pred hhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017754 293 EKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
.. . .+...||+.|++.++..++..+..++
T Consensus 185 ~~-----------------------~-~~~~gWr~~f~~~~~~~~~~~~~~~~ 213 (479)
T PRK10077 185 AS-----------------------W-LNTDGWRYMFASEAIPALLFLMLLYF 213 (479)
T ss_pred cc-----------------------c-cccCChHHHHHHHHHHHHHHHHHHHc
Confidence 00 0 01113999999887777665544333
No 86
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.38 E-value=1.3e-11 Score=120.85 Aligned_cols=178 Identities=14% Similarity=0.160 Sum_probs=123.9
Q ss_pred HHHhhhhhHHHHHHH-HHHhhhhHHHHHhcHHHHHHHhCCChhH------HHHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017754 130 PQALMKADFLLLFFS-LVLASGSGLTVIDNLGQICQSLGYADTS------IYVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~-~~~~~~~~~~~~~~l~~i~~~~g~s~~~------~~vsl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
.+.+++++++..++. .++.......+..+++.+..+.+.+... .+.++..++..++++.+|+++||++||+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~ 291 (408)
T PRK09874 212 VTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKIL 291 (408)
T ss_pred HHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhH
Confidence 345566666543322 2222222223445566666664433221 144556678888999999999999987654
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 203 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
..+.++.+++.+.+. ..+...+++..++.|++.+...+...+.+.+..+.+++|..+++.+....+|..+ ||
T Consensus 292 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~-gp 364 (408)
T PRK09874 292 ------ITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVT-GP 364 (408)
T ss_pred ------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHh-hH
Confidence 444444444444443 2344556667778899988888888888888888899999999999999999996 99
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 282 ~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.++|.+.|..+ |+..|++.+++.+++++.....
T Consensus 365 ~~~G~l~~~~g--------------------------------~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 365 LMGAAISANYG--------------------------------FRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHHhhcc--------------------------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 99999998876 9999999998888877666543
No 87
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.37 E-value=1.2e-11 Score=122.48 Aligned_cols=125 Identities=21% Similarity=0.279 Sum_probs=98.4
Q ss_pred HHHHhcHHHHHHHhCCC--------hhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHH
Q 017754 153 LTVIDNLGQICQSLGYA--------DTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY 222 (366)
Q Consensus 153 ~~~~~~l~~i~~~~g~s--------~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~ 222 (366)
..+...++.+..+++++ .... ..+.+.++..++.+++|+++||+|||+.+ .++.++..++.++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~------~~~~~~~~~~~~~~ 118 (481)
T TIGR00879 45 GVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL------LIIALLFVIGAILM 118 (481)
T ss_pred chhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH------HHHHHHHHHHHHHH
Confidence 34445567677776665 3433 78889999999999999999999997765 55555556555554
Q ss_pred Hh-hh---hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 223 AI-GW---PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 223 ~~-~~---~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
.. .. ...+++++++.|++.+..++...++++|.+++++|+.+.++.+....+|..+ ++.+.
T Consensus 119 ~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~~~ 183 (481)
T TIGR00879 119 GLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILV-AYGFG 183 (481)
T ss_pred HHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHH-HHHHH
Confidence 32 22 2367888999999999999999999999999999999999999999999996 88877
No 88
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.37 E-value=2.7e-11 Score=118.59 Aligned_cols=149 Identities=13% Similarity=0.083 Sum_probs=111.4
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHH-HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i-~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
++..+.+..+............+|.+ .+++|.+..+. ..+...++..++.+..|+++||+|||+.+ ..+.+
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l------~~~~~ 89 (399)
T PRK05122 16 RIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV------VFGLC 89 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH------HHHHH
Confidence 44445555555544444555667764 56789887765 78888999999999999999999998876 55554
Q ss_pred HHHHHHHHHH---hh------hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 214 VMAFALLYYA---IG------WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 214 ~~~~~~~l~~---~~------~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
+.+++.+.+. .. +...+++.+++.|++.+...+....++.|.++.++|+.+.++...+..+|..+ ||.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~l~ 168 (399)
T PRK05122 90 GCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI-GAPLG 168 (399)
T ss_pred HHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH-HHHHH
Confidence 4444333221 11 12356778899999998888888888899999999999999988888888885 99999
Q ss_pred HHHHhhhh
Q 017754 285 SGIYDYYA 292 (366)
Q Consensus 285 G~l~d~~~ 292 (366)
+.+.+..+
T Consensus 169 ~~l~~~~g 176 (399)
T PRK05122 169 VLLYHWGG 176 (399)
T ss_pred HHHHHccc
Confidence 99988766
No 89
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.37 E-value=2.1e-11 Score=120.03 Aligned_cols=148 Identities=11% Similarity=0.025 Sum_probs=109.1
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017754 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
+..+++.++..........+++.+.+++|.+..+. ..+.+.++..++.++.|+++||+|||+.. ..+.++.+
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l------~~~~~~~~ 89 (402)
T TIGR00897 16 LWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM------MIGLLLWC 89 (402)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH------HHHHHHHH
Confidence 33344444444443344456778889999987765 78899999999999999999999998765 55555555
Q ss_pred HHHHHH---Hh--hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhh
Q 017754 217 FALLYY---AI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 217 ~~~~l~---~~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~ 291 (366)
++.+++ .. .+...+++.+++.|++.+.......+.+.+.+++++++++.|+.++..++|..+++|.++|++.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~ 169 (402)
T TIGR00897 90 VGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF 169 (402)
T ss_pred HHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 544332 22 2344566778888888877666666778899999999999999999999997434899999988876
Q ss_pred h
Q 017754 292 A 292 (366)
Q Consensus 292 ~ 292 (366)
+
T Consensus 170 g 170 (402)
T TIGR00897 170 G 170 (402)
T ss_pred c
Confidence 5
No 90
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.37 E-value=7.8e-12 Score=126.72 Aligned_cols=173 Identities=12% Similarity=0.047 Sum_probs=108.0
Q ss_pred hhHHHHHhcHHHHHHHhCCChhH------------H--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 150 GSGLTVIDNLGQICQSLGYADTS------------I--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 150 ~~~~~~~~~l~~i~~~~g~s~~~------------~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
...++...++|.+.++.|++... . ...+..++..+|.+++++++||+|||+.. .++.+++
T Consensus 302 ~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l------~~~~~~~ 375 (502)
T TIGR00887 302 IAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ------LMGFFIL 375 (502)
T ss_pred HHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH------HHHHHHH
Confidence 34445666789999888886431 1 23344456667889999999999997654 4444444
Q ss_pred HHHHHHHHhh----h-hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 216 AFALLYYAIG----W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 216 ~~~~~l~~~~----~-~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
+++.+++... . ...+....+...++..+..++.+.+.+|+||.+.|+++.|+.+..+.+|+++ +|.+.|++.|.
T Consensus 376 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~-~~~~~~~l~~~ 454 (502)
T TIGR00887 376 TVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAII-GQFGFLYLAQH 454 (502)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHH-HHHHhhhhhcc
Confidence 4444333311 1 1111111111222222345567778899999999999999999999999996 99999999986
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchH
Q 017754 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
.+..++. ++...+...|++.+++++++.+.. ++.+++++
T Consensus 455 ~~~~~~~----------------------~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~ 493 (502)
T TIGR00887 455 GDPTKGY----------------------PTGIWMGHVLEIFALFMFLGILFT-LLIPETKG 493 (502)
T ss_pred ccccccc----------------------cccccchHHHHHHHHHHHHHHHHh-eEeccCCC
Confidence 4311000 000015667888888887776654 34456554
No 91
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.37 E-value=2.9e-11 Score=114.61 Aligned_cols=170 Identities=22% Similarity=0.292 Sum_probs=137.1
Q ss_pred hhHHHHHHHHHHhhhhHHHHHhcHHHHHHHh-CCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhc-cCchhHHHHHH
Q 017754 136 ADFLLLFFSLVLASGSGLTVIDNLGQICQSL-GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKF-AYPRPVAMAVA 211 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~-g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~-~~~R~~~~~~~ 211 (366)
+.+|.+.+..++.......+..+.|.+.++. |++.... ..+...++..+++++.|+++||++||+ .. ..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~ 248 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLL------LIG 248 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH------HHH
Confidence 5566666666666666667778888888775 7777655 778888999999999999999999876 44 566
Q ss_pred HHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 212 QVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 212 ~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
..+..++.+.+.. .+....++..++.|++.+..++....++.|.++.+++++.+++.+....+|..+ +|.+.|.++|.
T Consensus 249 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~i~g~l~~~ 327 (352)
T cd06174 249 LLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGAL-GPLLAGLLLDT 327 (352)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcc
Confidence 6666666666553 335567778888999999999999999999999999999999999999999996 99999999986
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017754 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
.+ |+..|++.+++++++.+...
T Consensus 328 ~~--------------------------------~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 328 GG--------------------------------YGGVFLILAALALLAALLLL 349 (352)
T ss_pred cC--------------------------------cchHHHHHHHHHHHHHHHhe
Confidence 65 89999998888877766543
No 92
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.37 E-value=4.1e-11 Score=118.26 Aligned_cols=183 Identities=11% Similarity=0.036 Sum_probs=128.2
Q ss_pred HHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
+..++++.++.+++..++... ...+..++|.+.++ +|++.... ..+...++..+|.++.|+++||.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~----- 291 (417)
T PRK10489 218 RFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLL----- 291 (417)
T ss_pred HHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchH-----
Confidence 345567776655544433322 23455678888887 78876554 6677888889999999999987544322
Q ss_pred HHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHH
Q 017754 207 AMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G 285 (366)
+..+.++++++.+++.. .+.....++.++.|++.+...+...+++.+.+|.+.+|+++++.+....+|..+ ||.+.|
T Consensus 292 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~-g~~l~G 369 (417)
T PRK10489 292 -MLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAI-GAALLG 369 (417)
T ss_pred -HHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhH-HHHHHH
Confidence 24455555566555543 333445566777888877766777788899999999999999999999999996 999999
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchH
Q 017754 286 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 286 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
++.|..+ ++..+++.+++.++..++.....+++|+
T Consensus 370 ~l~~~~g--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 370 GLGAMMT--------------------------------PVASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred HHHHHhc--------------------------------hhhHHHHHHHHHHHHHHHHHHhcccccc
Confidence 9999877 7778877776666655555454455443
No 93
>TIGR00898 2A0119 cation transport protein.
Probab=99.36 E-value=3.2e-11 Score=121.93 Aligned_cols=182 Identities=13% Similarity=0.096 Sum_probs=120.4
Q ss_pred CCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
.++++.++++.++...+..++...........++.....++.+.. ....+.++....+.++.++++||+|||+..
T Consensus 314 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~l~dr~grr~~~---- 388 (505)
T TIGR00898 314 YSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGNIY-LDLFISGLVELPAKLITLLLIDRLGRRYTM---- 388 (505)
T ss_pred CcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCChH-HHHHHHHHHHHHHHHHHHHHHHHhCCHHHH----
Confidence 467888888888766554433333222222222333334444432 234455677788999999999999987654
Q ss_pred HHHHHHHHHHHHHHHHHh-hhh--HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 207 AMAVAQVVMAFALLYYAI-GWP--GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~-~~~--~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
.+..++.+++.+++.. .+. ....+..++.+++.+..++..+.+++|.+|++.|+++.|+.++...+|+.+ +|.+
T Consensus 389 --~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i-~p~i 465 (505)
T TIGR00898 389 --AASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSII-SPFL 465 (505)
T ss_pred --HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHH-HhHH
Confidence 5555555655555442 222 334445556667777778888899999999999999999999999999996 9999
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhch
Q 017754 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r 351 (366)
.+ + +..+ +...+.+.+++++++.++.+++ +++|
T Consensus 466 ~~-~-~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~l-pet~ 498 (505)
T TIGR00898 466 VY-L-GEKW--------------------------------LFLPLVLFGGLALLAGILTLFL-PETK 498 (505)
T ss_pred HH-H-HHHH--------------------------------HhhHHHHHHHHHHHHHHHHHcC-cCCC
Confidence 88 3 3333 5667777777777776665544 4444
No 94
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.4e-11 Score=123.25 Aligned_cols=192 Identities=12% Similarity=0.086 Sum_probs=142.4
Q ss_pred CCCCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 017754 125 EDFTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFA 201 (366)
Q Consensus 125 ~~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~ 201 (366)
.+.++++.++++.+|.++++.++.......+..++|.+.++ +|++..+. +.+++.+...+..+++|.++||+-+| .
T Consensus 247 ~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ 325 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-I 325 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-c
Confidence 45689999999999999999999999999999999999976 78876655 88899999999999999999999876 3
Q ss_pred C----chhHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhh
Q 017754 202 Y----PRPVAMAVAQVVMAFALLYYAIGW--PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAG 275 (366)
Q Consensus 202 ~----~R~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G 275 (366)
. .|+.+-.+++...++.++.++... ...+.+.....+.+..+..............+++.+..+|+.+....+.
T Consensus 326 ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~ 405 (466)
T KOG2532|consen 326 LSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALA 405 (466)
T ss_pred CchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHH
Confidence 3 377788888888888877766332 2212222222223322222222222222226889999999999999999
Q ss_pred HHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 276 SLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 276 ~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
+++ +|.+.|.+..... +. .|+..|++.+++.+++.+...++.
T Consensus 406 ~~~-~P~~vg~~~~~~t-~~----------------------------eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 406 GFI-APLLVGIIVTDNT-RE----------------------------EWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHH-HHHheeeEeCCCC-HH----------------------------HHHHHHHHHHHHHHHhchheeEee
Confidence 996 9999999984211 11 299999999999988886655543
No 95
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.35 E-value=5.2e-11 Score=120.38 Aligned_cols=144 Identities=13% Similarity=0.021 Sum_probs=106.8
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCC--ChhH--H----HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGY--ADTS--I----YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 209 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~--s~~~--~----~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~ 209 (366)
++..+++.++-......+....|.+.+++.. +... . ..++..++..+|.++.|+++||+|||+.+ .
T Consensus 18 ~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l------~ 91 (490)
T PRK10642 18 ITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL------A 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH------H
Confidence 3444555555555555666677878777743 2221 1 13556677889999999999999998876 7
Q ss_pred HHHHHHHHHHHHHHhh-hhH--------HHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhh
Q 017754 210 VAQVVMAFALLYYAIG-WPG--------EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFS 280 (366)
Q Consensus 210 ~~~~~~~~~~~l~~~~-~~~--------~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~g 280 (366)
++.++++++.++.+.. +.. .+++++++.|++.|+.++...++++|++|.++||...++...+..+|..+ |
T Consensus 92 ~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~l-g 170 (490)
T PRK10642 92 ITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVL-G 170 (490)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH-H
Confidence 7777777777776633 322 36788999999999999999999999999999999999988888888775 7
Q ss_pred hHHHHHHH
Q 017754 281 GVIASGIY 288 (366)
Q Consensus 281 p~l~G~l~ 288 (366)
+.+...+.
T Consensus 171 ~~~~~~~~ 178 (490)
T PRK10642 171 AGVVVLIS 178 (490)
T ss_pred HHHHHHHH
Confidence 66555443
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.35 E-value=7.7e-11 Score=115.28 Aligned_cols=175 Identities=14% Similarity=0.070 Sum_probs=121.3
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHH-HHHhhhhhhhhhhhhhhhhhccCch
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~-i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
++++.+|++.+|......++..........+.+.+.++.|++..++ ...... +...+|.+++|++.||+++|+..
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l-- 277 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF-- 277 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH--
Confidence 3567888888887776666665555555567778888899998776 344443 45667889999999999987654
Q ss_pred hHHHHHHHHHHHHHHHH-HHh------hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCC-CchhhHHHHHHhhhhhhH
Q 017754 205 PVAMAVAQVVMAFALLY-YAI------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGS 276 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l-~~~------~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~~~~~G~ 276 (366)
..+.++.++..+. +.. .....++...++.+++.|..++...+...+..++ +++|+.+++.+....+|.
T Consensus 278 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~ 353 (390)
T TIGR02718 278 ----ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGE 353 (390)
T ss_pred ----HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Confidence 3333322121111 111 1112233333445666777777777777777776 789999999999999999
Q ss_pred HhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHH
Q 017754 277 LIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMV 341 (366)
Q Consensus 277 ~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~ 341 (366)
.+ ||.++|+++|..+ |+..|++.+++.+++.+
T Consensus 354 ~~-g~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 354 LI-ASSIAGYLTDRFG--------------------------------YAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HH-HHHHHHHHHHHHc--------------------------------cHHHHHHHHHHHHHHHH
Confidence 96 9999999999887 88888887766666543
No 97
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.35 E-value=5.3e-11 Score=116.15 Aligned_cols=149 Identities=15% Similarity=0.098 Sum_probs=122.5
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHH
Q 017754 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ 212 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~ 212 (366)
++++|+++.+.++...........+|.+.+++|.+..++ ..+...++..++++..|+++||+|||+.. ..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~------~~~~ 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY------YLAS 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH------HHHH
Confidence 445888887777777666667788999999999987666 88888999999999999999999998766 5566
Q ss_pred HHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 213 VVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 213 ~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
++.+++.++.. ..+...+++++++.|++.+..++.....+.+.++.++++.+++.......+|..+ ||.+.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-g~~~~~~l~~~ 156 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVL-GQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHhccccc
Confidence 66666666555 3455677888999999998887777777788888899999999999999999996 99999988664
No 98
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.35 E-value=5.8e-11 Score=117.19 Aligned_cols=158 Identities=13% Similarity=0.147 Sum_probs=108.0
Q ss_pred CHHHHhhhhhHHHHHHHH---HHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017754 128 TLPQALMKADFLLLFFSL---VLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~---~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
++++.++++.++.....+ ++..+....+..++|.+.++.|++.... ..++..++..++++++|+++||++||+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~ 299 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF 299 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 466778888777543322 2222333345678899988889876654 67778889999999999999999987544
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHH--hhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhh
Q 017754 203 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSY--GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~--g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
..+.++.++..+++. ........+..+++|++. .+..++.+..+.|.+|.+.+|++.|+.+....+|+.+
T Consensus 300 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~- 372 (426)
T PRK12307 300 ------SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTF- 372 (426)
T ss_pred ------HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHH-
Confidence 344444433333322 222222223333444332 3344667788899999999999999999999999995
Q ss_pred hhHHHHHHHhhhh
Q 017754 280 SGVIASGIYDYYA 292 (366)
Q Consensus 280 gp~l~G~l~d~~~ 292 (366)
+|.+.|++.|..+
T Consensus 373 gp~~~g~l~~~~g 385 (426)
T PRK12307 373 NSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHHHccc
Confidence 9999999998876
No 99
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.34 E-value=1.4e-10 Score=114.86 Aligned_cols=157 Identities=15% Similarity=0.140 Sum_probs=109.9
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
+++.++++.+|.+.+..++............+++.+. ++.+.... +.++..++..++.+++|+++||+++|+..
T Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~---- 290 (437)
T TIGR00792 215 FKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF---- 290 (437)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----
Confidence 4566778888877766665554444443444444433 33222222 56667888899999999999999987654
Q ss_pred HHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhC-------CCchhhHHHHHHhhhhhhHH
Q 017754 207 AMAVAQVVMAFALLYYAI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-------LKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-------~~~~g~~~g~~~~~~~~G~~ 277 (366)
..+.++++++.+++.. .+...+++..++.|++.+...+..+++++|..+ .+..|..+|+.+....+|..
T Consensus 291 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~ 368 (437)
T TIGR00792 291 --AGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQA 368 (437)
T ss_pred --HHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHH
Confidence 4555555555554432 223345566677888888888888888888754 56689999999999999999
Q ss_pred hhhhHHHHHHHhhhh
Q 017754 278 IFSGVIASGIYDYYA 292 (366)
Q Consensus 278 i~gp~l~G~l~d~~~ 292 (366)
+ ++.+.|++.|..|
T Consensus 369 l-g~~i~g~ll~~~G 382 (437)
T TIGR00792 369 L-AGFLVGLILGIIG 382 (437)
T ss_pred H-HHHHHHHHHHHcC
Confidence 6 9999999998765
No 100
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.34 E-value=6e-11 Score=118.30 Aligned_cols=187 Identities=12% Similarity=0.127 Sum_probs=128.8
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHH
Q 017754 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
++.+|+.+++++.+...........+.+.+ ++|++.++. ..+++.+...++|+..|++.||+|.|+.. .++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~------~~~ 106 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT------VFS 106 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH------HHH
Confidence 345777777777666666666666677766 799998776 78889999999999999999999987655 555
Q ss_pred HHHHHHHHHHHHh------hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHh---hhhH
Q 017754 212 QVVMAFALLYYAI------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI---FSGV 282 (366)
Q Consensus 212 ~~~~~~~~~l~~~------~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i---~gp~ 282 (366)
.++.++..++.+. ++...+++..++.|++ |+.++.....++++|+++++|++.|+....+++|..+ +.|.
T Consensus 107 ~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 107 TAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 5555565555543 3556788889999997 6778888889999999999999999996555666653 1343
Q ss_pred HHH-HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCccc-CCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 283 IAS-GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCL-GSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 283 l~G-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~-g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
+.+ .+++..+.+.. . .-. +...|+.++++...+.+++.++.+++..
T Consensus 186 ~i~~~l~~~~G~~~~----------------~----~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 186 VIFVPVFAFLGVNGV----------------P----QADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHHhccccc----------------c----ccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 332 23333331000 0 000 1223888888888877777766665533
No 101
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.34 E-value=4.6e-11 Score=115.23 Aligned_cols=159 Identities=12% Similarity=0.029 Sum_probs=116.0
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
..++.++++.+|.+.+..++..........++|.+.++.|++.... ..++..++..+++++.|+++||+++|+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~--- 265 (355)
T TIGR00896 189 TPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGI--- 265 (355)
T ss_pred CCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHH---
Confidence 4567788899998776666655666667788999999889887654 78888999999999999999999543221
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCC-CchhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 206 VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
+.++.++++++.+.+............++.|++.|..++...+.+.+..+. ++++..+++.+....+|..+ +|.+.
T Consensus 266 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-gp~~~ 342 (355)
T TIGR00896 266 --VAVLAVLQLVGLCGLLFAPMHGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAAL-GPLFV 342 (355)
T ss_pred --HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 234444555554444322211222345678999988888877777666654 55788899988888888885 99999
Q ss_pred HHHHhhhh
Q 017754 285 SGIYDYYA 292 (366)
Q Consensus 285 G~l~d~~~ 292 (366)
|++.|..+
T Consensus 343 G~l~~~~g 350 (355)
T TIGR00896 343 GVLHDISG 350 (355)
T ss_pred HHHHHHhc
Confidence 99999886
No 102
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.33 E-value=1.1e-12 Score=127.29 Aligned_cols=176 Identities=15% Similarity=0.189 Sum_probs=143.8
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017754 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
.++++...+....-+++...++.+.+.++.+++.. +.+.+.+...+..|+.|++.||+.||+.+ +++..+-.
T Consensus 36 ~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~------~vG~~iW~ 109 (493)
T KOG1330|consen 36 VILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI------AVGIFIWT 109 (493)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE------eeHHHHHH
Confidence 34455555666666777777888888888887665 77888888999999999999999999887 66666666
Q ss_pred HHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhh
Q 017754 217 FALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQ 295 (366)
Q Consensus 217 ~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~ 295 (366)
++.+...+ .+.+.+.+++.++|+|-+...++.+++++|.|+...|+..+++++++.++|+.+ |-++++.+.+.+.
T Consensus 110 ~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsgl-G~vvgs~va~~~~--- 185 (493)
T KOG1330|consen 110 LAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGL-GYVVGSVVASLTF--- 185 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccce-eEEeeeeeccCcc---
Confidence 66655553 445678889999999999999999999999999999999999999999999995 8777777777766
Q ss_pred hhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchH
Q 017754 296 AGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
.||++|++.+++.++.+++..++.++.++
T Consensus 186 ----------------------------~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 186 ----------------------------WWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred ----------------------------ceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 49999999999999988888777665443
No 103
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.33 E-value=6e-11 Score=118.92 Aligned_cols=159 Identities=14% Similarity=0.137 Sum_probs=109.8
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh---h-hH
Q 017754 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG---W-PG 228 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~---~-~~ 228 (366)
...+.|.+.++.|++.... ......+.+.++.+++|+++||++||+.. ..+.++++++.+++... + ..
T Consensus 290 ~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~------i~~~~~~~v~~~~l~~~~~~~~~~ 363 (479)
T PRK10077 290 VLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ------IIGALGMAIGMFSLGTAFYTQAPG 363 (479)
T ss_pred HHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH------HHhHHHHHHHHHHHHHHHhcCccc
Confidence 4456788888889876533 55567788899999999999999987654 55555666655554321 1 11
Q ss_pred -HHHHHHHHHHHHHhhhh-hhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHH------hhhhhhhhhhhh
Q 017754 229 -EIYVTTVLVGLSYGAHW-AIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY------DYYAEKQAGLLW 300 (366)
Q Consensus 229 -~l~~~~~l~G~~~g~~~-~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~------d~~~~~~~~~~~ 300 (366)
....+.++++++.+..+ +..+.+++|.+|.+.|+++.|+.+....+|..+ ++.+.+.+. |..+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~-~~~~~p~~~~~~~~~~~~~-------- 434 (479)
T PRK10077 364 IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYF-VSWTFPMMDKNSWLVAHFH-------- 434 (479)
T ss_pred HHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHH-HHHHhHHHHhccchhhhcc--------
Confidence 22233444444444323 567789999999999999999999998888886 766665444 3332
Q ss_pred hccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchH
Q 017754 301 KYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
++..|++.++++++++++.+.+.+++|+
T Consensus 435 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 435 ------------------------NGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred ------------------------CccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 6778888888878777777666666554
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.32 E-value=1.7e-10 Score=115.94 Aligned_cols=183 Identities=17% Similarity=0.230 Sum_probs=138.3
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
++++.+.++.+.+++++++..-...+++.....+.+ .+|++..+. +.-+..+.+++|.+++|++.||+|.|.. |.
T Consensus 274 ~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~--~~ 351 (477)
T PF11700_consen 274 FKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK--RT 351 (477)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh--HH
Confidence 444555677777777777765555556565666665 689998876 6667788999999999999999998722 11
Q ss_pred HHHHHHHHHHHHHHHHHH--------hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHH
Q 017754 206 VAMAVAQVVMAFALLYYA--------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~--------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
+.+.+.. ...++...+. ..+.+.+++..++.|++.|+.++..-++.+++.|+.+.+..+|+..+.....+.
T Consensus 352 l~~~l~~-~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~ 430 (477)
T PF11700_consen 352 LLISLIL-WIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSW 430 (477)
T ss_pred HHHHHHH-HHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 1112211 1122222222 445667889999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 278 i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+ ||.+.|.+.|.++ +.|..+..+.++.+++.++...+
T Consensus 431 l-GPll~g~i~~~tg-------------------------------~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 431 L-GPLLFGLITDATG-------------------------------SQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred H-HHHHHHHHHHHhC-------------------------------CchhHHHHHHHHHHHHHHHHhhc
Confidence 6 9999999999997 37888888888888877766544
No 105
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.32 E-value=1.3e-10 Score=115.38 Aligned_cols=137 Identities=15% Similarity=0.065 Sum_probs=98.4
Q ss_pred HHHHhhhhHHHHHhcHHHHHHHhC---CChhHH-----HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 144 SLVLASGSGLTVIDNLGQICQSLG---YADTSI-----YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 144 ~~~~~~~~~~~~~~~l~~i~~~~g---~s~~~~-----~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
+.++-......+....|.+.++++ .+..+. ..+...++..+|.+++|+++||+|||+.+ ..+.+++
T Consensus 30 ~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l------~~~~~~~ 103 (432)
T PRK10406 30 GNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM------LISVCMM 103 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH------HHHHHHH
Confidence 344444444455556677778874 333321 34444555668899999999999998876 6677777
Q ss_pred HHHHHHHHh-hh--------hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHH
Q 017754 216 AFALLYYAI-GW--------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 216 ~~~~~l~~~-~~--------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~ 286 (366)
+++.++.+. ++ +..+++++++.|++.|+.++...++++|.+|+++||...++.......|..+ ++.+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~-~~~~~~~ 182 (432)
T PRK10406 104 CFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL-ALLVVVV 182 (432)
T ss_pred HHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 766666543 22 2357889999999999999999999999999999999999888777777774 6655444
Q ss_pred H
Q 017754 287 I 287 (366)
Q Consensus 287 l 287 (366)
+
T Consensus 183 ~ 183 (432)
T PRK10406 183 L 183 (432)
T ss_pred H
Confidence 4
No 106
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.32 E-value=1.9e-10 Score=112.27 Aligned_cols=158 Identities=11% Similarity=-0.003 Sum_probs=115.2
Q ss_pred CCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
.++++.++++.+|.+.+..++.......+...+|.+.++.|++.... ..++..+...++.++.|++.||+++|+..
T Consensus 196 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l-- 273 (382)
T PRK11128 196 PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLL-- 273 (382)
T ss_pred chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH--
Confidence 35788999999998776666555555556667788888889886654 55666677777888888898998876554
Q ss_pred hHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHH-hhhhhhHHhhhhH
Q 017754 205 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLT-LASPAGSLIFSGV 282 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~-~~~~~G~~i~gp~ 282 (366)
..+.++.+++.+++. ..++..+++..++.|++.+...+....++.+. +.+++++..+..+ ....+|..+ ||.
T Consensus 274 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~i-g~~ 347 (382)
T PRK11128 274 ----LLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAI-MTV 347 (382)
T ss_pred ----HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHH-HHH
Confidence 556666666665555 34455667778888998887766666676775 5566788888876 445667675 999
Q ss_pred HHHHHHhhhh
Q 017754 283 IASGIYDYYA 292 (366)
Q Consensus 283 l~G~l~d~~~ 292 (366)
++|.++|..+
T Consensus 348 i~G~l~~~~g 357 (382)
T PRK11128 348 LSGFLYQHLG 357 (382)
T ss_pred HHHHHHHhcc
Confidence 9999999886
No 107
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.31 E-value=1.8e-10 Score=109.75 Aligned_cols=153 Identities=13% Similarity=0.098 Sum_probs=114.1
Q ss_pred HHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH---hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS---LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~---~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
..++++.+|+..++.++..+...++.+|++.+.++ +|++.... ..+.+..+..+||++.++++||+++|+..
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l--- 211 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL--- 211 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH---
Confidence 46678889988888888888888889999999975 47776554 78888899999999999999999876544
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHH
Q 017754 206 VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G 285 (366)
.++.++.+++.+++...+.....++.+++|++.+..++...+...+.++.+ .+++.++. ....+|+.+ .|.+.|
T Consensus 212 ---~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i-~P~l~G 285 (310)
T TIGR01272 212 ---AFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAI-VPLLQG 285 (310)
T ss_pred ---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchH-HHHHHH
Confidence 344444444443333322232344666789999999999888888888653 45566665 456688886 899999
Q ss_pred HHHhhhh
Q 017754 286 GIYDYYA 292 (366)
Q Consensus 286 ~l~d~~~ 292 (366)
.+.|..+
T Consensus 286 ~lad~~g 292 (310)
T TIGR01272 286 SLADCLG 292 (310)
T ss_pred HHHHhcc
Confidence 9999876
No 108
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.31 E-value=1.9e-11 Score=122.47 Aligned_cols=144 Identities=11% Similarity=0.096 Sum_probs=115.7
Q ss_pred HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHH
Q 017754 165 SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGL 239 (366)
Q Consensus 165 ~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~ 239 (366)
+++++.... +.+.+.++..++.+.+|+++||+|+|+.. ..+.++.+++.++... .+...+++.+++.|+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSI------GIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGL 143 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhh------HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 566766554 78888999999999999999999998766 5555555555444321 223467788999999
Q ss_pred HHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhh-hhhhhhhhhhccCCCCCcccCCCCCCc
Q 017754 240 SYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY-AEKQAGLLWKYNGNMLPVSFRDQETPT 318 (366)
Q Consensus 240 ~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (366)
+.+..++....+++|+++.++|+.+.++...+..+|..+ +|++.+++.+.. +
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i-~~~l~~~l~~~~~g-------------------------- 196 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFI-FLPISGWLCESWGG-------------------------- 196 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccCC--------------------------
Confidence 999999999999999999999999999999999999996 999999998874 5
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 319 CLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 319 c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|+..|++.++..++..++.+.+.
T Consensus 197 ------w~~~f~i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 197 ------WPMIFYVFGIVGCAWSLLWFVFP 219 (465)
T ss_pred ------CCeehhhhhHHHHHHHHHHHHHh
Confidence 99999998887766655554443
No 109
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.31 E-value=3.2e-11 Score=98.91 Aligned_cols=131 Identities=11% Similarity=0.169 Sum_probs=104.2
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHh
Q 017754 177 MISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASEL 255 (366)
Q Consensus 177 l~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~ 255 (366)
...++..++.+..|++.||++||+.. ..+..+..++.+++. ..+...+.+..++.|++.+...+.....+.|.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVL------LVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHH------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 45677888999999999999987654 445555555554444 34445667778889999998888999999999
Q ss_pred hCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHH
Q 017754 256 FGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGL 335 (366)
Q Consensus 256 f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~ 335 (366)
++.++++...++.+....+|..+ +|.+.|.+.+..+ |++.|++.+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~ 126 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLL-GPPLGGVLAQFLG--------------------------------WRAPFLFLAIL 126 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHH-hHHhHHHHhcccc--------------------------------hHHHHHHHHHH
Confidence 99999999999999999999996 9999999987765 89999888877
Q ss_pred HHHHHHHHHHH
Q 017754 336 CIIAMVMSLIV 346 (366)
Q Consensus 336 ~~~~~~~~~~~ 346 (366)
++++.+....+
T Consensus 127 ~~~~~~~~~~~ 137 (141)
T TIGR00880 127 ALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHhhc
Confidence 77766655544
No 110
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.30 E-value=3e-10 Score=111.42 Aligned_cols=156 Identities=17% Similarity=0.133 Sum_probs=107.6
Q ss_pred hhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-h
Q 017754 149 SGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-I 224 (366)
Q Consensus 149 ~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~ 224 (366)
......+..++|.+.+ ++|++.... +.+...+...++++++|+++||++||+.. ..+.+...+...... .
T Consensus 229 ~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~ 302 (393)
T PRK15011 229 WGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLM------RVAAVAGVCFYAGMLMA 302 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH------HHHHHHHHHHHHHHHHH
Confidence 3333445567887764 578887654 55566677788999999999999987543 222222222222222 2
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccC
Q 017754 225 GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNG 304 (366)
Q Consensus 225 ~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~ 304 (366)
.++..+++..++.+++.|...+..+....|.+|. ++|++.++.+....+|..+ +|.++|.++|..+
T Consensus 303 ~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~-g~~l~G~i~~~~g------------ 368 (393)
T PRK15011 303 HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWII-AGSLAGIVAEIWN------------ 368 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHH-HHHHHHHHHHHhh------------
Confidence 3344445555666666666666667778898875 5899999998888999996 9999999999876
Q ss_pred CCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017754 305 NMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 305 ~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
|+..|++.+++++++.++.+
T Consensus 369 --------------------~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 369 --------------------YHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred --------------------hHHHHHHHHHHHHHHHHHHH
Confidence 99999887777766655544
No 111
>PRK09952 shikimate transporter; Provisional
Probab=99.30 E-value=3.6e-10 Score=112.63 Aligned_cols=146 Identities=16% Similarity=0.039 Sum_probs=101.0
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHH-HHHh--CCChhHHHH------HHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQI-CQSL--GYADTSIYV------SMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i-~~~~--g~s~~~~~v------sl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
.++..++.+++-......+....|.+ .+++ +.++..... ++..++..+|.++.|+++||+|||+.+
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l----- 97 (438)
T PRK09952 23 AALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML----- 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH-----
Confidence 34444455555444444444444433 3443 455443211 233455667888899999999998766
Q ss_pred HHHHHHHHHHHHHHHHhh-hhH--------HHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHh
Q 017754 208 MAVAQVVMAFALLYYAIG-WPG--------EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 278 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~~-~~~--------~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i 278 (366)
..+.++.+++.++.+.. +.. .+++++++.|++.|+.++....+++|.+|.++||...+....+..+|..+
T Consensus 98 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l 176 (438)
T PRK09952 98 -MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLL 176 (438)
T ss_pred -HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 66777777777666533 222 46778999999999999988899999999999999999999888888885
Q ss_pred hhhHHHHHHHh
Q 017754 279 FSGVIASGIYD 289 (366)
Q Consensus 279 ~gp~l~G~l~d 289 (366)
++.+.+.+..
T Consensus 177 -~~~~~~~l~~ 186 (438)
T PRK09952 177 -STGLVSLISM 186 (438)
T ss_pred -HHHHHHHHHH
Confidence 7766666653
No 112
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.30 E-value=2.6e-10 Score=112.84 Aligned_cols=146 Identities=13% Similarity=0.001 Sum_probs=116.0
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
++++...++............+|++.+++|.+..+. ..+...++..++.+..|++.||+|||+.. ..+.+++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~------~~g~~l~ 78 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI------LLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHHHH
Confidence 555555554444443344467788889999988766 78888899999999999999999998766 7777788
Q ss_pred HHHHHHHHh----hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 216 AFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 216 ~~~~~l~~~----~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
+++.+++.. .+...+++..++.|+|.|...+...+++.+..++++++...++.+....+|+.+ ||.+++.+...
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~-g~~i~~~l~~~ 156 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSII-GMVVAQQLILS 156 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc
Confidence 877766532 234566778889999999998888889999998899999999999999999996 99999888643
No 113
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.30 E-value=2.1e-10 Score=112.49 Aligned_cols=179 Identities=11% Similarity=0.111 Sum_probs=127.7
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHh----CCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL----GYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFA 201 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~----g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~ 201 (366)
+.++.++++++|.+.+..++..........+.+.+.++. +.+.... ..++..+...++.+..|++.||+++|+.
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~ 286 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA 286 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 467788999888766555444433334445667776654 3333222 5666777788889999999999998765
Q ss_pred CchhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHH-HHhhhhhhHHhh
Q 017754 202 YPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNF-LTLASPAGSLIF 279 (366)
Q Consensus 202 ~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~-~~~~~~~G~~i~ 279 (366)
. .++.++.+++..++. ..++..+++..++.|++.............+.++.+.+++.++. .+....+|+.+
T Consensus 287 l------~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~- 359 (396)
T TIGR00882 287 L------LIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIF- 359 (396)
T ss_pred H------HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHH-
Confidence 5 565666666555544 34555666777778887766555556677888888888887766 56788899996
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017754 280 SGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 280 gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
+|.++|++.|..| |+.+|++.+++.++..+....
T Consensus 360 ~~~l~G~l~~~~G--------------------------------~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 360 LSTLAGNMYDSIG--------------------------------FQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHhHHHHHHhcc--------------------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887 999999988887776665543
No 114
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.29 E-value=1.3e-10 Score=112.18 Aligned_cols=165 Identities=13% Similarity=-0.002 Sum_probs=114.7
Q ss_pred HHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHH
Q 017754 146 VLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYY 222 (366)
Q Consensus 146 ~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~ 222 (366)
++...........+|.+. +++|.+.... ..+...+...+..++.|+++||+|||+.+ +..+.++..++.++.
T Consensus 7 ~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~-----~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 7 FLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGL-----ILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH-----HHHHHHHHHHHHHHH
Confidence 333333344455666654 6789887765 67788888899999999999999986643 133344444444444
Q ss_pred Hh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhH--HHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhh
Q 017754 223 AI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGAL--YNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLL 299 (366)
Q Consensus 223 ~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~--~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~ 299 (366)
+. .+...+++..++.|.+.+...+...+...|..+.+.++.. .+.......+|..+ ||.++|++.+..+
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i-g~~~~~~l~~~~~------- 153 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVI-GPPLAFWLALGFG------- 153 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHH-hhhHHHHHHHhcc-------
Confidence 43 3444566666777766666667667777888876666543 57777888899986 9999999988766
Q ss_pred hhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 300 WKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|++.|++.++++++..+..+.+.+
T Consensus 154 -------------------------~~~~f~~~~~~~~~~~~~~~~~~~ 177 (375)
T TIGR00899 154 -------------------------FTVMFLTAALAFVLCGVLVWLFLP 177 (375)
T ss_pred -------------------------cHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999988877776666555443
No 115
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.29 E-value=1.5e-10 Score=110.67 Aligned_cols=156 Identities=15% Similarity=0.091 Sum_probs=117.4
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHH-hcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVI-DNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~-~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+++.++++.+|.+.+..++......... .+.|.+.++ +|++.... ..+...++..+++++.|+++||++||+..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-- 280 (365)
T TIGR00900 203 IKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM-- 280 (365)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH--
Confidence 4455677777776665555554444444 677888776 78876654 67778888999999999999999876543
Q ss_pred hHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 205 PVAMAVAQVVMAFALLYYAIGW--PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+..+.+++.+++.... ...+++..++.|++.+...+...+++.|.+|++++|+.+++.+....+|..+ +|.
T Consensus 281 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-g~~ 355 (365)
T TIGR00900 281 ----TGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPL-GLI 355 (365)
T ss_pred ----HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 444444555544444322 4455677788899988888888899999999999999999999999999996 999
Q ss_pred HHHHHHhhh
Q 017754 283 IASGIYDYY 291 (366)
Q Consensus 283 l~G~l~d~~ 291 (366)
++|++.|..
T Consensus 356 ~~g~l~~~~ 364 (365)
T TIGR00900 356 LAGPLADHL 364 (365)
T ss_pred HHHHHHHHc
Confidence 999999875
No 116
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.29 E-value=5e-11 Score=109.19 Aligned_cols=151 Identities=17% Similarity=0.095 Sum_probs=119.4
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHH
Q 017754 135 KADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
.|.||++....++.+....-++..-|.+. +.+|+|..++ ..+.....+.+..++.|.++|++|++.. +.+.+
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~-----wv~~a 337 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLW-----WVASA 337 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceeh-----hHHHH
Confidence 46799998888887777666666555554 4589988765 8888888889999999999999998654 34666
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhh
Q 017754 212 QVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 212 ~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~ 291 (366)
.+....++..+.++. ..-|+...+.|+.+...-...|..++-+.|.+..|++||++....++|-.+ .|+++|++.|..
T Consensus 338 ~~~tl~~H~~l~Ft~-lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~-i~Iiag~i~d~~ 415 (459)
T KOG4686|consen 338 CILTLLGHSGLFFTF-LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAF-IPIIAGFIADGD 415 (459)
T ss_pred HHHHHHHhhhHHhhh-ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhH-HhhhhheeecCC
Confidence 677777777766432 223567778888877766667888888898899999999999999999996 899999999987
Q ss_pred h
Q 017754 292 A 292 (366)
Q Consensus 292 ~ 292 (366)
+
T Consensus 416 g 416 (459)
T KOG4686|consen 416 G 416 (459)
T ss_pred C
Confidence 6
No 117
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.29 E-value=1.1e-10 Score=114.36 Aligned_cols=170 Identities=15% Similarity=0.118 Sum_probs=117.8
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHH
Q 017754 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
+|++|.+...+++.......+..++|.+.+ ++|++..+. ..++..+...++++.+|+++||+|||+.+ ..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~------~~~ 74 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHL------LWI 74 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHH
Confidence 578999888888877777777778887765 479988776 89999999999999999999999998765 222
Q ss_pred HHHHHHH---HHHHHhh------hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 212 QVVMAFA---LLYYAIG------WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 212 ~~~~~~~---~~l~~~~------~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
.+..+++ ...+... ......+..++.|++.+...+....++.+.- ++.+..+|.......+|..+ ||.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~-g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWAL-CAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHH-HHH
Confidence 2222211 1111111 1112344456677777766666666666642 33456777777888899996 999
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 283 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 283 l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
++|.+.+. + |+..|++.++++++.+++.+..
T Consensus 152 ~~g~l~~~-~--------------------------------~~~~f~~~~~~~~~~~~~~~~~ 182 (396)
T TIGR00882 152 IAGILFSI-D--------------------------------PQIVFWLGSGFALILMLLLMFA 182 (396)
T ss_pred HHhhhhcc-C--------------------------------chHHHHHHHHHHHHHHHHHHHh
Confidence 99988753 4 8999998888777766555443
No 118
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.28 E-value=9.1e-11 Score=116.00 Aligned_cols=173 Identities=14% Similarity=0.088 Sum_probs=112.2
Q ss_pred HhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017754 132 ALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
.++++++|.+.+.+++.......+...+|.+.++ +|++..++ ..+...+...++++++|+++||+|||+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~------ 79 (420)
T PRK09528 6 YLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHL------ 79 (420)
T ss_pred hhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH------
Confidence 4567889998888887777666677777777766 89998776 89999999999999999999999997654
Q ss_pred HHHHHHHHHHHH---HHHhhhh--HHH----HHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhh
Q 017754 209 AVAQVVMAFALL---YYAIGWP--GEI----YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 209 ~~~~~~~~~~~~---l~~~~~~--~~l----~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
.++..+.+++.. ....... ... +++.++.|.+.....+....+..+ + .+++|..+|.......+|..+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i- 156 (420)
T PRK09528 80 LWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWAL- 156 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHH-
Confidence 222222222211 1111100 011 112222333332322333333322 2 345677888888888999996
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 280 SGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 280 gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+|.++|.+++. + |+..|++.+++++++.++.+..
T Consensus 157 ~~~~~g~l~~~-~--------------------------------~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 157 CAFIAGILFNI-N--------------------------------PQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHHHHHHHHhc-C--------------------------------chHhHHHHHHHHHHHHHHHhcc
Confidence 99999999864 3 8888988877776665555444
No 119
>PRK15075 citrate-proton symporter; Provisional
Probab=99.28 E-value=2.8e-10 Score=113.15 Aligned_cols=155 Identities=12% Similarity=0.073 Sum_probs=99.1
Q ss_pred HHhhhhhHHHHHH-HHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 131 QALMKADFLLLFF-SLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 131 ~~l~~~~~~ll~~-~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
...++++.|...+ ..++..........++|.+.++ +|++..+. ...+..+++.++++++|+++||++||+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~---- 307 (434)
T PRK15075 232 SLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVL---- 307 (434)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----
Confidence 3345555554432 2233333445567789998876 79987655 55667788899999999999999987543
Q ss_pred HHHHHHHHHHH-HHHH--HHhhh--hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHh-hhhhhHHhhh
Q 017754 207 AMAVAQVVMAF-ALLY--YAIGW--PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL-ASPAGSLIFS 280 (366)
Q Consensus 207 ~~~~~~~~~~~-~~~l--~~~~~--~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~-~~~~G~~i~g 280 (366)
..+.++..+ +... ..... ........++.+++.+...+..+.+++|.+|.+.|++..++.+. +..+++.+ +
T Consensus 308 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~-~ 384 (434)
T PRK15075 308 --IAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGF-T 384 (434)
T ss_pred --HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhh-H
Confidence 222222111 1111 11111 12233334555667776666677889999999999999998644 44445664 8
Q ss_pred hHHHHHHHhhhh
Q 017754 281 GVIASGIYDYYA 292 (366)
Q Consensus 281 p~l~G~l~d~~~ 292 (366)
|.+.|++.|..+
T Consensus 385 p~~~g~i~~~~g 396 (434)
T PRK15075 385 PAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHhcC
Confidence 999999999876
No 120
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.27 E-value=3.1e-10 Score=110.83 Aligned_cols=177 Identities=18% Similarity=0.113 Sum_probs=112.6
Q ss_pred HHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
.+.++++.+|.++...++..........+++.+. +..|++.... +.++..++..+++++.|+++||+++|+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~---- 268 (382)
T PRK10091 193 FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIA---- 268 (382)
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHH----
Confidence 3566788888876665554433333334445444 4578887655 77888999999999999999999886554
Q ss_pred HHHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHhhhhhhHH-HHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 207 AMAVAQVVMAFALLYYA--IGWPGEIYVTTVLVGLSYGAHWAIVP-AAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~G~~~g~~~~~~~-~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
..+..+++++.+++. ..+.....+..++.+++.++..+... ....+..+.+.++... .+....+|..+ ||.+
T Consensus 269 --~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~-Gp~~ 343 (382)
T PRK10091 269 --AVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAI-GAYC 343 (382)
T ss_pred --HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHH-HHHH
Confidence 445555555554432 22233334444455555443333223 3444555555566543 35567889996 9999
Q ss_pred HHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 284 ASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 284 ~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+|+++|.++ +|+..+.+.+++++++......+
T Consensus 344 ~G~l~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 375 (382)
T PRK10091 344 GGMMLTLGL-------------------------------AYNYVALPAALLSFAAMSSLLLY 375 (382)
T ss_pred hHHHHHccc-------------------------------CcchHHHHHHHHHHHHHHHHHHH
Confidence 999999764 29999988887776665554443
No 121
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.27 E-value=5.9e-10 Score=112.88 Aligned_cols=170 Identities=13% Similarity=0.065 Sum_probs=124.3
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhh-----hhhccCchhHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAI-----VRKFAYPRPVAMAV 210 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~-----grr~~~~R~~~~~~ 210 (366)
+.+.++...+............+|.+.++.|.+..++ ..+..... .++++++|+++||+ |||+ .++..
T Consensus 13 ~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr-----~~ll~ 86 (491)
T PRK11010 13 NSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRRR-----GWLLA 86 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCch-----HHHHH
Confidence 3444444444444444456677888999999987776 44444433 36899999999999 6543 34566
Q ss_pred HHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHH
Q 017754 211 AQVVMAFALLYYAIG----WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 211 ~~~~~~~~~~l~~~~----~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~ 286 (366)
+++.++++...++.. +...+++..++.+++.+...+...++++|+++.++|+.+.++..++..+|..+ ++.+.++
T Consensus 87 ~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll-g~~l~~~ 165 (491)
T PRK11010 87 TQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV-SGGLALW 165 (491)
T ss_pred HHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 666666665554422 23356667778888888888888999999999999999999999999999996 8999999
Q ss_pred HHhh-hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017754 287 IYDY-YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 287 l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
+.+. .+ ||..|++.+++.+++.+..+.
T Consensus 166 l~~~~~G--------------------------------Wr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 166 LADRYLG--------------------------------WQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHhcccC--------------------------------HHHHHHHHHHHHHHHHHHHHh
Confidence 9874 34 999999999877776555444
No 122
>PTZ00207 hypothetical protein; Provisional
Probab=99.26 E-value=4.7e-10 Score=114.98 Aligned_cols=155 Identities=10% Similarity=0.064 Sum_probs=114.4
Q ss_pred HHHHHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh-----
Q 017754 152 GLTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG----- 225 (366)
Q Consensus 152 ~~~~~~~l~~i~~~~g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~----- 225 (366)
.+.+....+++.+++|++..+. .++..+....++.+..|+++||+|+|+.+ .++.++.+++.++.+..
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vl------lig~ll~~iG~ll~ala~~~~i 116 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIF------VLSMTVFCLGTLLFALTFQEVI 116 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHHHHHHHHHHHHHHHHhcccc
Confidence 3455556788889999998765 22222233334566789999999988766 77778888887776643
Q ss_pred --hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhcc
Q 017754 226 --WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYN 303 (366)
Q Consensus 226 --~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~ 303 (366)
+...+++..++.|+|.+..++....++.++|| ++||.+.|+......+|+.+++++..+++. .+
T Consensus 117 ~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~----------- 182 (591)
T PTZ00207 117 EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DN----------- 182 (591)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh-----------
Confidence 44567788888999988777777788899995 789999999999999999876666666553 22
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 304 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 304 ~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
|+..|++++++.++.+++.+.+.
T Consensus 183 ---------------------~~~~fl~l~vl~~vv~ll~~~~v 205 (591)
T PTZ00207 183 ---------------------TSAYFFFLMSFALVVGILAIVFM 205 (591)
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHHHhhe
Confidence 77788888877777666665554
No 123
>TIGR00895 2A0115 benzoate transport.
Probab=99.26 E-value=9.2e-11 Score=113.55 Aligned_cols=144 Identities=11% Similarity=0.106 Sum_probs=107.0
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
.++.+++.+++..........++|.+.+++|++.... ..++..++..+++++.|+++||+++|... ....+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~ 324 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTA------LLLLLG 324 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH------HHHHHH
Confidence 3445555555555555566678888888889886654 77888889999999999999999886211 222222
Q ss_pred HHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHH
Q 017754 215 MAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 215 ~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l 287 (366)
.....++.. ..+....++..++.|++.+...+...+.++|.+|.+++|+++|+.+....+|..+ ||.++|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~-g~~~~G~l 397 (398)
T TIGR00895 325 AVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAII-GPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHhHHhc
Confidence 222222222 3344556777788899999889999999999999999999999999999999996 99999976
No 124
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.26 E-value=1.5e-10 Score=116.65 Aligned_cols=132 Identities=13% Similarity=0.161 Sum_probs=95.1
Q ss_pred HHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhh--
Q 017754 154 TVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWP-- 227 (366)
Q Consensus 154 ~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~-- 227 (366)
....++|.+.+ ++|++..++ ..+...++..+|+++.|+++||++||+.+ .++.++..++.+++. ..+.
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 366 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY------VCSLLISQLLIIPVFAIGGANV 366 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH------HHHHHHHHHHHHHHhhccccHH
Confidence 45567898885 789987665 78888899999999999999999987544 333333333333222 2111
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
..+.+..++.++...+..+..+++++|.+|.+.+|+.+++.+....+|+.+ ||.++|.+.|..+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~l-gp~l~g~l~~~~g 430 (496)
T PRK03893 367 WVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGAL-APILGALIAQRLD 430 (496)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHH-HHHHHHHHhccCC
Confidence 222233333333333445677888999999999999999999999999996 9999999999877
No 125
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.25 E-value=1.1e-09 Score=110.98 Aligned_cols=179 Identities=12% Similarity=0.118 Sum_probs=118.6
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HH-HHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YV-SMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~v-sl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+++.++++.+|.+.+..++..........+.+++. +.+|++..+. .. .+..++..+|.+++|+++||+++|+..
T Consensus 215 l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l-- 292 (491)
T PRK11010 215 LRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRAL-- 292 (491)
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--
Confidence 45566666677655444433333333344555554 5689988776 33 344578889999999999999986533
Q ss_pred hHHHHHHHHHHHH---HHHHHHhh--hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhh
Q 017754 205 PVAMAVAQVVMAF---ALLYYAIG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 205 ~~~~~~~~~~~~~---~~~l~~~~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
.++.++.++ .+.++... +...+....++..++.|...+...+...++.+.+..++.+++.+....+|..+
T Consensus 293 ----~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~- 367 (491)
T PRK11010 293 ----MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVY- 367 (491)
T ss_pred ----HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH-
Confidence 222222222 22222222 22223334444444555555666778889998888999999999999999986
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 280 SGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 280 gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
++.+.|+++|..| |+..|.+.+++++.+.++...+
T Consensus 368 ~~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 368 VGPVAGWFVEAHG--------------------------------WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHhC--------------------------------hHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999877 9999998888888877666554
No 126
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.25 E-value=4.4e-10 Score=109.32 Aligned_cols=132 Identities=17% Similarity=0.241 Sum_probs=97.9
Q ss_pred HHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHH-HHHHhh-hhH
Q 017754 154 TVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFAL-LYYAIG-WPG 228 (366)
Q Consensus 154 ~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~-~l~~~~-~~~ 228 (366)
....++|.+.+ ++|++..+. ..+...++..+|+++.|+++||++||+.. .++.++..+.. .++... +..
T Consensus 256 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 329 (405)
T TIGR00891 256 PIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAY------VCSLLAGQLLIIPVFAIGANVA 329 (405)
T ss_pred hhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhh------HHHHHHHHHHHHHHHHhCCchH
Confidence 44556777664 578887665 67788899999999999999999987655 33333332222 222222 223
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 229 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 229 ~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
.+.+..++.+++.++.++..++.++|.+|++++|+.+|+.+....+|+.+ +|+++|++.|+.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-g~~~~g~l~~~~g 392 (405)
T TIGR00891 330 VLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGAL-APIIGALLAQRLD 392 (405)
T ss_pred HHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHH-HHHHHHHHHHhcc
Confidence 34444466677777777888899999999999999999999999999996 9999999999877
No 127
>PRK10504 putative transporter; Provisional
Probab=99.24 E-value=7e-10 Score=111.18 Aligned_cols=155 Identities=10% Similarity=0.023 Sum_probs=114.5
Q ss_pred HHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017754 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
+.++++.++......++............|++.+. +|++.... ......++..++.+++|+++||+++|+..
T Consensus 256 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~----- 330 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL----- 330 (471)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH-----
Confidence 57888988887777776665555566678888874 78877655 55556666777889999999999987654
Q ss_pred HHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 208 MAVAQVVMAFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~----~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
..+.++++++.+++.. .+...+.+..++.|++.+..++.....+.+.++.+.+|.++++.++...+|..+ |+.+
T Consensus 331 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i-g~~i 408 (471)
T PRK10504 331 -VATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSI-GVTI 408 (471)
T ss_pred -HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHH-HHHH
Confidence 4445544444444332 112223345566778877777788888889999999999999999999999996 9999
Q ss_pred HHHHHhhhh
Q 017754 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
+|.+.+..+
T Consensus 409 ~g~ll~~~g 417 (471)
T PRK10504 409 AGLLLGLFG 417 (471)
T ss_pred HHHHHHHhh
Confidence 999998876
No 128
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.24 E-value=7.7e-10 Score=107.36 Aligned_cols=179 Identities=17% Similarity=0.239 Sum_probs=132.1
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+..+.+|+|..|..++..++.....++...++.++.++ .|++.+.. ..-.++++.++|.+++|+++|| +.|+..
T Consensus 203 ~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l-- 279 (394)
T COG2814 203 TLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRAL-- 279 (394)
T ss_pred HHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHH--
Confidence 47788999999999988888888777766666666665 68877665 7888899999999999999999 554433
Q ss_pred hHHHHHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 205 PVAMAVAQVVMAFALLYYA--IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
.....++++..+.+. ..++....+..++.|+..+..........++ ..++....+.++...+.++|..+ |..
T Consensus 280 ----~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~-GA~ 353 (394)
T COG2814 280 ----IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIAL-GAA 353 (394)
T ss_pred ----HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHH-HHH
Confidence 344444444444443 2333344445555666655554445555566 55788999999999999999996 999
Q ss_pred HHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 283 IASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 283 l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
++|.++|+.+ |....++.+.+.+++.++.++..
T Consensus 354 lGG~v~~~~g--------------------------------~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 354 LGGLVLDALG--------------------------------YAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHhhc--------------------------------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999976 99999998888888777765543
No 129
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.23 E-value=2.4e-10 Score=110.18 Aligned_cols=131 Identities=13% Similarity=0.146 Sum_probs=104.9
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 017754 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIY 231 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~ 231 (366)
.+...+|.+.+++|++..+. ..++..++..++.+..|+++||+|||+.. ..+.++..++.+.....+...++
T Consensus 18 ~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~------~~~~~~~~~~~~~~~~~~~~~l~ 91 (355)
T TIGR00896 18 SVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSV------AAGLLLIAAGILIRSAPGTALLF 91 (355)
T ss_pred cCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHH------HHHHHHHHHHHHHHHhccHHHHH
Confidence 34567899999999998776 78899999999999999999999998765 44555555554444334556677
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 232 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 232 ~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+.+++.|++.+...+..+..+.|.++ ++++.+.++.+....+|..+ ++.+.+.+.+..+
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i-~~~~~~~l~~~~~ 150 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAAL-AAAATVPLAQHSG 150 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhhh
Confidence 78888999988877777888889885 68999999999999999996 8999998877653
No 130
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.23 E-value=6.9e-10 Score=112.51 Aligned_cols=109 Identities=17% Similarity=0.211 Sum_probs=90.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hh------hHHHHHHHHHHHHHHhhhhh
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GW------PGEIYVTTVLVGLSYGAHWA 246 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~------~~~l~~~~~l~G~~~g~~~~ 246 (366)
..+...++..+|.+++|+++||+|||+.. .++.+++.++.++.+. .+ ...+++++++.|++.|..++
T Consensus 61 ~~~~~~ig~~ig~~~~g~l~d~~Grr~~~------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 134 (502)
T TIGR00887 61 VNGSASIGTLAGQLFFGWLADKLGRKRVY------GMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYP 134 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHH------HHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhH
Confidence 78888899999999999999999998766 5555555555544442 22 34678899999999999999
Q ss_pred hHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHh
Q 017754 247 IVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 247 ~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d 289 (366)
..+.+++|.+|+++||.+.++......+|..+ ++.+...+..
T Consensus 135 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~-g~~~~~~~~~ 176 (502)
T TIGR00887 135 LSAIITSEFATKKWRGAMMAAVFAMQGFGILA-GAIVALIVLA 176 (502)
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 99999999999999999999999999999985 8888776654
No 131
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.23 E-value=7e-10 Score=109.76 Aligned_cols=162 Identities=10% Similarity=0.067 Sum_probs=127.3
Q ss_pred HHhcHHHHHHHhCCChhH-H--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hhhHHH
Q 017754 155 VIDNLGQICQSLGYADTS-I--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEI 230 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~~~-~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~~~l 230 (366)
.....|++.+++|++..+ . ..+.+..+..+..+.+|+++||+|-|+.+ .++.+.-++..++.+. .+...+
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL------~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL------VLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 334567788899999888 4 88888899999999999999999987765 5555555555555553 355678
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcc
Q 017754 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVS 310 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~ 310 (366)
.+..++.|++-|+.+ ....++...||+++|+++.++.+.+..+|.++ ++++++++. ..+.+
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~I-a~~L~qll~-s~gWr---------------- 179 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFL-SSVLGQLLV-TLGWI---------------- 179 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-hcCch----------------
Confidence 899999999999998 88889999999999999999999999999996 899998843 34411
Q ss_pred cCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchHHH
Q 017754 311 FRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVY 354 (366)
Q Consensus 311 ~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~ 354 (366)
.|+...++..+...+++++++++....|..|
T Consensus 180 -------------~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~ 210 (511)
T TIGR00806 180 -------------SYSTLNIISLVFMTFSVFLALFLKRPKRSLF 210 (511)
T ss_pred -------------hHHHHHHHHHHHHHHHHHHHHhCCCCchhhh
Confidence 2666677777777777777777765555433
No 132
>PRK15075 citrate-proton symporter; Provisional
Probab=99.22 E-value=5.3e-10 Score=111.20 Aligned_cols=144 Identities=14% Similarity=0.073 Sum_probs=106.8
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH---HHHHH-----HHHHhhhhhhhhhhhhhhhhhccCchhHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI---YVSMI-----SIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 209 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~---~vsl~-----~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~ 209 (366)
.-.++++.++.......+....|++.++++.++.+. ..+.. .+...+|.++.|+++||+|||+.+ .
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l------~ 90 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL------I 90 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH------H
Confidence 344556667777777778888999999998766442 22222 222246788899999999998766 5
Q ss_pred HHHHHHHHHHHHHHhh-hhH--------HHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhh
Q 017754 210 VAQVVMAFALLYYAIG-WPG--------EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFS 280 (366)
Q Consensus 210 ~~~~~~~~~~~l~~~~-~~~--------~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~g 280 (366)
.+.++++++.++.+.. +.. .+++++++.|++.|..++....+++|++|+++|+...++......+|..+ +
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~-g 169 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF-A 169 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH-H
Confidence 6666666666665532 222 35778999999999888888899999999999999999998888888875 7
Q ss_pred hHHHHHHH
Q 017754 281 GVIASGIY 288 (366)
Q Consensus 281 p~l~G~l~ 288 (366)
+.+++.+.
T Consensus 170 ~~~g~~l~ 177 (434)
T PRK15075 170 ALLGYLLN 177 (434)
T ss_pred HHHHHHHH
Confidence 77776664
No 133
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.22 E-value=6.7e-11 Score=123.16 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=111.3
Q ss_pred HHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhh----
Q 017754 153 LTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW---- 226 (366)
Q Consensus 153 ~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~---- 226 (366)
..+...++++-+++++++.+. +.+.+.++..++.++.|++.||++||+.+ .++.++++++.++++.++
T Consensus 50 g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i------~~g~ll~~lg~ll~alphf~~~ 123 (633)
T TIGR00805 50 GLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI------GIGCAIMGLGSFLLSLPHFLSG 123 (633)
T ss_pred HHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE------EecHHHHHHHHHHHhChHHhcC
Confidence 344556788888999987776 88899999999999999999999998877 677777777777665331
Q ss_pred ------------------------------------------------hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCC
Q 017754 227 ------------------------------------------------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGL 258 (366)
Q Consensus 227 ------------------------------------------------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~ 258 (366)
...+++++++.|+|.+..+++..+++.|.+++
T Consensus 124 ~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~ 203 (633)
T TIGR00805 124 RYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKS 203 (633)
T ss_pred CccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCc
Confidence 12456789999999999999999999999999
Q ss_pred CchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhh
Q 017754 259 KSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 259 ~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~ 291 (366)
++++...++.+....+|..+ |+.++|++.+..
T Consensus 204 ~~~~~~~~i~~~~~~iG~~l-G~llgg~l~~~~ 235 (633)
T TIGR00805 204 KNSPLYIGILESIAVFGPAF-GYLLGSFCLQIY 235 (633)
T ss_pred cccHHHHHHHHHHHHhhhHH-HHHHHHHHHhcc
Confidence 99999999999999999996 999999988654
No 134
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.21 E-value=1.2e-09 Score=103.68 Aligned_cols=181 Identities=13% Similarity=0.054 Sum_probs=131.7
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+-...++++.-|.+.+.+.+.....+..+.|+|+|..+.|+|..+. .+++..+......++.-.+.+|...+ |+
T Consensus 200 ~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~----r~ 275 (395)
T COG2807 200 SVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ----RP 275 (395)
T ss_pred cccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc----ch
Confidence 3455789999998888888888888999999999999999998876 89999999999999999998884332 22
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCc-hhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 206 VAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS-FGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~-~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
.. .....++.+|...+........+...++.|+|.|+.+++.-..+.+-....+ .+...|+....+.+=+.+ ||.+.
T Consensus 276 ~~-~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~-GP~l~ 353 (395)
T COG2807 276 LV-VLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAF-GPWLF 353 (395)
T ss_pred HH-HHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhh-hhhhH
Confidence 22 3333344444433332222222223588999999999998888887765443 566667766666666664 99999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017754 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
|++.|.++ +|+..++..+.+.++..+..+.
T Consensus 354 G~lhDa~g-------------------------------sw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 354 GFLHDATG-------------------------------SWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred hHHHHhcC-------------------------------ChHHHHHHHHHHHHHHHHHHhh
Confidence 99999998 5999988777666655554433
No 135
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.21 E-value=3.4e-10 Score=125.54 Aligned_cols=159 Identities=9% Similarity=0.047 Sum_probs=108.0
Q ss_pred HHhhhhhHHHHHHHHHHhhhhHHHHHhcHH-----HHHHHhCCChhHH---HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017754 131 QALMKADFLLLFFSLVLASGSGLTVIDNLG-----QICQSLGYADTSI---YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~-----~i~~~~g~s~~~~---~vsl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
..+++++|+.++++.+++..........++ ++..+.+.+.... ..+++.+...+..+++|+++||++||+.+
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHH
Confidence 355666777666666555444322222211 1112222222221 45566777888999999999999998754
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 203 PRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
.. ...+..+++..+.+.+...+.+.+++++++.|++.+..++...+++.++++.+.++.+.++.+++..+|..+ ||.
T Consensus 86 ~~--~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~i-gp~ 162 (1140)
T PRK06814 86 KI--LKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILL-GTI 162 (1140)
T ss_pred HH--HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHH-HHH
Confidence 11 111222222222222233566788899999999999989999999999999999999999999999999996 999
Q ss_pred HHHHHHhhhh
Q 017754 283 IASGIYDYYA 292 (366)
Q Consensus 283 l~G~l~d~~~ 292 (366)
++|++.+..+
T Consensus 163 l~g~l~~~~~ 172 (1140)
T PRK06814 163 IGGLATISGN 172 (1140)
T ss_pred HHHHHHhccc
Confidence 9999998766
No 136
>PRK10133 L-fucose transporter; Provisional
Probab=99.20 E-value=1.4e-09 Score=108.55 Aligned_cols=145 Identities=14% Similarity=0.033 Sum_probs=115.3
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
.++++++.++............+|++.+++|.+..+. ..+.+.++..++.+..|+++||+|||+.. ..+.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l------~~g~~~ 100 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI------ITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH------HHHHHH
Confidence 4566666666666666666777899988999988776 78888999999999999999999998776 777777
Q ss_pred HHHHHHHHH----hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHH
Q 017754 215 MAFALLYYA----IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 215 ~~~~~~l~~----~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~ 288 (366)
++++.+++. ..+...+++++++.|+|.|...+.....+.+..+.++++...++......+|..+ +|.+++.+.
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~-g~~~g~~l~ 177 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAII-AVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 777776642 2345577889999999999999988888888766666666789999999999996 888877654
No 137
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.19 E-value=3e-09 Score=104.60 Aligned_cols=157 Identities=8% Similarity=0.030 Sum_probs=106.3
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcH-HHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNL-GQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l-~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+.++.++++.+|...+..++..........++ |.+.+++|++.... ..+...+++.+|+++.|++.||.+++
T Consensus 208 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~----- 282 (394)
T PRK10213 208 NTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL----- 282 (394)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-----
Confidence 35678889999987666555544444444454 66777789887654 56777788888888888888874322
Q ss_pred hHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 205 PVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
.......+..+.++++.. ..+...+++..++.|++++...+...+.+.+..+ ++.+...+.......+|..+ ||.+
T Consensus 283 -~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~-G~~l 359 (394)
T PRK10213 283 -ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTC-GAAI 359 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHH-HHHH
Confidence 112222232333333322 2344556667778898888877777777777775 55667777777777888886 9999
Q ss_pred HHHHHhhhh
Q 017754 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
+|+++|..+
T Consensus 360 ~G~l~~~~g 368 (394)
T PRK10213 360 GGYALDNIG 368 (394)
T ss_pred HHHHHhccC
Confidence 999999876
No 138
>TIGR00898 2A0119 cation transport protein.
Probab=99.19 E-value=1.5e-10 Score=117.14 Aligned_cols=145 Identities=17% Similarity=0.131 Sum_probs=115.3
Q ss_pred cHHHHHHHhCCC---hhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHH
Q 017754 158 NLGQICQSLGYA---DTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIY 231 (366)
Q Consensus 158 ~l~~i~~~~g~s---~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~ 231 (366)
..+.+.++++.+ .... ..+++.++..+|.++.|+++||+|||+.+ .++.++.+++.++.+ ..+...++
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~------~~~~~~~~i~~~~~~~~~~~~~~~ 184 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL------LLSTLVTAVSGVLTAFSPNYTVFL 184 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH------HHHHHHHHHHHHHHHHcccHHHHH
Confidence 456777888886 4433 88899999999999999999999998655 556666666665554 34566788
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCccc
Q 017754 232 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSF 311 (366)
Q Consensus 232 ~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~ 311 (366)
+.+++.|++.++.++...++++|+++.++|+...++..++..+|..+ +|.+++.+. .
T Consensus 185 ~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~~~---~------------------- 241 (505)
T TIGR00898 185 VFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVL-LPLVAYFIP---D------------------- 241 (505)
T ss_pred HHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHH-HHHHHHHhh---H-------------------
Confidence 88999999999999999999999999999999999998888888885 777765542 2
Q ss_pred CCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017754 312 RDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 312 ~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
||+.|++.++.+++..+..+
T Consensus 242 -------------wr~~~~~~~i~~~~~~~~~~ 261 (505)
T TIGR00898 242 -------------WRWLQLAVSLPTFLFFLLSW 261 (505)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHH
Confidence 89999988877776665553
No 139
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.18 E-value=2.3e-09 Score=105.17 Aligned_cols=176 Identities=11% Similarity=0.031 Sum_probs=110.3
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHhcHHHH-HHHhCCChhHH--HHHHHHH-HHhhhhhhhhhhhhhhhhhccCchhHHHHH
Q 017754 135 KADFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYADTSI--YVSMISI-WNFLGRVGGGYFSEAIVRKFAYPRPVAMAV 210 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i-~~~~g~s~~~~--~vsl~~i-~~~~g~~~~G~lsD~~grr~~~~R~~~~~~ 210 (366)
|...|.+++..++.......+...+|.+ .+++|.+.++. .++...+ ...++.+.+|+ +||+|||+.. +..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~-----~~~ 87 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSL-----IVF 87 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHH-----HHH
Confidence 3446666666666655555555666665 46789988776 3444445 44455555666 9999987643 233
Q ss_pred HHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCch--hhHHHHHHhhhhhhHHhhhhHHHHHH
Q 017754 211 AQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF--GALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 211 ~~~~~~~~~~l~~~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~--g~~~g~~~~~~~~G~~i~gp~l~G~l 287 (366)
+.++.+++..+++.. +...+++...+.+...+...+....++.+..+.+.+ +...++.+++.++|..+ ||.++|++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~-g~~i~~~l 166 (393)
T PRK15011 88 CCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVI-GPPLAYAL 166 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH-hhHHHHHH
Confidence 334444444444432 333333343344333344556666677776665544 33447888889999996 99999999
Q ss_pred HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 288 YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 288 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
.+..+ |+..|++.++.+++.++..+...++
T Consensus 167 ~~~~g--------------------------------w~~~f~~~~~~~~~~~~~~~~~~~~ 196 (393)
T PRK15011 167 AMGFS--------------------------------FTVMYLSAAVAFIVCGVMVWLFLPS 196 (393)
T ss_pred HHhcC--------------------------------hHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 98876 9999999888777766655554443
No 140
>PRK10054 putative transporter; Provisional
Probab=99.18 E-value=4.8e-10 Score=110.22 Aligned_cols=156 Identities=9% Similarity=-0.050 Sum_probs=105.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH---hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS---LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~---~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
.++.++++.+|.+.+..++.......+..+.+.+... .+.+.... +.+...+.....++..|+++||.++|+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l- 277 (395)
T PRK10054 199 PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLM- 277 (395)
T ss_pred hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHH-
Confidence 3567788888877766666555444444556666543 23333222 44444445555667778888988776543
Q ss_pred hhHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 204 RPVAMAVAQVVMAFALLYYAI--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
..+.++++++.+.+.. .+...+.+..++.|+|.+...+...+.+.+..|++.+|+.++..+ ...+|..+ ||
T Consensus 278 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~-Gp 350 (395)
T PRK10054 278 -----TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAI-NP 350 (395)
T ss_pred -----HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHH-HH
Confidence 5556666666655543 233345566778888887777777788889999899999988765 45578886 99
Q ss_pred HHHHHHHhhhh
Q 017754 282 VIASGIYDYYA 292 (366)
Q Consensus 282 ~l~G~l~d~~~ 292 (366)
.++|+++|+.+
T Consensus 351 ~~~G~l~~~~g 361 (395)
T PRK10054 351 LVSGVILTTLP 361 (395)
T ss_pred HHHHHHHHHcC
Confidence 99999999987
No 141
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.17 E-value=3.4e-10 Score=111.51 Aligned_cols=170 Identities=21% Similarity=0.303 Sum_probs=131.4
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHH-HH----hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQIC-QS----LGYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMA 209 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~-~~----~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~ 209 (366)
+|.++..-++=-++.+++-..+-.+. .+ +|++++++ ..+.+...-.+..+++||++||+ |+|+.. .
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI------~ 96 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI------V 96 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH------H
Confidence 55555544444444443333333332 23 45887766 77778778888899999999997 887776 8
Q ss_pred HHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCc--hhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 210 VAQVVMAFALLYYAIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKS--FGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 210 ~~~~~~~~~~~l~~~~---~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~--~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
++.+++.+|+++++.. .+..++++.++.++|.|..=+....+++|+++++. |-..+++.+++.++|+++ +|++.
T Consensus 97 lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~-~p~i~ 175 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLI-APIIT 175 (498)
T ss_pred HHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHH-HHHHH
Confidence 8999999999999854 46688999999999999998998999999999764 777889999999999996 99999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+++.+..+ |..+|.+.++-..++.+..+..
T Consensus 176 ~~~~~~~g--------------------------------~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 176 GLLAINYG--------------------------------WHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred HHHHHhhC--------------------------------HHHHHHHHHHHHHHHHHHHHHc
Confidence 99999887 9999988877666666554443
No 142
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.17 E-value=1.5e-09 Score=106.15 Aligned_cols=147 Identities=16% Similarity=0.147 Sum_probs=104.7
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHH
Q 017754 139 LLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMA 216 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~ 216 (366)
|.+.+.+++.......+...+|.+.+++|++..++ ..+...+...++.+++|+++||++|+... +... .++..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~-~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIA-LRLL-ALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH-HHHH-HHHHHHHH
Confidence 43445555555554556778999999999998877 78888999999999999999999875332 1111 11221222
Q ss_pred HHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 217 FALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 217 ~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+ .+.. ..+.+.+++..++.|.+.+...+...+++.+ + .++++..+|.......+|..+ +|+++|++.+..+
T Consensus 85 ~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~-~-~~~~~~~~g~~~~~~slG~~~-g~~l~g~l~~~~g 156 (382)
T TIGR00902 85 A--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANT-W-QKQFGLDYGKVRLIGSAAFII-GSALFGGLIGMFD 156 (382)
T ss_pred H--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHH-H-HHHcCCCccHHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 1 1222 3345566677777888777767776666654 3 577899999999999999996 9999999999887
No 143
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.17 E-value=1.2e-10 Score=111.38 Aligned_cols=139 Identities=16% Similarity=0.170 Sum_probs=124.4
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHhhhhhhHHHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW-PGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
+.+...+.+.+..++.|.+.||+|+|..+ .+++.+|....+++++.+ ...+++++.+.|+|....++...+++
T Consensus 111 LFaskA~~qllvnp~~G~l~~~iGy~ipm------~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglaml 184 (464)
T KOG3764|consen 111 LFASKALVQLLVNPFFGNLIDRIGYKIPM------VAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAML 184 (464)
T ss_pred HHHHHHHHHHHhcccchhhHHHhccccHH------HHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHH
Confidence 77788889999999999999999987665 899999999999998654 45788999999999999999999999
Q ss_pred HHhhCCCc-hhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHH
Q 017754 253 SELFGLKS-FGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGI 331 (366)
Q Consensus 253 se~f~~~~-~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i 331 (366)
+|.|+.++ ||.+.|+......+|..+ ||+.+|.+||..| ++..|.+
T Consensus 185 Ad~f~~d~er~~vmGialgfislG~lv-gPpfGGilYe~~G--------------------------------k~aPFlV 231 (464)
T KOG3764|consen 185 ADVFPEDNERGSVMGIALGFISLGVLV-GPPFGGILYEFAG--------------------------------KSAPFLV 231 (464)
T ss_pred HHHcccchhhhHHHHHHHHHHhcccee-cCCcccchHhhcC--------------------------------CcCcHHH
Confidence 99999886 799999999999999997 9999999999988 8999999
Q ss_pred HHHHHHHHHHHHHHHhhhch
Q 017754 332 MAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~r 351 (366)
+++++++...+.+++...++
T Consensus 232 L~~v~Lld~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 232 LAIVLLLDGALQLLVIEPTE 251 (464)
T ss_pred HHHHHHHHHHHHHheeCccc
Confidence 99999998888887766544
No 144
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.16 E-value=1.1e-09 Score=121.26 Aligned_cols=152 Identities=14% Similarity=0.136 Sum_probs=109.8
Q ss_pred HhhhhhHHHHHHHHHHhhhhHHHHHh-cHHHHHHHhCCChhHH----HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 132 ALMKADFLLLFFSLVLASGSGLTVID-NLGQICQSLGYADTSI----YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 132 ~l~~~~~~ll~~~~~~~~~~~~~~~~-~l~~i~~~~g~s~~~~----~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
.+++..|+.++++.++.......+.. ..+.+..+++.+.... ..+++.+...++.+++|+++||+|||+.+
T Consensus 5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l---- 80 (1146)
T PRK08633 5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVI---- 80 (1146)
T ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHH----
Confidence 45667787777666665444333322 2333445566554332 56777888889999999999999998765
Q ss_pred HHHHHHHHHHHHHHH---H-HhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 207 AMAVAQVVMAFALLY---Y-AIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l---~-~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+.++.++..++ . ...+...+++++++.|++.+...+...++++|+++.++++.+.++..++..+|..+ ||.
T Consensus 81 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~l-g~~ 157 (1146)
T PRK08633 81 --RIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILA-GTA 157 (1146)
T ss_pred --HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHH-HHH
Confidence 3333222222221 1 12345677888899999999988999999999999999999999999999999996 999
Q ss_pred HHHHHHhh
Q 017754 283 IASGIYDY 290 (366)
Q Consensus 283 l~G~l~d~ 290 (366)
++|++.+.
T Consensus 158 l~~~l~~~ 165 (1146)
T PRK08633 158 LFSFLFES 165 (1146)
T ss_pred HHHHHHHh
Confidence 99999876
No 145
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.16 E-value=2.8e-09 Score=104.72 Aligned_cols=156 Identities=13% Similarity=-0.106 Sum_probs=107.7
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++.++++.+|...+..++............|.+. +.+|++..+. ......++..+|+++.|+++||+++|+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~--- 284 (406)
T PRK15402 208 YKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLI--- 284 (406)
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH---
Confidence 45667888888877666555444444555567765 4578887654 34455667888999999999999887654
Q ss_pred HHHHHHHHHHHHHHHHHHh------hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhh
Q 017754 206 VAMAVAQVVMAFALLYYAI------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~------~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
.++.++++++.+++.. .+...+++..++.|++.+...+........ -.++++|+..+..++...+|..+
T Consensus 285 ---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~- 359 (406)
T PRK15402 285 ---RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTV- 359 (406)
T ss_pred ---HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHH-
Confidence 4455555555444332 122345566777888887766655444333 33478999999999999999985
Q ss_pred hhHHHHHHHhhhh
Q 017754 280 SGVIASGIYDYYA 292 (366)
Q Consensus 280 gp~l~G~l~d~~~ 292 (366)
|+.+.|++++..+
T Consensus 360 g~~~~~~l~~~~~ 372 (406)
T PRK15402 360 GIELSKHAYLGGG 372 (406)
T ss_pred HHHHHHhcccCCc
Confidence 9999999998876
No 146
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.15 E-value=2.6e-09 Score=105.09 Aligned_cols=152 Identities=17% Similarity=0.113 Sum_probs=113.0
Q ss_pred HHHHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhh-----hhhccCchhHHHHHHHHHHHHHHHHHHhh-
Q 017754 153 LTVIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAI-----VRKFAYPRPVAMAVAQVVMAFALLYYAIG- 225 (366)
Q Consensus 153 ~~~~~~l~~i~~~~g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~-----grr~~~~R~~~~~~~~~~~~~~~~l~~~~- 225 (366)
......+|.+.++.|++.+++ .++....- .+..+++|+++||+ |||+. ++.++.++++++...+...
T Consensus 16 ~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~-----~l~~~~~~~~l~~~~l~~~~ 89 (402)
T PRK11902 16 ALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRG-----WLLLTQVGLAASIAAMAFCP 89 (402)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchh-----HHHHHHHHHHHHHHHHHhcC
Confidence 345567899999999999887 44444433 68899999999999 66432 3455566665555554432
Q ss_pred ---hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhh-hhhhhhhhhh
Q 017754 226 ---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY-AEKQAGLLWK 301 (366)
Q Consensus 226 ---~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~-~~~~~~~~~~ 301 (366)
+...+++..++.+++.+...+...++++|.+++++|+.+.++..++..+|..+ ++.+++.+.+.. +
T Consensus 90 ~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~-g~~l~~~l~~~~~g--------- 159 (402)
T PRK11902 90 PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLV-SGGLALWLADRVLG--------- 159 (402)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHH-HhHHHHHHHhcccC---------
Confidence 12334555556677777777888899999999999999999999999999996 888899888754 4
Q ss_pred ccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 017754 302 YNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 343 (366)
Q Consensus 302 ~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~ 343 (366)
|+..|++.+++.+++.+..
T Consensus 160 -----------------------w~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 160 -----------------------WGNTYLLMAGLMLAGALTT 178 (402)
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHH
Confidence 9999999888776655543
No 147
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.14 E-value=3.2e-09 Score=104.62 Aligned_cols=158 Identities=10% Similarity=0.096 Sum_probs=102.1
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhh-hhhhccCch
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEA-IVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~-~grr~~~~R 204 (366)
++++.++++.++.+.+..+...........++|.+.++.+.++... ..++..+....+....++..|+ ++.++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~--- 276 (400)
T PRK11646 200 GMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHR--- 276 (400)
T ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH---
Confidence 4567778888876555443333323334567888888866554433 3444444444444334444443 332221
Q ss_pred hHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 205 PVAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
+..+.++.+++.+++.. .+...+.+..++.+++.+...+...+.+.+..|++.+|+.+|+.+....+|..+ ||.+
T Consensus 277 ---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~i-g~~l 352 (400)
T PRK11646 277 ---LMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAI-GYIG 352 (400)
T ss_pred ---HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHh-cccc
Confidence 24455555555555443 333344455566777777777777889999999999999999999999999996 9999
Q ss_pred HHHHHhhhh
Q 017754 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
+|+++|..+
T Consensus 353 ~G~l~~~~~ 361 (400)
T PRK11646 353 GGWLFDLGK 361 (400)
T ss_pred hHHHHHHHh
Confidence 999999875
No 148
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.14 E-value=2.9e-09 Score=102.62 Aligned_cols=166 Identities=15% Similarity=0.057 Sum_probs=112.9
Q ss_pred HHhcHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh----hhHH
Q 017754 155 VIDNLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG----WPGE 229 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~----~~~~ 229 (366)
+...+|.+.+++|++.++. ..+...+...+ .+++|+++||+..|+.-+|+.++..+.++.++..+.+... +...
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 3456888999999998876 44433333333 8999999999843221223344456666666554444422 2223
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCc
Q 017754 230 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 309 (366)
Q Consensus 230 l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~ 309 (366)
++...++.+++.+...+...++++|++++++|+.+.++...+..+|..+ ++.+++.+.+..+..+
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~-~~~l~~~l~~~~g~~~-------------- 150 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLL-SGSLALVLASPEFANT-------------- 150 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHH-HHHHHHHHhhhccccc--------------
Confidence 4445556677777777778889999999999999999999999999996 8999998887654110
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 310 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 310 ~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.....|+..|++.+++.+++.+..+++
T Consensus 151 ----------~~~~~wr~~f~i~ai~~l~~~~~~~~~ 177 (356)
T TIGR00901 151 ----------GLITLWGYIFFWTALLILPGLLVTLFL 177 (356)
T ss_pred ----------ccccccHHHHHHHHHHHHHHHHHHHHh
Confidence 012249999998887776655554433
No 149
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.14 E-value=1.6e-09 Score=105.78 Aligned_cols=133 Identities=14% Similarity=0.130 Sum_probs=97.0
Q ss_pred HHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHH
Q 017754 153 LTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGE 229 (366)
Q Consensus 153 ~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~ 229 (366)
..+...+|.+.+++|.+..++ .+++..+...++.+++|+++||++|+....|.. .. ...+... .... ..+.+.
T Consensus 21 g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~-~~-~~~~~~~--~~~~~~~~~~~ 96 (382)
T PRK11128 21 GVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLL-AL-LTLLFAV--AFWFGAHSFWL 96 (382)
T ss_pred HHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHH-HH-HHHHHHH--HHHHhcccHHH
Confidence 446677889999999988776 888899999999999999999999854332221 11 1111111 1122 234556
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 230 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 230 l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+++..++.|++.+...+...+++.+. .++++..++...+...+|..+ ||+++|++.++.+
T Consensus 97 l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~i-gp~lgg~l~~~~g 156 (382)
T PRK11128 97 LFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVI-GSALTGKLVSWFG 156 (382)
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 66777888888887777777666665 456788888888888999996 9999999999887
No 150
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.11 E-value=1.4e-08 Score=99.92 Aligned_cols=176 Identities=13% Similarity=0.141 Sum_probs=104.6
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHH-HHhcHHHHHHHhCCChhHH--HHHHHH-HHHhhhhhhhhhhhhhhhhhccCc
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLT-VIDNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~-~~~~l~~i~~~~g~s~~~~--~vsl~~-i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
++++.++++.+|.+++..++....... .....+.+.+++|++.... ..+..+ ++..+|.+++|+++||+++|+..
T Consensus 201 ~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l- 279 (402)
T PRK11902 201 PLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL- 279 (402)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH-
Confidence 356678888888766554444332222 2233444556689987665 333333 45788999999999999986543
Q ss_pred hhHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHH----HHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHH
Q 017754 204 RPVAMAVAQVVMAFALLYYAI--GWPGEIYVTTV----LVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~~--~~~~~l~~~~~----l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
........+..+.+.++.. .+...++.+.+ +.|++.+...+....++.+.++.+. ++..+....+|..
T Consensus 280 --~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~ 353 (402)
T PRK11902 280 --MLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRV 353 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHH
Confidence 1111122222222222232 22233333333 3445555556666667777766554 4555555567777
Q ss_pred hhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHH
Q 017754 278 IFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMS 343 (366)
Q Consensus 278 i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~ 343 (366)
+ ++.++|.++|..| |+..|.+.+++++++.++.
T Consensus 354 ~-~~~~~G~l~~~~G--------------------------------~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 354 Y-VGPTSGYLVEAYG--------------------------------WPGFYLMTVVIALPGLALL 386 (402)
T ss_pred H-HHHHHHHHHHHhC--------------------------------hHHHHHHHHHHHHHHHHHH
Confidence 5 5668999999987 9999988887777765543
No 151
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.11 E-value=6.7e-09 Score=104.59 Aligned_cols=156 Identities=10% Similarity=0.060 Sum_probs=103.2
Q ss_pred HHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017754 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
+..++|+.++.+++..++............+++.+....+.... +.++..+...++.+++++++||+|+|+.+
T Consensus 225 ~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~----- 299 (473)
T PRK10429 225 ALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW----- 299 (473)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH-----
Confidence 34557777777666665555444444344444444432222222 45555678888999999999999987665
Q ss_pred HHHHHHHHHHHHHHHH------hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHh-------hCCCchhhHHHHHHhhhhh
Q 017754 208 MAVAQVVMAFALLYYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASEL-------FGLKSFGALYNFLTLASPA 274 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~-------f~~~~~g~~~g~~~~~~~~ 274 (366)
.++.++.+++.+.+. ..+...+++..++.|++.+..++..+++++|. .|.+..|..++...+..-+
T Consensus 300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~ 378 (473)
T PRK10429 300 -AGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG 378 (473)
T ss_pred -HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH
Confidence 333333333322211 12233455666778889888888889999988 3456678899999999999
Q ss_pred hHHhhhhHHHHHHHhhhh
Q 017754 275 GSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 275 G~~i~gp~l~G~l~d~~~ 292 (366)
|..+ ++.+.|++.+..|
T Consensus 379 ~~al-~~~i~g~~l~~~G 395 (473)
T PRK10429 379 GSAF-AAFFIGVVLGLIG 395 (473)
T ss_pred HHHH-HHHHHHHHHHHcC
Confidence 9996 9999999998765
No 152
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.11 E-value=2e-09 Score=108.31 Aligned_cols=138 Identities=11% Similarity=0.015 Sum_probs=94.1
Q ss_pred CCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017754 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
..+++++++|..|.+.++++|.....+++.+|+|.+.++ .|++..++ +...+.++++++.+++|++|||+.. ....
T Consensus 264 ~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~-~~~~ 342 (495)
T KOG2533|consen 264 KGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKT-IFAR 342 (495)
T ss_pred HHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhh-hHHH
Confidence 457789999999999999999999999999999999998 56887766 7788889999999999999999530 0001
Q ss_pred hhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHH
Q 017754 204 RPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALY 265 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~ 265 (366)
|..+.....+...+++..+. .......+.+.+...++.+...+.....+++......+....
T Consensus 343 ~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~ 405 (495)
T KOG2533|consen 343 RLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTT 405 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHH
Confidence 22333444555555644443 322344444444444445555555666666666555444333
No 153
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.10 E-value=4e-09 Score=117.11 Aligned_cols=156 Identities=13% Similarity=0.065 Sum_probs=115.8
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
++.+.+++.+|.+.+.+++.......+..++|.+.++ +|.+.... +.+.+.++..+|.++.|+++|+..+++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~--- 294 (1140)
T PRK06814 218 LKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYV--- 294 (1140)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeee---
Confidence 4556678888888877777666666677788988866 68876554 78888899999999999999877665433
Q ss_pred HHHHHHHHHHHHHHHHHHh---------------------hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhH
Q 017754 206 VAMAVAQVVMAFALLYYAI---------------------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGAL 264 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~---------------------~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~ 264 (366)
..+.++++++.+.+.. .+.+.++++.+++|++.+...+...+++.+.++.+.+|.+
T Consensus 295 ---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v 371 (1140)
T PRK06814 295 ---PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARV 371 (1140)
T ss_pred ---hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceee
Confidence 1222222222111111 3334556677888999888888889999999999999999
Q ss_pred HHHHHhhhhhhHHhhhhHHHHHHHhhh
Q 017754 265 YNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 265 ~g~~~~~~~~G~~i~gp~l~G~l~d~~ 291 (366)
+|+.++...+|..+ +++++|.+++..
T Consensus 372 ~g~~~~~~~~~~~i-g~~~~g~l~~~~ 397 (1140)
T PRK06814 372 IAANNVLNAAFMVA-GTIILALLQALG 397 (1140)
T ss_pred eHHHHHHHHHHHHH-HHHHHHHHHHhc
Confidence 99999999999986 899999998654
No 154
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.10 E-value=5.3e-09 Score=103.48 Aligned_cols=156 Identities=10% Similarity=-0.036 Sum_probs=110.6
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCC--ChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGY--ADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~--s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
++++.++++.++...++.++..+......++++.+.++.+. +.... +.+.......+||+++|++.||+++|+..
T Consensus 224 ~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l- 302 (410)
T TIGR00885 224 SLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL- 302 (410)
T ss_pred hHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-
Confidence 34577888999888877777777766777888888876543 32222 56666677889999999999999876543
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 204 RPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
.+..++.++.+++..........++.++.|++.+..|+...+...+..+.+......++.+. .+|+.+ .|.+
T Consensus 303 -----~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~-~p~l 374 (410)
T TIGR00885 303 -----MAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGI-VPPL 374 (410)
T ss_pred -----HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--Hhccch-HHHH
Confidence 44444444444444433333345667788888889999999999999986654444444443 388886 7999
Q ss_pred HHHHHhhhh
Q 017754 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
.|++.|..+
T Consensus 375 ~G~~~d~~~ 383 (410)
T TIGR00885 375 QGFIIDMKE 383 (410)
T ss_pred HHHHHHHhc
Confidence 999999753
No 155
>PRK10133 L-fucose transporter; Provisional
Probab=99.09 E-value=5.6e-09 Score=104.21 Aligned_cols=155 Identities=12% Similarity=0.075 Sum_probs=109.7
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHH-H-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-Q-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
.++.++++.+|...+..++..+.......+++.+. + .+|++.... ....+.++.++|++.+|+++||+++|+..
T Consensus 251 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l-- 328 (438)
T PRK10133 251 LSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL-- 328 (438)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--
Confidence 45778899888776666666666555666777664 4 468887765 78888999999999999999999987654
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 205 PVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
..+.++.++++++.........+....+.|+|.+..++...+...+.+|. +.+.+.++..+. .+|+.+ +|.+.
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~~~-~~g~~~-~~~i~ 401 (438)
T PRK10133 329 ----AAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIVMT-IIGGGI-VTPVM 401 (438)
T ss_pred ----HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHhHH-hccchH-HHHHH
Confidence 33333333333332221112234566788999999999999988888865 466777776643 467775 78999
Q ss_pred HHHHhhhh
Q 017754 285 SGIYDYYA 292 (366)
Q Consensus 285 G~l~d~~~ 292 (366)
|++.|..+
T Consensus 402 G~l~~~~g 409 (438)
T PRK10133 402 GFVSDAAG 409 (438)
T ss_pred HHHHHhcc
Confidence 99998765
No 156
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.08 E-value=7e-09 Score=105.52 Aligned_cols=155 Identities=14% Similarity=0.145 Sum_probs=115.0
Q ss_pred HHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHH
Q 017754 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAM 208 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~ 208 (366)
..++++.|..+|++.+....+.......++-+..++.-|.... ......+-.++..+++|.+.||+.||+.+
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrril------ 78 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRIL------ 78 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHH------
Confidence 3468888888888887776666655555666665554343322 33333445567888999999999988766
Q ss_pred HHHHHHHHHHHHHHH------hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 209 AVAQVVMAFALLYYA------IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~------~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+.++.++..++++ ..+++.+++..++.|++.....+...++++|+.+.++...+.++..+..++...+ ||.
T Consensus 79 i~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i-GPa 157 (524)
T PF05977_consen 79 ILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII-GPA 157 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc-cch
Confidence 555544443322221 2345677888899999988888999999999999999999999999999999996 999
Q ss_pred HHHHHHhhhh
Q 017754 283 IASGIYDYYA 292 (366)
Q Consensus 283 l~G~l~d~~~ 292 (366)
++|.++...|
T Consensus 158 lgG~Lva~~G 167 (524)
T PF05977_consen 158 LGGILVAFFG 167 (524)
T ss_pred HHHHHHHHHH
Confidence 9999998887
No 157
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.07 E-value=1.1e-08 Score=113.48 Aligned_cols=154 Identities=15% Similarity=0.080 Sum_probs=112.7
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChh-HH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADT-SI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~-~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
++..++++.+|.+.+..++.......+..++|.+.+ .+|++.. .. +.++..++.++|.+++|+++||+++++..
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~-- 302 (1146)
T PRK08633 225 LKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLV-- 302 (1146)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccch--
Confidence 445667777887766666655555556667777765 4788766 43 67777888889999999999999876554
Q ss_pred hHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 205 PVAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
.++.++++++.+++.. .+...++++.+++|++.+...+...+++.+.++.+.+|+++++.++...+|..+ ++.+
T Consensus 303 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~-~~~~ 377 (1146)
T PRK08633 303 ----PLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLL-FLAL 377 (1146)
T ss_pred ----hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHH-HHHH
Confidence 4455555555555442 344455677788899888888888889999999999999999999999998875 6666
Q ss_pred HHHHHh
Q 017754 284 ASGIYD 289 (366)
Q Consensus 284 ~G~l~d 289 (366)
++.+..
T Consensus 378 ~~~l~~ 383 (1146)
T PRK08633 378 TTLFSG 383 (1146)
T ss_pred HHHHHH
Confidence 665543
No 158
>PRK09669 putative symporter YagG; Provisional
Probab=99.07 E-value=8.3e-09 Score=102.93 Aligned_cols=157 Identities=14% Similarity=0.093 Sum_probs=103.6
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHh-CCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL-GYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~-g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
+++.++++.+|.+++..++.............++.+.. +...... +.....+...++.+++++++||+|+|+..
T Consensus 222 ~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~---- 297 (444)
T PRK09669 222 LKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAF---- 297 (444)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----
Confidence 55678899988877666554433332222233333322 2222222 44445567778889999999999987655
Q ss_pred HHHHHHHHHHH-HHHHHH--hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhh-------CCCchhhHHHHHHhhhhhhH
Q 017754 207 AMAVAQVVMAF-ALLYYA--IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELF-------GLKSFGALYNFLTLASPAGS 276 (366)
Q Consensus 207 ~~~~~~~~~~~-~~~l~~--~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f-------~~~~~g~~~g~~~~~~~~G~ 276 (366)
..+.++.++ +..++. ..+...+++..++.|++.+...++.+++++|.. |.+..|..++..+....+|.
T Consensus 298 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~ 375 (444)
T PRK09669 298 --KWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGL 375 (444)
T ss_pred --HHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHH
Confidence 333333322 221222 223445566777889999999999999999887 34556888899999999999
Q ss_pred HhhhhHHHHHHHhhhh
Q 017754 277 LIFSGVIASGIYDYYA 292 (366)
Q Consensus 277 ~i~gp~l~G~l~d~~~ 292 (366)
.+ |+.++|.+.|..|
T Consensus 376 al-g~~i~g~ll~~~G 390 (444)
T PRK09669 376 AI-GGAVVGWILAWVD 390 (444)
T ss_pred HH-HHHHHHHHHHHcC
Confidence 96 9999999999875
No 159
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.06 E-value=1.5e-09 Score=110.57 Aligned_cols=127 Identities=14% Similarity=0.012 Sum_probs=108.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
..+++.++..+|.+++|++||++|||+.+ ..++++..++.+..+ ..+...+++.+++.|++.++.......++
T Consensus 123 ~~s~~~~G~~vG~~i~g~lsD~~GRk~~~------~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 123 GQSLFFLGVLVGSLIFGPLSDRFGRKPVL------LVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HHHHHHHHHHHHHhhheehHhhcccHHHH------HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 78888999999999999999999998877 677777776666655 45667889999999999999999999999
Q ss_pred HHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHH
Q 017754 253 SELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIM 332 (366)
Q Consensus 253 se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~ 332 (366)
+|++++++|+.+..+ ......++.+ ++.+++++.. + ||+.+++.
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~~~~~-~~~~~a~~~~--~--------------------------------Wr~~~~~~ 240 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFVGGLM-LPAGAAYITR--D--------------------------------WRWLFWII 240 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHHHHHH-HHHHHHHHHh--h--------------------------------HHHHHHHH
Confidence 999999999999999 7777777775 7888888876 3 99999998
Q ss_pred HHHHHHHHHH
Q 017754 333 AGLCIIAMVM 342 (366)
Q Consensus 333 ~~~~~~~~~~ 342 (366)
...+++..+.
T Consensus 241 ~~~~~~~~~~ 250 (521)
T KOG0255|consen 241 SIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHH
Confidence 8888776666
No 160
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.06 E-value=4.5e-09 Score=101.64 Aligned_cols=180 Identities=18% Similarity=0.234 Sum_probs=133.9
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
++++.+..+...+.++.+...-...+.......+.. ++|++..+. +....++..++|.+++|++.||++-|...
T Consensus 245 ~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl--- 321 (438)
T COG2270 245 FKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVL--- 321 (438)
T ss_pred HHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceee---
Confidence 455555555666666655554433445555555666 789998887 66677888999999999999999988655
Q ss_pred HHHHHHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 206 VAMAVAQVVMAFALLY-YAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l-~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
.++.++..+..+. +....+....++..++|++.|+..+..=++.+++.|+++-+..+|+.++.+..++.+ ||.+.
T Consensus 322 ---~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~-gp~lv 397 (438)
T COG2270 322 ---MIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFL-GPFLV 397 (438)
T ss_pred ---hHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHH-HHHHH
Confidence 4444444433333 333345566777789999999999999999999999999999999999999999995 99999
Q ss_pred HHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 285 SGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 285 G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+.+.|.++ +-|..+..+.++..++.++.+.+
T Consensus 398 ~v~t~iTg-------------------------------~~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 398 AVITQITG-------------------------------SSRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred HHHHHHhc-------------------------------chhhHHHHHHHHHHhhHhhEEee
Confidence 99999998 36777777776666666554443
No 161
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.06 E-value=1.7e-08 Score=99.45 Aligned_cols=159 Identities=19% Similarity=0.195 Sum_probs=111.2
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhC-CChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLG-YADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g-~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
+..+.+|+|+++++++..++.......+.++.+.+.++.| ++.... ..++-.+...+.-...+++..|+|.|+.
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l--- 275 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWL--- 275 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH---
Confidence 3457899999988777777766666667777888899988 665443 3444444455554555555555554433
Q ss_pred hHHHHHHHHHHHHHHHHHHhh-hh-HHHHHH----HHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHh-hhhhhHH
Q 017754 205 PVAMAVAQVVMAFALLYYAIG-WP-GEIYVT----TVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL-ASPAGSL 277 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~-~~-~~l~~~----~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~-~~~~G~~ 277 (366)
+.++.+..++=..+++.. ++ ...++. -.+.|+++|..+.....++.+..|++.++++.++.+. ...+|..
T Consensus 276 ---l~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~ 352 (400)
T PF03825_consen 276 ---LLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGA 352 (400)
T ss_pred ---HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHH
Confidence 355666655555555533 23 222222 2458999999999899999999999999999999876 4678999
Q ss_pred hhhhHHHHHHHhhhhh
Q 017754 278 IFSGVIASGIYDYYAE 293 (366)
Q Consensus 278 i~gp~l~G~l~d~~~~ 293 (366)
+ |..++|+++|+.+.
T Consensus 353 i-G~~igG~l~~~~g~ 367 (400)
T PF03825_consen 353 I-GSLIGGWLYDAFGA 367 (400)
T ss_pred H-HHHHHHHHHHHhcc
Confidence 6 99999999999873
No 162
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.05 E-value=6.1e-09 Score=104.35 Aligned_cols=155 Identities=12% Similarity=0.094 Sum_probs=119.2
Q ss_pred HHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
.+.++++.++...+..++..........++|++.++ +|++..+. ......++..+++++.|+++||++||+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~---- 324 (485)
T TIGR00711 249 LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV---- 324 (485)
T ss_pred HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH----
Confidence 457788888887777666666666667788988876 68887665 66677888999999999999999886544
Q ss_pred HHHHHHHHHHHHHHHHHh----h-hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 207 AMAVAQVVMAFALLYYAI----G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~----~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
.++..+++++.+++.. . +...+++..++.|++.+..++.....+.+.+|++++|.+.++.+....+|+.+ |+
T Consensus 325 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~i-g~ 401 (485)
T TIGR00711 325 --TIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSI-GT 401 (485)
T ss_pred --HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHH-HH
Confidence 5566666666655441 1 22345556778889888877666677778889999999999999999999996 99
Q ss_pred HHHHHHHhhh
Q 017754 282 VIASGIYDYY 291 (366)
Q Consensus 282 ~l~G~l~d~~ 291 (366)
.+.|.++++.
T Consensus 402 ~i~g~~~~~~ 411 (485)
T TIGR00711 402 ALITTILTNR 411 (485)
T ss_pred HHHHHHHHHH
Confidence 9999998854
No 163
>PRK09848 glucuronide transporter; Provisional
Probab=99.05 E-value=8.6e-09 Score=102.89 Aligned_cols=157 Identities=12% Similarity=0.074 Sum_probs=110.0
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH-HHHHH-HHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI-YVSMI-SIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~-~vsl~-~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++.++++.++.+.+..++............|++.++ +|.+.... +.... .+...++.+++++++||+++|+.+
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~--- 297 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF--- 297 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---
Confidence 4567889999887777666665555555556666554 56554333 22222 455677889999999999887655
Q ss_pred HHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCC-------CchhhHHHHHHhhhhhh
Q 017754 206 VAMAVAQVVMAFALLYYAIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGL-------KSFGALYNFLTLASPAG 275 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~~---~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-------~~~g~~~g~~~~~~~~G 275 (366)
.++.++.+++.+++... +...+++..++.|+|.+...+...++.+|..+. +..|..+++.++...+|
T Consensus 298 ---~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 298 ---LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred ---HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 55556656655554421 223445566778888888888888888877643 45699999999999999
Q ss_pred HHhhhhHHHHHHHhhhh
Q 017754 276 SLIFSGVIASGIYDYYA 292 (366)
Q Consensus 276 ~~i~gp~l~G~l~d~~~ 292 (366)
..+ |+.+.|.+.+..|
T Consensus 375 ~ai-g~~i~g~~l~~~G 390 (448)
T PRK09848 375 QAI-GGSIPAFILGLSG 390 (448)
T ss_pred HHH-HHHHHHHHHHHcC
Confidence 996 9999999987754
No 164
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.03 E-value=2.9e-08 Score=99.19 Aligned_cols=190 Identities=16% Similarity=0.101 Sum_probs=122.5
Q ss_pred CCCCHHHHhhhhh----HHHHHHHHHHhhhhHH-HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhh
Q 017754 125 EDFTLPQALMKAD----FLLLFFSLVLASGSGL-TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIV 197 (366)
Q Consensus 125 ~~~~~~~~l~~~~----~~ll~~~~~~~~~~~~-~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~g 197 (366)
++.+++|.++++. .++.+...++...++. ....+.-.+.++.|++...+ .....++.+.+..+++.++.||+|
T Consensus 254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~g 333 (485)
T KOG0569|consen 254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLG 333 (485)
T ss_pred cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5567888887753 2333333444444443 33334445778889887755 677778889999999999999999
Q ss_pred hhccCchhHHHHHHHHHHHHHHHHHH-------hhhhHHH---HHHHHHHHHHHhh-hhhhHHHHHHHhhCCCchhhHHH
Q 017754 198 RKFAYPRPVAMAVAQVVMAFALLYYA-------IGWPGEI---YVTTVLVGLSYGA-HWAIVPAAASELFGLKSFGALYN 266 (366)
Q Consensus 198 rr~~~~R~~~~~~~~~~~~~~~~l~~-------~~~~~~l---~~~~~l~G~~~g~-~~~~~~~~~se~f~~~~~g~~~g 266 (366)
||+.. ..+..++++..+++. ...++.. +++.+++.++++. .-++.+-+.+|+|+.+.|+.+..
T Consensus 334 RRpLl------l~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s 407 (485)
T KOG0569|consen 334 RRPLL------LISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQS 407 (485)
T ss_pred CcHHH------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHH
Confidence 97655 333333333333322 1112222 2333334433332 24666779999999999999999
Q ss_pred HHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 267 FLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 267 ~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+....+-+..++ -+..+-.+++..| ...|.+..+.+++..+..+..
T Consensus 408 ~~~~~~w~~~fi-v~~~fp~l~~~~g---------------------------------~~~filF~i~~~~~~i~~~~~ 453 (485)
T KOG0569|consen 408 VATAVNWLSNFI-VGFAFPPLQNVIG---------------------------------PYVFILFVIPLAIFLIYLYRY 453 (485)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhc---------------------------------chhhHHHHHHHHHHHHHHHHh
Confidence 999988888886 3455555555554 145677777788878888888
Q ss_pred hhhchHHH
Q 017754 347 VHRTKSVY 354 (366)
Q Consensus 347 ~~~~r~~~ 354 (366)
.++||.+.
T Consensus 454 lPETkgr~ 461 (485)
T KOG0569|consen 454 LPETKGRT 461 (485)
T ss_pred CcccCCCC
Confidence 88888544
No 165
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.03 E-value=1.5e-07 Score=92.27 Aligned_cols=182 Identities=15% Similarity=0.098 Sum_probs=129.5
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCCh----hHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYAD----TSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~----~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
..+.+|+++||.+.+...........+..-.+.+.+.+--+. ... ..++-.+..++.-.+..++-+|+|.|+..
T Consensus 213 ~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~L 292 (412)
T PF01306_consen 213 VLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLL 292 (412)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHH
Confidence 457789999998765544333333344444555555543222 222 56666677777788888899999988766
Q ss_pred chhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHH-HhhhhhhHHhhh
Q 017754 203 PRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFL-TLASPAGSLIFS 280 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~-~~~~~~G~~i~g 280 (366)
.++.+++++=..+.+ .+++..+.+.-.+-|+-.+.......-++++.|+.|..++.|.+. +.+..+|..+ .
T Consensus 293 ------llag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i-~ 365 (412)
T PF01306_consen 293 ------LLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIII-L 365 (412)
T ss_dssp ------HHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHH-H
T ss_pred ------HHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHH-H
Confidence 666666776666666 456667777778888887777777777999999999999999985 6788899987 5
Q ss_pred hHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 281 GVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 281 p~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
+.++|++||+.| |+.+|++++++.+...+++.+..++
T Consensus 366 s~~~G~lyd~~G--------------------------------~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 366 SPLAGYLYDRIG--------------------------------FQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred hhhHHhhHhhcC--------------------------------cHHHHHHHHHHHHHHHHHheeeecC
Confidence 788999999998 9999999998887777777666544
No 166
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.02 E-value=2.5e-08 Score=96.51 Aligned_cols=151 Identities=16% Similarity=0.077 Sum_probs=100.9
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++.++++.+|...+...+.......+..+.|.+.+ .+|++.... ..+...++..+++++.|+++||+++|+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~--- 275 (385)
T TIGR00710 199 FLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLL--- 275 (385)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH---
Confidence 345677888887766655555555556666777665 678887655 66777888999999999999999987654
Q ss_pred HHHHHHHHHHHHHHHHHHh----h-h-hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhh
Q 017754 206 VAMAVAQVVMAFALLYYAI----G-W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~----~-~-~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
..+.+++.++.+++.. . . ...++...++.|++.+...+.......|.+| +.+|++.++.+.....++.+.
T Consensus 276 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~ 351 (385)
T TIGR00710 276 ---RMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIV 351 (385)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHH
Confidence 3334444433333221 1 1 1233445566788888888888888888886 678999999887776655543
Q ss_pred hhHHHHHH
Q 017754 280 SGVIASGI 287 (366)
Q Consensus 280 gp~l~G~l 287 (366)
+| +.|.+
T Consensus 352 ~~-~~~~~ 358 (385)
T TIGR00710 352 GY-LVSLI 358 (385)
T ss_pred HH-HHHhc
Confidence 44 45544
No 167
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.01 E-value=5.6e-09 Score=100.91 Aligned_cols=173 Identities=17% Similarity=0.173 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
..|+-++++..+....+......+++-+++|+|..+. ++++..+.+.+.|+..|++.||+|-|+.. .+.+++
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~------~~s~~l 88 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT------ILSMLL 88 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH------HHHHHH
Confidence 3454444544444445555555666778899998887 89999999999999999999999987766 666666
Q ss_pred HHHHHHHHH--hhhh--HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 215 MAFALLYYA--IGWP--GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 215 ~~~~~~l~~--~~~~--~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
+.+.++.++ ..++ +.++++.++.|++ |+.++...+.++..||+++.|.+.|+.. ++++|..+ ...++-.+...
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av-~q~~~P~v~~~ 165 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAV-AQLVAPLVAVA 165 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHH-HHHHHHHHHHH
Confidence 666665554 2222 3777888888887 4557888889999999999999999988 88888875 56666655554
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
.+.. .|+.+..+.....++++++.++..
T Consensus 166 ~g~~-----------------------------~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 166 FGFL-----------------------------AWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred HhhH-----------------------------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4410 178888777777777666666554
No 168
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.00 E-value=1.6e-08 Score=97.64 Aligned_cols=103 Identities=18% Similarity=0.226 Sum_probs=81.9
Q ss_pred HHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh-hh--------HHHHHHHHHHHHHHhhhhhhHHH
Q 017754 180 IWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WP--------GEIYVTTVLVGLSYGAHWAIVPA 250 (366)
Q Consensus 180 i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~-~~--------~~l~~~~~l~G~~~g~~~~~~~~ 250 (366)
+...++.++.|+++||+|||+.+ .++.++.+++.++.... +. ..+++.+++.|++.+..++....
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~ 119 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTL------VITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAAL 119 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHH------HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHH
Confidence 34456889999999999998765 66667777766665532 21 13667788999999988888899
Q ss_pred HHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHh
Q 017754 251 AASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 251 ~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d 289 (366)
+++|.++.++|+...++...+..+|..+ ++.+.+.+..
T Consensus 120 ~~~~~~~~~~r~~~~~~~~~~~~~G~~i-~~~~~~~~~~ 157 (394)
T TIGR00883 120 YLAEYAPPGKRGFYGSFQQVGAPVGLLL-AALTVLLLSY 157 (394)
T ss_pred HhhhcCCcccchHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999999999999996 8887776654
No 169
>PRK11043 putative transporter; Provisional
Probab=98.99 E-value=3.5e-08 Score=96.73 Aligned_cols=159 Identities=15% Similarity=0.111 Sum_probs=104.9
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
++++.++++++|...+.+.+.......+..+.|.+.++.|++.... ......++..+|++..+++.||+++|+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~--- 271 (401)
T PRK11043 195 TFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL--- 271 (401)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH---
Confidence 4667788888887665555555555566677888888889987655 34445667778888899999999876543
Q ss_pred HHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 206 VAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
....+...+..+..+++.. .+...+.+...+.|++.+..++...+...+.++ +++|++.|+.+.....++.+ ++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~-~~~ 349 (401)
T PRK11043 272 PWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFL-ASL 349 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHH-HHH
Confidence 1112222222222222221 122334445566777777777777766667765 67999999999887777775 788
Q ss_pred HHHHHHhhh
Q 017754 283 IASGIYDYY 291 (366)
Q Consensus 283 l~G~l~d~~ 291 (366)
+.|.+.|..
T Consensus 350 ~~g~l~~~~ 358 (401)
T PRK11043 350 LVSALISTP 358 (401)
T ss_pred HHHHccCCC
Confidence 888887743
No 170
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.98 E-value=1.4e-09 Score=103.24 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=100.9
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 017754 175 VSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAAS 253 (366)
Q Consensus 175 vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~s 253 (366)
+-+.++..+-|-++.+++.||+|||+.+ +..+++.++..+++.. ..+....+..+..-++..+.+...+.+.+
T Consensus 387 llitslaefPGlLIt~~iverlGRKkTM------al~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtP 460 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRKKTM------ALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTP 460 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcchhHH------HHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecC
Confidence 4455678889999999999999999887 7777777777666553 23333333333444555666778888999
Q ss_pred HhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHH
Q 017754 254 ELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMA 333 (366)
Q Consensus 254 e~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~ 333 (366)
|+||++.|+++.|.......+|+++ .|.++ ...+..- +- ...+.+
T Consensus 461 EVyPTavRatgvGtcSsmaRIggI~-~p~iA-~~~e~s~--------------------------------sl-~i~vy~ 505 (528)
T KOG0253|consen 461 EVYPTAVRATGVGTCSSMARIGGIF-SPVIA-MRAELST--------------------------------SL-PIFVYG 505 (528)
T ss_pred cccchhhhhcchhhhhhHHhhhhhh-hhHHH-HHhccce--------------------------------ee-hHHHHH
Confidence 9999999999999999999999996 89888 2222211 33 334667
Q ss_pred HHHHHHHHHHHHHhhhchH
Q 017754 334 GLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 334 ~~~~~~~~~~~~~~~~~r~ 352 (366)
++++++.+++.++..++|.
T Consensus 506 ~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 506 ALFILAGIAVCFFPIETKG 524 (528)
T ss_pred HHHHHHHHHheeeeeccCC
Confidence 7888888888888777764
No 171
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.97 E-value=2.9e-08 Score=98.53 Aligned_cols=159 Identities=17% Similarity=0.231 Sum_probs=124.3
Q ss_pred CCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
..+++.++++.++.+++..++............+++.++ +|.+.... +..+..+...++.+++++++||+|+|+.+
T Consensus 216 ~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~-- 293 (428)
T PF13347_consen 216 DSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVY-- 293 (428)
T ss_pred cchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeeh--
Confidence 346778889998888888777766666556666777766 45553333 66778888999999999999999998877
Q ss_pred hHHHHHHHHHHHHHHHHHH-h--hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhC-------CCchhhHHHHHHhhhhh
Q 017754 205 PVAMAVAQVVMAFALLYYA-I--GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-------LKSFGALYNFLTLASPA 274 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~-~--~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-------~~~~g~~~g~~~~~~~~ 274 (366)
..+.++.+++.+++. . .+...+++..++.|++.+..+...+++.+|..+ .+.-|..+++.+....+
T Consensus 294 ----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~ 369 (428)
T PF13347_consen 294 ----IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI 369 (428)
T ss_pred ----hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH
Confidence 666666666665544 2 356678888889999999999999999988875 34579999999999999
Q ss_pred hHHhhhhHHHHHHHhhhh
Q 017754 275 GSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 275 G~~i~gp~l~G~l~d~~~ 292 (366)
|..+ ++.+.|.+.+..|
T Consensus 370 ~~~l-a~~i~g~~l~~~G 386 (428)
T PF13347_consen 370 GQGL-AGAIVGLLLALVG 386 (428)
T ss_pred HHHH-HHHHHHHHHHHhC
Confidence 9996 8999999887765
No 172
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.97 E-value=5.6e-09 Score=99.41 Aligned_cols=149 Identities=16% Similarity=0.233 Sum_probs=107.7
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHH-HHHhCCC-hhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQI-CQSLGYA-DTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i-~~~~g~s-~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
++..++++.+|.++...++..........++|.+ .+.+|++ .... ..++..+...+++++.|+++||+++++..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-- 276 (352)
T PF07690_consen 199 FKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRL-- 276 (352)
T ss_dssp CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH--
T ss_pred cccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH--
Confidence 5566777777855555555555555677888887 5778888 4444 68888888899999999999999875433
Q ss_pred hHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 205 PVAMAVAQVVMAFALLYYAIG-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
........+..++..+.... +....++..++.|++.+..++.....+.+.+|++++|+++|+.+....+|+.+ ||
T Consensus 277 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~i-gP 352 (352)
T PF07690_consen 277 -LIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGII-GP 352 (352)
T ss_dssp -HHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHH-HH
T ss_pred -HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-CC
Confidence 12222222222222222222 34455667788899999989999999999999999999999999999999996 76
No 173
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.96 E-value=1.5e-08 Score=103.22 Aligned_cols=137 Identities=18% Similarity=0.206 Sum_probs=111.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHH
Q 017754 173 IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAA 251 (366)
Q Consensus 173 ~~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~ 251 (366)
.+.+...++..+|.+..|+++|++|||+.+ .++.++..++.++.+ ..+...+++++++.|+|.|....+.|.+
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l------~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTL------LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhh
Confidence 489999999999999999999999999877 788888888888877 4466789999999999999999999999
Q ss_pred HHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHH
Q 017754 252 ASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGI 331 (366)
Q Consensus 252 ~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i 331 (366)
++|+-|.+.||...+.......+|..+ + .+.|+..+... ..||..+.+
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~-~-~~~~~~~~~~~------------------------------~~Wr~~~~~ 214 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILL-G-YCINYGTSKVY------------------------------AGWRIPLGL 214 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHH-H-HHHhhhhccCC------------------------------ccHHHHHHH
Confidence 999999999999999999998877774 5 55555544330 129988887
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017754 332 MAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 332 ~~~~~~~~~~~~~~~~~ 348 (366)
..+.+++-.+. +.+.+
T Consensus 215 ~~i~~~~~~~~-~~~~p 230 (513)
T KOG0254|consen 215 ALIPAVILALG-MLFLP 230 (513)
T ss_pred HHHHHHHHHHH-HHhCC
Confidence 77777666655 44443
No 174
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.93 E-value=2.8e-08 Score=100.66 Aligned_cols=155 Identities=11% Similarity=-0.032 Sum_probs=118.5
Q ss_pred HHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhH
Q 017754 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPV 206 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~ 206 (366)
.+.++++.++...+..++..........++|++.+. +|++..++ ......++..++.++.|+++||+++|+..
T Consensus 253 ~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~---- 328 (495)
T PRK14995 253 MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA---- 328 (495)
T ss_pred HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH----
Confidence 467888888877766666666666666778887765 68987766 66777888899999999999999876543
Q ss_pred HHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 207 AMAVAQVVMAFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 207 ~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
..+.++++++.+++.. .+....+...++.|++.|...+.....+.+..|.+++|.+.++.++...+|+.+ |+.
T Consensus 329 --~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~-G~a 405 (495)
T PRK14995 329 --TGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGL-GIA 405 (495)
T ss_pred --HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHH-HHH
Confidence 5555555655544431 123345566778899988887777777888899999999999999999999996 999
Q ss_pred HHHHHHhhh
Q 017754 283 IASGIYDYY 291 (366)
Q Consensus 283 l~G~l~d~~ 291 (366)
+.|.+++..
T Consensus 406 i~g~i~~~~ 414 (495)
T PRK14995 406 IFGLLLSRS 414 (495)
T ss_pred HHHHHHHHH
Confidence 999998764
No 175
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.93 E-value=6.2e-08 Score=94.68 Aligned_cols=151 Identities=10% Similarity=0.056 Sum_probs=87.6
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
.++.++++.+|...+...+.......+..+.|.+. +++|++.... ..+...++..+++++.|+++||++||+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~--- 272 (392)
T PRK10473 196 NSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLM--- 272 (392)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH---
Confidence 44667888877655554444444444555566655 4578887654 66778888999999999999999987654
Q ss_pred HHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCch-hhHHHHHHhhhhhhHHhhhhHH
Q 017754 206 VAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF-GALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~-g~~~g~~~~~~~~G~~i~gp~l 283 (366)
.++.++..++.+++.. ......+....+.+.|.+..++. ....++.+.+.+ |.+.++ ..++..+ |+.+
T Consensus 273 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~g~~~~~----~~~~~~~-g~~~ 342 (392)
T PRK10473 273 ---LTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGV--AMSQALGPFSLRAGVASST----LGIAQVC-GSSL 342 (392)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHHHHhccCcccccHHHHH----HHHHHHH-HHHH
Confidence 4455555555444432 22233334444444444443332 233344444333 444443 3445553 6666
Q ss_pred HHHHHhhhh
Q 017754 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
++++.+..+
T Consensus 343 ~~~l~~~~g 351 (392)
T PRK10473 343 WIWLAAVLG 351 (392)
T ss_pred HHHHHHHhc
Confidence 777777665
No 176
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.93 E-value=4.2e-09 Score=100.40 Aligned_cols=108 Identities=19% Similarity=0.170 Sum_probs=92.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHhhhhhhHHHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPG-EIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
.-|.+++..++..+.+|.+||++|||..+ .++.+..++.+.+++..... .+.+.+++.|+.-|- ..+.-+++
T Consensus 73 lGSsF~ilQ~~sS~~~G~~SD~yGRkpvl------l~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgn-l~v~rAii 145 (451)
T KOG2615|consen 73 LGSSFSILQFISSPLWGCLSDRYGRKPVL------LACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGN-LSVIRAII 145 (451)
T ss_pred HhhHHHHHHHHhhhhhhhhhhhhCchHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hHHHHHHH
Confidence 78899999999999999999999998766 66666667777777654433 455569999988776 56788899
Q ss_pred HHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHh
Q 017754 253 SELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 253 se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d 289 (366)
+|++++|+++.+++.++.+..+|-.+ ||.++|++..
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfil-GPmIGgyla~ 181 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFIL-GPMIGGYLAQ 181 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhh-cchhhhHHHh
Confidence 99999999999999999999999996 9999999987
No 177
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.91 E-value=2.6e-08 Score=95.86 Aligned_cols=141 Identities=16% Similarity=0.145 Sum_probs=96.1
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
..+.++++++|.+.+..++.......+..++|++.++ +|++..+. +.++..+.+.++++++|+++||+++|+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--- 294 (366)
T TIGR00886 218 QLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL--- 294 (366)
T ss_pred HHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH---
Confidence 4456777888888777777666666777888888865 68877655 67778888999999999999999987544
Q ss_pred HHHHHHHHHHHHHHHHH--Hhh---hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhH
Q 017754 206 VAMAVAQVVMAFALLYY--AIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGS 276 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~--~~~---~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~ 276 (366)
..+..+.+.+..++ ... +....++...+.+++.|...+..++.++++++ +++|+.+|+.+....+|+
T Consensus 295 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 295 ---LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred ---HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 22233333333222 222 22333344444455556656667777888886 799999999988877663
No 178
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.89 E-value=1.3e-07 Score=95.13 Aligned_cols=175 Identities=14% Similarity=0.088 Sum_probs=113.5
Q ss_pred hHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhh----hhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 017754 151 SGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEA----IVRKFAYPRPVAMAVAQVVMAFALLYYAI 224 (366)
Q Consensus 151 ~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~----~grr~~~~R~~~~~~~~~~~~~~~~l~~~ 224 (366)
.......+++.+.+++|.+.... ......+...+..|+.|++||| +|||+.+ +..+.+..+++++++..
T Consensus 19 ~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~-----il~g~~~~~~~l~ll~~ 93 (477)
T TIGR01301 19 GWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF-----IAAGAALVAFAVILIGF 93 (477)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH-----HHHHHHHHHHHHHHHHh
Confidence 33345566777889999987665 6777788899999999999995 7775443 33344444555445442
Q ss_pred h-hh-----------------HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCch--hhHHHHHHhhhhhhHHhhhhHHH
Q 017754 225 G-WP-----------------GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF--GALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 225 ~-~~-----------------~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~--g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
. +. ....++..+..++.....+..-++++|+++.+++ +.++++.+....+|+.+ |+.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~il-g~~~g 172 (477)
T TIGR01301 94 AADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVL-GYAAG 172 (477)
T ss_pred CchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 1 11 1112222233446666667777899999998864 67899999999999996 88877
Q ss_pred HHH--HhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhc
Q 017754 285 SGI--YDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 350 (366)
Q Consensus 285 G~l--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 350 (366)
|+. .+..+- ...+..+.-+.+++..|++.+++.+++.++.++..++.
T Consensus 173 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 173 AYSGLYKIFPF-------------------TKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHhHHHhccc-------------------ccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 764 222110 00011122233589999998888888777777665553
No 179
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.88 E-value=5.3e-09 Score=104.82 Aligned_cols=144 Identities=14% Similarity=0.209 Sum_probs=120.2
Q ss_pred hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHH
Q 017754 166 LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG---WPGEIYVTTVLVGLS 240 (366)
Q Consensus 166 ~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~---~~~~l~~~~~l~G~~ 240 (366)
+.++..+- +.+.+..+..++.+.+|++.||+|-|+.. ..+.++.+++.++.... ....+.+.++++|++
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~------~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF------FISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH------HHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 44554443 88889999999999999999999988766 66777777776665421 223678899999999
Q ss_pred HhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh-hhhhhhhhhhhccCCCCCcccCCCCCCcc
Q 017754 241 YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY-YAEKQAGLLWKYNGNMLPVSFRDQETPTC 319 (366)
Q Consensus 241 ~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 319 (366)
.|..++.+..+.+.+.|+++|++..+++..+..+|..+ +-+++|++.+. .|
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~-~mp~sg~lc~s~~G--------------------------- 193 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTII-TMPVSGLLCESSLG--------------------------- 193 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHhccCCC---------------------------
Confidence 99999999999999999999999999999999999996 77899999988 44
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 320 LGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 320 ~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|+..|++.++++++-.++.+++..
T Consensus 194 -----W~sifY~~g~~g~i~~~~w~~~~~ 217 (466)
T KOG2532|consen 194 -----WPSIFYVFGIVGLIWFILWFLFYS 217 (466)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999998887777766654
No 180
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.88 E-value=9.4e-08 Score=93.47 Aligned_cols=169 Identities=14% Similarity=0.051 Sum_probs=108.0
Q ss_pred HHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH-H---HHHHHHHHhhhhhhh-hhhhhhhhhhccCchhHHHHHHHHHH
Q 017754 141 LFFSLVLASGSGLTVIDNLGQICQSLGYADTSI-Y---VSMISIWNFLGRVGG-GYFSEAIVRKFAYPRPVAMAVAQVVM 215 (366)
Q Consensus 141 l~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~-~---vsl~~i~~~~g~~~~-G~lsD~~grr~~~~R~~~~~~~~~~~ 215 (366)
++..++............+|.+.++.|++..++ + .+++.+..++..+++ ++.+||+|||+.+ . ...+++.
T Consensus 6 ~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~----i-~~~~~~~ 80 (390)
T TIGR02718 6 LGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSW----V-LPMQCLV 80 (390)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhH----H-HHHHHHH
Confidence 344444444444456678999999999998877 3 355566666666666 4567777765442 2 2222222
Q ss_pred HHHHHHHH---hh-h-hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 216 AFALLYYA---IG-W-PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 216 ~~~~~l~~---~~-~-~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
+.....+. .. . ...+.....+.+++...+-+..-++..|..+.++++...+....+..+|..+ |+.+.+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~-g~~~~~~l~~~ 159 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFG-GGAGTLVLFGK 159 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 21111111 11 1 1222333334445555566666667788888888888878877777888886 88888999988
Q ss_pred hhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017754 291 YAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVV 347 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~ 347 (366)
.+ |+..|++.+++.++..+..+++.
T Consensus 160 ~g--------------------------------w~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 160 FG--------------------------------QRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred hC--------------------------------HHHHHHHHHHHHHHHHHHHHHcC
Confidence 87 99999999988877666655443
No 181
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.86 E-value=7.3e-08 Score=92.84 Aligned_cols=139 Identities=17% Similarity=0.143 Sum_probs=96.4
Q ss_pred HHHHhhhhh---HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHH-HHHhhhhhhhhhhhhhhhhhccC
Q 017754 129 LPQALMKAD---FLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 129 ~~~~l~~~~---~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~-i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
+++.++++. +|.+.+..++..........++|.+.+++|++..+. ..+... +...+|.+++|+++||+++|+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l 278 (356)
T TIGR00901 199 IREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL 278 (356)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 344455553 666665555555555566778888888899988765 343334 56778999999999999987654
Q ss_pred chhHHHHHHHHHHHHHHHHHHh------------hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHh
Q 017754 203 PRPVAMAVAQVVMAFALLYYAI------------GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL 270 (366)
Q Consensus 203 ~R~~~~~~~~~~~~~~~~l~~~------------~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~ 270 (366)
..+.++.+++..++.. .+...+..+.++.+++.+..++...++..|.+|++++|+.+|+.+.
T Consensus 279 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 352 (356)
T TIGR00901 279 ------LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSS 352 (356)
T ss_pred ------HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHH
Confidence 3444444444333221 1123345556677888898999999999999999999999999877
Q ss_pred hhh
Q 017754 271 ASP 273 (366)
Q Consensus 271 ~~~ 273 (366)
..+
T Consensus 353 ~~~ 355 (356)
T TIGR00901 353 LSA 355 (356)
T ss_pred HHh
Confidence 654
No 182
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.85 E-value=4.6e-08 Score=96.75 Aligned_cols=166 Identities=13% Similarity=0.165 Sum_probs=107.9
Q ss_pred hcHHH-HHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hh------
Q 017754 157 DNLGQ-ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GW------ 226 (366)
Q Consensus 157 ~~l~~-i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~------ 226 (366)
.++++ +.+.+|.+...+ ..++..++..+..|+.|+++||.++|+..+|+++ ..+.+..+++.+++.. ++
T Consensus 20 ~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i-~~~~~~~~i~~~~~~~~~~~~~~~~ 98 (437)
T TIGR00792 20 TYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWL-LIGAIPFSIVLVLLFTTPDFSATGK 98 (437)
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhH-HHhHHHHHHHHHHHHhCCCCCcchH
Confidence 33444 445689988766 7888889999999999999999876665444444 4444444544444432 21
Q ss_pred hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhC-CCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCC
Q 017754 227 PGEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN 305 (366)
Q Consensus 227 ~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~ 305 (366)
....++..++.+++++.......+..+|+.. .++|+...++.+....+|+.+ ++.+.+.+....+...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l-~~~~~~~l~~~~~~~~---------- 167 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLL-VAVIVLPLVSYFGGGD---------- 167 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCc----------
Confidence 1123344455666666655566677788874 578999999988888888885 6666666654332000
Q ss_pred CCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 306 MLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 306 ~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
....|+..+.+.++++++..+......++
T Consensus 168 ---------------~~~g~~~~~~i~~~l~~~~~~~~~~~~~e 196 (437)
T TIGR00792 168 ---------------DKFGWFMFALVLALIGVVSLIICFFGTKE 196 (437)
T ss_pred ---------------ccccHHHHHHHHHHHHHHHHHHHHcCCEe
Confidence 01139999988888777766655544433
No 183
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.84 E-value=1.6e-07 Score=90.97 Aligned_cols=148 Identities=9% Similarity=0.032 Sum_probs=85.6
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++.++++.+|...+..++.......+..+.|.+. +.+|++..+. ..+...++..+++++.|+++||+++|+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--- 263 (377)
T PRK11102 187 FASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNML--- 263 (377)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH---
Confidence 34566777777666555555444455555666655 4478887665 67778888999999999999999987654
Q ss_pred HHHHHHHHH---HHHHHHHHHhhh--hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhh-hhhHHhh
Q 017754 206 VAMAVAQVV---MAFALLYYAIGW--PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLAS-PAGSLIF 279 (366)
Q Consensus 206 ~~~~~~~~~---~~~~~~l~~~~~--~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~-~~G~~i~ 279 (366)
..+..+ +.+..+.....+ .....++..+.+.+.+.........+.|..| +.+|...++.+... .+|+.+
T Consensus 264 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~- 338 (377)
T PRK11102 264 ---RFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIV- 338 (377)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHH-
Confidence 332222 222222221111 1222333333333344434444455667665 77888888866543 344443
Q ss_pred hhHHH
Q 017754 280 SGVIA 284 (366)
Q Consensus 280 gp~l~ 284 (366)
+++++
T Consensus 339 g~~~~ 343 (377)
T PRK11102 339 GALLS 343 (377)
T ss_pred HHHHH
Confidence 55443
No 184
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.84 E-value=2.2e-07 Score=89.54 Aligned_cols=156 Identities=17% Similarity=0.179 Sum_probs=115.6
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
...++++++.++...++.|+..+...+.-++++.+..+ .|.+..+. +++.+..+.++||.++-++-.|+...+..
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~L-- 305 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYL-- 305 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH--
Confidence 57889999999999999999999999999999999988 78777665 89999999999998877776677543322
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 205 PVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
....++..+-++..+..+......+.++.|++.+..|+...+...+..| ++-...-+++.+ ..+|+.+ -|++.
T Consensus 306 ----af~a~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~m-aivGGAi-iP~l~ 378 (422)
T COG0738 306 ----AFYALIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVM-AIVGGAI-IPPLQ 378 (422)
T ss_pred ----HHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeee-heecchH-HHHHH
Confidence 2222222222222223333455667778899999999999999999998 544444444444 4566665 59999
Q ss_pred HHHHhhhh
Q 017754 285 SGIYDYYA 292 (366)
Q Consensus 285 G~l~d~~~ 292 (366)
|++.|..+
T Consensus 379 G~i~d~~g 386 (422)
T COG0738 379 GVIADMFG 386 (422)
T ss_pred HHHHHhhh
Confidence 99999987
No 185
>PRK11462 putative transporter; Provisional
Probab=98.82 E-value=5.5e-07 Score=90.52 Aligned_cols=157 Identities=8% Similarity=0.054 Sum_probs=94.3
Q ss_pred HHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHh-CCChhH-HHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017754 130 PQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSL-GYADTS-IYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 130 ~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~-g~s~~~-~~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
+..++|+.++.+...+++.............++.+.. |..... .+.....+.+++|.+++++++||+++|+..
T Consensus 222 ~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~----- 296 (460)
T PRK11462 222 RDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF----- 296 (460)
T ss_pred HHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH-----
Confidence 4456677777665554444443333333333444432 332222 256677788889999999999999887543
Q ss_pred HHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhC-------CCchhhHHHHHHhhhhhhHHh
Q 017754 208 MAVAQVVMAFALLYYAIG--WPGEIYVTTVLVGLSYGAHWAIVPAAASELFG-------LKSFGALYNFLTLASPAGSLI 278 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-------~~~~g~~~g~~~~~~~~G~~i 278 (366)
..........+.+++..+ +...+++..++.|++.+...++.+++++|... .+.-|..++..+....+|..+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~al 376 (460)
T PRK11462 297 WWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAF 376 (460)
T ss_pred HHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHH
Confidence 111111212122222222 22234455566777777766666777776644 455677788888888999996
Q ss_pred hhhHHHHHHHhhhh
Q 017754 279 FSGVIASGIYDYYA 292 (366)
Q Consensus 279 ~gp~l~G~l~d~~~ 292 (366)
|+.+.|.+.+..|
T Consensus 377 -g~~i~g~iL~~~G 389 (460)
T PRK11462 377 -GGALIGWMLAYGG 389 (460)
T ss_pred -HHHHHHHHHHHcC
Confidence 8999999988654
No 186
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.77 E-value=7.2e-07 Score=90.90 Aligned_cols=132 Identities=13% Similarity=0.101 Sum_probs=96.9
Q ss_pred HHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hhhHH
Q 017754 154 TVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGE 229 (366)
Q Consensus 154 ~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~~~ 229 (366)
.+...+|.+.++ +|.+.... +.+.++++..+|.++.+++.+++.+++.. ..+.++.+++.+.++. .+.+.
T Consensus 236 a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv------~~~~~~~a~~~~~lal~~~~~~ 309 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLV------LLASLLFALALLLLALSPSFWL 309 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhh------HHHHHHHHHHHHHHhcchHHHH
Confidence 344557877754 67665543 67777778788888777777666554333 5566666666666664 34455
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 230 IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 230 l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
..++.++.|++.....+...+.+-+..|.+.+|..+++..+....+..+ |..+.|.+.|..+
T Consensus 310 ~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~l-Gsll~G~la~~~g 371 (524)
T PF05977_consen 310 ALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPL-GSLLWGFLADHFG 371 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHhC
Confidence 5667777888887777777778888888899999999999888777775 9999999999887
No 187
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.77 E-value=7.8e-08 Score=97.52 Aligned_cols=152 Identities=14% Similarity=0.146 Sum_probs=121.8
Q ss_pred hcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh-hhHHHH-H
Q 017754 157 DNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WPGEIY-V 232 (366)
Q Consensus 157 ~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~-~~~~l~-~ 232 (366)
-..+.+.++++.+..++ ..++......+..|+.+.+.||+|.|... .++.++.++|+++..+. +.+.++ .
T Consensus 67 v~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~------i~G~~v~~~g~~lssF~~~i~~l~lt 140 (509)
T KOG2504|consen 67 LLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVM------IAGGLVAALGLLLSSFATSLWQLYLT 140 (509)
T ss_pred hhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHH------HHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34556777888776643 78888888888899999999999987766 77888888888776643 344444 4
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccC
Q 017754 233 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFR 312 (366)
Q Consensus 233 ~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~ 312 (366)
..++.|+|.|..+.....++..+| .|+|+.+.|+...+.++|..++ |++..++.+..|
T Consensus 141 ~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~-~~l~~~l~~~~G-------------------- 198 (509)
T KOG2504|consen 141 FGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVF-PPLLKYLLSKYG-------------------- 198 (509)
T ss_pred HHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeH-HHHHHHHHHHhC--------------------
Confidence 567789999988888787888777 7889999999999999999986 888999999998
Q ss_pred CCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 313 DQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 313 ~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
||.++++.+.+++-+++..+.+.+
T Consensus 199 ------------~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 199 ------------WRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999888776666665544
No 188
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.74 E-value=6e-07 Score=87.76 Aligned_cols=155 Identities=12% Similarity=0.074 Sum_probs=95.0
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++.++++.+|...+..++.......+....+.+.++ +|++.... ......++..+|.++.+++.||.+++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~----- 274 (394)
T PRK11652 200 YRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM----- 274 (394)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 4566778888765554444333333333445556655 78876654 344445555666666677777665311
Q ss_pred HHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 206 VAMAVAQVVMAFALLYYAI---GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l~~~---~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
.......++..+..+.... .+...++...++.|++.+...+...+...|.++ +++|+..++.+...++|+.+ ++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~-~~~ 352 (394)
T PRK11652 275 WQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGL-AAL 352 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHH-HHH
Confidence 1112222222222222211 223445566777888888888888888888885 67899999999999999996 898
Q ss_pred HHHHHHhh
Q 017754 283 IASGIYDY 290 (366)
Q Consensus 283 l~G~l~d~ 290 (366)
++|++.+.
T Consensus 353 ~~~~~~~~ 360 (394)
T PRK11652 353 LSAMLPQT 360 (394)
T ss_pred HHHHccCC
Confidence 88887554
No 189
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.73 E-value=1e-06 Score=86.56 Aligned_cols=127 Identities=12% Similarity=-0.023 Sum_probs=81.3
Q ss_pred hcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh-hhHHHHH
Q 017754 157 DNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG-WPGEIYV 232 (366)
Q Consensus 157 ~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~-~~~~l~~ 232 (366)
..+|.+.+ .+|++.... ..+...++..+|.+..+++.||.++++.. ..+. ++++..+++... +.....+
T Consensus 226 ~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~------~~g~-~~~~~~~~~~~~~~~~~~~~ 298 (393)
T PRK11195 226 FLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL------PAGI-LMGLVVLLMALQHSLLPAYP 298 (393)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH------HHHH-HHHHHHHHHHHHhHHHHHHH
Confidence 34444444 468877655 66777778888888888888876654332 3333 223333333322 2333445
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhhCCCc-hhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 233 TTVLVGLSYGAHWAIVPAAASELFGLKS-FGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 233 ~~~l~G~~~g~~~~~~~~~~se~f~~~~-~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
..++.|++.+...+...+.+.+.-+.+. +|.+.++.++...+|..+ +..+.+.+ +..+
T Consensus 299 ~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~-~~~~~~~~-~~~~ 357 (393)
T PRK11195 299 LLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLL-MLGLYSLL-VKLG 357 (393)
T ss_pred HHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHH-HHHHHHHH-HHcC
Confidence 5667788877766666677777644433 699999999999999996 88888755 4554
No 190
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.72 E-value=2.5e-07 Score=93.24 Aligned_cols=143 Identities=14% Similarity=0.183 Sum_probs=109.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAAS 253 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~s 253 (366)
..+++.++.++|.+.+|.+.||+.-.+ .....+.+....+.+-....+.+.+++.+++.|++-++.|+....+++
T Consensus 86 ~~t~F~v~Yii~~~p~~~L~~r~~ls~-----~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg 160 (495)
T KOG2533|consen 86 LDTVFYVGYIIGQFPSGLLGDRFPLSK-----GLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILG 160 (495)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCChHH-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 889999999999999999999997222 222333333333333333445667888999999999999999999999
Q ss_pred HhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHH
Q 017754 254 ELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMA 333 (366)
Q Consensus 254 e~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~ 333 (366)
.+|+.+++|...++.+....+|+.+ |++++..++...+. .+..+|++.|.+.+
T Consensus 161 ~wy~~~e~g~r~~~~~a~~~~g~i~-ggliA~g~~~~~~~--------------------------~~~~gW~~~FiI~G 213 (495)
T KOG2533|consen 161 NWYGKSERGLRMGIWYASASLGNIF-GGLIAYGVFKLNGS--------------------------GGLAGWRWLFIIEG 213 (495)
T ss_pred hhcChhhhhhhHHHHHHhcchhhHH-HHHHHHHhhhhcCC--------------------------CCcCCceeehhHHH
Confidence 9999999999999999999999995 99988887664431 01124999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 017754 334 GLCIIAMVMSLIVVH 348 (366)
Q Consensus 334 ~~~~~~~~~~~~~~~ 348 (366)
+++++..++.+++.+
T Consensus 214 ~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 214 VITLVLGIVVFFFLP 228 (495)
T ss_pred HHHHHHHheEEEEec
Confidence 998887776665543
No 191
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.70 E-value=7.2e-07 Score=88.57 Aligned_cols=155 Identities=15% Similarity=0.118 Sum_probs=107.2
Q ss_pred HHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH-HHHHHHHHH-hhhhhhhhhhhhhhhhhccCchhHH
Q 017754 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI-YVSMISIWN-FLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~-~vsl~~i~~-~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
..++|+.+.++.+++++...........+.++.+. +|.++... .....+.+. .++.+++..+++|+|+|+.+
T Consensus 231 ~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~----- 305 (467)
T COG2211 231 LIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF----- 305 (467)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH-----
Confidence 46678777777666665555444333344444433 45555444 344444444 44588999999999998876
Q ss_pred HHHHHHHHHHHHHHHHh-h--hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhh-------CCCchhhHHHHHHhhhhhhHH
Q 017754 208 MAVAQVVMAFALLYYAI-G--WPGEIYVTTVLVGLSYGAHWAIVPAAASELF-------GLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~-~--~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f-------~~~~~g~~~g~~~~~~~~G~~ 277 (366)
.++.++.+++.+++.. + +...+++..++.+++.+...++.+++++|.. |.+.-|..++.+....-+|..
T Consensus 306 -~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~a 384 (467)
T COG2211 306 -LIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLA 384 (467)
T ss_pred -HHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHH
Confidence 6666666666655442 2 3345666678889999999999999998764 445678999999999999999
Q ss_pred hhhhHHHHHHHhhhh
Q 017754 278 IFSGVIASGIYDYYA 292 (366)
Q Consensus 278 i~gp~l~G~l~d~~~ 292 (366)
+ +..+.|++.+..|
T Consensus 385 l-a~~~~g~~L~~~G 398 (467)
T COG2211 385 L-AGFIPGWILGAIG 398 (467)
T ss_pred H-HHHHHHHHHHHcC
Confidence 6 8889999988765
No 192
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.63 E-value=3.2e-06 Score=80.62 Aligned_cols=154 Identities=17% Similarity=0.177 Sum_probs=123.8
Q ss_pred HHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 017754 154 TVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIY 231 (366)
Q Consensus 154 ~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~ 231 (366)
.+-..++++-+++|.+.+.+ ..+++.++..+..++..++..|+|.++.. ..++++.++|.++=.......++
T Consensus 30 svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l------~~~Llli~~G~~iR~~~~~~~L~ 103 (395)
T COG2807 30 SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSL------FLALLLIAAGILIRSLGGLPLLF 103 (395)
T ss_pred hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHH------HHHHHHHHHHHHHHhcccHHHHH
Confidence 34455777788899988776 88999999999999999999999987765 77777777777664444566788
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCccc
Q 017754 232 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSF 311 (366)
Q Consensus 232 ~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~ 311 (366)
.+..+.|+|.+....+.|+.+-+.|| |+.+..+|++.+...+|+.+ ++.++-.+.++.+
T Consensus 104 ~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaL-aa~lavpla~~~~------------------- 162 (395)
T COG2807 104 LGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAAL-AAALAVPLAQHSG------------------- 162 (395)
T ss_pred HHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHH-HhhhhhHHHHhhc-------------------
Confidence 99999999999999999999999994 66788999999988888885 7666666655542
Q ss_pred CCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 312 RDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 312 ~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
+|+.+..+.+..++++.+..+.-
T Consensus 163 ------------gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 163 ------------GWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHHhhh
Confidence 29999999998888887766554
No 193
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.63 E-value=8e-08 Score=93.80 Aligned_cols=177 Identities=14% Similarity=0.075 Sum_probs=116.8
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHhCCChhHH----------HHHHHHHHHhh-hhhhhhhhhhhhhhhccCchhHHHHHH
Q 017754 143 FSLVLASGSGLTVIDNLGQICQSLGYADTSI----------YVSMISIWNFL-GRVGGGYFSEAIVRKFAYPRPVAMAVA 211 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~----------~vsl~~i~~~~-g~~~~G~lsD~~grr~~~~R~~~~~~~ 211 (366)
..+|..-.+.+....+...|.++.|+.+... .-.+...++.+ |-.+..+++|++|||+.. ..+
T Consensus 311 ~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq------~~G 384 (538)
T KOG0252|consen 311 GTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQ------LMG 384 (538)
T ss_pred HHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHH------Hhh
Confidence 3344444445555566777888888754321 22333344444 777888999999998876 777
Q ss_pred HHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHH
Q 017754 212 QVVMAFALLYYAIGWP------GEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 212 ~~~~~~~~~l~~~~~~------~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G 285 (366)
+.++.+..+.++.+.. +.+....+.+-++.-+..+....+.+|.||.+.||+.+|+....+-+|+.+ |...++
T Consensus 385 F~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAiv-g~~~F~ 463 (538)
T KOG0252|consen 385 FFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIV-GAFGFL 463 (538)
T ss_pred HHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHH-HHHHhh
Confidence 7777777776663322 111122222223333445556667899999999999999999999999996 877777
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchHHH
Q 017754 286 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVY 354 (366)
Q Consensus 286 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~ 354 (366)
++.++.-.+. . .++++|++++++++++.+..+++. +++++-
T Consensus 464 ~~t~~~yp~~-------~--------------------g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~ 504 (538)
T KOG0252|consen 464 YLTDHNYPPN-------I--------------------GVRNVFIILAGCMLLGILFTLLIP-ETKGKS 504 (538)
T ss_pred HhhhccCCcc-------c--------------------cchHHHHHHHHHHHHhHheeEEee-cccccC
Confidence 6666321000 0 289999999999999988877766 555433
No 194
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.62 E-value=1.3e-06 Score=88.03 Aligned_cols=171 Identities=19% Similarity=0.153 Sum_probs=109.1
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHH-HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQ-SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~-~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~ 214 (366)
..++...++..... ......++.+.+ ++|.+.+++ +.++..+.-.+ .+++|.++|+++. ..++|++++.++.++
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i-~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPL-FGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCC-CCccchHHHHHHHHH
Confidence 34444445554444 334444555555 689998876 56666665555 5669999999962 234455566666655
Q ss_pred H-HHHHHHHHhh-hhHHHH-HHHHHHHHHHhhhhhhHHHHHHHhhCCCchhh---HHHHHHhhhhhhHHhhhhHHHHHHH
Q 017754 215 M-AFALLYYAIG-WPGEIY-VTTVLVGLSYGAHWAIVPAAASELFGLKSFGA---LYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 215 ~-~~~~~l~~~~-~~~~l~-~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~---~~g~~~~~~~~G~~i~gp~l~G~l~ 288 (366)
. ++++..++.. +....+ +..++.+++.+.+-...-++..|..+ +..+. ..+.......+|..+ |+.++|.+.
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~v-g~~l~G~l~ 182 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLI-SSLLGGPLL 182 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHH-HHHHHHHHH
Confidence 5 3443333322 222233 35667788888888888889999987 44333 334444445578885 999999999
Q ss_pred hhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017754 289 DYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
+..+ |+..|++.+++.++..+..++
T Consensus 183 ~~~~--------------------------------~~~~f~~~a~l~ll~~~~~~~ 207 (468)
T TIGR00788 183 DKTL--------------------------------TRILFLITAALLLLQLFVSNL 207 (468)
T ss_pred HhcC--------------------------------cchHHHHHHHHHHHHHHHHHh
Confidence 8876 999999988887776443333
No 195
>PRK09669 putative symporter YagG; Provisional
Probab=98.61 E-value=1.1e-06 Score=87.59 Aligned_cols=163 Identities=15% Similarity=0.115 Sum_probs=100.6
Q ss_pred hcHHH-HHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHH-HHhhh---h--
Q 017754 157 DNLGQ-ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY-YAIGW---P-- 227 (366)
Q Consensus 157 ~~l~~-i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l-~~~~~---~-- 227 (366)
.+++. +.+.+|.+...+ ..++.-+++.+..|+.|+++||...|+..+|++++.. .+..++..++ +..++ .
T Consensus 30 ~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~-~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWF-AIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHH-HHHHHHHHHHHHhCCCCCcchH
Confidence 33444 445689987765 7888889999999999999999877666556655443 3333333333 32221 1
Q ss_pred -HHHHHHHHHHHHHHhhhhhhHHHHHHHhh-CCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCC
Q 017754 228 -GEIYVTTVLVGLSYGAHWAIVPAAASELF-GLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN 305 (366)
Q Consensus 228 -~~l~~~~~l~G~~~g~~~~~~~~~~se~f-~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~ 305 (366)
...++..++++.++........++.+|+. ..++|....+.-.....+|+.+ ++.+...+....+...
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i-~~~~~~pl~~~~~~~~---------- 177 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLI-VSVIALPLVDILGKGD---------- 177 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCc----------
Confidence 12233344556666665566667888887 4467888888877777777775 5555444443322100
Q ss_pred CCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 306 MLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 306 ~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
....|+..+.+.+++++++.+.+++.
T Consensus 178 ---------------~~~g~~~~~~i~~ii~~v~~~~~~~~ 203 (444)
T PRK09669 178 ---------------EQKGYFYAMMVMGLLGVVLFFCCFFM 203 (444)
T ss_pred ---------------hhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 00138888888887777666555443
No 196
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.57 E-value=3.6e-06 Score=81.30 Aligned_cols=133 Identities=9% Similarity=-0.034 Sum_probs=108.1
Q ss_pred hHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh----
Q 017754 151 SGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI---- 224 (366)
Q Consensus 151 ~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~---- 224 (366)
........+|++.+.+..+..++ .-..+..+.+++.+-.|++.+|+|+|+.+ ..++.++++++.++..
T Consensus 28 ~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi------~lgL~l~avg~~lF~pAa~~ 101 (422)
T COG0738 28 ITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI------VLGLLLYAVGAALFWPAASS 101 (422)
T ss_pred HhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH------HHHHHHHHHHHHHHhhhhhh
Confidence 33344556788888888887766 55555667778889999999999999887 8999999999988752
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 225 GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 225 ~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
.+...+.++.++.|.|.|..-+...++++.+.++++-....|+....+++|+.+ +|++++++.++
T Consensus 102 ~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~-gp~~g~~lils 166 (422)
T COG0738 102 KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAIL-GPLLGSSLILS 166 (422)
T ss_pred hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHH-HHHHHHHHHHh
Confidence 223455666778888888888888889999999988888999999999999997 99999999884
No 197
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.55 E-value=8.6e-07 Score=86.72 Aligned_cols=108 Identities=18% Similarity=0.240 Sum_probs=85.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh----hhh----HHHHHHHHHHHHHHhhhh
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI----GWP----GEIYVTTVLVGLSYGAHW 245 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~----~~~----~~l~~~~~l~G~~~g~~~ 245 (366)
.-....+++++|+++.|++.|++|||+.+ ...++++.++.++.+. ..+ ..+...+++.|+|.|+-+
T Consensus 89 Vn~~A~vGti~GQl~FG~lgD~~GRK~vY------G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDY 162 (538)
T KOG0252|consen 89 VNAAALVGTIFGQLFFGWLGDKFGRKKVY------GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDY 162 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhh------hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCC
Confidence 56667789999999999999999999988 6666666666655442 122 356678899999999999
Q ss_pred hhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHH
Q 017754 246 AIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 246 ~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~ 288 (366)
++..+++||.-..+.||+..+.+.....+|.+. |.+++-.+.
T Consensus 163 PlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila-G~ivt~Iv~ 204 (538)
T KOG0252|consen 163 PLSATIMSESANKKTRGAFIAAVFAMQGFGILA-GGIVALIVS 204 (538)
T ss_pred cchHHHhhhhhhhccccceeEEEEEecchhHhh-ccHHHHHHH
Confidence 999999999999999999998888887777773 665544443
No 198
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.50 E-value=1.2e-06 Score=87.80 Aligned_cols=101 Identities=23% Similarity=0.307 Sum_probs=81.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHH--HH--hhhhHHHHHHHHHHHHHHhhhhhhHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY--YA--IGWPGEIYVTTVLVGLSYGAHWAIVP 249 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l--~~--~~~~~~l~~~~~l~G~~~g~~~~~~~ 249 (366)
.++.+.+++++|....|+++|++|||... .+..++..++.++ +. ......+.+++++.|+..|......+
T Consensus 65 ~vs~f~iG~~~Gs~~~~~la~~~GRK~~l------~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~p 138 (485)
T KOG0569|consen 65 IVSIFFIGGMIGSFSSGLLADRFGRKNAL------LLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVP 138 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHH------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHH
Confidence 89999999999999999999999999655 3333333333222 22 34455788999999999999999999
Q ss_pred HHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 250 AAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 250 ~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
.++.|.-|.+.||..-.+..++..+|..+ +.
T Consensus 139 myl~E~sP~~~RG~~g~~~~~~~~~g~ll-~~ 169 (485)
T KOG0569|consen 139 MYLTEISPKNLRGALGTLLQIGVVIGILL-GQ 169 (485)
T ss_pred HHHhhcChhhhccHHHHHHHHHHHHHHHH-HH
Confidence 99999999999999998888888888885 53
No 199
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.48 E-value=2.6e-05 Score=78.72 Aligned_cols=142 Identities=15% Similarity=0.147 Sum_probs=100.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCch-hHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHHHHHHHHHh
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR-PVAMAVAQVVMAFALLYYAI----------GWPGEIYVTTVLVGLSYG 242 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R-~~~~~~~~~~~~~~~~l~~~----------~~~~~l~~~~~l~G~~~g 242 (366)
+.++-.+.-.+..++..++-.+..||..-++ ..-+.++.++.+++++.++. .+.+.+.+..++.++|-.
T Consensus 317 ~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~ 396 (475)
T TIGR00924 317 FQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGEL 396 (475)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5666666666666665554455555422122 22246777777777666542 244567778889999999
Q ss_pred hhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCC
Q 017754 243 AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGS 322 (366)
Q Consensus 243 ~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~ 322 (366)
...+...+++++..|.+.+|..+|+..+...+|..+ ++.+.+...+..+
T Consensus 397 ~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l-~~~~~~~~~~~~~------------------------------ 445 (475)
T TIGR00924 397 MISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLL-GGYLATFGAVPQG------------------------------ 445 (475)
T ss_pred HHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcccc------------------------------
Confidence 999999999999999999999999999999999996 8888877766544
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhh
Q 017754 323 ICYSITCGIMAGLCIIAMVMSLIVVH 348 (366)
Q Consensus 323 ~~~~~~f~i~~~~~~~~~~~~~~~~~ 348 (366)
|...|...++++++..++.+++.+
T Consensus 446 --~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 446 --VTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred --hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777766666655554443
No 200
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.47 E-value=4.5e-06 Score=87.13 Aligned_cols=150 Identities=20% Similarity=0.301 Sum_probs=109.6
Q ss_pred HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHHHHHHHHHHHHHHHHhhh---------hHHH
Q 017754 163 CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMAVAQVVMAFALLYYAIGW---------PGEI 230 (366)
Q Consensus 163 ~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~~~~~~~~~~~~l~~~~~---------~~~l 230 (366)
...+|++.+.+ ....+.....+..+++|+++|++ |+++.. .++.++..+|+.+++... ....
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI------l~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI------LYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH------HHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 34578877654 56666666677888999999986 555444 666677777777765321 1235
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhhCCC---chhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCC
Q 017754 231 YVTTVLVGLSYGAHWAIVPAAASELFGLK---SFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNML 307 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~---~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~ 307 (366)
+++..+..+|.|+.-+...+...|.|..+ .+-..+++..++.++|+++ ++++.+++.+..+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSli-s~~i~~~l~~~~~--------------- 152 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLI-STIITPILRGDVG--------------- 152 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhc---------------
Confidence 56777788888998899999999999754 3778899999999999996 8999998865442
Q ss_pred CcccCCCCCCcccC-CcchHHHHHHHHHHHHHHHHHHHH
Q 017754 308 PVSFRDQETPTCLG-SICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 308 ~~~~~~~~~~~c~g-~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
|.| ..||..+|.+.+++.+++.++.+.
T Consensus 153 -----------~fg~~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 153 -----------CFGCQDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred -----------ccccCcchHHHHHHHHHHHHHHHHHHHH
Confidence 333 236999999988888777665543
No 201
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.43 E-value=2.9e-06 Score=81.74 Aligned_cols=182 Identities=13% Similarity=0.070 Sum_probs=110.7
Q ss_pred CCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCc
Q 017754 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
.++++++++|..|+...+...........-..++... +.+.-+.-+. ..-..++...+|..+.|.++||++.-
T Consensus 261 ~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~---- 336 (464)
T KOG3764|consen 261 TPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHL---- 336 (464)
T ss_pred ccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCch----
Confidence 3577888999888766554433333333344455433 3444222122 22234566788999999999999742
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCC------chhhHHHHHHhhhhhhH
Q 017754 204 RPVAMAVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK------SFGALYNFLTLASPAGS 276 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~------~~g~~~g~~~~~~~~G~ 276 (366)
|-...+.++++.++....... .+...+++-....+++.+...+....+...+...+ .+|..|++...+..+|.
T Consensus 337 ~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~ 416 (464)
T KOG3764|consen 337 RWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAY 416 (464)
T ss_pred hHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhh
Confidence 211123333333332222222 23334555555555555555555444444444333 58999999999999999
Q ss_pred HhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017754 277 LIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 277 ~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
.+ ||.++|.++...| |+|...+++...++-+-+...
T Consensus 417 a~-GP~~gg~iv~~iG--------------------------------F~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 417 AI-GPTFGGSLVEAIG--------------------------------FEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred hc-cccccchheeehh--------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 96 9999999999888 999988888877775544433
No 202
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.43 E-value=4e-06 Score=82.40 Aligned_cols=154 Identities=14% Similarity=0.173 Sum_probs=87.4
Q ss_pred hhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHH
Q 017754 133 LMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA 209 (366)
Q Consensus 133 l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~ 209 (366)
.|++.+|.+...+++..+.........+..+++ .|++.+++ ..+..++...+.+|+.|.++||++.|+.. .+..
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~L---l~~i 80 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHL---LWFI 80 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHH---HHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHH---HHHH
Confidence 367788877666666655555566667777765 89998877 88888899999999999999999976543 1222
Q ss_pred HHHHHHHHHHHHHHhh-h-hHHHHHHH----HHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 210 VAQVVMAFALLYYAIG-W-PGEIYVTT----VLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 210 ~~~~~~~~~~~l~~~~-~-~~~l~~~~----~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
....+....++.+... - ....+++. +..|+++.+..++.=+++.. + .+..+--||=.-+.+.+|-.+ +..+
T Consensus 81 ~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er-~-sr~~~feYG~~R~wGSig~ai-~s~~ 157 (412)
T PF01306_consen 81 AILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAER-V-SRRNGFEYGRARMWGSIGFAI-ASLL 157 (412)
T ss_dssp HHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHH-H-HHHHSS-HHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHH-H-HHHhcCCcchHHHHhhHHHHH-HHHH
Confidence 2222222222222211 0 11122222 22344344434444333322 2 233455566666777777775 7788
Q ss_pred HHHHHhhhh
Q 017754 284 ASGIYDYYA 292 (366)
Q Consensus 284 ~G~l~d~~~ 292 (366)
+|++++...
T Consensus 158 ~G~L~~i~p 166 (412)
T PF01306_consen 158 AGILFNINP 166 (412)
T ss_dssp HHHHHHHHH
T ss_pred hheeeeeCc
Confidence 999987543
No 203
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.42 E-value=5.6e-06 Score=82.14 Aligned_cols=121 Identities=16% Similarity=0.112 Sum_probs=72.2
Q ss_pred HHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hhhHHH
Q 017754 155 VIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GWPGEI 230 (366)
Q Consensus 155 ~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~~~~l 230 (366)
....++.+. +++|++..++ +.+...++..++.+.+|+++||+|||+.. +.++.++.+++..+... .+...+
T Consensus 21 ~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 95 (418)
T TIGR00889 21 WLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKV-----YAVCHFAGALLLFFAAQVTTPAGM 95 (418)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH-----HHHHHHHHHHHHHHHHHhcCHHHH
Confidence 334444444 5589998776 78999999999999999999999763321 23444444444444332 344556
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHh--------hCCCchhhHHHHHHhhhhhhHHhhhhHHHHHH
Q 017754 231 YVTTVLVGLSYGAHWAIVPAAASEL--------FGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~--------f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l 287 (366)
++..++.|++.+...+..-++.... .....+.+.+| .+|..+ ||.++|.+
T Consensus 96 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~i-g~~l~g~l 153 (418)
T TIGR00889 96 FPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIA-AMWAVSLL 153 (418)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHH-HHHHHHHh
Confidence 6666777776665555444332211 11112233333 356664 88888877
No 204
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.41 E-value=3.2e-05 Score=76.53 Aligned_cols=158 Identities=12% Similarity=-0.013 Sum_probs=88.2
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHHHHhhhhhhhhhhh-hhhhhhccCch
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISIWNFLGRVGGGYFS-EAIVRKFAYPR 204 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i~~~~g~~~~G~ls-D~~grr~~~~R 204 (366)
+++.++++.+|...+.+++.......+....|.+.++ +|++.... .......+..++..+.+.+. |+.++|.....
T Consensus 211 ~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 290 (413)
T PRK15403 211 FRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRA 290 (413)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHH
Confidence 4567889999988777766666656666778888876 48887655 22333444555555555433 33322211000
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHHHhhhhhhHHHHHHHhhC-CCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 205 PVAMAVAQVVMAFALLYYAIGWPG-EIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 205 ~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~l~G~~~g~~~~~~~~~~se~f~-~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
.....++.+++.++... ..+.. ..+++.+++++|.+...+...... +.+ ....|++.++.+.....+..+ ++.
T Consensus 291 ~~~~~ig~~l~~~~~~~--~~~~~~~~~~~~~l~~~G~~~~~p~~~~~a--l~~~~~~~G~a~a~~~~~~~~~~~~-~~~ 365 (413)
T PRK15403 291 VPIQLVGLALLIVGNLL--WPHVWLWSVLGTSLYAFGIGLIFPTLFRFT--LFSNNLPKGTVSASLNMVILMVMAV-SVE 365 (413)
T ss_pred HHHHHHHHHHHHHHHHH--ccccHHHHHHHHHHHHHHHHHHhHHHHHHH--hccCCCCCcHHHHHHHHHHHHHHHH-HHH
Confidence 00111222222222111 11222 245666777777777665555322 222 223788888888887777775 888
Q ss_pred HHHHHHhhh
Q 017754 283 IASGIYDYY 291 (366)
Q Consensus 283 l~G~l~d~~ 291 (366)
+.|++++..
T Consensus 366 ~~g~~~~~~ 374 (413)
T PRK15403 366 IGRWLWFNG 374 (413)
T ss_pred HHHHHHHcC
Confidence 888887763
No 205
>PRK11462 putative transporter; Provisional
Probab=98.41 E-value=1.6e-05 Score=79.99 Aligned_cols=132 Identities=11% Similarity=0.022 Sum_probs=88.9
Q ss_pred hcHHHH-HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhh----h-
Q 017754 157 DNLGQI-CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGW----P- 227 (366)
Q Consensus 157 ~~l~~i-~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~----~- 227 (366)
.++..+ ....|.+...+ ...+.-+++.+.-|+.|++|||...|+..+||+++..+..+ ++++.++. .+. .
T Consensus 30 ~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~-~i~~~llf~~p~~s~~~~ 108 (460)
T PRK11462 30 LYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPF-GIVCVLAYSTPDLSMNGK 108 (460)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHH-HHHHHHHHhCCCCCcchH
Confidence 334444 45579887765 77777899999999999999998777666677665544443 44443332 221 1
Q ss_pred -HHHHHHHHHHHHHHhhhhhhHHHHHHHhhC-CCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 228 -GEIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 228 -~~l~~~~~l~G~~~g~~~~~~~~~~se~f~-~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
..+++..+++.+++........++.+|+-. .++|....++-..+..+|..+ ++.+...+...
T Consensus 109 ~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~-~~~~~~plv~~ 172 (460)
T PRK11462 109 MIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGML-STVLMMPLVNL 172 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 123334445677777777777788888876 567999999999888888875 66665555443
No 206
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.38 E-value=1.3e-05 Score=80.86 Aligned_cols=132 Identities=11% Similarity=0.112 Sum_probs=83.5
Q ss_pred HHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-h--h-h
Q 017754 155 VIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-G--W-P 227 (366)
Q Consensus 155 ~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~--~-~ 227 (366)
+..+++.+. +.+|.+...+ ...+.-+++.+..|+.|++|||...|+..+|+++ ..+.+.++++++++.. + . .
T Consensus 25 ~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~i-l~g~i~~~i~~~llf~~p~~~~~ 103 (473)
T PRK10429 25 VYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWI-LIGTLANSVVLFLLFSAHLFEGT 103 (473)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhH-hhhhHHHHHHHHHHHcCCCCCcc
Confidence 334445554 4469987765 7788889999999999999997644444445554 4444555555444332 1 1 1
Q ss_pred H---HHHHHHHHHHHHHhhhhhhHHHHHHHhh-CCCchhhHHHHHHhhhhhhHHhhhhHHHHHHH
Q 017754 228 G---EIYVTTVLVGLSYGAHWAIVPAAASELF-GLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 228 ~---~l~~~~~l~G~~~g~~~~~~~~~~se~f-~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~ 288 (366)
. .+++..++.++++........++.+|+- ..++|....++-.....+|+.+ .+.+...+.
T Consensus 104 ~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~-~~~~~~~~~ 167 (473)
T PRK10429 104 AQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFV-TAGFTLPFV 167 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 1 1223334556666666667778889987 4778999888877777777665 444444443
No 207
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.37 E-value=1.8e-06 Score=85.74 Aligned_cols=164 Identities=17% Similarity=0.234 Sum_probs=109.7
Q ss_pred HHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhh---------
Q 017754 159 LGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWP--------- 227 (366)
Q Consensus 159 l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~--------- 227 (366)
++.+.+.+|.+.... ...+..+++++-.|+.|++|||...|+..+|+ ++.++.++.++++.++....|
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp-~~l~g~i~~~~~~~llf~~~p~~~~~~~~~ 103 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRP-WILIGAILLALSFFLLFSPPPAGLSFTAKL 103 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccce-EeehhhHHHHHHHHHhhccccchhhhhhHH
Confidence 334445579988765 67777899999999999999944333332233 235566666666665543211
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCC-CchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCC
Q 017754 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNM 306 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~ 306 (366)
..+.+..+++.+++........++.+|+.+. ++|....+.-.....+|+.+ ...+.+.+.+..+..+.
T Consensus 104 ~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l-~~~~~~~l~~~~g~~~~---------- 172 (428)
T PF13347_consen 104 VWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLL-ASFLAPILVSWFGGGDT---------- 172 (428)
T ss_pred HHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHH-HHHHhhhhhhhhccCcc----------
Confidence 1234445556667777667777888999874 57999999988888888875 56677777765542110
Q ss_pred CCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 307 LPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 307 ~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
.+.|++..++.+++.+++.++.....++
T Consensus 173 ---------------~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 173 ---------------SNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred ---------------chHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 0139999999888888877777766665
No 208
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.36 E-value=3.8e-10 Score=112.28 Aligned_cols=161 Identities=16% Similarity=0.171 Sum_probs=106.0
Q ss_pred HHhcHHHHHHHhCCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH------hhh--
Q 017754 155 VIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA------IGW-- 226 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~~~~~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~------~~~-- 226 (366)
...+.+++.+..|.+.......+..+...++.+++.++.||+|||+.. ..+..+++++.+.+. ...
T Consensus 272 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~------i~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (451)
T PF00083_consen 272 IFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLL------IIGLLLMAICSLILGIIFFLGVSSSS 345 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccc
Confidence 445567777778877663344455567778888888999999998766 444444444333331 111
Q ss_pred --hHHHHHHHHHHHHHHh-hhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhcc
Q 017754 227 --PGEIYVTTVLVGLSYG-AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYN 303 (366)
Q Consensus 227 --~~~l~~~~~l~G~~~g-~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~ 303 (366)
.....+...+..++++ +..++.+.+++|+||++.|+++.++......+++.+ +|.+...+.+..+
T Consensus 346 ~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i-~~~~~~~~~~~~~----------- 413 (451)
T PF00083_consen 346 WWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFI-IPFLFPYLFNNLG----------- 413 (451)
T ss_pred ccccccceeeeeccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccc-----------
Confidence 1112222222222223 334555678899999999999999999999999986 7877777766554
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhchHHH
Q 017754 304 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRTKSVY 354 (366)
Q Consensus 304 ~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~ 354 (366)
....|.+.+++++++.+....+.++||.+.
T Consensus 414 ---------------------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~ 443 (451)
T PF00083_consen 414 ---------------------GWGVFLIFAGVCLIAIIFVYFFLPETKGKT 443 (451)
T ss_pred ---------------------ccccchhhHHHHHHHHhheeEEEeeCCCCC
Confidence 244566777777777777777788887644
No 209
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.29 E-value=4.7e-05 Score=74.08 Aligned_cols=190 Identities=16% Similarity=0.119 Sum_probs=122.7
Q ss_pred HHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 129 LPQALMKADFLLLFFSLVLASGSGLTVIDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
+++...+++...++...+.+..+..+-...+-+|. +-+|++..++ +..+...+..+|-.+.|++..+-..++ |.
T Consensus 201 ~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~---~~ 277 (403)
T PF03209_consen 201 WRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK---RT 277 (403)
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch---HH
Confidence 34445556555555444444444333333343444 4578887665 888889998899999998766422221 21
Q ss_pred HHHHHHHHHHHHHHHH--HH--hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 206 VAMAVAQVVMAFALLY--YA--IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 206 ~~~~~~~~~~~~~~~l--~~--~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
. ..+..+.++++.+ ++ ..+++.+....+++|++.|....-.-+...++-..++-|...|....+..++..+ +.
T Consensus 278 a--~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Gl-g~ 354 (403)
T PF03209_consen 278 A--ALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGL-GT 354 (403)
T ss_pred H--HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHH-HH
Confidence 1 2333333333333 22 2356678888999999999877777778888888889999999999999999985 88
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 282 ~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.++|.+.|....-.+ + .-...|..+|.+-++..+++..+...+
T Consensus 355 ~~GG~~~D~~~~~~~---------------~-------~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 355 FLGGALRDLVRALFG---------------N-------SPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred HHHHHHHHHHHHhcc---------------C-------CcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999997641110 0 011138999988877666666554433
No 210
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.27 E-value=6.2e-09 Score=103.61 Aligned_cols=103 Identities=21% Similarity=0.278 Sum_probs=88.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHhhhhhhHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-G---WPGEIYVTTVLVGLSYGAHWAIVP 249 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~---~~~~l~~~~~l~G~~~g~~~~~~~ 249 (366)
..+...++..+|.++.|+++||+|||+.+ .++.+++.++.++... . +...+.+++++.|++.|+.....+
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPAL------IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHhhhcccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 77888899999999999999999999887 6777777777776653 3 466788899999999999999999
Q ss_pred HHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHH
Q 017754 250 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVI 283 (366)
Q Consensus 250 ~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l 283 (366)
.++.|..++++||....+......+|..+ +..+
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~-~~~~ 157 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILL-ASLI 157 (451)
T ss_pred ccccccccccccccccccccccccccccc-cccc
Confidence 99999999999999999999988888875 5443
No 211
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.24 E-value=5.9e-06 Score=83.28 Aligned_cols=122 Identities=11% Similarity=0.087 Sum_probs=86.3
Q ss_pred HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH---------h--hhhHHH
Q 017754 164 QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA---------I--GWPGEI 230 (366)
Q Consensus 164 ~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~---------~--~~~~~l 230 (366)
..+|++.... .....+++..+|..+.+++.+|++.|+.. .++.++.+++.+... . .+...+
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l------~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~ 354 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLF------GVTTLLYTLSSLFDLILVKRWNLAFGISDEVFV 354 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHH------HHHHHHHHHHHhCceeeeeccccccCCCCeeee
Confidence 3578887765 55556666666766666665555544333 555555555443321 0 111233
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
....++.+++++..+......+++..|++..|+.+++.+...++|..+ ++.++|.+.+..+
T Consensus 355 ~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v-~~~~gg~l~~~~g 415 (468)
T TIGR00788 355 LGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSV-SGFLGVLLMETIG 415 (468)
T ss_pred eehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 445667788888888888889999999999999999999999999996 9999999998876
No 212
>PRK09848 glucuronide transporter; Provisional
Probab=98.23 E-value=6.8e-05 Score=74.82 Aligned_cols=115 Identities=15% Similarity=0.192 Sum_probs=72.0
Q ss_pred HHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh----h-hHH--H
Q 017754 160 GQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG----W-PGE--I 230 (366)
Q Consensus 160 ~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~----~-~~~--l 230 (366)
.++.+.+|++...+ ..++..++..+..+++|+++||.++|+..+|+++...+..++..+.+++... . ... .
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 34445579987765 7888899999999999999999988777666666555554444444433221 1 111 2
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhhCC-CchhhHHHHHHhhhhh
Q 017754 231 YVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTLASPA 274 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~~~~~ 274 (366)
++..++.+++++...+...++..++... ++|....+.-..+..+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~ 157 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASL 157 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 3334556777776666556666666544 4577665554444333
No 213
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.21 E-value=0.00011 Score=70.32 Aligned_cols=124 Identities=15% Similarity=0.162 Sum_probs=80.3
Q ss_pred HHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 017754 162 ICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGL 239 (366)
Q Consensus 162 i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~ 239 (366)
+.++.|++..++ +...-...+.+..++.|.++||+|||+.. .+..++.+++++.-...+...+++++++-|+
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c------l~~cily~~scl~k~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC------LLFCILYSLSCLTKHSSNYPVLLLGRVLGGI 133 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH------HHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 346789987776 33333445566778889999999998765 5555666666655556677889999999999
Q ss_pred HHhhhhhhHHH-HHHHh----hCCCchhhHHHHHH-hhhhhhHHhhhhHHHHHHHhhhh
Q 017754 240 SYGAHWAIVPA-AASEL----FGLKSFGALYNFLT-LASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 240 ~~g~~~~~~~~-~~se~----f~~~~~g~~~g~~~-~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+....++..-+ ++.|. |+.+..+..++.+. ..+.+-+. .+++++-++.|..+
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI-~aGv~a~~l~~~~~ 191 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAI-GAGVVANVLADWFG 191 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHH-HHhHHHHHHHHHhC
Confidence 98888877766 44554 33333444555444 33333334 35566666666554
No 214
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.21 E-value=0.00019 Score=72.84 Aligned_cols=113 Identities=15% Similarity=0.091 Sum_probs=81.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCc-hhHHHHHHHHHHHHHHHHH-------Hh----hhhHHHHHHHHHHHHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYP-RPVAMAVAQVVMAFALLYY-------AI----GWPGEIYVTTVLVGLSY 241 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~-R~~~~~~~~~~~~~~~~l~-------~~----~~~~~l~~~~~l~G~~~ 241 (366)
+.++..++..+..++.|++.||+++|+.-+ .+.-+.+++++.+++++.+ .. .+.+.+....++.|+|.
T Consensus 314 ~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge 393 (489)
T PRK10207 314 FQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGE 393 (489)
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHH
Confidence 555566677678888899999999886422 2223455666666555422 11 12234556677889999
Q ss_pred hhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHH
Q 017754 242 GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 242 g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l 287 (366)
+...+...+.+.+..|++..|.+.|+.++...+|+.+ |..+++..
T Consensus 394 ~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~l-g~~l~~~~ 438 (489)
T PRK10207 394 LFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLL-GGYVATFT 438 (489)
T ss_pred HHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHh
Confidence 8888888889999999999999999999999999996 77666654
No 215
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.21 E-value=8.2e-05 Score=74.95 Aligned_cols=180 Identities=12% Similarity=0.078 Sum_probs=112.4
Q ss_pred hhHHHHHHHHHHhhhhHHHHHhcHHH-HHHH-hCCCh--------h---HH-HHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 017754 136 ADFLLLFFSLVLASGSGLTVIDNLGQ-ICQS-LGYAD--------T---SI-YVSMISIWNFLGRVGGGYFSEAIVRKFA 201 (366)
Q Consensus 136 ~~~~ll~~~~~~~~~~~~~~~~~l~~-i~~~-~g~s~--------~---~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~ 201 (366)
+.+|.+++..++.+.+...+..+... +.++ ++-++ . .. ...+.++.+.+..++.-++.+++|+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~--- 334 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGA--- 334 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 46788887777777766655444333 3333 33221 1 01 2223333333333444445555542
Q ss_pred CchhHHHHHHHHHHHHHHHHHH-hhh---------------------hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCC-
Q 017754 202 YPRPVAMAVAQVVMAFALLYYA-IGW---------------------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGL- 258 (366)
Q Consensus 202 ~~R~~~~~~~~~~~~~~~~l~~-~~~---------------------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~- 258 (366)
|+....++.++.+++++... ..+ ....++...++|+..+...++-++++++.-+.
T Consensus 335 --~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~ 412 (477)
T TIGR01301 335 --GKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNL 412 (477)
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcccc
Confidence 12222566666666555543 111 14456667778999999889989999999984
Q ss_pred -CchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHH
Q 017754 259 -KSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCI 337 (366)
Q Consensus 259 -~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~ 337 (366)
++.|...|++|++..+...+ ..+..|.+.+..+. .-.+++.+.++..+
T Consensus 413 ~~~~G~~mgilN~~I~lpQii-~sl~~g~~~~~~g~------------------------------~~~~~~~~~gv~~~ 461 (477)
T TIGR01301 413 GAGQGLSMGVLNLAIVIPQII-VSLGSGPWDQLFGG------------------------------GNLPAFVVGAVAAF 461 (477)
T ss_pred CCCCcchhhHHHHHHHHHHHH-HHHHHHHHHHHcCC------------------------------CCeeHHHHHHHHHH
Confidence 56799999999999999987 56677776655551 14567778888888
Q ss_pred HHHHHHHHHhhhch
Q 017754 338 IAMVMSLIVVHRTK 351 (366)
Q Consensus 338 ~~~~~~~~~~~~~r 351 (366)
+++++++++.+|.+
T Consensus 462 ~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 462 VSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHhCCCCC
Confidence 88888888777654
No 216
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.17 E-value=0.00021 Score=72.66 Aligned_cols=153 Identities=15% Similarity=0.130 Sum_probs=101.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhh----------hHHHHHHHHHHHHHHhh
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW----------PGEIYVTTVLVGLSYGA 243 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~----------~~~l~~~~~l~G~~~g~ 243 (366)
+.++..+...+..++.+++-.|.++|.. .+..+.+++++++++++.+.... ...+....++.|+|-+.
T Consensus 321 ~~s~n~i~iil~~p~~~~~~~~l~~r~~--~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 321 YQALNPFWIMIGSPILAAIYNKMGDRLP--MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHhCcCCC--cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 5666666666777777666667666532 34556788888888877755321 23566778889999999
Q ss_pred hhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCC-
Q 017754 244 HWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGS- 322 (366)
Q Consensus 244 ~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~- 322 (366)
..+...+++.+..|++.+|..+|...++..+|+.+ ++.+.+........ ......
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~-~g~~~~~~~~~~~~-----------------------~~~~~~~ 454 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALI-AGYVANLMAVPDNV-----------------------TDPLMSL 454 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccccc-----------------------ccchhhh
Confidence 99999999999999999999999888887777774 55555433211000 000000
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhchH
Q 017754 323 ICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 323 ~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
..|.+.|...++++++.+++.+++.++.+|
T Consensus 455 ~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k 484 (500)
T PRK09584 455 EVYGRVFLQIGIATAVIAVLMLLTAPKLNR 484 (500)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 027888888887777665555554444433
No 217
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.16 E-value=7.6e-05 Score=73.70 Aligned_cols=116 Identities=17% Similarity=0.193 Sum_probs=76.3
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHH
Q 017754 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIY 231 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~ 231 (366)
+...++.+.++.|++..++ ..++..+..+++.+++|+++||.++++.. +.+..++.++..+... ..+...++
T Consensus 21 ~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~-----l~~~~l~~~~~~~~~~~~~~f~~~~ 95 (400)
T PF03825_consen 21 FLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRI-----LALLSLLSALALLLLAFSSSFWWLF 95 (400)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHH-----HHHHHHHHHHHHHHHHHhccHHHHH
Confidence 4456788999999998887 88899999999999999999998654332 2344444444333333 33445556
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHH
Q 017754 232 VTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 232 ~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
+..+++.+++....++.-++.-+..+ +.+.-||-+-+.+.+|=.
T Consensus 96 ~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~ 139 (400)
T PF03825_consen 96 VIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFI 139 (400)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHH
Confidence 66666777777777777777766654 334444444444444444
No 218
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.12 E-value=3.8e-05 Score=78.28 Aligned_cols=181 Identities=17% Similarity=0.165 Sum_probs=110.2
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChh-HHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHH
Q 017754 135 KADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADT-SIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQV 213 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~-~~~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~ 213 (366)
++.++...+..+..........++.+++.+..|.+.. .....+.++.++++..++.++.||+|||+.. ..+..
T Consensus 294 ~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll------l~s~~ 367 (513)
T KOG0254|consen 294 KRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLL------LFGAA 367 (513)
T ss_pred HHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH------HHhHH
Confidence 3344444444444444444566788899999998755 4456666777888888889999999998765 56666
Q ss_pred HHHHHHHHHHhh-----h--------hHHHHHHHHH-HHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhh
Q 017754 214 VMAFALLYYAIG-----W--------PGEIYVTTVL-VGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 214 ~~~~~~~l~~~~-----~--------~~~l~~~~~l-~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
.+.++.++++.. . .....+...+ +.....+..++.+.+.+|.||.+.|+.+.++....+.+.+++.
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v 447 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI 447 (513)
T ss_pred HHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH
Confidence 666665554411 0 0111122222 2222223345556688999999999999999888777666642
Q ss_pred hhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHH-HHHHHhhhchHHH
Q 017754 280 SGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMV-MSLIVVHRTKSVY 354 (366)
Q Consensus 280 gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~-~~~~~~~~~r~~~ 354 (366)
...+....... .....|...++++.+..+ ...++.+++|.+.
T Consensus 448 -----~~~~~~~~~~~----------------------------~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~s 490 (513)
T KOG0254|consen 448 -----SFFFPFITEAL----------------------------GIGGTFGYFGGICLLSLIIFVFFFVPETKGLT 490 (513)
T ss_pred -----HHHHHHHHHhc----------------------------cccchHHHHHHHHHHHHHHHheEEcccCCCCc
Confidence 22222221000 024566777777777766 5667777877644
No 219
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.07 E-value=3.3e-05 Score=77.12 Aligned_cols=176 Identities=19% Similarity=0.208 Sum_probs=117.1
Q ss_pred HHhhhhhHHHHH-HHHHHhhhhHHHHHhcHHHHHHHhCCChhHH-HHHHH-HHHHhhhhhhhhhhhhhhhhhccCchhHH
Q 017754 131 QALMKADFLLLF-FSLVLASGSGLTVIDNLGQICQSLGYADTSI-YVSMI-SIWNFLGRVGGGYFSEAIVRKFAYPRPVA 207 (366)
Q Consensus 131 ~~l~~~~~~ll~-~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~-~vsl~-~i~~~~g~~~~G~lsD~~grr~~~~R~~~ 207 (366)
+++.+++..+++ ++.+++.+.++ +.+++=-.+++.|-.+.-. .++.. ..+-++.-++.+++.+++|+-+.+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~l-v~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~----- 439 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGL-VFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM----- 439 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHH-HHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee-----
Confidence 344555444333 33333333333 3344545667776332211 22222 223344455677888888887665
Q ss_pred HHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHh-hhhhhHHhhhhHHHH
Q 017754 208 MAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTL-ASPAGSLIFSGVIAS 285 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~-~~~~G~~i~gp~l~G 285 (366)
..++....+=++.+. ..+++..+..=++.|+..+..|+.+.++++...|++-++++.+++.. .-.+|--+ |.+|+|
T Consensus 440 -~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~-GslIGG 517 (618)
T KOG3762|consen 440 -YLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGL-GSLIGG 517 (618)
T ss_pred -eehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcch-hhhhhh
Confidence 566666555555555 56777777788999999999999999999999999999999998754 45677774 888899
Q ss_pred HHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 017754 286 GIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIV 346 (366)
Q Consensus 286 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~ 346 (366)
.+..+.+ -+.+|.+.++.|++.++..+.+
T Consensus 518 ~~v~~fg--------------------------------~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 518 FVVERFG--------------------------------ARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hhheeeh--------------------------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 9988877 5778888887777766554443
No 220
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.07 E-value=0.00012 Score=71.25 Aligned_cols=128 Identities=16% Similarity=0.071 Sum_probs=90.8
Q ss_pred HHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-----hhh--------h
Q 017754 163 CQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-----IGW--------P 227 (366)
Q Consensus 163 ~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-----~~~--------~ 227 (366)
..+++.+..-. .+++..+... .|+.+|+.||+...-..++|..++..+.++.+.+..+.. ... .
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 34566654332 5666665544 699999999998744455565566666666555444322 111 1
Q ss_pred --H--HHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 228 --G--EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 228 --~--~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+ ...+...++|+|.+...+...+.++|.-++++|+...+++....-+|..+ +.++.|.+.|.+.
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv-~ai~~g~lL~~~s 153 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIV-SAIVFGRLLDPFS 153 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHH-HHHHHHHHccccC
Confidence 1 23345567788888877888899999999999999999999998888886 8999998888765
No 221
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.05 E-value=4e-05 Score=75.13 Aligned_cols=157 Identities=14% Similarity=0.104 Sum_probs=101.0
Q ss_pred CCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCch
Q 017754 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPR 204 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R 204 (366)
.++++.+++.+|.++.+++..+.+........+-+.+..-||+...+ ...+..+++.+|.++.|.+.||...-+..
T Consensus 257 ~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~-- 334 (480)
T KOG2563|consen 257 KSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLT-- 334 (480)
T ss_pred HHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHH--
Confidence 35778899999999988887777766666665555556668885333 66667778899999999999998543322
Q ss_pred hHHHHHHHHHHHHH-HHHHHh----hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhh
Q 017754 205 PVAMAVAQVVMAFA-LLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIF 279 (366)
Q Consensus 205 ~~~~~~~~~~~~~~-~~l~~~----~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~ 279 (366)
+.+......++ ..++.. .....++....+.|++.-+..++..-+..|.--+..=++..|++++.+.+-+.++
T Consensus 335 ---~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~ 411 (480)
T KOG2563|consen 335 ---TLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVIL 411 (480)
T ss_pred ---HHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHH
Confidence 12222222222 222211 2234566777788888888888777777776555666777888777666555542
Q ss_pred hhHHHHHHHh
Q 017754 280 SGVIASGIYD 289 (366)
Q Consensus 280 gp~l~G~l~d 289 (366)
..+.+...+
T Consensus 412 -~~~~~~~~~ 420 (480)
T KOG2563|consen 412 -VFIMGILAE 420 (480)
T ss_pred -HHHHHHHhh
Confidence 444444433
No 222
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.04 E-value=0.00018 Score=66.29 Aligned_cols=127 Identities=16% Similarity=0.119 Sum_probs=82.3
Q ss_pred hhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH--
Q 017754 148 ASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-- 223 (366)
Q Consensus 148 ~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-- 223 (366)
..+..+.+..+-|++-+.+|++.++. +.+.-.++..+| +..|.+.|+++.+... .++.+...+|+.++.
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l------~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVL------LIGAVLGFVGYGLLWLA 86 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHH------HHHHHHHHHHHHHHHHH
Confidence 34556677788899999999998876 444445666664 8889999999865443 667777777766643
Q ss_pred hhh----hH--HHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhH
Q 017754 224 IGW----PG--EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGV 282 (366)
Q Consensus 224 ~~~----~~--~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~ 282 (366)
... +. .+.+...+.|.+.....+....+..+.|| ++||++.|+.-....+++.+++.+
T Consensus 87 ~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i 150 (250)
T PF06813_consen 87 VSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQI 150 (250)
T ss_pred HhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHH
Confidence 111 11 22222233333332222333445568896 689999999999988888876543
No 223
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.01 E-value=0.00021 Score=71.23 Aligned_cols=136 Identities=15% Similarity=0.133 Sum_probs=98.9
Q ss_pred HhcHHHHH-HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhh----hH
Q 017754 156 IDNLGQIC-QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW----PG 228 (366)
Q Consensus 156 ~~~l~~i~-~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~----~~ 228 (366)
..++..+. ...|.+...+ ...+.-++.++.-|+.|.++||..+|+...||+++..+..+..+..+.+..++ ..
T Consensus 32 ~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k 111 (467)
T COG2211 32 VLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGK 111 (467)
T ss_pred HHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcc
Confidence 34445544 4478887765 66667789999999999999999888888888887777777666666655432 11
Q ss_pred --HHHHHHHHHHHHHhhhhhhHHHHHHHhhC-CCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 229 --EIYVTTVLVGLSYGAHWAIVPAAASELFG-LKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 229 --~l~~~~~l~G~~~g~~~~~~~~~~se~f~-~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
..++...+.++++........++.+++-. +++|....+.=.....+|.++ ...+.+.+....+
T Consensus 112 ~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l-~~~~~~plv~~~g 177 (467)
T COG2211 112 LIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLL-VAVLFPPLVKLFG 177 (467)
T ss_pred hHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhC
Confidence 33455667788888888777888888764 456999999888888888776 4556666665554
No 224
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.97 E-value=0.00071 Score=61.35 Aligned_cols=129 Identities=17% Similarity=0.202 Sum_probs=88.8
Q ss_pred HHhcHHHHHHHhCCCh----hHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhh--h
Q 017754 155 VIDNLGQICQSLGYAD----TSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGW--P 227 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~----~~~~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~--~ 227 (366)
.....+.+..+.+.+. .....+...+...++.+..|.++||+|||+.. ..+......+.++.. ... .
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL------IIGLLLFLLGTLLLALAPNVGL 94 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH------HHHHHHHHHHHHHHHhCccchH
Confidence 3345666666665554 23377778888888889999999999887322 333322233323322 222 4
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCC-CchhhHHHHHHh-hhhhhHHhhhhHHHHHHHhh
Q 017754 228 GEIYVTTVLVGLSYGAHWAIVPAAASELFGL-KSFGALYNFLTL-ASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 228 ~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~-~~~g~~~g~~~~-~~~~G~~i~gp~l~G~l~d~ 290 (366)
..+++..+..|++.+...+...++++|.++. ++++...+.... ...+|..+ +|.+++.+.+.
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLAL-GPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4566667778888888888889999999987 678888888888 56777775 88888887776
No 225
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.96 E-value=6.5e-05 Score=75.35 Aligned_cols=131 Identities=15% Similarity=0.175 Sum_probs=93.5
Q ss_pred HHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH--HHhhhhhhHHHHHHHhh
Q 017754 179 SIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGL--SYGAHWAIVPAAASELF 256 (366)
Q Consensus 179 ~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~--~~g~~~~~~~~~~se~f 256 (366)
.+..++-.++.|.+||++|||... ........+.-+...... ++..++.++ ++++.++...++++|.-
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L------~~~~~~~~l~~~~~~~~~----~~~~~~~~l~g~~~~~~s~~~a~vadis 141 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVL------LLPLFGTILPALCLLFQG----YWFFLLLGLSGGFSAIFSVGFAYVADIS 141 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhH------HHHHHHHHHhHHHHHHHH----HHHhhhcccccchhhhhhhhhhheeecc
Confidence 566778889999999999998765 222222222222222211 222224433 24566677788999999
Q ss_pred CCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHH
Q 017754 257 GLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLC 336 (366)
Q Consensus 257 ~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~ 336 (366)
..++|...+|+++.....+..+ +|.+++++....+ +...|++.++..
T Consensus 142 ~~~~R~~~~gll~~~~~~~~~~-~p~~~~~~~~~~~--------------------------------~a~~f~ia~~~~ 188 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGLVI-GPALGGYLVKFLG--------------------------------IALVFLIAAASG 188 (463)
T ss_pred chhHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHhcC--------------------------------chHHHHHHHHHH
Confidence 9999999999999988899886 9999999988765 888999988888
Q ss_pred HHHHHHHHHHhhhchH
Q 017754 337 IIAMVMSLIVVHRTKS 352 (366)
Q Consensus 337 ~~~~~~~~~~~~~~r~ 352 (366)
+++.+-.++..+++..
T Consensus 189 ~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 189 ILSLLYMLLFLPESLQ 204 (463)
T ss_pred HHHHHHHhhccccccC
Confidence 8887777776666443
No 226
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.95 E-value=0.0011 Score=67.57 Aligned_cols=101 Identities=12% Similarity=0.134 Sum_probs=71.2
Q ss_pred HHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hh-hH--HHHHHHHHHHHHHhhhhhhHHHHHHHhh
Q 017754 181 WNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GW-PG--EIYVTTVLVGLSYGAHWAIVPAAASELF 256 (366)
Q Consensus 181 ~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~-~~--~l~~~~~l~G~~~g~~~~~~~~~~se~f 256 (366)
....+....+...|++|||... ..+..+..++++.++. .. .. ...+...+..++.+..+...+...+|++
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~ 435 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPL------FLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELI 435 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHH------HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4444555668888999887655 7777777777777653 22 12 2233333444556666777788999999
Q ss_pred CCCchhhHHHHHHhhhhhhHHhhhhHHHHHHH
Q 017754 257 GLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 257 ~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~ 288 (366)
|+..|..+.+...+...+|+.+ +|.+.-...
T Consensus 436 pt~~r~~~~~~~~~~~~~~~i~-ap~~~~~~~ 466 (521)
T KOG0255|consen 436 PTVVRNTAVGAISAAARLGSIL-APLFPLLLR 466 (521)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHh
Confidence 9999999999999999999995 787664443
No 227
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.88 E-value=0.0014 Score=67.66 Aligned_cols=156 Identities=15% Similarity=0.057 Sum_probs=97.9
Q ss_pred HHHHhhh-hhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChh---H--HHHHHHHHHHhhhhhhhhhhhhhhhhhcc
Q 017754 129 LPQALMK-ADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADT---S--IYVSMISIWNFLGRVGGGYFSEAIVRKFA 201 (366)
Q Consensus 129 ~~~~l~~-~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~---~--~~vsl~~i~~~~g~~~~G~lsD~~grr~~ 201 (366)
..+++++ +.|+...+..++.....+......|+.... ++-+.. . ......+++..+|.++.|.+.-+++|-
T Consensus 302 P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~-- 379 (599)
T PF06609_consen 302 PHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI-- 379 (599)
T ss_pred CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch--
Confidence 4567776 456666555555544455555666666544 443321 1 245566777788888888887666432
Q ss_pred CchhHHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHh
Q 017754 202 YPRPVAMAVAQVVMAFALLYYA---IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLI 278 (366)
Q Consensus 202 ~~R~~~~~~~~~~~~~~~~l~~---~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i 278 (366)
| +.+.++.+++.+++-+++ ..+....+...++.|++.|....+....+.-..|.++.|++.++....-.+|+.+
T Consensus 380 --K-w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsI 456 (599)
T PF06609_consen 380 --K-WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSI 456 (599)
T ss_pred --h-HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHH
Confidence 2 233444555554433443 2334455667778888888766555555555667788999999999998888886
Q ss_pred hhhHHHHHHHhh
Q 017754 279 FSGVIASGIYDY 290 (366)
Q Consensus 279 ~gp~l~G~l~d~ 290 (366)
|.-+...++..
T Consensus 457 -g~aIy~~I~~n 467 (599)
T PF06609_consen 457 -GYAIYNAIFTN 467 (599)
T ss_pred -HHHHHHHHHHh
Confidence 76666665543
No 228
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.76 E-value=0.00068 Score=65.20 Aligned_cols=133 Identities=13% Similarity=0.088 Sum_probs=91.6
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
+......+..+|...+|.++|++|||+.. ....++.++.-.+-. .++...+.+...+.|+|.|+ .+...++-
T Consensus 118 lt~~v~~gmllga~~w~l~~d~~grr~~f------~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~y 190 (528)
T KOG0253|consen 118 LTLSVFLGMLVGAMVWGLSADTIGRRKGF------NLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIY 190 (528)
T ss_pred HHHHHHhhhhhhhhhhheehhhhhcchhh------hhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHH
Confidence 44555567778999999999999999877 444444443333322 34556788888899999988 77777788
Q ss_pred HHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHH
Q 017754 253 SELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIM 332 (366)
Q Consensus 253 se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~ 332 (366)
.|..|..+++.-.=.. ..+.+|..+ ...++=......| ||+-...+
T Consensus 191 le~lp~~~r~~~~V~~-~~waig~v~-ea~law~vm~~~g--------------------------------wr~~l~~~ 236 (528)
T KOG0253|consen 191 LEFLPSSHRWLLTVMS-FFWAIGQVF-EALLAWGVMSNFG--------------------------------WRYLLFTS 236 (528)
T ss_pred HHhccCcCCCcchhHH-HHHHHHHHH-HHHHHHHHHHhhh--------------------------------HHHHHHHH
Confidence 8888888887766555 777888874 5555544455555 88877766
Q ss_pred HHHHHHHHHHHHHHh
Q 017754 333 AGLCIIAMVMSLIVV 347 (366)
Q Consensus 333 ~~~~~~~~~~~~~~~ 347 (366)
..-..+.+..+.++.
T Consensus 237 ~~pl~~~a~f~~w~~ 251 (528)
T KOG0253|consen 237 STPLMFAARFLVWVY 251 (528)
T ss_pred HhHHHHHHHHHhhcc
Confidence 655555555555543
No 229
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.75 E-value=0.00066 Score=67.78 Aligned_cols=158 Identities=19% Similarity=0.215 Sum_probs=103.9
Q ss_pred cHHHHHHHhCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-h----hhHHHH
Q 017754 158 NLGQICQSLGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-G----WPGEIY 231 (366)
Q Consensus 158 ~l~~i~~~~g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~----~~~~l~ 231 (366)
..+.+-+++|.+.++. ......-......++.|.+||-+-- ..++|+..+.++.++.+++.+.++. + +.....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi-~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPI-FGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccc-cCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 3455567799998765 3333333445678999999999732 2334555556666665444444431 1 223344
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhhCC--CchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCc
Q 017754 232 VTTVLVGLSYGAHWAIVPAAASELFGL--KSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPV 309 (366)
Q Consensus 232 ~~~~l~G~~~g~~~~~~~~~~se~f~~--~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~ 309 (366)
+..++..+|+...-.+.-+.+.|.-.. +.+|...+.......+|+++ +..+.|.+.+..+
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv-~~~l~G~l~~~~~----------------- 152 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLV-GSLLSGPLLDSFG----------------- 152 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHH-HHHhhhhhhhcCC-----------------
Confidence 455566677777777777788887632 23778888888888899996 8889999988876
Q ss_pred ccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 310 SFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 310 ~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
++..|.+.+++..+..+..+.+..+
T Consensus 153 ---------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 153 ---------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred ---------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 6777888777777766666665554
No 230
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.74 E-value=0.0012 Score=69.24 Aligned_cols=72 Identities=15% Similarity=0.238 Sum_probs=58.4
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHH-HHhhhhhhhhhhhhhhhhh
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISI-WNFLGRVGGGYFSEAIVRK 199 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i-~~~~g~~~~G~lsD~~grr 199 (366)
.++++++++.+|...+..++.......+..++|.+.++ +|++...+ +.++..+ +..+|.+++|+++||++.+
T Consensus 322 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 322 IIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 36678999999999988888888888899999999875 79887765 4445554 5678999999999999754
No 231
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.64 E-value=0.00064 Score=68.08 Aligned_cols=186 Identities=17% Similarity=0.114 Sum_probs=116.8
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCC--hhH--HHHHHHHHHHhhhhhhhhhhhhhhhh-hccCchhHHHHHHH
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGYA--DTS--IYVSMISIWNFLGRVGGGYFSEAIVR-KFAYPRPVAMAVAQ 212 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s--~~~--~~vsl~~i~~~~g~~~~G~lsD~~gr-r~~~~R~~~~~~~~ 212 (366)
.|+..+..++.......+....-++.+++.-+ .+. ..++..+++..++.+..|+-+.|.+. |+.+ .++.
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl------i~s~ 109 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL------IVSF 109 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH------HHHH
Confidence 45554444444443333333444566664333 222 27888899999999999999988874 3333 7788
Q ss_pred HHHHHHHHHHH-h----h-hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHH
Q 017754 213 VVMAFALLYYA-I----G-WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASG 286 (366)
Q Consensus 213 ~~~~~~~~l~~-~----~-~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~ 286 (366)
+++++|++++. . . ..+.+++++++.|+|.|. .+..=+++++---.+.|.++++..+.+..+|..+ ||.+...
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~il-Gp~~q~~ 187 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIIL-GPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHH-hHHHHHH
Confidence 88888888862 2 2 345778899999999776 4667788888777778888887777766666664 6654433
Q ss_pred HHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhhc
Q 017754 287 IYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHRT 350 (366)
Q Consensus 287 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 350 (366)
+. .-+.+.- .- ..-.-=+-|...-|+++.++++.++...+..++.
T Consensus 188 f~-~Lg~~G~------~i------------~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 188 FT-PLGEKGF------MI------------LPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred Hh-hhcCCce------EE------------cCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 22 1111100 00 0000012377788899989988888777766553
No 232
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.61 E-value=0.00011 Score=72.31 Aligned_cols=138 Identities=17% Similarity=0.146 Sum_probs=78.8
Q ss_pred HHHhcHHHHHH----HhCCChhH--HHHHHHHHHHhhhhhhhhhhhhhhhhhccC-ch----hHHHHHHHHHHHHHHHHH
Q 017754 154 TVIDNLGQICQ----SLGYADTS--IYVSMISIWNFLGRVGGGYFSEAIVRKFAY-PR----PVAMAVAQVVMAFALLYY 222 (366)
Q Consensus 154 ~~~~~l~~i~~----~~g~s~~~--~~vsl~~i~~~~g~~~~G~lsD~~grr~~~-~R----~~~~~~~~~~~~~~~~l~ 222 (366)
++..|.|.+.. -.|++... ++..+.-.++.+|.+.+|.++|++.|+..- .| ......+..+.+....++
T Consensus 262 s~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~ 341 (493)
T KOG1330|consen 262 SLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLF 341 (493)
T ss_pred ccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHH
Confidence 34455555442 23544332 388888899999999999999998773211 01 111112222222222222
Q ss_pred HhhhhHHHHHHHHH--HHHH-HhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhh-hHHhhhhHHHHHHHhhhh
Q 017754 223 AIGWPGEIYVTTVL--VGLS-YGAHWAIVPAAASELFGLKSFGALYNFLTLASPA-GSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 223 ~~~~~~~l~~~~~l--~G~~-~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~-G~~i~gp~l~G~l~d~~~ 292 (366)
.......++.+.++ +|.. .-..++....+..+..++++|.+++++..+...+ |.+ -+|++.|.+.|+--
T Consensus 342 ~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~-~~p~ivGilsd~l~ 414 (493)
T KOG1330|consen 342 PAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDA-ASPYIVGILSDKLR 414 (493)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccC-CCcceehhHHHHhh
Confidence 22112233333333 3332 1223455555778888999999999998776655 555 36779999998753
No 233
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.45 E-value=0.005 Score=52.56 Aligned_cols=108 Identities=7% Similarity=0.055 Sum_probs=78.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAAS 253 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~s 253 (366)
-.++......+..++.+.+.+++|.|+.+ .++.+...+-...+...+...++.+.++.|++.+..|+....++.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm------~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt 115 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSM------ILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLT 115 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHH------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHH
Confidence 45555566667777788888999887665 555555444333333456678899999999999999999999999
Q ss_pred HhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHH
Q 017754 254 ELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY 288 (366)
Q Consensus 254 e~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~ 288 (366)
+....+.+++..++.......+..+ |.++.-.++
T Consensus 116 ~~s~~~~~~~~~~ifw~i~~~s~i~-G~~~~~~~~ 149 (156)
T PF05978_consen 116 SYSTEETIGRNTGIFWAIFQSSLIF-GNLFLFFIF 149 (156)
T ss_pred HcCCHHHHhhHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 9888888888888877777766663 655544443
No 234
>PRK03612 spermidine synthase; Provisional
Probab=97.39 E-value=0.035 Score=56.78 Aligned_cols=123 Identities=19% Similarity=0.209 Sum_probs=65.0
Q ss_pred HhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhh----hHHHHHHHHHH
Q 017754 165 SLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGW----PGEIYVTTVLV 237 (366)
Q Consensus 165 ~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~----~~~l~~~~~l~ 237 (366)
-+|.+.... .++++..+..+|..++|++.++..++... .-+.++++......++.. ... ...++...++.
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~---~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVA---VELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346554433 78888888888888887776433332211 000111111111111111 111 11223444556
Q ss_pred HHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHh-hhh
Q 017754 238 GLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD-YYA 292 (366)
Q Consensus 238 G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d-~~~ 292 (366)
++..|+.+++..-+..+.. .++.|...|-++....+|+.+ |.+++|++.- ..|
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~-G~l~~~~vLlp~lG 174 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALV-GGLAFPFLLLPRLG 174 (521)
T ss_pred HHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHH-HHHHHHHHHHHhcc
Confidence 7778887776655444322 234566777778888888885 8888887654 444
No 235
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.38 E-value=0.046 Score=55.51 Aligned_cols=118 Identities=14% Similarity=0.082 Sum_probs=78.2
Q ss_pred CCChhH-HHHHHHHHHHhhhhhhhhhhhhhhhhh-ccCchhHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHH
Q 017754 167 GYADTS-IYVSMISIWNFLGRVGGGYFSEAIVRK-FAYPRPVAMAVAQVVMAFALLYYAI----------GWPGEIYVTT 234 (366)
Q Consensus 167 g~s~~~-~~vsl~~i~~~~g~~~~G~lsD~~grr-~~~~R~~~~~~~~~~~~~~~~l~~~----------~~~~~l~~~~ 234 (366)
|++-.. .+.++-.++-.+..|+.+++=.+..+| +....+.=+.+++++++++++++.. .++.++.+..
T Consensus 305 g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~ 384 (493)
T PRK15462 305 GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGL 384 (493)
T ss_pred ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHH
Confidence 554333 377888888888888777775666432 2222233357788888888766531 1234556666
Q ss_pred HHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhh-hhhHHhhhhHHHH
Q 017754 235 VLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLAS-PAGSLIFSGVIAS 285 (366)
Q Consensus 235 ~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~-~~G~~i~gp~l~G 285 (366)
++.++|--...++..+.++++.|.+.+|..+|...+.. .+|..+ +..+++
T Consensus 385 ~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~-~g~~~~ 435 (493)
T PRK15462 385 AVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYL-AGVIAD 435 (493)
T ss_pred HHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 77788877777888999999999999999999986633 455553 444444
No 236
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.29 E-value=0.023 Score=57.47 Aligned_cols=145 Identities=11% Similarity=0.010 Sum_probs=88.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh--hhhHHHH-HHHHHHHHHHhhhhhhHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI--GWPGEIY-VTTVLVGLSYGAHWAIVPA 250 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~--~~~~~l~-~~~~l~G~~~g~~~~~~~~ 250 (366)
..++..+...+-.|+.|.++|+-++|+.+ +.+..++..++.+++.. +..+.+. +..++.-++++.......+
T Consensus 75 ~~sis~l~~all~P~lGa~aD~~~~Rk~~-----l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 75 ANSISGLLQALLAPFLGAIADYGGRRKRF-----LLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchHH-----HHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677777888889999999998876543 33333333333333332 2222222 2223334567777788889
Q ss_pred HHHHhhCCCch--------------------------hhHHHHHHhhhhhhHHhhhhHHHHHHH-hhhhhhhhhhhhhcc
Q 017754 251 AASELFGLKSF--------------------------GALYNFLTLASPAGSLIFSGVIASGIY-DYYAEKQAGLLWKYN 303 (366)
Q Consensus 251 ~~se~f~~~~~--------------------------g~~~g~~~~~~~~G~~i~gp~l~G~l~-d~~~~~~~~~~~~~~ 303 (366)
+.+|+-..+.+ +...|.....+.+|+.+ . ++...+. ...+..
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v-~-l~i~l~~~~~~~~~--------- 218 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLV-A-LLISLLLVISPGST--------- 218 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHH-H-HHHHHHHHHcCCCc---------
Confidence 99999998888 88999888888888885 2 3333222 222100
Q ss_pred CCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 304 GNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 304 ~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
=.+..+.|.++.+.++..++..+..++..++
T Consensus 219 ---------------~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~ 249 (477)
T PF11700_consen 219 ---------------ASNTWAIRVAFLIVALWWLVFSIPLFLWLPD 249 (477)
T ss_pred ---------------cccchhhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 0111237888888887776666655554443
No 237
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.22 E-value=0.0017 Score=63.35 Aligned_cols=104 Identities=16% Similarity=0.280 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHHh---h-hh------HHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCC---chhhHHHHHHhhhhh
Q 017754 208 MAVAQVVMAFALLYYAI---G-WP------GEIYVTTVLVGLSYGAHWAIVPAAASELFGLK---SFGALYNFLTLASPA 274 (366)
Q Consensus 208 ~~~~~~~~~~~~~l~~~---~-~~------~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~---~~g~~~g~~~~~~~~ 274 (366)
+.++.+++.+|++++.. . .. ..++++..++++|.|+.=+...+..+|.|..+ ++...++....+.++
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~ 83 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI 83 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh
Confidence 46677788888887431 1 11 36788999999999999999999999999876 377889999999999
Q ss_pred hHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017754 275 GSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 275 G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~ 344 (366)
|+++ ++.+.+++.++.+ |...|.+.++..+++.+..+
T Consensus 84 G~~~-~~~~~~~i~~~~~--------------------------------~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 84 GSLF-SPTLVPYIQQNYG--------------------------------WFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHH-HHHCCCHHHHCS---------------------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred hhHh-hcccchhhccccc--------------------------------hhhhhhHHHHHHHHHHHHHH
Confidence 9996 8999999988776 99999998877777665443
No 238
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.18 E-value=0.0018 Score=48.41 Aligned_cols=53 Identities=13% Similarity=0.160 Sum_probs=43.4
Q ss_pred hhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017754 150 GSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 150 ~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
+....+..++|.+.++.|++..++ ..++..+...++.+++|+++||+++++..
T Consensus 14 ~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 14 AALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred HHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 333345677888889999998887 78888899999999999999999986544
No 239
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.14 E-value=0.0032 Score=60.85 Aligned_cols=123 Identities=11% Similarity=0.115 Sum_probs=85.0
Q ss_pred HHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHH
Q 017754 164 QSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLS 240 (366)
Q Consensus 164 ~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~ 240 (366)
..+||++.+. +.+..++...+.+.......|+... .-...+...+.++...++++. ...+..++.+..+..++
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~----~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~ 365 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKG----NIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFS 365 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhcccccccccc----chhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHH
Confidence 4578887665 5555555555555555555555431 111223444444444444444 34566788888888888
Q ss_pred HhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhh
Q 017754 241 YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYY 291 (366)
Q Consensus 241 ~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~ 291 (366)
.....+.....+....|.+.+|++.|+....+.++-++ ||.++|.+....
T Consensus 366 ~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRai-GPlv~g~i~~Ws 415 (451)
T KOG2615|consen 366 TASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAI-GPLVSGVIFSWS 415 (451)
T ss_pred HHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHh-hhhhhheeEEEe
Confidence 77766777778888899999999999999999999996 999999887654
No 240
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.83 E-value=0.001 Score=61.82 Aligned_cols=149 Identities=15% Similarity=0.131 Sum_probs=98.7
Q ss_pred hHHHHHHHHHHhhhhHHHHHhcHHHHHHHh----CCChhHH--HHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHH
Q 017754 137 DFLLLFFSLVLASGSGLTVIDNLGQICQSL----GYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMA 209 (366)
Q Consensus 137 ~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~----g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~ 209 (366)
+|..+.++.+.+.++...+. +-..+-.++ ..+.+.. +-+.++--|.+-..++|++.||. |.|... .
T Consensus 42 r~m~lv~mc~lgfgsyfcyd-~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gt------i 114 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCYD-APGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGT------I 114 (459)
T ss_pred HHHHHHHHHHhcccceeecC-CchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHH------H
Confidence 45555555555555443332 222222222 2233222 56777777888899999999974 554433 3
Q ss_pred HHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHH
Q 017754 210 VAQVVMAFALLYYAI----GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 210 ~~~~~~~~~~~l~~~----~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G 285 (366)
+..++..+|.++++. ...+.+..+++++|+|.-..-.....++.-.|..|+.+..+|+......+|+.+ .=.+.+
T Consensus 115 i~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv-Nf~lm~ 193 (459)
T KOG4686|consen 115 ILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV-NFLLMP 193 (459)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee-eeeecH
Confidence 334444556666553 233567889999998865555555667888899999999999999999999986 778899
Q ss_pred HHHhhhhh
Q 017754 286 GIYDYYAE 293 (366)
Q Consensus 286 ~l~d~~~~ 293 (366)
++||..++
T Consensus 194 ~ly~~~~~ 201 (459)
T KOG4686|consen 194 FLYDTMGR 201 (459)
T ss_pred HHHHHHHH
Confidence 99998763
No 241
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.62 E-value=0.021 Score=54.30 Aligned_cols=64 Identities=5% Similarity=-0.052 Sum_probs=56.7
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 226 WPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 226 ~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
+...+.++.++.|.|.+...+...++++++.++++++...|+....+.+|+.+ ||.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~-gP~i~~~~i~~ 72 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTV-APLFGGSLILS 72 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHH-HHHHHHHHHhc
Confidence 34456778888999999999999999999999999999999999999999996 99999988854
No 242
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.61 E-value=0.00051 Score=70.47 Aligned_cols=71 Identities=23% Similarity=0.251 Sum_probs=0.0
Q ss_pred CCHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHH-HHhhhhhhhhhhhhhhh
Q 017754 127 FTLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISI-WNFLGRVGGGYFSEAIV 197 (366)
Q Consensus 127 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i-~~~~g~~~~G~lsD~~g 197 (366)
..++++++|+.|....++..+-.....++..++|.+.+. ++.+.+.+ +.....+ +.++|.+++|++..|+.
T Consensus 296 ~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~k 370 (539)
T PF03137_consen 296 KALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFK 370 (539)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEec
Confidence 457889999999888888777777777888999999875 78776554 4444444 66789999999988874
No 243
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.51 E-value=0.27 Score=48.46 Aligned_cols=103 Identities=20% Similarity=0.212 Sum_probs=71.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHHhhhhhhHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA----IGWPGEIYVTTVLVGLSYGAHWAIVP 249 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~----~~~~~~l~~~~~l~G~~~g~~~~~~~ 249 (366)
+..++.++-+++|--.-.+ | .+|.+.+.+.+.+..+.+++-+ .++.+.+++..+..|+..|+.+....
T Consensus 286 Y~~~YQ~GVFISRSS~~~~-----r---ir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF 357 (402)
T PF02487_consen 286 YQLLYQLGVFISRSSLPFF-----R---IRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTF 357 (402)
T ss_pred HHHHHHHHHhhhhcceeee-----e---hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 6777778877777644332 1 2344555555555444333321 23445555667778999999999999
Q ss_pred HHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHH
Q 017754 250 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 250 ~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G 285 (366)
..++|-.++++|-.+.|...++-.+|-.+ +..++=
T Consensus 358 ~~I~~~~~~~~REFslg~vsvsds~GI~l-Agll~l 392 (402)
T PF02487_consen 358 YRISEEVPPEDREFSLGAVSVSDSLGILL-AGLLGL 392 (402)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhHHHHH-HHHHHH
Confidence 99999999999999999999999999885 655443
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.44 E-value=0.23 Score=50.08 Aligned_cols=47 Identities=11% Similarity=0.137 Sum_probs=40.3
Q ss_pred hhhh-hHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 243 AHWA-IVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 243 ~~~~-~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
...+ +.++.+.|++..++..+.|+++..++++|..+ ||.+..++.+.
T Consensus 144 ~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~-sg~~~~~~~~~ 191 (472)
T TIGR00769 144 VVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIF-SGRTIKYFSKL 191 (472)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh
Confidence 3444 78899999999999999999999999999996 88888887653
No 245
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.39 E-value=0.11 Score=54.71 Aligned_cols=69 Identities=17% Similarity=0.229 Sum_probs=54.3
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHH-hCCChhHH--HHHHHHH-HHhhhhhhhhhhhhhh
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQS-LGYADTSI--YVSMISI-WNFLGRVGGGYFSEAI 196 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~-~g~s~~~~--~vsl~~i-~~~~g~~~~G~lsD~~ 196 (366)
.++++++|+.|.+..++..+-.....++..++|.+++. +|.+.+.+ +...+.+ +..+|-+++|++.-|+
T Consensus 384 s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkf 456 (735)
T KOG3626|consen 384 SIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKF 456 (735)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeee
Confidence 47788999999988888888888888899999999965 78887665 5545544 4557888999988776
No 246
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.27 E-value=0.58 Score=46.99 Aligned_cols=142 Identities=14% Similarity=0.113 Sum_probs=75.2
Q ss_pred HHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHH---HhCCChhHHHHHHHHH----HHhhhhhhhhhhhhhhhhhccCc
Q 017754 131 QALMKADFLLLFFSLVLASGSGLTVIDNLGQICQ---SLGYADTSIYVSMISI----WNFLGRVGGGYFSEAIVRKFAYP 203 (366)
Q Consensus 131 ~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~---~~g~s~~~~~vsl~~i----~~~~g~~~~G~lsD~~grr~~~~ 203 (366)
++++++++.++...++.............|.-.. ..+.++.. +..+.++ +..++....+.+++|+.+. .
T Consensus 235 ~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~-~~ai~~~~~g~g~v~~g~~~~~l~~rir~f---g 310 (461)
T KOG3098|consen 235 KLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTY-LIAIYSIGIGLGEVIGGLDFSILSKRIRGF---G 310 (461)
T ss_pred HHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchh-HHHHHHHHHhHHHHHHHHHHHHHhhhhhhc---c
Confidence 4556666666655544443332223333332221 22222221 4444444 4444555566666665332 1
Q ss_pred hhHHHHHHHHHHHHHHHHHH--hh--h---------------hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhH
Q 017754 204 RPVAMAVAQVVMAFALLYYA--IG--W---------------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGAL 264 (366)
Q Consensus 204 R~~~~~~~~~~~~~~~~l~~--~~--~---------------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~ 264 (366)
|...+.++.++-.+++++.. .+ . .....+..++.|++-....+....+++..+ ++.+..+
T Consensus 311 ~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~ 389 (461)
T KOG3098|consen 311 RKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQA 389 (461)
T ss_pred cCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHH
Confidence 22233444444444443322 11 1 124456677889988888888888999999 7777777
Q ss_pred HHHHHhhhhhhHH
Q 017754 265 YNFLTLASPAGSL 277 (366)
Q Consensus 265 ~g~~~~~~~~G~~ 277 (366)
.++.-.-..+++.
T Consensus 390 fsi~kfyq~~~s~ 402 (461)
T KOG3098|consen 390 FSLFKFYQSVASC 402 (461)
T ss_pred HHHHHHHHHHHHH
Confidence 7777666666655
No 247
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.26 E-value=0.069 Score=52.88 Aligned_cols=109 Identities=7% Similarity=-0.012 Sum_probs=70.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhh---H-----HHHHHHHHHHHHHhhh
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWP---G-----EIYVTTVLVGLSYGAH 244 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~---~-----~l~~~~~l~G~~~g~~ 244 (366)
+..++.+..+...+.+-|+.|++|-|... .++..+.++|.++=. ...+ . ..+.+..+.+...-..
T Consensus 84 lsmIym~v~vp~gf~~mw~ldk~GLR~a~------llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fi 157 (480)
T KOG2563|consen 84 LSMIYMVVSVPFGFAAMWILDKFGLRTAL------LLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFI 157 (480)
T ss_pred HHHHHHHHHHHHhhHHHHhhcccchHHHH------HHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHh
Confidence 55566777777888889999999987655 677777777776622 2222 1 2233444444332222
Q ss_pred hhhHHH-HHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 245 WAIVPA-AASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 245 ~~~~~~-~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
-..|+ +.+-+|++++|+++..+..+++++|..+ |-++...+..+
T Consensus 158 -m~lPskiA~~WF~~~qra~A~~~~v~~n~LGvav-g~llppilV~~ 202 (480)
T KOG2563|consen 158 -LGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAV-GFLLPPILVPS 202 (480)
T ss_pred -hccccHHHHhhCCcchhhhhhhHHHhcchHHHHH-HhhccceecCC
Confidence 22233 5567799999999999999999998885 65555555443
No 248
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.00 E-value=0.078 Score=52.10 Aligned_cols=152 Identities=10% Similarity=-0.045 Sum_probs=90.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH--hh-hhH-HHHHHHHHHHHHHhhhhhhHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA--IG-WPG-EIYVTTVLVGLSYGAHWAIVP 249 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~--~~-~~~-~l~~~~~l~G~~~g~~~~~~~ 249 (366)
..++..+..++-.|..|.++|+.|+|+.. +.....+..+..+++. .+ ++. ...+..++...++........
T Consensus 63 ~~aia~llia~LapiLG~iaD~~g~Rk~~-----~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 63 ASAIAGLLIALLAPILGTIADYPGPRKKF-----FGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCcchH-----HHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 45566666777788889999999986654 2333334333333333 22 222 334445556677777778888
Q ss_pred HHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHH---h-hhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcch
Q 017754 250 AAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIY---D-YYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICY 325 (366)
Q Consensus 250 ~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~---d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~ 325 (366)
++.+++..+++.+...|+......+|+.+ +.+..... . .++..+. ..+ +.-.-...-
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i--~li~~~~~~~~~~~~~~~~~-----l~~------------l~~~~~~~~ 198 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVI--LLIFVVLGFALGQQTGITII-----LLG------------LPPADGEDV 198 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchH--HHHHHHHHHhcccccceeEE-----eec------------cCccccccc
Confidence 99999999988888888877778888875 44443221 1 1111110 000 000011135
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Q 017754 326 SITCGIMAGLCIIAMVMSLIVVHR 349 (366)
Q Consensus 326 ~~~f~i~~~~~~~~~~~~~~~~~~ 349 (366)
|.++.+.++..++-.+..+...++
T Consensus 199 ri~~~l~A~W~li~~iPm~~~v~~ 222 (438)
T COG2270 199 RITGLLAALWWLLFALPMILNVHD 222 (438)
T ss_pred hhHHHHHHHHHHHHHhHHHhcccc
Confidence 788888888888877777665443
No 249
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.97 E-value=0.51 Score=46.65 Aligned_cols=93 Identities=13% Similarity=0.118 Sum_probs=56.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
.-+...+.+.++.+..|++..++.+. ....+.+..++.+..+++.. ..+.+..|++.++++..+-...++...-+
T Consensus 290 VeA~~tllgA~~al~~g~v~~~w~~~----~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qI 365 (412)
T PF01770_consen 290 VEAASTLLGAIAALLAGYVKVNWDRW----GELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQI 365 (412)
T ss_pred HHHHHHHHHHHHHHHHhHhhcchHHH----HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566677777888874444431 12233333344444444444 34556778888888877777667766666
Q ss_pred HHhhCCCchhhHHHHHHh
Q 017754 253 SELFGLKSFGALYNFLTL 270 (366)
Q Consensus 253 se~f~~~~~g~~~g~~~~ 270 (366)
+.....+.+|..+|+-++
T Consensus 366 A~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 366 AKNLSEERYALVFGINTF 383 (412)
T ss_pred HHhccccceeeeeeeHHH
Confidence 776777788888876444
No 250
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.88 E-value=0.0014 Score=67.28 Aligned_cols=129 Identities=16% Similarity=0.146 Sum_probs=2.5
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhh------
Q 017754 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW------ 226 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~------ 226 (366)
+...+.++-+.++++++++ +.+.+-+++.+..++..++.+|. .||.|+..+.+++++|.++++.++
T Consensus 22 ~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~------hrprwig~g~~~~~~g~~l~~lPhf~~~~y 95 (539)
T PF03137_consen 22 VNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG------HRPRWIGIGALLMGLGSLLFALPHFLSGPY 95 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------CCcceeeecHHHHHHHHHHHhccHhhcCCC
Confidence 3345667778889988776 77777788888777777776553 355666888888888877753211
Q ss_pred ---------------------------------------------hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCch
Q 017754 227 ---------------------------------------------PGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSF 261 (366)
Q Consensus 227 ---------------------------------------------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~ 261 (366)
...++++-++.|+|....+++..+++=|..++++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~s 175 (539)
T PF03137_consen 96 SYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNS 175 (539)
T ss_dssp --------------------------------------------------------SSS---------------------
T ss_pred ccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccC
Confidence 01234456677888888899999999999999998
Q ss_pred hhHHHHHHhhhhhhHHhhhhHHHHHHHhh
Q 017754 262 GALYNFLTLASPAGSLIFSGVIASGIYDY 290 (366)
Q Consensus 262 g~~~g~~~~~~~~G~~i~gp~l~G~l~d~ 290 (366)
+...|++.....+|..+ |=.++|.+...
T Consensus 176 plYiGi~~~~~~lGPa~-Gf~lg~~~L~~ 203 (539)
T PF03137_consen 176 PLYIGILYAMSILGPAL-GFLLGSFCLRI 203 (539)
T ss_dssp -----------------------------
T ss_pred ccchhhhhHHhhccHHH-HHHHHHHHHhc
Confidence 88889988888888874 65566655443
No 251
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.86 E-value=0.11 Score=51.88 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=61.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHH-HHHHHHHHHHHHHHHHh----------hhhHHHHHHHHHHHHHHh
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVA-MAVAQVVMAFALLYYAI----------GWPGEIYVTTVLVGLSYG 242 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~-~~~~~~~~~~~~~l~~~----------~~~~~l~~~~~l~G~~~g 242 (366)
...+++++..+||.+..+.. .-.+| +|.++ ..++=+++...+++... .+....++..+++|+..|
T Consensus 312 ~~~~fNvgD~vGR~~~~~~~-~p~~~---~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 312 CFLLFNLFDWLGRSLTSKFM-WPDED---SRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHhhhhheeE-eeCCC---ccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 78888999999999665431 11111 11122 12222333333333221 233445667788899888
Q ss_pred hhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 243 AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 243 ~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
-..++.....++...++++-.+-+++..+..+|-.+ |.
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~-Gs 425 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLAL-GA 425 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 777777777777777777877777777777776664 44
No 252
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.85 E-value=0.66 Score=46.68 Aligned_cols=119 Identities=13% Similarity=0.094 Sum_probs=81.0
Q ss_pred hCCChhHH-HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh-HHHHHHHHHHHHHHHHHHhh-----------hhHHHHH
Q 017754 166 LGYADTSI-YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP-VAMAVAQVVMAFALLYYAIG-----------WPGEIYV 232 (366)
Q Consensus 166 ~g~s~~~~-~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~-~~~~~~~~~~~~~~~l~~~~-----------~~~~l~~ 232 (366)
+|++-... +-++-.++-.+..|+..++--+.++++.-+|. .-+.+++.+++.+++++... +...++.
T Consensus 320 ~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil 399 (498)
T COG3104 320 FGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVL 399 (498)
T ss_pred cceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHH
Confidence 34443333 78888888888888888887787666544443 34567777777777665421 1235566
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHH
Q 017754 233 TTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIAS 285 (366)
Q Consensus 233 ~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G 285 (366)
..++.++|--...++.-+.+..+-|+.-.+...+...+....|..+ +..+++
T Consensus 400 ~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l-~g~va~ 451 (498)
T COG3104 400 SYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTL-GGQVAG 451 (498)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh-hceecc
Confidence 6777788766666777778888888877777888877777777775 666655
No 253
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.39 E-value=0.18 Score=50.77 Aligned_cols=120 Identities=16% Similarity=0.229 Sum_probs=92.3
Q ss_pred HhCCChhHH--HHHHHHHHHhhhhhhhh-hhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHH
Q 017754 165 SLGYADTSI--YVSMISIWNFLGRVGGG-YFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWP-GEIYVTTVLVGLS 240 (366)
Q Consensus 165 ~~g~s~~~~--~vsl~~i~~~~g~~~~G-~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~-~~l~~~~~l~G~~ 240 (366)
.+|++..+. +.++.++.+.++.++.. .++-.++.|+.. ..++....+..+++++.+. +.++...++.+ .
T Consensus 271 ~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i------~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~-~ 343 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLI------SLGLLSEFLQLLLFAFATETWMMFAAGVVVA-L 343 (463)
T ss_pred ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHh------hHHHHHHHHHHHHHHHhccchhhhHHHHHHH-h
Confidence 368877665 78888888888887765 677777776533 7788888888888886544 44455554444 4
Q ss_pred HhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 241 YGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 241 ~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
.+...+..-+.++-+.+.+++|+.+++......+.+.+ +|.+.+.++..+.
T Consensus 344 ~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~-~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 344 AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVV-SPALYGNIFALTL 394 (463)
T ss_pred hcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhh-hHHHHHHHHHHHH
Confidence 45667888889999999999999999999999999996 8999999988775
No 254
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.14 E-value=0.23 Score=51.37 Aligned_cols=150 Identities=16% Similarity=0.246 Sum_probs=98.5
Q ss_pred hcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHHHHHHHHHHHHHHHHh----h----
Q 017754 157 DNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMAVAQVVMAFALLYYAI----G---- 225 (366)
Q Consensus 157 ~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~~~~~~~~~~~~l~~~----~---- 225 (366)
+.+.++...++.+...+ .+..++-..+...+++++++|.+ ||-+.+ .++.++..+|..++.. .
T Consensus 59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI------~~~s~i~~~G~~~lt~~a~~~~l~p 132 (571)
T KOG1237|consen 59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTI------NIGSLISLLGLFGLTLSAMIPALLP 132 (571)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHH------HHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 33444556677766544 77888877888889999999987 554333 4444444444333210 0
Q ss_pred -------h-----------hHHHHHHHHHHHHHHhhhhhhHHHHHHHhhC---CC---chhhHHHHHHhhhhhhHHhhhh
Q 017754 226 -------W-----------PGEIYVTTVLVGLSYGAHWAIVPAAASELFG---LK---SFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 226 -------~-----------~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~---~~---~~g~~~g~~~~~~~~G~~i~gp 281 (366)
. ...++.+..+..+|.|+.-+...+.-+|-|+ ++ ....-++.......+|..+ +.
T Consensus 133 ~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~-a~ 211 (571)
T KOG1237|consen 133 FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALL-AQ 211 (571)
T ss_pred ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHH-HH
Confidence 0 0145566666777888888888888899998 22 2447788888888899886 65
Q ss_pred HHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017754 282 VIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCIIAMVMSLI 345 (366)
Q Consensus 282 ~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~~~~~~~~ 345 (366)
.+.-++-|..+ |...|.+..++.+++.++.+.
T Consensus 212 t~~vyiq~~~~--------------------------------w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 212 TVLVYIQDNVG--------------------------------WKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HHHHhhhhccc--------------------------------ceeeccHHHHHHHHHHHHHHc
Confidence 55555544443 999999988877776655544
No 255
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.89 E-value=4.7 Score=40.32 Aligned_cols=65 Identities=17% Similarity=-0.014 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhhhhHHHHHhcHHHHHHHhCC-C--hhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017754 138 FLLLFFSLVLASGSGLTVIDNLGQICQSLGY-A--DTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 138 ~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~-s--~~~~~vsl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
.|.++.+.++.....-+.-+..|.++.+..- + ....+.-.-++..++..+..|...||..|.+..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~ 71 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVI 71 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhH
Confidence 4556666666666555566666666666521 1 112233333444555666677788998877665
No 256
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.80 E-value=1.2 Score=43.95 Aligned_cols=149 Identities=9% Similarity=0.066 Sum_probs=90.4
Q ss_pred hCCChhHHHHHHHHH---HHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHH
Q 017754 166 LGYADTSIYVSMISI---WNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSY 241 (366)
Q Consensus 166 ~g~s~~~~~vsl~~i---~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~ 241 (366)
.|++..+..--++.+ .....-+....++|.++-|+.. .+..+...+...++. ..+...+-+.-++.|++.
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpvi------il~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~ 108 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVI------ILQALSYIITWLLLLFGTSVLAMQLMQFFYGLAT 108 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHH------HHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHH
Confidence 678776652112211 1233445678899999876544 333333333333333 333445556666777766
Q ss_pred hhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccC
Q 017754 242 GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLG 321 (366)
Q Consensus 242 g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g 321 (366)
++ -...++++=...+++++.++.+....+.-+|..+ |..++-.+....+.
T Consensus 109 a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~-s~~lgQllvs~~~~---------------------------- 158 (412)
T PF01770_consen 109 AA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFI-SSLLGQLLVSFGGV---------------------------- 158 (412)
T ss_pred HH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCC----------------------------
Confidence 55 3445555555567888999998888888788775 66665555553331
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhhchH
Q 017754 322 SICYSITCGIMAGLCIIAMVMSLIVVHRTKS 352 (366)
Q Consensus 322 ~~~~~~~f~i~~~~~~~~~~~~~~~~~~~r~ 352 (366)
+|...+++..+...++++.++++....|.
T Consensus 159 --sy~~L~~isl~~~~~a~~~~~fLP~~~~S 187 (412)
T PF01770_consen 159 --SYFQLNYISLASVSLALLIALFLPMPKRS 187 (412)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 38888888887777778777777655443
No 257
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.75 E-value=0.12 Score=54.30 Aligned_cols=174 Identities=16% Similarity=0.171 Sum_probs=111.6
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhh------
Q 017754 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW------ 226 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~------ 226 (366)
+...+.++=+.++++++.. +.+.+-+++.+.-.+..|..-|..| +.++..+.++++++.++.+.++
T Consensus 116 ~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~Hr------Pr~Ig~G~~~m~lgsll~alPHf~~~~y 189 (735)
T KOG3626|consen 116 FNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHR------PRWIGIGLVLMGLGSLLFALPHFFSGPY 189 (735)
T ss_pred hhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCc------cceeeechhHHHHHHHHHhChHHhcCcc
Confidence 3344555666688877665 6677778888877777777666533 3344677777777766653220
Q ss_pred ----------------------------------------------hH-HHHHHHHHHHHHHhhhhhhHHHHHHHhhCCC
Q 017754 227 ----------------------------------------------PG-EIYVTTVLVGLSYGAHWAIVPAAASELFGLK 259 (366)
Q Consensus 227 ----------------------------------------------~~-~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~ 259 (366)
+. .++++-++.|+|....+++..+++=|....+
T Consensus 190 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~ 269 (735)
T KOG3626|consen 190 EYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKK 269 (735)
T ss_pred hhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccccccccc
Confidence 11 2334556778888888888889999999999
Q ss_pred chhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhh-hhhhhhhccCCCCCcccCCCCCCcccCCcchHHHHHHHHHHHHH
Q 017754 260 SFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEK-QAGLLWKYNGNMLPVSFRDQETPTCLGSICYSITCGIMAGLCII 338 (366)
Q Consensus 260 ~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~~~~f~i~~~~~~~ 338 (366)
+-....|++.....+|.++ |=++++++...+... +. .+ .. ...+..=.| .|...|++.+++.++
T Consensus 270 ~SplYlgi~~~~~~lGPai-GfllgS~~l~lYvD~~~~----------~~-~i-t~~DPrWIG--AWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 270 NSPLYLGILYSMAILGPAI-GFLLGSFCLKLYVDFGLS----------PI-GI-TPTDPRWIG--AWWLGFLICGALLLF 334 (735)
T ss_pred CCcHHHHHHHHHHHhhhHH-HHHHHHHHHHeeeccccC----------CC-CC-CCCCcchhh--HHHHHHHHHHHHHHH
Confidence 9888899998888888885 766677665554311 00 00 00 000111111 377888888888888
Q ss_pred HHHHHHHHhhh
Q 017754 339 AMVMSLIVVHR 349 (366)
Q Consensus 339 ~~~~~~~~~~~ 349 (366)
.++..+.+.+.
T Consensus 335 ~a~p~f~fPk~ 345 (735)
T KOG3626|consen 335 SAVPLFFFPKE 345 (735)
T ss_pred HHHHHHhCccc
Confidence 88777766554
No 258
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.59 E-value=3.4 Score=38.26 Aligned_cols=25 Identities=16% Similarity=0.421 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhc
Q 017754 15 QNVLTVLAVGLIIIILLPVTIPVVL 39 (366)
Q Consensus 15 ~~~~~~~~~~~~~ll~~pl~~~~~~ 39 (366)
+.-+..+..++.++.++|+++....
T Consensus 37 ~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 37 TNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3345667777778888888887765
No 259
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=94.54 E-value=1 Score=45.03 Aligned_cols=116 Identities=16% Similarity=0.158 Sum_probs=69.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHH---HHh--------hhhHHHHHHHHHHHHHHh
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLY---YAI--------GWPGEIYVTTVLVGLSYG 242 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l---~~~--------~~~~~l~~~~~l~G~~~g 242 (366)
+.+...+.+.++.+++-.+-.++.+++.+ |..+..... +.++..+. +.. .+....+.-.++..+..+
T Consensus 256 f~~~~~~vg~~~~l~g~~~y~~~~~~~~~-R~~~~~t~~-~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~ 333 (433)
T PF03092_consen 256 FYGTLSIVGSIASLLGILLYRKYFSNWSW-RRIFVVTTL-VSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGM 333 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHH-HHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHH
Confidence 44444455566666666666666666655 444333332 22222221 110 111111223445555555
Q ss_pred hhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 243 AHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 243 ~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
..+-.....++++-|+..-|+.|+++....++|..+ +..++..+.+..+
T Consensus 334 i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~-s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 334 IAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSV-SSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcC
Confidence 555555568899999999999999999999999995 8888888777665
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=94.18 E-value=0.52 Score=47.56 Aligned_cols=73 Identities=10% Similarity=0.257 Sum_probs=56.6
Q ss_pred hhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCCCCCcccCCCCCCcccCCcch
Q 017754 246 AIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGNMLPVSFRDQETPTCLGSICY 325 (366)
Q Consensus 246 ~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~g~~~~ 325 (366)
....+.-+++.++++.++..+++.....++..+ +|++...++...+ +
T Consensus 407 ~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~-~~~~~t~~~~~~g--------------------------------~ 453 (488)
T KOG2325|consen 407 TALDTLYSKILGPRDQGTMQGVFSISGSIARVV-GPIFSTAIFTLSG--------------------------------P 453 (488)
T ss_pred chHHHHHHHHhCCccccceeEEEEeccchhhhh-hHHHHhhhHHhcC--------------------------------c
Confidence 345567799999999999999999999999996 9999999988887 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhch
Q 017754 326 SITCGIMAGLCIIAMVMSLIVVHRTK 351 (366)
Q Consensus 326 ~~~f~i~~~~~~~~~~~~~~~~~~~r 351 (366)
++.+.+.++..++...+..++.+|.+
T Consensus 454 ~~v~~~~~~~~l~~~~l~~~~~~r~~ 479 (488)
T KOG2325|consen 454 RPVWIILLCLLLVVAALWIVFLKRLV 479 (488)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 77776666655555555555554433
No 261
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.44 E-value=0.3 Score=48.60 Aligned_cols=125 Identities=14% Similarity=0.095 Sum_probs=75.5
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHh-hh-----
Q 017754 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAI-GW----- 226 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~-~~----- 226 (366)
=...++++.+++|.+..-. ..-.--+.+.+-+|+.|..|||..-|+.-+||.+.+.+ ....++++++.. ++
T Consensus 51 elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s-~~i~~~l~Lig~aaDig~~l 129 (498)
T KOG0637|consen 51 ELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGS-LLIAVSLFLIGYAADIGLLL 129 (498)
T ss_pred HhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhh-HHHHHHHhhhhhHhhhhHHh
Confidence 3456778999999876533 23333455677788999999997666665555544433 333444444321 11
Q ss_pred ---hH----HHHHHHHHHHHH-----HhhhhhhHHHHHHHhhCCCchhh-HHHHHHhhhhhhHHhhhh
Q 017754 227 ---PG----EIYVTTVLVGLS-----YGAHWAIVPAAASELFGLKSFGA-LYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 227 ---~~----~l~~~~~l~G~~-----~g~~~~~~~~~~se~f~~~~~g~-~~g~~~~~~~~G~~i~gp 281 (366)
+. ..-+..++.|+. .-......=+..+|+...++..+ +++.......+|+.+ |-
T Consensus 130 gd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvL-GY 196 (498)
T KOG0637|consen 130 GDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVL-GY 196 (498)
T ss_pred cCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhccee-ee
Confidence 10 122333334432 22333444568899998887777 888888888888885 53
No 262
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.73 E-value=0.35 Score=48.52 Aligned_cols=101 Identities=11% Similarity=0.072 Sum_probs=78.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAAS 253 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~s 253 (366)
..++......+..++++.+.|+++.|+.+ .++......-.+.+...+.+.+|+...+.|+|.+..|.-...+.+
T Consensus 55 ~~aiiY~~ftv~~l~~psiv~~i~~K~~l------v~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 55 GQAIIYAFFTVSCLFAPSIVNFLGPKWAL------VIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhhHHHHH------HHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehh
Confidence 46777778888899999999999988665 555555554444445667888999999999999988988888999
Q ss_pred HhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 254 ELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 254 e~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
+....+...+..++.......+.++ |+
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~-Gg 155 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLII-GG 155 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHh-hh
Confidence 9998888888877766666665553 53
No 263
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=92.54 E-value=1 Score=44.03 Aligned_cols=126 Identities=16% Similarity=0.217 Sum_probs=72.2
Q ss_pred hhHHHHHhcHHHHHHHhCCChhHHHHHHHHHHHhhhhhhhhhhhh-----hhhhhccCchhHHHHHHHHHHHHHHHHHHh
Q 017754 150 GSGLTVIDNLGQICQSLGYADTSIYVSMISIWNFLGRVGGGYFSE-----AIVRKFAYPRPVAMAVAQVVMAFALLYYAI 224 (366)
Q Consensus 150 ~~~~~~~~~l~~i~~~~g~s~~~~~vsl~~i~~~~g~~~~G~lsD-----~~grr~~~~R~~~~~~~~~~~~~~~~l~~~ 224 (366)
+.-++....+|.+++.-|.|-+.....-+.-+.+.-.++|.++.| |+|||+.+- .-++.+.+..++++..
T Consensus 44 GiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWv-----vp~q~llG~~mllLs~ 118 (510)
T KOG3574|consen 44 GIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWV-----VPCQYLLGLFMLLLSY 118 (510)
T ss_pred CCchhHhhhhHHHhcCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhcccccee-----eehHHHHHHHHHHHhh
Confidence 333445558999998777664443333334467778899999999 888876652 3344444443334331
Q ss_pred ------h----hhHH--HHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhh
Q 017754 225 ------G----WPGE--IYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSG 281 (366)
Q Consensus 225 ------~----~~~~--l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp 281 (366)
. .+.. +.+..++.-|..+.+-..+-++.-.+..+++.|-+......+..+|.++ |.
T Consensus 119 ~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL-~~ 186 (510)
T KOG3574|consen 119 LVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFL-GN 186 (510)
T ss_pred CCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHh-hc
Confidence 1 1111 2223334444444544455556666777777776666666666777764 53
No 264
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.61 E-value=3.2 Score=41.48 Aligned_cols=155 Identities=19% Similarity=0.166 Sum_probs=86.6
Q ss_pred CHHHHhhhhhHHHHHHHHHHhhhhHHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchh
Q 017754 128 TLPQALMKADFLLLFFSLVLASGSGLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRP 205 (366)
Q Consensus 128 ~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~ 205 (366)
.|+..++.+.|. -.+++.+.+...+.+...+-.++++.|++...+ +=++-.+.+..|.+...++-+|+|-.+.-
T Consensus 251 ~w~~Y~~q~vfl-as~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G--- 326 (432)
T PF06963_consen 251 GWRTYFRQPVFL-ASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG--- 326 (432)
T ss_pred cHHHHHhCHHHH-HHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhH---
Confidence 466666666444 334444444444555566667888889998765 66666777888888888888888764332
Q ss_pred HHHHHHHH-HHHHHHHHHH-hhhh-HHHHHHHHHHHHH--Hhhhhhh---HHHHHHHhhCCCchhhHHHHHHhhhhhhHH
Q 017754 206 VAMAVAQV-VMAFALLYYA-IGWP-GEIYVTTVLVGLS--YGAHWAI---VPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 206 ~~~~~~~~-~~~~~~~l~~-~~~~-~~l~~~~~l~G~~--~g~~~~~---~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
.+....+. +..++...+. ..++ .......++.|+. =-+.|.. ..-++-|..+.++||...|.-+...++-.+
T Consensus 327 ~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~l 406 (432)
T PF06963_consen 327 LWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFEL 406 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHH
Confidence 12222222 2222222222 2222 1222222222322 1122322 223566788888999999998888887777
Q ss_pred hhhhHHHHHHH
Q 017754 278 IFSGVIASGIY 288 (366)
Q Consensus 278 i~gp~l~G~l~ 288 (366)
+ . .+.+.+.
T Consensus 407 l-~-~~~~ii~ 415 (432)
T PF06963_consen 407 L-S-FVLTIIF 415 (432)
T ss_pred H-H-HHHHhcc
Confidence 4 2 3444443
No 265
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=91.35 E-value=1.5 Score=33.38 Aligned_cols=66 Identities=8% Similarity=-0.004 Sum_probs=43.7
Q ss_pred HHHHHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH
Q 017754 152 GLTVIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA 223 (366)
Q Consensus 152 ~~~~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~ 223 (366)
-+.+...+|.+.++.+++.++. +-+.-.++..+|.+...++.++..+++. +..+.++..+..+..+
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~------~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRL------LRAGLLLTVLSTAAMA 75 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH------HHHHHHHHHHHHHHHH
Confidence 3567778999999999988765 6667777777788887777766433222 2455555555444444
No 266
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.30 E-value=0.53 Score=43.89 Aligned_cols=90 Identities=14% Similarity=0.151 Sum_probs=50.4
Q ss_pred HHHhCCChhHH---HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 017754 163 CQSLGYADTSI---YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGL 239 (366)
Q Consensus 163 ~~~~g~s~~~~---~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~ 239 (366)
.+.+|+...++ ++.-++- ..+...+.|-+.|+.|||+.- +...+..++.++. =-.+....+++++++-|+
T Consensus 64 YstYgFgkG~IgqLfiaGfgS-smLFGtivgSLaDkqGRKrac---vtycitYiLsCiT---KhSpqYkVLmVGR~LGGi 136 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGS-SMLFGTIVGSLADKQGRKRAC---VTYCITYILSCIT---KHSPQYKVLMVGRVLGGI 136 (454)
T ss_pred ehhcCccCCccceeeecccch-HHHHHHHHHHHHhhhccccce---eeehHHHHHHHHh---hcCCceEEEeehhhhhhH
Confidence 35567765554 2222221 234455668899999999764 1112333332221 112233467889999998
Q ss_pred HHhhhhhhHHH-HHHHhhCCC
Q 017754 240 SYGAHWAIVPA-AASELFGLK 259 (366)
Q Consensus 240 ~~g~~~~~~~~-~~se~f~~~ 259 (366)
...-.++..-+ +++|.-..+
T Consensus 137 aTsLLFSaFEsWliaEHnekr 157 (454)
T KOG4332|consen 137 ATSLLFSAFESWLIAEHNEKR 157 (454)
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 87777766655 556655333
No 267
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=89.95 E-value=0.11 Score=49.38 Aligned_cols=100 Identities=11% Similarity=0.098 Sum_probs=3.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHH-HHHHHHHHHHHHHH-----------hhhhHHHHHHHHHHHHHH
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMA-VAQVVMAFALLYYA-----------IGWPGEIYVTTVLVGLSY 241 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~-~~~~~~~~~~~l~~-----------~~~~~~l~~~~~l~G~~~ 241 (366)
...+++++.++||.+.++.- +-+++ +|..+.. +.=+++...+++.. ..+....++..+++|+..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~-~~~~~---~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TN 262 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPR-WPGPS---PRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTN 262 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeE-ecccc---cccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHcc
Confidence 56678999999999888752 11111 1111111 11112211111111 122234455677888888
Q ss_pred hhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHH
Q 017754 242 GAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 242 g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
|-..++.....++..+++++..+-.++.....+|-.
T Consensus 263 Gyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~ 298 (309)
T PF01733_consen 263 GYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLF 298 (309)
T ss_dssp ----HHHH----------------------------
T ss_pred chhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 877777777778888877777776666666666655
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=89.74 E-value=25 Score=35.78 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=59.4
Q ss_pred HHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhhhhhhhhhhhccCC-CCCcc-cCCCCC
Q 017754 239 LSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYAEKQAGLLWKYNGN-MLPVS-FRDQET 316 (366)
Q Consensus 239 ~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~~~~~~~~~~~~~~-~~~~~-~~~~~~ 316 (366)
+....++....+.-+.+..+..=|+.+-++|..+++|+- .-..+.=++.|....+.=. .+ ....+ ....+.
T Consensus 417 f~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt-WP~~~vL~lVD~fT~~~C~------~~~t~~~~c~~~~~k 489 (544)
T PF13000_consen 417 FMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT-WPRTFVLWLVDYFTVATCT------VPGTNSFSCSSDAEK 489 (544)
T ss_pred HHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC-chHHHHHHHhhhccccccC------CCCCCCceeccHHHH
Confidence 334455555566667777888899999999999999998 4445666778875422100 00 00000 011123
Q ss_pred Ccc---cCCcch--HHHHHHHHHHHHHHHHHHH
Q 017754 317 PTC---LGSICY--SITCGIMAGLCIIAMVMSL 344 (366)
Q Consensus 317 ~~c---~g~~~~--~~~f~i~~~~~~~~~~~~~ 344 (366)
..| .|..|- +=.+++..++|++..++.+
T Consensus 490 ~~Ct~~~GG~C~i~rDGYYi~~~lCvviGi~~~ 522 (544)
T PF13000_consen 490 EQCTKAGGGTCVIIRDGYYITNILCVVIGIVLW 522 (544)
T ss_pred HHHhhCCCCeEEEEeccchhhhHHHHHHHHHHH
Confidence 346 366674 6677887777777555443
No 269
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=89.37 E-value=27 Score=35.57 Aligned_cols=42 Identities=19% Similarity=0.273 Sum_probs=36.0
Q ss_pred hHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHh
Q 017754 247 IVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYD 289 (366)
Q Consensus 247 ~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d 289 (366)
+.|..+.|++..++..+.|+++.++.++|..+ |+.+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~-sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIF-SGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 46888899999999999999999999999996 7777776665
No 270
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=88.14 E-value=0.53 Score=47.87 Aligned_cols=48 Identities=13% Similarity=0.252 Sum_probs=40.1
Q ss_pred HHhcHHHHHHHhCCChhHH--HHHHHHHHHhhhhhhhhhhhhhhhhhccC
Q 017754 155 VIDNLGQICQSLGYADTSI--YVSMISIWNFLGRVGGGYFSEAIVRKFAY 202 (366)
Q Consensus 155 ~~~~l~~i~~~~g~s~~~~--~vsl~~i~~~~g~~~~G~lsD~~grr~~~ 202 (366)
....++.+.+.+|++.... ++..--+..+++.|++|+++||+.+|+..
T Consensus 30 l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~l 79 (618)
T KOG3762|consen 30 LFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPL 79 (618)
T ss_pred cchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCch
Confidence 4456778889999998876 77777888999999999999999776554
No 271
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=88.10 E-value=5.6 Score=38.58 Aligned_cols=88 Identities=19% Similarity=0.213 Sum_probs=57.8
Q ss_pred HHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhC
Q 017754 179 SIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFG 257 (366)
Q Consensus 179 ~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~ 257 (366)
.+.++++.+..|++.-.+.| .+...+.++.++.+...+++. ..+.+..|++.+++...+....++....++....
T Consensus 281 tlLGa~~~~~~g~l~i~w~r----~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~ 356 (433)
T KOG3810|consen 281 TLLGAIAALAAGYLNINWNR----WGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLS 356 (433)
T ss_pred HHHHHHHHHHHHheeeccch----hhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhh
Confidence 34456666777777655544 233455555555554444444 3455677888888888887777777777888888
Q ss_pred CCchhhHHHHHHh
Q 017754 258 LKSFGALYNFLTL 270 (366)
Q Consensus 258 ~~~~g~~~g~~~~ 270 (366)
.+.+|..+|+-..
T Consensus 357 ~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 357 SELFGLVFGINTF 369 (433)
T ss_pred hhhheeeeehHHH
Confidence 8888888887444
No 272
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=85.14 E-value=12 Score=37.98 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=59.1
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhhhHHHHHH
Q 017754 175 VSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYA-IGWPGEIYVTTVLVGLSYGAHWAIVPAAAS 253 (366)
Q Consensus 175 vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~-~~~~~~l~~~~~l~G~~~g~~~~~~~~~~s 253 (366)
-++..+.+++..+..|++-.++.+ ... +.+.+..++.+..+++.. ..+.+..|++.++++..+....++...-++
T Consensus 304 eA~~tllga~~a~~ag~~~~~w~~-~~~---l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA 379 (511)
T TIGR00806 304 DAASTLLGAITSFIAGFVNIRWAR-WSK---LLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIA 379 (511)
T ss_pred HHHHHHHHHHHHHHHHhhcCCchh-hHH---HHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556677788887444421 111 233333333333333333 346677889999999998888888888888
Q ss_pred HhhCCCchhhHHHHHHhh
Q 017754 254 ELFGLKSFGALYNFLTLA 271 (366)
Q Consensus 254 e~f~~~~~g~~~g~~~~~ 271 (366)
.....+.+|..+|+-++.
T Consensus 380 ~~L~~~~~aLvFGiNtfv 397 (511)
T TIGR00806 380 SSLSKELCALVFGINTFV 397 (511)
T ss_pred HHhcccceEEEEecHHHH
Confidence 888888889888875543
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=84.83 E-value=43 Score=33.14 Aligned_cols=49 Identities=8% Similarity=0.034 Sum_probs=26.3
Q ss_pred hHHHHHhcHHHHHHHh-CCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhh
Q 017754 151 SGLTVIDNLGQICQSL-GYADTSIYVSMISIWNFLGRVGGGYFSEAIVRK 199 (366)
Q Consensus 151 ~~~~~~~~l~~i~~~~-g~s~~~~~vsl~~i~~~~g~~~~G~lsD~~grr 199 (366)
..-.+++.-+++.+.+ +.+.+..+.+.+.+.+.+..++.-.+--+...|
T Consensus 33 pWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 33 PWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred chHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666666665 444433355555555555555555554444433
No 274
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=81.36 E-value=4.1 Score=34.50 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=26.7
Q ss_pred hhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHH
Q 017754 244 HWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 244 ~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
...+.|.+.|.-+.++.-|..+|+-.+-.+++-+
T Consensus 111 llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 111 LLGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 3567788888889888899999988777766655
No 275
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=80.70 E-value=58 Score=31.65 Aligned_cols=64 Identities=13% Similarity=0.209 Sum_probs=34.2
Q ss_pred hhhHHHHHHHHHHhhhhHHHHH----hcHHHHHHHhCCChhHH--HHHHHH-HHHhhhhhhhhhhhhhhhh
Q 017754 135 KADFLLLFFSLVLASGSGLTVI----DNLGQICQSLGYADTSI--YVSMIS-IWNFLGRVGGGYFSEAIVR 198 (366)
Q Consensus 135 ~~~~~ll~~~~~~~~~~~~~~~----~~l~~i~~~~g~s~~~~--~vsl~~-i~~~~g~~~~G~lsD~~gr 198 (366)
.+++++++++-+++..+..... .|+..=-...|++.... ..+... ++|.+-.++.|.+++...+
T Consensus 118 ~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~ 188 (354)
T PF05631_consen 118 SSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLAD 188 (354)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHH
Confidence 4668888888776655544332 24432223457765432 233333 4555556666666665543
No 276
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=74.45 E-value=90 Score=30.56 Aligned_cols=116 Identities=20% Similarity=0.232 Sum_probs=55.2
Q ss_pred HHHHHHHHHhhhhHHHHHhcHHHHHHHh-CCCh--hHHHHHHHHHHHhhhhhhhhhhhhhh-hhhccCchhHHHHHHHHH
Q 017754 139 LLLFFSLVLASGSGLTVIDNLGQICQSL-GYAD--TSIYVSMISIWNFLGRVGGGYFSEAI-VRKFAYPRPVAMAVAQVV 214 (366)
Q Consensus 139 ~ll~~~~~~~~~~~~~~~~~l~~i~~~~-g~s~--~~~~vsl~~i~~~~g~~~~G~lsD~~-grr~~~~R~~~~~~~~~~ 214 (366)
|++.++.+....++..+-..+..+...+ |-+. .+.+++.+-....+|..+.-++.|.- -.|..-.-...-.++-+-
T Consensus 10 alL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~S 89 (508)
T COG4262 10 ALLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVS 89 (508)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccch
Confidence 4444454555555565555566666654 3222 22255555555555555554444432 111110000001111111
Q ss_pred HHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhhhhHHHHHHH
Q 017754 215 MAFALLYYAIG---WPGEIYVTTVLVGLSYGAHWAIVPAAASE 254 (366)
Q Consensus 215 ~~~~~~l~~~~---~~~~l~~~~~l~G~~~g~~~~~~~~~~se 254 (366)
.++.++.++.. ....++....++|.-.|.-.++...+.-.
T Consensus 90 a~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 90 AAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 12223334422 33467888888888888888877766544
No 277
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=69.87 E-value=1e+02 Score=29.26 Aligned_cols=88 Identities=20% Similarity=0.090 Sum_probs=46.6
Q ss_pred hhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhh
Q 017754 184 LGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGA 263 (366)
Q Consensus 184 ~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~ 263 (366)
+-.-++|.+|||-|.-+.-- -..|.++....... .+...+++ ..++.+...|..++...+..+.....++.-+
T Consensus 22 llaaLG~l~sERsGVlNIgl-EG~M~~gAf~~~~~--~~~t~spw----~gl~~a~l~g~l~~ll~a~~ti~l~~nqiis 94 (304)
T COG1079 22 LLAALGGLFSERSGVLNIGL-EGIMLLGAFSGALF--AYGTGSPW----LGLLAAALVGALFGLLHAFLTIKLRANQIIS 94 (304)
T ss_pred HHHHHHHHHHHHhceeeech-hhHHHHHHHHHHHH--HHccccHH----HHHHHHHHHHHHHHHHHHHHHHhhccccchh
Confidence 34446688899988754330 11112222111111 01122233 3344455556667778888888888888666
Q ss_pred HHHHHHhhhhhhHHh
Q 017754 264 LYNFLTLASPAGSLI 278 (366)
Q Consensus 264 ~~g~~~~~~~~G~~i 278 (366)
..++-..+..+..++
T Consensus 95 G~alnl~a~Glt~fl 109 (304)
T COG1079 95 GLALNLLASGLTAFL 109 (304)
T ss_pred HHHHHHHHHHHHHHH
Confidence 665555555555553
No 278
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=66.22 E-value=1.2e+02 Score=30.33 Aligned_cols=42 Identities=7% Similarity=0.021 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHH
Q 017754 231 YVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSL 277 (366)
Q Consensus 231 ~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~ 277 (366)
++..++.|++.+.......++++ .||++. .+.+..+.++++.
T Consensus 110 ~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv 151 (437)
T TIGR00939 110 MASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGV 151 (437)
T ss_pred HHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHH
Confidence 34445556666555555555444 576543 3333344444444
No 279
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.55 E-value=16 Score=28.88 Aligned_cols=18 Identities=22% Similarity=0.335 Sum_probs=12.5
Q ss_pred HHHhhhhhhhhhhhhhhh
Q 017754 180 IWNFLGRVGGGYFSEAIV 197 (366)
Q Consensus 180 i~~~~g~~~~G~lsD~~g 197 (366)
|.+.+...+.||+.|++-
T Consensus 53 IsGilVGa~iG~llD~~a 70 (116)
T COG5336 53 ISGILVGAGIGWLLDKFA 70 (116)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 344555567799999984
No 280
>PRK10263 DNA translocase FtsK; Provisional
Probab=63.89 E-value=1e+02 Score=35.19 Aligned_cols=18 Identities=11% Similarity=0.379 Sum_probs=10.1
Q ss_pred hhHHhhhhHHHHHHHhhhh
Q 017754 274 AGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 274 ~G~~i~gp~l~G~l~d~~~ 292 (366)
.|+++ |-.+...+....|
T Consensus 142 gGGII-G~lLs~lL~~LfG 159 (1355)
T PRK10263 142 SGGVI-GSLLSTTLQPLLH 159 (1355)
T ss_pred ccchH-HHHHHHHHHHHHh
Confidence 35554 6666666665554
No 281
>COG3619 Predicted membrane protein [Function unknown]
Probab=62.61 E-value=1.2e+02 Score=27.48 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=18.6
Q ss_pred HhcHHHHHHHhCCCh-hHH-HHHHHHHHHhhhhhhhhhhhhhh
Q 017754 156 IDNLGQICQSLGYAD-TSI-YVSMISIWNFLGRVGGGYFSEAI 196 (366)
Q Consensus 156 ~~~l~~i~~~~g~s~-~~~-~vsl~~i~~~~g~~~~G~lsD~~ 196 (366)
+.|.-+..-++.-.+ ... ...+..+.-++|......++.+.
T Consensus 40 TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~ 82 (226)
T COG3619 40 TGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRA 82 (226)
T ss_pred eccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345555555543222 223 44444455555644444444443
No 282
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=62.11 E-value=16 Score=36.10 Aligned_cols=106 Identities=15% Similarity=0.152 Sum_probs=59.9
Q ss_pred HHHH-HHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHH-HHHHHHHHHHH-------hhhhHHHHHHHHHHHHHHhhh
Q 017754 174 YVSM-ISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQ-VVMAFALLYYA-------IGWPGEIYVTTVLVGLSYGAH 244 (366)
Q Consensus 174 ~vsl-~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~-~~~~~~~~l~~-------~~~~~~l~~~~~l~G~~~g~~ 244 (366)
.+.+ ++++..+|++.+.++-+.- ||+. ...... .+....+.++- ..+.+...+...++|+..|-.
T Consensus 287 ~~~l~fN~~d~vG~~~a~~~~~~~-~r~l-----~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYl 360 (406)
T KOG1479|consen 287 LVFLSFNVFDLIGSILAALLTWPD-PRKL-----TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYL 360 (406)
T ss_pred HHHHHhHHHHHhhhhhhhcccCCC-Ccee-----hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchH
Confidence 5666 8899999988887764443 2222 222222 22222222111 334556677788889988877
Q ss_pred hhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHH
Q 017754 245 WAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGI 287 (366)
Q Consensus 245 ~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l 287 (366)
.++...+.++..++++.-.+-+++...-..|-. .+.+.+++
T Consensus 361 tsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~--~G~~~s~l 401 (406)
T KOG1479|consen 361 TSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLA--LGSLLSWV 401 (406)
T ss_pred hhheehhcCCCCChHHHHHHHHHHHHHHHHHHH--HhhHHHHH
Confidence 777777777777766655555555444433333 23444444
No 283
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=60.12 E-value=1.2e+02 Score=26.66 Aligned_cols=20 Identities=10% Similarity=0.192 Sum_probs=10.5
Q ss_pred hhhHHhhhhHHHHHHHhhhh
Q 017754 273 PAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 273 ~~G~~i~gp~l~G~l~d~~~ 292 (366)
.+.+++.|..+++.+++..+
T Consensus 171 ~i~~f~~Ga~~ga~l~~~~~ 190 (209)
T PF06912_consen 171 IILSFFIGAILGALLYRRLG 190 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 33444445555666666654
No 284
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=59.30 E-value=75 Score=31.50 Aligned_cols=50 Identities=18% Similarity=0.132 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhhhHHHHHHHhhCCC
Q 017754 209 AVAQVVMAFALLYYAI-GWPGEIYVTTVLVGLSYGAHWAIVPAAASELFGLK 259 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~~-~~~~~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~ 259 (366)
.++.+++.+++++.+. .+...-+++.++.+++.|..-...-++ +..|+..
T Consensus 93 ~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~~ 143 (402)
T PF02487_consen 93 LICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGKS 143 (402)
T ss_pred HHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCcc
Confidence 4445566666666654 344455667777777766655444444 4467643
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=58.87 E-value=1.4e+02 Score=28.39 Aligned_cols=94 Identities=16% Similarity=0.209 Sum_probs=55.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhh---h-----hHHHHHHHHHHHHHHhhhh
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIG---W-----PGEIYVTTVLVGLSYGAHW 245 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~---~-----~~~l~~~~~l~G~~~g~~~ 245 (366)
+.+.+.+.+.+|.-+.. |+..|....-.-.+-+.+++.++.+.+.... . +..-+++..++-.|.|..|
T Consensus 287 iFatFMlASmLGSSla~----Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 287 IFATFMLASMLGSSLAS----RLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred HHHHHHHHHHHhhHHHH----HHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 44444555555554443 4433222211223344455555444443211 1 2234566667778889999
Q ss_pred hhHHHHHHHhhCCCchhhHHHHHHhh
Q 017754 246 AIVPAAASELFGLKSFGALYNFLTLA 271 (366)
Q Consensus 246 ~~~~~~~se~f~~~~~g~~~g~~~~~ 271 (366)
+.+.-+=++..|.+.+++.+|+.-.-
T Consensus 363 PSimkmRsqyIPEearstimNfFRvP 388 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVP 388 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheech
Confidence 98888889999999999999987654
No 286
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=56.39 E-value=31 Score=35.16 Aligned_cols=127 Identities=12% Similarity=0.039 Sum_probs=63.5
Q ss_pred hcHHHHHHH--hCCChhHHHHHHHHHHHhhhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhh--------
Q 017754 157 DNLGQICQS--LGYADTSIYVSMISIWNFLGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW-------- 226 (366)
Q Consensus 157 ~~l~~i~~~--~g~s~~~~~vsl~~i~~~~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~-------- 226 (366)
...|.++++ .+.+-++..+.-...+.+--.++|.++.|-+-.|+.-+|+-|+.-.+.+.++.++.+....
T Consensus 21 gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~~ 100 (544)
T PF13000_consen 21 GSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFDG 100 (544)
T ss_pred ccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhcccc
Confidence 567888877 4444333211111223444567777777754333333455556667777766665554211
Q ss_pred ------------hH-----HHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHH
Q 017754 227 ------------PG-----EIYVTTVLVGLSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIA 284 (366)
Q Consensus 227 ------------~~-----~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~ 284 (366)
.. .+.+..++.-+..+.+-..+=.++-.+..+++.+-+......+.++|-++ |-.++
T Consensus 101 ~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfl-s~tvF 174 (544)
T PF13000_consen 101 VDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFL-SFTVF 174 (544)
T ss_pred cchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHH-HHHHH
Confidence 00 01122212222223333333345555667777777766666666777664 54333
No 287
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=56.08 E-value=95 Score=31.88 Aligned_cols=55 Identities=18% Similarity=0.262 Sum_probs=26.3
Q ss_pred HHHHHhhhhHHHHHhcHHHHHHHhCCC-h--hHHHHHHHHHHHhhhhhhhhhhhhhhh
Q 017754 143 FSLVLASGSGLTVIDNLGQICQSLGYA-D--TSIYVSMISIWNFLGRVGGGYFSEAIV 197 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~l~~i~~~~g~s-~--~~~~vsl~~i~~~~g~~~~G~lsD~~g 197 (366)
++.+++.|.........-.+...+|.- . ...+++..-+...++..++|+.|-|+-
T Consensus 264 ls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~y 321 (521)
T PF02990_consen 264 LSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLY 321 (521)
T ss_pred HHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 344445555444433333334444531 1 223444444555556666677666653
No 288
>COG4603 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=52.87 E-value=1.2e+02 Score=29.51 Aligned_cols=32 Identities=25% Similarity=0.522 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHhhCCCc
Q 017754 229 EIYVTTVLVGLSYGAHWAIVPAAASELFGLKS 260 (366)
Q Consensus 229 ~l~~~~~l~G~~~g~~~~~~~~~~se~f~~~~ 260 (366)
......++.|...|+.|+..|++..-.|+.++
T Consensus 113 l~~p~a~l~g~~~G~~wa~ipg~Lka~f~~nE 144 (356)
T COG4603 113 LALPLALLAGAAGGGLWALIPGLLKARFGVNE 144 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccH
Confidence 34456677788889999999999999999887
No 289
>PF12832 MFS_1_like: MFS_1 like family
Probab=50.62 E-value=98 Score=22.70 Aligned_cols=30 Identities=10% Similarity=0.105 Sum_probs=24.2
Q ss_pred hhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 262 GALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 262 g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
..-.|++....++-..+ ++++.|.+.|+.+
T Consensus 34 ~~~iGil~~i~~~~~~~-~~pl~g~laDk~~ 63 (77)
T PF12832_consen 34 PSQIGILSAIRPLIRFL-APPLWGFLADKFG 63 (77)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHC
Confidence 34557777777888885 8999999999997
No 290
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=50.18 E-value=1.3e+02 Score=27.58 Aligned_cols=28 Identities=29% Similarity=0.479 Sum_probs=18.5
Q ss_pred hHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 263 ALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 263 ~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
.-.+.+..+..+|..+ | ++.|.++|+.+
T Consensus 37 ~~l~~l~~~~~~G~~~-G-~~~G~l~d~~g 64 (250)
T PF06813_consen 37 SQLNTLSTAGDIGSYF-G-ILAGLLYDRFG 64 (250)
T ss_pred HHHHHHHHHHHHHhhc-c-HHHHHHHHhcc
Confidence 3446666677777773 4 66777777765
No 291
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=49.49 E-value=1.7e+02 Score=28.19 Aligned_cols=22 Identities=5% Similarity=0.235 Sum_probs=13.7
Q ss_pred HHHHhhhhhHHHHHHHHHHhhh
Q 017754 129 LPQALMKADFLLLFFSLVLASG 150 (366)
Q Consensus 129 ~~~~l~~~~~~ll~~~~~~~~~ 150 (366)
+++.+++|..+..+++..++..
T Consensus 238 ~~~~~~nP~~~a~~lgli~~~~ 259 (385)
T PF03547_consen 238 ILKLFKNPPLIAIILGLIIGLI 259 (385)
T ss_pred HHHHHhCcHHHHHHHHHHHHHH
Confidence 3556677777776666555443
No 292
>PF14851 FAM176: FAM176 family
Probab=42.04 E-value=56 Score=27.71 Aligned_cols=29 Identities=7% Similarity=-0.007 Sum_probs=24.4
Q ss_pred cchHHHHHHHHHHHHHHHhhhhhhhhccc
Q 017754 13 ANQNVLTVLAVGLIIIILLPVTIPVVLVF 41 (366)
Q Consensus 13 ~~~~~~~~~~~~~~~ll~~pl~~~~~~~~ 41 (366)
-.+.+.|++..|.++|++.-++++++...
T Consensus 19 PE~~aLYFv~gVC~GLlLtLcllV~risc 47 (153)
T PF14851_consen 19 PERFALYFVSGVCAGLLLTLCLLVIRISC 47 (153)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 46788899999999999998888887755
No 293
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.39 E-value=90 Score=24.83 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=20.7
Q ss_pred hhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 261 FGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 261 ~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
.+.+.++-...-.+++.+ -+...||+.|++.
T Consensus 40 k~~~~a~klssefIsGil-VGa~iG~llD~~a 70 (116)
T COG5336 40 KGYAQAFKLSSEFISGIL-VGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhHHHHHHHHHHHH-HHHHHHHHHHHhc
Confidence 445555555555666665 4677899999986
No 294
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=34.66 E-value=1.8e+02 Score=29.45 Aligned_cols=31 Identities=10% Similarity=0.049 Sum_probs=20.2
Q ss_pred hhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 261 FGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 261 ~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
+|...|+.+....+...+ .....|.+.|..+
T Consensus 442 ~G~~~gvln~~I~ipQvi-vs~~~Gp~~~~~G 472 (498)
T KOG0637|consen 442 QGLDLGVLNCAIVIPQVL-VSLGLGPLDQLFG 472 (498)
T ss_pred CCceeeeeeeeeeehhhe-eeccccchhhhcC
Confidence 466667777777777775 4444566666665
No 295
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=33.40 E-value=1.3e+02 Score=30.88 Aligned_cols=10 Identities=20% Similarity=0.733 Sum_probs=3.8
Q ss_pred hhHHHHHHHh
Q 017754 280 SGVIASGIYD 289 (366)
Q Consensus 280 gp~l~G~l~d 289 (366)
++.+++.+|.
T Consensus 313 aGy~S~~~yk 322 (521)
T PF02990_consen 313 AGYVSARLYK 322 (521)
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 296
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=32.99 E-value=2.2e+02 Score=21.67 Aligned_cols=24 Identities=21% Similarity=0.265 Sum_probs=14.4
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhh
Q 017754 174 YVSMISIWNFLGRVGGGYFSEAIV 197 (366)
Q Consensus 174 ~vsl~~i~~~~g~~~~G~lsD~~g 197 (366)
......++..++..+.|.+.|..+
T Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~ 115 (141)
T TIGR00880 92 MSAGIALGPLLGPPLGGVLAQFLG 115 (141)
T ss_pred HHHhHHHHHHHhHHhHHHHhcccc
Confidence 344445666666666777766554
No 297
>COG1288 Predicted membrane protein [Function unknown]
Probab=32.84 E-value=5.3e+02 Score=26.01 Aligned_cols=27 Identities=22% Similarity=0.453 Sum_probs=14.0
Q ss_pred HHHhhCCCc------hhhHHHHHHhhhhhhHHh
Q 017754 252 ASELFGLKS------FGALYNFLTLASPAGSLI 278 (366)
Q Consensus 252 ~se~f~~~~------~g~~~g~~~~~~~~G~~i 278 (366)
.+|..+..+ +..+-|+.|+..+-.+.+
T Consensus 410 LaD~vgv~RqvvV~Afq~g~G~~n~I~PTSg~~ 442 (481)
T COG1288 410 LADLVGVPRQVVVLAFQLGDGFSNIIAPTSGLL 442 (481)
T ss_pred hHHhcCCCHHHhhhhhhhcchhhheecCchHHH
Confidence 367776553 334445555555554443
No 298
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.05 E-value=1.8e+02 Score=22.00 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHhhc
Q 017754 325 YSITCGIMAGLCIIAMVMSLIVVHRTKSVYAQLYGN 360 (366)
Q Consensus 325 ~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 360 (366)
|.-.|+.++.+.+.+..+.+.-..|-++.++++-.|
T Consensus 43 w~KGy~~MG~lfltgSt~tL~K~~rD~he~~rl~ar 78 (95)
T COG4298 43 WTKGYWAMGILFLTGSTVTLVKYRRDEHESARLSAR 78 (95)
T ss_pred HHHHHHHHHHHHHhcchhhhhHHhhhHHHHHHHHHH
Confidence 888899999888888877777776766667666444
No 299
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=29.78 E-value=5.8e+02 Score=25.51 Aligned_cols=14 Identities=21% Similarity=0.332 Sum_probs=10.8
Q ss_pred hhhHHHHHHHhhhh
Q 017754 279 FSGVIASGIYDYYA 292 (366)
Q Consensus 279 ~gp~l~G~l~d~~~ 292 (366)
++|.+.|.+....+
T Consensus 190 Lapv~tg~Iitfvs 203 (503)
T KOG2601|consen 190 LAPVITGLIITFVS 203 (503)
T ss_pred hhhhhhcccceeec
Confidence 48888888877665
No 300
>PTZ00370 STEVOR; Provisional
Probab=29.71 E-value=4.7e+02 Score=24.64 Aligned_cols=31 Identities=16% Similarity=0.417 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhchHHHH
Q 017754 325 YSITCGIMAGLCIIAMVMSLIVVHRTKSVYA 355 (366)
Q Consensus 325 ~~~~f~i~~~~~~~~~~~~~~~~~~~r~~~~ 355 (366)
|..+-+++.++.++-.++.+|+++|+++.++
T Consensus 257 ygiaalvllil~vvliilYiwlyrrRK~swk 287 (296)
T PTZ00370 257 YGIAALVLLILAVVLIILYIWLYRRRKNSWK 287 (296)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 6666667776777777777888877776665
No 301
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=29.70 E-value=6.1e+02 Score=25.73 Aligned_cols=55 Identities=9% Similarity=0.076 Sum_probs=36.4
Q ss_pred HHHHHhhhhhhHHHHHHHhhCCC-chhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 237 VGLSYGAHWAIVPAAASELFGLK-SFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 237 ~G~~~g~~~~~~~~~~se~f~~~-~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
.|++.-......-..+.+.+|.+ .+...+|-+....++.+.+ -..+.+.+..+.|
T Consensus 276 y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~-~~l~~~~l~~~~G 331 (472)
T TIGR00769 276 YGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVT-MMLLSGNVIRKYG 331 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh
Confidence 33333333344445778888755 4788888888877777765 3555688888887
No 302
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=28.70 E-value=5.9e+02 Score=25.56 Aligned_cols=53 Identities=15% Similarity=0.049 Sum_probs=41.7
Q ss_pred HHHhhhhhhHHHHHHHhhCCCchhhHHHHHHhhhhhhHHhhhhHHHHHHHhhhh
Q 017754 239 LSYGAHWAIVPAAASELFGLKSFGALYNFLTLASPAGSLIFSGVIASGIYDYYA 292 (366)
Q Consensus 239 ~~~g~~~~~~~~~~se~f~~~~~g~~~g~~~~~~~~G~~i~gp~l~G~l~d~~~ 292 (366)
.....++....+..+++-++..-|+-+.+.|...++|+.- =..+++++.|...
T Consensus 381 ~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~w-p~tv~l~l~D~lt 433 (510)
T KOG3574|consen 381 VFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNW-PGTVALWLADGLT 433 (510)
T ss_pred hHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCc-HHHHHHHhcccCc
Confidence 3334445555667788888889999999999999999995 5678899988765
No 303
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=25.53 E-value=8.5e+02 Score=26.14 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHH
Q 017754 209 AVAQVVMAFALLYYA--IGWPGEIYVTTVLVGLS 240 (366)
Q Consensus 209 ~~~~~~~~~~~~l~~--~~~~~~l~~~~~l~G~~ 240 (366)
.++.++++++.+... .+.++.+..+.++.+|+
T Consensus 61 ~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~ 94 (704)
T TIGR01666 61 IFTLICFSIASFSVELLFGKPWLFAVGLTVSTFG 94 (704)
T ss_pred HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 444444444444422 44455544444444444
No 304
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=24.49 E-value=99 Score=25.17 Aligned_cols=10 Identities=40% Similarity=0.594 Sum_probs=4.3
Q ss_pred HHHHHHHHHH
Q 017754 328 TCGIMAGLCI 337 (366)
Q Consensus 328 ~f~i~~~~~~ 337 (366)
.|.+++++.+
T Consensus 70 i~gv~aGvIg 79 (122)
T PF01102_consen 70 IFGVMAGVIG 79 (122)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 3444444433
No 305
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=24.35 E-value=1.7e+02 Score=28.46 Aligned_cols=59 Identities=12% Similarity=0.145 Sum_probs=33.0
Q ss_pred hhhhhhhhhhhhhhhhccCchhHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHhhhhhhHHHHH
Q 017754 184 LGRVGGGYFSEAIVRKFAYPRPVAMAVAQVVMAFALLYYAIGW----PGEIYVTTVLVGLSYGAHWAIVPAAA 252 (366)
Q Consensus 184 ~g~~~~G~lsD~~grr~~~~R~~~~~~~~~~~~~~~~l~~~~~----~~~l~~~~~l~G~~~g~~~~~~~~~~ 252 (366)
...++.+.+..++|-|+.+ . ++...+.++...+ ...++-..+..|++.+..|+..-+++
T Consensus 73 ~s~m~~~~~Ir~~g~K~tm------~----lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYl 135 (390)
T KOG3097|consen 73 DSSMFMPLLIRFLGTKWTM------V----LAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYL 135 (390)
T ss_pred HHHHHHHHHHHHHhhHHHH------H----HHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCccee
Confidence 3444445666777776544 2 2233333333222 22456677888998888776655544
No 306
>PHA03237 envelope glycoprotein M; Provisional
Probab=24.18 E-value=7.3e+02 Score=24.82 Aligned_cols=26 Identities=12% Similarity=0.059 Sum_probs=15.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhhCCC
Q 017754 234 TVLVGLSYGAHWAIVPAAASELFGLK 259 (366)
Q Consensus 234 ~~l~G~~~g~~~~~~~~~~se~f~~~ 259 (366)
.++.++..-...++.+-++.|.+=.+
T Consensus 258 ~v~~ai~~F~vl~iiyliv~E~vL~r 283 (424)
T PHA03237 258 TITVAIGVFVALTLMYLLIVEFVVSR 283 (424)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455677777777776444
No 307
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=23.06 E-value=3.1e+02 Score=20.14 Aligned_cols=18 Identities=17% Similarity=0.323 Sum_probs=10.7
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 017754 325 YSITCGIMAGLCIIAMVM 342 (366)
Q Consensus 325 ~~~~f~i~~~~~~~~~~~ 342 (366)
++.++++.++.+++++++
T Consensus 34 ~~~~~~~~~~g~~~~~lv 51 (76)
T PF06645_consen 34 FSYTFYIYGAGVVLTLLV 51 (76)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 666777666555554443
No 308
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=22.47 E-value=3e+02 Score=25.00 Aligned_cols=12 Identities=8% Similarity=0.194 Sum_probs=5.8
Q ss_pred hhhhhhhhhhhh
Q 017754 188 GGGYFSEAIVRK 199 (366)
Q Consensus 188 ~~G~lsD~~grr 199 (366)
+.|++.-++.++
T Consensus 195 ~lG~~~a~~s~~ 206 (234)
T cd02433 195 ATGAVTGLLSGR 206 (234)
T ss_pred HHHHHHHhhCCC
Confidence 345555555443
No 309
>PF02937 COX6C: Cytochrome c oxidase subunit VIc; InterPro: IPR004204 Cytochrome c oxidase, a 13 subunit complex, 1.9.3.1 from EC is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit VIc.; GO: 0004129 cytochrome-c oxidase activity; PDB: 3AG4_I 2DYS_V 3ASO_I 2EIK_V 2EIM_I 1OCC_V 1V54_V 1OCO_V 3ASN_V 2EIL_I ....
Probab=21.39 E-value=2.7e+02 Score=20.42 Aligned_cols=16 Identities=38% Similarity=0.528 Sum_probs=10.6
Q ss_pred HHhhhchHHHHHHhhc
Q 017754 345 IVVHRTKSVYAQLYGN 360 (366)
Q Consensus 345 ~~~~~~r~~~~~~~~~ 360 (366)
.+..++++.|++.|++
T Consensus 38 ~v~~pRKk~YadFYkn 53 (73)
T PF02937_consen 38 GVAEPRKKAYADFYKN 53 (73)
T ss_dssp HTHHHHHHHHHHHHHT
T ss_pred HHhhHHHHHHHHHHHc
Confidence 3445566778887766
No 310
>PHA02819 hypothetical protein; Provisional
Probab=20.53 E-value=2.8e+02 Score=20.21 Aligned_cols=27 Identities=7% Similarity=-0.001 Sum_probs=13.8
Q ss_pred CCcccCCcchHHHHHHHHHHHHHHHHH
Q 017754 316 TPTCLGSICYSITCGIMAGLCIIAMVM 342 (366)
Q Consensus 316 ~~~c~g~~~~~~~f~i~~~~~~~~~~~ 342 (366)
+.+|....++.|..+++..+.++.+++
T Consensus 35 s~~~~~~~~~~~~~~ii~l~~~~~~~~ 61 (71)
T PHA02819 35 NYNKKTKKSFLRYYLIIGLVTIVFVII 61 (71)
T ss_pred CCcccccCChhHHHHHHHHHHHHHHHH
Confidence 345533445666666666544443333
Done!