Query 017755
Match_columns 366
No_of_seqs 132 out of 1544
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 04:25:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017755.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017755hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.4 5.5E-11 1.9E-15 106.8 22.1 195 112-333 68-283 (315)
2 2woz_A Kelch repeat and BTB do 99.4 1.2E-10 4.2E-15 104.6 23.8 194 113-333 80-293 (318)
3 2xn4_A Kelch-like protein 2; s 99.4 1.9E-10 6.5E-15 102.5 23.7 197 111-334 77-283 (302)
4 3ii7_A Kelch-like protein 7; p 99.4 1.4E-10 4.7E-15 103.6 22.6 198 110-334 69-279 (306)
5 2vpj_A Kelch-like protein 12; 99.3 3.2E-10 1.1E-14 100.9 23.6 196 111-334 78-285 (301)
6 1zgk_A Kelch-like ECH-associat 99.3 2.5E-10 8.5E-15 102.2 21.9 196 111-334 90-294 (308)
7 3ii7_A Kelch-like protein 7; p 99.3 4.2E-10 1.4E-14 100.5 21.2 198 110-334 23-232 (306)
8 2xn4_A Kelch-like protein 2; s 99.2 1.3E-09 4.3E-14 97.1 20.3 196 111-334 30-236 (302)
9 1zgk_A Kelch-like ECH-associat 99.2 9.2E-10 3.1E-14 98.4 19.1 199 110-334 38-247 (308)
10 4asc_A Kelch repeat and BTB do 99.2 3.2E-09 1.1E-13 95.2 22.7 200 111-334 13-228 (315)
11 2vpj_A Kelch-like protein 12; 99.2 2.8E-09 9.5E-14 94.8 20.9 196 111-334 31-238 (301)
12 2uvk_A YJHT; unknown function, 99.1 4.2E-09 1.4E-13 96.1 19.6 214 101-334 19-301 (357)
13 2woz_A Kelch repeat and BTB do 99.1 2.5E-08 8.7E-13 89.4 20.9 150 171-334 79-238 (318)
14 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 3.4E-11 1.1E-15 77.4 0.4 42 1-42 9-50 (53)
15 2e31_A FBS1, F-box only protei 99.0 5.8E-11 2E-15 103.6 1.2 48 1-48 51-99 (297)
16 2uvk_A YJHT; unknown function, 98.9 7.3E-08 2.5E-12 87.8 19.4 154 170-333 168-348 (357)
17 2ovr_B FBW7, F-BOX/WD repeat p 98.9 6.7E-07 2.3E-11 83.7 25.8 233 1-275 19-268 (445)
18 3v7d_B Cell division control p 98.9 8.2E-07 2.8E-11 83.5 24.8 44 2-45 16-60 (464)
19 2zwa_A Leucine carboxyl methyl 98.9 1.1E-07 3.6E-12 94.6 18.9 199 111-336 412-644 (695)
20 1p22_A F-BOX/WD-repeat protein 98.7 1E-07 3.6E-12 89.1 13.3 281 2-331 12-329 (435)
21 1k3i_A Galactose oxidase precu 98.5 1.4E-06 4.8E-11 86.1 14.3 108 112-235 220-329 (656)
22 2zwa_A Leucine carboxyl methyl 98.4 3.7E-06 1.3E-10 83.5 14.3 157 168-335 410-591 (695)
23 1k3i_A Galactose oxidase precu 98.1 1.1E-05 3.8E-10 79.6 11.4 197 113-333 168-384 (656)
24 3l2o_B F-box only protein 4; s 97.8 2.1E-06 7.3E-11 74.1 -1.1 49 2-50 6-54 (312)
25 2ast_B S-phase kinase-associat 97.2 3.9E-05 1.3E-09 68.8 -0.6 39 1-39 9-47 (336)
26 3ei3_B DNA damage-binding prot 96.8 0.25 8.4E-06 44.3 22.2 195 103-330 88-285 (383)
27 2p1m_B Transport inhibitor res 96.6 0.00022 7.5E-09 69.2 -1.3 34 1-34 6-40 (594)
28 3jrp_A Fusion protein of prote 96.5 0.16 5.5E-06 45.0 17.0 142 170-329 79-242 (379)
29 3mbr_X Glutamine cyclotransfer 96.1 0.28 9.5E-06 41.4 15.3 115 199-335 25-142 (243)
30 3nol_A Glutamine cyclotransfer 96.0 0.15 5.1E-06 43.5 13.4 113 201-335 50-164 (262)
31 1gxr_A ESG1, transducin-like e 95.9 0.73 2.5E-05 39.8 20.7 197 99-333 60-261 (337)
32 3ogk_B Coronatine-insensitive 95.9 0.00095 3.3E-08 64.7 -1.2 33 2-34 14-47 (592)
33 1l0q_A Surface layer protein; 95.8 0.99 3.4E-05 40.3 21.3 190 101-333 85-281 (391)
34 1l0q_A Surface layer protein; 95.7 1.1 3.6E-05 40.0 21.1 188 99-331 40-237 (391)
35 1k8k_C P40, ARP2/3 complex 41 95.4 1.3 4.3E-05 39.0 18.1 196 104-331 23-237 (372)
36 4e54_B DNA damage-binding prot 95.3 0.49 1.7E-05 43.4 15.1 197 103-332 134-332 (435)
37 4aez_A CDC20, WD repeat-contai 95.1 1.8 6E-05 39.0 21.2 193 97-332 99-298 (401)
38 3jrp_A Fusion protein of prote 95.1 1.5 5.3E-05 38.5 17.6 204 102-334 70-295 (379)
39 3jro_A Fusion protein of prote 95.0 0.58 2E-05 46.5 15.6 192 107-329 27-240 (753)
40 2iwa_A Glutamine cyclotransfer 94.9 0.68 2.3E-05 39.6 13.7 111 204-335 32-144 (266)
41 4gqb_B Methylosome protein 50; 94.8 2 7E-05 38.0 18.1 201 99-338 91-298 (344)
42 4gga_A P55CDC, cell division c 94.8 2.3 8E-05 38.5 23.5 207 90-333 104-316 (420)
43 3bws_A Protein LP49; two-domai 94.7 2.3 7.9E-05 38.4 23.0 195 99-333 178-396 (433)
44 3dwl_C Actin-related protein 2 94.6 0.76 2.6E-05 40.8 14.1 189 109-330 31-239 (377)
45 3nok_A Glutaminyl cyclase; bet 94.5 0.47 1.6E-05 40.5 11.5 110 201-335 62-173 (268)
46 3g4e_A Regucalcin; six bladed 94.4 2.2 7.5E-05 36.6 21.1 207 97-336 20-239 (297)
47 3fm0_A Protein CIAO1; WDR39,SG 93.9 3.1 0.00011 36.5 17.9 185 107-325 34-223 (345)
48 3dsm_A Uncharacterized protein 93.9 3.1 0.0001 36.4 21.0 199 101-335 2-221 (328)
49 4aow_A Guanine nucleotide-bind 93.8 2.9 0.0001 36.0 19.2 107 203-329 226-339 (340)
50 3dsm_A Uncharacterized protein 93.6 3.4 0.00012 36.1 19.4 193 101-331 53-257 (328)
51 2ojh_A Uncharacterized protein 93.6 2.8 9.6E-05 35.0 23.6 202 99-334 50-265 (297)
52 1ri6_A Putative isomerase YBHE 93.2 3.8 0.00013 35.3 19.6 108 220-334 151-271 (343)
53 3u4y_A Uncharacterized protein 93.1 3.8 0.00013 35.3 19.2 190 101-330 9-210 (331)
54 3mkq_A Coatomer beta'-subunit; 92.8 8.1 0.00028 38.1 19.8 190 101-333 67-265 (814)
55 2pm9_A Protein WEB1, protein t 92.8 2.2 7.4E-05 38.2 13.9 199 102-330 127-340 (416)
56 4g56_B MGC81050 protein; prote 92.7 4.5 0.00015 35.8 15.7 198 99-333 103-307 (357)
57 3hfq_A Uncharacterized protein 92.6 4.8 0.00016 35.0 24.2 170 144-335 143-327 (347)
58 1k8k_C P40, ARP2/3 complex 41 92.4 4.9 0.00017 35.1 15.5 140 169-326 29-172 (372)
59 2aq5_A Coronin-1A; WD40 repeat 92.4 5.8 0.0002 35.4 22.2 203 101-334 93-308 (402)
60 2z2n_A Virginiamycin B lyase; 92.4 4.5 0.00015 34.1 20.0 192 96-331 104-299 (299)
61 3q7m_A Lipoprotein YFGL, BAMB; 92.3 4.9 0.00017 35.6 15.4 113 198-333 48-168 (376)
62 1gxr_A ESG1, transducin-like e 92.2 5 0.00017 34.3 21.1 177 104-325 156-335 (337)
63 3scy_A Hypothetical bacterial 92.2 3.6 0.00012 36.1 14.3 117 203-333 221-345 (361)
64 3q7m_A Lipoprotein YFGL, BAMB; 92.0 6.2 0.00021 34.9 20.1 194 96-333 98-302 (376)
65 1nir_A Nitrite reductase; hemo 92.0 8.5 0.00029 36.4 17.6 119 203-331 334-462 (543)
66 1yfq_A Cell cycle arrest prote 91.9 5.7 0.00019 34.2 22.4 198 103-331 71-286 (342)
67 3vgz_A Uncharacterized protein 91.8 5.9 0.0002 34.3 27.3 208 96-333 95-309 (353)
68 2dg1_A DRP35, lactonase; beta 91.7 6 0.0002 34.2 20.4 209 99-335 53-271 (333)
69 1pby_B Quinohemoprotein amine 91.4 6.2 0.00021 33.8 16.2 98 221-335 220-319 (337)
70 3hfq_A Uncharacterized protein 91.3 3.3 0.00011 36.1 13.0 104 220-333 18-124 (347)
71 3u4y_A Uncharacterized protein 91.0 7 0.00024 33.5 16.3 201 96-334 45-259 (331)
72 3zwl_B Eukaryotic translation 90.7 7.7 0.00026 33.6 22.6 70 253-333 186-255 (369)
73 1p22_A F-BOX/WD-repeat protein 90.4 10 0.00034 34.3 17.0 116 199-333 301-420 (435)
74 3ow8_A WD repeat-containing pr 90.2 8.5 0.00029 33.3 21.3 183 107-332 98-284 (321)
75 3i2n_A WD repeat-containing pr 90.2 8.4 0.00029 33.2 18.0 186 110-329 43-245 (357)
76 4g56_B MGC81050 protein; prote 90.0 9.6 0.00033 33.5 18.8 190 99-328 148-344 (357)
77 2hqs_A Protein TOLB; TOLB, PAL 89.9 11 0.00038 34.1 21.3 186 111-333 159-350 (415)
78 3dwl_C Actin-related protein 2 88.7 0.8 2.8E-05 40.6 6.6 142 170-329 33-179 (377)
79 2ynn_A Coatomer subunit beta'; 88.3 11 0.00038 32.1 20.1 68 254-333 198-265 (304)
80 3bws_A Protein LP49; two-domai 88.3 14 0.00047 33.1 21.4 187 102-327 224-432 (433)
81 2xyi_A Probable histone-bindin 88.3 8.8 0.0003 34.8 13.6 200 102-331 195-414 (430)
82 4a11_B DNA excision repair pro 88.2 13 0.00044 32.7 18.9 110 203-331 256-369 (408)
83 2z3z_A Dipeptidyl aminopeptida 88.2 20 0.00067 34.8 25.2 193 111-330 235-438 (706)
84 3m0c_C LDL receptor, low-densi 88.1 23 0.00078 35.4 27.7 178 144-352 473-656 (791)
85 1qks_A Cytochrome CD1 nitrite 88.0 19 0.00065 34.3 21.3 196 101-333 166-379 (567)
86 2mad_H Methylamine dehydrogena 87.8 12 0.00041 33.4 13.9 72 253-333 278-356 (373)
87 4a11_B DNA excision repair pro 87.5 14 0.00048 32.4 20.7 203 104-330 59-279 (408)
88 4aow_A Guanine nucleotide-bind 87.4 13 0.00044 31.8 17.9 100 221-332 151-251 (340)
89 3fm0_A Protein CIAO1; WDR39,SG 87.3 14 0.00049 32.1 15.2 107 221-338 84-193 (345)
90 3mkq_A Coatomer beta'-subunit; 87.3 24 0.00081 34.7 20.0 183 104-330 28-220 (814)
91 1q7f_A NHL, brain tumor CG1071 87.1 12 0.00042 31.3 25.3 206 96-335 35-246 (286)
92 1got_B GT-beta; complex (GTP-b 86.9 15 0.0005 31.9 21.6 95 220-330 164-260 (340)
93 4h5i_A Guanine nucleotide-exch 86.8 16 0.00054 32.2 17.7 111 221-338 198-311 (365)
94 2ovr_B FBW7, F-BOX/WD repeat p 86.8 17 0.0006 32.7 23.3 113 199-333 284-397 (445)
95 2vdu_B TRNA (guanine-N(7)-)-me 86.8 18 0.00062 32.8 22.5 67 254-332 210-276 (450)
96 3v65_B Low-density lipoprotein 86.7 17 0.00059 32.5 23.6 194 98-333 124-325 (386)
97 3i2n_A WD repeat-containing pr 86.6 15 0.0005 31.6 21.1 197 103-329 131-355 (357)
98 3odt_A Protein DOA1; ubiquitin 86.4 14 0.00047 31.1 21.1 191 100-332 28-219 (313)
99 4ery_A WD repeat-containing pr 86.3 15 0.0005 31.3 23.3 186 104-332 38-228 (312)
100 4aez_A CDC20, WD repeat-contai 86.2 18 0.00061 32.2 20.9 101 220-333 284-386 (401)
101 1sq9_A Antiviral protein SKI8; 85.8 18 0.0006 31.8 18.1 116 203-329 244-397 (397)
102 3sfz_A APAF-1, apoptotic pepti 85.8 11 0.00039 39.3 14.4 185 103-330 975-1161(1249)
103 1erj_A Transcriptional repress 85.8 19 0.00063 32.1 21.1 199 99-331 132-345 (393)
104 3bg1_A Protein SEC13 homolog; 85.4 17 0.00057 31.2 16.2 54 267-327 190-247 (316)
105 1r5m_A SIR4-interacting protei 85.4 19 0.00064 31.7 18.0 190 100-326 216-424 (425)
106 3sjl_D Methylamine dehydrogena 85.2 15 0.00052 33.1 13.0 115 203-338 237-375 (386)
107 1nir_A Nitrite reductase; hemo 85.1 26 0.00088 33.1 20.9 195 100-333 147-361 (543)
108 3e5z_A Putative gluconolactona 85.1 16 0.00056 30.7 23.6 205 96-335 34-254 (296)
109 3jro_A Fusion protein of prote 84.9 26 0.0009 34.5 15.8 97 221-329 32-134 (753)
110 3nol_A Glutamine cyclotransfer 84.8 17 0.00058 30.8 15.7 145 168-336 63-211 (262)
111 3v9f_A Two-component system se 83.8 36 0.0012 33.6 20.3 116 199-333 367-484 (781)
112 2dg1_A DRP35, lactonase; beta 83.6 20 0.00069 30.7 13.7 115 203-333 55-177 (333)
113 4gqb_B Methylosome protein 50; 83.1 23 0.00079 31.0 18.7 190 99-330 136-334 (344)
114 1q7f_A NHL, brain tumor CG1071 82.6 20 0.00069 29.9 23.7 190 99-327 86-280 (286)
115 4a2l_A BT_4663, two-component 82.4 41 0.0014 33.3 24.2 147 171-333 236-392 (795)
116 3mmy_A MRNA export factor; mRN 82.3 23 0.00079 30.4 20.4 199 101-331 97-308 (368)
117 3vl1_A 26S proteasome regulato 82.1 26 0.00091 30.9 26.2 195 100-334 107-331 (420)
118 3k26_A Polycomb protein EED; W 81.8 24 0.00083 30.3 21.3 68 254-327 299-366 (366)
119 2pm7_B Protein transport prote 81.8 23 0.00078 29.9 18.6 67 255-329 171-240 (297)
120 4e54_B DNA damage-binding prot 81.5 30 0.001 31.1 15.5 33 299-332 403-435 (435)
121 3hrp_A Uncharacterized protein 81.0 19 0.00063 32.6 12.0 112 202-333 140-255 (409)
122 3odt_A Protein DOA1; ubiquitin 80.9 23 0.0008 29.5 20.9 96 220-333 205-302 (313)
123 3nok_A Glutaminyl cyclase; bet 80.7 25 0.00087 29.8 13.1 139 172-336 77-220 (268)
124 2pbi_B Guanine nucleotide-bind 80.5 29 0.00098 30.3 21.4 182 103-324 168-354 (354)
125 2bkl_A Prolyl endopeptidase; m 80.4 44 0.0015 32.4 23.4 193 112-334 203-404 (695)
126 3mbr_X Glutamine cyclotransfer 79.9 25 0.00087 29.3 18.0 145 168-336 41-189 (243)
127 1npe_A Nidogen, entactin; glyc 79.9 25 0.00085 29.2 24.5 193 96-331 42-242 (267)
128 3fvz_A Peptidyl-glycine alpha- 79.8 29 0.00098 29.9 15.7 163 98-275 151-322 (329)
129 1rwi_B Serine/threonine-protei 79.8 24 0.00082 29.0 21.0 188 99-329 75-266 (270)
130 2hqs_A Protein TOLB; TOLB, PAL 79.7 34 0.0012 30.7 22.4 183 111-333 203-393 (415)
131 3bg1_A Protein SEC13 homolog; 79.4 29 0.00098 29.6 18.3 62 267-334 239-301 (316)
132 3iuj_A Prolyl endopeptidase; h 79.4 48 0.0016 32.2 20.0 116 202-334 290-412 (693)
133 3iz6_a 40S ribosomal protein R 79.4 32 0.0011 30.2 19.8 194 104-329 173-377 (380)
134 1evh_A WH1 domain, protein (ME 79.1 4 0.00014 29.6 5.4 42 111-162 11-52 (112)
135 1ri6_A Putative isomerase YBHE 79.0 29 0.00098 29.5 25.3 106 220-334 200-317 (343)
136 3vgz_A Uncharacterized protein 79.0 30 0.001 29.6 24.8 189 110-332 68-267 (353)
137 1jmx_B Amine dehydrogenase; ox 78.8 19 0.00066 30.8 11.1 111 202-329 9-136 (349)
138 2aq5_A Coronin-1A; WD40 repeat 78.7 34 0.0012 30.2 18.2 198 103-336 146-351 (402)
139 2pm7_B Protein transport prote 78.7 29 0.00099 29.3 18.1 72 255-333 220-292 (297)
140 1pjx_A Dfpase, DIISOPROPYLFLUO 78.6 29 0.00099 29.2 22.9 200 109-334 44-264 (314)
141 1n7d_A LDL receptor, low-densi 78.5 15 0.00051 36.1 11.1 114 199-333 500-620 (699)
142 3v9f_A Two-component system se 78.3 55 0.0019 32.3 23.7 208 97-333 319-530 (781)
143 3p5b_L Low density lipoprotein 78.3 38 0.0013 30.4 28.2 157 144-330 161-323 (400)
144 1pgu_A Actin interacting prote 78.3 44 0.0015 31.2 18.3 71 254-333 172-244 (615)
145 2ghs_A AGR_C_1268P; regucalcin 77.6 34 0.0012 29.5 14.1 108 203-333 60-174 (326)
146 3fvz_A Peptidyl-glycine alpha- 77.0 35 0.0012 29.3 18.6 204 99-326 99-321 (329)
147 3sfz_A APAF-1, apoptotic pepti 76.6 76 0.0026 33.0 20.1 194 99-334 624-835 (1249)
148 1vyh_C Platelet-activating fac 76.5 42 0.0014 30.0 22.1 65 254-330 308-372 (410)
149 2p4o_A Hypothetical protein; p 76.3 35 0.0012 29.0 13.7 106 203-329 42-149 (306)
150 3no2_A Uncharacterized protein 76.2 34 0.0012 28.8 15.5 187 103-331 7-199 (276)
151 4a0p_A LRP6, LRP-6, low-densit 76.0 58 0.002 31.4 26.6 228 54-332 6-242 (628)
152 3iz6_a 40S ribosomal protein R 75.2 43 0.0015 29.4 18.3 102 220-333 180-286 (380)
153 3vl1_A 26S proteasome regulato 75.2 43 0.0015 29.5 20.9 100 220-327 313-419 (420)
154 3scy_A Hypothetical bacterial 75.1 41 0.0014 29.1 18.2 105 221-329 78-188 (361)
155 4a2l_A BT_4663, two-component 74.7 69 0.0024 31.6 26.1 206 98-333 364-577 (795)
156 1ijq_A LDL receptor, low-densi 74.4 41 0.0014 28.9 26.4 195 97-333 37-245 (316)
157 3f3f_A Nucleoporin SEH1; struc 74.4 38 0.0013 28.5 16.6 101 221-329 34-145 (351)
158 1pgu_A Actin interacting prote 74.2 57 0.0019 30.4 20.0 135 169-328 466-615 (615)
159 3c75_H MADH, methylamine dehyd 74.2 37 0.0013 30.9 11.9 71 253-332 330-407 (426)
160 3pe7_A Oligogalacturonate lyas 74.1 44 0.0015 29.1 20.6 213 103-334 94-336 (388)
161 1r5m_A SIR4-interacting protei 74.0 45 0.0015 29.2 23.2 97 220-333 227-325 (425)
162 3pe7_A Oligogalacturonate lyas 74.0 44 0.0015 29.1 15.4 105 220-333 168-279 (388)
163 1sq9_A Antiviral protein SKI8; 73.9 45 0.0015 29.1 20.4 68 257-331 199-271 (397)
164 3mmy_A MRNA export factor; mRN 73.9 33 0.0011 29.3 11.3 70 254-333 54-123 (368)
165 3sov_A LRP-6, low-density lipo 73.8 44 0.0015 28.9 25.9 155 145-333 82-245 (318)
166 3k26_A Polycomb protein EED; W 71.7 47 0.0016 28.3 21.0 197 103-330 87-321 (366)
167 3e5z_A Putative gluconolactona 71.4 44 0.0015 27.9 17.6 194 96-332 74-291 (296)
168 3dm0_A Maltose-binding peripla 71.4 75 0.0026 30.6 21.3 182 109-326 492-692 (694)
169 1got_B GT-beta; complex (GTP-b 71.3 49 0.0017 28.4 21.7 182 101-324 154-340 (340)
170 3gre_A Serine/threonine-protei 70.8 57 0.002 29.0 14.2 111 204-333 182-298 (437)
171 1pby_B Quinohemoprotein amine 70.8 47 0.0016 28.0 12.2 100 220-332 11-129 (337)
172 2qc5_A Streptogramin B lactona 70.6 44 0.0015 27.6 20.8 198 95-336 66-268 (300)
173 2fp8_A Strictosidine synthase; 70.5 50 0.0017 28.2 14.2 138 111-274 165-312 (322)
174 2z2n_A Virginiamycin B lyase; 70.5 44 0.0015 27.6 20.5 197 94-334 18-219 (299)
175 3s94_A LRP-6, low-density lipo 69.6 81 0.0028 30.3 23.5 192 97-331 47-247 (619)
176 1npe_A Nidogen, entactin; glyc 69.3 47 0.0016 27.4 18.8 161 144-333 38-204 (267)
177 3ei3_B DNA damage-binding prot 68.8 58 0.002 28.3 19.5 155 145-327 77-236 (383)
178 3o4h_A Acylamino-acid-releasin 68.3 79 0.0027 29.6 16.8 187 100-327 121-315 (582)
179 1egx_A VAsp, vasodilator-stimu 67.8 9.1 0.00031 27.9 5.0 44 111-163 11-54 (115)
180 2ad6_A Methanol dehydrogenase 67.5 37 0.0013 32.2 10.7 119 198-333 57-191 (571)
181 3ow8_A WD repeat-containing pr 66.1 62 0.0021 27.6 19.8 89 221-325 229-319 (321)
182 4gga_A P55CDC, cell division c 65.7 62 0.0021 28.8 11.5 90 231-332 93-183 (420)
183 3v7d_B Cell division control p 65.5 76 0.0026 28.4 27.9 195 99-332 171-386 (464)
184 2kwv_A RAD30 homolog B, DNA po 65.5 3.1 0.00011 24.4 1.6 18 2-19 22-39 (48)
185 3lrv_A PRE-mRNA-splicing facto 65.5 65 0.0022 27.6 13.0 97 221-331 105-205 (343)
186 2fp8_A Strictosidine synthase; 65.4 64 0.0022 27.5 18.7 206 104-336 33-278 (322)
187 2jp2_A Spred-2, sprouty-relate 65.3 9.4 0.00032 28.3 4.7 43 111-162 20-65 (126)
188 2oiz_A Aromatic amine dehydrog 65.2 71 0.0024 27.9 14.0 72 253-335 265-342 (361)
189 3dr2_A Exported gluconolactona 65.0 40 0.0014 28.6 9.7 110 203-334 55-185 (305)
190 3dr2_A Exported gluconolactona 64.9 63 0.0022 27.2 18.7 200 103-336 59-276 (305)
191 4ggc_A P55CDC, cell division c 64.6 61 0.0021 27.0 11.7 59 267-333 46-104 (318)
192 1kb0_A Quinohemoprotein alcoho 62.8 27 0.00092 34.1 8.9 118 198-333 72-205 (677)
193 1rwi_B Serine/threonine-protei 62.8 61 0.0021 26.4 18.8 195 95-333 28-228 (270)
194 4ggc_A P55CDC, cell division c 62.6 66 0.0023 26.7 22.5 200 99-334 34-237 (318)
195 2ojh_A Uncharacterized protein 62.1 63 0.0022 26.3 19.9 186 110-333 21-212 (297)
196 3v65_B Low-density lipoprotein 61.9 86 0.0029 27.8 22.0 191 101-333 87-283 (386)
197 3lrv_A PRE-mRNA-splicing facto 61.7 76 0.0026 27.1 19.5 203 95-332 88-299 (343)
198 1kv9_A Type II quinohemoprotei 61.7 38 0.0013 32.9 9.8 119 198-333 61-193 (668)
199 1erj_A Transcriptional repress 61.2 86 0.0029 27.5 19.8 97 220-329 187-289 (393)
200 2ecf_A Dipeptidyl peptidase IV 61.2 1.2E+02 0.0041 29.2 20.6 190 112-331 264-463 (741)
201 2ynn_A Coatomer subunit beta'; 61.1 73 0.0025 26.7 16.1 101 221-337 36-138 (304)
202 3amr_A 3-phytase; beta-propell 60.5 90 0.0031 27.6 23.7 212 98-335 37-273 (355)
203 4hw6_A Hypothetical protein, I 60.3 99 0.0034 28.0 17.8 148 96-274 145-301 (433)
204 3zwl_B Eukaryotic translation 59.9 80 0.0027 26.8 25.0 195 103-333 88-310 (369)
205 3v64_C Agrin; beta propeller, 59.0 92 0.0031 27.2 26.3 195 97-333 80-282 (349)
206 1xod_A Spred1; sprouty, EVH1, 58.9 7.6 0.00026 28.4 3.2 43 111-162 11-56 (118)
207 1yr2_A Prolyl oligopeptidase; 58.2 1.4E+02 0.0048 29.1 22.7 146 168-333 292-447 (741)
208 3azo_A Aminopeptidase; POP fam 58.1 1.3E+02 0.0044 28.6 20.8 189 111-333 161-375 (662)
209 3dw8_B Serine/threonine-protei 57.2 1E+02 0.0035 27.2 11.5 107 221-334 250-380 (447)
210 3s94_A LRP-6, low-density lipo 57.0 1.4E+02 0.0047 28.6 25.4 195 97-333 356-557 (619)
211 1flg_A Protein (quinoprotein e 56.9 91 0.0031 29.6 11.3 122 198-333 63-199 (582)
212 1jof_A Carboxy-CIS,CIS-muconat 56.1 1E+02 0.0034 26.7 14.6 119 203-333 155-298 (365)
213 4ery_A WD repeat-containing pr 55.6 90 0.0031 26.0 21.3 181 107-326 125-311 (312)
214 1jmx_B Amine dehydrogenase; ox 55.0 95 0.0033 26.1 19.9 29 302-332 260-289 (349)
215 1yiq_A Quinohemoprotein alcoho 54.9 44 0.0015 32.6 8.9 120 198-333 65-198 (689)
216 3dm0_A Maltose-binding peripla 54.7 1.5E+02 0.0052 28.4 22.2 95 220-332 541-637 (694)
217 4hw6_A Hypothetical protein, I 53.5 1.3E+02 0.0044 27.2 14.2 113 198-330 142-262 (433)
218 3sov_A LRP-6, low-density lipo 52.7 1.1E+02 0.0038 26.2 14.1 112 202-333 89-203 (318)
219 1yfq_A Cell cycle arrest prote 52.6 1E+02 0.0035 25.8 12.4 72 253-333 22-95 (342)
220 1ddw_A GLGF-domain protein hom 52.6 44 0.0015 24.4 6.4 41 110-162 10-51 (120)
221 3tc9_A Hypothetical hydrolase; 52.5 1.3E+02 0.0046 27.1 17.1 110 203-333 149-263 (430)
222 3c5m_A Oligogalacturonate lyas 52.1 1.2E+02 0.0039 26.2 15.2 200 110-333 167-390 (396)
223 2iwa_A Glutamine cyclotransfer 51.6 1.1E+02 0.0037 25.8 19.2 162 145-335 24-190 (266)
224 2pm9_A Protein WEB1, protein t 51.0 1.2E+02 0.0042 26.3 18.1 103 221-331 189-298 (416)
225 2ymu_A WD-40 repeat protein; u 49.5 1.6E+02 0.0055 27.1 25.7 96 221-333 408-504 (577)
226 2oaj_A Protein SNI1; WD40 repe 49.4 2.2E+02 0.0074 28.6 15.3 96 221-333 40-135 (902)
227 2ymu_A WD-40 repeat protein; u 48.2 1.7E+02 0.0057 27.0 25.1 96 221-333 449-545 (577)
228 2qc5_A Streptogramin B lactona 47.5 1.2E+02 0.0039 24.9 23.8 197 94-334 23-224 (300)
229 2hes_X YDR267CP; beta-propelle 46.9 1.3E+02 0.0045 25.5 17.8 78 253-338 118-196 (330)
230 3hrp_A Uncharacterized protein 46.8 1.6E+02 0.0054 26.3 21.9 204 96-334 136-361 (409)
231 2xzm_R RACK1; ribosome, transl 46.7 1.4E+02 0.0047 25.5 12.1 73 253-331 38-111 (343)
232 2vdu_B TRNA (guanine-N(7)-)-me 46.2 1.6E+02 0.0055 26.2 21.5 104 221-334 221-349 (450)
233 2z3z_A Dipeptidyl aminopeptida 45.6 2.1E+02 0.0071 27.3 21.3 153 168-333 233-397 (706)
234 3c5m_A Oligogalacturonate lyas 44.9 1.5E+02 0.0051 25.5 14.5 149 168-334 166-336 (396)
235 1qks_A Cytochrome CD1 nitrite 44.7 1.9E+02 0.0066 27.2 11.4 117 202-328 351-478 (567)
236 1yiq_A Quinohemoprotein alcoho 44.0 2.3E+02 0.0079 27.4 15.4 30 199-235 117-148 (689)
237 1kv9_A Type II quinohemoprotei 43.3 2.3E+02 0.008 27.2 14.6 58 171-235 77-144 (668)
238 1i2h_A PSD-ZIP45(homer-1C/VESL 43.2 58 0.002 25.3 6.0 40 111-162 16-56 (168)
239 3v64_C Agrin; beta propeller, 42.9 1.7E+02 0.0057 25.4 22.3 191 101-333 44-240 (349)
240 3gre_A Serine/threonine-protei 42.8 1.4E+02 0.0047 26.3 9.8 70 253-332 181-250 (437)
241 3f3f_A Nucleoporin SEH1; struc 42.8 1.4E+02 0.0049 24.7 25.1 36 299-334 309-345 (351)
242 2oaj_A Protein SNI1; WD40 repe 42.2 2.8E+02 0.0096 27.8 22.0 191 103-332 31-247 (902)
243 3ju4_A Endo-N-acetylneuraminid 41.9 1.5E+02 0.0051 26.9 9.0 62 201-263 346-407 (670)
244 1vyh_C Platelet-activating fac 41.3 1.9E+02 0.0064 25.5 23.7 184 103-331 122-331 (410)
245 1mda_H Methylamine dehydrogena 40.9 1.4E+02 0.0049 26.3 9.3 45 282-331 304-350 (368)
246 3vu4_A KMHSV2; beta-propeller 40.8 1.7E+02 0.006 25.1 21.4 67 253-329 206-273 (355)
247 2p9w_A MAL S 1 allergenic prot 40.5 1.9E+02 0.0064 25.3 10.1 102 220-328 100-216 (334)
248 1ijq_A LDL receptor, low-densi 40.3 1.7E+02 0.0059 24.8 22.8 112 202-333 87-201 (316)
249 2hz6_A Endoplasmic reticulum t 40.0 5.1 0.00017 35.8 -0.5 111 197-331 3-115 (369)
250 3hxj_A Pyrrolo-quinoline quino 40.0 94 0.0032 26.1 7.9 22 98-122 67-88 (330)
251 3frx_A Guanine nucleotide-bind 39.3 1.7E+02 0.0059 24.6 20.3 106 203-328 207-318 (319)
252 2hes_X YDR267CP; beta-propelle 39.2 1.8E+02 0.006 24.6 18.4 66 253-328 164-231 (330)
253 3frx_A Guanine nucleotide-bind 39.1 1.7E+02 0.0059 24.5 22.9 94 220-330 176-270 (319)
254 1nr0_A Actin interacting prote 37.7 2.6E+02 0.009 26.2 19.9 102 220-332 170-275 (611)
255 3dw8_B Serine/threonine-protei 37.6 1.2E+02 0.0043 26.6 8.6 72 253-330 188-261 (447)
256 1w6s_A Methanol dehydrogenase 37.6 1.3E+02 0.0045 28.7 9.0 118 197-331 56-195 (599)
257 2j04_A TAU60, YPL007P, hypothe 37.3 1.3E+02 0.0045 28.6 8.7 32 299-330 132-163 (588)
258 2xdw_A Prolyl endopeptidase; a 36.1 2.3E+02 0.0078 27.3 10.7 83 253-337 83-170 (710)
259 1xfd_A DIP, dipeptidyl aminope 36.1 2.9E+02 0.01 26.3 18.0 36 298-333 256-295 (723)
260 2ghs_A AGR_C_1268P; regucalcin 34.8 2.1E+02 0.0072 24.2 22.8 203 97-335 56-268 (326)
261 1yr2_A Prolyl oligopeptidase; 34.3 2.2E+02 0.0077 27.6 10.4 85 251-335 116-206 (741)
262 3g4e_A Regucalcin; six bladed 33.4 2.1E+02 0.0071 23.8 21.2 139 169-331 34-186 (297)
263 1z68_A Fibroblast activation p 33.2 3.3E+02 0.011 26.0 16.2 203 112-332 225-448 (719)
264 1n7d_A LDL receptor, low-densi 32.1 2.3E+02 0.0079 27.5 9.9 76 145-233 543-618 (699)
265 3p5b_L Low density lipoprotein 31.7 2.7E+02 0.0093 24.6 20.4 111 203-333 170-283 (400)
266 1qc6_A EVH1 domain from ENA/VA 30.9 69 0.0023 23.6 4.6 43 111-162 11-53 (130)
267 3iuj_A Prolyl endopeptidase; h 30.0 3.8E+02 0.013 25.7 16.9 102 221-335 260-367 (693)
268 1kb0_A Quinohemoprotein alcoho 29.4 3.9E+02 0.013 25.7 20.3 25 100-124 127-151 (677)
269 2qe8_A Uncharacterized protein 29.4 2.7E+02 0.0091 23.8 10.0 121 203-333 27-160 (343)
270 2dk7_A Transcription elongatio 29.1 51 0.0018 21.6 3.1 21 309-329 21-41 (73)
271 2pbi_B Guanine nucleotide-bind 27.6 2.9E+02 0.0099 23.6 23.0 97 220-330 176-274 (354)
272 2p4o_A Hypothetical protein; p 27.5 2.7E+02 0.0092 23.2 23.8 195 100-333 41-247 (306)
273 2qe8_A Uncharacterized protein 27.3 2.9E+02 0.0099 23.5 13.3 75 199-274 71-153 (343)
274 3o4h_A Acylamino-acid-releasin 26.5 3.8E+02 0.013 24.7 26.4 183 110-331 43-231 (582)
275 2be1_A Serine/threonine-protei 26.4 1.2E+02 0.0041 26.6 6.1 24 202-232 110-133 (339)
276 3tc9_A Hypothetical hydrolase; 26.4 3.5E+02 0.012 24.2 16.3 142 96-263 143-291 (430)
277 2w18_A PALB2, fancn, partner a 25.6 3E+02 0.01 24.2 8.5 70 254-330 53-147 (356)
278 2xyi_A Probable histone-bindin 25.5 3.5E+02 0.012 23.8 12.2 67 253-328 243-310 (430)
279 4h5i_A Guanine nucleotide-exch 24.7 3.3E+02 0.011 23.4 17.0 77 203-289 280-359 (365)
280 2oit_A Nucleoporin 214KDA; NH2 24.3 3.3E+02 0.011 24.3 9.0 62 254-328 162-224 (434)
281 2bkl_A Prolyl endopeptidase; m 23.2 3.9E+02 0.013 25.5 9.8 78 252-331 78-160 (695)
282 3no2_A Uncharacterized protein 23.1 3.2E+02 0.011 22.5 18.4 142 169-334 14-162 (276)
283 1mda_H Methylamine dehydrogena 22.8 2.5E+02 0.0087 24.7 7.7 72 254-336 32-115 (368)
284 3syx_A Sprouty-related, EVH1 d 22.6 1.5E+02 0.005 21.9 4.9 18 111-128 18-35 (130)
285 2ecf_A Dipeptidyl peptidase IV 22.6 5E+02 0.017 24.7 21.9 103 221-328 264-370 (741)
286 2ece_A 462AA long hypothetical 22.3 4.6E+02 0.016 24.1 18.6 60 252-315 330-399 (462)
287 3hxj_A Pyrrolo-quinoline quino 21.8 3.4E+02 0.012 22.4 8.4 28 200-234 104-132 (330)
288 2j04_A TAU60, YPL007P, hypothe 21.5 5.3E+02 0.018 24.5 17.6 116 202-335 139-262 (588)
289 2xzm_R RACK1; ribosome, transl 21.5 3.6E+02 0.012 22.6 20.9 94 221-331 195-289 (343)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.40 E-value=5.5e-11 Score=106.79 Aligned_cols=195 Identities=13% Similarity=0.114 Sum_probs=128.9
Q ss_pred eEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEE-e---cccceeEEEEEEcCCCcEEecCC
Q 017755 112 GMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQ-S---YKVDYLEVIIYSLKADTWRRTRE 187 (366)
Q Consensus 112 ~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~-~---~~~~~~~~~vyss~~~~W~~~~~ 187 (366)
.++++||.|++|..+|+++... .. .....+ + + ++..+.- . .......+++|+..+++|+.+++
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r-~~-----~~~~~~--~---~--~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 134 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPR-CL-----FGLGEA--L---N--SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP 134 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCE-ES-----CEEEEE--T---T--EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC
T ss_pred ceEEecCCCCeEEECCCCCcch-hc-----eeEEEE--C---C--EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC
Confidence 3889999999999999887553 11 111111 1 2 3333322 1 12345678999999999999988
Q ss_pred CCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCCC
Q 017755 188 FPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDEP 266 (366)
Q Consensus 188 ~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~ 266 (366)
+|...... ..+.++|++|.++...........+.+||+.+++|+.+ ++|... .....+..+|+|+++.......
T Consensus 135 ~p~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~ 209 (315)
T 4asc_A 135 LPYVVYGH--TVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR---SLFGATVHDGRIIVAAGVTDTG 209 (315)
T ss_dssp CSSCCBSC--EEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEEEEECSSS
T ss_pred CCCcccce--eEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch---hceEEEEECCEEEEEeccCCCC
Confidence 77654332 36789999999998743333335899999999999998 566544 3446677899999998865432
Q ss_pred -eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC---------------CeEEEEECCCCcE
Q 017755 267 -RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS---------------RCLHWYNLKDHKQ 330 (366)
Q Consensus 267 -~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~---------------~~l~~ydl~t~~~ 330 (366)
.-++|.++.. ..+|+.+..++... ....++.. ++. |++.... ..+..||+++++|
T Consensus 210 ~~~~~~~yd~~--~~~W~~~~~~p~~r-----~~~~~~~~-~~~-l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 210 LTSSAEVYSIT--DNKWAPFEAFPQER-----SSLSLVSL-VGT-LYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp EEEEEEEEETT--TTEEEEECCCSSCC-----BSCEEEEE-TTE-EEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred ccceEEEEECC--CCeEEECCCCCCcc-----cceeEEEE-CCE-EEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 2378888752 46899875432222 12222222 444 5544211 2389999999999
Q ss_pred EEE
Q 017755 331 DVI 333 (366)
Q Consensus 331 ~~v 333 (366)
+.+
T Consensus 281 ~~~ 283 (315)
T 4asc_A 281 EGV 283 (315)
T ss_dssp EEE
T ss_pred hhh
Confidence 999
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.39 E-value=1.2e-10 Score=104.63 Aligned_cols=194 Identities=12% Similarity=0.184 Sum_probs=128.0
Q ss_pred EEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEe---cccceeEEEEEEcCCCcEEecCCCC
Q 017755 113 MSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQS---YKVDYLEVIIYSLKADTWRRTREFP 189 (366)
Q Consensus 113 ~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~---~~~~~~~~~vyss~~~~W~~~~~~p 189 (366)
++++||.+++|..+|+++... . ......+ + + ++..+.-. .......+++|++.+++|+.++.+|
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r-~-----~~~~~~~--~---~--~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p 146 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSAR-C-----LFGLGEV--D---D--KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP 146 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCB-C-----SCEEEEE--T---T--EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS
T ss_pred EEEEeCCCCcEEECCCCCccc-c-----ccceEEE--C---C--EEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC
Confidence 889999999999999887654 1 1122111 1 2 33333322 2234467999999999999998877
Q ss_pred ceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCCC-e
Q 017755 190 YYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDEP-R 267 (366)
Q Consensus 190 ~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~-~ 267 (366)
...... ..++++|++|.++...........+.+||+.+++|+.+ ++|... .....+..+|+|+++....... .
T Consensus 147 ~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~ 221 (318)
T 2woz_A 147 IKVYGH--NVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR---SMFGVAIHKGKIVIAGGVTEDGLS 221 (318)
T ss_dssp SCEESC--EEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEEEEEETTEEE
T ss_pred Cccccc--EEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc---ccceEEEECCEEEEEcCcCCCCcc
Confidence 665443 36789999999997643222235799999999999998 555443 2345677899999998754421 2
Q ss_pred EEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc---------------CCeEEEEECCCCcEEE
Q 017755 268 CDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH---------------SRCLHWYNLKDHKQDV 332 (366)
Q Consensus 268 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~---------------~~~l~~ydl~t~~~~~ 332 (366)
-++|.++. ...+|+++..++... ..+.++. -++. |++... ...+..||+++++|+.
T Consensus 222 ~~~~~yd~--~~~~W~~~~~~p~~r-----~~~~~~~-~~~~-i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 222 ASVEAFDL--KTNKWEVMTEFPQER-----SSISLVS-LAGS-LYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp EEEEEEET--TTCCEEECCCCSSCC-----BSCEEEE-ETTE-EEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred ceEEEEEC--CCCeEEECCCCCCcc-----cceEEEE-ECCE-EEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 46777775 246799865433221 1222222 2444 555421 1249999999999999
Q ss_pred E
Q 017755 333 I 333 (366)
Q Consensus 333 v 333 (366)
+
T Consensus 293 ~ 293 (318)
T 2woz_A 293 M 293 (318)
T ss_dssp E
T ss_pred h
Confidence 9
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.37 E-value=1.9e-10 Score=102.53 Aligned_cols=197 Identities=11% Similarity=0.149 Sum_probs=128.9
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEE-EecccceeEEEEEEcCCCcEEecCCCC
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRII-QSYKVDYLEVIIYSLKADTWRRTREFP 189 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~-~~~~~~~~~~~vyss~~~~W~~~~~~p 189 (366)
..+.++||.+++|..+|+++... . ......+ + + +++.+. .........+++|++.+++|+.++.+|
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r-~-----~~~~~~~--~---~--~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p 143 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRR-S-----TLGAAVL--N---G--LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMN 143 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCC-B-----SCEEEEE--T---T--EEEEEEEECSSCEEEEEEEEETTTTEEEEECCCS
T ss_pred cceEEECCCCCceeeCCCCCccc-c-----ceEEEEE--C---C--EEEEEcCCCCCccCceEEEEeCCCCeEeecCCCC
Confidence 46899999999999999877654 1 1122111 1 2 333333 222234467999999999999998877
Q ss_pred ceeecCCCCceEECCeEEEEEeeCCCC-CCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCCC-
Q 017755 190 YYILDDRCNGVFIAGALHWLAARGSVR-TGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDEP- 266 (366)
Q Consensus 190 ~~~~~~~~~~v~~~G~lyw~~~~~~~~-~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~- 266 (366)
...... ..+.++|++|.++...... .....+..||+.+++|+.+ ++|... .....+..+|+|+++.......
T Consensus 144 ~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 144 TRRSSV--GVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR---SGAGVGVLNNLLYAVGGHDGPLV 218 (302)
T ss_dssp SCCBSC--EEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCBSSSSB
T ss_pred CcccCc--eEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc---ccccEEEECCEEEEECCCCCCcc
Confidence 554332 3678899999998764321 1124799999999999998 555544 3446777899999998764321
Q ss_pred eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-C-----CeEEEEECCCCcEEEEE
Q 017755 267 RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-S-----RCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 267 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~-----~~l~~ydl~t~~~~~v~ 334 (366)
.-++|.++.. ..+|+.+..++... ....++.. ++. |++... . ..+..||+++++|+.+.
T Consensus 219 ~~~~~~yd~~--~~~W~~~~~~~~~r-----~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 219 RKSVEVYDPT--TNAWRQVADMNMCR-----RNAGVCAV-NGL-LYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp CCCEEEEETT--TTEEEEECCCSSCC-----BSCEEEEE-TTE-EEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred cceEEEEeCC--CCCEeeCCCCCCcc-----ccCeEEEE-CCE-EEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 2367777752 46799875433222 11122222 455 665542 1 24999999999999983
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.37 E-value=1.4e-10 Score=103.64 Aligned_cols=198 Identities=9% Similarity=-0.027 Sum_probs=129.3
Q ss_pred CceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEe--cccceeEEEEEEcCCCcEEecCC
Q 017755 110 RLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQS--YKVDYLEVIIYSLKADTWRRTRE 187 (366)
Q Consensus 110 ~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~--~~~~~~~~~vyss~~~~W~~~~~ 187 (366)
...+.++||.|++|..+|+++... . ....+.+ + + +++.+.-. .......+++|++.+++|+.+..
T Consensus 69 ~~~~~~~d~~~~~W~~~~~~p~~r-~-----~~~~~~~--~---~--~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~ 135 (306)
T 3ii7_A 69 IKRMDCYNVVKDSWYSKLGPPTPR-D-----SLAACAA--E---G--KIYTSGGSEVGNSALYLFECYDTRTESWHTKPS 135 (306)
T ss_dssp CCEEEEEETTTTEEEEEECCSSCC-B-----SCEEEEE--T---T--EEEEECCBBTTBSCCCCEEEEETTTTEEEEECC
T ss_pred cceEEEEeCCCCeEEECCCCCccc-c-----ceeEEEE--C---C--EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC
Confidence 357899999999999998877554 1 1122122 1 2 33333221 22344679999999999999988
Q ss_pred CCceeecCCCCceEECCeEEEEEeeCCCCCC---cceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecC
Q 017755 188 FPYYILDDRCNGVFIAGALHWLAARGSVRTG---QNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYH 263 (366)
Q Consensus 188 ~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~---~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~ 263 (366)
+|...... ..+.++|++|.++........ ...+.+||+.+++|+.+ ++|... .....+.++|+|+++....
T Consensus 136 ~p~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~ 210 (306)
T 3ii7_A 136 MLTQRCSH--GMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR---KNHGLVFVKDKIFAVGGQN 210 (306)
T ss_dssp CSSCCBSC--EEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCEE
T ss_pred CcCCccee--EEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh---hcceEEEECCEEEEEeCCC
Confidence 77654333 367889999999976432211 35799999999999998 555544 3456777899999997754
Q ss_pred CCC-eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEEEEE
Q 017755 264 DEP-RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 264 ~~~-~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~~v~ 334 (366)
... .-++|.++.. ..+|+.+..++... .....++. ++. |++... ...+..||+++++|+.+.
T Consensus 211 ~~~~~~~~~~yd~~--~~~W~~~~~~p~~r-----~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 211 GLGGLDNVEYYDIK--LNEWKMVSPMPWKG-----VTVKCAAV-GSI-VYVLAGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp TTEEBCCEEEEETT--TTEEEECCCCSCCB-----SCCEEEEE-TTE-EEEEECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred CCCCCceEEEeeCC--CCcEEECCCCCCCc-----cceeEEEE-CCE-EEEEeCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 321 2357777752 46798775333222 12222222 455 555542 135999999999999994
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.35 E-value=3.2e-10 Score=100.93 Aligned_cols=196 Identities=10% Similarity=0.073 Sum_probs=128.3
Q ss_pred ceEEEEcCCCcc---eEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEE-ecccceeEEEEEEcCCCcEEecC
Q 017755 111 LGMSVFNPTTKK---FKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQ-SYKVDYLEVIIYSLKADTWRRTR 186 (366)
Q Consensus 111 ~~~~V~NP~t~~---~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~-~~~~~~~~~~vyss~~~~W~~~~ 186 (366)
..++++||.+++ |..+++++... .. ..... ++ + +++.+.. ........+++|++.+++|+.++
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r-~~-----~~~~~--~~----~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 144 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRR-GL-----AGATT--LG----D-MIYVSGGFDGSRRHTSMERYDPNIDQWSMLG 144 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCC-BS-----CEEEE--ET----T-EEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCc-cc-----eeEEE--EC----C-EEEEEcccCCCcccceEEEEcCCCCeEEECC
Confidence 479999999999 99998877654 21 11111 11 2 3444332 12223457999999999999998
Q ss_pred CCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCC
Q 017755 187 EFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDE 265 (366)
Q Consensus 187 ~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~ 265 (366)
.+|...... ..+.++|++|.++...... ....+.+||+.+++|+.+ ++|... .....+..+|+|+++......
T Consensus 145 ~~p~~r~~~--~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~ 218 (301)
T 2vpj_A 145 DMQTAREGA--GLVVASGVIYCLGGYDGLN-ILNSVEKYDPHTGHWTNVTPMATKR---SGAGVALLNDHIYVVGGFDGT 218 (301)
T ss_dssp ECSSCCBSC--EEEEETTEEEEECCBCSSC-BCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCBCSS
T ss_pred CCCCCcccc--eEEEECCEEEEECCCCCCc-ccceEEEEeCCCCcEEeCCCCCccc---ccceEEEECCEEEEEeCCCCC
Confidence 776544332 3678899999998765321 235799999999999998 555544 344677789999999886432
Q ss_pred C-eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-C-----CeEEEEECCCCcEEEEE
Q 017755 266 P-RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-S-----RCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 266 ~-~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~-----~~l~~ydl~t~~~~~v~ 334 (366)
. .-++|.++- ...+|.++..++... .....+.. ++. |++... + ..+..||+++++|+.+.
T Consensus 219 ~~~~~v~~yd~--~~~~W~~~~~~p~~r-----~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 219 AHLSSVEAYNI--RTDSWTTVTSMTTPR-----CYVGATVL-RGR-LYAIAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp SBCCCEEEEET--TTTEEEEECCCSSCC-----BSCEEEEE-TTE-EEEECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred cccceEEEEeC--CCCcEEECCCCCCcc-----cceeEEEE-CCE-EEEEcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 1 236777765 246798775433222 12222222 455 665542 1 24899999999999984
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.33 E-value=2.5e-10 Score=102.16 Aligned_cols=196 Identities=9% Similarity=0.110 Sum_probs=127.9
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEE-EecccceeEEEEEEcCCCcEEecCCCC
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRII-QSYKVDYLEVIIYSLKADTWRRTREFP 189 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~-~~~~~~~~~~~vyss~~~~W~~~~~~p 189 (366)
..+.++||.|++|..+|+++... . ......+ + + +++.+. .........+++|++.+++|+.++.+|
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r-~-----~~~~~~~--~---~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 156 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPR-N-----RIGVGVI--D---G--HIYAVGGSHGCIHHNSVERYEPERDEWHLVAPML 156 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCC-B-----TCEEEEE--T---T--EEEEECCEETTEECCCEEEEETTTTEEEECCCCS
T ss_pred ceEEEECCCCCeEeECCCCCcCc-c-----ccEEEEE--C---C--EEEEEcCCCCCcccccEEEECCCCCeEeECCCCC
Confidence 46899999999999999877654 1 1122111 1 2 333332 222223456899999999999998877
Q ss_pred ceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCC-Ce
Q 017755 190 YYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDE-PR 267 (366)
Q Consensus 190 ~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~-~~ 267 (366)
...... ..++++|++|.++....... ...+..||+.+++|+.+ ++|... .....+.++|+|+++...... ..
T Consensus 157 ~~r~~~--~~~~~~~~iyv~GG~~~~~~-~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~ 230 (308)
T 1zgk_A 157 TRRIGV--GVAVLNRLLYAVGGFDGTNR-LNSAECYYPERNEWRMITAMNTIR---SGAGVCVLHNCIYAAGGYDGQDQL 230 (308)
T ss_dssp SCCBSC--EEEEETTEEEEECCBCSSCB-CCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEECCBCSSSBC
T ss_pred ccccce--EEEEECCEEEEEeCCCCCCc-CceEEEEeCCCCeEeeCCCCCCcc---ccceEEEECCEEEEEeCCCCCCcc
Confidence 554432 36788999999987653221 35799999999999988 555443 244567779999999875432 13
Q ss_pred EEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEEEEE
Q 017755 268 CDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 268 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~~v~ 334 (366)
-++|+++.. ..+|+++..++... ....+++. ++. |++... ...+..||+++++|+.+.
T Consensus 231 ~~v~~yd~~--~~~W~~~~~~p~~r-----~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 231 NSVERYDVE--TETWTFVAPMKHRR-----SALGITVH-QGR-IYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp CCEEEEETT--TTEEEECCCCSSCC-----BSCEEEEE-TTE-EEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeCC--CCcEEECCCCCCCc-----cceEEEEE-CCE-EEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 467777752 46798765333221 11122222 455 665532 135999999999999984
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.29 E-value=4.2e-10 Score=100.45 Aligned_cols=198 Identities=11% Similarity=0.111 Sum_probs=129.4
Q ss_pred CceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCC
Q 017755 110 RLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFP 189 (366)
Q Consensus 110 ~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p 189 (366)
...+.++||.+++|..+++++... .. .....+ + + +++.+.-........+++|+..+++|+.+..+|
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r-~~-----~~~~~~--~----~-~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKR-RD-----AACVFW--D----N-VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCC-BS-----CEEEEE--T----T-EEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred CceEEEecCCCCCEecCCCCCccc-ce-----eEEEEE--C----C-EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 457899999999999998877654 21 111111 1 2 233332211234567899999999999998877
Q ss_pred ceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCCC--
Q 017755 190 YYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDEP-- 266 (366)
Q Consensus 190 ~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~-- 266 (366)
...... ..+.++|++|.++...........+..||+.+++|+.+ ++|... .....+..+|+|+++.......
T Consensus 90 ~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 90 TPRDSL--AACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR---CSHGMVEANGLIYVCGGSLGNNVS 164 (306)
T ss_dssp SCCBSC--EEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCEESCTTT
T ss_pred ccccce--eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc---ceeEEEEECCEEEEECCCCCCCCc
Confidence 554433 36788999999998653333345799999999999998 566544 3445677899999998753321
Q ss_pred ---eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEEEEE
Q 017755 267 ---RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 267 ---~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~~v~ 334 (366)
.-++|.++.. ..+|+++..++... ..+.+++. ++. |++... ...+..||+++++|+.+.
T Consensus 165 ~~~~~~~~~yd~~--~~~W~~~~~~p~~r-----~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 165 GRVLNSCEVYDPA--TETWTELCPMIEAR-----KNHGLVFV-KDK-IFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp CEECCCEEEEETT--TTEEEEECCCSSCC-----BSCEEEEE-TTE-EEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred ccccceEEEeCCC--CCeEEECCCccchh-----hcceEEEE-CCE-EEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 2457777752 46799875332221 12222222 444 665531 124999999999999983
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.22 E-value=1.3e-09 Score=97.14 Aligned_cols=196 Identities=11% Similarity=0.125 Sum_probs=126.9
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEE-ecccceeEEEEEEcCCCcEEecCCCC
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQ-SYKVDYLEVIIYSLKADTWRRTREFP 189 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~-~~~~~~~~~~vyss~~~~W~~~~~~p 189 (366)
..+.++||.+++|..+++++... .. .....+ + + +++.+.- ........+++|+..+++|+.++.+|
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r-~~-----~~~~~~--~----~-~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p 96 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRR-CR-----AGMVYM--A----G-LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR 96 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCC-BS-----CEEEEE--T----T-EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred CcEEEEcCcCCcEeEcccCCccc-cc-----ceEEEE--C----C-EEEEEeCcCCCccccceEEECCCCCceeeCCCCC
Confidence 46889999999999998777554 11 111111 1 2 2333321 11223456899999999999999877
Q ss_pred ceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCCC--
Q 017755 190 YYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDEP-- 266 (366)
Q Consensus 190 ~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~-- 266 (366)
...... ..+.++|++|.++...... ....+..||+.+++|+.+ ++|... .....+.++|+|+++.......
T Consensus 97 ~~r~~~--~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 97 DRRSTL--GAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNTRR---SSVGVGVVGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp SCCBSC--EEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCEETTTTE
T ss_pred ccccce--EEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCCcc---cCceEEEECCEEEEEeCCCCCCCc
Confidence 654432 3678899999999865321 224789999999999998 555543 3446677899999998753321
Q ss_pred -eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEEEEE
Q 017755 267 -RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 267 -~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~~v~ 334 (366)
.-++|.++.. ..+|+++..++... ..+..++. ++. |++... ...+..||+++++|+.+.
T Consensus 171 ~~~~~~~yd~~--~~~W~~~~~~p~~r-----~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 171 CLSTVECYNAT--TNEWTYIAEMSTRR-----SGAGVGVL-NNL-LYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp ECCCEEEEETT--TTEEEEECCCSSCC-----BSCEEEEE-TTE-EEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred cccEEEEEeCC--CCcEEECCCCcccc-----ccccEEEE-CCE-EEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 2357777752 46799875333221 12222222 454 666542 124999999999999984
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.22 E-value=9.2e-10 Score=98.43 Aligned_cols=199 Identities=8% Similarity=0.041 Sum_probs=126.6
Q ss_pred CceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEE---ecccceeEEEEEEcCCCcEEecC
Q 017755 110 RLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQ---SYKVDYLEVIIYSLKADTWRRTR 186 (366)
Q Consensus 110 ~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~---~~~~~~~~~~vyss~~~~W~~~~ 186 (366)
...+.++||.+++|..+++++... .. .....+ + +...|+.-.. ........+++|+..+++|+.++
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r-~~-----~~~~~~--~---~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 106 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPR-SG-----LAGCVV--G---GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA 106 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCC-BS-----CEEEEE--T---TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC
T ss_pred cceEEEEcCCCCeEeECCCCCccc-cc-----ceEEEE--C---CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECC
Confidence 346899999999999998877654 11 111111 1 2222222111 11123356899999999999998
Q ss_pred CCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCC
Q 017755 187 EFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDE 265 (366)
Q Consensus 187 ~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~ 265 (366)
.+|...... ..+.++|++|.++...... ....+..||+.+++|+.+ ++|... .....+.++|+|+++......
T Consensus 107 ~~p~~r~~~--~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~ 180 (308)
T 1zgk_A 107 PMSVPRNRI--GVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPMLTRR---IGVGVAVLNRLLYAVGGFDGT 180 (308)
T ss_dssp CCSSCCBTC--EEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEECCBCSS
T ss_pred CCCcCcccc--EEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCCccc---cceEEEEECCEEEEEeCCCCC
Confidence 877654332 3678899999998754321 124799999999999988 566544 244566779999999875432
Q ss_pred C-eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEEEEE
Q 017755 266 P-RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 266 ~-~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~~v~ 334 (366)
. .-++|.++. ...+|+.+..++... .....++. ++. |++... ...+..||+++++|+.+.
T Consensus 181 ~~~~~~~~yd~--~~~~W~~~~~~p~~r-----~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 181 NRLNSAECYYP--ERNEWRMITAMNTIR-----SGAGVCVL-HNC-IYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp CBCCCEEEEET--TTTEEEECCCCSSCC-----BSCEEEEE-TTE-EEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred CcCceEEEEeC--CCCeEeeCCCCCCcc-----ccceEEEE-CCE-EEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 1 235777775 246898764332221 12222222 444 666542 134999999999999984
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.21 E-value=3.2e-09 Score=95.19 Aligned_cols=200 Identities=12% Similarity=0.066 Sum_probs=124.3
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEe---c--ccceeEEEEEEcCCCcEEec
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQS---Y--KVDYLEVIIYSLKADTWRRT 185 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~---~--~~~~~~~~vyss~~~~W~~~ 185 (366)
..+.++||.|++|.. ++.+... ++ .... ... ..+...|+.-... . ......+++|+..+++|+.+
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~-~r----~~~~-~~~---~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQV-PK----NHVS-LVT---KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCS-CS----SEEE-EEC---TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred CceEEECCCCCeEec-CCCCCCC-Cc----cceE-EEE---ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 678999999999976 3332211 11 1111 111 1233333333211 1 11223489999999999999
Q ss_pred CCCCceeecCCCCceEECCeEEEEEeeCC--CCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEec
Q 017755 186 REFPYYILDDRCNGVFIAGALHWLAARGS--VRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYY 262 (366)
Q Consensus 186 ~~~p~~~~~~~~~~v~~~G~lyw~~~~~~--~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~ 262 (366)
+.+|...... ..+.++|++|.++.... .......+..||+.+.+|+.+ ++|... .....+..+|+|+++...
T Consensus 83 ~~~p~~r~~~--~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~ 157 (315)
T 4asc_A 83 PPLPSPRCLF--GLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV---YGHTVLSHMDLVYVIGGK 157 (315)
T ss_dssp CCBSSCEESC--EEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC---BSCEEEEETTEEEEECCB
T ss_pred CCCCcchhce--eEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc---cceeEEEECCEEEEEeCC
Confidence 8887655443 36788999999998542 122235799999999999988 666554 344667789999999886
Q ss_pred C-C-CCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEE-cC-----CeEEEEECCCCcEEEEE
Q 017755 263 H-D-EPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQ-HS-----RCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 263 ~-~-~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~-----~~l~~ydl~t~~~~~v~ 334 (366)
. . ...-++|.++.. ..+|+++..++... ..+..++. ++. |++.. .. ..+..||+++++|+.+.
T Consensus 158 ~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r-----~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPK--KFEWKELAPMQTAR-----SLFGATVH-DGR-IIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp CTTSCBCCCEEEEETT--TTEEEECCCCSSCC-----BSCEEEEE-TTE-EEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred CCCCcccceEEEEeCC--CCeEEECCCCCCch-----hceEEEEE-CCE-EEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 2 2 112367888752 46798765332221 12222222 455 55543 21 24999999999999984
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.19 E-value=2.8e-09 Score=94.82 Aligned_cols=196 Identities=9% Similarity=0.104 Sum_probs=127.2
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEE-ecccceeEEEEEEcCCCc---EEecC
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQ-SYKVDYLEVIIYSLKADT---WRRTR 186 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~-~~~~~~~~~~vyss~~~~---W~~~~ 186 (366)
..++++||.+++|..+|+.+... . ...... .+ + +++.+.. ........+++|+..+++ |+.+.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r-~-----~~~~~~--~~----~-~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~ 97 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKR-R-----YVASVS--LH----D-RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA 97 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCC-B-----SCEEEE--ET----T-EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC
T ss_pred eEEEEEcCCCCeEEeCCCCChhh-c-----cccEEE--EC----C-EEEEEcCCCCCccCceEEEEECCCCCCCeeEECC
Confidence 47899999999999999776543 1 111111 11 2 3333322 122234578999999999 99998
Q ss_pred CCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCC
Q 017755 187 EFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDE 265 (366)
Q Consensus 187 ~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~ 265 (366)
.+|...... ..+.++|++|.++...... ....+..||+.+++|+.+ ++|... .....+..+|+|+++......
T Consensus 98 ~~p~~r~~~--~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~ 171 (301)
T 2vpj_A 98 PMNVRRGLA--GATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGDMQTAR---EGAGLVVASGVIYCLGGYDGL 171 (301)
T ss_dssp CCSSCCBSC--EEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEEECSSCC---BSCEEEEETTEEEEECCBCSS
T ss_pred CCCCCccce--eEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECCCCCCCc---ccceEEEECCEEEEECCCCCC
Confidence 877654332 3678899999998765321 124799999999999988 566544 244566779999999875432
Q ss_pred C-eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEEEEE
Q 017755 266 P-RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 266 ~-~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~~v~ 334 (366)
. .-++|.++.. ..+|+++..++... ..+..+.. ++. |++... ...+..||+++++|+.+.
T Consensus 172 ~~~~~~~~~d~~--~~~W~~~~~~p~~r-----~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 172 NILNSVEKYDPH--TGHWTNVTPMATKR-----SGAGVALL-NDH-IYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp CBCCCEEEEETT--TTEEEEECCCSSCC-----BSCEEEEE-TTE-EEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred cccceEEEEeCC--CCcEEeCCCCCccc-----ccceEEEE-CCE-EEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 1 2367777752 46898874332211 12222222 444 666542 134999999999999984
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.13 E-value=4.2e-09 Score=96.05 Aligned_cols=214 Identities=11% Similarity=0.032 Sum_probs=124.2
Q ss_pred cceEEeee--cCceEEEEcCC--CcceEecCCCC-CCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEe----cccceeE
Q 017755 101 HGLLAMFN--RRLGMSVFNPT--TKKFKLFPQFW-SDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQS----YKVDYLE 171 (366)
Q Consensus 101 nGLl~~~~--~~~~~~V~NP~--t~~~~~lP~~~-~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~----~~~~~~~ 171 (366)
+|.|.+.. ....++++||. +++|..+|+++ ..+ . ......+ + +...|+.-... .......
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R-~-----~~~~~~~--~---~~lyv~GG~~~~~~~~~~~~~~ 87 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPR-D-----QATSAFI--D---GNLYVFGGIGKNSEGLTQVFND 87 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCC-B-----SCEEEEE--T---TEEEEECCEEECTTSCEEECCC
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcC-c-----cceEEEE--C---CEEEEEcCCCCCCCccceeecc
Confidence 56554432 34579999998 49999999877 343 1 1122222 2 22222222211 1122357
Q ss_pred EEEEEcCCCcEEecCCCC-ceeecCCCCceEECCeEEEEEeeCCCC---------------------------------C
Q 017755 172 VIIYSLKADTWRRTREFP-YYILDDRCNGVFIAGALHWLAARGSVR---------------------------------T 217 (366)
Q Consensus 172 ~~vyss~~~~W~~~~~~p-~~~~~~~~~~v~~~G~lyw~~~~~~~~---------------------------------~ 217 (366)
+++|+..+++|+.++.++ ..... ...+.++|++|.++...... .
T Consensus 88 v~~yd~~~~~W~~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 2uvk_A 88 VHKYNPKTNSWVKLMSHAPMGMAG--HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYF 165 (357)
T ss_dssp EEEEETTTTEEEECSCCCSSCCSS--EEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGC
T ss_pred EEEEeCCCCcEEECCCCCCccccc--ceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccC
Confidence 899999999999998776 22221 23567999999999754210 0
Q ss_pred CcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCC--CeEEEEEEeecCCCCCeeEEEEecCCCCC
Q 017755 218 GQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDE--PRCDIWVMKEYGSQQSWSKLCSFSKMLHE 294 (366)
Q Consensus 218 ~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~--~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 294 (366)
....+.+||+.+++|+.+ ++|.... ....++..+|+|+++...... ..-++|.++-.....+|+++..++.+.
T Consensus 166 ~~~~v~~yd~~~~~W~~~~~~p~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~-- 241 (357)
T 2uvk_A 166 FNKFLLSFDPSTQQWSYAGESPWYGT--AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPD-- 241 (357)
T ss_dssp CCCEEEEEETTTTEEEEEEECSSCCC--BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTT--
T ss_pred CcccEEEEeCCCCcEEECCCCCCCCc--ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCc--
Confidence 124899999999999988 6664331 125677789999999764321 123567665211246798765442221
Q ss_pred CcceeEEEEEEeCCCeEEEEEcC-----------------------CeEEEEECCCCcEEEEE
Q 017755 295 TCYYTEAFAFSKDGDKALIYQHS-----------------------RCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 295 ~~~~~~~~~~~~~g~~i~l~~~~-----------------------~~l~~ydl~t~~~~~v~ 334 (366)
....+.+ +..++. |++.... ..+..||+++++|+.+.
T Consensus 242 -~~~~~~~-~~~~~~-iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 242 -GVAGGFA-GISNDS-LIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp -CCBSCEE-EEETTE-EEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred -ccccceE-EEECCE-EEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 1112112 222454 6655421 13889999999999984
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.05 E-value=2.5e-08 Score=89.37 Aligned_cols=150 Identities=14% Similarity=0.178 Sum_probs=101.0
Q ss_pred EEEEEEcCCCcEEecCCCCceeecCCCCceEECCeEEEEEeeCC-CCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeE
Q 017755 171 EVIIYSLKADTWRRTREFPYYILDDRCNGVFIAGALHWLAARGS-VRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQ 248 (366)
Q Consensus 171 ~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~-~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~ 248 (366)
.+++|+..+++|+.++.+|...... ..+.++|++|.++.... .......+.+||+.+.+|+.+ ++|... ....
T Consensus 79 ~~~~~d~~~~~W~~~~~~p~~r~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~ 153 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLPSARCLF--GLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV---YGHN 153 (318)
T ss_dssp EEEEEETTTTEEEECSCBSSCBCSC--EEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE---ESCE
T ss_pred cEEEEeCCCCcEEECCCCCcccccc--ceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc---cccE
Confidence 4899999999999998877654432 36788999999998752 112235799999999999998 566554 2345
Q ss_pred EEEECCEEEEEEecCC--CCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc--C----CeE
Q 017755 249 VGVLRGCLWINSYYHD--EPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH--S----RCL 320 (366)
Q Consensus 249 l~~~~G~L~~v~~~~~--~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~--~----~~l 320 (366)
.+..+|+|+++..... ...-++|.++.. ..+|+++..++... ..+..++. ++. |++... . ..+
T Consensus 154 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r-----~~~~~~~~-~~~-iyv~GG~~~~~~~~~~ 224 (318)
T 2woz_A 154 VISHNGMIYCLGGKTDDKKCTNRVFIYNPK--KGDWKDLAPMKTPR-----SMFGVAIH-KGK-IVIAGGVTEDGLSASV 224 (318)
T ss_dssp EEEETTEEEEECCEESSSCBCCCEEEEETT--TTEEEEECCCSSCC-----BSCEEEEE-TTE-EEEEEEEETTEEEEEE
T ss_pred EEEECCEEEEEcCCCCCCCccceEEEEcCC--CCEEEECCCCCCCc-----ccceEEEE-CCE-EEEEcCcCCCCccceE
Confidence 6668999999987422 112367888753 46799875332211 11222222 455 555432 1 248
Q ss_pred EEEECCCCcEEEEE
Q 017755 321 HWYNLKDHKQDVIE 334 (366)
Q Consensus 321 ~~ydl~t~~~~~v~ 334 (366)
..||+++++|+.+.
T Consensus 225 ~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 225 EAFDLKTNKWEVMT 238 (318)
T ss_dssp EEEETTTCCEEECC
T ss_pred EEEECCCCeEEECC
Confidence 89999999999984
No 14
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.02 E-value=3.4e-11 Score=77.45 Aligned_cols=42 Identities=29% Similarity=0.373 Sum_probs=38.6
Q ss_pred CCCCcHHHHHHHHccCCccceeeeeecccccccccCChhHHH
Q 017755 1 MSSLPLDLISDILSRLPVKPLLRFRCVSKCFCGLIDSQDFVK 42 (366)
Q Consensus 1 ~~~LP~Dll~~Il~rLP~~~l~r~~~VcK~W~~li~~~~F~~ 42 (366)
++.||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 568999999999999999999999999999999999988743
No 15
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.00 E-value=5.8e-11 Score=103.58 Aligned_cols=48 Identities=27% Similarity=0.407 Sum_probs=45.4
Q ss_pred CCCCcHHHHHHHHccCCcccee-eeeecccccccccCChhHHHHHHHhh
Q 017755 1 MSSLPLDLISDILSRLPVKPLL-RFRCVSKCFCGLIDSQDFVKLHLNQA 48 (366)
Q Consensus 1 ~~~LP~Dll~~Il~rLP~~~l~-r~~~VcK~W~~li~~~~F~~~~~~~~ 48 (366)
|+.||+||+.+||+|||+++|+ ||++|||+|++++++|.|.+.+..+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 5689999999999999999999 99999999999999999999988765
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.94 E-value=7.3e-08 Score=87.79 Aligned_cols=154 Identities=11% Similarity=0.062 Sum_probs=93.6
Q ss_pred eEEEEEEcCCCcEEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEEC--CCceeEEE-CCCCCCCCCee
Q 017755 170 LEVIIYSLKADTWRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDL--KSEKFYEV-QQPHGMKGGFC 246 (366)
Q Consensus 170 ~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~--~~e~~~~i-~~P~~~~~~~~ 246 (366)
..+++|+..+++|+.+..+|...... ...+.++|++|.++...........+.+||+ .+.+|+.+ .+|..... ..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~-~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~-~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAG-AAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV-AG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBS-CEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC-BS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCccc-ccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc-cc
Confidence 58999999999999998776543321 2367889999999875322111246777876 89999987 44433211 23
Q ss_pred eEEEEECCEEEEEEecCC------------------CCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCC
Q 017755 247 SQVGVLRGCLWINSYYHD------------------EPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDG 308 (366)
Q Consensus 247 ~~l~~~~G~L~~v~~~~~------------------~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g 308 (366)
...+..+|+|+++..... ...-++|+++.. ..+|+++..++.... .+.. +.-++
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~-----~~~~-~~~~~ 317 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELSQGRA-----YGVS-LPWNN 317 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCB-----SSEE-EEETT
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC--CCceeeCCCCCCCcc-----ccee-EEeCC
Confidence 457888999999987421 112356676642 468998866544332 1222 22355
Q ss_pred CeEEEEEcC------CeEEEEECCCCcEEEE
Q 017755 309 DKALIYQHS------RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 309 ~~i~l~~~~------~~l~~ydl~t~~~~~v 333 (366)
.++++...+ ..+..+++++++|.+.
T Consensus 318 ~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 318 SLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred EEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 534443322 2488999999998776
No 17
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.92 E-value=6.7e-07 Score=83.72 Aligned_cols=233 Identities=11% Similarity=0.073 Sum_probs=117.8
Q ss_pred CCCCcHHHHHHHHccCCccceeeeeecccccccccCChhHHHHHHHhhhcCCCceEEEeeccCCCC-------eeEEec-
Q 017755 1 MSSLPLDLISDILSRLPVKPLLRFRCVSKCFCGLIDSQDFVKLHLNQAIETNSGLSLIVPTLTSDN-------KFFSLE- 72 (366)
Q Consensus 1 ~~~LP~Dll~~Il~rLP~~~l~r~~~VcK~W~~li~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~- 72 (366)
++.||+|++.+||+.|++++|.++.+|||+|+.++.++.+-+......... ..+..-........ ..|...
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wk~~~~~~~ 97 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGID-EPLHIKRRKVIKPGFIHSPWKSAYIRQH 97 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCC-SCCCCCC--CCSSCCCCCHHHHHHHHHH
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccc-cccccccceecCCCccCCcHHHHHhhhh
Confidence 468999999999999999999999999999999999998877665432111 00000000000000 000000
Q ss_pred -----C--CCCCCceeeccCCccCCCCceEEEecccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEe
Q 017755 73 -----L--DSVDNPVEIEYPFKKYNRGHTSVIGCCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFD 145 (366)
Q Consensus 73 -----~--~~~~~~~~~~~p~~~~~~~~~~~~~s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~ 145 (366)
. ........+ ......-...+...+.+++....++.+.|||..+++....-..... . ..
T Consensus 98 ~~~~~w~~~~~~~~~~l----~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~--------~--v~ 163 (445)
T 2ovr_B 98 RIDTNWRRGELKSPKVL----KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG--------G--VW 163 (445)
T ss_dssp HHHHHHHHSCCCCCEEE----ECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSS--------C--EE
T ss_pred hhhhcccCCCcceeEEe----cccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCC--------C--EE
Confidence 0 000000000 0001111234455556666666788999999998886532221111 1 22
Q ss_pred EEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEe-cCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEE
Q 017755 146 GFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRR-TREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILA 224 (366)
Q Consensus 146 ~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~-~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~ 224 (366)
.+.++ +++ ++.. .....+.+|+..++.-.. +..-... -..+..+|.....+..+ ..|..
T Consensus 164 ~~~~~---~~~-l~s~-----~~dg~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~~~~l~s~s~d------g~i~~ 223 (445)
T 2ovr_B 164 SSQMR---DNI-IISG-----STDRTLKVWNAETGECIHTLYGHTST-----VRCMHLHEKRVVSGSRD------ATLRV 223 (445)
T ss_dssp EEEEE---TTE-EEEE-----ETTSCEEEEETTTTEEEEEECCCSSC-----EEEEEEETTEEEEEETT------SEEEE
T ss_pred EEEec---CCE-EEEE-----eCCCeEEEEECCcCcEEEEECCCCCc-----EEEEEecCCEEEEEeCC------CEEEE
Confidence 33444 222 2221 123457778877663221 1110000 11344456554444444 37999
Q ss_pred EECCCceeE-EECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEee
Q 017755 225 FDLKSEKFY-EVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKE 275 (366)
Q Consensus 225 fD~~~e~~~-~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~ 275 (366)
+|+.+.+.. .+...... ...+ ..+|...++..... .+.+|-++.
T Consensus 224 wd~~~~~~~~~~~~~~~~----v~~~-~~~~~~l~~~~~dg--~i~iwd~~~ 268 (445)
T 2ovr_B 224 WDIETGQCLHVLMGHVAA----VRCV-QYDGRRVVSGAYDF--MVKVWDPET 268 (445)
T ss_dssp EESSSCCEEEEEECCSSC----EEEE-EECSSCEEEEETTS--CEEEEEGGG
T ss_pred EECCCCcEEEEEcCCccc----EEEE-EECCCEEEEEcCCC--EEEEEECCC
Confidence 999876543 23322111 1222 23666555555444 688887654
No 18
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.87 E-value=8.2e-07 Score=83.45 Aligned_cols=44 Identities=23% Similarity=0.331 Sum_probs=39.0
Q ss_pred CCCcHHHHHHHHccCCccceeeeeecccccccccCC-hhHHHHHH
Q 017755 2 SSLPLDLISDILSRLPVKPLLRFRCVSKCFCGLIDS-QDFVKLHL 45 (366)
Q Consensus 2 ~~LP~Dll~~Il~rLP~~~l~r~~~VcK~W~~li~~-~~F~~~~~ 45 (366)
+.||+|++.+||+.||+++|+++..|||+|+.++.+ +..-+.+.
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~ 60 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLL 60 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 469999999999999999999999999999999998 76555543
No 19
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.86 E-value=1.1e-07 Score=94.57 Aligned_cols=199 Identities=11% Similarity=0.045 Sum_probs=120.5
Q ss_pred ceEEEEcCCCcceEecC-CC-----CCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecc--cceeEEEEEEcCCCcE
Q 017755 111 LGMSVFNPTTKKFKLFP-QF-----WSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYK--VDYLEVIIYSLKADTW 182 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP-~~-----~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~--~~~~~~~vyss~~~~W 182 (366)
..+.++||.+++|..++ +. +... . ......+.. ++ +++.+.-... .....+++|+..+++|
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R-~-----~hs~~~~~~----~~-~lyv~GG~~~~~~~~~dv~~yd~~t~~W 480 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVAR-M-----CHTFTTISR----NN-QLLLIGGRKAPHQGLSDNWIFDMKTREW 480 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCC-B-----SCEEEEETT----TT-EEEEECCBSSTTCBCCCCEEEETTTTEE
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccc-c-----ceEEEEEcc----CC-EEEEEcCCCCCCCccccEEEEeCCCCcE
Confidence 46899999999999988 52 2221 1 112222210 11 3333332211 1235689999999999
Q ss_pred EecCCCCceeecCCCCceEE-CCeEEEEEeeCCCCCCcceEEEEECCCceeEEEC----CCCCCCCCeeeEEEEEC---C
Q 017755 183 RRTREFPYYILDDRCNGVFI-AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQ----QPHGMKGGFCSQVGVLR---G 254 (366)
Q Consensus 183 ~~~~~~p~~~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~----~P~~~~~~~~~~l~~~~---G 254 (366)
+.+..+|...... .++.+ +|++|.+++..... .+.+||+.+++|+.+. +|.... ....++++ |
T Consensus 481 ~~~~~~p~~R~~h--~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~---~~~a~v~~~~~~ 551 (695)
T 2zwa_A 481 SMIKSLSHTRFRH--SACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSL---VSAGLEFDPVSK 551 (695)
T ss_dssp EECCCCSBCCBSC--EEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCC---BSCEEEEETTTT
T ss_pred EECCCCCCCcccc--eEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCccc---ceeEEEEeCCCC
Confidence 9998877654433 25564 99999999875432 7999999999999985 444432 22223334 8
Q ss_pred EEEEEEecCCC---CeEEEEEEeecCCCCC------eeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc---------
Q 017755 255 CLWINSYYHDE---PRCDIWVMKEYGSQQS------WSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH--------- 316 (366)
Q Consensus 255 ~L~~v~~~~~~---~~l~iW~l~~~~~~~~------W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~--------- 316 (366)
+|+++.+.... ..-++|.++-. ... |.++...+... ...+..++..+|. |++...
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~----R~~~~~~~~~~~~-iyv~GG~~~~~~~~~ 624 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYD--AENATEPITVIKKLQHPLFQ----RYGSQIKYITPRK-LLIVGGTSPSGLFDR 624 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGC----CBSCEEEEEETTE-EEEECCBCSSCCCCT
T ss_pred EEEEECCcCCCCCeeeCcEEEEEcc--CCccccceEEEEcCCCCCCC----cccceEEEeCCCE-EEEECCccCCCCCCC
Confidence 99999886321 12367777653 244 87776532111 1122233333355 555432
Q ss_pred CCeEEEEECCCCcEEEEEEe
Q 017755 317 SRCLHWYNLKDHKQDVIEIR 336 (366)
Q Consensus 317 ~~~l~~ydl~t~~~~~v~~~ 336 (366)
...+..||+++++|+.+.+.
T Consensus 625 ~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 625 TNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp TTSEEEEETTTTEEEECCCC
T ss_pred CCeEEEEECCCCeEEEeecc
Confidence 12499999999999976543
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.73 E-value=1e-07 Score=89.08 Aligned_cols=281 Identities=10% Similarity=0.045 Sum_probs=138.7
Q ss_pred CCCcHH----HHHHHHccCCccceeeeeecccccccccCChhHHHHHHHhhhcC----------CCc-eEEEeeccC---
Q 017755 2 SSLPLD----LISDILSRLPVKPLLRFRCVSKCFCGLIDSQDFVKLHLNQAIET----------NSG-LSLIVPTLT--- 63 (366)
Q Consensus 2 ~~LP~D----ll~~Il~rLP~~~l~r~~~VcK~W~~li~~~~F~~~~~~~~~~~----------~~~-~~l~~~~~~--- 63 (366)
+.||+| |+..||+.|++++|.++.+|||+|+.++.++..-+....+.... ..+ ..++.+...
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 91 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGN 91 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC--------
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCCCC
Confidence 469999 99999999999999999999999999999887666543322100 000 000000000
Q ss_pred -CCCe----eEE--------ec--CCCCCC-ceeeccCCccCCCCceEEEecccceEEeeecCceEEEEcCCCcceEecC
Q 017755 64 -SDNK----FFS--------LE--LDSVDN-PVEIEYPFKKYNRGHTSVIGCCHGLLAMFNRRLGMSVFNPTTKKFKLFP 127 (366)
Q Consensus 64 -~~~~----~~~--------~~--~~~~~~-~~~~~~p~~~~~~~~~~~~~s~nGLl~~~~~~~~~~V~NP~t~~~~~lP 127 (366)
.... ++. +. ...... ...+.... . .......++..+.++.....++.+.+||..+++....-
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~-~-~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~ 169 (435)
T 1p22_A 92 APPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS-E-TSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRIL 169 (435)
T ss_dssp -CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCC-S-SCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEE
T ss_pred CCchhhHHhhhhhhhcchhHHHhhhccCCccceEEeccc-C-CCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEE
Confidence 0000 000 00 000000 00000000 0 11124445555555555556788999999988865432
Q ss_pred CCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEe-cCCCCceeecCCCCceEECCeE
Q 017755 128 QFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRR-TREFPYYILDDRCNGVFIAGAL 206 (366)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~-~~~~p~~~~~~~~~~v~~~G~l 206 (366)
.... .....+.+| +++ ++. .. ..-.+.+|+..++.-.. +..-.. ....+..++..
T Consensus 170 ~~h~----------~~v~~l~~~---~~~-l~s-g~----~dg~i~vwd~~~~~~~~~~~~h~~-----~v~~l~~~~~~ 225 (435)
T 1p22_A 170 TGHT----------GSVLCLQYD---ERV-IIT-GS----SDSTVRVWDVNTGEMLNTLIHHCE-----AVLHLRFNNGM 225 (435)
T ss_dssp CCCS----------SCEEEEECC---SSE-EEE-EE----TTSCEEEEESSSCCEEEEECCCCS-----CEEEEECCTTE
T ss_pred cCCC----------CcEEEEEEC---CCE-EEE-Ec----CCCeEEEEECCCCcEEEEEcCCCC-----cEEEEEEcCCE
Confidence 2111 112234443 222 222 21 23457778887664321 111000 01234445555
Q ss_pred EEEEeeCCCCCCcceEEEEECCCceeEE-E-CCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeE
Q 017755 207 HWLAARGSVRTGQNMILAFDLKSEKFYE-V-QQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSK 284 (366)
Q Consensus 207 yw~~~~~~~~~~~~~i~~fD~~~e~~~~-i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~ 284 (366)
...+..+ ..|..+|+.+.+-.. . .+..+. .....+. .+|...++..... .+.+|-++.. ..
T Consensus 226 l~s~s~d------g~i~vwd~~~~~~~~~~~~~~~~~--~~v~~~~-~~~~~l~s~~~dg--~i~vwd~~~~------~~ 288 (435)
T 1p22_A 226 MVTCSKD------RSIAVWDMASPTDITLRRVLVGHR--AAVNVVD-FDDKYIVSASGDR--TIKVWNTSTC------EF 288 (435)
T ss_dssp EEEEETT------SCEEEEECSSSSCCEEEEEECCCS--SCEEEEE-EETTEEEEEETTS--EEEEEETTTC------CE
T ss_pred EEEeeCC------CcEEEEeCCCCCCceeeeEecCCC--CcEEEEE-eCCCEEEEEeCCC--eEEEEECCcC------cE
Confidence 4444444 378899998654321 1 111111 1122222 2555555554444 7999987642 22
Q ss_pred EEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEE
Q 017755 285 LCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 285 ~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
+..+.... ..+.++..+++.++....++.+.+||+++++..
T Consensus 289 ~~~~~~~~------~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 289 VRTLNGHK------RGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp EEEEECCS------SCEEEEEEETTEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEcCCC------CcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEE
Confidence 33333211 111222225675666667777999999988753
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.49 E-value=1.4e-06 Score=86.07 Aligned_cols=108 Identities=11% Similarity=0.040 Sum_probs=70.9
Q ss_pred eEEEEcCCCcceEecCCCCCCCccCCCCCCee-EeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCCc
Q 017755 112 GMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFH-FDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFPY 190 (366)
Q Consensus 112 ~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~-~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~ 190 (366)
.+.++||.|++|..++.++... . ..+ ...+..+ + +++.+.-. ....+++|+..+++|..+..+|.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~-~-----~~~~~~~~~~~---g--~lyv~GG~---~~~~v~~yd~~t~~W~~~~~~~~ 285 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKH-D-----MFCPGISMDGN---G--QIVVTGGN---DAKKTSLYDSSSDSWIPGPDMQV 285 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSC-C-----CSSCEEEECTT---S--CEEEECSS---STTCEEEEEGGGTEEEECCCCSS
T ss_pred EEEEEeCCCCcEEeCcccCCCC-C-----CccccccCCCC---C--CEEEeCCC---CCCceEEecCcCCceeECCCCCc
Confidence 5789999999999987765432 1 111 1111111 1 34433221 11268999999999999987776
Q ss_pred eeecCCCCceEE-CCeEEEEEeeCCCCCCcceEEEEECCCceeEEE
Q 017755 191 YILDDRCNGVFI-AGALHWLAARGSVRTGQNMILAFDLKSEKFYEV 235 (366)
Q Consensus 191 ~~~~~~~~~v~~-~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i 235 (366)
..... ..+.+ +|++|.++....+......+..||+.+++|+.+
T Consensus 286 ~R~~~--s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 286 ARGYQ--SSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CCSSC--EEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred ccccc--ceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 54332 25677 999999998432222235799999999999986
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.39 E-value=3.7e-06 Score=83.50 Aligned_cols=157 Identities=13% Similarity=0.123 Sum_probs=102.7
Q ss_pred ceeEEEEEEcCCCcEEecC-CC-----CceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCC
Q 017755 168 DYLEVIIYSLKADTWRRTR-EF-----PYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQP 238 (366)
Q Consensus 168 ~~~~~~vyss~~~~W~~~~-~~-----p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P 238 (366)
....+.+|+..+++|+.+. ++ |..... ...+.+ +|++|.+++..........+..||+.+.+|+.+ ++|
T Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~--hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p 487 (695)
T 2zwa_A 410 RVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC--HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLS 487 (695)
T ss_dssp BCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS--CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCS
T ss_pred CcCcEEEEECCCCeEEEeccCCCCCCCCccccc--eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCC
Confidence 3456899999999999987 53 333322 236788 999999998754321234699999999999998 566
Q ss_pred CCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc-eeEEEEEEeCCCeEEEEEc
Q 017755 239 HGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY-YTEAFAFSKDGDKALIYQH 316 (366)
Q Consensus 239 ~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~-~~~~~~~~~~g~~i~l~~~ 316 (366)
... .....+.+ +|+|+++.+..... ++|..+.. ..+|+.+..... ++... ....+.+..+.+.|++...
T Consensus 488 ~~R---~~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~--t~~W~~~~~~g~--~p~~r~~~~a~v~~~~~~~iyv~GG 558 (695)
T 2zwa_A 488 HTR---FRHSACSLPDGNVLILGGVTEGP--AMLLYNVT--EEIFKDVTPKDE--FFQNSLVSAGLEFDPVSKQGIILGG 558 (695)
T ss_dssp BCC---BSCEEEECTTSCEEEECCBCSSC--SEEEEETT--TTEEEECCCSSG--GGGSCCBSCEEEEETTTTEEEEECC
T ss_pred CCc---ccceEEEEcCCEEEEECCCCCCC--CEEEEECC--CCceEEccCCCC--CCCcccceeEEEEeCCCCEEEEECC
Confidence 544 23455554 99999998876553 88888753 467987654211 21111 2222333333244666542
Q ss_pred C--------CeEEEEECCCCc------EEEEEE
Q 017755 317 S--------RCLHWYNLKDHK------QDVIEI 335 (366)
Q Consensus 317 ~--------~~l~~ydl~t~~------~~~v~~ 335 (366)
. ..+..||+++++ |+.+.-
T Consensus 559 ~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 559 GFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp BCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred cCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 1 349999999999 777743
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.14 E-value=1.1e-05 Score=79.63 Aligned_cols=197 Identities=9% Similarity=-0.017 Sum_probs=112.2
Q ss_pred EEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecc-------cceeEEEEEEcCCCcEEec
Q 017755 113 MSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYK-------VDYLEVIIYSLKADTWRRT 185 (366)
Q Consensus 113 ~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~-------~~~~~~~vyss~~~~W~~~ 185 (366)
+..+||.+++|..+++++... . ...+ .+..+ |++.+..... .....+++|+..+++|+.+
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~-------~--~~av--~~~~g--~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~ 234 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVP-------A--AAAI--EPTSG--RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR 234 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCC-------S--EEEE--ETTTT--EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC
T ss_pred cccCCCCCCeeeeeccCCCCc-------e--eEEE--EecCC--EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeC
Confidence 344689999999877765432 1 1111 12112 4444432211 1234789999999999998
Q ss_pred CCCCceeecCCCC-ceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEE-CCEEEEEEec
Q 017755 186 REFPYYILDDRCN-GVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVL-RGCLWINSYY 262 (366)
Q Consensus 186 ~~~p~~~~~~~~~-~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~-~G~L~~v~~~ 262 (366)
..+|......... .+..+|++|.++.... ..+..||+.+++|+.+ ++|... .....+.+ +|+++++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~W~~~~~~~~~R---~~~s~~~~~dg~iyv~GG~ 306 (656)
T 1k3i_A 235 TVTVTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGPDMQVAR---GYQSSATMSDGRVFTIGGS 306 (656)
T ss_dssp EEEECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGTEEEECCCCSSCC---SSCEEEECTTSCEEEECCC
T ss_pred cccCCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCCceeECCCCCccc---cccceEEecCCeEEEEeCc
Confidence 7655433222211 2346899999998653 2699999999999987 555443 34466777 8999999883
Q ss_pred -CCC-CeEEEEEEeecCCCCCeeEEEEecCCCCCCcc-------eeEEEEEE-eCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 263 -HDE-PRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY-------YTEAFAFS-KDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 263 -~~~-~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~-------~~~~~~~~-~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
... ..-++|+.+. ...+|+.+.......++... ...+..+. .+|. ++.......+..||+++++|..
T Consensus 307 ~~~~~~~~~~e~yd~--~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~-~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 307 WSGGVFEKNGEVYSP--SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGS-VFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp CCSSSCCCCEEEEET--TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGC-EEECCSSSEEEEEECSTTCEEE
T ss_pred ccCCcccccceEeCC--CCCcceeCCCccccccccccccceeecCCceEEEECCCCc-EEEecCccceeeeecCCcceee
Confidence 211 0123444443 23679876322111111100 01111221 2343 4433334469999999999765
Q ss_pred E
Q 017755 333 I 333 (366)
Q Consensus 333 v 333 (366)
.
T Consensus 384 ~ 384 (656)
T 1k3i_A 384 S 384 (656)
T ss_dssp E
T ss_pred c
Confidence 4
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.78 E-value=2.1e-06 Score=74.07 Aligned_cols=49 Identities=18% Similarity=0.250 Sum_probs=44.7
Q ss_pred CCCcHHHHHHHHccCCccceeeeeecccccccccCChhHHHHHHHhhhc
Q 017755 2 SSLPLDLISDILSRLPVKPLLRFRCVSKCFCGLIDSQDFVKLHLNQAIE 50 (366)
Q Consensus 2 ~~LP~Dll~~Il~rLP~~~l~r~~~VcK~W~~li~~~~F~~~~~~~~~~ 50 (366)
+.||+|++..||+.|++++|+++.+|||.|+.+.+|+.--+.+..+...
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~ 54 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP 54 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGG
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCC
Confidence 5799999999999999999999999999999999999988887776543
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.22 E-value=3.9e-05 Score=68.84 Aligned_cols=39 Identities=31% Similarity=0.394 Sum_probs=36.0
Q ss_pred CCCCcHHHHHHHHccCCccceeeeeecccccccccCChh
Q 017755 1 MSSLPLDLISDILSRLPVKPLLRFRCVSKCFCGLIDSQD 39 (366)
Q Consensus 1 ~~~LP~Dll~~Il~rLP~~~l~r~~~VcK~W~~li~~~~ 39 (366)
++.||+|++.+||.+|+.+++.+++.|||+|+.+..+|.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 468999999999999999999999999999999987665
No 26
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.84 E-value=0.25 Score=44.28 Aligned_cols=195 Identities=11% Similarity=0.097 Sum_probs=104.3
Q ss_pred eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcE
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTW 182 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W 182 (366)
++.....++.+.|||..+++....-..... ......+.+.|..+++-+.+ .....+.+++..+...
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h--------~~~v~~~~~~~~~~~~l~s~------~~d~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGP--------GDAITGMKFNQFNTNQLFVS------SIRGATTLRDFSGSVI 153 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCST--------TCBEEEEEEETTEEEEEEEE------ETTTEEEEEETTSCEE
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCc--------CCceeEEEeCCCCCCEEEEE------eCCCEEEEEECCCCce
Confidence 444444567889999998876554332111 11233455555322222222 1234577888877665
Q ss_pred EecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCE-EEEEE
Q 017755 183 RRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGC-LWINS 260 (366)
Q Consensus 183 ~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~-L~~v~ 260 (366)
+..............-...-+|.....+..+ ..|..+|+..+....+..... ....+... +|+ +.+..
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h~~----~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLHKA----KVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECSSS----CEEEEEECSSCTTEEEEE
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccCCC----cEEEEEECCCCCCEEEEE
Confidence 5543221000000000122245544444443 379999997666555543222 12233333 354 55555
Q ss_pred ecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEe-CCCeEEEEEcCCeEEEEECCCCcE
Q 017755 261 YYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSK-DGDKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 261 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~-~g~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
.... .+.+|-+........ .+..+.... ...-+.+.+ +|..++....++.+.+||+++++.
T Consensus 224 ~~d~--~i~iwd~~~~~~~~~--~~~~~~~~~-----~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 224 SVDA--TVKLWDLRNIKDKNS--YIAEMPHEK-----PVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp ETTS--EEEEEEGGGCCSTTC--EEEEEECSS-----CEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred eCCC--EEEEEeCCCCCcccc--eEEEecCCC-----ceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 5444 799999986322222 233333222 355678888 898777777777899999998765
No 27
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.60 E-value=0.00022 Score=69.18 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=29.3
Q ss_pred CCCCcHHHHHHHHccCC-ccceeeeeecccccccc
Q 017755 1 MSSLPLDLISDILSRLP-VKPLLRFRCVSKCFCGL 34 (366)
Q Consensus 1 ~~~LP~Dll~~Il~rLP-~~~l~r~~~VcK~W~~l 34 (366)
++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 46899999999999999 99999999999999987
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.16 Score=45.03 Aligned_cols=142 Identities=11% Similarity=0.123 Sum_probs=77.4
Q ss_pred eEEEEEEcCCCcEEecCCCCceeecCCCCceEEC----CeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCC
Q 017755 170 LEVIIYSLKADTWRRTREFPYYILDDRCNGVFIA----GALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGG 244 (366)
Q Consensus 170 ~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~~----G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~ 244 (366)
-.+.+|+..++.|..+........ ....+.+. |.+...+..+ ..|..+|+.+..- ..+.+..+..
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~-- 148 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSA--SVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAI-- 148 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSS--CEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEECCTT--
T ss_pred CEEEEEEcCCCceeEeeeecCCCc--ceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecCCCC--
Confidence 457888888888766543221100 00122222 4444444443 3788888876522 2121111111
Q ss_pred eeeEEEEE--------------CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeC---
Q 017755 245 FCSQVGVL--------------RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKD--- 307 (366)
Q Consensus 245 ~~~~l~~~--------------~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~--- 307 (366)
....+... +|.+.+...... .+.+|-+... ...|.....+....- ...-+.+.++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~--~~~~~~~~~~~~h~~----~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADN--LVKIWKYNSD--AQTYVLESTLEGHSD----WVRDVAWSPTVLL 220 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTS--CEEEEEEETT--TTEEEEEEEECCCSS----CEEEEEECCCCSS
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCC--eEEEEEecCC--CcceeeEEEEecccC----cEeEEEECCCCCC
Confidence 11122222 466666655444 7999999853 345666665543221 3555778888
Q ss_pred CCeEEEEEcCCeEEEEECCCCc
Q 017755 308 GDKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 308 g~~i~l~~~~~~l~~ydl~t~~ 329 (366)
+..++....++.+.+||++++.
T Consensus 221 ~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 221 RSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp SEEEEEEETTSCEEEEEESSTT
T ss_pred CCeEEEEeCCCEEEEEeCCCCC
Confidence 6756666667779999998874
No 29
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.12 E-value=0.28 Score=41.41 Aligned_cols=115 Identities=13% Similarity=0.214 Sum_probs=77.8
Q ss_pred ce-EECCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeec
Q 017755 199 GV-FIAGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEY 276 (366)
Q Consensus 199 ~v-~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~ 276 (366)
++ +.+|.+|--+.... ...|..+|+++.+- ..+++|... +-..+...+++|+++..... .+|+.+-
T Consensus 25 GL~~~~~~LyestG~~g----~S~v~~vD~~tgkv~~~~~l~~~~---fgeGi~~~~~~ly~ltw~~~----~v~v~D~- 92 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETG----RSSVRKVDLETGRILQRAEVPPPY---FGAGIVAWRDRLIQLTWRNH----EGFVYDL- 92 (243)
T ss_dssp EEEEETTEEEEEECCTT----SCEEEEEETTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESSSS----EEEEEET-
T ss_pred cEEEECCEEEEECCCCC----CceEEEEECCCCCEEEEEeCCCCc---ceeEEEEeCCEEEEEEeeCC----EEEEEEC-
Confidence 44 55677777665532 24899999998876 556888765 34456777899999865433 5666664
Q ss_pred CCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcE-EEEEE
Q 017755 277 GSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ-DVIEI 335 (366)
Q Consensus 277 ~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~-~~v~~ 335 (366)
.+-..+.+|....- ..++..+|+.+++...+..+..+|++|.+. +.|.+
T Consensus 93 ---~tl~~~~ti~~~~~-------Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 93 ---ATLTPRARFRYPGE-------GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp ---TTTEEEEEEECSSC-------CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ---CcCcEEEEEeCCCC-------ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 33556777776431 245566788788876666799999999775 55554
No 30
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.04 E-value=0.15 Score=43.51 Aligned_cols=113 Identities=11% Similarity=0.135 Sum_probs=75.2
Q ss_pred EECCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCC
Q 017755 201 FIAGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQ 279 (366)
Q Consensus 201 ~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~ 279 (366)
+.+|.||--+.... ...|..+|+++.+. ..+++|... +-..+...+++|+++..... .+|+.+-
T Consensus 50 ~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~---FgeGit~~g~~ly~ltw~~~----~v~v~D~---- 114 (262)
T 3nol_A 50 YRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRY---FGEGISDWKDKIVGLTWKNG----LGFVWNI---- 114 (262)
T ss_dssp EETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTC---CEEEEEEETTEEEEEESSSS----EEEEEET----
T ss_pred EECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCcc---ceeEEEEeCCEEEEEEeeCC----EEEEEEC----
Confidence 45788888776642 14899999998876 556777654 33457777899999866443 5666664
Q ss_pred CCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcE-EEEEE
Q 017755 280 QSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ-DVIEI 335 (366)
Q Consensus 280 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~-~~v~~ 335 (366)
.+-..+.+|.... . ..++..+|+.+++......+..+|++|.+. ..|.+
T Consensus 115 ~t~~~~~ti~~~~-e------G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 115 RNLRQVRSFNYDG-E------GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp TTCCEEEEEECSS-C------CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred ccCcEEEEEECCC-C------ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 2344566776643 1 145556788677765555799999998764 55554
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.93 E-value=0.73 Score=39.83 Aligned_cols=197 Identities=12% Similarity=0.071 Sum_probs=100.8
Q ss_pred cccceEEeeecCceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEc
Q 017755 99 CCHGLLAMFNRRLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSL 177 (366)
Q Consensus 99 s~nGLl~~~~~~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss 177 (366)
+.+|-+++....+.+.+||..+++... +....... + ......+.+.|. +++-+++ . ..-.+.+|+.
T Consensus 60 ~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~-----~~~v~~~~~~~~-~~~l~~~--~----~d~~i~~~d~ 126 (337)
T 1gxr_A 60 SNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLN-R-----DNYIRSCKLLPD-GCTLIVG--G----EASTLSIWDL 126 (337)
T ss_dssp CSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSC-T-----TSBEEEEEECTT-SSEEEEE--E----SSSEEEEEEC
T ss_pred ecCCcEEEEcCCCeEEEEECCCCCceeeeecccccC-C-----CCcEEEEEEcCC-CCEEEEE--c----CCCcEEEEEC
Confidence 345544433336788999987765321 11111000 0 112334566663 2222222 1 2346888888
Q ss_pred CCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEE-C
Q 017755 178 KADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVL-R 253 (366)
Q Consensus 178 ~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~-~ 253 (366)
.++..+....+.... .....+.+ +|.....+..+ ..|..+|+.+.+... +..... ....+... +
T Consensus 127 ~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~~~----~i~~~~~~~~ 194 (337)
T 1gxr_A 127 AAPTPRIKAELTSSA--PACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVRQFQGHTD----GASCIDISND 194 (337)
T ss_dssp CCC--EEEEEEECSS--SCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCSS----CEEEEEECTT
T ss_pred CCCCcceeeecccCC--CceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCceeeeeecccC----ceEEEEECCC
Confidence 887644332111000 00011211 45555555444 368999998876533 333221 12233333 4
Q ss_pred CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 254 GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 254 G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
|...++..... .+.+|-++.. ..+..+.... ...-+.+.++|+.++....++.+..||+++++...+
T Consensus 195 ~~~l~~~~~dg--~i~~~d~~~~------~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 195 GTKLWTGGLDN--TVRSWDLREG------RQLQQHDFTS-----QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp SSEEEEEETTS--EEEEEETTTT------EEEEEEECSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE
T ss_pred CCEEEEEecCC--cEEEEECCCC------ceEeeecCCC-----ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE
Confidence 65555555443 7999987641 2233333222 245577788998777777777799999999876544
No 32
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.86 E-value=0.00095 Score=64.66 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=31.0
Q ss_pred CCCcHHHHHHHHccC-Cccceeeeeecccccccc
Q 017755 2 SSLPLDLISDILSRL-PVKPLLRFRCVSKCFCGL 34 (366)
Q Consensus 2 ~~LP~Dll~~Il~rL-P~~~l~r~~~VcK~W~~l 34 (366)
+.||+|++.+||++| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 369999999999999 899999999999999886
No 33
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.79 E-value=0.99 Score=40.26 Aligned_cols=190 Identities=11% Similarity=0.013 Sum_probs=100.9
Q ss_pred cceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCC
Q 017755 101 HGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKA 179 (366)
Q Consensus 101 nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~ 179 (366)
+..+.+.. ....+.+||+.+++....-.... . ...+.+.|.. ++-++. . ...-.+.+|+..+
T Consensus 85 g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~---------~--~~~~~~s~dg-~~l~~~--~---~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 85 GKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK---------S--PLGLALSPDG-KKLYVT--N---NGDKTVSVINTVT 147 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEEEEEECSS---------S--EEEEEECTTS-SEEEEE--E---TTTTEEEEEETTT
T ss_pred CCEEEEEECCCCEEEEEECCCCeEEEEEeCCC---------C--cceEEECCCC-CEEEEE--e---CCCCEEEEEECCC
Confidence 33344443 45789999999988754322211 1 2345666543 222122 1 2344688888887
Q ss_pred CcEEecCCCCceeecCCCCceE--ECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEE-CCE
Q 017755 180 DTWRRTREFPYYILDDRCNGVF--IAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVL-RGC 255 (366)
Q Consensus 180 ~~W~~~~~~p~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~-~G~ 255 (366)
++....-...... ..+. -+|...++..... ..|..+|+.+.+.... .... ....+... +|+
T Consensus 148 ~~~~~~~~~~~~~-----~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~g~ 212 (391)
T 1l0q_A 148 KAVINTVSVGRSP-----KGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVKVEA-----APSGIAVNPEGT 212 (391)
T ss_dssp TEEEEEEECCSSE-----EEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECSS-----EEEEEEECTTSS
T ss_pred CcEEEEEecCCCc-----ceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEecCC-----CccceEECCCCC
Confidence 7554322111111 1222 2455444443332 3799999988765433 3211 12223332 354
Q ss_pred -EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEE-cCCeEEEEECCCCcEEEE
Q 017755 256 -LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQ-HSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 256 -L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~ydl~t~~~~~v 333 (366)
|++.........+.+|-++. ...+..+.... ...-+.+.++|+.+++.. .+..+.+||+++++....
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~------~~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGT------NKITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTT------TEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEEecCcCCCcEEEEECCC------CeEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEE
Confidence 44444321233788887763 12344444322 234467788998777764 456799999999886544
No 34
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.70 E-value=1.1 Score=40.03 Aligned_cols=188 Identities=11% Similarity=0.074 Sum_probs=99.5
Q ss_pred cccc-eEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEE
Q 017755 99 CCHG-LLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYS 176 (366)
Q Consensus 99 s~nG-Ll~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vys 176 (366)
+.+| .+++.. ..+.+.+||+.+++....-.... ....+.+.|..+ +-++. . .....+.+|+
T Consensus 40 s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-----------~v~~~~~spdg~-~l~~~--~---~~~~~v~v~d 102 (391)
T 1l0q_A 40 SPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-----------SPQGVAVSPDGK-QVYVT--N---MASSTLSVID 102 (391)
T ss_dssp CTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-----------SEEEEEECTTSS-EEEEE--E---TTTTEEEEEE
T ss_pred CCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-----------CccceEECCCCC-EEEEE--E---CCCCEEEEEE
Confidence 4444 343333 56789999999988654322211 123456666432 22222 1 1234688888
Q ss_pred cCCCcEEecCCCCceeecCCCCceE--ECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEE-
Q 017755 177 LKADTWRRTREFPYYILDDRCNGVF--IAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVL- 252 (366)
Q Consensus 177 s~~~~W~~~~~~p~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~- 252 (366)
..++.-.......... .++. -+|...++..... ..|..+|+.+.+.... ..... ...+...
T Consensus 103 ~~~~~~~~~~~~~~~~-----~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~ 167 (391)
T 1l0q_A 103 TTSNTVAGTVKTGKSP-----LGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVGRS-----PKGIAVTP 167 (391)
T ss_dssp TTTTEEEEEEECSSSE-----EEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECCSS-----EEEEEECT
T ss_pred CCCCeEEEEEeCCCCc-----ceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecCCC-----cceEEECC
Confidence 8877543321111111 1222 2565443343322 4899999988776433 33211 1222222
Q ss_pred CCE-EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEE---cCCeEEEEECCCC
Q 017755 253 RGC-LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQ---HSRCLHWYNLKDH 328 (366)
Q Consensus 253 ~G~-L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~---~~~~l~~ydl~t~ 328 (366)
+|+ |++...... .+.+|-+.. ...+..+.... ...-+++.++|+.++... .+..+.+||++++
T Consensus 168 dg~~l~~~~~~~~--~v~~~d~~~------~~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 168 DGTKVYVANFDSM--SISVIDTVT------NSVIDTVKVEA-----APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp TSSEEEEEETTTT--EEEEEETTT------TEEEEEEECSS-----EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred CCCEEEEEeCCCC--EEEEEECCC------CeEEEEEecCC-----CccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 354 444433333 788887653 22333333322 244567888998777776 4567999999988
Q ss_pred cEE
Q 017755 329 KQD 331 (366)
Q Consensus 329 ~~~ 331 (366)
+..
T Consensus 235 ~~~ 237 (391)
T 1l0q_A 235 KIT 237 (391)
T ss_dssp EEE
T ss_pred eEE
Confidence 653
No 35
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.43 E-value=1.3 Score=39.03 Aligned_cols=196 Identities=11% Similarity=0.154 Sum_probs=95.5
Q ss_pred EEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEE
Q 017755 104 LAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWR 183 (366)
Q Consensus 104 l~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~ 183 (366)
++.....+.+.+||..++++..+-..... ......+.+.|. +++-+.+ . ..-.+.+|+..++.+.
T Consensus 23 l~~~~~d~~v~i~~~~~~~~~~~~~~~~h--------~~~v~~~~~~~~-~~~l~~~--~----~dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGNKWVQVHELKEH--------NGQVTGVDWAPD-SNRIVTC--G----TDRNAYVWTLKGRTWK 87 (372)
T ss_dssp EEEECSSSEEEEEEEETTEEEEEEEEECC--------SSCEEEEEEETT-TTEEEEE--E----TTSCEEEEEEETTEEE
T ss_pred EEEEeCCCEEEEEeCCCCcEEeeeeecCC--------CCcccEEEEeCC-CCEEEEE--c----CCCeEEEEECCCCeee
Confidence 33333567788999888853222111111 112334556663 3332222 1 2335778888777765
Q ss_pred ecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCce----eEEECCCCCCCCCeeeEEEEE-CCEE
Q 017755 184 RTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEK----FYEVQQPHGMKGGFCSQVGVL-RGCL 256 (366)
Q Consensus 184 ~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~----~~~i~~P~~~~~~~~~~l~~~-~G~L 256 (366)
......... .....+.+ +|.....+..+ ..|..+|+.+.+ ...+..+... ....+... +|.+
T Consensus 88 ~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 88 PTLVILRIN--RAARCVRWAPNEKKFAVGSGS------RVISICYFEQENDWWVCKHIKKPIRS---TVLSLDWHPNSVL 156 (372)
T ss_dssp EEEECCCCS--SCEEEEEECTTSSEEEEEETT------SSEEEEEEETTTTEEEEEEECTTCCS---CEEEEEECTTSSE
T ss_pred eeEEeecCC--CceeEEEECCCCCEEEEEeCC------CEEEEEEecCCCcceeeeeeecccCC---CeeEEEEcCCCCE
Confidence 432211000 00011222 45554444443 256666766543 2223332221 12233333 4555
Q ss_pred EEEEecCCCCeEEEEEEeecCC-----CCCe-------eEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEE
Q 017755 257 WINSYYHDEPRCDIWVMKEYGS-----QQSW-------SKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYN 324 (366)
Q Consensus 257 ~~v~~~~~~~~l~iW~l~~~~~-----~~~W-------~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 324 (366)
.+...... .+.+|.+..... ...| ..+..+....- ...-+.+.++|+.++....++.+.+||
T Consensus 157 l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~d~~i~i~d 230 (372)
T 1k8k_C 157 LAAGSCDF--KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG----WVHGVCFSANGSRVAWVSHDSTVCLAD 230 (372)
T ss_dssp EEEEETTS--CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS----CEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred EEEEcCCC--CEEEEEcccccccccccccccccccchhhheEecCCCCC----eEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 55554444 699998642110 1112 22233321110 355577788888777777777899999
Q ss_pred CCCCcEE
Q 017755 325 LKDHKQD 331 (366)
Q Consensus 325 l~t~~~~ 331 (366)
+++++..
T Consensus 231 ~~~~~~~ 237 (372)
T 1k8k_C 231 ADKKMAV 237 (372)
T ss_dssp GGGTTEE
T ss_pred CCCCcee
Confidence 9888753
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.26 E-value=0.49 Score=43.40 Aligned_cols=197 Identities=10% Similarity=0.085 Sum_probs=96.0
Q ss_pred eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcE
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTW 182 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W 182 (366)
+|.....++.+.|||..+++...+-.... + ......+.|.|..+++ ++.. ...-.+.+++.+++.-
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~g---H-----~~~V~~l~f~p~~~~~-l~s~-----s~D~~v~iwd~~~~~~ 199 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIG---A-----GGSITGLKFNPLNTNQ-FYAS-----SMEGTTRLQDFKGNIL 199 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCS---S-----SCCCCEEEECSSCTTE-EEEE-----CSSSCEEEEETTSCEE
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccC---C-----CCCEEEEEEeCCCCCE-EEEE-----eCCCEEEEeeccCCce
Confidence 55555567789999998887543222111 1 1122345666654443 2222 1223467777776655
Q ss_pred EecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCE-EEEEE
Q 017755 183 RRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGC-LWINS 260 (366)
Q Consensus 183 ~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~-L~~v~ 260 (366)
+..............-...-+|.+...+..+ ..|..+|+.++....+... ......+.-. +|. +.+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~~~~~~~h----~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 200 RVFASSDTINIWFCSLDVSASSRMVVTGDNV------GNVILLNMDGKELWNLRMH----KKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EEEECCSSCSCCCCCEEEETTTTEEEEECSS------SBEEEEESSSCBCCCSBCC----SSCEEEEEECTTCSSEEEEE
T ss_pred eEEeccCCCCccEEEEEECCCCCEEEEEeCC------CcEeeeccCcceeEEEecc----cceEEeeeecCCCceEEEEe
Confidence 4432111000000000122255555554443 3688889876544322221 1112223222 343 44444
Q ss_pred ecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 261 YYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 261 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
.... .+.||-+........... ..... ....-+++.++|..++-...++.+.+||++++....
T Consensus 270 s~d~--~v~iwd~~~~~~~~~~~~-----~~~h~--~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~ 332 (435)
T 4e54_B 270 SVDQ--TVKIWDLRQVRGKASFLY-----SLPHR--HPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL 332 (435)
T ss_dssp ETTS--BCCEEETTTCCSSSCCSB-----CCBCS--SCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred cCcc--eeeEEecccccccceEEE-----eeecc--ccccceeECCCCCeeEEEcCCCEEEEEECCCCccce
Confidence 3333 689998764321111100 00000 023445677889867666777779999999876543
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.13 E-value=1.8 Score=38.99 Aligned_cols=193 Identities=10% Similarity=0.035 Sum_probs=101.6
Q ss_pred EecccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEE
Q 017755 97 IGCCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYS 176 (366)
Q Consensus 97 ~~s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vys 176 (366)
++.+++.++.....+.+.+||..+++...+-..... .....+.+.|. +++-++ .. ..-.+.+|+
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~---------~~v~~v~~s~~-~~~l~~--~~----~dg~i~iwd 162 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADSGSVSALAETDES---------TYVASVKWSHD-GSFLSV--GL----GNGLVDIYD 162 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTT---------CCEEEEEECTT-SSEEEE--EE----TTSCEEEEE
T ss_pred EeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCC---------CCEEEEEECCC-CCEEEE--EC----CCCeEEEEE
Confidence 333334444444577899999999987665433211 12334566663 333222 22 233578888
Q ss_pred cCCCcEE-ecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCce--eEEECCCCCCCCCeeeEEEEE-
Q 017755 177 LKADTWR-RTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEK--FYEVQQPHGMKGGFCSQVGVL- 252 (366)
Q Consensus 177 s~~~~W~-~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~--~~~i~~P~~~~~~~~~~l~~~- 252 (366)
..++.-. .+..-.. ....+..+|.+...+..+ ..|..+|+.+.. ...+..... ....+...
T Consensus 163 ~~~~~~~~~~~~~~~-----~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~----~v~~~~~~~ 227 (401)
T 4aez_A 163 VESQTKLRTMAGHQA-----RVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQGHSS----EVCGLAWRS 227 (401)
T ss_dssp TTTCCEEEEECCCSS-----CEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSS----CEEEEEECT
T ss_pred CcCCeEEEEecCCCC-----ceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEcCCCC----CeeEEEEcC
Confidence 8765432 2211110 112345566655555544 379999998432 222222111 12223322
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc---CCeEEEEECCCCc
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH---SRCLHWYNLKDHK 329 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~---~~~l~~ydl~t~~ 329 (366)
+|.+.+...... .+.+|-+... ..+..+....- ...-+.+.++|..++.... ++.+.+||+++++
T Consensus 228 ~~~~l~s~~~d~--~v~iwd~~~~------~~~~~~~~~~~----~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 228 DGLQLASGGNDN--VVQIWDARSS------IPKFTKTNHNA----AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp TSSEEEEEETTS--CEEEEETTCS------SEEEEECCCSS----CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred CCCEEEEEeCCC--eEEEccCCCC------CccEEecCCcc----eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 466555555444 6999988752 12233321111 2445777787765666543 6679999999887
Q ss_pred EEE
Q 017755 330 QDV 332 (366)
Q Consensus 330 ~~~ 332 (366)
...
T Consensus 296 ~~~ 298 (401)
T 4aez_A 296 RVN 298 (401)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.11 E-value=1.5 Score=38.45 Aligned_cols=204 Identities=8% Similarity=0.044 Sum_probs=99.8
Q ss_pred ceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCC-CCeeEEEEEEecccceeEEEEEEcCCC
Q 017755 102 GLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDAST-DDYKLVRIIQSYKVDYLEVIIYSLKAD 180 (366)
Q Consensus 102 GLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~-~~ykVv~~~~~~~~~~~~~~vyss~~~ 180 (366)
.+++....++.+.+||..++++..+-..... ......+.+.|.. +.+-+++ ...-.+.+|+..++
T Consensus 70 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~l~~~------~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 70 TILASCSYDGKVLIWKEENGRWSQIAVHAVH--------SASVNSVQWAPHEYGPLLLVA------SSDGKVSVVEFKEN 135 (379)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCC--------SSCEEEEEECCGGGCSEEEEE------ETTSEEEEEECCTT
T ss_pred CEEEEeccCCEEEEEEcCCCceeEeeeecCC--------CcceEEEEeCCCCCCCEEEEe------cCCCcEEEEecCCC
Confidence 3444445677899999988864433222211 1123345666653 3332222 13346777887665
Q ss_pred cE-Eec--CCCC---ceeecCCC-------CceEECCeEEEEEeeCCCCCCcceEEEEECCCc--eeEEE-CCCCCCCCC
Q 017755 181 TW-RRT--REFP---YYILDDRC-------NGVFIAGALHWLAARGSVRTGQNMILAFDLKSE--KFYEV-QQPHGMKGG 244 (366)
Q Consensus 181 ~W-~~~--~~~p---~~~~~~~~-------~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e--~~~~i-~~P~~~~~~ 244 (366)
.- ... ..-. ........ ....-+|.+...+..+ ..|..+|+.+. .+..+ .+..+. .
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~h~--~ 207 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD------NLVKIWKYNSDAQTYVLESTLEGHS--D 207 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETT------SCEEEEEEETTTTEEEEEEEECCCS--S
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC------CeEEEEEecCCCcceeeEEEEeccc--C
Confidence 21 111 0000 01111000 0000145555555544 26788887643 33333 222221 1
Q ss_pred eeeEEEEE-C---CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeE
Q 017755 245 FCSQVGVL-R---GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCL 320 (366)
Q Consensus 245 ~~~~l~~~-~---G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l 320 (366)
.-..+.-. + |.+.+...... .+.+|.++... ..+.. ..+....... ...-+.+.++|..++....++.+
T Consensus 208 ~v~~~~~sp~~~~~~~l~s~~~dg--~i~iwd~~~~~--~~~~~-~~~~~~~~~~--~v~~~~~s~~g~~l~~~~~dg~i 280 (379)
T 3jrp_A 208 WVRDVAWSPTVLLRSYLASVSQDR--TCIIWTQDNEQ--GPWKK-TLLKEEKFPD--VLWRASWSLSGNVLALSGGDNKV 280 (379)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTS--CEEEEEESSTT--SCCEE-EESSSSCCSS--CEEEEEECSSSCCEEEEESSSSE
T ss_pred cEeEEEECCCCCCCCeEEEEeCCC--EEEEEeCCCCC--cccee-eeeccccCCC--cEEEEEEcCCCCEEEEecCCCcE
Confidence 12233322 2 56665555444 79999998632 22322 2222211111 35557888899977777777779
Q ss_pred EEEECCC-CcEEEEE
Q 017755 321 HWYNLKD-HKQDVIE 334 (366)
Q Consensus 321 ~~ydl~t-~~~~~v~ 334 (366)
.+||+++ ++++.+.
T Consensus 281 ~iw~~~~~~~~~~~~ 295 (379)
T 3jrp_A 281 TLWKENLEGKWEPAG 295 (379)
T ss_dssp EEEEEEETTEEEEEE
T ss_pred EEEeCCCCCcccccc
Confidence 9999984 4565553
No 39
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.96 E-value=0.58 Score=46.54 Aligned_cols=192 Identities=10% Similarity=0.077 Sum_probs=95.3
Q ss_pred eecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecC
Q 017755 107 FNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTR 186 (366)
Q Consensus 107 ~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~ 186 (366)
...++.+.|||..++....+...... ......+.+.+..+.-.++... ..-.+.+|+..++.|..+.
T Consensus 27 g~~dg~I~vwd~~~~~~~~~~~l~~h--------~~~V~~l~~s~~~~~~~l~s~s-----~Dg~I~vwd~~~~~~~~~~ 93 (753)
T 3jro_A 27 CSSDKTIKIFEVEGETHKLIDTLTGH--------EGPVWRVDWAHPKFGTILASCS-----YDGKVLIWKEENGRWSQIA 93 (753)
T ss_dssp EETTTEEEEEEEETTEEEEEEEECCC--------SSCEEEEEECCTTSCSEEEEEE-----TTSCEEEEEEETTEEEEEE
T ss_pred EECCCcEEEEecCCCCCccceeccCC--------cCceEEEEecCCCCCCEEEEEe-----CCCeEEEEECCCCcccccc
Confidence 33456677888764333322221111 1123345555543222333322 2345778888888776554
Q ss_pred CCCceeecCCCCceEEC----CeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCeeeEEEEE---------
Q 017755 187 EFPYYILDDRCNGVFIA----GALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFCSQVGVL--------- 252 (366)
Q Consensus 187 ~~p~~~~~~~~~~v~~~----G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~l~~~--------- 252 (366)
....... ....+.+. |.+...+..+ ..|..+|+.+..- ....+..+. .....+...
T Consensus 94 ~~~~h~~--~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~~~--~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 94 VHAVHSA--SVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHA--IGVNSASWAPATIEEDGE 163 (753)
T ss_dssp EECCCSS--CEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEECCS--SCEEEEEECCCC------
T ss_pred cccCCCC--CeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeecCC--CceEEEEecCcccccccc
Confidence 3221100 00122222 5555555443 3788888876521 111111111 011122211
Q ss_pred -----CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeC---CCeEEEEEcCCeEEEEE
Q 017755 253 -----RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKD---GDKALIYQHSRCLHWYN 324 (366)
Q Consensus 253 -----~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~---g~~i~l~~~~~~l~~yd 324 (366)
+|.+.++....+ .+.+|-+... ...+.....+....- ...-+.+.++ |..++....++.+.+||
T Consensus 164 ~~~~~d~~~l~sgs~dg--~I~iwd~~~~--~~~~~~~~~~~~h~~----~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 164 HNGTKESRKFVTGGADN--LVKIWKYNSD--AQTYVLESTLEGHSD----WVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp ---CGGGCCEEEEETTS--CEEEEEEETT--TTEEEEEEEECCCSS----CEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred cccCCCCCEEEEEECCC--eEEEEeccCC--cccceeeeeecCCCC----cEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 355555555444 6999999863 345665555543221 3555777888 77555556666799999
Q ss_pred CCCCc
Q 017755 325 LKDHK 329 (366)
Q Consensus 325 l~t~~ 329 (366)
+++++
T Consensus 236 ~~~~~ 240 (753)
T 3jro_A 236 QDNEQ 240 (753)
T ss_dssp ESSSS
T ss_pred CCCCC
Confidence 98864
No 40
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.91 E-value=0.68 Score=39.63 Aligned_cols=111 Identities=11% Similarity=0.126 Sum_probs=72.0
Q ss_pred CeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCe
Q 017755 204 GALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSW 282 (366)
Q Consensus 204 G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W 282 (366)
|.+|-...... ...|..+|+.+.+- ..+++|... +-..++..+++|++...... .+++.+- .+-
T Consensus 32 g~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~---fgeGi~~~g~~lyv~t~~~~----~v~viD~----~t~ 96 (266)
T 2iwa_A 32 DTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSY---FGEGLTLLNEKLYQVVWLKN----IGFIYDR----RTL 96 (266)
T ss_dssp TEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTC---CEEEEEEETTEEEEEETTCS----EEEEEET----TTT
T ss_pred CeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCc---ceEEEEEeCCEEEEEEecCC----EEEEEEC----CCC
Confidence 67777654321 14899999998775 445776543 22345666789998876433 4666663 245
Q ss_pred eEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcE-EEEEE
Q 017755 283 SKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ-DVIEI 335 (366)
Q Consensus 283 ~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~-~~v~~ 335 (366)
..+.+|... .+ ...++..+|+.+|+...+..+.+.|++|.+. +.|.+
T Consensus 97 ~v~~~i~~g-~~-----~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 97 SNIKNFTHQ-MK-----DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EEEEEEECC-SS-----SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cEEEEEECC-CC-----CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 567777765 11 1245667888788876556799999999774 55554
No 41
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.78 E-value=2 Score=37.96 Aligned_cols=201 Identities=9% Similarity=-0.004 Sum_probs=97.2
Q ss_pred cccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 99 CCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 99 s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
+.++.++....++.+.|||..+++........... + ......+.+.|.. ++ ++. .. ..-.+.+++..
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~-H-----~~~V~~v~~spdg-~~-l~s-gs----~d~~i~iwd~~ 157 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKYE-H-----DDIVSTVSVLSSG-TQ-AVS-GS----KDICIKVWDLA 157 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEEC-C-----SSCEEEEEECTTS-SE-EEE-EE----TTSCEEEEETT
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeeccccC-C-----CCCEEEEEECCCC-CE-EEE-Ee----CCCeEEEEECC
Confidence 34566666566788999999988754432221110 1 1123345566542 22 222 11 23346777777
Q ss_pred CCcEE-ecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE--
Q 017755 179 ADTWR-RTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-- 252 (366)
Q Consensus 179 ~~~W~-~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-- 252 (366)
++.=. .+..-.... ..+.+ +|.-+.+....+ ..|..+|+.+.+.. .+..+.... ....+...
T Consensus 158 ~~~~~~~~~~h~~~V-----~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~p~ 225 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQV-----TCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGY--LPTSLAWHPQ 225 (344)
T ss_dssp TTEEEEEECCCSSCE-----EEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC----CC--CEEEEEECSS
T ss_pred CCcEEEEEcCcCCce-----EEEEecCCCCCceeeeccc-----cccccccccccceeeeeecceeec--cceeeeecCC
Confidence 65321 111100000 11222 332222332222 36888999876543 333322221 12223222
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEE-EEcCCeEEEEECCCCcEE
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALI-YQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l-~~~~~~l~~ydl~t~~~~ 331 (366)
++++.+...... .+.||-+... ..+..+....- ...-+++.++|..++. ...++.+.+||.+++++.
T Consensus 226 ~~~~l~sg~~dg--~v~~wd~~~~------~~~~~~~~h~~----~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 226 QSEVFVFGDENG--TVSLVDTKST------SCVLSSAVHSQ----CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp CTTEEEEEETTS--EEEEEESCC--------CCEEEECCSS----CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred CCcceEEeccCC--cEEEEECCCC------cEEEEEcCCCC----CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 355555544433 7999977642 11222221111 3455778888864554 445667999999999764
Q ss_pred EEEEecC
Q 017755 332 VIEIRNE 338 (366)
Q Consensus 332 ~v~~~~~ 338 (366)
. ..++
T Consensus 294 ~--~~~H 298 (344)
T 4gqb_B 294 R--SQAH 298 (344)
T ss_dssp E--ECCC
T ss_pred E--EcCC
Confidence 4 3554
No 42
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.75 E-value=2.3 Score=38.50 Aligned_cols=207 Identities=11% Similarity=0.091 Sum_probs=104.8
Q ss_pred CCCceEEEe-cccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccc
Q 017755 90 NRGHTSVIG-CCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVD 168 (366)
Q Consensus 90 ~~~~~~~~~-s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~ 168 (366)
.+++..+++ |.+++|.+. .++.++|||..|++...+-..... ......+.+.|. ++|-+++ . .
T Consensus 104 ~d~y~~~l~wS~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~--------~~~V~sv~fspd-g~~lasg--s----~ 167 (420)
T 4gga_A 104 NDYYLNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQP--------GEYISSVAWIKE-GNYLAVG--T----S 167 (420)
T ss_dssp CCTTCBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCST--------TCCEEEEEECTT-SSEEEEE--E----T
T ss_pred ccccceeEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCC--------CCcEEEEEECCC-CCEEEEE--E----C
Confidence 344455555 556776554 367999999999987765333211 112334566663 3343332 1 3
Q ss_pred eeEEEEEEcCCCcEE-ecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeee
Q 017755 169 YLEVIIYSLKADTWR-RTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCS 247 (366)
Q Consensus 169 ~~~~~vyss~~~~W~-~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~ 247 (366)
.-.+.+++..++.-. ....-. .....+..+|.+-..+..+ ..+..+|..........+..+.. ...
T Consensus 168 Dg~v~iWd~~~~~~~~~~~~h~-----~~v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h~~--~~~ 234 (420)
T 4gga_A 168 SAEVQLWDVQQQKRLRNMTSHS-----ARVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQ--EVC 234 (420)
T ss_dssp TSCEEEEETTTTEEEEEECCCS-----SCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSS--CEE
T ss_pred CCeEEEEEcCCCcEEEEEeCCC-----CceEEEeeCCCEEEEEeCC------CceeEeeecccceeeEEeccccc--cee
Confidence 345778888776321 111100 0112345566554444443 37778887765443322222211 122
Q ss_pred EEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEE---cCCeEEEE
Q 017755 248 QVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQ---HSRCLHWY 323 (366)
Q Consensus 248 ~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~---~~~~l~~y 323 (366)
.+... +|+..+...... .+.||...... ..+..+.......- ....+++.+++..++... .++.+.+|
T Consensus 235 ~~~~~~~g~~l~s~~~D~--~v~i~~~~~~~--~~~~~~~~~~~~~~----~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 235 GLRWAPDGRHLASGGNDN--LVNVWPSAPGE--GGWVPLQTFTQHQG----AVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp EEEECTTSSEEEEEETTS--CEEEEESSCCS--SCSCCSEEECCCSS----CEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred eeeecCCCCeeeeeeccc--cceEEeecccc--ccceeeeeecccCC----ceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 22222 455555444444 68999887532 22222222211111 244466666554354432 34569999
Q ss_pred ECCCCcEEEE
Q 017755 324 NLKDHKQDVI 333 (366)
Q Consensus 324 dl~t~~~~~v 333 (366)
|+++++....
T Consensus 307 d~~t~~~~~~ 316 (420)
T 4gga_A 307 NVCSGACLSA 316 (420)
T ss_dssp ETTTTEEEEE
T ss_pred eCCcccccee
Confidence 9999886554
No 43
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=94.74 E-value=2.3 Score=38.40 Aligned_cols=195 Identities=13% Similarity=0.095 Sum_probs=103.1
Q ss_pred cccceEEeee-cCceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEE
Q 017755 99 CCHGLLAMFN-RRLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYS 176 (366)
Q Consensus 99 s~nGLl~~~~-~~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vys 176 (366)
+.+|-+++.. ..+.+.+||+.+++... ++... .....+.++|..+ +-++. . ...-.+.+|+
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~-~l~~~--~---~~~~~i~~~d 240 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG-----------KWSKILLYDPIRD-LVYCS--N---WISEDISVID 240 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS-----------SSEEEEEEETTTT-EEEEE--E---TTTTEEEEEE
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC-----------CCeeEEEEcCCCC-EEEEE--e---cCCCcEEEEE
Confidence 4566655443 45789999998876543 33111 1133456666433 22122 1 1233678889
Q ss_pred cCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCC--CcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEE
Q 017755 177 LKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRT--GQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGV 251 (366)
Q Consensus 177 s~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~--~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~ 251 (366)
.+++.....-...... .++.+ +|...+.+....... ....|..+|+.+.+.... ..+.. ...+..
T Consensus 241 ~~~~~~~~~~~~~~~~-----~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~-----~~~~~~ 310 (433)
T 3bws_A 241 RKTKLEIRKTDKIGLP-----RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN-----KRHIVS 310 (433)
T ss_dssp TTTTEEEEECCCCSEE-----EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC-----EEEEEE
T ss_pred CCCCcEEEEecCCCCc-----eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC-----cceEEE
Confidence 8877553322111111 12222 565555554321100 114788999987765333 22211 112222
Q ss_pred E-CC-EEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC------------
Q 017755 252 L-RG-CLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS------------ 317 (366)
Q Consensus 252 ~-~G-~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~------------ 317 (366)
. +| .|++...... .+.+|.++. ...+..+.... ...-+++.++|+.+++....
T Consensus 311 ~~~g~~l~~~~~~~~--~v~v~d~~~------~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g 377 (433)
T 3bws_A 311 GNTENKIYVSDMCCS--KIEVYDLKE------KKVQKSIPVFD-----KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKG 377 (433)
T ss_dssp CSSTTEEEEEETTTT--EEEEEETTT------TEEEEEEECSS-----SEEEEEECTTSSEEEEEECCCCCTTTCTTSCC
T ss_pred CCCCCEEEEEecCCC--EEEEEECCC------CcEEEEecCCC-----CCCeEEEcCCCCEEEEEecCCCcccccccccc
Confidence 2 35 4555544333 789998763 22334443322 24567888899877776643
Q ss_pred ---CeEEEEECCCCcEEEE
Q 017755 318 ---RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 318 ---~~l~~ydl~t~~~~~v 333 (366)
+.+.+||+++++....
T Consensus 378 ~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 378 LVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp SSCCEEEEEETTTTEEEEE
T ss_pred ccceEEEEEECCCCcEEEE
Confidence 3799999999876543
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.58 E-value=0.76 Score=40.81 Aligned_cols=189 Identities=10% Similarity=0.101 Sum_probs=88.0
Q ss_pred cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCc-EEecCC
Q 017755 109 RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADT-WRRTRE 187 (366)
Q Consensus 109 ~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~-W~~~~~ 187 (366)
..+.+.|||..++.+..+-..... ......+.+.|.. ++ ++.. . ..-.+.+|+..++. |+....
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h--------~~~v~~~~~s~~~-~~-l~s~-s----~d~~v~vwd~~~~~~~~~~~~ 95 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDH--------DKIVTCVDWAPKS-NR-IVTC-S----QDRNAYVYEKRPDGTWKQTLV 95 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCC--------SSCEEEEEECTTT-CC-EEEE-E----TTSSEEEC------CCCCEEE
T ss_pred CCCEEEEEEccCCceEEEEEEecC--------CceEEEEEEeCCC-CE-EEEE-e----CCCeEEEEEcCCCCceeeeeE
Confidence 456778899888754444333221 1123345666643 22 2221 1 22347777777665 543322
Q ss_pred CCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCce----eEEECCCCCCCCCeeeEEEEE-CCEEEEEE
Q 017755 188 FPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEK----FYEVQQPHGMKGGFCSQVGVL-RGCLWINS 260 (366)
Q Consensus 188 ~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~----~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~ 260 (366)
+..... ....+.+ +|.....+..+ ..|..+|+.+.+ ...+..|... ....+.-. +|++.+..
T Consensus 96 ~~~~~~--~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 96 LLRLNR--AATFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLKRPLRS---TILSLDWHPNNVLLAAG 164 (377)
T ss_dssp CCCCSS--CEEEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEECSSCCS---CEEEEEECTTSSEEEEE
T ss_pred ecccCC--ceEEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEeecccCC---CeEEEEEcCCCCEEEEE
Confidence 111000 0011211 45544444443 368888888765 3444443221 12233333 45555554
Q ss_pred ecCCCCeEEEEEEeecCC-----CCCee-------EEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCC
Q 017755 261 YYHDEPRCDIWVMKEYGS-----QQSWS-------KLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDH 328 (366)
Q Consensus 261 ~~~~~~~l~iW~l~~~~~-----~~~W~-------~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~ 328 (366)
.... .+.+|-+...+. ...|. .+..+ ... ....-+++.++|+.++....++.+.+||++++
T Consensus 165 ~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 165 CADR--KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---PSG--GWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp ESSS--CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---CCS--SSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred eCCC--EEEEEEEEecccCCCccccccccccchhhhhhcc---cCC--ceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 4444 699999853211 11221 12222 111 13556788889986777777778999999988
Q ss_pred cE
Q 017755 329 KQ 330 (366)
Q Consensus 329 ~~ 330 (366)
+.
T Consensus 238 ~~ 239 (377)
T 3dwl_C 238 EQ 239 (377)
T ss_dssp TS
T ss_pred CC
Confidence 75
No 45
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.50 E-value=0.47 Score=40.53 Aligned_cols=110 Identities=7% Similarity=0.050 Sum_probs=72.1
Q ss_pred EECCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCC
Q 017755 201 FIAGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQ 279 (366)
Q Consensus 201 ~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~ 279 (366)
+.+|.||.-+.... .|..+|+++.+. ..+ +|... +-.-+...+++|+++..... .+|+.+-
T Consensus 62 ~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~~~---FgeGit~~g~~Ly~ltw~~~----~v~V~D~---- 123 (268)
T 3nok_A 62 FHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLGNI---FAEGLASDGERLYQLTWTEG----LLFTWSG---- 123 (268)
T ss_dssp EETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECTTC---CEEEEEECSSCEEEEESSSC----EEEEEET----
T ss_pred EECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCCCc---ceeEEEEeCCEEEEEEccCC----EEEEEEC----
Confidence 44667776665542 599999998776 445 66543 23346777889999865433 5677664
Q ss_pred CCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcE-EEEEE
Q 017755 280 QSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ-DVIEI 335 (366)
Q Consensus 280 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~-~~v~~ 335 (366)
.+-..+.+|....- ..++..+|+.+++......+..+|++|.+. +.|.+
T Consensus 124 ~Tl~~~~ti~~~~e-------GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 124 MPPQRERTTRYSGE-------GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp TTTEEEEEEECSSC-------CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CcCcEEEEEeCCCc-------eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 33556677776431 145556788777776566799999999775 55554
No 46
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.39 E-value=2.2 Score=36.65 Aligned_cols=207 Identities=8% Similarity=-0.012 Sum_probs=101.4
Q ss_pred EecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEE
Q 017755 97 IGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIY 175 (366)
Q Consensus 97 ~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vy 175 (366)
.+..+|-|...+ ....++.+||.+++...+.... . ..++.+++..+ -+++. ...+.+|
T Consensus 20 w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~----------~--~~~i~~~~dG~--l~v~~-------~~~l~~~ 78 (297)
T 3g4e_A 20 WEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA----------P--VSSVALRQSGG--YVATI-------GTKFCAL 78 (297)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCEEEEECSS----------C--EEEEEEBTTSS--EEEEE-------TTEEEEE
T ss_pred EECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC----------c--eEEEEECCCCC--EEEEE-------CCeEEEE
Confidence 344444444443 4668899999998875543221 1 23566776543 22221 2367888
Q ss_pred EcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCC-----CCcceEEEEECCCceeEEECCCCCCCCCeeeE
Q 017755 176 SLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVR-----TGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQ 248 (366)
Q Consensus 176 ss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~-----~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~ 248 (366)
+..++.++.+...+..........+.+ +|.+|+-....... .....|..+|.... ...+.- ... ..-.
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~--~~~--~png 153 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFD--QVD--ISNG 153 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEE--EES--BEEE
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEee--ccc--cccc
Confidence 998888876643221111111112333 68866544332110 11247888887643 222210 000 0112
Q ss_pred EEEE-CC-EEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEe-cCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEE
Q 017755 249 VGVL-RG-CLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSF-SKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYN 324 (366)
Q Consensus 249 l~~~-~G-~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~yd 324 (366)
++.. +| .|+++..... .+.+|.++.. .........+ ......+ ...-+++.++|. +++... ...+..||
T Consensus 154 i~~spdg~~lyv~~~~~~--~i~~~~~d~~--~G~~~~~~~~~~~~~~~~--~p~g~~~d~~G~-lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 154 LDWSLDHKIFYYIDSLSY--SVDAFDYDLQ--TGQISNRRSVYKLEKEEQ--IPDGMCIDAEGK-LWVACYNGGRVIRLD 226 (297)
T ss_dssp EEECTTSCEEEEEEGGGT--EEEEEEECTT--TCCEEEEEEEEECCGGGC--EEEEEEEBTTSC-EEEEEETTTEEEEEC
T ss_pred eEEcCCCCEEEEecCCCC--cEEEEeccCC--CCcccCcEEEEECCCCCC--CCCeeEECCCCC-EEEEEcCCCEEEEEc
Confidence 3332 45 4666655433 4555554311 2233322211 1111101 233366677887 777764 45699999
Q ss_pred CCCCcE-EEEEEe
Q 017755 325 LKDHKQ-DVIEIR 336 (366)
Q Consensus 325 l~t~~~-~~v~~~ 336 (366)
++|++. ..+.+.
T Consensus 227 ~~tG~~~~~i~~p 239 (297)
T 3g4e_A 227 PVTGKRLQTVKLP 239 (297)
T ss_dssp TTTCCEEEEEECS
T ss_pred CCCceEEEEEECC
Confidence 997775 455443
No 47
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.90 E-value=3.1 Score=36.54 Aligned_cols=185 Identities=11% Similarity=0.129 Sum_probs=89.0
Q ss_pred eecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecC
Q 017755 107 FNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTR 186 (366)
Q Consensus 107 ~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~ 186 (366)
...++.+.|||..++++.........+ ......+.+.|.. ++ ++. .. ....+.+++..++.++.+.
T Consensus 34 ~~~D~~i~iw~~~~~~~~~~~~~~~~h-------~~~v~~~~~sp~g-~~-l~s-~s----~D~~v~iw~~~~~~~~~~~ 99 (345)
T 3fm0_A 34 CGGDRRIRIWGTEGDSWICKSVLSEGH-------QRTVRKVAWSPCG-NY-LAS-AS----FDATTCIWKKNQDDFECVT 99 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECSSC-------SSCEEEEEECTTS-SE-EEE-EE----TTSCEEEEEECCC-EEEEE
T ss_pred EcCCCeEEEEEcCCCcceeeeeecccc-------CCcEEEEEECCCC-CE-EEE-EE----CCCcEEEEEccCCCeEEEE
Confidence 345667889988877643221111111 1123346666642 22 222 11 2234566776666554332
Q ss_pred CCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCce-eEEE-CCCCCCCCCeeeEEEEE-CCEEEEEEe
Q 017755 187 EFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEK-FYEV-QQPHGMKGGFCSQVGVL-RGCLWINSY 261 (366)
Q Consensus 187 ~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~-~~~i-~~P~~~~~~~~~~l~~~-~G~L~~v~~ 261 (366)
.+..... .-..+.+ +|.+...+..+ ..|..+|+.++. ...+ .+..+.. ....+.-. +|.+.+...
T Consensus 100 ~~~~h~~--~v~~v~~sp~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 100 TLEGHEN--EVKSVAWAPSGNLLATCSRD------KSVWVWEVDEEDEYECVSVLNSHTQ--DVKHVVWHPSQELLASAS 169 (345)
T ss_dssp EECCCSS--CEEEEEECTTSSEEEEEETT------SCEEEEEECTTSCEEEEEEECCCCS--CEEEEEECSSSSCEEEEE
T ss_pred EccCCCC--CceEEEEeCCCCEEEEEECC------CeEEEEECCCCCCeEEEEEecCcCC--CeEEEEECCCCCEEEEEe
Confidence 2111000 0011222 45544444443 368888886542 2222 1111111 12222222 355544444
Q ss_pred cCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEEC
Q 017755 262 YHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNL 325 (366)
Q Consensus 262 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl 325 (366)
... .+.+|.++. ..|.....+....- ...-+.+.++|+.++-...++.+.+||.
T Consensus 170 ~d~--~i~~w~~~~----~~~~~~~~~~~h~~----~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 170 YDD--TVKLYREEE----DDWVCCATLEGHES----TVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp TTS--CEEEEEEET----TEEEEEEEECCCSS----CEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCC--cEEEEEecC----CCEEEEEEecCCCC----ceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 444 699998874 44765555543221 3556788889986666666777888885
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.88 E-value=3.1 Score=36.41 Aligned_cols=199 Identities=8% Similarity=0.006 Sum_probs=101.5
Q ss_pred cceEEeeec-----CceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEE
Q 017755 101 HGLLAMFNR-----RLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVII 174 (366)
Q Consensus 101 nGLl~~~~~-----~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~v 174 (366)
+|++.+... ...+.++||.|++... ++...... .- ......+.++. +.-.+.. ...-.+.+
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~-~l----g~~~~~i~~~~---~~lyv~~-----~~~~~v~v 68 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGF-KL----GDVAQSMVIRD---GIGWIVV-----NNSHVIFA 68 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSS-CC----BSCEEEEEEET---TEEEEEE-----GGGTEEEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCc-cc----CccceEEEEEC---CEEEEEE-----cCCCEEEE
Confidence 455554432 5689999999998753 21100000 00 11122333332 2222221 13346888
Q ss_pred EEcCCCcE-EecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCC-CCCeeeEEEE
Q 017755 175 YSLKADTW-RRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGM-KGGFCSQVGV 251 (366)
Q Consensus 175 yss~~~~W-~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~-~~~~~~~l~~ 251 (366)
++..+++- +.+........ -.+.-+|.+|.....+ ..|.++|+.+.+.. .++.+... ....-..++.
T Consensus 69 iD~~t~~~~~~i~~~~~p~~----i~~~~~g~lyv~~~~~------~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~ 138 (328)
T 3dsm_A 69 IDINTFKEVGRITGFTSPRY----IHFLSDEKAYVTQIWD------YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ 138 (328)
T ss_dssp EETTTCCEEEEEECCSSEEE----EEEEETTEEEEEEBSC------SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE
T ss_pred EECcccEEEEEcCCCCCCcE----EEEeCCCeEEEEECCC------CeEEEEECCCCeEEEEEEcCCccccCCCcceEEE
Confidence 88887754 33321111100 0123578887776433 38999999998765 45655411 0001112333
Q ss_pred ECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-----------CeE
Q 017755 252 LRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-----------RCL 320 (366)
Q Consensus 252 ~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-----------~~l 320 (366)
.+|+|++...... +.+.++-++. .+. +.++..... ..-+.+.++|+ +++.... ..+
T Consensus 139 ~~~~lyv~~~~~~-~~v~viD~~t----~~~--~~~i~~g~~-----p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 139 YGKYVYVNCWSYQ-NRILKIDTET----DKV--VDELTIGIQ-----PTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp ETTEEEEEECTTC-CEEEEEETTT----TEE--EEEEECSSC-----BCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEE
T ss_pred ECCEEEEEcCCCC-CEEEEEECCC----CeE--EEEEEcCCC-----ccceEEcCCCC-EEEEECCCccCCccccCCceE
Confidence 6889988865212 2444443332 223 233433221 22256677887 6665543 469
Q ss_pred EEEECCCCcEE-EEEE
Q 017755 321 HWYNLKDHKQD-VIEI 335 (366)
Q Consensus 321 ~~ydl~t~~~~-~v~~ 335 (366)
..+|++|+++. .+.+
T Consensus 206 ~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 206 YRIDAETFTVEKQFKF 221 (328)
T ss_dssp EEEETTTTEEEEEEEC
T ss_pred EEEECCCCeEEEEEec
Confidence 99999999876 3444
No 49
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.83 E-value=2.9 Score=36.03 Aligned_cols=107 Identities=10% Similarity=0.086 Sum_probs=54.7
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEEC-CEEEEEEecCCCCeEEEEEEeecCCCC
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVLR-GCLWINSYYHDEPRCDIWVMKEYGSQQ 280 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~~-G~L~~v~~~~~~~~l~iW~l~~~~~~~ 280 (366)
+|.+...+..+ ..|..+|+.+.+-.. +..... ...+.... +.+. +..... .+.||-++..
T Consensus 226 ~~~~l~s~s~D------g~i~iwd~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~-~~~~d~--~i~iwd~~~~---- 287 (340)
T 4aow_A 226 DGSLCASGGKD------GQAMLWDLNEGKHLYTLDGGDI-----INALCFSPNRYWL-CAATGP--SIKIWDLEGK---- 287 (340)
T ss_dssp TSSEEEEEETT------CEEEEEETTTTEEEEEEECSSC-----EEEEEECSSSSEE-EEEETT--EEEEEETTTT----
T ss_pred CCCEEEEEeCC------CeEEEEEeccCceeeeecCCce-----EEeeecCCCCcee-eccCCC--EEEEEECCCC----
Confidence 45554444443 378889998765422 232211 12222223 3433 333333 7888976531
Q ss_pred CeeEEEEecCCCC----CCcc-eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCc
Q 017755 281 SWSKLCSFSKMLH----ETCY-YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 281 ~W~~~~~i~~~~~----~~~~-~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~ 329 (366)
..+..+..... .... ...-+++.++|+.++-...++.+.+||++||+
T Consensus 288 --~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 288 --IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp --EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred --eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 11222221111 0111 34557888999966666677779999999985
No 50
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.60 E-value=3.4 Score=36.09 Aligned_cols=193 Identities=12% Similarity=-0.014 Sum_probs=100.0
Q ss_pred cceE-EeeecCceEEEEcCCCcce-EecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 101 HGLL-AMFNRRLGMSVFNPTTKKF-KLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 101 nGLl-~~~~~~~~~~V~NP~t~~~-~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
++.+ ......+.+.|+|+.|++. ..+|.... ..++.+++. . ++..... ..-.+.+++..
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~------------p~~i~~~~~--g-~lyv~~~----~~~~v~~iD~~ 113 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS------------PRYIHFLSD--E-KAYVTQI----WDYRIFIINPK 113 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS------------EEEEEEEET--T-EEEEEEB----SCSEEEEEETT
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC------------CcEEEEeCC--C-eEEEEEC----CCCeEEEEECC
Confidence 4444 3333457899999999887 45643221 224455433 3 4433221 24567888888
Q ss_pred CCcEEe-cCCCCcee--ecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEECC
Q 017755 179 ADTWRR-TREFPYYI--LDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVLRG 254 (366)
Q Consensus 179 ~~~W~~-~~~~p~~~--~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~~G 254 (366)
+++-.. ++ ..... ......-+..+|.+|....... ..|.++|+.+.+.. .++.+.... . ....-+|
T Consensus 114 t~~~~~~i~-~g~~~~~~~~p~~i~~~~~~lyv~~~~~~-----~~v~viD~~t~~~~~~i~~g~~p~---~-i~~~~dG 183 (328)
T 3dsm_A 114 TYEITGYIE-CPDMDMESGSTEQMVQYGKYVYVNCWSYQ-----NRILKIDTETDKVVDELTIGIQPT---S-LVMDKYN 183 (328)
T ss_dssp TTEEEEEEE-CTTCCTTTCBCCCEEEETTEEEEEECTTC-----CEEEEEETTTTEEEEEEECSSCBC---C-CEECTTS
T ss_pred CCeEEEEEE-cCCccccCCCcceEEEECCEEEEEcCCCC-----CEEEEEECCCCeEEEEEEcCCCcc---c-eEEcCCC
Confidence 875332 21 11100 0001112235667766643111 48999999987764 344433221 1 1112358
Q ss_pred EEEEEEecCCCC------eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCC
Q 017755 255 CLWINSYYHDEP------RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDH 328 (366)
Q Consensus 255 ~L~~v~~~~~~~------~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~ 328 (366)
++++++...... .-.|++++.. ..+-. ..+....- ....-+++.++|+.+|+... .++.+|++++
T Consensus 184 ~l~v~~~~~~~~~~~~~~~~~v~~id~~--t~~v~--~~~~~~~g---~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~ 254 (328)
T 3dsm_A 184 KMWTITDGGYEGSPYGYEAPSLYRIDAE--TFTVE--KQFKFKLG---DWPSEVQLNGTRDTLYWINN--DIWRMPVEAD 254 (328)
T ss_dssp EEEEEBCCBCTTCSSCBCCCEEEEEETT--TTEEE--EEEECCTT---CCCEEEEECTTSCEEEEESS--SEEEEETTCS
T ss_pred CEEEEECCCccCCccccCCceEEEEECC--CCeEE--EEEecCCC---CCceeEEEecCCCEEEEEcc--EEEEEECCCC
Confidence 888877643100 1245555532 12232 33332110 02455788888887777544 5999999998
Q ss_pred cEE
Q 017755 329 KQD 331 (366)
Q Consensus 329 ~~~ 331 (366)
++.
T Consensus 255 ~~~ 257 (328)
T 3dsm_A 255 RVP 257 (328)
T ss_dssp SCC
T ss_pred cee
Confidence 863
No 51
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.58 E-value=2.8 Score=35.02 Aligned_cols=202 Identities=12% Similarity=0.056 Sum_probs=103.1
Q ss_pred cccceEEeeecCceEEEEcCCC-cceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEc
Q 017755 99 CCHGLLAMFNRRLGMSVFNPTT-KKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSL 177 (366)
Q Consensus 99 s~nGLl~~~~~~~~~~V~NP~t-~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss 177 (366)
+-+|-.++......++++|..+ ++...+....... . ...+.+.|.. +.+............+..++.
T Consensus 50 spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-------~--~~~~~~spdg---~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATI-------C--NNDHGISPDG---ALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCC-------B--CSCCEECTTS---SEEEEEECTTTSSCEEEEEET
T ss_pred CCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccc-------c--ccceEECCCC---CEEEEEEeCCCCcceEEEEEC
Confidence 4455543333466899999999 8877665433111 1 1123444432 222222222224566677777
Q ss_pred CCCcEEecCCCCceeecCCCCceEECCe-EEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCE
Q 017755 178 KADTWRRTREFPYYILDDRCNGVFIAGA-LHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGC 255 (366)
Q Consensus 178 ~~~~W~~~~~~p~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~ 255 (366)
.++.-+.+........ ....-+|. +++....+. ...|..+|+.+.+...+..... ....+... +|+
T Consensus 118 ~~~~~~~~~~~~~~~~----~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~s~dg~ 185 (297)
T 2ojh_A 118 TGGTPRLMTKNLPSYW----HGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTHGEG----RNDGPDYSPDGR 185 (297)
T ss_dssp TCCCCEECCSSSSEEE----EEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCCSSS----CEEEEEECTTSS
T ss_pred CCCceEEeecCCCccc----eEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcccCCC----ccccceECCCCC
Confidence 7666555543221100 01122454 444444332 1467777787766655432221 12223222 465
Q ss_pred EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-----------CeEEEEE
Q 017755 256 LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-----------RCLHWYN 324 (366)
Q Consensus 256 L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-----------~~l~~yd 324 (366)
..++...... .+.||.++..+ .. ...+.... .....+.+.++|+.+++...+ ..++.||
T Consensus 186 ~l~~~~~~~~-~~~i~~~~~~~--~~---~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d 255 (297)
T 2ojh_A 186 WIYFNSSRTG-QMQIWRVRVDG--SS---VERITDSA----YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMD 255 (297)
T ss_dssp EEEEEECTTS-SCEEEEEETTS--SC---EEECCCCS----EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEE
T ss_pred EEEEEecCCC-CccEEEECCCC--CC---cEEEecCC----cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEe
Confidence 4443332222 68999998422 21 22222211 134456778899877776543 3599999
Q ss_pred CCCCcEEEEE
Q 017755 325 LKDHKQDVIE 334 (366)
Q Consensus 325 l~t~~~~~v~ 334 (366)
+++++.+.+.
T Consensus 256 ~~~~~~~~~~ 265 (297)
T 2ojh_A 256 MDGGNVETLF 265 (297)
T ss_dssp TTSCSCEEEE
T ss_pred cCCCCceeee
Confidence 9999887664
No 52
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.19 E-value=3.8 Score=35.31 Aligned_cols=108 Identities=10% Similarity=0.153 Sum_probs=60.5
Q ss_pred ceEEEEECCC-ceeE-----EECCCCCCCCCeeeEEEEE-CCE-EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCC
Q 017755 220 NMILAFDLKS-EKFY-----EVQQPHGMKGGFCSQVGVL-RGC-LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKM 291 (366)
Q Consensus 220 ~~i~~fD~~~-e~~~-----~i~~P~~~~~~~~~~l~~~-~G~-L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~ 291 (366)
..|..+|+.+ .+.. .+..+... .-..+... +|+ |++...... .+.+|.++.. ...+.....+...
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~pdg~~l~~~~~~~~--~i~~~~~~~~--~g~~~~~~~~~~~ 223 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGA---GPRHMVFHPNEQYAYCVNELNS--SVDVWELKDP--HGNIECVQTLDMM 223 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTC---CEEEEEECTTSSEEEEEETTTT--EEEEEESSCT--TSCCEEEEEEECS
T ss_pred CEEEEEEecCCCceeeecccccccCCCC---CcceEEECCCCCEEEEEeCCCC--EEEEEEecCC--CCcEEEEeecccc
Confidence 3788999987 6554 23333321 11223322 455 555543333 7999998752 2345444444321
Q ss_pred CC--CCcceeEEEEEEeCCCeEEEEE-cCCeEEEEECC--CCcEEEEE
Q 017755 292 LH--ETCYYTEAFAFSKDGDKALIYQ-HSRCLHWYNLK--DHKQDVIE 334 (366)
Q Consensus 292 ~~--~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~ydl~--t~~~~~v~ 334 (366)
.. .+.....-+.+.++|+.+++.. .+..+.+||++ +++.+.+.
T Consensus 224 ~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 224 PENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp CTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred CccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 11 1111344578888998777665 34569999998 66677664
No 53
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.13 E-value=3.8 Score=35.26 Aligned_cols=190 Identities=8% Similarity=0.053 Sum_probs=99.4
Q ss_pred cceEEee-ecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCC
Q 017755 101 HGLLAMF-NRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKA 179 (366)
Q Consensus 101 nGLl~~~-~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~ 179 (366)
.+.+.+. ...+.+.++|+.|++....-..+. .. . .+.++|..+ + ++.. . ...-.+.+++..+
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~---------~~-~-~~~~s~dg~-~-l~~~-~---~~~~~i~~~d~~~ 71 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGY---------DF-V-DTAITSDCS-N-VVVT-S---DFCQTLVQIETQL 71 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCC---------CE-E-EEEECSSSC-E-EEEE-E---STTCEEEEEECSS
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccC---------Cc-c-eEEEcCCCC-E-EEEE-e---CCCCeEEEEECCC
Confidence 3444333 345688999999998754322221 11 2 677777543 2 2222 1 1233778888877
Q ss_pred CcE--EecC--CCCce-eecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEE-
Q 017755 180 DTW--RRTR--EFPYY-ILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVL- 252 (366)
Q Consensus 180 ~~W--~~~~--~~p~~-~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~- 252 (366)
+.- +.+. .-|.. . .+.-+|..-+...... ....|..+|+.+.+... ++.+.. ...+...
T Consensus 72 ~~~~~~~~~~~~~~~~~~------~~s~dg~~l~~~~~~~---~~~~i~v~d~~~~~~~~~~~~~~~-----~~~~~~sp 137 (331)
T 3u4y_A 72 EPPKVVAIQEGQSSMADV------DITPDDQFAVTVTGLN---HPFNMQSYSFLKNKFISTIPIPYD-----AVGIAISP 137 (331)
T ss_dssp SSCEEEEEEECSSCCCCE------EECTTSSEEEECCCSS---SSCEEEEEETTTTEEEEEEECCTT-----EEEEEECT
T ss_pred CceeEEecccCCCCccce------EECCCCCEEEEecCCC---CcccEEEEECCCCCeEEEEECCCC-----ccceEECC
Confidence 653 2221 11111 1 1222454333333221 01279999998876533 333222 1233333
Q ss_pred CCE-EEEEEecCCCCe-EEEEEEeecCCCCCeeE-EEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEECCCC
Q 017755 253 RGC-LWINSYYHDEPR-CDIWVMKEYGSQQSWSK-LCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNLKDH 328 (366)
Q Consensus 253 ~G~-L~~v~~~~~~~~-l~iW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t~ 328 (366)
+|+ |++...... . +.+|.++..+ ..... ...+.... ...-+.+.++|+.+++... +..+.+||++++
T Consensus 138 dg~~l~~~~~~~~--~~i~~~~~~~~g--~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 208 (331)
T 3u4y_A 138 NGNGLILIDRSSA--NTVRRFKIDADG--VLFDTGQEFISGGT-----RPFNITFTPDGNFAFVANLIGNSIGILETQNP 208 (331)
T ss_dssp TSSCEEEEEETTT--TEEEEEEECTTC--CEEEEEEEEECSSS-----SEEEEEECTTSSEEEEEETTTTEEEEEECSST
T ss_pred CCCEEEEEecCCC--ceEEEEEECCCC--cEeecCCccccCCC-----CccceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 464 666555433 5 9999998532 11111 11221111 2455788899987777664 456999999998
Q ss_pred cE
Q 017755 329 KQ 330 (366)
Q Consensus 329 ~~ 330 (366)
+.
T Consensus 209 ~~ 210 (331)
T 3u4y_A 209 EN 210 (331)
T ss_dssp TS
T ss_pred cc
Confidence 85
No 54
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.80 E-value=8.1 Score=38.13 Aligned_cols=190 Identities=11% Similarity=0.040 Sum_probs=97.1
Q ss_pred cceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCC
Q 017755 101 HGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKAD 180 (366)
Q Consensus 101 nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~ 180 (366)
+.+|......+.+.|||..+++....-... ......+.+.|.. .+ ++ ... ....+.+|+..++
T Consensus 67 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~----------~~~v~~~~~s~~~-~~-l~-~~~----~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAH----------PDYIRSIAVHPTK-PY-VL-SGS----DDLTVKLWNWENN 129 (814)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEEEEECC----------SSCEEEEEECSSS-SE-EE-EEE----TTSEEEEEEGGGT
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEecC----------CCCEEEEEEeCCC-CE-EE-EEc----CCCEEEEEECCCC
Confidence 344555556788999999988765422111 1112345555532 22 22 221 3345778887665
Q ss_pred -cEEec-CCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEE--
Q 017755 181 -TWRRT-REFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVL-- 252 (366)
Q Consensus 181 -~W~~~-~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~-- 252 (366)
..... ..-.... ..+.. +|.....+..+ ..|..+|+.+.+... +..+... ....+.-.
T Consensus 130 ~~~~~~~~~~~~~v-----~~~~~~p~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~~---~v~~~~~~~~ 195 (814)
T 3mkq_A 130 WALEQTFEGHEHFV-----MCVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQER---GVNYVDYYPL 195 (814)
T ss_dssp SEEEEEEECCSSCE-----EEEEEETTEEEEEEEEETT------SEEEEEETTCSSCSEEEECCCTT---CCCEEEECCS
T ss_pred ceEEEEEcCCCCcE-----EEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcceeEEecCCCC---CEEEEEEEEC
Confidence 22211 1100000 12222 34444444443 378899987654322 2222211 11122222
Q ss_pred -CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEE
Q 017755 253 -RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 253 -~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
+|.+.++..... .+.+|-++. ...+..+....- ....+.+.++|..++....++.+.+||+.+++..
T Consensus 196 ~~~~~l~~~~~dg--~i~~~d~~~------~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 196 PDKPYMITASDDL--TIKIWDYQT------KSCVATLEGHMS----NVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp TTCCEEEEECTTS--EEEEEETTT------TEEEEEEECCSS----CEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred CCCCEEEEEeCCC--EEEEEECCC------CcEEEEEcCCCC----CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 455555554444 799997753 122333332111 3555778889986666666777999999987754
Q ss_pred EE
Q 017755 332 VI 333 (366)
Q Consensus 332 ~v 333 (366)
..
T Consensus 264 ~~ 265 (814)
T 3mkq_A 264 KT 265 (814)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 55
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.80 E-value=2.2 Score=38.19 Aligned_cols=199 Identities=12% Similarity=-0.008 Sum_probs=93.9
Q ss_pred ceEEeeecCceEEEEcCCCcc------eEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEE
Q 017755 102 GLLAMFNRRLGMSVFNPTTKK------FKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIY 175 (366)
Q Consensus 102 GLl~~~~~~~~~~V~NP~t~~------~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vy 175 (366)
.+++....++.+.+||..+++ ........... ......+.+.|..+.+-+.+ ...-.+.+|
T Consensus 127 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~------~~dg~v~iw 193 (416)
T 2pm9_A 127 NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS-------VDEVISLAWNQSLAHVFASA------GSSNFASIW 193 (416)
T ss_dssp TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS-------SCCCCEEEECSSCTTEEEEE------SSSSCEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCccccccccccccccccCC-------CCCeeEEEeCCCCCcEEEEE------cCCCCEEEE
Confidence 344444456789999998876 22211111111 11233455665433332222 233457888
Q ss_pred EcCCCcEEecCCCCceee--cCCCCceEE--CC-eEEEEEeeCCCCCCcceEEEEECCCceeEEECCC-CCCCCCeeeEE
Q 017755 176 SLKADTWRRTREFPYYIL--DDRCNGVFI--AG-ALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQP-HGMKGGFCSQV 249 (366)
Q Consensus 176 ss~~~~W~~~~~~p~~~~--~~~~~~v~~--~G-~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P-~~~~~~~~~~l 249 (366)
+.+++.-...-..+.... ......+.+ +| .+...+..+.. ...|..+|+.+..-....+. .+. .....+
T Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~~~i~~~d~~~~~~~~~~~~~~~~--~~v~~~ 268 (416)
T 2pm9_A 194 DLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN---DPSILIWDLRNANTPLQTLNQGHQ--KGILSL 268 (416)
T ss_dssp ETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS---SCCCCEEETTSTTSCSBCCCSCCS--SCEEEE
T ss_pred ECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC---CceEEEEeCCCCCCCcEEeecCcc--CceeEE
Confidence 887764432211110000 000012222 23 34444433310 01688888887431111121 111 112233
Q ss_pred EEE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCC-CeEEEEEcCCeEEEEECC
Q 017755 250 GVL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDG-DKALIYQHSRCLHWYNLK 326 (366)
Q Consensus 250 ~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g-~~i~l~~~~~~l~~ydl~ 326 (366)
.-. +|.+.+...... .+.+|-++.. ..+..+....- ...-+.+.++| ..++....++.+.+||++
T Consensus 269 ~~s~~~~~~l~s~~~dg--~v~~wd~~~~------~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 269 DWCHQDEHLLLSSGRDN--TVLLWNPESA------EQLSQFPARGN----WCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp EECSSCSSCEEEEESSS--EEEEECSSSC------CEEEEEECSSS----CCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred EeCCCCCCeEEEEeCCC--CEEEeeCCCC------ccceeecCCCC----ceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 332 466655555444 7999987642 23444432111 23346788888 644444566779999998
Q ss_pred CCcE
Q 017755 327 DHKQ 330 (366)
Q Consensus 327 t~~~ 330 (366)
+.+.
T Consensus 337 ~~~~ 340 (416)
T 2pm9_A 337 NLTN 340 (416)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8763
No 56
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.73 E-value=4.5 Score=35.78 Aligned_cols=198 Identities=9% Similarity=-0.020 Sum_probs=88.8
Q ss_pred cccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 99 CCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 99 s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
+.+|.++.....+.+.|||..+++........... + ......+.+.|.. ++ ++.. . ..-.+.+|+..
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~-h-----~~~V~~v~~spdg-~~-l~sg-s----~dg~v~iwd~~ 169 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLLVNKFAKYE-H-----DDIVKTLSVFSDG-TQ-AVSG-G----KDFSVKVWDLS 169 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------CCCCEEECC-C-----SSCEEEEEECSSS-SE-EEEE-E----TTSCEEEEETT
T ss_pred cCCCCEEEEECCCEEEEeeccccceeEEEeeccCC-C-----CCCEEEEEECCCC-CE-EEEE-e----CCCeEEEEECC
Confidence 33555555556778999999998765443322111 1 1123345555532 22 2221 1 23346777777
Q ss_pred CCcEEe-cCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEE--
Q 017755 179 ADTWRR-TREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVL-- 252 (366)
Q Consensus 179 ~~~W~~-~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~-- 252 (366)
++.-.. +..-.... ..+.+ +|.-+.+..... ..|..+|+.+.+... +..... ......+.-.
T Consensus 170 ~~~~~~~~~~h~~~v-----~~v~~s~~~~~~~~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~--~~~v~~v~~sp~ 237 (357)
T 4g56_B 170 QKAVLKSYNAHSSEV-----NCVAACPGKDTIFLSCGED-----GRILLWDTRKPKPATRIDFCAS--DTIPTSVTWHPE 237 (357)
T ss_dssp TTEEEEEECCCSSCE-----EEEEECTTCSSCEEEEETT-----SCEEECCTTSSSCBCBCCCTTC--CSCEEEEEECTT
T ss_pred CCcEEEEEcCCCCCE-----EEEEEccCCCceeeeeccC-----CceEEEECCCCceeeeeeeccc--cccccchhhhhc
Confidence 664322 11100000 12222 233222232222 368888988765422 222211 1112223222
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEE-EEcCCeEEEEECCCCcEE
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALI-YQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l-~~~~~~l~~ydl~t~~~~ 331 (366)
++.+.+...... .+.+|-+.... .+..+....- ...-+++.++|..++. ...++.+.+||+++++..
T Consensus 238 ~~~~la~g~~d~--~i~~wd~~~~~------~~~~~~~~~~----~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 238 KDDTFACGDETG--NVSLVNIKNPD------SAQTSAVHSQ----NITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp STTEEEEEESSS--CEEEEESSCGG------GCEEECCCSS----CEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred ccceEEEeeccc--ceeEEECCCCc------EeEEEeccce----eEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 345554444333 69999876521 1222221111 2455777887754554 445667999999998764
Q ss_pred EE
Q 017755 332 VI 333 (366)
Q Consensus 332 ~v 333 (366)
..
T Consensus 306 ~~ 307 (357)
T 4g56_B 306 RD 307 (357)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 57
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.61 E-value=4.8 Score=35.04 Aligned_cols=170 Identities=12% Similarity=0.150 Sum_probs=87.1
Q ss_pred EeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC-CCcEEecCC--CCceeecCCCCceEECCeEEEEEeeCCCCCCcc
Q 017755 144 FDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK-ADTWRRTRE--FPYYILDDRCNGVFIAGALHWLAARGSVRTGQN 220 (366)
Q Consensus 144 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~-~~~W~~~~~--~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~ 220 (366)
...+.++|..+ ++.. . ...-.+.+|+.. ++....... .+..... ..-.+.-+|+..++..... .
T Consensus 143 ~~~~~~spdg~---l~v~-~---~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p-~~~~~spdg~~l~v~~~~~-----~ 209 (347)
T 3hfq_A 143 IHYTDLTPDNR---LAVI-D---LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGP-RHLVFSPDGQYAFLAGELS-----S 209 (347)
T ss_dssp EEEEEECTTSC---EEEE-E---TTTTEEEEEEECTTSCEEEEEEEECCTTCCE-EEEEECTTSSEEEEEETTT-----T
T ss_pred ceEEEECCCCc---EEEE-e---CCCCEEEEEEECCCCcEEEeeeEEcCCCCCC-ceEEECCCCCEEEEEeCCC-----C
Confidence 34567777644 2222 1 123367788887 555543321 1110000 0001223676333333322 2
Q ss_pred eEEEEECC--CceeEEE----CCCCCCCC-CeeeEEEEE-CCE-EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCC
Q 017755 221 MILAFDLK--SEKFYEV----QQPHGMKG-GFCSQVGVL-RGC-LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKM 291 (366)
Q Consensus 221 ~i~~fD~~--~e~~~~i----~~P~~~~~-~~~~~l~~~-~G~-L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~ 291 (366)
.|..+|+. +.++..+ ..|..... .....+... +|+ |++...... .+.+|.++.. ..+..+..+...
T Consensus 210 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~--~v~v~~~~~~---g~~~~~~~~~~~ 284 (347)
T 3hfq_A 210 QIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN--TLAVFAVTAD---GHLTLIQQISTE 284 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT--EEEEEEECGG---GCEEEEEEEECS
T ss_pred EEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC--EEEEEEECCC---CcEEEeEEEecC
Confidence 45555544 5665433 33433211 112233333 465 555544333 7999999852 346666655542
Q ss_pred CCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEE--ECCCCcEEEEEE
Q 017755 292 LHETCYYTEAFAFSKDGDKALIYQHS-RCLHWY--NLKDHKQDVIEI 335 (366)
Q Consensus 292 ~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~y--dl~t~~~~~v~~ 335 (366)
.- ...-+++.++|+.+++...+ ..+.+| |.++++++.+.-
T Consensus 285 ~~----~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 285 GD----FPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp SS----CCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred CC----CcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEeccc
Confidence 21 23447888999977777654 456666 888999998853
No 58
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.40 E-value=4.9 Score=35.09 Aligned_cols=140 Identities=10% Similarity=0.012 Sum_probs=77.2
Q ss_pred eeEEEEEEcCCCcEEecCCCCceeecCCCCce--EECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCe
Q 017755 169 YLEVIIYSLKADTWRRTREFPYYILDDRCNGV--FIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGF 245 (366)
Q Consensus 169 ~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v--~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~ 245 (366)
...+.+|+..++.|+.+..+..... ....+ .-+|.+...+..+ ..|..+|+.+.++... .+..... .
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~--~ 98 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKEHNG--QVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGRTWKPTLVILRINR--A 98 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEECCSS--CEEEEEEETTTTEEEEEETT------SCEEEEEEETTEEEEEEECCCCSS--C
T ss_pred CCEEEEEeCCCCcEEeeeeecCCCC--cccEEEEeCCCCEEEEEcCC------CeEEEEECCCCeeeeeEEeecCCC--c
Confidence 4568888888887665543221100 00112 2245555555443 3688899988876543 3322211 1
Q ss_pred eeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEE
Q 017755 246 CSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYN 324 (366)
Q Consensus 246 ~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 324 (366)
...+.-. +|+..++..... .+.+|.++.. ..|.....+....- . ...-+.+.++|+.++....++.+.+||
T Consensus 99 v~~~~~~~~~~~l~~~~~d~--~v~i~d~~~~---~~~~~~~~~~~~~~-~--~i~~~~~~~~~~~l~~~~~dg~i~~~d 170 (372)
T 1k8k_C 99 ARCVRWAPNEKKFAVGSGSR--VISICYFEQE---NDWWVCKHIKKPIR-S--TVLSLDWHPNSVLLAAGSCDFKCRIFS 170 (372)
T ss_dssp EEEEEECTTSSEEEEEETTS--SEEEEEEETT---TTEEEEEEECTTCC-S--CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeEEEECCCCCEEEEEeCCC--EEEEEEecCC---CcceeeeeeecccC-C--CeeEEEEcCCCCEEEEEcCCCCEEEEE
Confidence 2223322 455555555444 6999999862 34554444432211 1 355677888888666666677799999
Q ss_pred CC
Q 017755 325 LK 326 (366)
Q Consensus 325 l~ 326 (366)
++
T Consensus 171 ~~ 172 (372)
T 1k8k_C 171 AY 172 (372)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 59
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.39 E-value=5.8 Score=35.43 Aligned_cols=203 Identities=10% Similarity=0.071 Sum_probs=103.0
Q ss_pred cc-eEEeeecCceEEEEcCCCcceEecC-CCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 101 HG-LLAMFNRRLGMSVFNPTTKKFKLFP-QFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 101 nG-Ll~~~~~~~~~~V~NP~t~~~~~lP-~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
+| +|+....++.+.|||..+++...-. ...... ... ......+.+.|....+-+.+ . ....+.+|+..
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~-~~h---~~~v~~~~~~p~~~~~l~s~-~-----~dg~i~iwd~~ 162 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITL-EGH---TKRVGIVAWHPTAQNVLLSA-G-----CDNVILVWDVG 162 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE-ECC---SSCEEEEEECSSBTTEEEEE-E-----TTSCEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEe-cCC---CCeEEEEEECcCCCCEEEEE-c-----CCCEEEEEECC
Confidence 44 4555556778999998887532100 000000 000 11233456666533322222 1 23457888888
Q ss_pred CCcEEe-c--CCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEE-
Q 017755 179 ADTWRR-T--REFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGV- 251 (366)
Q Consensus 179 ~~~W~~-~--~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~- 251 (366)
++.... + ..-.... ..+.+ +|.....+..+ ..|..+|+.+.+... +..+.... ....+.-
T Consensus 163 ~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~ 229 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTI-----YSVDWSRDGALICTSCRD------KRVRVIEPRKGTVVAEKDRPHEGT--RPVHAVFV 229 (402)
T ss_dssp TTEEEEEECTTTCCSCE-----EEEEECTTSSCEEEEETT------SEEEEEETTTTEEEEEEECSSCSS--SCCEEEEC
T ss_pred CCCccEEEecCCCCCce-----EEEEECCCCCEEEEEecC------CcEEEEeCCCCceeeeeccCCCCC--cceEEEEc
Confidence 775432 1 1111111 12222 56555555544 379999998876533 31222111 0112222
Q ss_pred ECCEEEEEEec-CCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEE-cCCeEEEEECCCCc
Q 017755 252 LRGCLWINSYY-HDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQ-HSRCLHWYNLKDHK 329 (366)
Q Consensus 252 ~~G~L~~v~~~-~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~ydl~t~~ 329 (366)
-+|++.++... .....+.+|-+.... . =.....+.... ...-+.+.++|+.+++.. .++.+.+||+++++
T Consensus 230 ~~~~~l~~g~~~~~d~~i~iwd~~~~~--~-~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 230 SEGKILTTGFSRMSERQVALWDTKHLE--E-PLSLQELDTSS-----GVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp STTEEEEEEECTTCCEEEEEEETTBCS--S-CSEEEECCCCS-----SCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCCcEEEEeccCCCCceEEEEcCcccc--C-CceEEeccCCC-----ceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 35776666531 122379999887532 1 11222232222 244567888999776666 46679999999988
Q ss_pred --EEEEE
Q 017755 330 --QDVIE 334 (366)
Q Consensus 330 --~~~v~ 334 (366)
+..+.
T Consensus 302 ~~~~~l~ 308 (402)
T 2aq5_A 302 PFLHYLS 308 (402)
T ss_dssp TCEEEEE
T ss_pred cceEeec
Confidence 66664
No 60
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.36 E-value=4.5 Score=34.07 Aligned_cols=192 Identities=9% Similarity=0.003 Sum_probs=95.7
Q ss_pred EEecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEE
Q 017755 96 VIGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVII 174 (366)
Q Consensus 96 ~~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~v 174 (366)
+.-..+|.+.+.. ....++++|| +++...+...... ....++.+|+.. ++... . .....+.+
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~---------~~~~~i~~~~~g---~l~v~-~---~~~~~i~~ 166 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKG---------SYPSFITLGSDN---ALWFT-E---NQNNAIGR 166 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT---------CCEEEEEECTTS---CEEEE-E---TTTTEEEE
T ss_pred eEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCC---------CCCceEEEcCCC---CEEEE-e---CCCCEEEE
Confidence 4444567665554 3568999999 7766554322111 123456667643 22221 1 12235666
Q ss_pred EEcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE
Q 017755 175 YSLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL 252 (366)
Q Consensus 175 yss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~ 252 (366)
|+. ++....... +... ....++.+ +|.+|+..... ..|..||+ +.++..+.+|.... .-..+...
T Consensus 167 ~~~-~g~~~~~~~-~~~~--~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~--~~~~i~~~ 233 (299)
T 2z2n_A 167 ITE-SGDITEFKI-PTPA--SGPVGITKGNDDALWFVEIIG------NKIGRITT-SGEITEFKIPTPNA--RPHAITAG 233 (299)
T ss_dssp ECT-TCCEEEEEC-SSTT--CCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTC--CEEEEEEC
T ss_pred EcC-CCcEEEeeC-CCCC--CcceeEEECCCCCEEEEccCC------ceEEEECC-CCcEEEEECCCCCC--CceeEEEC
Confidence 776 665554311 1000 00113333 57775544332 37999999 77777776663321 12344443
Q ss_pred -CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEE
Q 017755 253 -RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 253 -~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
+|.|++...... .+..+-. . .. +..+....- .....-+.+ ++|. +++......+..+|+++++++
T Consensus 234 ~~g~l~v~~~~~~--~i~~~d~--~---g~---~~~~~~~~~--~~~~~~i~~-~~g~-l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 234 AGIDLWFTEWGAN--KIGRLTS--N---NI---IEEYPIQIK--SAEPHGICF-DGET-IWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp STTCEEEEETTTT--EEEEEET--T---TE---EEEEECSSS--SCCEEEEEE-CSSC-EEEEETTTEEEEEEEC-----
T ss_pred CCCCEEEeccCCc--eEEEECC--C---Cc---eEEEeCCCC--CCccceEEe-cCCC-EEEEecCCcEEEEEcCcccCC
Confidence 588887764333 4444433 1 21 222221110 012334455 6776 888765667999999988754
No 61
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.28 E-value=4.9 Score=35.63 Aligned_cols=113 Identities=13% Similarity=0.154 Sum_probs=64.8
Q ss_pred CceEECCeEEEEEeeCCCCCCcceEEEEECCCce--eEEECCCCCC------CCCeeeEEEEECCEEEEEEecCCCCeEE
Q 017755 198 NGVFIAGALHWLAARGSVRTGQNMILAFDLKSEK--FYEVQQPHGM------KGGFCSQVGVLRGCLWINSYYHDEPRCD 269 (366)
Q Consensus 198 ~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~--~~~i~~P~~~------~~~~~~~l~~~~G~L~~v~~~~~~~~l~ 269 (366)
.+++.+|.+|.....+ .+.+||.++.+ |+. +++... ...........+|.+++.... . .
T Consensus 48 ~p~v~~~~v~~~~~~g-------~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-g----~ 114 (376)
T 3q7m_A 48 HPALADNVVYAADRAG-------LVKALNADDGKEIWSV-SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-A----Q 114 (376)
T ss_dssp CCEEETTEEEEECTTS-------EEEEEETTTCCEEEEE-ECCC---CCSCCCCCEEEEEEEETTEEEEEETT-S----E
T ss_pred ccEEECCEEEEEcCCC-------eEEEEEccCCceeeee-cCccccccccccCcccccCceEeCCEEEEEcCC-C----E
Confidence 5788999998866443 79999997654 543 333211 111345566778888876542 1 3
Q ss_pred EEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 270 IWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 270 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
|..++....+..|.. .+.... ...|.. .+ +.|++...+..++.+|.+|++...-
T Consensus 115 l~a~d~~tG~~~W~~--~~~~~~-----~~~p~~--~~-~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 115 VYALNTSDGTVAWQT--KVAGEA-----LSRPVV--SD-GLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp EEEEETTTCCEEEEE--ECSSCC-----CSCCEE--ET-TEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEEECCCCCEEEEE--eCCCce-----EcCCEE--EC-CEEEEEcCCCeEEEEECCCCcEEEE
Confidence 444443223455743 222211 122222 23 4477777777799999999985443
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.21 E-value=5 Score=34.32 Aligned_cols=177 Identities=8% Similarity=-0.013 Sum_probs=89.6
Q ss_pred EEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEE
Q 017755 104 LAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWR 183 (366)
Q Consensus 104 l~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~ 183 (366)
++.....+.+.+||..+++....-... ......+.+.|.. ++ ++ ... ..-.+.+|+.+++.-.
T Consensus 156 l~~~~~dg~v~~~d~~~~~~~~~~~~~----------~~~i~~~~~~~~~-~~-l~-~~~----~dg~i~~~d~~~~~~~ 218 (337)
T 1gxr_A 156 CFSCCSDGNIAVWDLHNQTLVRQFQGH----------TDGASCIDISNDG-TK-LW-TGG----LDNTVRSWDLREGRQL 218 (337)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCC----------SSCEEEEEECTTS-SE-EE-EEE----TTSEEEEEETTTTEEE
T ss_pred EEEEeCCCcEEEEeCCCCceeeeeecc----------cCceEEEEECCCC-CE-EE-EEe----cCCcEEEEECCCCceE
Confidence 333345567888888777654321111 1112345555532 22 22 211 2345778888765422
Q ss_pred ecCCCCceeecCCCCceE--ECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEE
Q 017755 184 RTREFPYYILDDRCNGVF--IAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINS 260 (366)
Q Consensus 184 ~~~~~p~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~ 260 (366)
.....+... ..+. -+|.....+..+ ..|..+|+.+.+...+..... ....+.-. +|++.+..
T Consensus 219 ~~~~~~~~v-----~~~~~s~~~~~l~~~~~~------~~i~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~ 283 (337)
T 1gxr_A 219 QQHDFTSQI-----FSLGYCPTGEWLAVGMES------SNVEVLHVNKPDKYQLHLHES----CVLSLKFAYCGKWFVST 283 (337)
T ss_dssp EEEECSSCE-----EEEEECTTSSEEEEEETT------SCEEEEETTSSCEEEECCCSS----CEEEEEECTTSSEEEEE
T ss_pred eeecCCCce-----EEEEECCCCCEEEEEcCC------CcEEEEECCCCCeEEEcCCcc----ceeEEEECCCCCEEEEe
Confidence 211111111 1121 245555555443 368899998876544432211 12233333 46655555
Q ss_pred ecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEEC
Q 017755 261 YYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNL 325 (366)
Q Consensus 261 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl 325 (366)
.... .+.+|.++... .+....... ...-+.+.++|+.++....++.+.+||+
T Consensus 284 ~~dg--~i~~~~~~~~~------~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 284 GKDN--LLNAWRTPYGA------SIFQSKESS-----SVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp ETTS--EEEEEETTTCC------EEEEEECSS-----CEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred cCCC--cEEEEECCCCe------EEEEecCCC-----cEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 5443 79999887521 122222211 2445677888886666667777888885
No 63
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.18 E-value=3.6 Score=36.15 Aligned_cols=117 Identities=12% Similarity=0.131 Sum_probs=67.4
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEEE----CCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecC
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYEV----QQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYG 277 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i----~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~ 277 (366)
+|+..++..... ..|..||+.+.++..+ ..|.... ....+... +|+..++......+.+.+|.++..
T Consensus 221 dg~~l~v~~~~~-----~~v~v~~~~~g~~~~~~~~~~~~~~~~--~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~- 292 (361)
T 3scy_A 221 DGKFAYLINEIG-----GTVIAFRYADGMLDEIQTVAADTVNAQ--GSGDIHLSPDGKYLYASNRLKADGVAIFKVDET- 292 (361)
T ss_dssp TSSEEEEEETTT-----CEEEEEEEETTEEEEEEEEESCSSCCC--CEEEEEECTTSSEEEEEECSSSCEEEEEEECTT-
T ss_pred CCCEEEEEcCCC-----CeEEEEEecCCceEEeEEEecCCCCCC--CcccEEECCCCCEEEEECCCCCCEEEEEEEcCC-
Confidence 676444444322 3788888887776544 2232221 12233333 566444444331237999999742
Q ss_pred CCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEE--EECCCCcEEEE
Q 017755 278 SQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHW--YNLKDHKQDVI 333 (366)
Q Consensus 278 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~--ydl~t~~~~~v 333 (366)
...+..+..+.... ...-+++.++|+.+++... +..+.+ +|+++++++.+
T Consensus 293 -~g~~~~~~~~~~g~-----~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 293 -NGTLTKVGYQLTGI-----HPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp -TCCEEEEEEEECSS-----CCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred -CCcEEEeeEecCCC-----CCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 24566666665422 2334788899997777763 344444 78889988877
No 64
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.02 E-value=6.2 Score=34.94 Aligned_cols=194 Identities=9% Similarity=0.070 Sum_probs=96.1
Q ss_pred EEecccceEEeeecCceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEE
Q 017755 96 VIGCCHGLLAMFNRRLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVII 174 (366)
Q Consensus 96 ~~~s~nGLl~~~~~~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~v 174 (366)
.....+|.|.+......++.+|+.|++.+. .+...... .... .. ++ +|+.. ...-.+..
T Consensus 98 ~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~-------~~p~--~~-----~~-~v~v~-----~~~g~l~~ 157 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEAL-------SRPV--VS-----DG-LVLIH-----TSNGQLQA 157 (376)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCC-------SCCE--EE-----TT-EEEEE-----CTTSEEEE
T ss_pred CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceE-------cCCE--EE-----CC-EEEEE-----cCCCeEEE
Confidence 344567888777667789999999988542 11111110 0000 10 12 22221 12335677
Q ss_pred EEcCCC--cEEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCce--eEEE-CCCCCCCC-----C
Q 017755 175 YSLKAD--TWRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEK--FYEV-QQPHGMKG-----G 244 (366)
Q Consensus 175 yss~~~--~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~--~~~i-~~P~~~~~-----~ 244 (366)
|+..++ .|+.-...+.........++..+|.+|.-... ..+.++|+.+.+ |+.- ..|..... .
T Consensus 158 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~ 230 (376)
T 3q7m_A 158 LNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDN-------GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSD 230 (376)
T ss_dssp EETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTT-------TEEEEEETTTCCEEEEEECCC-----------C
T ss_pred EECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCC-------CEEEEEECCCCcEEEEEecccCCCCcccccccc
Confidence 787666 58765432211111112456778877664322 379999997654 4432 33322100 0
Q ss_pred eeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEE
Q 017755 245 FCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYN 324 (366)
Q Consensus 245 ~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 324 (366)
........+|.+++..... .+..+-.+. .+..|... ... ...+. .+++.|++...+..++.+|
T Consensus 231 ~~~~p~~~~~~v~~~~~~g---~l~~~d~~t--G~~~w~~~----~~~-----~~~~~---~~~~~l~~~~~~g~l~~~d 293 (376)
T 3q7m_A 231 VDTTPVVVNGVVFALAYNG---NLTALDLRS--GQIMWKRE----LGS-----VNDFI---VDGNRIYLVDQNDRVMALT 293 (376)
T ss_dssp CCCCCEEETTEEEEECTTS---CEEEEETTT--CCEEEEEC----CCC-----EEEEE---EETTEEEEEETTCCEEEEE
T ss_pred cCCCcEEECCEEEEEecCc---EEEEEECCC--CcEEeecc----CCC-----CCCce---EECCEEEEEcCCCeEEEEE
Confidence 1122234567777765321 233332222 23446532 111 12222 2355588887776799999
Q ss_pred CCCCcEEEE
Q 017755 325 LKDHKQDVI 333 (366)
Q Consensus 325 l~t~~~~~v 333 (366)
++|++...-
T Consensus 294 ~~tG~~~w~ 302 (376)
T 3q7m_A 294 IDGGVTLWT 302 (376)
T ss_dssp TTTCCEEEE
T ss_pred CCCCcEEEe
Confidence 999986543
No 65
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.97 E-value=8.5 Score=36.44 Aligned_cols=119 Identities=14% Similarity=0.147 Sum_probs=69.7
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEEC-CEEEEEEecCCCCeEEEEEEeecCC-C
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVLR-GCLWINSYYHDEPRCDIWVMKEYGS-Q 279 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~~-G~L~~v~~~~~~~~l~iW~l~~~~~-~ 279 (366)
+|...+.+.... ..|.++|+.+.+... ++.....+.+....+..-+ |.+++... ...+++.+|-.+..+. +
T Consensus 334 dg~~l~va~~~~-----~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~-~~d~~V~v~d~~~~~~~~ 407 (543)
T 1nir_A 334 SHRYFMTAANNS-----NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH-LGDGSISLIGTDPKNHPQ 407 (543)
T ss_dssp TSCEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB-SSSSEEEEEECCTTTCTT
T ss_pred CCCEEEEEecCC-----CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEecc-CCCceEEEEEeCCCCCch
Confidence 566555554432 378889999887644 3432111111112222223 56654433 2223899999875221 2
Q ss_pred CCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-------CCeEEEEECCCCcEE
Q 017755 280 QSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-------SRCLHWYNLKDHKQD 331 (366)
Q Consensus 280 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-------~~~l~~ydl~t~~~~ 331 (366)
..|..+.++....- ....+.++++|..++.... +..+.+||.+|.+..
T Consensus 408 ~~~~~v~~l~~~g~----~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 408 YAWKKVAELQGQGG----GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TBTSEEEEEECSCS----CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred hcCeEEEEEEcCCC----CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 34988888875432 1234778899997777651 346999999988754
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=91.85 E-value=5.7 Score=34.19 Aligned_cols=198 Identities=11% Similarity=-0.004 Sum_probs=100.4
Q ss_pred eEEeeecCceEEEEcC-CCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCC-
Q 017755 103 LLAMFNRRLGMSVFNP-TTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKAD- 180 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP-~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~- 180 (366)
+++.....+.+.+||. .+++...+..... ......+.+.| +++-+.+ .....+.+|+..+.
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~---------~~~v~~l~~~~--~~~l~s~------~~d~~i~iwd~~~~~ 133 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEA---------NLGICRICKYG--DDKLIAA------SWDGLIEVIDPRNYG 133 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCCC---------CSCEEEEEEET--TTEEEEE------ETTSEEEEECHHHHT
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccCC---------CCceEEEEeCC--CCEEEEE------cCCCeEEEEcccccc
Confidence 4555556788999999 8888766654211 11233456666 3333322 12345666665430
Q ss_pred --c----EEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCC-ce--eEEECCCCCCCCCeeeEEEE
Q 017755 181 --T----WRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKS-EK--FYEVQQPHGMKGGFCSQVGV 251 (366)
Q Consensus 181 --~----W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~-e~--~~~i~~P~~~~~~~~~~l~~ 251 (366)
. .+.+..+... .....+.+++.-...+..+ ..|..+|+.+ .. ......+... ....+..
T Consensus 134 ~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~---~i~~i~~ 201 (342)
T 1yfq_A 134 DGVIAVKNLNSNNTKVK---NKIFTMDTNSSRLIVGMNN------SQVQWFRLPLCEDDNGTIEESGLKY---QIRDVAL 201 (342)
T ss_dssp TBCEEEEESCSSSSSSC---CCEEEEEECSSEEEEEEST------TEEEEEESSCCTTCCCEEEECSCSS---CEEEEEE
T ss_pred cccccccCCeeeEEeeC---CceEEEEecCCcEEEEeCC------CeEEEEECCccccccceeeecCCCC---ceeEEEE
Confidence 0 2222222210 0111333444333333333 3799999987 32 3333333222 1233333
Q ss_pred E--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCC--CC---cceeEEEEEEeCCCeEEEEEcCCeEEEEE
Q 017755 252 L--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLH--ET---CYYTEAFAFSKDGDKALIYQHSRCLHWYN 324 (366)
Q Consensus 252 ~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~--~~---~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 324 (366)
. +|++.++..... .+.+|.++..+..........+..... .+ .....-+.+.++|+.++....++.+.+||
T Consensus 202 ~~~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 202 LPKEQEGYACSSIDG--RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp CSGGGCEEEEEETTS--EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred CCCCCCEEEEEecCC--cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 3 466655555444 799999986411111112222222111 00 00345577888888676666777799999
Q ss_pred CCCCcEE
Q 017755 325 LKDHKQD 331 (366)
Q Consensus 325 l~t~~~~ 331 (366)
+++++..
T Consensus 280 ~~~~~~~ 286 (342)
T 1yfq_A 280 LQTRKKI 286 (342)
T ss_dssp TTTTEEE
T ss_pred CccHhHh
Confidence 9988753
No 67
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=91.78 E-value=5.9 Score=34.26 Aligned_cols=208 Identities=10% Similarity=-0.012 Sum_probs=104.5
Q ss_pred EEecccceEEeee-cCceEEEEcCCCcceE-ecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEE
Q 017755 96 VIGCCHGLLAMFN-RRLGMSVFNPTTKKFK-LFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVI 173 (366)
Q Consensus 96 ~~~s~nGLl~~~~-~~~~~~V~NP~t~~~~-~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 173 (366)
.++..++.+.+.+ ....+.++|+.+++.. .++...... ..... ......+.++|..+. ++. ... .....+.
T Consensus 95 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~s~dg~~--l~~-~~~--~~~~~i~ 167 (353)
T 3vgz_A 95 TINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR-TEEVR-PLQPRELVADDATNT--VYI-SGI--GKESVIW 167 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCC-CSSCC-CCEEEEEEEETTTTE--EEE-EEE--SSSCEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcc-ccccC-CCCCceEEECCCCCE--EEE-Eec--CCCceEE
Confidence 3444445454443 4578999999998864 333321110 00000 122445777775442 222 111 1244577
Q ss_pred EEEcCCCcEEe-cCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEE
Q 017755 174 IYSLKADTWRR-TREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGV 251 (366)
Q Consensus 174 vyss~~~~W~~-~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~ 251 (366)
+++..++.=.. +...... ...-.+.-+|...++...+ ..|..+|+.+.+.. .+..+..........+..
T Consensus 168 ~~d~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKM---STGLALDSEGKRLYTTNAD------GELITIDTADNKILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp EEETTTTEEEEEECCCCTT---CCCCEEETTTTEEEEECTT------SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEE
T ss_pred EEcCCCCceEEEecCCCCc---cceEEECCCCCEEEEEcCC------CeEEEEECCCCeEEEEEEcCCCCCCcccceEEE
Confidence 88887663221 2101000 0101233366644444433 37889999987764 345433211111223333
Q ss_pred E-CC-EEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEECCCC
Q 017755 252 L-RG-CLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNLKDH 328 (366)
Q Consensus 252 ~-~G-~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t~ 328 (366)
. +| .|++...... .+.+|-++. .+- +..+....- .-+.+.++|+.+++... +..+.+||++++
T Consensus 239 s~dg~~l~~~~~~~~--~v~~~d~~~----~~~--~~~~~~~~~------~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 239 DTARQRAFITDSKAA--EVLVVDTRN----GNI--LAKVAAPES------LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp ETTTTEEEEEESSSS--EEEEEETTT----CCE--EEEEECSSC------CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred CCCCCEEEEEeCCCC--EEEEEECCC----CcE--EEEEEcCCC------ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 3 34 5655543322 677775543 222 333332221 12677889987777763 567999999998
Q ss_pred cEEEE
Q 017755 329 KQDVI 333 (366)
Q Consensus 329 ~~~~v 333 (366)
+....
T Consensus 305 ~~~~~ 309 (353)
T 3vgz_A 305 KVVKT 309 (353)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 76443
No 68
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.73 E-value=6 Score=34.17 Aligned_cols=209 Identities=10% Similarity=0.045 Sum_probs=100.8
Q ss_pred cccceEEee-ecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEc
Q 017755 99 CCHGLLAMF-NRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSL 177 (366)
Q Consensus 99 s~nGLl~~~-~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss 177 (366)
+.+|-+.+. .....++++||.+++...+...... ...++.+++.. +++............+.+|+.
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----------~~~~i~~~~dg---~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKA----------NPAAIKIHKDG---RLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSS----------SEEEEEECTTS---CEEEEECTTSSSCCEEEEECT
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCC----------CcceEEECCCC---cEEEEeCCCCCCCceEEEEeC
Confidence 345655543 3456899999999987665321111 13356667653 222221110011135677777
Q ss_pred CCCcEEe-cCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-C
Q 017755 178 KADTWRR-TREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-R 253 (366)
Q Consensus 178 ~~~~W~~-~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~ 253 (366)
.++.-+. +...... .....+.+ +|.+|..............|..+|..+.++..+..... ....+... +
T Consensus 120 ~~~~~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~i~~~~d 192 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTA---YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS----VANGIALSTD 192 (333)
T ss_dssp TSCSCEEEECSSSSC---CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES----SEEEEEECTT
T ss_pred CCCEEEEEEccCccC---CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC----cccceEECCC
Confidence 7765442 2211110 00112222 57766644321100112478999998776655421100 11223332 4
Q ss_pred CE-EEEEEecCCCCeEEEEEEeecCCCCCeeEEE-E--ecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEECCCC
Q 017755 254 GC-LWINSYYHDEPRCDIWVMKEYGSQQSWSKLC-S--FSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNLKDH 328 (366)
Q Consensus 254 G~-L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~-~--i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t~ 328 (366)
|+ |++...... .+.+|.++..+ ....... . ..... .....-+++.++|. +++... ...+..||++.+
T Consensus 193 g~~l~v~~~~~~--~i~~~d~~~~g--~~~~~~~~~~~~~~~~---~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 193 EKVLWVTETTAN--RLHRIALEDDG--VTIQPFGATIPYYFTG---HEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp SSEEEEEEGGGT--EEEEEEECTTS--SSEEEEEEEEEEECCS---SSEEEEEEEBTTCC-EEEEEETTTEEEEECTTSC
T ss_pred CCEEEEEeCCCC--eEEEEEecCCC--cCcccccceEEEecCC---CCCCCceEECCCCC-EEEEEcCCCEEEEECCCCC
Confidence 54 666654333 56666664321 2222111 1 11111 01234467777887 777653 456999999776
Q ss_pred cEEEEEE
Q 017755 329 KQDVIEI 335 (366)
Q Consensus 329 ~~~~v~~ 335 (366)
..+.+..
T Consensus 265 ~~~~~~~ 271 (333)
T 2dg1_A 265 PIGQILI 271 (333)
T ss_dssp EEEEEEC
T ss_pred EEEEEEc
Confidence 6666644
No 69
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=91.41 E-value=6.2 Score=33.76 Aligned_cols=98 Identities=10% Similarity=0.039 Sum_probs=55.3
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCccee
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYT 299 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 299 (366)
.|..+|+.+.+...+..+.... ....+... +|+..++. . +.+.+|-++. ...+..+..... .
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~--~--~~v~~~d~~~------~~~~~~~~~~~~-----~ 282 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDV--FYFSTAVNPAKTRAFGA--Y--NVLESFDLEK------NASIKRVPLPHS-----Y 282 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSS--CEEEEEECTTSSEEEEE--E--SEEEEEETTT------TEEEEEEECSSC-----C
T ss_pred ceEEEeCCCCCceEeecCCCCC--ceeeEEECCCCCEEEEe--C--CeEEEEECCC------CcCcceecCCCc-----e
Confidence 5889999988765443332211 11122222 34433333 1 2677776543 223344443221 3
Q ss_pred EEEEEEeCCCeEEEEEcCCeEEEEECCCCcE-EEEEE
Q 017755 300 EAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ-DVIEI 335 (366)
Q Consensus 300 ~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~-~~v~~ 335 (366)
.-+++.++|+.+++...+..+.+||+++++. ..+..
T Consensus 283 ~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp CEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred eeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 3467888999788776666799999999875 33444
No 70
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.29 E-value=3.3 Score=36.10 Aligned_cols=104 Identities=12% Similarity=0.079 Sum_probs=60.2
Q ss_pred ceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcce
Q 017755 220 NMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYY 298 (366)
Q Consensus 220 ~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 298 (366)
..+..+|..+.+++.+........ -..++.. +|+|+++........+.+|.++. .++..+..+....- .
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~--p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~----g~~~~~~~~~~~~~----~ 87 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQN--PTYLALSAKDCLYSVDKEDDEGGIAAWQIDG----QTAHKLNTVVAPGT----P 87 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSC--CCCEEECTTCEEEEEEEETTEEEEEEEEEET----TEEEEEEEEEEESC----C
T ss_pred EEEEEEcCCCCeEEEeeeeeccCC--cceEEEccCCeEEEEEecCCCceEEEEEecC----CcEEEeeeeecCCC----C
Confidence 578888888888876532211111 1123323 68877666532223688888853 34555444321111 2
Q ss_pred eEEEEEEeCCCeEEEEE-cCCeEEEEECC-CCcEEEE
Q 017755 299 TEAFAFSKDGDKALIYQ-HSRCLHWYNLK-DHKQDVI 333 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~-~~~~l~~ydl~-t~~~~~v 333 (366)
..-+++.++|+.+++.. .+..+.+||++ +++.+.+
T Consensus 88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 33478889999777776 44569999984 5566555
No 71
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=90.95 E-value=7 Score=33.54 Aligned_cols=201 Identities=9% Similarity=0.079 Sum_probs=98.1
Q ss_pred EEecccc-eEEeee-cCceEEEEcCCCcce-E-ecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeE
Q 017755 96 VIGCCHG-LLAMFN-RRLGMSVFNPTTKKF-K-LFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLE 171 (366)
Q Consensus 96 ~~~s~nG-Ll~~~~-~~~~~~V~NP~t~~~-~-~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 171 (366)
+.-+-+| .+.... ....++++|+.+++. . .++..... ..++.++|.. ++ ++ .. ........
T Consensus 45 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-----------~~~~~~s~dg-~~-l~-~~-~~~~~~~~ 109 (331)
T 3u4y_A 45 TAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS-----------MADVDITPDD-QF-AV-TV-TGLNHPFN 109 (331)
T ss_dssp EEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC-----------CCCEEECTTS-SE-EE-EC-CCSSSSCE
T ss_pred EEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC-----------ccceEECCCC-CE-EE-Ee-cCCCCccc
Confidence 3334444 344443 366899999999885 2 22221111 1124555542 22 22 21 11112237
Q ss_pred EEEEEcCCCcEEecCCCCceeecCCCCceEECCe-EEEEEeeCCCCCCcce-EEEEECCCce-eE---EECCCCCCCCCe
Q 017755 172 VIIYSLKADTWRRTREFPYYILDDRCNGVFIAGA-LHWLAARGSVRTGQNM-ILAFDLKSEK-FY---EVQQPHGMKGGF 245 (366)
Q Consensus 172 ~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~-i~~fD~~~e~-~~---~i~~P~~~~~~~ 245 (366)
+.+|+..++.-........... .-.+.-+|. +|...... .. |..||+.... .. ...++... .
T Consensus 110 i~v~d~~~~~~~~~~~~~~~~~---~~~~spdg~~l~~~~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~---~ 177 (331)
T 3u4y_A 110 MQSYSFLKNKFISTIPIPYDAV---GIAISPNGNGLILIDRSS------ANTVRRFKIDADGVLFDTGQEFISGGT---R 177 (331)
T ss_dssp EEEEETTTTEEEEEEECCTTEE---EEEECTTSSCEEEEEETT------TTEEEEEEECTTCCEEEEEEEEECSSS---S
T ss_pred EEEEECCCCCeEEEEECCCCcc---ceEECCCCCEEEEEecCC------CceEEEEEECCCCcEeecCCccccCCC---C
Confidence 8888988775433211111110 001223565 44443332 24 6666665321 11 11112221 1
Q ss_pred eeEEEEE-CCE-EEEEEecCCCCeEEEEEEeecCCCCCe-eEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEE
Q 017755 246 CSQVGVL-RGC-LWINSYYHDEPRCDIWVMKEYGSQQSW-SKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLH 321 (366)
Q Consensus 246 ~~~l~~~-~G~-L~~v~~~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~ 321 (366)
-..+... +|+ |++...... .+.+|-++.. +. ..+..+..... ..-+++.++|+.+++... +..+.
T Consensus 178 ~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~~----~~~~~~~~~~~~~~-----~~~~~~spdg~~l~v~~~~~~~i~ 246 (331)
T 3u4y_A 178 PFNITFTPDGNFAFVANLIGN--SIGILETQNP----ENITLLNAVGTNNL-----PGTIVVSRDGSTVYVLTESTVDVF 246 (331)
T ss_dssp EEEEEECTTSSEEEEEETTTT--EEEEEECSST----TSCEEEEEEECSSC-----CCCEEECTTSSEEEEECSSEEEEE
T ss_pred ccceEECCCCCEEEEEeCCCC--eEEEEECCCC----cccceeeeccCCCC-----CceEEECCCCCEEEEEEcCCCEEE
Confidence 2223333 465 555544333 7889987642 12 12444443322 334778899997777654 33599
Q ss_pred EEECCCCcEEEEE
Q 017755 322 WYNLKDHKQDVIE 334 (366)
Q Consensus 322 ~ydl~t~~~~~v~ 334 (366)
+||+++++++.+.
T Consensus 247 ~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 247 NFNQLSGTLSFVK 259 (331)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEECCCCceeeec
Confidence 9999999987774
No 72
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=90.67 E-value=7.7 Score=33.55 Aligned_cols=70 Identities=9% Similarity=0.001 Sum_probs=43.7
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
+|++.++..... .+.+|-+... ...+..+....- ...-+.+.++|..++....++.+.+||+++++...
T Consensus 186 ~~~~l~~~~~dg--~i~i~d~~~~-----~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 186 KGKYIIAGHKDG--KISKYDVSNN-----YEYVDSIDLHEK----SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp GGCEEEEEETTS--EEEEEETTTT-----TEEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEcCCC--EEEEEECCCC-----cEeEEEEecCCC----ceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 355544444433 7899987641 223333332211 24557788899877777777789999999987654
Q ss_pred E
Q 017755 333 I 333 (366)
Q Consensus 333 v 333 (366)
.
T Consensus 255 ~ 255 (369)
T 3zwl_B 255 K 255 (369)
T ss_dssp E
T ss_pred e
Confidence 4
No 73
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=90.37 E-value=10 Score=34.34 Aligned_cols=116 Identities=9% Similarity=0.085 Sum_probs=55.3
Q ss_pred ceEECCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecC
Q 017755 199 GVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYG 277 (366)
Q Consensus 199 ~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~ 277 (366)
.+..+|.....+..+ ..|..+|+.+.+.. .+..... ....+ ..+|...+.....+ .+.+|-+....
T Consensus 301 ~~~~~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~h~~----~v~~~-~~~~~~l~sg~~dg--~i~vwd~~~~~ 367 (435)
T 1p22_A 301 CLQYRDRLVVSGSSD------NTIRLWDIECGACLRVLEGHEE----LVRCI-RFDNKRIVSGAYDG--KIKVWDLVAAL 367 (435)
T ss_dssp EEEEETTEEEEEETT------SCEEEEETTTCCEEEEECCCSS----CEEEE-ECCSSEEEEEETTS--CEEEEEHHHHT
T ss_pred EEEeCCCEEEEEeCC------CeEEEEECCCCCEEEEEeCCcC----cEEEE-EecCCEEEEEeCCC--cEEEEECCCCC
Confidence 344566665555544 37999999876543 3332111 12222 23666655555444 79999986532
Q ss_pred C---CCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 278 S---QQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 278 ~---~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
. ......+..+....- ...-+.+ +|..++....++.+.+||+.++.....
T Consensus 368 ~~~~~~~~~~~~~~~~h~~----~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 368 DPRAPAGTLCLRTLVEHSG----RVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp STTSCTTTTEEEEECCCSS----CCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred CccccccchheeeccCCCC----CeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 1 111222333322111 1111233 666555555677799999988765443
No 74
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=90.21 E-value=8.5 Score=33.30 Aligned_cols=183 Identities=10% Similarity=0.058 Sum_probs=93.5
Q ss_pred eecCceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEe-
Q 017755 107 FNRRLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRR- 184 (366)
Q Consensus 107 ~~~~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~- 184 (366)
...++.+.+||..+++... +...+.. ...+.+.|.. ++ ++.. ...-.+.+|+.+++.-..
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~-----------~~~~~~spdg-~~--l~~g----~~dg~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGPVD-----------AWTLAFSPDS-QY--LATG----THVGKVNIFGVESGKKEYS 159 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTC-----------CCCEEECTTS-SE--EEEE----CTTSEEEEEETTTCSEEEE
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCCcc-----------EEEEEECCCC-CE--EEEE----cCCCcEEEEEcCCCceeEE
Confidence 3457789999998887543 3222111 1134555532 22 2221 233456777776653221
Q ss_pred cCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCEEEEEEec
Q 017755 185 TREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGCLWINSYY 262 (366)
Q Consensus 185 ~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~ 262 (366)
+..-...... -...-+|.....+..+ ..|..+|+.+.+.. .+...... -..+.-. +|++.+....
T Consensus 160 ~~~~~~~v~~---~~~spdg~~lasg~~d------g~i~iwd~~~~~~~~~~~~h~~~----v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 160 LDTRGKFILS---IAYSPDGKYLASGAID------GIINIFDIATGKLLHTLEGHAMP----IRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp EECSSSCEEE---EEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCSSC----CCEEEECTTSCEEEEECT
T ss_pred ecCCCceEEE---EEECCCCCEEEEEcCC------CeEEEEECCCCcEEEEEcccCCc----eeEEEEcCCCCEEEEEcC
Confidence 1100000000 0111245544444443 37889999887653 33322211 1223322 4665544443
Q ss_pred CCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 263 HDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 263 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
.. .+.||-++.. .....+....- ...-+++.++|..++-...++.+.+||+++++...
T Consensus 227 dg--~i~iwd~~~~------~~~~~~~~h~~----~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 227 DG--YIKIYDVQHA------NLAGTLSGHAS----WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp TS--CEEEEETTTC------CEEEEECCCSS----CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CC--eEEEEECCCc------ceeEEEcCCCC----ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 33 7999987642 12333322111 34557888899866666677779999999887543
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=90.20 E-value=8.4 Score=33.22 Aligned_cols=186 Identities=10% Similarity=0.068 Sum_probs=92.9
Q ss_pred CceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCC--CCeeEEEEEEecccceeEEEEEEcCCCc--EEec
Q 017755 110 RLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDAST--DDYKLVRIIQSYKVDYLEVIIYSLKADT--WRRT 185 (366)
Q Consensus 110 ~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~--~~ykVv~~~~~~~~~~~~~~vyss~~~~--W~~~ 185 (366)
.+.+.|||..+++...+...... .....+.+.|.. +.+-+.+ . ..-.+.+|+..++. -+.+
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~l~~~--~----~dg~i~iwd~~~~~~~~~~~ 107 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKA---------KPIKCGTFGATSLQQRYLATG--D----FGGNLHIWNLEAPEMPVYSV 107 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEES---------SCEEEEECTTCCTTTCCEEEE--E----TTSCEEEECTTSCSSCSEEE
T ss_pred CcEEEEEeCCCCcccceeeeccc---------CcEEEEEEcCCCCCCceEEEe--c----CCCeEEEEeCCCCCccEEEE
Confidence 56788999888876543222111 123345666653 3333332 1 23457777776653 1111
Q ss_pred CCCCc---eeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCce--eEEECCCCCCCCCeeeEEE-----EECCE
Q 017755 186 REFPY---YILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEK--FYEVQQPHGMKGGFCSQVG-----VLRGC 255 (366)
Q Consensus 186 ~~~p~---~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~--~~~i~~P~~~~~~~~~~l~-----~~~G~ 255 (366)
..-.. .......-...-+|.....+..+ ..|..+|+.+.+ ...+..+..........+. .-+|.
T Consensus 108 ~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 181 (357)
T 3i2n_A 108 KGHKEIINAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER 181 (357)
T ss_dssp CCCSSCEEEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC
T ss_pred EecccceEEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCC
Confidence 11000 00000000112345544444443 378999998764 4555443332111122222 13566
Q ss_pred EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEe---CCCeEEEEEcCCeEEEEECCCCc
Q 017755 256 LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSK---DGDKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 256 L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~---~g~~i~l~~~~~~l~~ydl~t~~ 329 (366)
+.++..... .+.+|-++.. . ......... ...-+.+.+ +++.++....++.+.+||+++++
T Consensus 182 ~l~~~~~d~--~i~i~d~~~~---~---~~~~~~~~~-----~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 182 VVCAGYDNG--DIKLFDLRNM---A---LRWETNIKN-----GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEEEETTS--EEEEEETTTT---E---EEEEEECSS-----CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred EEEEEccCC--eEEEEECccC---c---eeeecCCCC-----ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 665555444 7999988742 1 122222221 245567777 78867777777779999987654
No 76
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=89.96 E-value=9.6 Score=33.54 Aligned_cols=190 Identities=9% Similarity=-0.004 Sum_probs=89.6
Q ss_pred cccceEEe-eecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEc
Q 017755 99 CCHGLLAM-FNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSL 177 (366)
Q Consensus 99 s~nGLl~~-~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss 177 (366)
+.+|-.++ ....+.+.+||..+++....-.... .....+.+.+..+.+ ++... ..-.+.+|+.
T Consensus 148 spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~----------~~v~~v~~s~~~~~~-~~s~~-----~dg~v~~wd~ 211 (357)
T 4g56_B 148 FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS----------SEVNCVAACPGKDTI-FLSCG-----EDGRILLWDT 211 (357)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS----------SCEEEEEECTTCSSC-EEEEE-----TTSCEEECCT
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC----------CCEEEEEEccCCCce-eeeec-----cCCceEEEEC
Confidence 44565443 3456789999999988654322111 112234555543333 22221 2234667777
Q ss_pred CCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCeeeEEEEE-
Q 017755 178 KADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFCSQVGVL- 252 (366)
Q Consensus 178 ~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~l~~~- 252 (366)
+++.-.......... .....+.+ ++.+...+..+ ..|..+|+.+.+- ..+..... ....+.-.
T Consensus 212 ~~~~~~~~~~~~~~~--~~v~~v~~sp~~~~~la~g~~d------~~i~~wd~~~~~~~~~~~~~~~----~v~~l~~sp 279 (357)
T 4g56_B 212 RKPKPATRIDFCASD--TIPTSVTWHPEKDDTFACGDET------GNVSLVNIKNPDSAQTSAVHSQ----NITGLAYSY 279 (357)
T ss_dssp TSSSCBCBCCCTTCC--SCEEEEEECTTSTTEEEEEESS------SCEEEEESSCGGGCEEECCCSS----CEEEEEECS
T ss_pred CCCceeeeeeecccc--ccccchhhhhcccceEEEeecc------cceeEEECCCCcEeEEEeccce----eEEEEEEcC
Confidence 665322211110000 00012322 23343333333 3688899987654 22333222 12233322
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEe-CCCeEEEEEcCCeEEEEECCCC
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSK-DGDKALIYQHSRCLHWYNLKDH 328 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~-~g~~i~l~~~~~~l~~ydl~t~ 328 (366)
+|.-+++....+. .+.||-++. -..+..+.... ...-+++.+ ++..++-...++.+.+||+.++
T Consensus 280 ~~~~~lasgs~D~-~i~iwd~~~------~~~~~~~~H~~-----~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 280 HSSPFLASISEDC-TVAVLDADF------SEVFRDLSHRD-----FVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSSCCEEEEETTS-CEEEECTTS------CEEEEECCCSS-----CEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCCEEEEEeCCC-EEEEEECCC------CcEeEECCCCC-----CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 3432333333332 799996653 12233332222 345577786 6774444556777999998664
No 77
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=89.85 E-value=11 Score=34.05 Aligned_cols=186 Identities=12% Similarity=0.075 Sum_probs=98.2
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCCc
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFPY 190 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~ 190 (366)
..+.+||..+++...+..... ....+.+.|..+ +++... . +.....+.+++..+++.+.+...+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~-----------~v~~~~~Spdg~--~la~~s-~-~~~~~~i~~~d~~tg~~~~l~~~~~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ-----------PLMSPAWSPDGS--KLAYVT-F-ESGRSALVIQTLANGAVRQVASFPR 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS-----------CEEEEEECTTSS--EEEEEE-C-TTSSCEEEEEETTTCCEEEEECCSS
T ss_pred ceEEEEcCCCCCCEEEeCCCC-----------cceeeEEcCCCC--EEEEEE-e-cCCCcEEEEEECCCCcEEEeecCCC
Confidence 588999987766555533211 122455555432 222222 1 1234678899998887766543221
Q ss_pred eeecCCCCceEECCe-EEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCE-EEEEEecCCCCe
Q 017755 191 YILDDRCNGVFIAGA-LHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGC-LWINSYYHDEPR 267 (366)
Q Consensus 191 ~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~-L~~v~~~~~~~~ 267 (366)
.... ....-+|. +.+....+. ...|..+|+.+.+...+..... ....+.-. +|+ |++...... .
T Consensus 224 ~~~~---~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdg~~l~~~s~~~g--~ 290 (415)
T 2hqs_A 224 HNGA---PAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDGRS----NNTEPTWFPDSQNLAFTSDQAG--R 290 (415)
T ss_dssp CEEE---EEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCCSS----CEEEEEECTTSSEEEEEECTTS--S
T ss_pred cccC---EEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCCCC----cccceEECCCCCEEEEEECCCC--C
Confidence 1100 01122565 444443322 1369999999887655432111 12222222 465 444443233 4
Q ss_pred EEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC---CeEEEEECCCCcEEEE
Q 017755 268 CDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS---RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 268 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~---~~l~~ydl~t~~~~~v 333 (366)
..||.++-.+ .. ...+.... ....-+.+.++|+.|++...+ ..+..+|+++++.+.+
T Consensus 291 ~~i~~~d~~~--~~---~~~l~~~~----~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 291 PQVYKVNING--GA---PQRITWEG----SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp CEEEEEETTS--SC---CEECCCSS----SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred cEEEEEECCC--CC---EEEEecCC----CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 6777776432 11 12222111 134456788999977776653 3599999999988655
No 78
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=88.65 E-value=0.8 Score=40.62 Aligned_cols=142 Identities=7% Similarity=-0.024 Sum_probs=69.2
Q ss_pred eEEEEEEcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCce-eEEE-CCCCCCCCCe
Q 017755 170 LEVIIYSLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEK-FYEV-QQPHGMKGGF 245 (366)
Q Consensus 170 ~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~-~~~i-~~P~~~~~~~ 245 (366)
-.+.+|+..++.|+.+..+....... ..+.+ +|.+...+..+ ..|..+|+.+.+ +... .+..+. ..
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~~v--~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~~~~~~--~~ 102 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDKIV--TCVDWAPKSNRIVTCSQD------RNAYVYEKRPDGTWKQTLVLLRLN--RA 102 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSSCE--EEEEECTTTCCEEEEETT------SSEEEC------CCCCEEECCCCS--SC
T ss_pred CEEEEEEccCCceEEEEEEecCCceE--EEEEEeCCCCEEEEEeCC------CeEEEEEcCCCCceeeeeEecccC--Cc
Confidence 35667778788787765443211000 11222 34444444333 368888988776 3222 221111 11
Q ss_pred eeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEE
Q 017755 246 CSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYN 324 (366)
Q Consensus 246 ~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 324 (366)
...+.-. +|++.+...... .+.+|.++.. ..|.....+....- . ...-+.+.++|..++....++.+.+||
T Consensus 103 v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~---~~~~~~~~~~~~h~-~--~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGAR--VISVCYFEQE---NDWWVSKHLKRPLR-S--TILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp EEEEECCTTSSCCEEEESSS--CEEECCC--------CCCCEEECSSCC-S--CEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred eEEEEECCCCCEEEEEecCC--eEEEEEECCc---ccceeeeEeecccC-C--CeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 2222222 455545444434 6999998852 34655555543111 0 355677888888666666777799999
Q ss_pred CCCCc
Q 017755 325 LKDHK 329 (366)
Q Consensus 325 l~t~~ 329 (366)
++++.
T Consensus 175 ~~~~~ 179 (377)
T 3dwl_C 175 AYVRD 179 (377)
T ss_dssp ECCSS
T ss_pred EEecc
Confidence 86543
No 79
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=88.32 E-value=11 Score=32.09 Aligned_cols=68 Identities=12% Similarity=0.040 Sum_probs=41.7
Q ss_pred CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 254 GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 254 G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
+.+.+...... .+.||-++. ...+..+....- ...-+.+.+++..++-...++.+.+||+++++....
T Consensus 198 ~~~l~s~s~D~--~i~iWd~~~------~~~~~~~~~h~~----~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 198 KPYMITASDDL--TIKIWDYQT------KSCVATLEGHMS----NVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp CCEEEEEETTS--EEEEEETTT------TEEEEEEECCSS----CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCC--eEEEEeCCC------CccceeeCCCCC----CEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 44444444333 799998764 123333332111 355577888888555556677799999999886554
No 80
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=88.29 E-value=14 Score=33.10 Aligned_cols=187 Identities=12% Similarity=0.009 Sum_probs=93.2
Q ss_pred ceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecc--cceeEEEEEEcC
Q 017755 102 GLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYK--VDYLEVIIYSLK 178 (366)
Q Consensus 102 GLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~--~~~~~~~vyss~ 178 (366)
..+++.. ..+.+.+||+.+++....-+.. . ....+.++|..+ +-++.-..... ...-.+.+|+..
T Consensus 224 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~----------~-~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 224 DLVYCSNWISEDISVIDRKTKLEIRKTDKI----------G-LPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEECCCC----------S-EEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETT
T ss_pred CEEEEEecCCCcEEEEECCCCcEEEEecCC----------C-CceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECC
Confidence 3343333 4568889998888765432221 1 133566666432 22222211110 023477888988
Q ss_pred CCcEEecCCCCceeecCCCCceE--ECCe-EEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-C
Q 017755 179 ADTWRRTREFPYYILDDRCNGVF--IAGA-LHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-R 253 (366)
Q Consensus 179 ~~~W~~~~~~p~~~~~~~~~~v~--~~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~ 253 (366)
++.-......+... ..+. -+|. +|.....+ ..|..+|+.+.+.. .++.... ...+... +
T Consensus 292 ~~~~~~~~~~~~~~-----~~~~~~~~g~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~~~-----~~~~~~s~d 355 (433)
T 3bws_A 292 KEKLIDTIGPPGNK-----RHIVSGNTENKIYVSDMCC------SKIEVYDLKEKKVQKSIPVFDK-----PNTIALSPD 355 (433)
T ss_dssp TTEEEEEEEEEECE-----EEEEECSSTTEEEEEETTT------TEEEEEETTTTEEEEEEECSSS-----EEEEEECTT
T ss_pred CCcEEeeccCCCCc-----ceEEECCCCCEEEEEecCC------CEEEEEECCCCcEEEEecCCCC-----CCeEEEcCC
Confidence 76433221111000 1222 2454 44443333 48999999876543 2332111 2233333 3
Q ss_pred CE-EEEEEecCC------------CCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCe
Q 017755 254 GC-LWINSYYHD------------EPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRC 319 (366)
Q Consensus 254 G~-L~~v~~~~~------------~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~ 319 (366)
|+ |++...... .+.+.+|-++. ...+..+.... ...-+++.++|+.++.... +..
T Consensus 356 g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~------~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~d~~ 424 (433)
T 3bws_A 356 GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT------DTVKEFWEAGN-----QPTGLDVSPDNRYLVISDFLDHQ 424 (433)
T ss_dssp SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT------TEEEEEEECSS-----SEEEEEECTTSCEEEEEETTTTE
T ss_pred CCEEEEEecCCCccccccccccccceEEEEEECCC------CcEEEEecCCC-----CCceEEEcCCCCEEEEEECCCCe
Confidence 54 544443322 12677776543 23344444322 2455778889987776664 667
Q ss_pred EEEEECCC
Q 017755 320 LHWYNLKD 327 (366)
Q Consensus 320 l~~ydl~t 327 (366)
+.+||++.
T Consensus 425 i~v~~~~~ 432 (433)
T 3bws_A 425 IRVYRRDG 432 (433)
T ss_dssp EEEEEETT
T ss_pred EEEEEecC
Confidence 99998753
No 81
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=88.27 E-value=8.8 Score=34.76 Aligned_cols=200 Identities=9% Similarity=0.086 Sum_probs=94.1
Q ss_pred ceEEeeecCceEEEEcCCCcce---EecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 102 GLLAMFNRRLGMSVFNPTTKKF---KLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 102 GLl~~~~~~~~~~V~NP~t~~~---~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
++|+.....+.+.+||..++.. ..-+...... + ......+.+.|..+.+-+.+ ...-.+.+|+.+
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h-----~~~v~~v~~~p~~~~~l~s~------~~dg~i~i~d~~ 262 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG-H-----TAVVEDVAWHLLHESLFGSV------ADDQKLMIWDTR 262 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC-C-----SSCEEEEEECSSCTTEEEEE------ETTSEEEEEETT
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC-C-----CCCEeeeEEeCCCCCEEEEE------eCCCeEEEEECC
Confidence 3565555677899999887321 1111111100 1 11233566666433332222 134568888887
Q ss_pred CCc-EEecCCCCceeecCCCCceEE--CCe-EEEEEeeCCCCCCcceEEEEECCCce--eEEECCCCCCCCCeeeEEEEE
Q 017755 179 ADT-WRRTREFPYYILDDRCNGVFI--AGA-LHWLAARGSVRTGQNMILAFDLKSEK--FYEVQQPHGMKGGFCSQVGVL 252 (366)
Q Consensus 179 ~~~-W~~~~~~p~~~~~~~~~~v~~--~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~--~~~i~~P~~~~~~~~~~l~~~ 252 (366)
++. .+.+..+... ...-..+.+ +|. ++..+..+ ..|..+|+.+.. ...+..... ....+.-.
T Consensus 263 ~~~~~~~~~~~~~~--~~~v~~i~~~p~~~~~l~tg~~d------g~v~vwd~~~~~~~~~~~~~h~~----~v~~i~~s 330 (430)
T 2xyi_A 263 NNNTSKPSHTVDAH--TAEVNCLSFNPYSEFILATGSAD------KTVALWDLRNLKLKLHSFESHKD----EIFQVQWS 330 (430)
T ss_dssp CSCSSSCSEEEECC--SSCEEEEEECSSCTTEEEEEETT------SEEEEEETTCTTSCSEEEECCSS----CEEEEEEC
T ss_pred CCCCCcceeEeecC--CCCeEEEEeCCCCCCEEEEEeCC------CeEEEEeCCCCCCCeEEeecCCC----CEEEEEEC
Confidence 642 1111110000 000012223 243 44444444 379999998632 233322111 12223322
Q ss_pred -CC-EEEEEEecCCCCeEEEEEEeecCCCCC--------eeEEEEecCCCCCCcceeEEEEEEeCCC-eEEEEEcCCeEE
Q 017755 253 -RG-CLWINSYYHDEPRCDIWVMKEYGSQQS--------WSKLCSFSKMLHETCYYTEAFAFSKDGD-KALIYQHSRCLH 321 (366)
Q Consensus 253 -~G-~L~~v~~~~~~~~l~iW~l~~~~~~~~--------W~~~~~i~~~~~~~~~~~~~~~~~~~g~-~i~l~~~~~~l~ 321 (366)
+| .+.+...... .+.||-+...+.... -..+.......- ...-+.+.+++. .++-...++.+.
T Consensus 331 p~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~----~v~~~~~~p~~~~~l~s~s~dg~i~ 404 (430)
T 2xyi_A 331 PHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA----KISDFSWNPNEPWIICSVSEDNIMQ 404 (430)
T ss_dssp SSCTTEEEEEETTS--CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSS----CEEEEEECSSSTTEEEEEETTSEEE
T ss_pred CCCCCEEEEEeCCC--cEEEEeCCCCccccCccccccCCcceEEEcCCCCC----CceEEEECCCCCCEEEEEECCCCEE
Confidence 24 4555554444 799999876321100 112222211110 355577888887 444555666799
Q ss_pred EEECCCCcEE
Q 017755 322 WYNLKDHKQD 331 (366)
Q Consensus 322 ~ydl~t~~~~ 331 (366)
+|++.++.+.
T Consensus 405 iw~~~~~~~~ 414 (430)
T 2xyi_A 405 VWQMAENVYN 414 (430)
T ss_dssp EEEECHHHHC
T ss_pred EeEccccccc
Confidence 9999776554
No 82
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=88.25 E-value=13 Score=32.71 Aligned_cols=110 Identities=7% Similarity=-0.018 Sum_probs=56.1
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCC---CCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCC
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGM---KGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGS 278 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~---~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~ 278 (366)
+|.....+..+ ..|..+|+.+.+-......... ........... .+.+.+... .. .+.+|-+..
T Consensus 256 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~i~v~d~~~--- 323 (408)
T 4a11_B 256 DGLHLLTVGTD------NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY-GS--TIAVYTVYS--- 323 (408)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE-TT--EEEEEETTT---
T ss_pred CCCEEEEecCC------CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec-CC--EEEEEECcC---
Confidence 45544444443 3799999987654322111111 01111111111 233333333 33 788888764
Q ss_pred CCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEE
Q 017755 279 QQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 279 ~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
...+..+....- ...-+++.++|..++....++.+.+||+++++..
T Consensus 324 ---~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 324 ---GEQITMLKGHYK----TVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp ---CCEEEEECCCSS----CEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred ---CcceeeeccCCC----eEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 223344432111 3555788899986666667777999999988653
No 83
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=88.22 E-value=20 Score=34.78 Aligned_cols=193 Identities=12% Similarity=0.083 Sum_probs=101.4
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCC-cEEecCCC-
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKAD-TWRRTREF- 188 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~-~W~~~~~~- 188 (366)
..++++|..+++...+...... ......+.+.|..+ + ++....+.......+.+++..++ ..+.+...
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~spdg~-~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~ 304 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK--------EKFLTNLSWSPDEN-I-LYVAEVNRAQNECKVNAYDAETGRFVRTLFVET 304 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT--------TCEEEEEEECTTSS-E-EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEE
T ss_pred eEEEEEECCCCceEeeccCCCC--------ceeEeeEEEECCCC-E-EEEEEeCCCCCeeEEEEEECCCCceeeEEEEcc
Confidence 4689999999987766533211 11233455555422 2 33222332334567888888887 67655311
Q ss_pred -CceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CC-EEEEEEecC
Q 017755 189 -PYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RG-CLWINSYYH 263 (366)
Q Consensus 189 -p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G-~L~~v~~~~ 263 (366)
.........-...- +|.+.+....+. ...|..+|...+....+...... ....+... +| .|++.....
T Consensus 305 ~~~~~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~~~---v~~~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 305 DKHYVEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGEWE---VTNFAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp CSSCCCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCCSSSC---EEEEEEECTTSSEEEEEESSS
T ss_pred CCCeECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCCCCeE---EEeeeEEcCCCCEEEEEecCC
Confidence 10000001011222 788766654432 24788888777766655322111 11112222 34 566655543
Q ss_pred CCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC----CeEEEEECCCCcE
Q 017755 264 DEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS----RCLHWYNLKDHKQ 330 (366)
Q Consensus 264 ~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~----~~l~~ydl~t~~~ 330 (366)
......||.++..+ ... ..+.... ....+.+.++|+.+++...+ ..++.+|+++++.
T Consensus 378 ~~~~~~l~~~d~~~--~~~---~~l~~~~-----~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 378 SPLERHFYCIDIKG--GKT---KDLTPES-----GMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp CTTCBEEEEEETTC--CCC---EESCCSS-----SEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE
T ss_pred CCceEEEEEEEcCC--CCc---eeccCCC-----ceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE
Confidence 32257888887432 222 2222111 24457888999877766433 3499999999873
No 84
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.05 E-value=23 Score=35.35 Aligned_cols=178 Identities=12% Similarity=0.046 Sum_probs=92.5
Q ss_pred EeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcc
Q 017755 144 FDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQN 220 (366)
Q Consensus 144 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~ 220 (366)
..++++|+..+.- .+. . ...-.++++++.+..-+.+..-. .....++.+ +|.|||...... .
T Consensus 473 P~GLAvD~~~~~L--Y~t-D---~~~~~I~v~~ldG~~~~~l~~~~----l~~P~gIaVDp~~g~LYwtD~g~~-----~ 537 (791)
T 3m0c_C 473 PDGLAVDWIHSNI--YWT-D---SVLGTVSVADTKGVKRKTLFREN----GSKPRAIVVDPVHGFMYWTDWGTP-----A 537 (791)
T ss_dssp CCEEEEETTTTEE--EEE-E---TTTTEEEEEETTSSSEEEEEECT----TCCEEEEEEETTTTEEEEEECSSS-----C
T ss_pred cceeeeeecCCcE--EEE-e---cCCCeEEEEeCCCCeEEEEEeCC----CCCcceEEEecCCCCEEEecCCCC-----C
Confidence 3467778765432 221 1 23446778888765544442100 001124555 589999875432 3
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEEEEE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcce
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYY 298 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 298 (366)
.|..+++....-..+-. .... .-..|++. +|+||++.... -.||+.+..+ ......+. .... .
T Consensus 538 ~I~~~~~dG~~~~~lv~-~~l~--~P~GLavD~~~~~LYwaD~~~----~~I~~~d~dG-~~~~~v~~--~~~~-----l 602 (791)
T 3m0c_C 538 KIKKGGLNGVDIYSLVT-ENIQ--WPNGITLDLLSGRLYWVDSKL----HSISSIDVNG-GNRKTILE--DEKR-----L 602 (791)
T ss_dssp EEEEEETTSCCEEEEEC-SSCS--CEEEEEEETTTTEEEEEETTT----TEEEEEETTS-CSCEEEEE--CTTT-----T
T ss_pred eEEEEecCCCceEEEEe-CCCC--CceEEEEecCCCeEEEEeCCC----CcEEEEecCC-CceEEEec--CCCc-----c
Confidence 79999998655444311 1111 12234444 68999987533 2567766433 22222111 1112 2
Q ss_pred eEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcEEEEEEecCCCceeeeeeeeccc
Q 017755 299 TEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQDVIEIRNENQSFWDAFICMGSL 352 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~~~v~~~~~~~~~~~~~~y~~sl 352 (366)
..|+++...++.||+.... ..+...|..+++-..+-..+. ..-+.+.+|.+..
T Consensus 603 ~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l-~~P~~i~v~h~~~ 656 (791)
T 3m0c_C 603 AHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENL-LSPEDMVLFHNLT 656 (791)
T ss_dssp SSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSC-SCCCCEEEESGGG
T ss_pred CCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCC-CCceeEeeecccc
Confidence 4556666566668887644 459999988876443323322 2233455555443
No 85
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=87.97 E-value=19 Score=34.33 Aligned_cols=196 Identities=10% Similarity=-0.064 Sum_probs=102.8
Q ss_pred cceEEeee-cCceEEEEcCCCcceE-ecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 101 HGLLAMFN-RRLGMSVFNPTTKKFK-LFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 101 nGLl~~~~-~~~~~~V~NP~t~~~~-~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
++++.+.+ ..+.+.|+|+.|++.. .+|.... ..++.+.|.. +|-.+. . ..-.+.+|+..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~------------p~~v~~SpDG-r~lyv~--~----~dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA------------VHISRLSASG-RYLFVI--G----RDGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSC------------EEEEEECTTS-CEEEEE--E----TTSEEEEEETT
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC------------ccceEECCCC-CEEEEE--c----CCCeEEEEECC
Confidence 44554443 4678999999998865 4543221 1245666643 333332 1 22368888885
Q ss_pred CCcEEecCCCCceeecCCCCceEE------CCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCC-CC------CC
Q 017755 179 ADTWRRTREFPYYILDDRCNGVFI------AGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHG-MK------GG 244 (366)
Q Consensus 179 ~~~W~~~~~~p~~~~~~~~~~v~~------~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~-~~------~~ 244 (366)
+.+-+.+..++.+... .++.+ +|+.-+++.+.. ..+.++|..+.+- ..++.... .+ ..
T Consensus 227 ~~t~~~v~~i~~G~~P---~~ia~s~~~~pDGk~l~v~n~~~-----~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~ 298 (567)
T 1qks_A 227 MKEPTTVAEIKIGSEA---RSIETSKMEGWEDKYAIAGAYWP-----PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEP 298 (567)
T ss_dssp SSSCCEEEEEECCSEE---EEEEECCSTTCTTTEEEEEEEET-----TEEEEEETTTCCEEEEEECCEECTTTCCEESCC
T ss_pred CCCCcEeEEEecCCCC---ceeEEccccCCCCCEEEEEEccC-----CeEEEEECCCCcEEEEEeccccccccccccCCC
Confidence 2111233222221111 12222 576555555443 4789999887554 33444211 10 00
Q ss_pred eeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEE
Q 017755 245 FCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHW 322 (366)
Q Consensus 245 ~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ 322 (366)
....+... ++..+++...+.. .||+.+-.+ ....++..|..... .+.+++.++|+.+++... ...+.+
T Consensus 299 rva~i~~s~~~~~~vv~~~~~g---~v~~vd~~~--~~~~~v~~i~~~~~-----~~d~~~~pdgr~~~va~~~sn~V~V 368 (567)
T 1qks_A 299 RVAAILASHYRPEFIVNVKETG---KILLVDYTD--LNNLKTTEISAERF-----LHDGGLDGSHRYFITAANARNKLVV 368 (567)
T ss_dssp CEEEEEECSSSSEEEEEETTTT---EEEEEETTC--SSEEEEEEEECCSS-----EEEEEECTTSCEEEEEEGGGTEEEE
T ss_pred ceEEEEEcCCCCEEEEEecCCC---eEEEEecCC--Cccceeeeeecccc-----ccCceECCCCCEEEEEeCCCCeEEE
Confidence 11122222 2344444443322 566665322 23555556654443 556788999997777663 456999
Q ss_pred EECCCCcEEEE
Q 017755 323 YNLKDHKQDVI 333 (366)
Q Consensus 323 ydl~t~~~~~v 333 (366)
+|.+|+++...
T Consensus 369 iD~~t~kl~~~ 379 (567)
T 1qks_A 369 IDTKEGKLVAI 379 (567)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCcEEEE
Confidence 99999986543
No 86
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=87.79 E-value=12 Score=33.39 Aligned_cols=72 Identities=13% Similarity=0.139 Sum_probs=46.5
Q ss_pred CCEEEEEEecCCC-----CeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCC-eEEEEE-cCCeEEEEEC
Q 017755 253 RGCLWINSYYHDE-----PRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGD-KALIYQ-HSRCLHWYNL 325 (366)
Q Consensus 253 ~G~L~~v~~~~~~-----~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~-~i~l~~-~~~~l~~ydl 325 (366)
+++|++....... ..=+||+++- .+...+.+|..... ..-+.+.++|+ .++... .+..+.+||.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~----~t~~vv~~i~~g~~-----p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTG----LVGQTSSQISLGHD-----VDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEEC----CCCEEEEEEECCCC-----cCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 3577776543210 1236888884 45667777765442 44578889998 555544 3556999999
Q ss_pred CCCcEEEE
Q 017755 326 KDHKQDVI 333 (366)
Q Consensus 326 ~t~~~~~v 333 (366)
+|++....
T Consensus 349 ~t~~vv~~ 356 (373)
T 2mad_H 349 GAGDQDQS 356 (373)
T ss_pred CCCCEEee
Confidence 99887544
No 87
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=87.53 E-value=14 Score=32.41 Aligned_cols=203 Identities=9% Similarity=0.061 Sum_probs=95.6
Q ss_pred EEeeecCceEEEEcCCCcceEecCCCCC----CCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCC
Q 017755 104 LAMFNRRLGMSVFNPTTKKFKLFPQFWS----DCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKA 179 (366)
Q Consensus 104 l~~~~~~~~~~V~NP~t~~~~~lP~~~~----~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~ 179 (366)
++....++.+.|||..+++......... .. ............+.+.|..+.+-+.+ ...-.+.+|+..+
T Consensus 59 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~------~~d~~i~iwd~~~ 131 (408)
T 4a11_B 59 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGR-DHPDVHRYSVETVQWYPHDTGMFTSS------SFDKTLKVWDTNT 131 (408)
T ss_dssp EEEEETTSCEEEEECCCCSSSSCEEECEEEEECT-TCTTCCSSCEEEEEECTTCTTCEEEE------ETTSEEEEEETTT
T ss_pred EEEEcCCCeEEEEECCCCcccceEeccccccccc-cccccCCCcEEEEEEccCCCcEEEEE------eCCCeEEEeeCCC
Confidence 3333456678888887765432211000 00 00000022334566666444433322 1334678888877
Q ss_pred CcEEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCE-E
Q 017755 180 DTWRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGC-L 256 (366)
Q Consensus 180 ~~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~-L 256 (366)
+.-...-..+.........+..-++.+...+..+ ..|..+|+.+.+.. .+..... ....+... +|. +
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l 201 (408)
T 4a11_B 132 LQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSGSCSHILQGHRQ----EILAVSWSPRYDYI 201 (408)
T ss_dssp TEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS------SSEEEEESSSSCCCEEECCCCS----CEEEEEECSSCTTE
T ss_pred CccceeccCCCceeeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCcceeeeecCCCC----cEEEEEECCCCCcE
Confidence 6443322111111000000111133344444443 37888998876542 2332111 12233333 344 4
Q ss_pred EEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCC----------CCCCcc-eeEEEEEEeCCCeEEEEEcCCeEEEEEC
Q 017755 257 WINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKM----------LHETCY-YTEAFAFSKDGDKALIYQHSRCLHWYNL 325 (366)
Q Consensus 257 ~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~----------~~~~~~-~~~~~~~~~~g~~i~l~~~~~~l~~ydl 325 (366)
.+...... .+.+|-+..... .. ..+... ...... ...-+.+.++|+.++....++.+.+||+
T Consensus 202 l~~~~~dg--~i~i~d~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (408)
T 4a11_B 202 LATASADS--RVKLWDVRRASG--CL---ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNS 274 (408)
T ss_dssp EEEEETTS--CEEEEETTCSSC--CS---EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEcCCC--cEEEEECCCCCc--cc---ccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEEC
Confidence 54544444 699998865321 11 111100 000111 3556778889987777777777999999
Q ss_pred CCCcE
Q 017755 326 KDHKQ 330 (366)
Q Consensus 326 ~t~~~ 330 (366)
++++.
T Consensus 275 ~~~~~ 279 (408)
T 4a11_B 275 SNGEN 279 (408)
T ss_dssp TTCCB
T ss_pred CCCcc
Confidence 98764
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=87.39 E-value=13 Score=31.77 Aligned_cols=100 Identities=12% Similarity=0.108 Sum_probs=52.2
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEEEEEC-CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCccee
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQVGVLR-GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYT 299 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~~-G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 299 (366)
.+..+|+....-................+.... +.+.+...... .+.+|-++. ...+..+....- ..
T Consensus 151 ~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~--~i~i~d~~~------~~~~~~~~~h~~----~v 218 (340)
T 4aow_A 151 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK--LVKVWNLAN------CKLKTNHIGHTG----YL 218 (340)
T ss_dssp CEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTS--CEEEEETTT------TEEEEEECCCSS----CE
T ss_pred eEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCC--EEEEEECCC------CceeeEecCCCC----cE
Confidence 577788776554444333222111111111112 23333333333 689997764 122333221111 24
Q ss_pred EEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 300 EAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 300 ~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
.-+++.++|+.++....++.+.+||+++.+...
T Consensus 219 ~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 219 NTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY 251 (340)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEeccCceee
Confidence 456778888866666677779999998876533
No 89
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=87.27 E-value=14 Score=32.13 Aligned_cols=107 Identities=7% Similarity=0.069 Sum_probs=61.5
Q ss_pred eEEEEECCCceeEEE-CCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcce
Q 017755 221 MILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYY 298 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 298 (366)
.+..+|..++.+..+ .+..+. ..-..+.-. +|++.+...... .+.+|.++.. ..+..+..+....- .
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~--~~v~~v~~sp~~~~l~s~s~D~--~v~iwd~~~~---~~~~~~~~~~~h~~----~ 152 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHE--NEVKSVAWAPSGNLLATCSRDK--SVWVWEVDEE---DEYECVSVLNSHTQ----D 152 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCS--SCEEEEEECTTSSEEEEEETTS--CEEEEEECTT---SCEEEEEEECCCCS----C
T ss_pred cEEEEEccCCCeEEEEEccCCC--CCceEEEEeCCCCEEEEEECCC--eEEEEECCCC---CCeEEEEEecCcCC----C
Confidence 677788877665443 222221 112233333 466555555444 7999999752 33444444332111 3
Q ss_pred eEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE-EEecC
Q 017755 299 TEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI-EIRNE 338 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v-~~~~~ 338 (366)
..-+.+.++|+.++....++.+.+||.+++++..+ .+.+.
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h 193 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH 193 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC
Confidence 45577888898666666777799999998876544 34443
No 90
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=87.25 E-value=24 Score=34.70 Aligned_cols=183 Identities=6% Similarity=0.054 Sum_probs=90.7
Q ss_pred EEeeecCceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcE
Q 017755 104 LAMFNRRLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTW 182 (366)
Q Consensus 104 l~~~~~~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W 182 (366)
|......+.+.|||..+++... +.... .....+.+.|.. ++ ++... ..-.+.+|+..++..
T Consensus 28 la~~~~~g~v~iwd~~~~~~~~~~~~~~-----------~~v~~~~~s~~~-~~--l~~~~----~dg~i~vw~~~~~~~ 89 (814)
T 3mkq_A 28 VLTTLYSGRVEIWNYETQVEVRSIQVTE-----------TPVRAGKFIARK-NW--IIVGS----DDFRIRVFNYNTGEK 89 (814)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCS-----------SCEEEEEEEGGG-TE--EEEEE----TTSEEEEEETTTCCE
T ss_pred EEEEeCCCEEEEEECCCCceEEEEecCC-----------CcEEEEEEeCCC-CE--EEEEe----CCCeEEEEECCCCcE
Confidence 3333446678899988877543 22111 112345555532 22 22222 244678888877754
Q ss_pred Ee-cCCCCceeecCCCCceE--ECCeEEEEEeeCCCCCCcceEEEEECCCc-eeEE-ECCCCCCCCCeeeEEEEE--CCE
Q 017755 183 RR-TREFPYYILDDRCNGVF--IAGALHWLAARGSVRTGQNMILAFDLKSE-KFYE-VQQPHGMKGGFCSQVGVL--RGC 255 (366)
Q Consensus 183 ~~-~~~~p~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~i~~fD~~~e-~~~~-i~~P~~~~~~~~~~l~~~--~G~ 255 (366)
.. +..-.... ..+. -+|..-..+..+ ..|..+|+.+. .... +..... ....+.-. +|.
T Consensus 90 ~~~~~~~~~~v-----~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~~----~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 90 VVDFEAHPDYI-----RSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFEGHEH----FVMCVAFNPKDPS 154 (814)
T ss_dssp EEEEECCSSCE-----EEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEECCSS----CEEEEEEETTEEE
T ss_pred EEEEecCCCCE-----EEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEcCCCC----cEEEEEEEcCCCC
Confidence 32 11111101 0111 134433333333 37888998765 3322 222111 12233333 345
Q ss_pred EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEe--CCCeEEEEEcCCeEEEEECCCCcE
Q 017755 256 LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSK--DGDKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 256 L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~--~g~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
+.+...... .+.+|-+.... ..+... ..... ....+.+.+ +|..++....++.+.+||+++++.
T Consensus 155 ~l~~~~~dg--~v~vwd~~~~~--~~~~~~--~~~~~-----~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 155 TFASGCLDR--TVKVWSLGQST--PNFTLT--TGQER-----GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp EEEEEETTS--EEEEEETTCSS--CSEEEE--CCCTT-----CCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred EEEEEeCCC--eEEEEECCCCc--ceeEEe--cCCCC-----CEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 555544444 79999886421 222211 11101 233456666 787666666777899999998874
No 91
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=87.13 E-value=12 Score=31.28 Aligned_cols=206 Identities=11% Similarity=0.119 Sum_probs=104.7
Q ss_pred EEecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEE
Q 017755 96 VIGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVII 174 (366)
Q Consensus 96 ~~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~v 174 (366)
+.-+.+|-+.+.+ ....+.++|+..+....++...... .. .....++.+++..+. ++... . .....+.+
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~-~~----~~~p~~i~~~~~~g~--l~v~~-~--~~~~~i~~ 104 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRD-SQ----LLYPNRVAVVRNSGD--IIVTE-R--SPTHQIQI 104 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSST-TC----BSSEEEEEEETTTTE--EEEEE-C--GGGCEEEE
T ss_pred EEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCc-cc----ccCceEEEEEcCCCe--EEEEc-C--CCCCEEEE
Confidence 3334456555543 4567899999866666665432111 00 122445666433232 22211 0 11345777
Q ss_pred EEcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE
Q 017755 175 YSLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL 252 (366)
Q Consensus 175 yss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~ 252 (366)
|+.....-+.+...... ...++.+ +|.+|...... ..|..||...+....+..+.... .-..++..
T Consensus 105 ~d~~g~~~~~~~~~~~~----~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~~~--~p~~i~~~ 172 (286)
T 1q7f_A 105 YNQYGQFVRKFGATILQ----HPRGVTVDNKGRIIVVECKV------MRVIIFDQNGNVLHKFGCSKHLE--FPNGVVVN 172 (286)
T ss_dssp ECTTSCEEEEECTTTCS----CEEEEEECTTSCEEEEETTT------TEEEEECTTSCEEEEEECTTTCS--SEEEEEEC
T ss_pred ECCCCcEEEEecCccCC----CceEEEEeCCCCEEEEECCC------CEEEEEcCCCCEEEEeCCCCccC--CcEEEEEC
Confidence 77443333333211100 0012333 67766554332 37999998877666664432221 12344444
Q ss_pred -CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-C-eEEEEECCCCc
Q 017755 253 -RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-R-CLHWYNLKDHK 329 (366)
Q Consensus 253 -~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~-~l~~ydl~t~~ 329 (366)
+|.|++...... .+.+|-.+ ... +..+..... .....-+++.++|. +++.... . .+..||.+.+.
T Consensus 173 ~~g~l~v~~~~~~--~i~~~~~~-----g~~--~~~~~~~g~--~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~g~~ 240 (286)
T 1q7f_A 173 DKQEIFISDNRAH--CVKVFNYE-----GQY--LRQIGGEGI--TNYPIGVGINSNGE-ILIADNHNNFNLTIFTQDGQL 240 (286)
T ss_dssp SSSEEEEEEGGGT--EEEEEETT-----CCE--EEEESCTTT--SCSEEEEEECTTCC-EEEEECSSSCEEEEECTTSCE
T ss_pred CCCCEEEEECCCC--EEEEEcCC-----CCE--EEEEccCCc--cCCCcEEEECCCCC-EEEEeCCCCEEEEEECCCCCE
Confidence 588887765433 57776532 122 233332211 01244467777887 7776643 3 79999987776
Q ss_pred EEEEEE
Q 017755 330 QDVIEI 335 (366)
Q Consensus 330 ~~~v~~ 335 (366)
++.+..
T Consensus 241 ~~~~~~ 246 (286)
T 1q7f_A 241 ISALES 246 (286)
T ss_dssp EEEEEE
T ss_pred EEEEcc
Confidence 766644
No 92
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=86.90 E-value=15 Score=31.92 Aligned_cols=95 Identities=11% Similarity=0.182 Sum_probs=56.4
Q ss_pred ceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc
Q 017755 220 NMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY 297 (366)
Q Consensus 220 ~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 297 (366)
..|..+|+.+.+... +..... ....+... +|++.+...... .+.+|-+... ..+..+....-
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~----~v~~~~~~~~~~~l~sg~~d~--~v~~wd~~~~------~~~~~~~~h~~---- 227 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTG----DVMSLSLAPDTRLFVSGACDA--SAKLWDVREG------MCRQTFTGHES---- 227 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETTS--CEEEEETTTC------SEEEEECCCSS----
T ss_pred CcEEEEECCCCcEEEEEcCCCC----ceEEEEECCCCCEEEEEeCCC--cEEEEECCCC------eeEEEEcCCcC----
Confidence 378899998876533 232111 12233333 466655555444 7999987641 12333322111
Q ss_pred eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcE
Q 017755 298 YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
...-+++.++|+.++....++.+.+||+++++.
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 355678888998666666777799999998764
No 93
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=86.85 E-value=16 Score=32.25 Aligned_cols=111 Identities=8% Similarity=-0.000 Sum_probs=56.7
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEE-EEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeE--EEEecCCCCCCcc
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQV-GVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSK--LCSFSKMLHETCY 297 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l-~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~--~~~i~~~~~~~~~ 297 (366)
.+..++..+.+.......... ......+ ..-+|+..+.........+.+|..+... ..... ...+....-
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~---- 270 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFDK-NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKS--GNTSVLRSKQVTNRFK---- 270 (365)
T ss_dssp CEEEEETTTCCEEEEECCCCT-TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET--TEEEEEEEEEEESSCS----
T ss_pred eEEEEEeccCcceeeeecCCC-CCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccc--ceecceeeeeecCCCC----
Confidence 577778776655433222111 1111222 2235766655544332234444444311 11221 222222111
Q ss_pred eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEEEEecC
Q 017755 298 YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVIEIRNE 338 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v~~~~~ 338 (366)
...-+++.++|+.|.....++.+.+||+++++....-..++
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH 311 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH 311 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS
T ss_pred CeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc
Confidence 35567889999977777777779999999987543322343
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=86.85 E-value=17 Score=32.73 Aligned_cols=113 Identities=9% Similarity=0.110 Sum_probs=62.2
Q ss_pred ceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecC
Q 017755 199 GVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYG 277 (366)
Q Consensus 199 ~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~ 277 (366)
.+..+|.....+..+ ..|..+|+.+.+... +..... ....+.. +|.+.+...... .+.+|-++..
T Consensus 284 ~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~-~~~~l~~~~~dg--~i~vwd~~~~- 349 (445)
T 2ovr_B 284 SLQFDGIHVVSGSLD------TSIRVWDVETGNCIHTLTGHQS----LTSGMEL-KDNILVSGNADS--TVKIWDIKTG- 349 (445)
T ss_dssp EEEECSSEEEEEETT------SCEEEEETTTCCEEEEECCCCS----CEEEEEE-ETTEEEEEETTS--CEEEEETTTC-
T ss_pred EEEECCCEEEEEeCC------CeEEEEECCCCCEEEEEcCCcc----cEEEEEE-eCCEEEEEeCCC--eEEEEECCCC-
Confidence 345577766665554 379999998766433 332211 1223333 444444444333 6999987641
Q ss_pred CCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 278 SQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 278 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
..+..+....-. ...+.++.-+++.++....++.+.+||+++++....
T Consensus 350 -----~~~~~~~~~~~~---~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 397 (445)
T 2ovr_B 350 -----QCLQTLQGPNKH---QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRN 397 (445)
T ss_dssp -----CEEEEECSTTSC---SSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -----cEEEEEccCCCC---CCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeee
Confidence 234444321110 122233333577666667777899999999986443
No 95
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=86.76 E-value=18 Score=32.80 Aligned_cols=67 Identities=9% Similarity=-0.055 Sum_probs=41.1
Q ss_pred CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 254 GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 254 G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
|++.+...... .+.+|-+.... - +..+.... .. ...-+++. +|+.++....++.+.+||+++++...
T Consensus 210 ~~~l~s~~~d~--~i~vwd~~~~~----~--~~~~~~~h-~~--~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 210 HQFIITSDRDE--HIKISHYPQCF----I--VDKWLFGH-KH--FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLS 276 (450)
T ss_dssp CEEEEEEETTS--CEEEEEESCTT----C--EEEECCCC-SS--CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEE
T ss_pred CcEEEEEcCCC--cEEEEECCCCc----e--eeeeecCC-CC--ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEee
Confidence 65555555443 79999987521 1 22211111 00 24556777 88877777777789999999988543
No 96
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=86.66 E-value=17 Score=32.50 Aligned_cols=194 Identities=11% Similarity=0.018 Sum_probs=96.5
Q ss_pred ecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEE
Q 017755 98 GCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYS 176 (366)
Q Consensus 98 ~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vys 176 (366)
+..+|.|...+ ....++.+++.++....+-..... ...++.+|+..+...+.- .....+++++
T Consensus 124 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~----------~p~glavd~~~g~lY~~d------~~~~~I~~~~ 187 (386)
T 3v65_B 124 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE----------SPGGLAVDWVHDKLYWTD------SGTSRIEVAN 187 (386)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS----------CCCCEEEETTTTEEEEEE------TTTTEEEECB
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC----------CccEEEEEeCCCeEEEEc------CCCCeEEEEe
Confidence 44567766654 355778888877765443222211 123567776544322221 1233556666
Q ss_pred cCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEE--
Q 017755 177 LKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGV-- 251 (366)
Q Consensus 177 s~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~-- 251 (366)
..+..-+.+..-. . ....++.+ +|.|||...... ..|..+|+....-..+-. .... .-..|+.
T Consensus 188 ~dg~~~~~l~~~~--l--~~P~giavdp~~g~ly~td~~~~-----~~I~r~~~dG~~~~~~~~-~~~~--~PnGlavd~ 255 (386)
T 3v65_B 188 LDGAHRKVLLWQS--L--EKPRAIALHPMEGTIYWTDWGNT-----PRIEASSMDGSGRRIIAD-THLF--WPNGLTIDY 255 (386)
T ss_dssp TTSCSCEEEECSS--C--SCEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEEEEC-SSCS--CEEEEEEEG
T ss_pred CCCCceEEeecCC--C--CCCcEEEEEcCCCeEEEeccCCC-----CEEEEEeCCCCCcEEEEE-CCCC--CeeeEEEeC
Confidence 6543322221100 0 01123433 589999876541 379999998654443311 1111 1223444
Q ss_pred ECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCc-
Q 017755 252 LRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHK- 329 (366)
Q Consensus 252 ~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~- 329 (366)
.+|+||++..... .|+..+..+. . ...+-...+ ..|.++.-+++.+|+.... ..+..+|..+++
T Consensus 256 ~~~~lY~aD~~~~----~I~~~d~dG~-~----~~~~~~~~~-----~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 256 AGRRMYWVDAKHH----VIERANLDGS-H----RKAVISQGL-----PHPFAITVFEDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp GGTEEEEEETTTT----EEEEECTTSC-S----CEEEECSSC-----SSEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCEEEEEECCCC----EEEEEeCCCC-e----eEEEEECCC-----CCceEEEEECCEEEEeeCCCCeEEEEECCCCcc
Confidence 3689999876433 5666653221 1 111111111 2344443344558887643 469999965555
Q ss_pred EEEE
Q 017755 330 QDVI 333 (366)
Q Consensus 330 ~~~v 333 (366)
.+.+
T Consensus 322 ~~~i 325 (386)
T 3v65_B 322 QEII 325 (386)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 4444
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.61 E-value=15 Score=31.62 Aligned_cols=197 Identities=11% Similarity=0.072 Sum_probs=94.5
Q ss_pred eEEeeecCceEEEEcCCCcc--eEecCCCCCCCccCCCCCCeeEeEEeecCC-CCCeeEEEEEEecccceeEEEEEEcCC
Q 017755 103 LLAMFNRRLGMSVFNPTTKK--FKLFPQFWSDCYTDYMTNNFHFDGFGYDAS-TDDYKLVRIIQSYKVDYLEVIIYSLKA 179 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~--~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~-~~~ykVv~~~~~~~~~~~~~~vyss~~ 179 (366)
+++.....+.+.+||..+++ ...+....... ......+.+.+. ..+-+.+.... ..-.+.+|+.++
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~l~~~~----~d~~i~i~d~~~ 199 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGEN-------KRDCWTVAFGNAYNQEERVVCAGY----DNGDIKLFDLRN 199 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEEECCCTTSC-------CCCEEEEEEECCCC-CCCEEEEEE----TTSEEEEEETTT
T ss_pred EEEEEeCCCeEEEEeCCCCCCcceeccccCCCC-------CCceEEEEEEeccCCCCCEEEEEc----cCCeEEEEECcc
Confidence 44444567789999998876 33333322211 111222332221 11112222222 234688888887
Q ss_pred CcEEecCCCCceeecCCCCceEE-----CCeEEEEEeeCCCCCCcceEEEEECCCcee----EEECCCCCCCCCeeeEEE
Q 017755 180 DTWRRTREFPYYILDDRCNGVFI-----AGALHWLAARGSVRTGQNMILAFDLKSEKF----YEVQQPHGMKGGFCSQVG 250 (366)
Q Consensus 180 ~~W~~~~~~p~~~~~~~~~~v~~-----~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~----~~i~~P~~~~~~~~~~l~ 250 (366)
+.=.......... ..+.+ +|.....+..+ ..|..+|+.+.+. ....+..+. ..-..+.
T Consensus 200 ~~~~~~~~~~~~v-----~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~--~~v~~~~ 266 (357)
T 3i2n_A 200 MALRWETNIKNGV-----CSLEFDRKDISMNKLVATSLE------GKFHVFDMRTQHPTKGFASVSEKAHK--STVWQVR 266 (357)
T ss_dssp TEEEEEEECSSCE-----EEEEESCSSSSCCEEEEEEST------TEEEEEEEEEEETTTEEEEEEEECCS--SCEEEEE
T ss_pred CceeeecCCCCce-----EEEEcCCCCCCCCEEEEECCC------CeEEEEeCcCCCcccceeeeccCCCc--CCEEEEE
Confidence 6432221111111 12222 45555555444 3688888875432 111111111 1123333
Q ss_pred EE-CCE-EEEEEecCCCCeEEEEEEeecCCC-------------CCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEE-E
Q 017755 251 VL-RGC-LWINSYYHDEPRCDIWVMKEYGSQ-------------QSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALI-Y 314 (366)
Q Consensus 251 ~~-~G~-L~~v~~~~~~~~l~iW~l~~~~~~-------------~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l-~ 314 (366)
.. +|+ +.+...... .+.+|.++..... .++..+..+....- ...-+++.++|..+++ .
T Consensus 267 ~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~~s~ 340 (357)
T 3i2n_A 267 HLPQNRELFLTAGGAG--GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ----PISSLDWSPDKRGLCVCS 340 (357)
T ss_dssp EETTEEEEEEEEETTS--EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS----CEEEEEECSSSTTEEEEE
T ss_pred ECCCCCcEEEEEeCCC--cEEEeecCCCcccccccCCCCccccccccceeeccccCCC----CeeEEEEcCCCCeEEEEe
Confidence 33 355 444444333 7999999853211 13444554443221 3555788889986664 4
Q ss_pred EcCCeEEEEECCCCc
Q 017755 315 QHSRCLHWYNLKDHK 329 (366)
Q Consensus 315 ~~~~~l~~ydl~t~~ 329 (366)
..++.+.+||+.+..
T Consensus 341 ~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 341 SFDQTVRVLIVTKLN 355 (357)
T ss_dssp ETTSEEEEEEECC--
T ss_pred cCCCcEEEEECCCcc
Confidence 567779999997653
No 98
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=86.39 E-value=14 Score=31.07 Aligned_cols=191 Identities=8% Similarity=0.043 Sum_probs=92.4
Q ss_pred ccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCC
Q 017755 100 CHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKA 179 (366)
Q Consensus 100 ~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~ 179 (366)
.+++++.....+.+.|||..+++....-..... ....+.+.|. +++-+.+ . ..-.+.+++..+
T Consensus 28 ~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~----------~v~~~~~~~~-~~~l~~~--~----~dg~i~~~~~~~ 90 (313)
T 3odt_A 28 DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQG----------FLNSVCYDSE-KELLLFG--G----KDTMINGVPLFA 90 (313)
T ss_dssp ETTEEEEEETTSEEEEEEESSSEEEEEEEECSS----------CEEEEEEETT-TTEEEEE--E----TTSCEEEEETTC
T ss_pred CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCc----------cEEEEEECCC-CCEEEEe--c----CCCeEEEEEeee
Confidence 344555555677889999887765443222111 1234555553 2222222 1 223345555543
Q ss_pred C-cEEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEECCEEEE
Q 017755 180 D-TWRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVLRGCLWI 258 (366)
Q Consensus 180 ~-~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~~G~L~~ 258 (366)
. ..+.+..+.... .....+..+|.....+..+ ..|..+|.. +....+...... .........++.+.+
T Consensus 91 ~~~~~~~~~~~~~~--~~i~~~~~~~~~l~~~~~d------~~i~~~d~~-~~~~~~~~~~~~--v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 91 TSGEDPLYTLIGHQ--GNVCSLSFQDGVVISGSWD------KTAKVWKEG-SLVYNLQAHNAS--VWDAKVVSFSENKFL 159 (313)
T ss_dssp CTTSCC-CEECCCS--SCEEEEEEETTEEEEEETT------SEEEEEETT-EEEEEEECCSSC--EEEEEEEETTTTEEE
T ss_pred cCCCCcccchhhcc--cCEEEEEecCCEEEEEeCC------CCEEEEcCC-cEEEecccCCCc--eeEEEEccCCCCEEE
Confidence 2 111111111000 0112344566655555544 378888832 222333322211 012222332566655
Q ss_pred EEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 259 NSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 259 v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
+..... .+.+|-... ....+....- ....-+.+.+++. ++....++.+.+||+++++...
T Consensus 160 ~~~~d~--~i~i~d~~~--------~~~~~~~~~~---~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~ 219 (313)
T 3odt_A 160 TASADK--TIKLWQNDK--------VIKTFSGIHN---DVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLR 219 (313)
T ss_dssp EEETTS--CEEEEETTE--------EEEEECSSCS---SCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEE
T ss_pred EEECCC--CEEEEecCc--------eEEEEeccCc---ccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhh
Confidence 555444 699996221 1222222111 0355577778887 6666777789999999887543
No 99
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=86.27 E-value=15 Score=31.25 Aligned_cols=186 Identities=15% Similarity=0.153 Sum_probs=94.9
Q ss_pred EEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEE
Q 017755 104 LAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWR 183 (366)
Q Consensus 104 l~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~ 183 (366)
+......+.+.+||..+++....-... ......+.+.|.. + .+.... ....+.+|+.+++.-.
T Consensus 38 l~s~~~dg~i~iw~~~~~~~~~~~~~h----------~~~v~~~~~~~~~-~--~l~s~~----~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 38 LASSSADKLIKIWGAYDGKFEKTISGH----------KLGISDVAWSSDS-N--LLVSAS----DDKTLKIWDVSSGKCL 100 (312)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCC----------SSCEEEEEECTTS-S--EEEEEE----TTSEEEEEETTTCCEE
T ss_pred EEEeeCCCeEEEEeCCCcccchhhccC----------CCceEEEEEcCCC-C--EEEEEC----CCCEEEEEECCCCcEE
Confidence 333345667889998887765432211 1123345666642 2 222221 2346778888765321
Q ss_pred e-cCCCCceeecCCCCceE--ECCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCEEEE
Q 017755 184 R-TREFPYYILDDRCNGVF--IAGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGCLWI 258 (366)
Q Consensus 184 ~-~~~~p~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~ 258 (366)
. +..-.... ..+. -+|.+...+..+ ..|..+|+.+.+.. .+..... ....+.-. +|++.+
T Consensus 101 ~~~~~~~~~v-----~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 101 KTLKGHSNYV-----FCCNFNPQSNLIVSGSFD------ESVRIWDVKTGKCLKTLPAHSD----PVSAVHFNRDGSLIV 165 (312)
T ss_dssp EEEECCSSCE-----EEEEECSSSSEEEEEETT------SCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSEEE
T ss_pred EEEcCCCCCE-----EEEEEcCCCCEEEEEeCC------CcEEEEECCCCEEEEEecCCCC----cEEEEEEcCCCCEEE
Confidence 1 11000000 0111 134433333333 37889999876543 2322111 12223222 466655
Q ss_pred EEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 259 NSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 259 v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
...... .+.+|-+... ..+..+....-. ....+.+.++|+.++....++.+.+||+++++...
T Consensus 166 ~~~~d~--~i~~wd~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 166 SSSYDG--LCRIWDTASG------QCLKTLIDDDNP---PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp EEETTS--CEEEEETTTC------CEEEEECCSSCC---CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred EEeCCC--cEEEEECCCC------ceeeEEeccCCC---ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 555444 6999987641 122322211110 24557888899977777777789999999887543
No 100
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=86.17 E-value=18 Score=32.18 Aligned_cols=101 Identities=11% Similarity=0.043 Sum_probs=55.5
Q ss_pred ceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc
Q 017755 220 NMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY 297 (366)
Q Consensus 220 ~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 297 (366)
..|..+|+.+.+.. .+..+.. ...+.-. +|+..++......+.+.||.+.. ........+....-
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~----~~~~~~~~~~~h~~---- 350 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGSQ-----VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS----SGLTKQVDIPAHDT---- 350 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSSC-----EEEEEECSSSSEEEEEECTTTCEEEEEEEET----TEEEEEEEEECCSS----
T ss_pred CEEEEEECCCCCEEEEEeCCCc-----EEEEEECCCCCeEEEEeecCCCcEEEEecCC----ccceeEEEecCCCC----
Confidence 37888898876543 3332211 2222222 45555544322223899999885 33555444432221
Q ss_pred eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 298 YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
...-+.+.++|..++....++.+.+||+.+++....
T Consensus 351 ~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 351 RVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp CCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 244467888998676667777899999998875443
No 101
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=85.84 E-value=18 Score=31.81 Aligned_cols=116 Identities=12% Similarity=0.166 Sum_probs=60.4
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCC---------CCCeeeEEEEE-CCEEEEEEecCCCCeEEEE
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGM---------KGGFCSQVGVL-RGCLWINSYYHDEPRCDIW 271 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~---------~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW 271 (366)
+|.+...+..+. ....|..+|+.+.+. ..+..|... +......+.-. +|++.+...... .+.||
T Consensus 244 ~~~~l~~~~~d~---~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iw 318 (397)
T 1sq9_A 244 QGSLLAIAHDSN---SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG--KLRFW 318 (397)
T ss_dssp STTEEEEEEEET---TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS--EEEEE
T ss_pred CCCEEEEEecCC---CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC--eEEEE
Confidence 455555554430 002799999987654 344443210 11112233333 466555444333 79999
Q ss_pred EEeecCCCCCeeEEEEecCC----CC-----CC--------cceeEEEEEEeCC----------CeEEEEEcCCeEEEEE
Q 017755 272 VMKEYGSQQSWSKLCSFSKM----LH-----ET--------CYYTEAFAFSKDG----------DKALIYQHSRCLHWYN 324 (366)
Q Consensus 272 ~l~~~~~~~~W~~~~~i~~~----~~-----~~--------~~~~~~~~~~~~g----------~~i~l~~~~~~l~~yd 324 (366)
-++. ...+..+... .. .+ .....-+.+.++| ..++....++.+.+||
T Consensus 319 d~~~------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 319 DVKT------KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp ETTT------TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred EcCC------CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 8764 2334444411 00 00 1135567888887 5566666777899999
Q ss_pred CCCCc
Q 017755 325 LKDHK 329 (366)
Q Consensus 325 l~t~~ 329 (366)
+++++
T Consensus 393 ~~~g~ 397 (397)
T 1sq9_A 393 EAGGK 397 (397)
T ss_dssp EEC--
T ss_pred cCCCC
Confidence 98874
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=85.80 E-value=11 Score=39.33 Aligned_cols=185 Identities=9% Similarity=0.083 Sum_probs=92.6
Q ss_pred eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcE
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTW 182 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W 182 (366)
++......+.+.+||..+++.......... ....+.+.|.. ++ ++.. .....+.+|+..++..
T Consensus 975 ~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~----------~v~~l~~s~dg-~~-l~s~-----~~dg~i~vwd~~~~~~ 1037 (1249)
T 3sfz_A 975 YVAFGDEDGAIKIIELPNNRVFSSGVGHKK----------AVRHIQFTADG-KT-LISS-----SEDSVIQVWNWQTGDY 1037 (1249)
T ss_dssp EEEEEETTSCCEEEETTTTSCEEECCCCSS----------CCCCEEECSSS-SC-EEEE-----CSSSBEEEEETTTTEE
T ss_pred EEEEEcCCCCEEEEEcCCCceeeecccCCC----------ceEEEEECCCC-CE-EEEE-----cCCCEEEEEECCCCce
Confidence 344444567788888887775443221111 11234444432 22 2221 1234578888888776
Q ss_pred EecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCEEEEEE
Q 017755 183 RRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGCLWINS 260 (366)
Q Consensus 183 ~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~v~ 260 (366)
............. ...-+|.+ ..+..+ ..|..+|+.+.+.. .+...... ...+... +|++.+..
T Consensus 1038 ~~~~~~~~~v~~~---~~~~~~~l-~~~~~d------g~v~vwd~~~~~~~~~~~~~~~~----v~~~~~s~d~~~l~s~ 1103 (1249)
T 3sfz_A 1038 VFLQAHQETVKDF---RLLQDSRL-LSWSFD------GTVKVWNVITGRIERDFTCHQGT----VLSCAISSDATKFSST 1103 (1249)
T ss_dssp ECCBCCSSCEEEE---EECSSSEE-EEEESS------SEEEEEETTTTCCCEEEECCSSC----CCCEEECSSSSSCEEE
T ss_pred EEEecCCCcEEEE---EEcCCCcE-EEEECC------CcEEEEECCCCceeEEEcccCCc----EEEEEECCCCCEEEEE
Confidence 5443211111100 01113333 223222 37888999876542 23322221 1112222 45544444
Q ss_pred ecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcE
Q 017755 261 YYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 261 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
.... .+.+|-++.... +..+.... + ...-+++.++|..++....++.+.+||+++++.
T Consensus 1104 s~d~--~v~iwd~~~~~~------~~~l~~h~--~--~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1104 SADK--TAKIWSFDLLSP------LHELKGHN--G--CVRCSAFSLDGILLATGDDNGEIRIWNVSDGQL 1161 (1249)
T ss_dssp CCSS--CCCEECSSSSSC------SBCCCCCS--S--CEEEEEECSSSSEEEEEETTSCCCEEESSSSCC
T ss_pred cCCC--cEEEEECCCcce------eeeeccCC--C--cEEEEEECCCCCEEEEEeCCCEEEEEECCCCce
Confidence 4333 689998765221 11111101 0 355678889999677767777799999998774
No 103
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=85.80 E-value=19 Score=32.05 Aligned_cols=199 Identities=13% Similarity=0.115 Sum_probs=96.7
Q ss_pred cccce-EEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEc
Q 017755 99 CCHGL-LAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSL 177 (366)
Q Consensus 99 s~nGL-l~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss 177 (366)
+.+|- ++....++.+.|||..+++....-... ......+.+.|..+ + ++.. .....+.+++.
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h----------~~~v~~~~~~p~~~-~-l~s~-----s~d~~v~iwd~ 194 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGH----------EQDIYSLDYFPSGD-K-LVSG-----SGDRTVRIWDL 194 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCC----------SSCEEEEEECTTSS-E-EEEE-----ETTSEEEEEET
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccC----------CCCEEEEEEcCCCC-E-EEEe-----cCCCcEEEEEC
Confidence 34554 444446778999999988765432211 11233456666432 2 2222 12346778888
Q ss_pred CCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCC---CCCeeeEEE
Q 017755 178 KADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGM---KGGFCSQVG 250 (366)
Q Consensus 178 ~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~---~~~~~~~l~ 250 (366)
+++.-...-...... ..+.+ +|.+...+..+ ..|..+|+.+.+.. .+..+... +...-..+.
T Consensus 195 ~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~~~s~d------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 195 RTGQCSLTLSIEDGV-----TTVAVSPGDGKYIAAGSLD------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp TTTEEEEEEECSSCE-----EEEEECSTTCCEEEEEETT------SCEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred CCCeeEEEEEcCCCc-----EEEEEECCCCCEEEEEcCC------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 776543221111110 11211 45555544444 37889999876543 33322211 111122333
Q ss_pred EE-CCEEEEEEecCCCCeEEEEEEeecCCCCC------eeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEE
Q 017755 251 VL-RGCLWINSYYHDEPRCDIWVMKEYGSQQS------WSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWY 323 (366)
Q Consensus 251 ~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~------W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~y 323 (366)
-. +|++.+...... .+.+|-++....... ......+.. .. ....-+++.++|..++-...++.+.+|
T Consensus 264 ~~~~g~~l~s~s~d~--~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~--h~--~~v~~~~~~~~~~~l~sgs~D~~v~iw 337 (393)
T 1erj_A 264 FTRDGQSVVSGSLDR--SVKLWNLQNANNKSDSKTPNSGTCEVTYIG--HK--DFVLSVATTQNDEYILSGSKDRGVLFW 337 (393)
T ss_dssp ECTTSSEEEEEETTS--EEEEEEC---------------CEEEEEEC--CS--SCEEEEEECGGGCEEEEEETTSEEEEE
T ss_pred ECCCCCEEEEEeCCC--EEEEEECCCCCCcccccCCCCCcceEEEec--cc--CcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 33 465555444333 799999875321100 001111110 00 024456777888866666677789999
Q ss_pred ECCCCcEE
Q 017755 324 NLKDHKQD 331 (366)
Q Consensus 324 dl~t~~~~ 331 (366)
|+++++..
T Consensus 338 d~~~~~~~ 345 (393)
T 1erj_A 338 DKKSGNPL 345 (393)
T ss_dssp ETTTCCEE
T ss_pred ECCCCeEE
Confidence 99998753
No 104
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=85.42 E-value=17 Score=31.18 Aligned_cols=54 Identities=9% Similarity=0.215 Sum_probs=33.5
Q ss_pred eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCC----CeEEEEEcCCeEEEEECCC
Q 017755 267 RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDG----DKALIYQHSRCLHWYNLKD 327 (366)
Q Consensus 267 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g----~~i~l~~~~~~l~~ydl~t 327 (366)
.+.||.++. ...|..+..+....- ...-+++.+++ ..++-...++.+.+||+++
T Consensus 190 ~v~lWd~~~---~~~~~~~~~l~~h~~----~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 190 LIKLWKEEE---DGQWKEEQKLEAHSD----WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp BCCEEEECT---TSCEEEEECCBCCSS----CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred eEEEEEeCC---CCccceeeecccCCC----ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 799999863 245765554332111 34456677765 5455555677799999876
No 105
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=85.37 E-value=19 Score=31.74 Aligned_cols=190 Identities=8% Similarity=-0.014 Sum_probs=92.4
Q ss_pred ccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCC
Q 017755 100 CHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKA 179 (366)
Q Consensus 100 ~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~ 179 (366)
.+|.++.....+.+.+||..+++....-... ......+.+.|... + ++ ... ..-.+.+|+..+
T Consensus 216 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~----------~~~i~~~~~~~~~~-~-l~-~~~----~d~~i~i~d~~~ 278 (425)
T 1r5m_A 216 DDDKFVIPGPKGAIFVYQITEKTPTGKLIGH----------HGPISVLEFNDTNK-L-LL-SAS----DDGTLRIWHGGN 278 (425)
T ss_dssp ETTEEEEECGGGCEEEEETTCSSCSEEECCC----------SSCEEEEEEETTTT-E-EE-EEE----TTSCEEEECSSS
T ss_pred CCCEEEEEcCCCeEEEEEcCCCceeeeeccC----------CCceEEEEECCCCC-E-EE-EEc----CCCEEEEEECCC
Confidence 3566655556678999998887543221111 11233455665432 2 22 221 233467777765
Q ss_pred CcEE-ecCCCCceeecCCCCce--EECCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEE-CC
Q 017755 180 DTWR-RTREFPYYILDDRCNGV--FIAGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVL-RG 254 (366)
Q Consensus 180 ~~W~-~~~~~p~~~~~~~~~~v--~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~-~G 254 (366)
+.-. .+....... ..+ .-+| ....+..+ ..|..+|+.+.+... +..... ....+... +|
T Consensus 279 ~~~~~~~~~~~~~i-----~~~~~~~~~-~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~~ 342 (425)
T 1r5m_A 279 GNSQNCFYGHSQSI-----VSASWVGDD-KVISCSMD------GSVRLWSLKQNTLLALSIVDGV----PIFAGRISQDG 342 (425)
T ss_dssp BSCSEEECCCSSCE-----EEEEEETTT-EEEEEETT------SEEEEEETTTTEEEEEEECTTC----CEEEEEECTTS
T ss_pred CccceEecCCCccE-----EEEEECCCC-EEEEEeCC------CcEEEEECCCCcEeEecccCCc----cEEEEEEcCCC
Confidence 4211 111100000 112 2245 33333333 389999998766433 232221 12223222 46
Q ss_pred EEEEEEecCCCCeEEEEEEeecCC---------CCCe-----eEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeE
Q 017755 255 CLWINSYYHDEPRCDIWVMKEYGS---------QQSW-----SKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCL 320 (366)
Q Consensus 255 ~L~~v~~~~~~~~l~iW~l~~~~~---------~~~W-----~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l 320 (366)
++.++..... .+.+|.++.... ...| ..+..+....- .....-+.+.++|..++....++.+
T Consensus 343 ~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i 418 (425)
T 1r5m_A 343 QKYAVAFMDG--QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD--NDYIFDLSWNCAGNKISVAYSLQEG 418 (425)
T ss_dssp SEEEEEETTS--CEEEEECHHHHC--------------CEECCEEEEECCTTC--CCCEEEEEECTTSSEEEEEESSSCC
T ss_pred CEEEEEECCC--eEEEEECCCCccceeeeecccccccCcccchhhhhhcCccc--CCceEEEEccCCCceEEEEecCceE
Confidence 6555555444 799999875320 0011 12333332210 0024557778889867677777779
Q ss_pred EEEECC
Q 017755 321 HWYNLK 326 (366)
Q Consensus 321 ~~ydl~ 326 (366)
.+||++
T Consensus 419 ~iw~~~ 424 (425)
T 1r5m_A 419 SVVAIP 424 (425)
T ss_dssp EEEECC
T ss_pred EEEeec
Confidence 999986
No 106
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=85.21 E-value=15 Score=33.05 Aligned_cols=115 Identities=17% Similarity=0.182 Sum_probs=70.2
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEEE---CC-----------CCCCCCCeeeEEEEE--CCEEEEEEecC---
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYEV---QQ-----------PHGMKGGFCSQVGVL--RGCLWINSYYH--- 263 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i---~~-----------P~~~~~~~~~~l~~~--~G~L~~v~~~~--- 263 (366)
+|+++|....+ .+.++|+.++.-..+ .+ |.+. . .++.. +++||+.....
T Consensus 237 dG~~~~vs~~g-------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~----q-~~a~~~~~~~lyV~~~~~~~~ 304 (386)
T 3sjl_D 237 AGRLVWPTYTG-------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW----Q-QVAYHRALDRIYLLVDQRDEW 304 (386)
T ss_dssp TTEEEEEBTTS-------EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS----S-CEEEETTTTEEEEEEEECCTT
T ss_pred CCcEEEEeCCC-------EEEEEECCCCcceeecceeccccccccccccCCCc----c-eeeECCCCCeEEEEecccccc
Confidence 78899977643 699999987754332 10 1111 1 23333 46888875421
Q ss_pred --CCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCC-eEEEEEc-CCeEEEEECCCCcE-EEEEEecC
Q 017755 264 --DEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGD-KALIYQH-SRCLHWYNLKDHKQ-DVIEIRNE 338 (366)
Q Consensus 264 --~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~-~i~l~~~-~~~l~~ydl~t~~~-~~v~~~~~ 338 (366)
....=+||+++- .++..+.+|.... ...-+++.++|+ .+|.... +..+.+||..|++. +.+...+.
T Consensus 305 ~hk~~~~~V~viD~----~t~kv~~~i~vg~-----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~ 375 (386)
T 3sjl_D 305 RHKTASRFVVVLDA----KTGERLAKFEMGH-----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGH 375 (386)
T ss_dssp CTTSCEEEEEEEET----TTCCEEEEEEEEE-----EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCS
T ss_pred ccCCCCCEEEEEEC----CCCeEEEEEECCC-----CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCC
Confidence 111368999995 4566677776543 244588889986 4555333 45699999999985 44444444
No 107
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=85.09 E-value=26 Score=33.06 Aligned_cols=195 Identities=12% Similarity=-0.015 Sum_probs=101.7
Q ss_pred ccceEEeee-cCceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEc
Q 017755 100 CHGLLAMFN-RRLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSL 177 (366)
Q Consensus 100 ~nGLl~~~~-~~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss 177 (366)
-+|.+++.+ ..+.+.|+|+.|++... ++... . ...+.++|.. +|-++. . ..-.+.+|+.
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~----------~--~~~v~~spdg-~~l~v~--~----~d~~V~v~D~ 207 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY----------A--VHISRMSASG-RYLLVI--G----RDARIDMIDL 207 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECST----------T--EEEEEECTTS-CEEEEE--E----TTSEEEEEET
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCc----------c--cceEEECCCC-CEEEEE--C----CCCeEEEEEC
Confidence 356665554 45689999999988643 33211 1 2356666643 332222 1 1256888888
Q ss_pred --CCCcEEecCCCCceeecCCCCceEE------CCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCC-C-----
Q 017755 178 --KADTWRRTREFPYYILDDRCNGVFI------AGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGM-K----- 242 (366)
Q Consensus 178 --~~~~W~~~~~~p~~~~~~~~~~v~~------~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~-~----- 242 (366)
.+++- +..++.+... .++.+ +|+.-+.+.... ..|.++|..+.+. ..++.+... .
T Consensus 208 ~~~t~~~--~~~i~~g~~p---~~va~sp~~~~dg~~l~v~~~~~-----~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~ 277 (543)
T 1nir_A 208 WAKEPTK--VAEIKIGIEA---RSVESSKFKGYEDRYTIAGAYWP-----PQFAIMDGETLEPKQIVSTRGMTVDTQTYH 277 (543)
T ss_dssp TSSSCEE--EEEEECCSEE---EEEEECCSTTCTTTEEEEEEEES-----SEEEEEETTTCCEEEEEECCEECSSSCCEE
T ss_pred cCCCCcE--EEEEecCCCc---ceEEeCCCcCCCCCEEEEEEccC-----CeEEEEeccccccceeecccCcccCccccc
Confidence 55432 2222211100 12222 576555555432 3789999987655 334442110 0
Q ss_pred -CCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCe
Q 017755 243 -GGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRC 319 (366)
Q Consensus 243 -~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~ 319 (366)
...-..+... +|...++...... .+.+|-..+. +. .++..+..... ..-+++.++|+.++.... +..
T Consensus 278 ~~~~v~~i~~s~~~~~~~vs~~~~g-~i~vvd~~~~--~~--l~~~~i~~~~~-----~~~~~~spdg~~l~va~~~~~~ 347 (543)
T 1nir_A 278 PEPRVAAIIASHEHPEFIVNVKETG-KVLLVNYKDI--DN--LTVTSIGAAPF-----LHDGGWDSSHRYFMTAANNSNK 347 (543)
T ss_dssp SCCCEEEEEECSSSSEEEEEETTTT-EEEEEECTTS--SS--CEEEEEECCSS-----CCCEEECTTSCEEEEEEGGGTE
T ss_pred cCCceEEEEECCCCCEEEEEECCCC-eEEEEEecCC--Cc--ceeEEeccCcC-----ccCceECCCCCEEEEEecCCCe
Confidence 0012233333 2544555554333 6666655542 11 12334443332 334788899997766653 456
Q ss_pred EEEEECCCCcEEEE
Q 017755 320 LHWYNLKDHKQDVI 333 (366)
Q Consensus 320 l~~ydl~t~~~~~v 333 (366)
+.++|.+++++...
T Consensus 348 v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 348 VAVIDSKDRRLSAL 361 (543)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEECCCCeEEEe
Confidence 99999999987554
No 108
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=85.05 E-value=16 Score=30.75 Aligned_cols=205 Identities=10% Similarity=0.027 Sum_probs=103.8
Q ss_pred EEecccc-eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEE
Q 017755 96 VIGCCHG-LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVII 174 (366)
Q Consensus 96 ~~~s~nG-Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~v 174 (366)
..+..+. |+........++.+||.++ ...+.... ....++.+++... ++... .....+.+
T Consensus 34 ~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~-----------~~~~~l~~~~dg~---l~v~~----~~~~~i~~ 94 (296)
T 3e5z_A 34 VYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPS-----------HHQNGHCLNKQGH---LIACS----HGLRRLER 94 (296)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSC-----------SSEEEEEECTTCC---EEEEE----TTTTEEEE
T ss_pred eEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCC-----------CCcceeeECCCCc---EEEEe----cCCCeEEE
Confidence 3344444 4544445678999999998 55543321 1134677776432 22221 12346788
Q ss_pred EEcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEee-C----------CCCCCcceEEEEECCCceeEEECCCCCC
Q 017755 175 YSLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAAR-G----------SVRTGQNMILAFDLKSEKFYEVQQPHGM 241 (366)
Q Consensus 175 yss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~-~----------~~~~~~~~i~~fD~~~e~~~~i~~P~~~ 241 (366)
|+..+++.+.+..............+.+ +|.+|+.... + ........|..+|.. .+...+.-...
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~- 172 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV- 172 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS-
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC-
Confidence 8887877765532111111111122333 6777664210 0 000011378999987 55554422111
Q ss_pred CCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCe-eEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCe
Q 017755 242 KGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSW-SKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRC 319 (366)
Q Consensus 242 ~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~ 319 (366)
....++.. +|++. +...... .+.+|.++. .... .....+. .. .+ ...-+++.++|. +++.. ...
T Consensus 173 ---~~~gi~~s~dg~~l-v~~~~~~-~i~~~~~~~---~g~~~~~~~~~~-~~-~~--~p~~i~~d~~G~-l~v~~-~~~ 238 (296)
T 3e5z_A 173 ---KPNGLAFLPSGNLL-VSDTGDN-ATHRYCLNA---RGETEYQGVHFT-VE-PG--KTDGLRVDAGGL-IWASA-GDG 238 (296)
T ss_dssp ---SEEEEEECTTSCEE-EEETTTT-EEEEEEECS---SSCEEEEEEEEC-CS-SS--CCCSEEEBTTSC-EEEEE-TTE
T ss_pred ---CCccEEECCCCCEE-EEeCCCC-eEEEEEECC---CCcCcCCCeEee-CC-CC--CCCeEEECCCCC-EEEEc-CCe
Confidence 11223333 46665 4443322 677777763 2334 3233331 11 10 122267778887 77777 667
Q ss_pred EEEEECCCCcEEEEEE
Q 017755 320 LHWYNLKDHKQDVIEI 335 (366)
Q Consensus 320 l~~ydl~t~~~~~v~~ 335 (366)
+..||++.+..+.+..
T Consensus 239 v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 239 VHVLTPDGDELGRVLT 254 (296)
T ss_dssp EEEECTTSCEEEEEEC
T ss_pred EEEECCCCCEEEEEEC
Confidence 9999998776666643
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=84.91 E-value=26 Score=34.46 Aligned_cols=97 Identities=14% Similarity=0.237 Sum_probs=60.2
Q ss_pred eEEEEECCCceeEEE-CCCCCCCCCeeeEEEEE-C--CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCc
Q 017755 221 MILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVL-R--GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETC 296 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~-~--G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 296 (366)
.|..+|+.++++..+ .+..+. .....+.-. + |.+.+.....+ .+.+|-++. ..|.....+....-
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~--~~V~~l~~s~~~~~~~l~s~s~Dg--~I~vwd~~~----~~~~~~~~~~~h~~--- 100 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFGTILASCSYDG--KVLIWKEEN----GRWSQIAVHAVHSA--- 100 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCS--SCEEEEEECCTTSCSEEEEEETTS--CEEEEEEET----TEEEEEEEECCCSS---
T ss_pred cEEEEecCCCCCccceeccCCc--CceEEEEecCCCCCCEEEEEeCCC--eEEEEECCC----CcccccccccCCCC---
Confidence 788888886666544 222221 112233332 2 55555555444 799999885 34666665543221
Q ss_pred ceeEEEEEEeC--CCeEEEEEcCCeEEEEECCCCc
Q 017755 297 YYTEAFAFSKD--GDKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 297 ~~~~~~~~~~~--g~~i~l~~~~~~l~~ydl~t~~ 329 (366)
...-+.+.++ |+.++....++.+.+||++++.
T Consensus 101 -~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 101 -SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp -CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred -CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 3555777787 8877777777889999999884
No 110
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=84.84 E-value=17 Score=30.76 Aligned_cols=145 Identities=6% Similarity=0.003 Sum_probs=81.3
Q ss_pred ceeEEEEEEcCCCcEEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCee
Q 017755 168 DYLEVIIYSLKADTWRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFC 246 (366)
Q Consensus 168 ~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~ 246 (366)
....+.+++..+++=.....++...+.. .-...++.+|-+.... ..+.+||..+.+- ..++.|...
T Consensus 63 g~S~v~~vD~~Tgkv~~~~~l~~~~Fge--Git~~g~~ly~ltw~~------~~v~v~D~~t~~~~~ti~~~~eG----- 129 (262)
T 3nol_A 63 GRSSIRKVDIESGKTLQQIELGKRYFGE--GISDWKDKIVGLTWKN------GLGFVWNIRNLRQVRSFNYDGEG----- 129 (262)
T ss_dssp TEEEEEEECTTTCCEEEEEECCTTCCEE--EEEEETTEEEEEESSS------SEEEEEETTTCCEEEEEECSSCC-----
T ss_pred CCceEEEEECCCCcEEEEEecCCcccee--EEEEeCCEEEEEEeeC------CEEEEEECccCcEEEEEECCCCc-----
Confidence 4568889999887543322233222111 1234577888887765 4899999987554 556665422
Q ss_pred eEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCc-ceeEEEEEEeCCCeEEEEEc-CCeEEEEE
Q 017755 247 SQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETC-YYTEAFAFSKDGDKALIYQH-SRCLHWYN 324 (366)
Q Consensus 247 ~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~-~~~~~~~~~~~g~~i~l~~~-~~~l~~yd 324 (366)
..++..+++|++... . =.||+++.. +=..+.+|....-... ....-+.+. +|. |+.... ...+.+.|
T Consensus 130 ~glt~dg~~L~~SdG--s---~~i~~iDp~----T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vID 198 (262)
T 3nol_A 130 WGLTHNDQYLIMSDG--T---PVLRFLDPE----SLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQTNKIVRID 198 (262)
T ss_dssp CCEEECSSCEEECCS--S---SEEEEECTT----TCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTSSEEEEEC
T ss_pred eEEecCCCEEEEECC--C---CeEEEEcCC----CCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEccCCeEEEEE
Confidence 234444567777653 2 257888752 1223444443210000 011223333 665 887764 44699999
Q ss_pred CCCCcEE-EEEEe
Q 017755 325 LKDHKQD-VIEIR 336 (366)
Q Consensus 325 l~t~~~~-~v~~~ 336 (366)
++|+++. .+.+.
T Consensus 199 p~tG~V~~~Id~~ 211 (262)
T 3nol_A 199 PETGKVTGIIDLN 211 (262)
T ss_dssp TTTCBEEEEEECT
T ss_pred CCCCcEEEEEECC
Confidence 9999974 44553
No 111
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=83.77 E-value=36 Score=33.62 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=59.3
Q ss_pred ceEECC-eEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeec
Q 017755 199 GVFIAG-ALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEY 276 (366)
Q Consensus 199 ~v~~~G-~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~ 276 (366)
+++.+. --.|++.... .|..||..+.+++.+..|..........+.+. +|.|.+.+.. =.|+.++..
T Consensus 367 ~i~~d~~g~lWigt~~~------Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~-----~Gl~~~~~~ 435 (781)
T 3v9f_A 367 SVCDDGQGKLWIGTDGG------GINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYL-----GNISYYNTR 435 (781)
T ss_dssp EEEECTTSCEEEEEBSS------CEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETT-----EEEEEECSS
T ss_pred EEEEcCCCCEEEEeCCC------cEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEecc-----CCEEEEcCC
Confidence 344432 3356666442 69999999888876533322222223455554 5788875432 134444431
Q ss_pred CCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 277 GSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 277 ~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
...+.. +....+.. .....+...++|. +++... ..++.||+++++++.+
T Consensus 436 --~~~~~~---~~~~~~~~-~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 436 --LKKFQI---IELEKNEL-LDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHH 484 (781)
T ss_dssp --SCEEEE---CCSTTTCC-CCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEE
T ss_pred --CCcEEE---eccCCCCC-CeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEec
Confidence 122322 22211111 1222233334454 777766 5699999999887665
No 112
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=83.60 E-value=20 Score=30.66 Aligned_cols=115 Identities=12% Similarity=0.174 Sum_probs=62.9
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCC
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQS 281 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~ 281 (366)
+|.+||..... ..|..+|+.+.++..+..+... .-..+... +|+|++.........-.|+.++..+ ..
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~---~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~--~~ 123 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVSHKA---NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG--DN 123 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEECSSS---SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS--CS
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeCCCC---CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC--CE
Confidence 68888876544 3799999998888765321111 12344443 5888877654310012455554321 11
Q ss_pred eeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-------CeEEEEECCCCcEEEE
Q 017755 282 WSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-------RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 282 W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-------~~l~~ydl~t~~~~~v 333 (366)
-... +.... .. ....-+.+.++|. +++.... ..++.+|+++++.+.+
T Consensus 124 ~~~~--~~~~~-~~-~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 124 LQDI--IEDLS-TA-YCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CEEE--ECSSS-SC-CCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEEE--EccCc-cC-CcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 1111 11110 11 1244467777887 6666542 3599999988877665
No 113
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=83.14 E-value=23 Score=30.96 Aligned_cols=190 Identities=6% Similarity=-0.045 Sum_probs=87.8
Q ss_pred cccceEEe-eecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEc
Q 017755 99 CCHGLLAM-FNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSL 177 (366)
Q Consensus 99 s~nGLl~~-~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss 177 (366)
+.+|-.++ ...++.+.+||..+++....-... ......+.+.+.... .++... ..-.+.+|+.
T Consensus 136 spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h----------~~~V~~~~~~~~~~~-~l~s~s-----~D~~v~iwd~ 199 (344)
T 4gqb_B 136 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAH----------AAQVTCVAASPHKDS-VFLSCS-----EDNRILLWDT 199 (344)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCC----------SSCEEEEEECSSCTT-EEEEEE-----TTSCEEEEET
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCc----------CCceEEEEecCCCCC-ceeeec-----cccccccccc
Confidence 34554433 345678999999998865432211 111223455544333 222221 2234677888
Q ss_pred CCCcEEe-cCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCeeeEEEEE
Q 017755 178 KADTWRR-TREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFCSQVGVL 252 (366)
Q Consensus 178 ~~~~W~~-~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~l~~~ 252 (366)
++++-.. +...... .....+.. ++.+...+..+ ..|-.+|+.+.+. ..+..... ....+.-.
T Consensus 200 ~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~l~sg~~d------g~v~~wd~~~~~~~~~~~~h~~----~v~~v~fs 266 (344)
T 4gqb_B 200 RCPKPASQIGCSAPG---YLPTSLAWHPQQSEVFVFGDEN------GTVSLVDTKSTSCVLSSAVHSQ----CVTGLVFS 266 (344)
T ss_dssp TSSSCEEECC----C---CCEEEEEECSSCTTEEEEEETT------SEEEEEESCC--CCEEEECCSS----CEEEEEEC
T ss_pred cccceeeeeecceee---ccceeeeecCCCCcceEEeccC------CcEEEEECCCCcEEEEEcCCCC----CEEEEEEc
Confidence 7654322 2110000 00012222 23333333333 3688889887653 22332211 12233322
Q ss_pred -CC-EEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEE-EcCCeEEEEECCCCc
Q 017755 253 -RG-CLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIY-QHSRCLHWYNLKDHK 329 (366)
Q Consensus 253 -~G-~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~-~~~~~l~~ydl~t~~ 329 (366)
+| ++.+...... .+.||-+.. . . +.... .... ...-+++.++|+.++.. ..++.+.+|++.++.
T Consensus 267 p~g~~~lasgs~D~--~i~vwd~~~----~--~-~~~~~--~H~~--~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 267 PHSVPFLASLSEDC--SLAVLDSSL----S--E-LFRSQ--AHRD--FVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp SSSSCCEEEEETTS--CEEEECTTC----C--E-EEEEC--CCSS--CEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred cCCCeEEEEEeCCC--eEEEEECCC----C--c-EEEEc--CCCC--CEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 34 3333333333 799996542 1 1 22221 1111 35557788888756654 456779999998875
Q ss_pred E
Q 017755 330 Q 330 (366)
Q Consensus 330 ~ 330 (366)
+
T Consensus 334 ~ 334 (344)
T 4gqb_B 334 L 334 (344)
T ss_dssp -
T ss_pred C
Confidence 4
No 114
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=82.62 E-value=20 Score=29.90 Aligned_cols=190 Identities=13% Similarity=0.165 Sum_probs=97.5
Q ss_pred cccceEEeeec--CceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEE
Q 017755 99 CCHGLLAMFNR--RLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYS 176 (366)
Q Consensus 99 s~nGLl~~~~~--~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vys 176 (366)
..+|.+.+.+. ...+.++|+..+....+...... ...++.+|+.. + ++.. . .....+.+|+
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~----------~~~~i~~~~~g-~--l~v~-~---~~~~~i~~~~ 148 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQ----------HPRGVTVDNKG-R--IIVV-E---CKVMRVIIFD 148 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCS----------CEEEEEECTTS-C--EEEE-E---TTTTEEEEEC
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCC----------CceEEEEeCCC-C--EEEE-E---CCCCEEEEEc
Confidence 45677666542 57899999665554445332211 23467777743 2 2221 1 1234566677
Q ss_pred cCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-C
Q 017755 177 LKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-R 253 (366)
Q Consensus 177 s~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~ 253 (366)
.....-+....... . ....++.+ +|.+|...... ..|..||...+....+..+.... .-..++.. +
T Consensus 149 ~~g~~~~~~~~~~~-~--~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~g~~~--~p~~i~~d~~ 217 (286)
T 1q7f_A 149 QNGNVLHKFGCSKH-L--EFPNGVVVNDKQEIFISDNRA------HCVKVFNYEGQYLRQIGGEGITN--YPIGVGINSN 217 (286)
T ss_dssp TTSCEEEEEECTTT-C--SSEEEEEECSSSEEEEEEGGG------TEEEEEETTCCEEEEESCTTTSC--SEEEEEECTT
T ss_pred CCCCEEEEeCCCCc-c--CCcEEEEECCCCCEEEEECCC------CEEEEEcCCCCEEEEEccCCccC--CCcEEEECCC
Confidence 65443333211000 0 00123443 47876654433 38999999877666665432221 12234443 5
Q ss_pred CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCC
Q 017755 254 GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKD 327 (366)
Q Consensus 254 G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t 327 (366)
|.|++....... .+.+|..+ ..-........... ...-+++.++|. +++...+..+.+|+...
T Consensus 218 G~l~v~~~~~~~-~i~~~~~~-----g~~~~~~~~~~~~~----~~~~i~~~~~g~-l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 218 GEILIADNHNNF-NLTIFTQD-----GQLISALESKVKHA----QCFDVALMDDGS-VVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp CCEEEEECSSSC-EEEEECTT-----SCEEEEEEESSCCS----CEEEEEEETTTE-EEEEETTTEEEEEECSC
T ss_pred CCEEEEeCCCCE-EEEEECCC-----CCEEEEEcccCCCC----cceeEEECCCCc-EEEECCCCeEEEEEccc
Confidence 888887754321 57777422 22222222211110 234467778887 77766666688888754
No 115
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=82.35 E-value=41 Score=33.27 Aligned_cols=147 Identities=10% Similarity=0.155 Sum_probs=77.5
Q ss_pred EEEEEEcCCCcEEecCCCC---ceeecCCCCceEEC-CeEEEEEeeCCCCCCcceEEEEECCCceeEEECCC----CCCC
Q 017755 171 EVIIYSLKADTWRRTREFP---YYILDDRCNGVFIA-GALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQP----HGMK 242 (366)
Q Consensus 171 ~~~vyss~~~~W~~~~~~p---~~~~~~~~~~v~~~-G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P----~~~~ 242 (366)
.+..|+..+++++.....+ .......-..++.+ .--.|++... .|..+|..+.+|..+... ....
T Consensus 236 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-------Gl~~~~~~~~~~~~~~~~~~~~~~l~ 308 (795)
T 4a2l_A 236 GLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-------DLNIYHEGTDSFASYSSNPVENGSLS 308 (795)
T ss_dssp CEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-------CEEEEETTTTEEEEECCCTTSTTSCS
T ss_pred CeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-------hhheEcCCCCeEEEEecCCCCCCCCC
Confidence 4667888888777654211 11111111133332 3446776653 588999999999887432 1222
Q ss_pred CCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecC-CCCCCcceeEEEEEEeCCCeEEEEEcCCeE
Q 017755 243 GGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSK-MLHETCYYTEAFAFSKDGDKALIYQHSRCL 320 (366)
Q Consensus 243 ~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l 320 (366)
......+.+. +|.|.+.+...+ +..+-.+. ..+........ ..+.. ....-+...++|. +.+...+..+
T Consensus 309 ~~~i~~i~~D~~g~lWigt~~~G---l~~~~~~~----~~~~~~~~~~~~~~l~~-~~V~~i~~d~~g~-lWiGt~~~Gl 379 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWLGTYFGG---LNYYHPIR----NRFKNIRNIPYKNSLSD-NVVSCIVEDKDKN-LWIGTNDGGL 379 (795)
T ss_dssp SSCEEEEEECTTSCEEEEESSSC---EEEECGGG----GSSEEECCCTTSSSCSC-SSEEEEEECTTSC-EEEEESSSCE
T ss_pred CCcEEEEEEeCCcCEEEEECCCC---eEEeCCCc----ccceEEcCCCCCCCCCC-CeeEEEEECCCCC-EEEEECCCCe
Confidence 2223344444 478887665332 44443221 23432221111 11111 1233344445666 8887776569
Q ss_pred EEEECCCCcEEEE
Q 017755 321 HWYNLKDHKQDVI 333 (366)
Q Consensus 321 ~~ydl~t~~~~~v 333 (366)
..||.++++++..
T Consensus 380 ~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 380 NLYNPITQRFTSY 392 (795)
T ss_dssp EEECTTTCCEEEE
T ss_pred EEEcCCCCcEEEE
Confidence 9999999988766
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=82.26 E-value=23 Score=30.36 Aligned_cols=199 Identities=8% Similarity=0.029 Sum_probs=92.5
Q ss_pred cc-eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCC
Q 017755 101 HG-LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKA 179 (366)
Q Consensus 101 nG-Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~ 179 (366)
+| +|+....++.+.+||..+++...+..... . ...+.+.+..+.-.++. .. ..-.+.+|+.++
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---------~--v~~~~~~~~~~~~~l~~-~~----~dg~i~vwd~~~ 160 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIAQHDA---------P--VKTIHWIKAPNYSCVMT-GS----WDKTLKFWDTRS 160 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSS---------C--EEEEEEEECSSCEEEEE-EE----TTSEEEEECSSC
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeeccccC---------c--eEEEEEEeCCCCCEEEE-cc----CCCcEEEEECCC
Confidence 44 44444567789999999988776432211 1 22344422222222222 21 234577788766
Q ss_pred CcEEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCcee--EEECCCCCCCCCeeeEEEEECC--E
Q 017755 180 DTWRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKF--YEVQQPHGMKGGFCSQVGVLRG--C 255 (366)
Q Consensus 180 ~~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~--~~i~~P~~~~~~~~~~l~~~~G--~ 255 (366)
+.-...-..+. ....+...+....++..+ ..+..+|+.+..- ..+..+..... ....+..... .
T Consensus 161 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 228 (368)
T 3mmy_A 161 SNPMMVLQLPE-----RCYCADVIYPMAVVATAE------RGLIVYQLENQPSEFRRIESPLKHQH-RCVAIFKDKQNKP 228 (368)
T ss_dssp SSCSEEEECSS-----CEEEEEEETTEEEEEEGG------GCEEEEECSSSCEEEEECCCSCSSCE-EEEEEEECTTSCE
T ss_pred CcEEEEEecCC-----CceEEEecCCeeEEEeCC------CcEEEEEeccccchhhhccccccCCC-ceEEEcccCCCCC
Confidence 53111000010 001222223333344333 3688888876543 33333332211 1111111111 1
Q ss_pred EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCC-------CCc-ceeEEEEEEeCCCeEEEEEcCCeEEEEECCC
Q 017755 256 LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLH-------ETC-YYTEAFAFSKDGDKALIYQHSRCLHWYNLKD 327 (366)
Q Consensus 256 L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-------~~~-~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t 327 (366)
-.++...... .+.+|.++.... -.....+..... ... ....-+++.++|..++....++.+.+||+++
T Consensus 229 ~~~~~~~~dg-~i~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 229 TGFALGSIEG-RVAIHYINPPNP---AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp EEEEEEETTS-EEEEEESSCSCH---HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred CeEEEecCCC-cEEEEecCCCCc---cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC
Confidence 1133333332 799999875311 001111111100 000 0244567788888676666777799999998
Q ss_pred CcEE
Q 017755 328 HKQD 331 (366)
Q Consensus 328 ~~~~ 331 (366)
++..
T Consensus 305 ~~~~ 308 (368)
T 3mmy_A 305 RTKL 308 (368)
T ss_dssp TEEE
T ss_pred CcEE
Confidence 8653
No 117
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=82.11 E-value=26 Score=30.94 Aligned_cols=195 Identities=8% Similarity=0.031 Sum_probs=101.3
Q ss_pred ccc-eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 100 CHG-LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 100 ~nG-Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
.+| ++......+.+.+||..+++....-.... .....+.+.|.. + .++... ....+.+|+..
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~----------~~v~~~~~~~~~-~--~l~s~s----~d~~i~iwd~~ 169 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV----------SEITKLKFFPSG-E--ALISSS----QDMQLKIWSVK 169 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCEEEEETTSSS----------SCEEEEEECTTS-S--EEEEEE----TTSEEEEEETT
T ss_pred cCCCEEEEEECCCCEEEEeCCCcceeeeccccc----------CccEEEEECCCC-C--EEEEEe----CCCeEEEEeCC
Confidence 344 44445567789999999888766532211 123356666642 2 222221 23467888887
Q ss_pred CCcE-EecCCCCceeecCCCCce--EECCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEE---
Q 017755 179 ADTW-RRTREFPYYILDDRCNGV--FIAGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGV--- 251 (366)
Q Consensus 179 ~~~W-~~~~~~p~~~~~~~~~~v--~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~--- 251 (366)
++.= +.+..-.... ..+ .-+|.....+..+ ..|..+|+.+.+.. .+..+...... ...+..
T Consensus 170 ~~~~~~~~~~h~~~v-----~~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~-v~~~~~~~~ 237 (420)
T 3vl1_A 170 DGSNPRTLIGHRATV-----TDIAIIDRGRNVLSASLD------GTIRLWECGTGTTIHTFNRKENPHDG-VNSIALFVG 237 (420)
T ss_dssp TCCCCEEEECCSSCE-----EEEEEETTTTEEEEEETT------SCEEEEETTTTEEEEEECBTTBTTCC-EEEEEEEEC
T ss_pred CCcCceEEcCCCCcE-----EEEEEcCCCCEEEEEcCC------CcEEEeECCCCceeEEeecCCCCCCC-ccEEEEecC
Confidence 6421 1111000000 111 1145544444443 36889999876543 33433222111 111111
Q ss_pred -------------------ECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCC-eE
Q 017755 252 -------------------LRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGD-KA 311 (366)
Q Consensus 252 -------------------~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~-~i 311 (366)
-+|++.++..... .+.+|-+... .....+....- ....-+.+.++|. .+
T Consensus 238 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~------~~~~~~~~~~~---~~v~~~~~~~~~~~~l 306 (420)
T 3vl1_A 238 TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG--VITVHNVFSK------EQTIQLPSKFT---CSCNSLTVDGNNANYI 306 (420)
T ss_dssp CCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS--CEEEEETTTC------CEEEEECCTTS---SCEEEEEECSSCTTEE
T ss_pred CcceeeecccCcccceEEcCCCCEEEEEcCCC--eEEEEECCCC------ceeEEcccccC---CCceeEEEeCCCCCEE
Confidence 1455555555444 6999988642 12333322111 0355677888887 66
Q ss_pred EEEEcCCeEEEEECCCCc--EEEEE
Q 017755 312 LIYQHSRCLHWYNLKDHK--QDVIE 334 (366)
Q Consensus 312 ~l~~~~~~l~~ydl~t~~--~~~v~ 334 (366)
+....++.+.+||+++++ +..+.
T Consensus 307 ~~g~~dg~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 307 YAGYENGMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp EEEETTSEEEEEETTCTTSCSEEEE
T ss_pred EEEeCCCeEEEEEcCCCcCchhhhh
Confidence 666777789999999875 34443
No 118
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=81.77 E-value=24 Score=30.26 Aligned_cols=68 Identities=7% Similarity=0.065 Sum_probs=40.1
Q ss_pred CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCC
Q 017755 254 GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKD 327 (366)
Q Consensus 254 G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t 327 (366)
|++.++..... .+.+|-++... ........+....... ...-+++.++|+.++....++.+.+||+.+
T Consensus 299 ~~~l~~~~~dg--~i~vwd~~~~~--~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQVG--KLYVWDLEVED--PHKAKCTTLTHHKCGA--AIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECTTS--CEEEEECCSSS--GGGCEEEEECCTTCCS--CEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEecCC--cEEEEECCCCC--CccccceEEcccccCC--ceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 55555554434 79999998632 1122333333321111 355578888999777777777899999864
No 119
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=81.76 E-value=23 Score=29.94 Aligned_cols=67 Identities=9% Similarity=0.126 Sum_probs=39.2
Q ss_pred EEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCC---CeEEEEEcCCeEEEEECCCCc
Q 017755 255 CLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDG---DKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 255 ~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g---~~i~l~~~~~~l~~ydl~t~~ 329 (366)
++.+...... .+.||-++.. ...|.....+....- ...-+.+.+++ ..+.-...++.+.+||++++.
T Consensus 171 ~~l~sgs~D~--~v~lwd~~~~--~~~~~~~~~l~~H~~----~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 171 RKFVTGGADN--LVKIWKYNSD--AQTYVLESTLEGHSD----WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp CEEEEEETTS--CEEEEEEETT--TTEEEEEEEECCCSS----CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred ceEEEEcCCC--cEEEEEEcCC--CceEEEEEEecCCCC----ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 3444444333 7999998752 345665555432111 35557777774 434444556679999998753
No 120
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=81.52 E-value=30 Score=31.14 Aligned_cols=33 Identities=12% Similarity=0.177 Sum_probs=20.2
Q ss_pred eEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 299 TEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
....+++++|. ++....++.+.+||+++++.++
T Consensus 403 ~s~~~fspdg~-~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 403 SSLNEFNPMGD-TLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCEEEECTTSS-CEEEECSSEEEECCCC------
T ss_pred EEEEEECCCCC-EEEEEcCCcEEEEECCcCeeeC
Confidence 34456888998 5555666679999999988653
No 121
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=80.98 E-value=19 Score=32.60 Aligned_cols=112 Identities=9% Similarity=0.105 Sum_probs=63.6
Q ss_pred ECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CC-EEEEEEecCCCCeEEEEEEeecCCC
Q 017755 202 IAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RG-CLWINSYYHDEPRCDIWVMKEYGSQ 279 (366)
Q Consensus 202 ~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G-~L~~v~~~~~~~~l~iW~l~~~~~~ 279 (366)
-+|.+||..... ..|..+|+.+.+...+...... .. ++.. +| .|++...... -.||.++..+
T Consensus 140 ~~g~lyv~d~~~------~~I~~id~~~g~~~~~~~~~~~---~~--ia~~~~g~~l~~~d~~~~---~~I~~~d~~~-- 203 (409)
T 3hrp_A 140 GNNTVLAYQRDD------PRVRLISVDDNKVTTVHPGFKG---GK--PAVTKDKQRVYSIGWEGT---HTVYVYMKAS-- 203 (409)
T ss_dssp STTEEEEEETTT------TEEEEEETTTTEEEEEEETCCB---CB--CEECTTSSEEEEEBSSTT---CEEEEEEGGG--
T ss_pred CCCCEEEEecCC------CcEEEEECCCCEEEEeeccCCC---Cc--eeEecCCCcEEEEecCCC---ceEEEEEcCC--
Confidence 368999987654 4899999998877665322111 12 3322 34 4555544322 2777777532
Q ss_pred CCee--EEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 280 QSWS--KLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 280 ~~W~--~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
.|. ....+..... ....-+++.++++.+|+......++.||++++....+
T Consensus 204 -~~~~~~~g~~~~~~~---~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 204 -GWAPTRIGQLGSTFS---GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp -TTCEEEEEECCTTSC---SCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred -CceeEEeeeccchhc---CCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 343 2212211111 1233367777444477765555699999999886655
No 122
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=80.91 E-value=23 Score=29.55 Aligned_cols=96 Identities=13% Similarity=0.147 Sum_probs=54.9
Q ss_pred ceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc
Q 017755 220 NMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY 297 (366)
Q Consensus 220 ~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 297 (366)
..|..+|+.+.+.. .+..... .-..+.-. +|+| +...... .+.+|-++.. + .+..+....-
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~l--~~~~~dg-~v~iwd~~~~----~--~~~~~~~~~~---- 267 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHES----FVYCIKLLPNGDI--VSCGEDR-TVRIWSKENG----S--LKQVITLPAI---- 267 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSCE--EEEETTS-EEEEECTTTC----C--EEEEEECSSS----
T ss_pred CeEEEEECCchhhhhhhhcCCc----eEEEEEEecCCCE--EEEecCC-EEEEEECCCC----c--eeEEEeccCc----
Confidence 37999999876543 3332222 12233333 4543 3332332 7999987642 1 2333332221
Q ss_pred eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 298 YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
...-+.+.++|. ++....++.+.+||++++++...
T Consensus 268 ~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 268 SIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp CEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred eEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 245577788888 66666777799999999886443
No 123
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=80.67 E-value=25 Score=29.78 Aligned_cols=139 Identities=9% Similarity=-0.045 Sum_probs=77.5
Q ss_pred EEEEEcCCCcEEecCCCCceeecCCCCce-EECCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCeeeEE
Q 017755 172 VIIYSLKADTWRRTREFPYYILDDRCNGV-FIAGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFCSQV 249 (366)
Q Consensus 172 ~~vyss~~~~W~~~~~~p~~~~~~~~~~v-~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~l 249 (366)
+.+++.++++=.... ++...+. .++ ..++.+|-+.... ..+.+||.++.+- ..++.+... ..|
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~~Fg---eGit~~g~~Ly~ltw~~------~~v~V~D~~Tl~~~~ti~~~~eG-----wGL 141 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGNIFA---EGLASDGERLYQLTWTE------GLLFTWSGMPPQRERTTRYSGEG-----WGL 141 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTTCCE---EEEEECSSCEEEEESSS------CEEEEEETTTTEEEEEEECSSCC-----CCE
T ss_pred EEEEECCCCcEEeEE-CCCCcce---eEEEEeCCEEEEEEccC------CEEEEEECCcCcEEEEEeCCCce-----eEE
Confidence 777888776322111 2222111 123 4567888887665 4899999998654 556665331 244
Q ss_pred EEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc-eeEEEEEEeCCCeEEEEEc-CCeEEEEECCC
Q 017755 250 GVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY-YTEAFAFSKDGDKALIYQH-SRCLHWYNLKD 327 (366)
Q Consensus 250 ~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~-~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t 327 (366)
+..+++|++... . =.|++++.. +=..+.+|....-.... ...-+-.. +|. |+.... ...+.+.|++|
T Consensus 142 t~Dg~~L~vSdG--s---~~l~~iDp~----T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 142 CYWNGKLVRSDG--G---TMLTFHEPD----GFALVGAVQVKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp EEETTEEEEECS--S---SEEEEECTT----TCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTT
T ss_pred ecCCCEEEEECC--C---CEEEEEcCC----CCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeCCC
Confidence 555778888753 2 267777742 12234444432211000 12223322 665 887764 44699999999
Q ss_pred CcE-EEEEEe
Q 017755 328 HKQ-DVIEIR 336 (366)
Q Consensus 328 ~~~-~~v~~~ 336 (366)
+++ +.+.+.
T Consensus 211 G~V~~~Idl~ 220 (268)
T 3nok_A 211 GTVVGVIDAS 220 (268)
T ss_dssp CBEEEEEECH
T ss_pred CcEEEEEECC
Confidence 996 455553
No 124
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=80.52 E-value=29 Score=30.30 Aligned_cols=182 Identities=11% Similarity=0.090 Sum_probs=90.3
Q ss_pred eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcE
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTW 182 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W 182 (366)
.++....++.+.+||..+++....-... ......+.+.|..+.-.++... ..-.+.+|+.+++..
T Consensus 168 ~l~t~s~D~~v~lwd~~~~~~~~~~~~h----------~~~v~~~~~~~~~~g~~l~sgs-----~Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 168 QILTASGDGTCALWDVESGQLLQSFHGH----------GADVLCLDLAPSETGNTFVSGG-----CDKKAMVWDMRSGQC 232 (354)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECC----------SSCEEEEEECCCSSCCEEEEEE-----TTSCEEEEETTTCCE
T ss_pred EEEEEeCCCcEEEEeCCCCeEEEEEcCC----------CCCeEEEEEEeCCCCCEEEEEe-----CCCeEEEEECCCCcE
Confidence 3444445778999999888764321111 1112234455543322333221 233577788877643
Q ss_pred Eec-CCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEE-ECCEEE
Q 017755 183 RRT-REFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGV-LRGCLW 257 (366)
Q Consensus 183 ~~~-~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~-~~G~L~ 257 (366)
... ..-.... .++.+ +|.....+..+ ..|-.+|+.+.+-.. +....... . ...+.- -+|++.
T Consensus 233 ~~~~~~h~~~v-----~~v~~~p~~~~l~s~s~D------~~v~lwd~~~~~~~~~~~~~~~~~-~-~~~~~~s~~g~~l 299 (354)
T 2pbi_B 233 VQAFETHESDV-----NSVRYYPSGDAFASGSDD------ATCRLYDLRADREVAIYSKESIIF-G-ASSVDFSLSGRLL 299 (354)
T ss_dssp EEEECCCSSCE-----EEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCTTCCS-C-EEEEEECTTSSEE
T ss_pred EEEecCCCCCe-----EEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEcCCCccc-c-eeEEEEeCCCCEE
Confidence 221 1100000 12222 45554444444 378889998765432 33222111 1 112222 246666
Q ss_pred EEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEE
Q 017755 258 INSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYN 324 (366)
Q Consensus 258 ~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 324 (366)
+...... .+.||-+... ..+..+.... . ...-+++.++|..++-...++.+.+||
T Consensus 300 ~~g~~d~--~i~vwd~~~~------~~~~~l~~h~--~--~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 300 FAGYNDY--TINVWDVLKG------SRVSILFGHE--N--RVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEETTS--CEEEEETTTC------SEEEEECCCS--S--CEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCC--cEEEEECCCC------ceEEEEECCC--C--cEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 6655444 7999987531 1233322111 1 356678889998666666677677764
No 125
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=80.35 E-value=44 Score=32.38 Aligned_cols=193 Identities=12% Similarity=0.011 Sum_probs=99.0
Q ss_pred eEEEEcCCCcce--EecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCC
Q 017755 112 GMSVFNPTTKKF--KLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFP 189 (366)
Q Consensus 112 ~~~V~NP~t~~~--~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p 189 (366)
.+++++.-|++. ..+-..+.. ........+.|.. +|-++.... . .....+.+++..++.|+.+..-.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~--------~~~~~~~~~SpDG-~~l~~~~~~-~-~~~~~l~~~~~~~~~~~~l~~~~ 271 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGD--------PTTFLQSDLSRDG-KYLFVYILR-G-WSENDVYWKRPGEKDFRLLVKGV 271 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCC--------TTCEEEEEECTTS-CCEEEEEEE-T-TTEEEEEEECTTCSSCEEEEECS
T ss_pred EEEEEECCCCchhceEEEecCCC--------CEEEEEEEECCCC-CEEEEEEeC-C-CCceEEEEEcCCCCceEEeecCC
Confidence 488888887762 222222111 0112244555543 443333222 1 13445555555566777765311
Q ss_pred ceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCce---eEEECCCCCCCCCeeeEEEEECCEEEEEEecCCCC
Q 017755 190 YYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEK---FYEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEP 266 (366)
Q Consensus 190 ~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~---~~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~ 266 (366)
... ..++.-+|.+|.....+. ....|..+|+.+.+ |+.+-.+... . .-..+...+|+|.+......
T Consensus 272 ~~~----~~~~~~~g~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~-~-~l~~~~~~~~~lv~~~~~dg-- 340 (695)
T 2bkl_A 272 GAK----YEVHAWKDRFYVLTDEGA---PRQRVFEVDPAKPARASWKEIVPEDSS-A-SLLSVSIVGGHLSLEYLKDA-- 340 (695)
T ss_dssp SCC----EEEEEETTEEEEEECTTC---TTCEEEEEBTTBCSGGGCEEEECCCSS-C-EEEEEEEETTEEEEEEEETT--
T ss_pred Cce----EEEEecCCcEEEEECCCC---CCCEEEEEeCCCCCccCCeEEecCCCC-C-eEEEEEEECCEEEEEEEECC--
Confidence 111 123445777655544221 12589999997644 6665333211 1 12233444888877766555
Q ss_pred eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC----CeEEEEECCCCcEEEEE
Q 017755 267 RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS----RCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 267 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~----~~l~~ydl~t~~~~~v~ 334 (366)
...||+++-.+ + ....+..... .....+.+.++|+.+++.... ..++.||+++++.+.+.
T Consensus 341 ~~~l~~~~~~g--~---~~~~l~~~~~---~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 341 TSEVRVATLKG--K---PVRTVQLPGV---GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEEEEEETTC--C---EEEECCCSSS---SEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EEEEEEEeCCC--C---eeEEecCCCC---eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 68899887422 1 2344433211 022234445677767665432 35999999999876663
No 126
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=79.86 E-value=25 Score=29.30 Aligned_cols=145 Identities=12% Similarity=0.046 Sum_probs=83.4
Q ss_pred ceeEEEEEEcCCCcEEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCee
Q 017755 168 DYLEVIIYSLKADTWRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFC 246 (366)
Q Consensus 168 ~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~ 246 (366)
....+.+++..+++=.....++...+.. .-...++.+|-+.... ..+.+||..+.+- ..++.|.. -
T Consensus 41 g~S~v~~vD~~tgkv~~~~~l~~~~fge--Gi~~~~~~ly~ltw~~------~~v~v~D~~tl~~~~ti~~~~~-----G 107 (243)
T 3mbr_X 41 GRSSVRKVDLETGRILQRAEVPPPYFGA--GIVAWRDRLIQLTWRN------HEGFVYDLATLTPRARFRYPGE-----G 107 (243)
T ss_dssp TSCEEEEEETTTCCEEEEEECCTTCCEE--EEEEETTEEEEEESSS------SEEEEEETTTTEEEEEEECSSC-----C
T ss_pred CCceEEEEECCCCCEEEEEeCCCCccee--EEEEeCCEEEEEEeeC------CEEEEEECCcCcEEEEEeCCCC-----c
Confidence 4568889999987544333333322211 1235678999988766 4899999988654 55666542 2
Q ss_pred eEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCc-ceeEEEEEEeCCCeEEEEEc-CCeEEEEE
Q 017755 247 SQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETC-YYTEAFAFSKDGDKALIYQH-SRCLHWYN 324 (366)
Q Consensus 247 ~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~-~~~~~~~~~~~g~~i~l~~~-~~~l~~yd 324 (366)
..|+..+++|++... .. .|++++.. +=..+.+|....-... ....-+-. .+|. ||.... ...+.+.|
T Consensus 108 wglt~dg~~L~vSdg--s~---~l~~iDp~----t~~~~~~I~V~~~g~~~~~lNeLe~-~~G~-lyanvw~s~~I~vID 176 (243)
T 3mbr_X 108 WALTSDDSHLYMSDG--TA---VIRKLDPD----TLQQVGSIKVTAGGRPLDNLNELEW-VNGE-LLANVWLTSRIARID 176 (243)
T ss_dssp CEEEECSSCEEEECS--SS---EEEEECTT----TCCEEEEEECEETTEECCCEEEEEE-ETTE-EEEEETTTTEEEEEC
T ss_pred eEEeeCCCEEEEECC--CC---eEEEEeCC----CCeEEEEEEEccCCcccccceeeEE-eCCE-EEEEECCCCeEEEEE
Confidence 345555678888754 21 47777742 1223444443211000 01112222 2565 887763 44699999
Q ss_pred CCCCcE-EEEEEe
Q 017755 325 LKDHKQ-DVIEIR 336 (366)
Q Consensus 325 l~t~~~-~~v~~~ 336 (366)
++|+++ ..+.+.
T Consensus 177 p~tG~V~~~idl~ 189 (243)
T 3mbr_X 177 PASGKVVAWIDLQ 189 (243)
T ss_dssp TTTCBEEEEEECG
T ss_pred CCCCCEEEEEECC
Confidence 999997 444544
No 127
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=79.85 E-value=25 Score=29.16 Aligned_cols=193 Identities=8% Similarity=-0.007 Sum_probs=98.6
Q ss_pred EEecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEE
Q 017755 96 VIGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVII 174 (366)
Q Consensus 96 ~~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~v 174 (366)
.++..+|.|...+ ....+.++++.++....+-... .....++.+|+..+...+.- .....+.+
T Consensus 42 ~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~----------~~~p~~ia~d~~~~~lyv~d------~~~~~I~~ 105 (267)
T 1npe_A 42 AFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD----------LGSPEGIALDHLGRTIFWTD------SQLDRIEV 105 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT----------CCCEEEEEEETTTTEEEEEE------TTTTEEEE
T ss_pred EEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC----------CCCccEEEEEecCCeEEEEE------CCCCEEEE
Confidence 3444567766655 3567888888776543332111 11244677787544322221 12345677
Q ss_pred EEcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEE
Q 017755 175 YSLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVG 250 (366)
Q Consensus 175 yss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~ 250 (366)
++..+..-+.+.... . ....++.+ +|.+||...... ...|..+++.....+.+ ..+ .. .-..++
T Consensus 106 ~~~~g~~~~~~~~~~--~--~~P~~i~vd~~~g~lyv~~~~~~----~~~I~~~~~dg~~~~~~~~~~--~~--~P~gia 173 (267)
T 1npe_A 106 AKMDGTQRRVLFDTG--L--VNPRGIVTDPVRGNLYWTDWNRD----NPKIETSHMDGTNRRILAQDN--LG--LPNGLT 173 (267)
T ss_dssp EETTSCSCEEEECSS--C--SSEEEEEEETTTTEEEEEECCSS----SCEEEEEETTSCCCEEEECTT--CS--CEEEEE
T ss_pred EEcCCCCEEEEEECC--C--CCccEEEEeeCCCEEEEEECCCC----CcEEEEEecCCCCcEEEEECC--CC--CCcEEE
Confidence 777543322221110 0 11123444 689999875421 13788888876554443 221 11 122344
Q ss_pred EE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCC
Q 017755 251 VL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKD 327 (366)
Q Consensus 251 ~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t 327 (366)
.. ++.|++...... .|++++..+ . .....+. . ...|.++..+++.+++.... ..+..+|+++
T Consensus 174 ~d~~~~~lyv~d~~~~----~I~~~~~~g--~--~~~~~~~--~-----~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 174 FDAFSSQLCWVDAGTH----RAECLNPAQ--P--GRRKVLE--G-----LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp EETTTTEEEEEETTTT----EEEEEETTE--E--EEEEEEE--C-----CCSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred EcCCCCEEEEEECCCC----EEEEEecCC--C--ceEEEec--C-----CCCceEEEEeCCEEEEEECCCCeEEEEeCCC
Confidence 33 468888876543 445554321 1 1111121 1 12344555556668887644 4699999998
Q ss_pred CcEE
Q 017755 328 HKQD 331 (366)
Q Consensus 328 ~~~~ 331 (366)
++..
T Consensus 239 g~~~ 242 (267)
T 1npe_A 239 SKEM 242 (267)
T ss_dssp TEEE
T ss_pred CCce
Confidence 8753
No 128
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=79.81 E-value=29 Score=29.90 Aligned_cols=163 Identities=9% Similarity=0.028 Sum_probs=81.9
Q ss_pred ecccceEEeee--cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEE
Q 017755 98 GCCHGLLAMFN--RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIY 175 (366)
Q Consensus 98 ~s~nGLl~~~~--~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vy 175 (366)
++.+|.+.+++ ....+.++|+..+....+....... ...........++.+||..+...|.- .....+.+|
T Consensus 151 ~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~-~~~~~~~~~p~gia~d~~~g~l~v~d------~~~~~I~~~ 223 (329)
T 3fvz_A 151 EPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGS-SPRPGQFSVPHSLALVPHLDQLCVAD------RENGRIQCF 223 (329)
T ss_dssp CTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSS-SCCTTEESCEEEEEEETTTTEEEEEE------TTTTEEEEE
T ss_pred eCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCC-CCCCcccCCCcEEEEECCCCEEEEEE------CCCCEEEEE
Confidence 33378777766 3678889996554444443221110 00000012356788887644433322 244578889
Q ss_pred EcCCCcEEec-CCC-----CceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEE
Q 017755 176 SLKADTWRRT-REF-----PYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQV 249 (366)
Q Consensus 176 ss~~~~W~~~-~~~-----p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l 249 (366)
+..+++.... ... +..........+..+|.+|...... ..|..+|+.+.+....-.+.......-..+
T Consensus 224 ~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~------~~v~~~~~~~g~~~~~~~~~~~~~~~p~~i 297 (329)
T 3fvz_A 224 KTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEP------VQGFVMNFSSGEIIDVFKPVRKHFDMPHDI 297 (329)
T ss_dssp ETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCC------CCEEEEETTTCCEEEEECCSSSCCSSEEEE
T ss_pred ECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCC------cEEEEEEcCCCeEEEEEcCCCCccCCeeEE
Confidence 9886655332 111 1111111111233355544332222 479999988877654422211111112344
Q ss_pred EEE-CCEEEEEEecCCCCeEEEEEEee
Q 017755 250 GVL-RGCLWINSYYHDEPRCDIWVMKE 275 (366)
Q Consensus 250 ~~~-~G~L~~v~~~~~~~~l~iW~l~~ 275 (366)
+.. +|.|++...... .+.+|.++.
T Consensus 298 a~~~dG~lyvad~~~~--~I~~~~~~~ 322 (329)
T 3fvz_A 298 VASEDGTVYIGDAHTN--TVWKFTLTE 322 (329)
T ss_dssp EECTTSEEEEEESSSC--CEEEEEEEE
T ss_pred EECCCCCEEEEECCCC--EEEEEeCCc
Confidence 444 578888776544 688888875
No 129
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=79.75 E-value=24 Score=28.96 Aligned_cols=188 Identities=10% Similarity=0.030 Sum_probs=96.6
Q ss_pred cccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 99 CCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 99 s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
..+|-+.+.+....++++||.++....++..... ...++.+|+.. . +.. .. .....+.+|+.+
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~----------~p~~i~~~~~g-~--l~v-~~---~~~~~i~~~~~~ 137 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLN----------YPEGLAVDTQG-A--VYV-AD---RGNNRVVKLAAG 137 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCCEECCCCSCS----------SEEEEEECTTC-C--EEE-EE---GGGTEEEEECTT
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcC----------CCcceEECCCC-C--EEE-EE---CCCCEEEEEECC
Confidence 3456555554466899999988876665433211 23467777743 2 222 11 123345666555
Q ss_pred CCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCE
Q 017755 179 ADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGC 255 (366)
Q Consensus 179 ~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~ 255 (366)
+......... .. ....++.+ +|.+|+..... ..|..||..+.......... . . .-..++.. +|.
T Consensus 138 ~~~~~~~~~~--~~--~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~-~-~-~p~~i~~d~~g~ 204 (270)
T 1rwi_B 138 SKTQTVLPFT--GL--NDPDGVAVDNSGNVYVTDTDN------NRVVKLEAESNNQVVLPFTD-I-T-APWGIAVDEAGT 204 (270)
T ss_dssp CCSCEECCCC--SC--CSCCCEEECTTCCEEEEEGGG------TEEEEECTTTCCEEECCCSS-C-C-SEEEEEECTTCC
T ss_pred CceeEeeccc--cC--CCceeEEEeCCCCEEEEECCC------CEEEEEecCCCceEeecccC-C-C-CceEEEECCCCC
Confidence 5443322110 00 01123444 57877665443 37999999877654432211 1 1 12344444 478
Q ss_pred EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEECCCCc
Q 017755 256 LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNLKDHK 329 (366)
Q Consensus 256 L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t~~ 329 (366)
|++...... .+.+|..+. ..... +....+ ....-+++.++|. +++... +..+..|++..++
T Consensus 205 l~v~~~~~~--~v~~~~~~~---~~~~~----~~~~~~---~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 205 VYVTEHNTN--QVVKLLAGS---TTSTV----LPFTGL---NTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEETTTS--CEEEECTTC---SCCEE----CCCCSC---SCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGG
T ss_pred EEEEECCCC--cEEEEcCCC---Cccee----eccCCC---CCceeEEECCCCC-EEEEECCCCEEEEEcCCCcc
Confidence 887766433 455554332 11111 111111 1244566777887 776653 4568888886654
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=79.69 E-value=34 Score=30.70 Aligned_cols=183 Identities=8% Similarity=0.058 Sum_probs=97.0
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCCc
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFPY 190 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~ 190 (366)
..+++||..+++...+..... ....+.+.|.. ++ ++.... .+....+.+++..++..+.+..-+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~-----------~~~~~~~spdg-~~-la~~~~--~~g~~~i~~~d~~~~~~~~l~~~~~ 267 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR-----------HNGAPAFSPDG-SK-LAFALS--KTGSLNLYVMDLASGQIRQVTDGRS 267 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS-----------CEEEEEECTTS-SE-EEEEEC--TTSSCEEEEEETTTCCEEECCCCSS
T ss_pred cEEEEEECCCCcEEEeecCCC-----------cccCEEEcCCC-CE-EEEEEe--cCCCceEEEEECCCCCEEeCcCCCC
Confidence 489999999998876643321 12245566542 22 222211 1234568888998887766653221
Q ss_pred eeecCCCCceE--ECCe-EEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCE-EEEEEecCCC
Q 017755 191 YILDDRCNGVF--IAGA-LHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGC-LWINSYYHDE 265 (366)
Q Consensus 191 ~~~~~~~~~v~--~~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~-L~~v~~~~~~ 265 (366)
.. ..+. -+|. +++....+. ...|..+|+.+.+...+..... ....+.-. +|+ |++.......
T Consensus 268 ~~-----~~~~~spdg~~l~~~s~~~g----~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdG~~l~~~~~~~g~ 334 (415)
T 2hqs_A 268 NN-----TEPTWFPDSQNLAFTSDQAG----RPQVYKVNINGGAPQRITWEGS----QNQDADVSSDGKFMVMVSSNGGQ 334 (415)
T ss_dssp CE-----EEEEECTTSSEEEEEECTTS----SCEEEEEETTSSCCEECCCSSS----EEEEEEECTTSSEEEEEEECSSC
T ss_pred cc-----cceEECCCCCEEEEEECCCC----CcEEEEEECCCCCEEEEecCCC----cccCeEECCCCCEEEEEECcCCc
Confidence 11 0121 2565 444332221 1378889998877554432211 12223222 455 4444443232
Q ss_pred CeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCC---eEEEEECCCCcEEEE
Q 017755 266 PRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSR---CLHWYNLKDHKQDVI 333 (366)
Q Consensus 266 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~---~l~~ydl~t~~~~~v 333 (366)
..+.+|-++. ... ..+.... ....+.+.++|+.|++...+. .++.+|++++..+.+
T Consensus 335 ~~i~~~d~~~----~~~---~~l~~~~-----~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 335 QHIAKQDLAT----GGV---QVLSSTF-----LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp EEEEEEETTT----CCE---EECCCSS-----SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred eEEEEEECCC----CCE---EEecCCC-----CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 2444444432 222 2222211 244567889999777766544 599999998887776
No 131
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=79.43 E-value=29 Score=29.65 Aligned_cols=62 Identities=13% Similarity=0.120 Sum_probs=38.3
Q ss_pred eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECC-CCcEEEEE
Q 017755 267 RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLK-DHKQDVIE 334 (366)
Q Consensus 267 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~-t~~~~~v~ 334 (366)
.+.||.++... ...|.....-.... ...-+++.++|..+.....++.+.+|+.. .+.|+.+.
T Consensus 239 ~v~iw~~~~~~-~~~~~~~~~~~~~~-----~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~ 301 (316)
T 3bg1_A 239 RVFIWTCDDAS-SNTWSPKLLHKFND-----VVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCIS 301 (316)
T ss_dssp EEEEEECSSTT-CCCCBCCEEEECSS-----CEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEE
T ss_pred eEEEEEccCcc-ccchhhhhhhcCCC-----cEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEee
Confidence 79999987532 13343211101111 34557888999866666677779999976 55677774
No 132
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=79.41 E-value=48 Score=32.21 Aligned_cols=116 Identities=10% Similarity=0.035 Sum_probs=66.7
Q ss_pred ECCeEEEEEeeCCCCCCcceEEEEECCCc---eeEEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCC
Q 017755 202 IAGALHWLAARGSVRTGQNMILAFDLKSE---KFYEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGS 278 (366)
Q Consensus 202 ~~G~lyw~~~~~~~~~~~~~i~~fD~~~e---~~~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~ 278 (366)
-++.+|+++..+. ....|+..|+.+. .|+.+. |... . .. .+...++.|.+...... .-.|++++-.
T Consensus 290 ~g~~l~~~t~~~~---~~~~l~~~d~~~~~~~~~~~l~-~~~~-~-~~-~~s~~g~~lv~~~~~~g--~~~l~~~d~~-- 358 (693)
T 3iuj_A 290 KGSTLYLLTNRDA---PNRRLVTVDAANPGPAHWRDLI-PERQ-Q-VL-TVHSGSGYLFAEYMVDA--TARVEQFDYE-- 358 (693)
T ss_dssp ETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEE-CCCS-S-CE-EEEEETTEEEEEEEETT--EEEEEEECTT--
T ss_pred cCCEEEEEECCCC---CCCEEEEEeCCCCCccccEEEe-cCCC-C-EE-EEEEECCEEEEEEEECC--eeEEEEEECC--
Confidence 3678888776532 1258999999863 466542 2222 1 12 55556777877666554 3455555532
Q ss_pred CCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC----CeEEEEECCCCcEEEEE
Q 017755 279 QQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS----RCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 279 ~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~----~~l~~ydl~t~~~~~v~ 334 (366)
..+. ..+..+.. .....+...++++.+++...+ ..++.||+++++.+.+.
T Consensus 359 -g~~~--~~l~~p~~---~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 359 -GKRV--REVALPGL---GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp -SCEE--EEECCSSS---SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred -CCee--EEeecCCC---ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 2233 33443221 123333444577767776544 46999999999877664
No 133
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=79.39 E-value=32 Score=30.24 Aligned_cols=194 Identities=12% Similarity=0.127 Sum_probs=94.6
Q ss_pred EEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCC--c
Q 017755 104 LAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKAD--T 181 (366)
Q Consensus 104 l~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~--~ 181 (366)
++....++.+.+||..+++....-...... .+ ......+.+.+..+++-+.+ .....+.+|+.+.. .
T Consensus 173 l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~-~h----~~~v~~~~~~~~~~~~l~sg------s~D~~v~~wd~~~~~~~ 241 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQRISIFGSEFPS-GH----TADVLSLSINSLNANMFISG------SCDTTVRLWDLRITSRA 241 (380)
T ss_dssp EEEECTTSCEEEECTTTCCEEEEECCCSSS-SC----CSCEEEEEECSSSCCEEEEE------ETTSCEEEEETTTTCCC
T ss_pred EEEECCCCcEEEEEcCCCcEEEEeecccCC-CC----ccCeEEEEeecCCCCEEEEE------ECCCeEEEEECCCCCcc
Confidence 444445778999999998876532221111 01 11233444444333322221 12335677777532 1
Q ss_pred EEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCC---CeeeEEEE-ECC
Q 017755 182 WRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKG---GFCSQVGV-LRG 254 (366)
Q Consensus 182 W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~---~~~~~l~~-~~G 254 (366)
-+....-. ..-..+.+ +|.....+..+ ..|-.+|+.+.+- ..+........ .....+.- -+|
T Consensus 242 ~~~~~~h~-----~~v~~v~~~p~~~~l~s~s~D------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 310 (380)
T 3iz6_a 242 VRTYHGHE-----GDINSVKFFPDGQRFGTGSDD------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISG 310 (380)
T ss_dssp CEEECCCS-----SCCCEEEECTTSSEEEEECSS------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSS
T ss_pred eEEECCcC-----CCeEEEEEecCCCeEEEEcCC------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCC
Confidence 11111100 00012222 45544444433 3789999987654 33333222211 01122222 257
Q ss_pred EEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCC--CCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCc
Q 017755 255 CLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKM--LHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 255 ~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~--~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~ 329 (366)
++.+...... .+.+|-+... ..+..+... ...+ ...-+++.++|..++-...++.+.+||+.+++
T Consensus 311 ~~l~~g~~dg--~i~vwd~~~~------~~~~~~~~~~~~h~~--~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 311 RLLFAGYSNG--DCYVWDTLLA------EMVLNLGTLQNSHEG--RISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SEEEEECTTS--CEEEEETTTC------CEEEEECCSCSSCCC--CCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred CEEEEEECCC--CEEEEECCCC------ceEEEEecccCCCCC--ceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 7666655444 7999976531 122333211 1111 34557888999865555567779999998753
No 134
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=79.09 E-value=4 Score=29.65 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=30.3
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEE
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRII 162 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 162 (366)
-++++++|.+++|... .... ......+..|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~--~~~~--------g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPA--GGST--------GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEG--GGCC--------SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceEEC--CCCC--------CceEEEEEEECCCCEEEEEEEE
Confidence 4688999999977554 3211 3345678889888889999875
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=79.04 E-value=29 Score=29.46 Aligned_cols=106 Identities=11% Similarity=0.125 Sum_probs=60.0
Q ss_pred ceEEEEECC--CceeE---EE-CCCCCCCCC-eeeEEEEE-CCE-EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecC
Q 017755 220 NMILAFDLK--SEKFY---EV-QQPHGMKGG-FCSQVGVL-RGC-LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSK 290 (366)
Q Consensus 220 ~~i~~fD~~--~e~~~---~i-~~P~~~~~~-~~~~l~~~-~G~-L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~ 290 (366)
..|..+|+. +.++. .+ .+|...... ....+... +|+ |++..... +.+.+|.++.. ...+..+..+..
T Consensus 200 ~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~--~~i~v~d~~~~--~~~~~~~~~~~~ 275 (343)
T 1ri6_A 200 SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA--SLITVFSVSED--GSVLSKEGFQPT 275 (343)
T ss_dssp TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT--TEEEEEEECTT--SCCEEEEEEEEC
T ss_pred CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC--CEEEEEEEcCC--CCceEEeeeecC
Confidence 378888884 34432 23 344432111 11223333 354 54443222 37999999852 245666666654
Q ss_pred CCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEE--ECCCCcEEEEE
Q 017755 291 MLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWY--NLKDHKQDVIE 334 (366)
Q Consensus 291 ~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~y--dl~t~~~~~v~ 334 (366)
... ..-+++.++|+.+++... +..+.+| |.++++++.+.
T Consensus 276 ~~~-----~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 276 ETQ-----PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp SSS-----CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred CCc-----cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 332 233778889997777763 4556666 88899888874
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=79.04 E-value=30 Score=29.61 Aligned_cols=189 Identities=10% Similarity=-0.021 Sum_probs=90.9
Q ss_pred CceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCC
Q 017755 110 RLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREF 188 (366)
Q Consensus 110 ~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~ 188 (366)
...+.++|+.+++... ++.... ..++.++|..+ +-++. . .....+.+++..+++-...-..
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~------------~~~~~~s~dg~-~l~v~--~---~~~~~v~~~d~~~~~~~~~~~~ 129 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK------------PFGATINNTTQ-TLWFG--N---TVNSAVTAIDAKTGEVKGRLVL 129 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC------------CCSEEEETTTT-EEEEE--E---TTTTEEEEEETTTCCEEEEEES
T ss_pred CccEEEEcCCCCeEEEEEecCCC------------cceEEECCCCC-EEEEE--e---cCCCEEEEEeCCCCeeEEEEec
Confidence 4579999999987643 332211 11345555433 22221 1 1234678888877643211111
Q ss_pred Cceee-----cCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEECC-EEEEE
Q 017755 189 PYYIL-----DDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVLRG-CLWIN 259 (366)
Q Consensus 189 p~~~~-----~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~~G-~L~~v 259 (366)
+.... .....++.+ +|...++..... ...|..+|+.+.+... ++.+...- ....+. -+| .|++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~s-~dg~~l~~~ 202 (353)
T 3vgz_A 130 DDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNTGKMS--TGLALD-SEGKRLYTT 202 (353)
T ss_dssp CCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCCCTTC--CCCEEE-TTTTEEEEE
T ss_pred CCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCCCCcc--ceEEEC-CCCCEEEEE
Confidence 10000 000012333 565444443221 1379999998876543 34222110 111222 234 44444
Q ss_pred EecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcEEE
Q 017755 260 SYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQDV 332 (366)
Q Consensus 260 ~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~~~ 332 (366)
.. . +.+.+|-++. ......+....-.......-+++.++|+.+++.... ..+..||+++++...
T Consensus 203 ~~-~--~~i~~~d~~~------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 203 NA-D--GELITIDTAD------NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp CT-T--SEEEEEETTT------TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cC-C--CeEEEEECCC------CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 32 2 2566655442 223333333111001124447888899977777654 569999999988643
No 137
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=78.83 E-value=19 Score=30.76 Aligned_cols=111 Identities=12% Similarity=0.033 Sum_probs=59.3
Q ss_pred ECCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCE-EEEEEecCCCCeEEEEEEeecCC
Q 017755 202 IAGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGC-LWINSYYHDEPRCDIWVMKEYGS 278 (366)
Q Consensus 202 ~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~-L~~v~~~~~~~~l~iW~l~~~~~ 278 (366)
.++.+|.....+ ..|..+|+.+.+.. .+..+.... ...+... +|+ +++... .. ..+.+|-++.
T Consensus 9 ~~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~~~v~~~-~~-~~i~~~d~~t--- 74 (349)
T 1jmx_B 9 AGHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPDKFG---PGTAMMAPDNRTAYVLNN-HY-GDIYGIDLDT--- 74 (349)
T ss_dssp TTCEEEEEEETT------TEEEEEETTTTEEEEEEECSSCCS---SCEEEECTTSSEEEEEET-TT-TEEEEEETTT---
T ss_pred CCCEEEEEeCCC------CeEEEEECCCCcEEEEEecCCCCC---CceeEECCCCCEEEEEeC-CC-CcEEEEeCCC---
Confidence 345555555443 48999999987764 456654111 1122223 455 444443 22 2666665542
Q ss_pred CCCeeEEEEecCCCCCCc--ceeEEEEEEeCCCeEEEEEcC------------CeEEEEECCCCc
Q 017755 279 QQSWSKLCSFSKMLHETC--YYTEAFAFSKDGDKALIYQHS------------RCLHWYNLKDHK 329 (366)
Q Consensus 279 ~~~W~~~~~i~~~~~~~~--~~~~~~~~~~~g~~i~l~~~~------------~~l~~ydl~t~~ 329 (366)
.+ .+..+.....+.. ....-+.+.++|+.+++...+ ..+..||+++++
T Consensus 75 -~~--~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 75 -CK--NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp -TE--EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred -Cc--EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 21 2333332221000 012336788899877777643 569999998854
No 138
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=78.73 E-value=34 Score=30.18 Aligned_cols=198 Identities=9% Similarity=-0.027 Sum_probs=98.7
Q ss_pred eEEeeecCceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCc
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADT 181 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~ 181 (366)
+++....++.+.|||..+++... +..... ......+.+.|.. ++ ++.. . ..-.+.+|+.+++.
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~-~~-l~~~-~----~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVH---------PDTIYSVDWSRDG-AL-ICTS-C----RDKRVRVIEPRKGT 209 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTTC---------CSCEEEEEECTTS-SC-EEEE-E----TTSEEEEEETTTTE
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCCC---------CCceEEEEECCCC-CE-EEEE-e----cCCcEEEEeCCCCc
Confidence 44444567789999999887653 321111 1123356666632 22 2222 1 33468888887764
Q ss_pred EEecC-CCCceeecCCCCce--EECCeEEEEEeeCCCCCCcceEEEEECCCce--eEEECCCCCCCCCeeeEEEEE-CCE
Q 017755 182 WRRTR-EFPYYILDDRCNGV--FIAGALHWLAARGSVRTGQNMILAFDLKSEK--FYEVQQPHGMKGGFCSQVGVL-RGC 255 (366)
Q Consensus 182 W~~~~-~~p~~~~~~~~~~v--~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~--~~~i~~P~~~~~~~~~~l~~~-~G~ 255 (366)
-...- ...... ....+ .-+|.+...+.... ....|..+|+.+.+ ......+... ....+.-. +|+
T Consensus 210 ~~~~~~~~~~~~---~~~~~~~~~~~~~l~~g~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~ 280 (402)
T 2aq5_A 210 VVAEKDRPHEGT---RPVHAVFVSEGKILTTGFSRM---SERQVALWDTKHLEEPLSLQELDTSS---GVLLPFFDPDTN 280 (402)
T ss_dssp EEEEEECSSCSS---SCCEEEECSTTEEEEEEECTT---CCEEEEEEETTBCSSCSEEEECCCCS---SCEEEEEETTTT
T ss_pred eeeeeccCCCCC---cceEEEEcCCCcEEEEeccCC---CCceEEEEcCccccCCceEEeccCCC---ceeEEEEcCCCC
Confidence 32211 000000 00111 12455544442110 01489999998643 2233332222 12223322 455
Q ss_pred EEEEEecCCCCeEEEEEEeecCCCCCee-EEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEEE
Q 017755 256 LWINSYYHDEPRCDIWVMKEYGSQQSWS-KLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 256 L~~v~~~~~~~~l~iW~l~~~~~~~~W~-~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v~ 334 (366)
..++....+. .+.+|.++.. ..+. .+....... ...-+++.++|. +++ ..+..+.+|++.+++.+.+.
T Consensus 281 ~l~~~g~~dg-~i~i~d~~~~---~~~~~~l~~~~~~~-----~v~~~~~sp~~~-~~~-s~~~~~~~~~l~~~~~~~i~ 349 (402)
T 2aq5_A 281 IVYLCGKGDS-SIRYFEITSE---APFLHYLSMFSSKE-----SQRGMGYMPKRG-LEV-NKCEIARFYKLHERKCEPIA 349 (402)
T ss_dssp EEEEEETTCS-CEEEEEECSS---TTCEEEEEEECCSS-----CCSEEEECCGGG-SCG-GGTEEEEEEEEETTEEEEEE
T ss_pred EEEEEEcCCC-eEEEEEecCC---CcceEeecccccCC-----cccceEEecccc-cce-ecceeEEEEEcCCCcEEEEE
Confidence 5444443222 7999999862 2222 233332111 234467778876 333 34446999999999998886
Q ss_pred Ee
Q 017755 335 IR 336 (366)
Q Consensus 335 ~~ 336 (366)
+.
T Consensus 350 ~~ 351 (402)
T 2aq5_A 350 MT 351 (402)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 139
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=78.68 E-value=29 Score=29.26 Aligned_cols=72 Identities=13% Similarity=0.169 Sum_probs=42.3
Q ss_pred EEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECC-CCcEEEE
Q 017755 255 CLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLK-DHKQDVI 333 (366)
Q Consensus 255 ~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~-t~~~~~v 333 (366)
.+.+...... .+.||.++.. ...|.... +....... ...-+.+.++|..+.....++.+.+|+.. .++|+.+
T Consensus 220 ~~las~s~D~--~v~iWd~~~~--~~~~~~~~-~~~~~~~~--~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~ 292 (297)
T 2pm7_B 220 SYMASVSQDR--TCIIWTQDNE--QGPWKKTL-LKEEKFPD--VLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 292 (297)
T ss_dssp EEEEEEETTS--CEEEEEESST--TSCCEEEE-SSSSCCSS--CEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC
T ss_pred eEEEEEECCC--cEEEEEeCCC--CCccceee-eecccCCC--cEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEec
Confidence 4444433333 7999998752 23465322 21111111 34557788899866666777778899876 4556655
No 140
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=78.57 E-value=29 Score=29.20 Aligned_cols=200 Identities=13% Similarity=0.073 Sum_probs=94.9
Q ss_pred cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEec-CC
Q 017755 109 RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRT-RE 187 (366)
Q Consensus 109 ~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~-~~ 187 (366)
....++++||.+++...+..+.... . .....++.+++..+. +... . ....+.+|+.. +..+.+ ..
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~-~-----~~~~~~i~~~~~~g~--l~v~-~----~~~~l~~~d~~-g~~~~~~~~ 109 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNG-Y-----GGIPAGCQCDRDANQ--LFVA-D----MRLGLLVVQTD-GTFEEIAKK 109 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETT-E-----ECCEEEEEECSSSSE--EEEE-E----TTTEEEEEETT-SCEEECCSB
T ss_pred CCCEEEEEeCCCCcEEEEEecccCC-C-----CCCCceEEEecCCCc--EEEE-E----CCCCEEEEeCC-CCEEEEEec
Confidence 4567999999999887654311000 0 112345666764232 2211 1 11257778887 766655 32
Q ss_pred CCceeecCCCCceEE--CCeEEEEEeeCC---------CCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE----
Q 017755 188 FPYYILDDRCNGVFI--AGALHWLAARGS---------VRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL---- 252 (366)
Q Consensus 188 ~p~~~~~~~~~~v~~--~G~lyw~~~~~~---------~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~---- 252 (366)
............+.+ +|.+|+...... .......|..+|.. .++..+..... ....++..
T Consensus 110 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~----~~~~i~~~~~~d 184 (314)
T 1pjx_A 110 DSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ----FPNGIAVRHMND 184 (314)
T ss_dssp CTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES----SEEEEEEEECTT
T ss_pred cCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC----CcceEEEecccC
Confidence 211111111123444 577766553320 00011378899987 55544311100 01123333
Q ss_pred -CC-EEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEec-CCCCCCcceeEEEEEEeCCCeEEEEE-cCCeEEEEECCCC
Q 017755 253 -RG-CLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFS-KMLHETCYYTEAFAFSKDGDKALIYQ-HSRCLHWYNLKDH 328 (366)
Q Consensus 253 -~G-~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~-~~~~~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~ydl~t~ 328 (366)
+| .|++...... .+.+|.++.. ........+. ..... .....-+++.++|. +++.. ....+..||++++
T Consensus 185 ~dg~~l~v~~~~~~--~i~~~~~~~~---g~~~~~~~~~~~~~~~-~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 185 GRPYQLIVAETPTK--KLWSYDIKGP---AKIENKKVWGHIPGTH-EGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp SCEEEEEEEETTTT--EEEEEEEEET---TEEEEEEEEEECCCCS-SCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCB
T ss_pred CCCCEEEEEECCCC--eEEEEECCCC---CccccceEEEECCCCC-CCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCC
Confidence 35 4555544333 6777766531 2233222111 11100 01233466677887 77765 4456999999966
Q ss_pred cE-EEEE
Q 017755 329 KQ-DVIE 334 (366)
Q Consensus 329 ~~-~~v~ 334 (366)
+. +.+.
T Consensus 258 ~~~~~~~ 264 (314)
T 1pjx_A 258 QPKMRIR 264 (314)
T ss_dssp SCSEEEE
T ss_pred cEeEEEe
Confidence 53 4443
No 141
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=78.52 E-value=15 Score=36.06 Aligned_cols=114 Identities=12% Similarity=0.140 Sum_probs=57.0
Q ss_pred ceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEE--ECCEEEEEEecCCCCeEEEEEE
Q 017755 199 GVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGV--LRGCLWINSYYHDEPRCDIWVM 273 (366)
Q Consensus 199 ~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~--~~G~L~~v~~~~~~~~l~iW~l 273 (366)
++.+ +|.|||...... ..|..+|+....-..+... ... .-..|+. .+|+||++..... .|+++
T Consensus 500 giavDp~~g~ly~td~~~~-----~~I~~~~~dG~~~~~l~~~-~l~--~PnGlavd~~~~~LY~aD~~~~----~I~~~ 567 (699)
T 1n7d_A 500 AIVVDPVHGFMYWTDWGTP-----AKIKKGGLNGVDIYSLVTE-NIQ--WPNGITLDLLSGRLYWVDSKLH----SISSI 567 (699)
T ss_dssp CEECCSSSSCCEECCCSSS-----CCEEBCCSSSCCCCEESCS-SCS--SCCCEEECTTTCCEEEEETTTT----EEEEE
T ss_pred eEEEccCCCcEEEcccCCC-----CeEEEEeCCCCCeeEEEeC-CCC--CccEEEEeccCCEEEEEecCCC----eEEEE
Confidence 4544 689999764321 3688888765433333110 110 0112333 3578888875432 45555
Q ss_pred eecCCCCCeeEEEEe-cCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcEEEE
Q 017755 274 KEYGSQQSWSKLCSF-SKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 274 ~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~~~v 333 (366)
+..+. . +..+ ..... ...|.++.-+++.+|+.... ..|..+|..+++...+
T Consensus 568 d~dG~-~----~~~~~~~~~~----~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 568 DVNGG-N----RKTILEDEKR----LAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNL 620 (699)
T ss_dssp CSSSS-C----CEEECCCSSS----CSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEEC
T ss_pred ccCCC-c----eEEEEecCCc----CCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEE
Confidence 53221 1 1111 11111 12333443345557777643 3599999988775443
No 142
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=78.33 E-value=55 Score=32.26 Aligned_cols=208 Identities=10% Similarity=0.008 Sum_probs=102.8
Q ss_pred EecccceEEeeecCceEEEEcCCCcceEecCCCCCC--CccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEE
Q 017755 97 IGCCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSD--CYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVII 174 (366)
Q Consensus 97 ~~s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~--~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~v 174 (366)
....+|-|-+......+..++|.++.+..+...+.. . .... ......+..|+... +.+.. ..-.+..
T Consensus 319 ~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~-~~l~--~~~v~~i~~d~~g~----lWigt----~~~Gl~~ 387 (781)
T 3v9f_A 319 FQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNE-SSLS--NKVVSSVCDDGQGK----LWIGT----DGGGINV 387 (781)
T ss_dssp EECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCS-SCCS--SSCEEEEEECTTSC----EEEEE----BSSCEEE
T ss_pred EEeCCCCEEEEecCCeEEEeCCCCCcceeeccCcccccc-CCCC--CcceEEEEEcCCCC----EEEEe----CCCcEEE
Confidence 333455554443456788889988887766432110 0 0000 11223444454211 22222 1223556
Q ss_pred EEcCCCcEEecCCCCceeecCCCCceEEC-CeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-
Q 017755 175 YSLKADTWRRTREFPYYILDDRCNGVFIA-GALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL- 252 (366)
Q Consensus 175 yss~~~~W~~~~~~p~~~~~~~~~~v~~~-G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~- 252 (366)
|+..++.++.... +.........+++.+ ..-.|++... ..+..||..+++++.+..+ .........+.+.
T Consensus 388 ~~~~~~~~~~~~~-~~~~~~~~v~~i~~d~~g~lWigt~~------~Gl~~~~~~~~~~~~~~~~-~~~~~~v~~i~~d~ 459 (781)
T 3v9f_A 388 FENGKRVAIYNKE-NRELLSNSVLCSLKDSEGNLWFGTYL------GNISYYNTRLKKFQIIELE-KNELLDVRVFYEDK 459 (781)
T ss_dssp EETTEEEEECC------CCCSBEEEEEECTTSCEEEEETT------EEEEEECSSSCEEEECCST-TTCCCCEEEEEECT
T ss_pred EECCCCeEEEccC-CCCCCCcceEEEEECCCCCEEEEecc------CCEEEEcCCCCcEEEeccC-CCCCCeEEEEEECC
Confidence 6776666654421 111111111133332 2335666543 3799999999999887543 1211123455555
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
+|.|.+.+. . .+ +.++.. ...|..........+.. ....-+...++|. +++.+....++.||+++++++.
T Consensus 460 ~g~lwigt~--~--Gl--~~~~~~--~~~~~~~~~~~~~~~~~-~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~ 529 (781)
T 3v9f_A 460 NKKIWIGTH--A--GV--FVIDLA--SKKVIHHYDTSNSQLLE-NFVRSIAQDSEGR-FWIGTFGGGVGIYTPDMQLVRK 529 (781)
T ss_dssp TSEEEEEET--T--EE--EEEESS--SSSCCEEECTTTSSCSC-SCEEEEEECTTCC-EEEEESSSCEEEECTTCCEEEE
T ss_pred CCCEEEEEC--C--ce--EEEeCC--CCeEEecccCccccccc-ceeEEEEEcCCCC-EEEEEcCCCEEEEeCCCCeEEE
Confidence 588888764 2 33 444431 24565544322111111 1233344555666 8887765569999999998776
Q ss_pred E
Q 017755 333 I 333 (366)
Q Consensus 333 v 333 (366)
.
T Consensus 530 ~ 530 (781)
T 3v9f_A 530 F 530 (781)
T ss_dssp E
T ss_pred c
Confidence 5
No 143
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=78.31 E-value=38 Score=30.42 Aligned_cols=157 Identities=11% Similarity=0.071 Sum_probs=81.5
Q ss_pred EeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcc
Q 017755 144 FDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQN 220 (366)
Q Consensus 144 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~ 220 (366)
..++++|+..+...+.- ...-.++++++.+..-+.+.... .....++.+ +|.|||...... .
T Consensus 161 p~glavD~~~~~lY~~d------~~~~~I~~~~~~g~~~~~l~~~~----~~~P~~iavdp~~g~ly~td~~~~-----~ 225 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTD------SVLGTVSVADTKGVKRKTLFREN----GSKPRAIVVDPVHGFMYWTDWGTP-----A 225 (400)
T ss_dssp EEEEEEETTTTEEEEEE------TTTTEEEEECTTTCSEEEEEECS----SCCEEEEEEETTTTEEEEEECSSS-----C
T ss_pred cccEEEEecCCceEEEE------CCCCeEEEEeCCCCceEEEEeCC----CCCcceEEEecccCeEEEEeCCCC-----C
Confidence 45788887555422221 22345677777665444432100 000123444 689999875432 3
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEEEEE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcce
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYY 298 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 298 (366)
.|..+|+....-..+-. .... .-..|+.. +|+||++..... .|+..+-.+ ....+. .. .... .
T Consensus 226 ~I~~~~~dG~~~~~~~~-~~l~--~P~glavd~~~~~lY~aD~~~~----~I~~~d~dG-~~~~~~-~~-~~~~-----l 290 (400)
T 3p5b_L 226 KIKKGGLNGVDIYSLVT-ENIQ--WPNGITLDLLSGRLYWVDSKLH----SISSIDVNG-GNRKTI-LE-DEKR-----L 290 (400)
T ss_dssp CEEEEETTSCSCEEEEC-SSCS--CEEEEEEETTTTEEEEEETTTT----EEEEEETTS-CCCEEE-EE-CSST-----T
T ss_pred EEEEEeCCCCccEEEEE-CCCC--ceEEEEEEeCCCEEEEEECCCC----EEEEEeCCC-CccEEE-Ee-CCCC-----C
Confidence 78999987644333311 1111 12234444 689999876432 566666432 222221 11 1111 2
Q ss_pred eEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcE
Q 017755 299 TEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQ 330 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~ 330 (366)
..|.++.-+++.+|+.... ..+..+|..+++.
T Consensus 291 ~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 291 AHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp SSEEEEEEETTEEEEEESSSCSEEEEESSSCCC
T ss_pred CCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCc
Confidence 4455665556668887644 3499999777754
No 144
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=78.30 E-value=44 Score=31.20 Aligned_cols=71 Identities=10% Similarity=0.001 Sum_probs=41.8
Q ss_pred CE-EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeC-CCeEEEEEcCCeEEEEECCCCcEE
Q 017755 254 GC-LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKD-GDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 254 G~-L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~-g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
|. +.+...... .+.+|.++. ...+..+....-. .....-+.+.++ |+.++....++.+.+||+++++..
T Consensus 172 ~~~~l~~~~~d~--~v~vwd~~~------~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 172 RPMRSMTVGDDG--SVVFYQGPP------FKFSASDRTHHKQ-GSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 242 (615)
T ss_dssp SSCEEEEEETTT--EEEEEETTT------BEEEEEECSSSCT-TCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE
T ss_pred CCcEEEEEeCCC--cEEEEeCCC------cceeeeecccCCC-CceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe
Confidence 44 444444333 799997553 3344444321110 002455778888 886666677777999999988754
Q ss_pred EE
Q 017755 332 VI 333 (366)
Q Consensus 332 ~v 333 (366)
..
T Consensus 243 ~~ 244 (615)
T 1pgu_A 243 KY 244 (615)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 145
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=77.62 E-value=34 Score=29.48 Aligned_cols=108 Identities=10% Similarity=0.038 Sum_probs=60.9
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCe
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSW 282 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W 282 (366)
+|.+||..... ..|..+|+.+.+...+..|... ......-+|++.+... . . |+.++.. ..+.
T Consensus 60 ~~~l~~~d~~~------~~i~~~d~~~~~~~~~~~~~~v----~~i~~~~dg~l~v~~~--~--g--l~~~d~~--~g~~ 121 (326)
T 2ghs_A 60 SGTAWWFNILE------RELHELHLASGRKTVHALPFMG----SALAKISDSKQLIASD--D--G--LFLRDTA--TGVL 121 (326)
T ss_dssp TTEEEEEEGGG------TEEEEEETTTTEEEEEECSSCE----EEEEEEETTEEEEEET--T--E--EEEEETT--TCCE
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEECCCcc----eEEEEeCCCeEEEEEC--C--C--EEEEECC--CCcE
Confidence 37899987664 3799999999888777665322 2222234688877652 2 3 5555532 2334
Q ss_pred eEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-------CCeEEEEECCCCcEEEE
Q 017755 283 SKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-------SRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 283 ~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-------~~~l~~ydl~t~~~~~v 333 (366)
..+..... .. ......-+.+.++|. +++... ...++.|| +++.+.+
T Consensus 122 ~~~~~~~~-~~-~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 122 TLHAELES-DL-PGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp EEEECSST-TC-TTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred EEEeeCCC-CC-CCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 33322111 01 111344566777887 666543 13588888 5666654
No 146
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=77.02 E-value=35 Score=29.34 Aligned_cols=204 Identities=10% Similarity=0.053 Sum_probs=93.7
Q ss_pred cccceEEeee-cCceEEEEcCCCc--ceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEE
Q 017755 99 CCHGLLAMFN-RRLGMSVFNPTTK--KFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIY 175 (366)
Q Consensus 99 s~nGLl~~~~-~~~~~~V~NP~t~--~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vy 175 (366)
+.+|-+.+.+ ....+.++|+..+ ....+....... .. ........++.+||..+...|.-- .....+.+|
T Consensus 99 d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g-~~-~~~~~~P~~ia~~~~~g~lyv~d~-----~~~~~I~~~ 171 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPG-SD-QNHFCQPTDVAVEPSTGAVFVSDG-----YCNSRIVQF 171 (329)
T ss_dssp CTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCC-CS-TTCCSSEEEEEECTTTCCEEEEEC-----SSCCEEEEE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCC-CC-ccccCCCcEEEEeCCCCeEEEEeC-----CCCCeEEEE
Confidence 3455554444 3567888888665 334443211100 00 000224567888885444333320 124567777
Q ss_pred EcCCCcEEecCCCC------ceeecCCCCceEE--C-CeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCe
Q 017755 176 SLKADTWRRTREFP------YYILDDRCNGVFI--A-GALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGF 245 (366)
Q Consensus 176 ss~~~~W~~~~~~p------~~~~~~~~~~v~~--~-G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~ 245 (366)
+.....-+.+.... .... ....++.+ + |.+|+..... ..|..||+.+.++ ..+..+.....
T Consensus 172 ~~~g~~~~~~~~~g~~~~~~~~~~-~~p~gia~d~~~g~l~v~d~~~------~~I~~~~~~~G~~~~~~~~~~~~~~-- 242 (329)
T 3fvz_A 172 SPSGKFVTQWGEESSGSSPRPGQF-SVPHSLALVPHLDQLCVADREN------GRIQCFKTDTKEFVREIKHASFGRN-- 242 (329)
T ss_dssp CTTSCEEEEECEECCSSSCCTTEE-SCEEEEEEETTTTEEEEEETTT------TEEEEEETTTCCEEEEECCTTTTTC--
T ss_pred cCCCCEEEEeccCCCCCCCCCccc-CCCcEEEEECCCCEEEEEECCC------CEEEEEECCCCcEEEEEeccccCCC--
Confidence 75443222222100 0011 11124555 4 7888776554 4899999985555 44555533221
Q ss_pred eeEEEEECCEEEEEEecC-----CCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-Ce
Q 017755 246 CSQVGVLRGCLWINSYYH-----DEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RC 319 (366)
Q Consensus 246 ~~~l~~~~G~L~~v~~~~-----~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~ 319 (366)
...+....|.++...... ....+.+|.++. .+. +..+....- ......-+++.++|. +|+.... ..
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~----g~~--~~~~~~~~~-~~~~p~~ia~~~dG~-lyvad~~~~~ 314 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS----GEI--IDVFKPVRK-HFDMPHDIVASEDGT-VYIGDAHTNT 314 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT----CCE--EEEECCSSS-CCSSEEEEEECTTSE-EEEEESSSCC
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC----CeE--EEEEcCCCC-ccCCeeEEEECCCCC-EEEEECCCCE
Confidence 222333335554444321 112455665543 222 233321110 001344567777774 6665432 33
Q ss_pred EEEEECC
Q 017755 320 LHWYNLK 326 (366)
Q Consensus 320 l~~ydl~ 326 (366)
+..|+++
T Consensus 315 I~~~~~~ 321 (329)
T 3fvz_A 315 VWKFTLT 321 (329)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 6666654
No 147
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=76.64 E-value=76 Score=33.03 Aligned_cols=194 Identities=12% Similarity=0.097 Sum_probs=96.2
Q ss_pred cccce-EEeeecCceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEE
Q 017755 99 CCHGL-LAMFNRRLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYS 176 (366)
Q Consensus 99 s~nGL-l~~~~~~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vys 176 (366)
+.+|- +.....++.+.|||..|++... +... ......+.+.|. +++-+.+ . ....+.+++
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h-----------~~~v~~~~~s~~-~~~l~s~--~----~d~~v~vwd 685 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAH-----------EDEVLCCAFSSD-DSYIATC--S----ADKKVKIWD 685 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-----------SSCEEEEEECTT-SSEEEEE--E----TTSEEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccC-----------CCCEEEEEEecC-CCEEEEE--e----CCCeEEEEE
Confidence 44554 4444567789999999987643 3311 112334566654 2332222 1 234588888
Q ss_pred cCCCcEEec-CCCCceeecCCCCceEE----CCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEE
Q 017755 177 LKADTWRRT-REFPYYILDDRCNGVFI----AGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVG 250 (366)
Q Consensus 177 s~~~~W~~~-~~~p~~~~~~~~~~v~~----~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~ 250 (366)
..++.-... ..-.... ..+.+ ++.+...+..+ ..|..+|+.+.+.... ..... ....+.
T Consensus 686 ~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~~l~sg~~d------~~v~vwd~~~~~~~~~~~~h~~----~v~~~~ 750 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQV-----NCCHFTNKSNHLLLATGSND------FFLKLWDLNQKECRNTMFGHTN----SVNHCR 750 (1249)
T ss_dssp TTTCCEEEEEECCSSCE-----EEEEECSSSSCCEEEEEETT------SCEEEEETTSSSEEEEECCCSS----CEEEEE
T ss_pred CCCCceEEEEcCCCCcE-----EEEEEecCCCceEEEEEeCC------CeEEEEECCCcchhheecCCCC----CEEEEE
Confidence 887643221 1100000 11222 22222222222 3688999987765432 22111 122222
Q ss_pred EE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCC-------C--cceeEEEEEEeCCCeEEEEEcCCeE
Q 017755 251 VL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHE-------T--CYYTEAFAFSKDGDKALIYQHSRCL 320 (366)
Q Consensus 251 ~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~-------~--~~~~~~~~~~~~g~~i~l~~~~~~l 320 (366)
.. +|+..+...... .+.+|-+.... ....+...... . .....-+.+.++|+.++... ++.+
T Consensus 751 ~sp~~~~l~s~s~dg--~v~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v 821 (1249)
T 3sfz_A 751 FSPDDELLASCSADG--TLRLWDVRSAN------ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKV 821 (1249)
T ss_dssp ECSSTTEEEEEESSS--EEEEEEGGGTE------EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEE
T ss_pred EecCCCEEEEEECCC--eEEEEeCCCCc------ccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcE
Confidence 22 455555544444 79999887521 12222221110 0 00233356678888565554 5569
Q ss_pred EEEECCCCcEEEEE
Q 017755 321 HWYNLKDHKQDVIE 334 (366)
Q Consensus 321 ~~ydl~t~~~~~v~ 334 (366)
..||+.++......
T Consensus 822 ~~~d~~~~~~~~~~ 835 (1249)
T 3sfz_A 822 LLFDIHTSGLLAEI 835 (1249)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEEEecCCCceeEE
Confidence 99999998865553
No 148
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=76.53 E-value=42 Score=29.95 Aligned_cols=65 Identities=12% Similarity=0.238 Sum_probs=39.9
Q ss_pred CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcE
Q 017755 254 GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 254 G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
|.+.+...... .+.+|-+... ..+..+....- ...-+.+.++|..++-...++.+.+||+++++.
T Consensus 308 g~~l~sgs~D~--~i~iwd~~~~------~~~~~~~~h~~----~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 308 GPFLLSGSRDK--TIKMWDVSTG------MCLMTLVGHDN----WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp CCEEEEEETTS--EEEEEETTTT------EEEEEEECCSS----CEEEEEECSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred CCEEEEEeCCC--eEEEEECCCC------ceEEEEECCCC----cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce
Confidence 44444444333 7999987641 12333321110 244567888888676666777899999988764
No 149
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=76.26 E-value=35 Score=29.01 Aligned_cols=106 Identities=8% Similarity=0.079 Sum_probs=59.6
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCC
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQS 281 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~ 281 (366)
+|.+||..... ..|..+|+.++.-..+..+.. -..++.. +|+|+++..... ...|+.++.. ..+
T Consensus 42 ~g~lyv~d~~~------~~I~~~d~~g~~~~~~~~~~~-----p~gia~~~dG~l~vad~~~~--~~~v~~~d~~--~g~ 106 (306)
T 2p4o_A 42 DGTIFVTNHEV------GEIVSITPDGNQQIHATVEGK-----VSGLAFTSNGDLVATGWNAD--SIPVVSLVKS--DGT 106 (306)
T ss_dssp TSCEEEEETTT------TEEEEECTTCCEEEEEECSSE-----EEEEEECTTSCEEEEEECTT--SCEEEEEECT--TSC
T ss_pred CCCEEEEeCCC------CeEEEECCCCceEEEEeCCCC-----ceeEEEcCCCcEEEEeccCC--cceEEEEcCC--CCe
Confidence 68899987544 379999998765444455422 2234443 588877765433 3467776532 234
Q ss_pred eeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEECCCCc
Q 017755 282 WSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNLKDHK 329 (366)
Q Consensus 282 W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t~~ 329 (366)
...+..+..... ..-.+.++++ .+++... ...++.+|+.+++
T Consensus 107 ~~~~~~~~~~~~-----~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 107 VETLLTLPDAIF-----LNGITPLSDT-QYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp EEEEEECTTCSC-----EEEEEESSSS-EEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEeCCCccc-----cCcccccCCC-cEEEEECCCCeEEEEeCCCCc
Confidence 544444322111 1222334444 3666553 4569999998764
No 150
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=76.21 E-value=34 Score=28.80 Aligned_cols=187 Identities=14% Similarity=0.115 Sum_probs=89.0
Q ss_pred eEEeeecCceEEEEcCCCcceE-ecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCC-
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFK-LFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKAD- 180 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~-~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~- 180 (366)
++........++++|+.|++.+ +++...... .......|. + +++. . ....+..|+. ++
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~----------~~~~~~~pd-G--~ilv-s-----~~~~V~~~d~-~G~ 66 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWE----------CNSVAATKA-G--EILF-S-----YSKGAKMITR-DGR 66 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCC----------CCEEEECTT-S--CEEE-E-----CBSEEEEECT-TSC
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCC----------CcCeEECCC-C--CEEE-e-----CCCCEEEECC-CCC
Confidence 3333334667899999888864 344322111 011233443 2 2333 1 1234777777 43
Q ss_pred -cEEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCC--eeeEE-EEECCEE
Q 017755 181 -TWRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGG--FCSQV-GVLRGCL 256 (366)
Q Consensus 181 -~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~--~~~~l-~~~~G~L 256 (366)
.|+.-..-..... ...+.-+|.++....... ..+++||...+....+.+....... ....+ ...+|.+
T Consensus 67 ~~W~~~~~~~~~~~---~~~~~~dG~~lv~~~~~~-----~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~ 138 (276)
T 3no2_A 67 ELWNIAAPAGCEMQ---TARILPDGNALVAWCGHP-----STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY 138 (276)
T ss_dssp EEEEEECCTTCEEE---EEEECTTSCEEEEEESTT-----EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCE
T ss_pred EEEEEcCCCCcccc---ccEECCCCCEEEEecCCC-----CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCE
Confidence 6775432111111 113455777776655412 4789999876544444332221000 01111 1224665
Q ss_pred EEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEE
Q 017755 257 WINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 257 ~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
.++..... .+..|-.+ + +..|... ..... .. ..+.++|+.++......+++.+|++|++..
T Consensus 139 lv~~~~~~--~v~~~d~~--G-~~~w~~~--~~~~~-----~~--~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 139 LVPLFATS--EVREIAPN--G-QLLNSVK--LSGTP-----FS--SAFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp EEEETTTT--EEEEECTT--S-CEEEEEE--CSSCC-----CE--EEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred EEEecCCC--EEEEECCC--C-CEEEEEE--CCCCc-----cc--eeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 55444322 44444433 2 3445432 22111 11 344567884444444557999999987753
No 151
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=75.97 E-value=58 Score=31.36 Aligned_cols=228 Identities=9% Similarity=0.069 Sum_probs=115.6
Q ss_pred ceEEEeeccCCCCeeEEecCCCCCCceeeccCCccCCCCceEEEecccceEEeee-cCceEEEEcCCCcceEecCCCCCC
Q 017755 54 GLSLIVPTLTSDNKFFSLELDSVDNPVEIEYPFKKYNRGHTSVIGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSD 132 (366)
Q Consensus 54 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~ 132 (366)
.++|++ .....+..++++.... ....|+.........-.+..+|.|..++ ....+..+++.......+-.....
T Consensus 6 ~~~Ll~---s~~~~I~~i~l~~~~~--~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 6 EAFLLF---SRRADIRRISLETNNN--NVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp CCEEEE---EETTEEEEEESSCTTC--EEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred CcEEEE---EeCCcEEEEECCCCCc--ceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence 356666 3355566655554322 1222332211111123345567776665 355677777765543333222211
Q ss_pred CccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecC--CCCceeecCCCCceEE---CCeEE
Q 017755 133 CYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTR--EFPYYILDDRCNGVFI---AGALH 207 (366)
Q Consensus 133 ~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~--~~p~~~~~~~~~~v~~---~G~ly 207 (366)
...++++|+..++-.+. + .....++++++.+..=+.+. .+. ...++.+ +|.||
T Consensus 81 ----------~P~GlAvD~~~~~LY~t----D--~~~~~I~v~~~dG~~~~~l~~~~l~------~P~~iavdp~~G~lY 138 (628)
T 4a0p_A 81 ----------YPEGMAVDWLGKNLYWA----D--TGTNRIEVSKLDGQHRQVLVWKDLD------SPRALALDPAEGFMY 138 (628)
T ss_dssp ----------CCCEEEEETTTTEEEEE----E--TTTTEEEEEETTSTTCEEEECSSCC------CEEEEEEETTTTEEE
T ss_pred ----------CcceEEEEeCCCEEEEE----E--CCCCEEEEEecCCCcEEEEEeCCCC------CcccEEEccCCCeEE
Confidence 23467888765542221 1 23456788887654322221 111 1124444 69999
Q ss_pred EEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEE
Q 017755 208 WLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKL 285 (366)
Q Consensus 208 w~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~ 285 (366)
|...... ..|..+|+....-+.+-- ... .-..|+.. +++||++..... .|+..+-.+. .. ++
T Consensus 139 ~tD~g~~-----~~I~r~~~dG~~~~~l~~--~~~--~P~GlalD~~~~~LY~aD~~~~----~I~~~d~dG~-~~--~v 202 (628)
T 4a0p_A 139 WTEWGGK-----PKIDRAAMDGSERTTLVP--NVG--RANGLTIDYAKRRLYWTDLDTN----LIESSNMLGL-NR--EV 202 (628)
T ss_dssp EEECSSS-----CEEEEEETTSCSCEEEEC--SCS--SEEEEEEETTTTEEEEEETTTT----EEEEEETTSC-SC--EE
T ss_pred EeCCCCC-----CEEEEEeCCCCceEEEEC--CCC--CcceEEEccccCEEEEEECCCC----EEEEEcCCCC-ce--EE
Confidence 9875322 489999998665544321 111 11233333 689999887443 4666664332 22 22
Q ss_pred EEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEECCCCcEEE
Q 017755 286 CSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNLKDHKQDV 332 (366)
Q Consensus 286 ~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t~~~~~ 332 (366)
. . ..+ ..|.++.-+++.+|+... ...+...|..+++-..
T Consensus 203 ~--~-~~l-----~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 203 I--A-DDL-----PHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRT 242 (628)
T ss_dssp E--E-ECC-----SCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred e--e-ccC-----CCceEEEEECCEEEEecCCCCEEEEEECCCCCceE
Confidence 1 1 111 345555544566888764 3469999988776433
No 152
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=75.16 E-value=43 Score=29.43 Aligned_cols=102 Identities=10% Similarity=0.202 Sum_probs=57.2
Q ss_pred ceEEEEECCCceeEE-EC--CCCCCCCCeeeEEEE--ECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCC
Q 017755 220 NMILAFDLKSEKFYE-VQ--QPHGMKGGFCSQVGV--LRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHE 294 (366)
Q Consensus 220 ~~i~~fD~~~e~~~~-i~--~P~~~~~~~~~~l~~--~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 294 (366)
..|..+|+.+.+-.. +. .|..... ....+.. .++.+.+...... .+.+|-+.... . .+..+....
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~sgs~D~--~v~~wd~~~~~--~---~~~~~~~h~-- 249 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTA-DVLSLSINSLNANMFISGSCDT--TVRLWDLRITS--R---AVRTYHGHE-- 249 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCS-CEEEEEECSSSCCEEEEEETTS--CEEEEETTTTC--C---CCEEECCCS--
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCcc-CeEEEEeecCCCCEEEEEECCC--eEEEEECCCCC--c---ceEEECCcC--
Confidence 378889998876533 32 2222111 1222322 2566666655544 79999886321 1 112221111
Q ss_pred CcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 295 TCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 295 ~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
. ...-+.+.++|..++-...++.+.+||+++++...+
T Consensus 250 ~--~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 250 G--DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp S--CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred C--CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 0 244577888998555555667799999999875443
No 153
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=75.15 E-value=43 Score=29.49 Aligned_cols=100 Identities=18% Similarity=0.263 Sum_probs=54.5
Q ss_pred ceEEEEECCCce--eEEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCC-CCc
Q 017755 220 NMILAFDLKSEK--FYEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLH-ETC 296 (366)
Q Consensus 220 ~~i~~fD~~~e~--~~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-~~~ 296 (366)
..|..+|+.+.+ ...+...... ....+..-+|++.+...... .+.+|.+...+... ....+..... ...
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~l~s~~~d~--~v~iw~~~~~~~~~---~~~~~~~~~~~~~~ 384 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEGT---PINNVYFAAGALFVSSGFDT--SIKLDIISDPESER---PAIEFETPTFLVSN 384 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTTS---CEEEEEEETTEEEEEETTTE--EEEEEEECCTTCCS---CEECTTSCEEECCS
T ss_pred CeEEEEEcCCCcCchhhhhccCCC---CceEEEeCCCCEEEEecCCc--cEEEEeccCCCCCc---cceeccCccEEccC
Confidence 379999998753 3334332221 13333444777555544333 79999998632211 1111111111 010
Q ss_pred c-eeEEEEEEeCCC---eEEEEEcCCeEEEEECCC
Q 017755 297 Y-YTEAFAFSKDGD---KALIYQHSRCLHWYNLKD 327 (366)
Q Consensus 297 ~-~~~~~~~~~~g~---~i~l~~~~~~l~~ydl~t 327 (366)
. ...-+++.++|. .++....++.+..|++++
T Consensus 385 ~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 385 DDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp SCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred CcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 1 344577778777 677777777799999865
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=75.06 E-value=41 Score=29.11 Aligned_cols=105 Identities=13% Similarity=0.126 Sum_probs=51.8
Q ss_pred eEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecC-CCCC--Cc
Q 017755 221 MILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSK-MLHE--TC 296 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~-~~~~--~~ 296 (366)
.+..+|..+.+.+.+ ..+.... .-..+.. +|+..++..... ..+.+|.++..+.-........... ...+ ..
T Consensus 78 ~~~~~~~~~g~~~~~~~~~~~~~--~p~~~~~-dg~~l~~~~~~~-~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~ 153 (361)
T 3scy_A 78 SAFAFDKEKGTLHLLNTQKTMGA--DPCYLTT-NGKNIVTANYSG-GSITVFPIGQDGALLPASDVIEFKGSGPDKERQT 153 (361)
T ss_dssp EEEEEETTTTEEEEEEEEECSSS--CEEEEEE-CSSEEEEEETTT-TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCS
T ss_pred EEEEEeCCCCcEEEeeEeccCCC--CcEEEEE-CCCEEEEEECCC-CEEEEEEeCCCCcCcccceeEEccCCCCCccccC
Confidence 334455555666655 3332221 1233444 766444443322 3799999975322111111111111 1110 00
Q ss_pred c-eeEEEEEEeCCCeEEEEEc-CCeEEEEECCCCc
Q 017755 297 Y-YTEAFAFSKDGDKALIYQH-SRCLHWYNLKDHK 329 (366)
Q Consensus 297 ~-~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t~~ 329 (366)
. ..+-+++.++|+.+++... +..+.+|+++.+.
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~ 188 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNA 188 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTC
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCC
Confidence 0 3466888999997777664 4568888776543
No 155
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=74.73 E-value=69 Score=31.61 Aligned_cols=206 Identities=13% Similarity=0.148 Sum_probs=101.8
Q ss_pred ecccceEEeeecCceEEEEcCCCcceEecCCCCCCCcc-CCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEE
Q 017755 98 GCCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYT-DYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYS 176 (366)
Q Consensus 98 ~s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~-~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vys 176 (366)
...+|-|-+......+..+||.++++..++...... . ... ......+..|+.. +++.+.. ..-.+..|+
T Consensus 364 ~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~-~~~l~--~~~v~~i~~d~~g---~~lWigt----~~~Gl~~~d 433 (795)
T 4a2l_A 364 EDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDES-ARGIG--SNNIKAVYVDEKK---SLVYIGT----HAGGLSILH 433 (795)
T ss_dssp ECTTSCEEEEESSSCEEEECTTTCCEEEECCC-------CCS--CSCEEEEEEETTT---TEEEEEE----TTTEEEEEE
T ss_pred ECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCc-ccCCC--CccEEEEEEcCCC---CEEEEEe----CcCceeEEe
Confidence 334555544434456888888888877665432110 0 000 1112234444321 1122221 123567888
Q ss_pred cCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCC---CCCCCCeeeEEEE
Q 017755 177 LKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQP---HGMKGGFCSQVGV 251 (366)
Q Consensus 177 s~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P---~~~~~~~~~~l~~ 251 (366)
..++.++...............++.. +|.+ |++... .+..||..+++|+.+... ..........+.+
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-wigt~~-------Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 505 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNL-WLGTLS-------ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFR 505 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCE-EEEESS-------CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEE
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCE-EEEecC-------ceeEEeCCCCeEEEccccccccccCCceEEEEEE
Confidence 88887776542111111111112333 3554 555543 599999999999877432 1221112334444
Q ss_pred E-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEe-cCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCc
Q 017755 252 L-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSF-SKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 252 ~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~ 329 (366)
. +|.|++.+. . .+..+..+. ..+ ..... ....++. ....-+...++|. +++.+.. +++.||+++++
T Consensus 506 d~~g~lWigt~-~---Gl~~~~~~~----~~~-~~~~~~~~~~l~~-~~i~~i~~d~~g~-lWigT~~-Gl~~~d~~~~~ 573 (795)
T 4a2l_A 506 DSHKRLWIGGE-E---GLSVFKQEG----LDI-QKASILPVSNVTK-LFTNCIYEASNGI-IWVGTRE-GFYCFNEKDKQ 573 (795)
T ss_dssp CTTCCEEEEES-S---CEEEEEEET----TEE-EECCCSCSCGGGG-SCEEEEEECTTSC-EEEEESS-CEEEEETTTTE
T ss_pred CCCCCEEEEeC-C---ceEEEeCCC----CeE-EEecCCCCCCCCC-CeeEEEEECCCCC-EEEEeCC-CceeECCCCCc
Confidence 4 588888775 2 355554432 334 21100 1111111 1223333444666 7777766 59999999998
Q ss_pred EEEE
Q 017755 330 QDVI 333 (366)
Q Consensus 330 ~~~v 333 (366)
++..
T Consensus 574 ~~~~ 577 (795)
T 4a2l_A 574 IKRY 577 (795)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8765
No 156
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=74.39 E-value=41 Score=28.89 Aligned_cols=195 Identities=9% Similarity=0.040 Sum_probs=94.3
Q ss_pred EecccceEEeee-cCceEEEEcCCC----cc-eEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEeccccee
Q 017755 97 IGCCHGLLAMFN-RRLGMSVFNPTT----KK-FKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYL 170 (366)
Q Consensus 97 ~~s~nGLl~~~~-~~~~~~V~NP~t----~~-~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~ 170 (366)
.+..+|.|...+ ....++.+++.+ .. ...++.. .. ...++.+|+..+...+.- ...-
T Consensus 37 ~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~----------~p~glavd~~~~~ly~~d------~~~~ 99 (316)
T 1ijq_A 37 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-IQ----------APDGLAVDWIHSNIYWTD------SVLG 99 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC--------CEEEECSS-CS----------CCCEEEEETTTTEEEEEE------TTTT
T ss_pred EEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC-CC----------CcCEEEEeecCCeEEEEE------CCCC
Confidence 344566666655 356788888876 22 2223211 11 123677776544322221 1234
Q ss_pred EEEEEEcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCee
Q 017755 171 EVIIYSLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFC 246 (366)
Q Consensus 171 ~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~ 246 (366)
.++++++.+..=+.+..... ....++.+ +|.+||...... ..|..+|+....-..+ .. ... .-
T Consensus 100 ~I~~~~~~g~~~~~~~~~~~----~~P~~iavdp~~g~ly~~d~~~~-----~~I~~~~~dG~~~~~~~~~--~~~--~P 166 (316)
T 1ijq_A 100 TVSVADTKGVKRKTLFRENG----SKPRAIVVDPVHGFMYWTDWGTP-----AKIKKGGLNGVDIYSLVTE--NIQ--WP 166 (316)
T ss_dssp EEEEEETTSSSEEEEEECTT----CCEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCCEEEEECS--SCS--CE
T ss_pred EEEEEeCCCCceEEEEECCC----CCcceEEeCCCCCEEEEEccCCC-----CeEEEEcCCCCCeEEEEEC--CCC--Cc
Confidence 56677776543222211000 01123433 689999875421 3799999876544433 21 111 12
Q ss_pred eEEEEE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEE
Q 017755 247 SQVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWY 323 (366)
Q Consensus 247 ~~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~y 323 (366)
..|+.. +|+||++..... .|++.+-.+. .. ..+.... ..+ ..|.++.-+++.+|+.... ..+..+
T Consensus 167 ~gla~d~~~~~lY~~D~~~~----~I~~~d~dg~-~~-~~~~~~~-~~~-----~~P~giav~~~~ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKLH----SISSIDVNGG-NR-KTILEDE-KRL-----AHPFSLAVFEDKVFWTDIINEAIFSA 234 (316)
T ss_dssp EEEEEETTTTEEEEEETTTT----EEEEEETTSC-SC-EEEEECT-TTT-----SSEEEEEEETTEEEEEETTTTEEEEE
T ss_pred eEEEEeccCCEEEEEECCCC----eEEEEecCCC-ce-EEEeecC-Ccc-----CCcEEEEEECCEEEEEECCCCeEEEE
Confidence 244444 688998876433 4555553221 11 1111111 111 2344443344558887643 469999
Q ss_pred ECCCCcE-EEE
Q 017755 324 NLKDHKQ-DVI 333 (366)
Q Consensus 324 dl~t~~~-~~v 333 (366)
|..+++. +.+
T Consensus 235 ~~~~g~~~~~i 245 (316)
T 1ijq_A 235 NRLTGSDVNLL 245 (316)
T ss_dssp ETTTCCCCEEE
T ss_pred eCCCCcceEEE
Confidence 9987764 444
No 157
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=74.38 E-value=38 Score=28.48 Aligned_cols=101 Identities=16% Similarity=0.240 Sum_probs=59.0
Q ss_pred eEEEEECCCc--eeEEE-CCCCCCCCCeeeEEEEE---CCEEEEEEecCCCCeEEEEEEeecC---CCCCeeEEEEecCC
Q 017755 221 MILAFDLKSE--KFYEV-QQPHGMKGGFCSQVGVL---RGCLWINSYYHDEPRCDIWVMKEYG---SQQSWSKLCSFSKM 291 (366)
Q Consensus 221 ~i~~fD~~~e--~~~~i-~~P~~~~~~~~~~l~~~---~G~L~~v~~~~~~~~l~iW~l~~~~---~~~~W~~~~~i~~~ 291 (366)
.|..+|+.++ .+..+ .+..+. ..-..+.-. +|.+.+...... .+.+|-++... ....|.....+...
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~d~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T 3f3f_A 34 HIKVFKLDKDTSNWELSDSWRAHD--SSIVAIDWASPEYGRIIASASYDK--TVKLWEEDPDQEECSGRRWNKLCTLNDS 109 (351)
T ss_dssp EEEEEEECSSSCCEEEEEEEECCS--SCEEEEEECCGGGCSEEEEEETTS--CEEEEEECTTSCTTSSCSEEEEEEECCC
T ss_pred eEEEEECCCCCCcceecceeccCC--CcEEEEEEcCCCCCCEEEEEcCCC--eEEEEecCCCcccccccCcceeeeeccc
Confidence 6778887754 22222 111111 112233333 266655555444 69999997532 12456666665432
Q ss_pred CCCCcceeEEEEEEeC--CCeEEEEEcCCeEEEEECCCCc
Q 017755 292 LHETCYYTEAFAFSKD--GDKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 292 ~~~~~~~~~~~~~~~~--g~~i~l~~~~~~l~~ydl~t~~ 329 (366)
.- ...-+.+.++ +..++....++.+.+||+++++
T Consensus 110 ~~----~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 110 KG----SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp SS----CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CC----ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 21 3555777787 8867666777789999998876
No 158
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=74.19 E-value=57 Score=30.42 Aligned_cols=135 Identities=9% Similarity=-0.003 Sum_probs=71.3
Q ss_pred eeEEEEEEcCCCcEEe--cCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCC
Q 017755 169 YLEVIIYSLKADTWRR--TREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGG 244 (366)
Q Consensus 169 ~~~~~vyss~~~~W~~--~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~ 244 (366)
.-.+.+|+..++.... ...-.... ..+.+ +|.+...+..+ ..|..+|+.+.+.... +... +..
T Consensus 466 d~~i~~~~~~~~~~~~~~~~~~~~~v-----~~~~~s~~g~~l~~~~~d------g~i~iw~~~~~~~~~~-~~~~-h~~ 532 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSFDLKTPLRAKP-----SYISISPSETYIAAGDVM------GKILLYDLQSREVKTS-RWAF-RTS 532 (615)
T ss_dssp TSCEEEEETTEEEEEEECSSCCSSCE-----EEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEC-CSCC-CSS
T ss_pred CCeEEEEECCCccccccccCCccCce-----EEEEECCCCCEEEEcCCC------CeEEEeeCCCCcceeE-eecC-CCC
Confidence 3457777777665432 11111111 12222 66655555544 3799999987665332 2210 111
Q ss_pred eeeEEEEE-----------CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEE
Q 017755 245 FCSQVGVL-----------RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALI 313 (366)
Q Consensus 245 ~~~~l~~~-----------~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l 313 (366)
.-..+.-. +|++.+...... .+.+|.++... ..+..+.... . ...-+.+.++|. ++.
T Consensus 533 ~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~-----~~~~~~~~h~--~--~v~~l~~s~~~~-l~s 600 (615)
T 1pgu_A 533 KINAISWKPAEKGANEEEIEEDLVATGSLDT--NIFIYSVKRPM-----KIIKALNAHK--D--GVNNLLWETPST-LVS 600 (615)
T ss_dssp CEEEEEECCCC------CCSCCEEEEEETTS--CEEEEESSCTT-----CCEEETTSST--T--CEEEEEEEETTE-EEE
T ss_pred ceeEEEEcCccccccccccCCCEEEEEcCCC--cEEEEECCCCc-----eechhhhcCc--c--ceEEEEEcCCCC-eEE
Confidence 12222222 566655555444 79999998631 1223222111 1 355578889998 777
Q ss_pred EEcCCeEEEEECCCC
Q 017755 314 YQHSRCLHWYNLKDH 328 (366)
Q Consensus 314 ~~~~~~l~~ydl~t~ 328 (366)
...++.+.+||++++
T Consensus 601 ~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 601 SGADACIKRWNVVLE 615 (615)
T ss_dssp EETTSCEEEEEEC--
T ss_pred ecCCceEEEEeeecC
Confidence 777777999998764
No 159
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=74.18 E-value=37 Score=30.95 Aligned_cols=71 Identities=11% Similarity=0.135 Sum_probs=47.9
Q ss_pred CCEEEEEEecCCC-----CeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCC-eEEEEEc-CCeEEEEEC
Q 017755 253 RGCLWINSYYHDE-----PRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGD-KALIYQH-SRCLHWYNL 325 (366)
Q Consensus 253 ~G~L~~v~~~~~~-----~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~-~i~l~~~-~~~l~~ydl 325 (366)
+++|++....... ..=.||++|- .++..+.+|.... ...-+.+.++|+ .+|.... +..+.++|.
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~----~T~kvv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID~ 400 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNA----ETGERINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYDA 400 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEET----TTCCEEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred CCEEEEEecccccccccCCCCEEEEEEC----CCCeEEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence 4678887653210 1347899884 4577777776543 244477889998 7777663 567999999
Q ss_pred CCCcEEE
Q 017755 326 KDHKQDV 332 (366)
Q Consensus 326 ~t~~~~~ 332 (366)
+|++...
T Consensus 401 ~t~kvv~ 407 (426)
T 3c75_H 401 ATGEELR 407 (426)
T ss_dssp TTCCEEE
T ss_pred CCCCEEE
Confidence 9998643
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=74.09 E-value=44 Score=29.08 Aligned_cols=213 Identities=14% Similarity=0.079 Sum_probs=96.0
Q ss_pred eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEec-----------------
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSY----------------- 165 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~----------------- 165 (366)
.|.+......++++|+.+++...+-..+... .....+..++. .-+++.+....
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~--------~~~~~~~~~~d--g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEW--------VGYGTWVANSD--CTKLVGIEIRREDWVPLTDWKKFHEFYF 163 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTE--------EEEEEEEECTT--SSEEEEEEEEGGGCCCCCSHHHHHHHGG
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeechhhc--------ccccceeECCC--CCeeccccccCcccccccccchhhhhhc
Confidence 4544444568999999999876653332211 11112222332 22233332221
Q ss_pred ccceeEEEEEEcCCCcEEecCCCCceeecCCCCceEE-CCe-EEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCC
Q 017755 166 KVDYLEVIIYSLKADTWRRTREFPYYILDDRCNGVFI-AGA-LHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKG 243 (366)
Q Consensus 166 ~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~-~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~ 243 (366)
......+.+++..++.-+.+..-+.... .....- +|. +.+... .........|..+|+.+.+...+.-... .
T Consensus 164 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~---~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~~~~--~ 237 (388)
T 3pe7_A 164 TKPCCRLMRVDLKTGESTVILQENQWLG---HPIYRPYDDSTVAFCHE-GPHDLVDARMWLINEDGTNMRKVKTHAE--G 237 (388)
T ss_dssp GCCCEEEEEEETTTCCEEEEEEESSCEE---EEEEETTEEEEEEEEEC-SCTTTSSCSEEEEETTSCCCEESCCCCT--T
T ss_pred cCCcceEEEEECCCCceEEeecCCcccc---ccEECCCCCCEEEEEEe-cCCCCCcceEEEEeCCCCceEEeeeCCC--C
Confidence 1233677888888876555432111110 001222 444 333332 2111112478889988776655422111 0
Q ss_pred CeeeEEEEE-CCE-EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEE------
Q 017755 244 GFCSQVGVL-RGC-LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQ------ 315 (366)
Q Consensus 244 ~~~~~l~~~-~G~-L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~------ 315 (366)
.......-. +|+ |+++..........||+++-.. .+-..+........... ......+.++|+.+++..
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~--g~~~~l~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~ 314 (388)
T 3pe7_A 238 ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET--LENRQLTSMPACSHLMS-NYDGSLMVGDGSDAPVDVQDDSGY 314 (388)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT--CCEEEEEEECCEEEEEE-CTTSSEEEEEECCC----------
T ss_pred cccccceECCCCCEEEEEecCCCCCcceEEEEecCC--CceEEEEcCCCceeeee-cCCCCeEccCCCcceeEeeecccc
Confidence 011122222 454 6666554433233466665322 22223332221000000 000024677887666543
Q ss_pred ---cCCeEEEEECCCCcEEEEE
Q 017755 316 ---HSRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 316 ---~~~~l~~ydl~t~~~~~v~ 334 (366)
....++.+|+++++.+.+.
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 315 KIENDPFLYVFNMKNGTQHRVA 336 (388)
T ss_dssp --CCCCEEEEEETTTTEEEEEE
T ss_pred ccCCCCEEEEEeccCCceEEec
Confidence 2336999999999987774
No 161
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=73.97 E-value=45 Score=29.16 Aligned_cols=97 Identities=12% Similarity=0.141 Sum_probs=55.3
Q ss_pred ceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc
Q 017755 220 NMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY 297 (366)
Q Consensus 220 ~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 297 (366)
..|..+|+.+.+.. .+..... ....+... +|++.++..... .+.+|.+.... .+..+....-
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~------~~~~~~~~~~---- 290 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHG----PISVLEFNDTNKLLLSASDDG--TLRIWHGGNGN------SQNCFYGHSQ---- 290 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSS----CEEEEEEETTTTEEEEEETTS--CEEEECSSSBS------CSEEECCCSS----
T ss_pred CeEEEEEcCCCceeeeeccCCC----ceEEEEECCCCCEEEEEcCCC--EEEEEECCCCc------cceEecCCCc----
Confidence 37999999876543 2332111 12233333 455544444333 69999887521 1222221111
Q ss_pred eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 298 YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
...-+.+.++| .++....++.+.+||+++++....
T Consensus 291 ~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 291 SIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred cEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEe
Confidence 24556777777 566667777899999998875443
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=73.96 E-value=44 Score=29.06 Aligned_cols=105 Identities=9% Similarity=-0.008 Sum_probs=53.9
Q ss_pred ceEEEEECCCceeEEECCCCCCCCCeeeEEEEECC-EEEEEEecCC-CCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc
Q 017755 220 NMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVLRG-CLWINSYYHD-EPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY 297 (366)
Q Consensus 220 ~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~~G-~L~~v~~~~~-~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 297 (366)
..|..+|+.+.+...+...... .....+.-.+| +|.++..... ....+||.++..+ ... ..+.... ...
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~~--~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~---~~l~~~~--~~~ 238 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQW--LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--TNM---RKVKTHA--EGE 238 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESSC--EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--CCC---EESCCCC--TTE
T ss_pred ceEEEEECCCCceEEeecCCcc--ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--Cce---EEeeeCC--CCc
Confidence 4799999998876655321111 01222222034 4545443221 1145788877432 111 1121111 001
Q ss_pred eeEEEEEEeCCCeEEEEEc-C-C---eEEEEECCCCcEEEE
Q 017755 298 YTEAFAFSKDGDKALIYQH-S-R---CLHWYNLKDHKQDVI 333 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~-~-~---~l~~ydl~t~~~~~v 333 (366)
...-..+.++|+.|++... . . .++.||+++++.+.+
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l 279 (388)
T 3pe7_A 239 SCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQL 279 (388)
T ss_dssp EEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE
T ss_pred ccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEE
Confidence 1233567889986655442 1 1 399999999998776
No 163
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=73.87 E-value=45 Score=29.06 Aligned_cols=68 Identities=16% Similarity=0.234 Sum_probs=39.3
Q ss_pred EEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCC-CC-CCcceeEEEEEEeCCCeEEEEEcC---CeEEEEECCCCcEE
Q 017755 257 WINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKM-LH-ETCYYTEAFAFSKDGDKALIYQHS---RCLHWYNLKDHKQD 331 (366)
Q Consensus 257 ~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~-~~~~~~~~~~~~~~g~~i~l~~~~---~~l~~ydl~t~~~~ 331 (366)
.++...... .+.+|-+... ..+..+... .. .......-+.+.++|..++....+ +.+.+||+++++..
T Consensus 199 ~l~~~~~dg-~i~i~d~~~~------~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 199 LIATGFNNG-TVQISELSTL------RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp EEEEECTTS-EEEEEETTTT------EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred eEEEEeCCC-cEEEEECCCC------ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 444443332 7999988741 123333320 00 000035567788889866666666 67999999988643
No 164
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=73.86 E-value=33 Score=29.33 Aligned_cols=70 Identities=14% Similarity=0.225 Sum_probs=45.0
Q ss_pred CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 254 GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 254 G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
|.+.+...... .+.||.++..+ ......+....- ...-+.+.++|+.++....++.+.+||+++++...+
T Consensus 54 g~~l~~~~~dg--~i~iw~~~~~~----~~~~~~~~~h~~----~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSWAN--DVRCWEVQDSG----QTIPKAQQMHTG----PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEETTS--EEEEEEECTTS----CEEEEEEEECSS----CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEEECCCC--cEEEEEcCCCC----ceeEEEeccccC----CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee
Confidence 46655555444 79999998522 222222221111 355577888998777777777899999999987664
No 165
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=73.77 E-value=44 Score=28.91 Aligned_cols=155 Identities=12% Similarity=0.056 Sum_probs=79.1
Q ss_pred eEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecC--CCCceeecCCCCceEE---CCeEEEEEeeCCCCCCc
Q 017755 145 DGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTR--EFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQ 219 (366)
Q Consensus 145 ~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~--~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~ 219 (366)
.++.+|+..+...+.- .....+++++..+..=+.+. .+. ...++.+ +|.|||......
T Consensus 82 ~glavd~~~g~ly~~d------~~~~~I~~~~~dG~~~~~l~~~~~~------~P~giavdp~~g~ly~td~~~~----- 144 (318)
T 3sov_A 82 DGLACDWLGEKLYWTD------SETNRIEVSNLDGSLRKVLFWQELD------QPRAIALDPSSGFMYWTDWGEV----- 144 (318)
T ss_dssp CEEEEETTTTEEEEEE------TTTTEEEEEETTSCSCEEEECSSCS------SEEEEEEEGGGTEEEEEECSSS-----
T ss_pred cEEEEEcCCCeEEEEE------CCCCEEEEEECCCCcEEEEEeCCCC------CccEEEEeCCCCEEEEEecCCC-----
Confidence 3677776544422221 23346677777654322221 111 1123444 589999875321
Q ss_pred ceEEEEECCCceeEEECCCCCCCCCeeeEEEEE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc
Q 017755 220 NMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY 297 (366)
Q Consensus 220 ~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 297 (366)
..|..+|+....-+.+-. .... .--.|+.. +|+||++..... .|+..+-.+. . ...+-...
T Consensus 145 ~~I~r~~~dG~~~~~~~~-~~l~--~Pnglavd~~~~~lY~aD~~~~----~I~~~d~dG~-~----~~~~~~~~----- 207 (318)
T 3sov_A 145 PKIERAGMDGSSRFIIIN-SEIY--WPNGLTLDYEEQKLYWADAKLN----FIHKSNLDGT-N----RQAVVKGS----- 207 (318)
T ss_dssp CEEEEEETTSCSCEEEEC-SSCS--CEEEEEEETTTTEEEEEETTTT----EEEEEETTSC-S----CEEEECSC-----
T ss_pred CEEEEEEcCCCCeEEEEE-CCCC--CccEEEEeccCCEEEEEECCCC----EEEEEcCCCC-c----eEEEecCC-----
Confidence 479999987543333311 1111 12234444 688998876433 5555553221 1 11111112
Q ss_pred eeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcE-EEE
Q 017755 298 YTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQ-DVI 333 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~-~~v 333 (366)
...|.++.-+++.+|+.... ..+..+|..+++. +.+
T Consensus 208 ~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 208 LPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp CSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 24455554455668887643 4699999987764 444
No 166
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=71.70 E-value=47 Score=28.34 Aligned_cols=197 Identities=13% Similarity=0.084 Sum_probs=93.7
Q ss_pred eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcE
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTW 182 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W 182 (366)
+++....++.+.|||..+++....-... ......+.+.|..+.+-+.+ ...-.+.+|+..++.-
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~~l~s~------~~dg~i~iwd~~~~~~ 150 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHYVGH----------GNAINELKFHPRDPNLLLSV------SKDHALRLWNIQTDTL 150 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEEESC----------CSCEEEEEECSSCTTEEEEE------ETTSCEEEEETTTTEE
T ss_pred EEEEecCCCEEEEEEchhceEeeeecCC----------CCcEEEEEECCCCCCEEEEE------eCCCeEEEEEeecCeE
Confidence 4444556778999999988765422111 11233566666434433332 1234578888877643
Q ss_pred Ee-cCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEE-EC--------------------CC
Q 017755 183 RR-TREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQ--------------------QP 238 (366)
Q Consensus 183 ~~-~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~--------------------~P 238 (366)
.. ......... ....+.+ +|.....+..+ ..|..+|+.+.+... +. .|
T Consensus 151 ~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (366)
T 3k26_A 151 VAIFGGVEGHRD--EVLSADYDLLGEKIMSCGMD------HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFP 222 (366)
T ss_dssp EEEECSTTSCSS--CEEEEEECTTSSEEEEEETT------SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCC
T ss_pred EEEecccccccC--ceeEEEECCCCCEEEEecCC------CCEEEEECCCCccccccceeEEecCCCCcccccceeeccC
Confidence 32 211010000 0011222 34444444433 378889988654211 00 00
Q ss_pred CC----CCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCC--------CCCeeEEEEecCCCCCCcceeEEEEEEe
Q 017755 239 HG----MKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGS--------QQSWSKLCSFSKMLHETCYYTEAFAFSK 306 (366)
Q Consensus 239 ~~----~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~--------~~~W~~~~~i~~~~~~~~~~~~~~~~~~ 306 (366)
.. .+......+.-. |.+.+...... .+.+|-+..... ......+..+....- ...-+++.+
T Consensus 223 ~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~ 295 (366)
T 3k26_A 223 DFSTRDIHRNYVDCVRWL-GDLILSKSCEN--AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQC----DIWYMRFSM 295 (366)
T ss_dssp SEEECSSCSSCCCEEEEE-TTEEEEECSSS--EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSC----CSSCCCCEE
T ss_pred ccccccCCcceEEEEEEc-CCEEEEEecCC--EEEEEeCCCccccccccccCCcchheeccccccCC----cEEEEEEcC
Confidence 00 011111222222 55444444333 799999875321 111222333322111 122245566
Q ss_pred C--CCeEEEEEcCCeEEEEECCCCcE
Q 017755 307 D--GDKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 307 ~--g~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
+ |..++....++.+.+||+++++.
T Consensus 296 ~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 296 DFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp CTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred CCCCcEEEEEecCCcEEEEECCCCCC
Confidence 6 88666666667799999998753
No 167
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=71.40 E-value=44 Score=27.93 Aligned_cols=194 Identities=10% Similarity=0.031 Sum_probs=93.1
Q ss_pred EEecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEe--c-------
Q 017755 96 VIGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQS--Y------- 165 (366)
Q Consensus 96 ~~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~--~------- 165 (366)
+.-+.+|.+.+.. ....+.++||.+++...+....... . ......+.+||.. . +.. ... .
T Consensus 74 l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~-~-----~~~~~~i~~d~~G-~--l~v-td~~~g~~~~~~~ 143 (296)
T 3e5z_A 74 HCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGK-K-----LNSPNDVCLAPDG-S--LWF-SDPTYGIDKPEEG 143 (296)
T ss_dssp EEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTE-E-----CCCCCCEEECTTS-C--EEE-EECSHHHHCGGGS
T ss_pred eeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCC-C-----CCCCCCEEECCCC-C--EEE-ECCcccccccccc
Confidence 4444567665554 3468999999999877664322111 0 1112245566643 2 221 110 0
Q ss_pred -----ccceeEEEEEEcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECC-Ccee----E
Q 017755 166 -----KVDYLEVIIYSLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLK-SEKF----Y 233 (366)
Q Consensus 166 -----~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~-~e~~----~ 233 (366)
......+..|+.. +.-+.+..-. ....++.+ +|.++ +..... ..|..||+. +.++ .
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-----~~~~gi~~s~dg~~l-v~~~~~-----~~i~~~~~~~~g~~~~~~~ 211 (296)
T 3e5z_A 144 YGGEMELPGRWVFRLAPD-GTLSAPIRDR-----VKPNGLAFLPSGNLL-VSDTGD-----NATHRYCLNARGETEYQGV 211 (296)
T ss_dssp SCCCCCSSSCEEEEECTT-SCEEEEECCC-----SSEEEEEECTTSCEE-EEETTT-----TEEEEEEECSSSCEEEEEE
T ss_pred ccccccCCCcEEEEECCC-CCEEEeecCC-----CCCccEEECCCCCEE-EEeCCC-----CeEEEEEECCCCcCcCCCe
Confidence 0011234444444 3333322100 00123433 57777 444332 378899986 4444 1
Q ss_pred EECCCCCCCCCeeeEEEE-ECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEE-EeCCCeE
Q 017755 234 EVQQPHGMKGGFCSQVGV-LRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAF-SKDGDKA 311 (366)
Q Consensus 234 ~i~~P~~~~~~~~~~l~~-~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~-~~~g~~i 311 (366)
.+...... -..+.. -+|.|++.. .. .+.+|-.+ ..-. ..+....- ..-+++ .++++.+
T Consensus 212 ~~~~~~~~----p~~i~~d~~G~l~v~~--~~--~v~~~~~~-----g~~~--~~~~~~~~-----~~~~~f~~~d~~~L 271 (296)
T 3e5z_A 212 HFTVEPGK----TDGLRVDAGGLIWASA--GD--GVHVLTPD-----GDEL--GRVLTPQT-----TSNLCFGGPEGRTL 271 (296)
T ss_dssp EECCSSSC----CCSEEEBTTSCEEEEE--TT--EEEEECTT-----SCEE--EEEECSSC-----CCEEEEESTTSCEE
T ss_pred EeeCCCCC----CCeEEECCCCCEEEEc--CC--eEEEECCC-----CCEE--EEEECCCC-----ceeEEEECCCCCEE
Confidence 22111111 112333 368888877 22 56665432 2222 23332221 112344 4677767
Q ss_pred EEEEcCCeEEEEECCCCcEEE
Q 017755 312 LIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 312 ~l~~~~~~l~~ydl~t~~~~~ 332 (366)
++...+ .++.+++++++++.
T Consensus 272 ~v~t~~-~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 272 YMTVST-EFWSIETNVRGLEH 291 (296)
T ss_dssp EEEETT-EEEEEECSCCBCCC
T ss_pred EEEcCC-eEEEEEcccccccc
Confidence 776654 59999999998764
No 168
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=71.39 E-value=75 Score=30.60 Aligned_cols=182 Identities=13% Similarity=0.108 Sum_probs=86.1
Q ss_pred cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEe-cCC
Q 017755 109 RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRR-TRE 187 (366)
Q Consensus 109 ~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~-~~~ 187 (366)
.++.+.|||...+....+......+ ......+.+.|....-.++... ....+.+|+..++.-.. +..
T Consensus 492 ~D~~i~iwd~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~l~s~s-----~d~~v~vwd~~~~~~~~~~~~ 559 (694)
T 3dm0_A 492 RDRTIKLWNTLGECKYTISEGGEGH-------RDWVSCVRFSPNTLQPTIVSAS-----WDKTVKVWNLSNCKLRSTLAG 559 (694)
T ss_dssp TTSCEEEECTTSCEEEEECSSTTSC-------SSCEEEEEECSCSSSCEEEEEE-----TTSCEEEEETTTCCEEEEECC
T ss_pred CCCEEEEEECCCCcceeeccCCCCC-------CCcEEEEEEeCCCCcceEEEEe-----CCCeEEEEECCCCcEEEEEcC
Confidence 4567788887665544443322221 1123345555554332333322 23357778877653321 111
Q ss_pred CCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCC
Q 017755 188 FPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHD 264 (366)
Q Consensus 188 ~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~ 264 (366)
-.... ..+.+ +|.+...+..+ ..|..+|+.+.+-.. .+.... ....+.-. +|.+... ....
T Consensus 560 h~~~v-----~~v~~spdg~~l~sg~~D------g~i~iwd~~~~~~~~-~~~~~~---~v~~~~~sp~~~~l~~-~~~~ 623 (694)
T 3dm0_A 560 HTGYV-----STVAVSPDGSLCASGGKD------GVVLLWDLAEGKKLY-SLEANS---VIHALCFSPNRYWLCA-ATEH 623 (694)
T ss_dssp CSSCE-----EEEEECTTSSEEEEEETT------SBCEEEETTTTEEEE-CCBCSS---CEEEEEECSSSSEEEE-EETT
T ss_pred CCCCE-----EEEEEeCCCCEEEEEeCC------CeEEEEECCCCceEE-EecCCC---cEEEEEEcCCCcEEEE-EcCC
Confidence 00000 11222 45554444444 378889998765322 222111 12223323 3443333 3333
Q ss_pred CCeEEEEEEeecCCCCCeeEEEEecCCCC--------------CCc-ceeEEEEEEeCCCeEEEEEcCCeEEEEECC
Q 017755 265 EPRCDIWVMKEYGSQQSWSKLCSFSKMLH--------------ETC-YYTEAFAFSKDGDKALIYQHSRCLHWYNLK 326 (366)
Q Consensus 265 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~--------------~~~-~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~ 326 (366)
.+.||-++.. ..+..+..... ... ..+.-+.++++|..++-...++.+.+||+.
T Consensus 624 --~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 624 --GIKIWDLESK------SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp --EEEEEETTTT------EEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred --CEEEEECCCC------CChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 6899987641 11222211100 000 024557788999977766777789999985
No 169
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=71.29 E-value=49 Score=28.43 Aligned_cols=182 Identities=11% Similarity=0.090 Sum_probs=90.1
Q ss_pred cceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCC
Q 017755 101 HGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKAD 180 (366)
Q Consensus 101 nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~ 180 (366)
+|.++....++.+.+||..+++....-... ......+.+.|.. . ++.... ..-.+.+|+.+++
T Consensus 154 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h----------~~~v~~~~~~~~~-~--~l~sg~----~d~~v~~wd~~~~ 216 (340)
T 1got_B 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGH----------TGDVMSLSLAPDT-R--LFVSGA----CDASAKLWDVREG 216 (340)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCC----------SSCEEEEEECTTS-S--EEEEEE----TTSCEEEEETTTC
T ss_pred CCcEEEEECCCcEEEEECCCCcEEEEEcCC----------CCceEEEEECCCC-C--EEEEEe----CCCcEEEEECCCC
Confidence 445444445678999999888765321111 1113345555532 2 222221 2335677777665
Q ss_pred cEEe-cCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCE
Q 017755 181 TWRR-TREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGC 255 (366)
Q Consensus 181 ~W~~-~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~ 255 (366)
.-.. ...-.... .++.+ +|.....+..+ ..|-.+|+.+.+-. .+..+.... ....+.-. +|+
T Consensus 217 ~~~~~~~~h~~~v-----~~v~~~p~~~~l~s~s~d------~~v~iwd~~~~~~~~~~~~~~~~~--~v~~~~~s~~g~ 283 (340)
T 1got_B 217 MCRQTFTGHESDI-----NAICFFPNGNAFATGSDD------ATCRLFDLRADQELMTYSHDNIIC--GITSVSFSKSGR 283 (340)
T ss_dssp SEEEEECCCSSCE-----EEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCTTCCS--CEEEEEECTTSS
T ss_pred eeEEEEcCCcCCE-----EEEEEcCCCCEEEEEcCC------CcEEEEECCCCcEEEEEccCCccc--ceEEEEECCCCC
Confidence 3221 11100000 12222 45554444444 37889999876542 233222211 11222222 466
Q ss_pred EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEE
Q 017755 256 LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYN 324 (366)
Q Consensus 256 L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 324 (366)
+.+...... .+.+|-+.. ...+..+....- ...-+++.++|..++-...++.+.+||
T Consensus 284 ~l~~g~~d~--~i~vwd~~~------~~~~~~~~~h~~----~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 284 LLLAGYDDF--NCNVWDALK------ADRAGVLAGHDN----RVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEETTS--EEEEEETTT------CCEEEEEECCSS----CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECCCC--eEEEEEccc------CcEeeEeecCCC----cEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 666665444 799998754 223333321111 345577888888565556666677765
No 170
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=70.82 E-value=57 Score=28.98 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=58.6
Q ss_pred CeEEEEEeeCCCCCCcceEEEEECCCcee-EEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCC
Q 017755 204 GALHWLAARGSVRTGQNMILAFDLKSEKF-YEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQS 281 (366)
Q Consensus 204 G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~ 281 (366)
|.+...+..+ ..|..+|+.+.+. ..+..|.+.. .-..+... +|.+.+...... .+.+|-+..
T Consensus 182 ~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~~~dg--~i~iwd~~~------ 245 (437)
T 3gre_A 182 KSLLVALTNL------SRVIIFDIRTLERLQIIENSPRHG--AVSSICIDEECCVLILGTTRG--IIDIWDIRF------ 245 (437)
T ss_dssp CEEEEEEETT------SEEEEEETTTCCEEEEEECCGGGC--CEEEEEECTTSCEEEEEETTS--CEEEEETTT------
T ss_pred CCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCCC--ceEEEEECCCCCEEEEEcCCC--eEEEEEcCC------
Confidence 5555555444 3899999987654 3345442221 12233322 466655555444 699998874
Q ss_pred eeEEEEecCCCCCCcceeEEEEEE----eCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 282 WSKLCSFSKMLHETCYYTEAFAFS----KDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 282 W~~~~~i~~~~~~~~~~~~~~~~~----~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
...+..+....- ....-+.+. ++|..++....++.+.+||+++++....
T Consensus 246 ~~~~~~~~~~~~---~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 246 NVLIRSWSFGDH---APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp TEEEEEEBCTTC---EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred ccEEEEEecCCC---CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 122333332211 012223222 3455344444555699999998886544
No 171
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=70.81 E-value=47 Score=27.97 Aligned_cols=100 Identities=12% Similarity=0.058 Sum_probs=53.1
Q ss_pred ceEEEEECCCceeE-EECCCC---CCCCCeeeEEEEE-CC-EEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCC
Q 017755 220 NMILAFDLKSEKFY-EVQQPH---GMKGGFCSQVGVL-RG-CLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLH 293 (366)
Q Consensus 220 ~~i~~fD~~~e~~~-~i~~P~---~~~~~~~~~l~~~-~G-~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 293 (366)
..|..+|+.+.+.. .+..+. ... .+... +| .|++...... .+.+|-++. .+ .+..+.....
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~s~dg~~l~v~~~~~~--~v~~~d~~~----~~--~~~~~~~~~~ 77 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPM-----VPMVAPGGRIAYATVNKSE--SLVKIDLVT----GE--TLGRIDLSTP 77 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCC-----CEEECTTSSEEEEEETTTT--EEEEEETTT----CC--EEEEEECCBT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCcc-----ceEEcCCCCEEEEEeCCCC--eEEEEECCC----CC--eEeeEEcCCc
Confidence 47899999887653 455554 221 12222 45 4555443222 666665543 11 2233332210
Q ss_pred CC-cceeEEEEEEeCCCeEEEEE------------cCCeEEEEECCCCcEEE
Q 017755 294 ET-CYYTEAFAFSKDGDKALIYQ------------HSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 294 ~~-~~~~~~~~~~~~g~~i~l~~------------~~~~l~~ydl~t~~~~~ 332 (366)
.. .....-+.+.++|+.+++.. .+..+.+||+++++...
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 129 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK 129 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE
Confidence 00 00122367788898777764 34569999999887643
No 172
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=70.63 E-value=44 Score=27.62 Aligned_cols=198 Identities=12% Similarity=0.073 Sum_probs=99.8
Q ss_pred EEEecccceEEeeec-CceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEE
Q 017755 95 SVIGCCHGLLAMFNR-RLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVI 173 (366)
Q Consensus 95 ~~~~s~nGLl~~~~~-~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 173 (366)
.+....+|-+.+.+. ...++++||. ++...++.+... ....++.+|+.. . +.. .. .....+.
T Consensus 66 ~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~---------~~~~~i~~~~~g-~--l~v-~~---~~~~~i~ 128 (300)
T 2qc5_A 66 CLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPD---------SGPYGITEGLNG-D--IWF-TQ---LNGDRIG 128 (300)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTT---------CCEEEEEECSTT-C--EEE-EE---TTTTEEE
T ss_pred eEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCC---------CCCccceECCCC-C--EEE-Ec---cCCCeEE
Confidence 344445666655543 5679999998 666544322111 123456666532 2 211 11 1123455
Q ss_pred EEEcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEE
Q 017755 174 IYSLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGV 251 (366)
Q Consensus 174 vyss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~ 251 (366)
.|+.. +...... .+.. .....++.+ +|.+|+..... ..|..||. +.++..+..|.... .-..+..
T Consensus 129 ~~~~~-g~~~~~~-~~~~--~~~~~~i~~d~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~--~~~~i~~ 195 (300)
T 2qc5_A 129 KLTAD-GTIYEYD-LPNK--GSYPAFITLGSDNALWFTENQN------NSIGRITN-TGKLEEYPLPTNAA--APVGITS 195 (300)
T ss_dssp EECTT-SCEEEEE-CSST--TCCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTC--CEEEEEE
T ss_pred EECCC-CCEEEcc-CCCC--CCCceeEEECCCCCEEEEecCC------CeEEEECC-CCcEEEeeCCCCCC--CcceEEE
Confidence 66665 4444321 1100 000113333 57866554333 37999999 66776666654432 1233444
Q ss_pred E-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCc
Q 017755 252 L-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHK 329 (366)
Q Consensus 252 ~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~ 329 (366)
. +|.|++...... .+ +.++. ....... .+.. .. ....-+++.++|. +++.... ..+..||+ +++
T Consensus 196 d~~g~l~v~~~~~~--~i--~~~~~---~g~~~~~-~~~~-~~---~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~ 261 (300)
T 2qc5_A 196 GNDGALWFVEIMGN--KI--GRITT---TGEISEY-DIPT-PN---ARPHAITAGKNSE-IWFTEWGANQIGRITN-DNT 261 (300)
T ss_dssp CTTSSEEEEETTTT--EE--EEECT---TCCEEEE-ECSS-TT---CCEEEEEECSTTC-EEEEETTTTEEEEECT-TSC
T ss_pred CCCCCEEEEccCCC--EE--EEEcC---CCcEEEE-ECCC-CC---CCceEEEECCCCC-EEEeccCCCeEEEECC-CCc
Confidence 3 588888765433 34 44443 1233322 1211 11 1234466677777 7777643 56999999 566
Q ss_pred EEEEEEe
Q 017755 330 QDVIEIR 336 (366)
Q Consensus 330 ~~~v~~~ 336 (366)
+..+.+.
T Consensus 262 ~~~~~~~ 268 (300)
T 2qc5_A 262 IQEYQLQ 268 (300)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 6655443
No 173
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=70.53 E-value=50 Score=28.18 Aligned_cols=138 Identities=17% Similarity=0.238 Sum_probs=69.8
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCC---CcEEecCC
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKA---DTWRRTRE 187 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~---~~W~~~~~ 187 (366)
..++++||.+++...+.... . ...++.+++..+ .+.+.. .....+.+|+..+ +..+....
T Consensus 165 g~v~~~d~~~~~~~~~~~~~-~----------~p~gia~~~dg~---~lyv~d---~~~~~I~~~~~~~~~~~~~~~~~~ 227 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKEL-H----------VPGGAEVSADSS---FVLVAE---FLSHQIVKYWLEGPKKGTAEVLVK 227 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEE-S----------CCCEEEECTTSS---EEEEEE---GGGTEEEEEESSSTTTTCEEEEEE
T ss_pred ceEEEEeCCCCEEEEeccCC-c----------cCcceEECCCCC---EEEEEe---CCCCeEEEEECCCCcCCccceEEe
Confidence 46788888877755432110 0 122455665422 122211 1234677777764 23433322
Q ss_pred CCceeecCCCCceEE--CCeEEEEEeeCC-CC----CCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEECCEEEEEE
Q 017755 188 FPYYILDDRCNGVFI--AGALHWLAARGS-VR----TGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVLRGCLWINS 260 (366)
Q Consensus 188 ~p~~~~~~~~~~v~~--~G~lyw~~~~~~-~~----~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~~G~L~~v~ 260 (366)
++- ..++.+ +|.+ |++.... .. .....|..||...+....+..|..........+..-+|.|++..
T Consensus 228 ~~g------P~gi~~d~~G~l-~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~ 300 (322)
T 2fp8_A 228 IPN------PGNIKRNADGHF-WVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGT 300 (322)
T ss_dssp CSS------EEEEEECTTSCE-EEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEEC
T ss_pred CCC------CCCeEECCCCCE-EEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEee
Confidence 211 123444 5775 5544320 00 00137999999888888888876532111223444689999886
Q ss_pred ecCCCCeEEEEEEe
Q 017755 261 YYHDEPRCDIWVMK 274 (366)
Q Consensus 261 ~~~~~~~l~iW~l~ 274 (366)
.... .+....++
T Consensus 301 ~~~~--~i~~~~~~ 312 (322)
T 2fp8_A 301 LFHG--SVGILVYD 312 (322)
T ss_dssp SSCS--EEEEEEC-
T ss_pred cCCC--ceEEEecc
Confidence 6443 55555554
No 174
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=70.48 E-value=44 Score=27.59 Aligned_cols=197 Identities=12% Similarity=0.071 Sum_probs=99.9
Q ss_pred eEEEecccceEEeeec-CceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEE
Q 017755 94 TSVIGCCHGLLAMFNR-RLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEV 172 (366)
Q Consensus 94 ~~~~~s~nGLl~~~~~-~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 172 (366)
..+....+|-+.+.+. ...+.++||. ++...++.+... ....++.+|+.. . +... . ...-.+
T Consensus 18 ~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~---------~~~~~i~~~~~g-~--l~v~-~---~~~~~i 80 (299)
T 2z2n_A 18 YGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPD---------AKVMCLTISSDG-E--VWFT-E---NAANKI 80 (299)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTT---------CCEEEEEECTTS-C--EEEE-E---TTTTEE
T ss_pred cceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCccc---------CceeeEEECCCC-C--EEEe-C---CCCCeE
Confidence 3444456676665543 5689999998 776655432111 123356666542 2 2111 1 112245
Q ss_pred EEEEcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEE
Q 017755 173 IIYSLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVG 250 (366)
Q Consensus 173 ~vyss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~ 250 (366)
..|+.. +..+... .|.. .....++.+ +|.+|...... ..|..+|+ +.+...+..|.... .-..+.
T Consensus 81 ~~~~~~-g~~~~~~-~~~~--~~~~~~i~~~~~g~l~v~~~~~------~~i~~~d~-~g~~~~~~~~~~~~--~~~~i~ 147 (299)
T 2z2n_A 81 GRITKK-GIIKEYT-LPNP--DSAPYGITEGPNGDIWFTEMNG------NRIGRITD-DGKIREYELPNKGS--YPSFIT 147 (299)
T ss_dssp EEECTT-SCEEEEE-CSST--TCCEEEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEECSSTTC--CEEEEE
T ss_pred EEECCC-CcEEEEe-CCCc--CCCceeeEECCCCCEEEEecCC------ceEEEECC-CCCEEEecCCCCCC--CCceEE
Confidence 555554 3444332 1100 001123433 47766554333 37999999 66676665554321 123444
Q ss_pred EE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEECCCC
Q 017755 251 VL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNLKDH 328 (366)
Q Consensus 251 ~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t~ 328 (366)
.. +|.|++...... .|+.++. . .+... ..+.. .. ....-+++.++|. +++... ...+..||+ ++
T Consensus 148 ~~~~g~l~v~~~~~~----~i~~~~~-~--g~~~~-~~~~~-~~---~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 148 LGSDNALWFTENQNN----AIGRITE-S--GDITE-FKIPT-PA---SGPVGITKGNDDA-LWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp ECTTSCEEEEETTTT----EEEEECT-T--CCEEE-EECSS-TT---CCEEEEEECTTSS-EEEEETTTTEEEEECT-TC
T ss_pred EcCCCCEEEEeCCCC----EEEEEcC-C--CcEEE-eeCCC-CC---CcceeEEECCCCC-EEEEccCCceEEEECC-CC
Confidence 44 578887664322 3444443 1 22332 11111 11 1233456667777 777664 456999999 88
Q ss_pred cEEEEE
Q 017755 329 KQDVIE 334 (366)
Q Consensus 329 ~~~~v~ 334 (366)
+++.+.
T Consensus 214 ~~~~~~ 219 (299)
T 2z2n_A 214 EITEFK 219 (299)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 776653
No 175
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=69.63 E-value=81 Score=30.26 Aligned_cols=192 Identities=10% Similarity=0.010 Sum_probs=96.9
Q ss_pred EecccceEEeeec-CceEEEEcCCCcce--EecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEE
Q 017755 97 IGCCHGLLAMFNR-RLGMSVFNPTTKKF--KLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVI 173 (366)
Q Consensus 97 ~~s~nGLl~~~~~-~~~~~V~NP~t~~~--~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 173 (366)
.+..+|.|..++. ...+..+++..... ..+.. . .....++++|+..+.-.+.- ...-.++
T Consensus 47 ~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~-~----------~~~P~GlAvD~~~~~ly~~d------~~~~~I~ 109 (619)
T 3s94_A 47 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-G----------LLSPDGLACDWLGEKLYWTD------SETNRIE 109 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC-----CEEEECS-S----------CSCEEEEEEETTTTEEEEEE------TTTTEEE
T ss_pred EEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeC-C----------CCCcCeEEEEecCCEEEEEe------CCCCEEE
Confidence 3456788877753 55677777765521 22222 1 11345788887655432221 2345677
Q ss_pred EEEcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEE
Q 017755 174 IYSLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVG 250 (366)
Q Consensus 174 vyss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~ 250 (366)
++++.+..=+.+.. .. .....++.+ +|.|||...... ..|..+++....-..+-.. ... .-..|+
T Consensus 110 v~~~dG~~~~~l~~--~~--l~~P~~Iavdp~~g~ly~tD~g~~-----~~I~r~~~dG~~~~~l~~~-~~~--~P~Gla 177 (619)
T 3s94_A 110 VSNLDGSLRKVLFW--QE--LDQPRAIALDPSSGFMYWTDWGEV-----PKIERAGMDGSSRFIIINS-EIY--WPNGLT 177 (619)
T ss_dssp EEETTSCSCEEEEC--SS--CSCCCCEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEEEECS-SCS--SEEEEE
T ss_pred EEECCCCCEEEEEe--CC--CCCCceEEEecCCCeEEEeccCCC-----CEEEEEECCCCceEEEEeC-CCC--CCcEEE
Confidence 77776543222211 00 111135655 689999875422 3788999876544433111 111 122344
Q ss_pred EE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCC
Q 017755 251 VL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKD 327 (366)
Q Consensus 251 ~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t 327 (366)
.. +++||++..... .||..+-.+. .... +.... ...|.++.-+++.+|+.... ..+...|..+
T Consensus 178 ld~~~~~LY~aD~~~~----~I~~~~~dG~-~~~~----~~~~~-----~~~P~gi~~~~~~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 178 LDYEEQKLYWADAKLN----FIHKSNLDGT-NRQA----VVKGS-----LPHPFALTLFEDILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp EETTTTEEEEEETTTC----CEEEESSSCC-EEC------------------CCCEEESSSEEEEECTTTCSEEEEESSS
T ss_pred EEccCCEEEEEeCCCC----eEEEecCCCC-ccEE----EEeCC-----CCCceEEEEeCCEEEEecCCCCEEEEEECCC
Confidence 44 689999876432 5777765331 1111 11111 13444554455568877643 3499999988
Q ss_pred CcEE
Q 017755 328 HKQD 331 (366)
Q Consensus 328 ~~~~ 331 (366)
++-.
T Consensus 244 g~~~ 247 (619)
T 3s94_A 244 GEGL 247 (619)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 7643
No 176
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=69.26 E-value=47 Score=27.38 Aligned_cols=161 Identities=10% Similarity=0.080 Sum_probs=82.1
Q ss_pred EeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcc
Q 017755 144 FDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQN 220 (366)
Q Consensus 144 ~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~ 220 (366)
..++.+|+..+...+.- ...-.+.+|+..++.-+.+.... . ....++.+ +|.+||..... .
T Consensus 38 ~~gi~~d~~~~~ly~~d------~~~~~I~~~~~~g~~~~~~~~~~--~--~~p~~ia~d~~~~~lyv~d~~~------~ 101 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTD------ISEPSIGRASLHGGEPTTIIRQD--L--GSPEGIALDHLGRTIFWTDSQL------D 101 (267)
T ss_dssp EEEEEEETTTTEEEEEE------TTTTEEEEEESSSCCCEEEECTT--C--CCEEEEEEETTTTEEEEEETTT------T
T ss_pred EEEEEEecCCCEEEEEE------CCCCEEEEEecCCCCcEEEEECC--C--CCccEEEEEecCCeEEEEECCC------C
Confidence 45677787544322221 12345677777654322221100 0 01123444 57899987654 4
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEEEEE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcce
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYY 298 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 298 (366)
.|..+|+....-..+ .+.... .-..++.. +|.|++....... -.|++.+..+. -.+. +....+ ..
T Consensus 102 ~I~~~~~~g~~~~~~-~~~~~~--~P~~i~vd~~~g~lyv~~~~~~~--~~I~~~~~dg~---~~~~--~~~~~~---~~ 168 (267)
T 1npe_A 102 RIEVAKMDGTQRRVL-FDTGLV--NPRGIVTDPVRGNLYWTDWNRDN--PKIETSHMDGT---NRRI--LAQDNL---GL 168 (267)
T ss_dssp EEEEEETTSCSCEEE-ECSSCS--SEEEEEEETTTTEEEEEECCSSS--CEEEEEETTSC---CCEE--EECTTC---SC
T ss_pred EEEEEEcCCCCEEEE-EECCCC--CccEEEEeeCCCEEEEEECCCCC--cEEEEEecCCC---CcEE--EEECCC---CC
Confidence 799999976543333 121211 12234444 5889888754222 23444442221 1111 111111 13
Q ss_pred eEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcEEEE
Q 017755 299 TEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~~~v 333 (366)
..-+++.++++.+|+.... ..+..+|++++..+.+
T Consensus 169 P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 4557777777778887654 4699999987655444
No 177
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=68.75 E-value=58 Score=28.27 Aligned_cols=155 Identities=7% Similarity=0.001 Sum_probs=81.2
Q ss_pred eEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcce
Q 017755 145 DGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNM 221 (366)
Q Consensus 145 ~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~ 221 (366)
..+.+.|...++-+.+ . ..-.+.+|+..++............ ..-..+.+ +|.+...+..+ ..
T Consensus 77 ~~~~~~~~~~~~l~s~--~----~dg~i~iwd~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~d------~~ 142 (383)
T 3ei3_B 77 TSLEWHPTHPTTVAVG--S----KGGDIILWDYDVQNKTSFIQGMGPG--DAITGMKFNQFNTNQLFVSSIR------GA 142 (383)
T ss_dssp EEEEECSSCTTEEEEE--E----BTSCEEEEETTSTTCEEEECCCSTT--CBEEEEEEETTEEEEEEEEETT------TE
T ss_pred EEEEECCCCCCEEEEE--c----CCCeEEEEeCCCcccceeeecCCcC--CceeEEEeCCCCCCEEEEEeCC------CE
Confidence 3456666543433332 1 2345788888876654432110000 00012222 33444444333 37
Q ss_pred EEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeE
Q 017755 222 ILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTE 300 (366)
Q Consensus 222 i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~ 300 (366)
|..+|+.++....+........ ....+... +|+..+...... .+.+|-++. . .+..+....- ...
T Consensus 143 i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~--~i~i~d~~~----~---~~~~~~~h~~----~v~ 208 (383)
T 3ei3_B 143 TTLRDFSGSVIQVFAKTDSWDY-WYCCVDVSVSRQMLATGDSTG--RLLLLGLDG----H---EIFKEKLHKA----KVT 208 (383)
T ss_dssp EEEEETTSCEEEEEECCCCSSC-CEEEEEEETTTTEEEEEETTS--EEEEEETTS----C---EEEEEECSSS----CEE
T ss_pred EEEEECCCCceEEEeccCCCCC-CeEEEEECCCCCEEEEECCCC--CEEEEECCC----C---EEEEeccCCC----cEE
Confidence 9999999887777755443222 12233333 456555544433 799998842 1 2222221111 355
Q ss_pred EEEEEeCCC-eEEEEEcCCeEEEEECCC
Q 017755 301 AFAFSKDGD-KALIYQHSRCLHWYNLKD 327 (366)
Q Consensus 301 ~~~~~~~g~-~i~l~~~~~~l~~ydl~t 327 (366)
-+.+.+++. .++....++.+.+||+++
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred EEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 577788887 566666677799999987
No 178
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=68.32 E-value=79 Score=29.59 Aligned_cols=187 Identities=7% Similarity=0.010 Sum_probs=95.8
Q ss_pred ccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCC
Q 017755 100 CHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKA 179 (366)
Q Consensus 100 ~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~ 179 (366)
.+++++.........+||..|++...+...+ . ..+.++|. +++ ++...........+.+++..+
T Consensus 121 g~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~----------~---~~~~~spD-G~~--la~~~~~~~~~~~i~~~d~~~ 184 (582)
T 3o4h_A 121 GEAVVFTGATEDRVALYALDGGGLRELARLP----------G---FGFVSDIR-GDL--IAGLGFFGGGRVSLFTSNLSS 184 (582)
T ss_dssp SSCEEEEEECSSCEEEEEEETTEEEEEEEES----------S---CEEEEEEE-TTE--EEEEEEEETTEEEEEEEETTT
T ss_pred CCeEEEEecCCCCceEEEccCCcEEEeecCC----------C---ceEEECCC-CCE--EEEEEEcCCCCeEEEEEcCCC
Confidence 3456666655566679999999877765332 1 12344443 222 222222212335588888888
Q ss_pred CcEEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCe---ee-EE-EEECC
Q 017755 180 DTWRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGF---CS-QV-GVLRG 254 (366)
Q Consensus 180 ~~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~---~~-~l-~~~~G 254 (366)
+.++.+..-+.... .....-+|+..+....+. ...|..+|+.+.+...+.......... .. .. ..-+|
T Consensus 185 g~~~~l~~~~~~~~---~~~~SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 257 (582)
T 3o4h_A 185 GGLRVFDSGEGSFS---SASISPGMKVTAGLETAR----EARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG 257 (582)
T ss_dssp CCCEEECCSSCEEE---EEEECTTSCEEEEEECSS----CEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS
T ss_pred CCceEeecCCCccc---cceECCCCCEEEEccCCC----eeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCC
Confidence 88887754322111 011233676555332221 147999999988777222211110000 00 00 12257
Q ss_pred EEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCC---eEEEEECCC
Q 017755 255 CLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSR---CLHWYNLKD 327 (366)
Q Consensus 255 ~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~---~l~~ydl~t 327 (366)
++++...... ...||.+ +. ..+ . ..+ ....+.+. +|..++....+. .++.+|+++
T Consensus 258 ~~~~~~~~~g--~~~l~~~---g~---~~~----~---~~~--~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 258 RLAVVARREG--RSAVFID---GE---RVE----A---PQG--NHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp CEEEEEEETT--EEEEEET---TE---EEC----C---CSS--EEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred cEEEEEEcCC--cEEEEEE---CC---eec----c---CCC--ceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 6666655544 7999988 21 111 1 111 23445666 777555444432 488888765
No 179
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=67.85 E-value=9.1 Score=27.86 Aligned_cols=44 Identities=9% Similarity=0.132 Sum_probs=31.0
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEE
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQ 163 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~ 163 (366)
-+++++||.+++|. |...... ..+...+..|+..+.|+|+....
T Consensus 11 A~V~~~d~~~~~W~--p~~~g~~-------gvs~V~~~~d~~~~~yrI~~~~l 54 (115)
T 1egx_A 11 ATVMLYDDGNKRWL--PAGTGPQ-------AFSRVQIYHNPTANSFRVVGRKM 54 (115)
T ss_dssp EECBEECTTTSSCC--BSSCSCC-------CCEEEEEEEETTTTEEEEEEEES
T ss_pred EEEEEEcCCCCcee--ECCCCCC-------CccEEEEEEeCCCCEEEEEEEEc
Confidence 36788999999974 4443211 33456788898888999998753
No 180
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=67.52 E-value=37 Score=32.23 Aligned_cols=119 Identities=10% Similarity=0.051 Sum_probs=62.5
Q ss_pred CceEECCeEEEEEeeCCCCCCcceEEEEEC-CC--ceeEEECCCCCC-------CCCeeeEEEEECCEEEEEEecCCCCe
Q 017755 198 NGVFIAGALHWLAARGSVRTGQNMILAFDL-KS--EKFYEVQQPHGM-------KGGFCSQVGVLRGCLWINSYYHDEPR 267 (366)
Q Consensus 198 ~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~-~~--e~~~~i~~P~~~-------~~~~~~~l~~~~G~L~~v~~~~~~~~ 267 (366)
.+++.+|.+|...... ..+.++|. .+ +.|+. +++... .+.....++..+|++++....
T Consensus 57 ~P~v~~g~vyv~~~~~------~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----- 124 (571)
T 2ad6_A 57 APLVIGDMMYVHSAFP------NNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN----- 124 (571)
T ss_dssp CCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-----
T ss_pred ccEEECCEEEEEeCCC------CEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeCC-----
Confidence 4788999999877622 27999998 65 45654 222210 001122345567777766432
Q ss_pred EEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEEEE
Q 017755 268 CDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 268 l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~~v 333 (366)
=.+..++-...+..|... +............|+.. + +.|++... +..++.||.+|++...-
T Consensus 125 g~l~alD~~tG~~~W~~~--~~~~~~~~~~~~~P~v~--~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVE--VCDPKVGSTLTQAPFVA--K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp SEEEEEETTTCCEEEEEE--CCCGGGTCBCCSCCEEE--T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCCEEEEec--CCCCCccceeccCCEEE--C-CEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 134445532234556532 11100000001233321 3 44776654 45699999999986543
No 181
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=66.07 E-value=62 Score=27.60 Aligned_cols=89 Identities=11% Similarity=0.234 Sum_probs=50.4
Q ss_pred eEEEEECCCceeEE-ECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcce
Q 017755 221 MILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYY 298 (366)
Q Consensus 221 ~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 298 (366)
.|..+|+.+.+... +..... ....+.-. +|+..+...... .+.||-++. ...+..+....- .
T Consensus 229 ~i~iwd~~~~~~~~~~~~h~~----~v~~~~~sp~~~~l~s~s~D~--~v~iwd~~~------~~~~~~~~~h~~----~ 292 (321)
T 3ow8_A 229 YIKIYDVQHANLAGTLSGHAS----WVLNVAFCPDDTHFVSSSSDK--SVKVWDVGT------RTCVHTFFDHQD----Q 292 (321)
T ss_dssp CEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSEEEEEETTS--CEEEEETTT------TEEEEEECCCSS----C
T ss_pred eEEEEECCCcceeEEEcCCCC----ceEEEEECCCCCEEEEEeCCC--cEEEEeCCC------CEEEEEEcCCCC----c
Confidence 68899998765533 222111 12233333 455544444333 799998763 233444432111 3
Q ss_pred eEEEEEEeCCCeEEEEEcCCeEEEEEC
Q 017755 299 TEAFAFSKDGDKALIYQHSRCLHWYNL 325 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~~~l~~ydl 325 (366)
..-+.+.++|..++-...++.+.+||.
T Consensus 293 v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 293 VWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 455777888886666666667888885
No 182
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=65.66 E-value=62 Score=28.77 Aligned_cols=90 Identities=11% Similarity=0.160 Sum_probs=52.9
Q ss_pred eeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCC
Q 017755 231 KFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGD 309 (366)
Q Consensus 231 ~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~ 309 (366)
.++.++.|.-.++ +...+... .+.+..+.. .. .+.||-.+. .+-.++.......- ...-+++.++|+
T Consensus 93 p~~~l~ap~~~~d-~y~~~l~wS~~n~lAvgl-d~--tV~lWd~~t----g~~~~~~~~~~~~~----~V~sv~fspdg~ 160 (420)
T 4gga_A 93 PDRILDAPEIRND-YYLNLVDWSSGNVLAVAL-DN--SVYLWSASS----GDILQLLQMEQPGE----YISSVAWIKEGN 160 (420)
T ss_dssp CSEEEECTTCCCC-TTCBCEEECTTSEEEEEE-TT--EEEEEETTT----CCEEEEEECCSTTC----CEEEEEECTTSS
T ss_pred CceEEECCCCccc-ccceeEEECCCCEEEEEe-CC--EEEEEECCC----CCEEEEEEecCCCC----cEEEEEECCCCC
Confidence 3455677766654 33344444 233333333 23 799997663 23333433322111 356688889999
Q ss_pred eEEEEEcCCeEEEEECCCCcEEE
Q 017755 310 KALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 310 ~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
.++....++.+.+||+++++...
T Consensus 161 ~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 161 YLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp EEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEECCCeEEEEEcCCCcEEE
Confidence 77777777789999999987543
No 183
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=65.54 E-value=76 Score=28.42 Aligned_cols=195 Identities=9% Similarity=0.057 Sum_probs=95.9
Q ss_pred cccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 99 CCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 99 s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
+.+|+++....++.+.+||..+++....-.... .....+.+.+..+.-.++... ....+.+|+..
T Consensus 171 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~----------~~v~~l~~~~~~~~~~l~s~s-----~d~~i~vwd~~ 235 (464)
T 3v7d_B 171 AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHN----------STVRCLDIVEYKNIKYIVTGS-----RDNTLHVWKLP 235 (464)
T ss_dssp CSTTEEEEEETTSCEEEEETTTTEEEEEECCCS----------SCEEEEEEEESSSCEEEEEEE-----TTSCEEEEECC
T ss_pred cCCCEEEEEeCCCCEEEEECCCCcEEEEECCCC----------CccEEEEEecCCCCCEEEEEc-----CCCcEEEeeCC
Confidence 446666666678899999999987654322111 112233444332322333322 23345666766
Q ss_pred CCcEEecC----CCC----------cee--e-cCC--CCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCC
Q 017755 179 ADTWRRTR----EFP----------YYI--L-DDR--CNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQP 238 (366)
Q Consensus 179 ~~~W~~~~----~~p----------~~~--~-~~~--~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P 238 (366)
++.-.... ..+ ... . ... ...+..+|.....+..+ ..|..+|+.+.+... +...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD------NTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp CCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT------SCEEEEETTTTEEEEEECCC
T ss_pred CCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC------CeEEEEECCCCcEEEEecCC
Confidence 54321100 000 000 0 000 01234455555555444 379999998766533 3322
Q ss_pred CCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC
Q 017755 239 HGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS 317 (366)
Q Consensus 239 ~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~ 317 (366)
.. ....+... +|...+...... .+.+|-++. ...+..+....- ...-+.+ +++.++....+
T Consensus 310 ~~----~v~~~~~~~~~~~l~sg~~dg--~i~vwd~~~------~~~~~~~~~h~~----~v~~~~~--~~~~l~s~s~d 371 (464)
T 3v7d_B 310 TD----RIYSTIYDHERKRCISASMDT--TIRIWDLEN------GELMYTLQGHTA----LVGLLRL--SDKFLVSAAAD 371 (464)
T ss_dssp SS----CEEEEEEETTTTEEEEEETTS--CEEEEETTT------TEEEEEECCCSS----CEEEEEE--CSSEEEEEETT
T ss_pred CC----CEEEEEEcCCCCEEEEEeCCC--cEEEEECCC------CcEEEEEeCCCC----cEEEEEE--cCCEEEEEeCC
Confidence 21 12233333 455555555444 699998764 123444432111 1222333 46656666677
Q ss_pred CeEEEEECCCCcEEE
Q 017755 318 RCLHWYNLKDHKQDV 332 (366)
Q Consensus 318 ~~l~~ydl~t~~~~~ 332 (366)
+.+.+||+++++...
T Consensus 372 g~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 372 GSIRGWDANDYSRKF 386 (464)
T ss_dssp SEEEEEETTTCCEEE
T ss_pred CcEEEEECCCCceee
Confidence 789999999876443
No 184
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=65.52 E-value=3.1 Score=24.39 Aligned_cols=18 Identities=33% Similarity=0.481 Sum_probs=14.1
Q ss_pred CCCcHHHHHHHHccCCcc
Q 017755 2 SSLPLDLISDILSRLPVK 19 (366)
Q Consensus 2 ~~LP~Dll~~Il~rLP~~ 19 (366)
..||.||++|||+.-...
T Consensus 22 ~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 22 KQLPADIQEEILSGKSRE 39 (48)
T ss_dssp TTSCHHHHHHHTTCCCSC
T ss_pred HHCcHHHHHHHHhcchHH
Confidence 479999999999865543
No 185
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=65.46 E-value=65 Score=27.60 Aligned_cols=97 Identities=15% Similarity=0.042 Sum_probs=51.9
Q ss_pred eEEEEECCCce-eEEECCCCCCCCCeeeEEEEE---CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCc
Q 017755 221 MILAFDLKSEK-FYEVQQPHGMKGGFCSQVGVL---RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETC 296 (366)
Q Consensus 221 ~i~~fD~~~e~-~~~i~~P~~~~~~~~~~l~~~---~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 296 (366)
.+..+|..+.+ ...+..+... .-..+... +|.+.+...... .+.+|-++.. . -..........
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~s~s~dg--~i~~wd~~~~---~-~~~~~~~~~~~---- 171 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSAN---EIIYMYGHNEVNTEYFIWADNRG--TIGFQSYEDD---S-QYIVHSAKSDV---- 171 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCSS---CEEEEECCC---CCEEEEEETTC--CEEEEESSSS---C-EEEEECCCSSC----
T ss_pred ceEEeecCCcceeEEeecCCCC---CEEEEEcCCCCCCCEEEEEeCCC--cEEEEECCCC---c-EEEEEecCCCC----
Confidence 45666766655 4444433321 11122211 355555444444 6999998752 1 12222111111
Q ss_pred ceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEE
Q 017755 297 YYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 297 ~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
...-+.+.++|..+.....++.+.+||+++++..
T Consensus 172 -~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 172 -EYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp -CCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred -ceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 2444778889885555566777999999998864
No 186
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=65.37 E-value=64 Score=27.48 Aligned_cols=206 Identities=8% Similarity=0.027 Sum_probs=96.5
Q ss_pred EEeeecCceEEEEcCCCcceEecCCCCCCCc---cCC------CCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEE
Q 017755 104 LAMFNRRLGMSVFNPTTKKFKLFPQFWSDCY---TDY------MTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVII 174 (366)
Q Consensus 104 l~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~---~~~------~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~v 174 (366)
+.+......++.+||.+++...+.......- ... ........++.+|+..+..-|. . ....+.+
T Consensus 33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~---d----~~~~i~~ 105 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV---D----CYYHLSV 105 (322)
T ss_dssp EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE---E----TTTEEEE
T ss_pred EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE---E----CCCCEEE
Confidence 4444445678888998877654432110000 000 0000124567777633332221 1 1122556
Q ss_pred EEcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCC-----------CCCcceEEEEECCCceeEEE----C
Q 017755 175 YSLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSV-----------RTGQNMILAFDLKSEKFYEV----Q 236 (366)
Q Consensus 175 yss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~-----------~~~~~~i~~fD~~~e~~~~i----~ 236 (366)
|+..++..+.+..............+.+ +|.+|+....... ......|..||..+.+...+ .
T Consensus 106 ~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~ 185 (322)
T 2fp8_A 106 VGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH 185 (322)
T ss_dssp ECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES
T ss_pred EeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc
Confidence 6666555544432111111111123444 5777776533100 00114799999987776543 3
Q ss_pred CCCCCCCCeeeEEEEE-CCE-EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEE
Q 017755 237 QPHGMKGGFCSQVGVL-RGC-LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIY 314 (366)
Q Consensus 237 ~P~~~~~~~~~~l~~~-~G~-L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~ 314 (366)
.|.. ++.. +|+ |++...... .+.++.++.. .......... +++ ..-+++.++|. +++.
T Consensus 186 ~p~g--------ia~~~dg~~lyv~d~~~~--~I~~~~~~~~-~~~~~~~~~~-----~~g---P~gi~~d~~G~-l~va 245 (322)
T 2fp8_A 186 VPGG--------AEVSADSSFVLVAEFLSH--QIVKYWLEGP-KKGTAEVLVK-----IPN---PGNIKRNADGH-FWVS 245 (322)
T ss_dssp CCCE--------EEECTTSSEEEEEEGGGT--EEEEEESSST-TTTCEEEEEE-----CSS---EEEEEECTTSC-EEEE
T ss_pred cCcc--------eEECCCCCEEEEEeCCCC--eEEEEECCCC-cCCccceEEe-----CCC---CCCeEECCCCC-EEEE
Confidence 3332 3333 354 666655433 3444333321 1123332222 111 22256667787 7776
Q ss_pred EcC-----------CeEEEEECCCCcEEEEEEe
Q 017755 315 QHS-----------RCLHWYNLKDHKQDVIEIR 336 (366)
Q Consensus 315 ~~~-----------~~l~~ydl~t~~~~~v~~~ 336 (366)
... ..+..||++.+..+.+...
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 246 SSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp EEEETTSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred ecCcccccccCCCccEEEEECCCCCEEEEEECC
Confidence 543 3599999987666766554
No 187
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=65.35 E-value=9.4 Score=28.31 Aligned_cols=43 Identities=0% Similarity=-0.310 Sum_probs=26.6
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEee---cCCCCCeeEEEEE
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGY---DASTDDYKLVRII 162 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~---d~~~~~ykVv~~~ 162 (366)
-+++++||.+++|...-.. .. ......+.. |...+.|+|+...
T Consensus 20 A~Vm~~D~~~~~W~p~~~g--~l-------s~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 20 AVVMTRDDSSGGWFPQEGG--GI-------SRVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEEECTTSSSSEECSCC--SC-------EEEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEEeeEcCCCCCEeeCCCC--Cc-------ccEEEEEecCCCCCCCCEEEEEEEE
Confidence 3688999999998665432 11 112223333 4556789999875
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=65.20 E-value=71 Score=27.94 Aligned_cols=72 Identities=11% Similarity=0.270 Sum_probs=45.4
Q ss_pred CCEEEEEEe-cCC-----CCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECC
Q 017755 253 RGCLWINSY-YHD-----EPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLK 326 (366)
Q Consensus 253 ~G~L~~v~~-~~~-----~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~ 326 (366)
+++|++... ... ...-.||+.+- .+...+.++.... ..-+++.++|+.++.... ..+.+||.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~----~t~~~v~~i~~~~------p~~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDT----KTKQRVARIPGRD------ALSMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEET----TTTEEEEEEECTT------CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEEC----CCCcEEEEEecCC------eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence 367777654 111 01246676663 2345666666544 233788899996666554 669999999
Q ss_pred CCcEEEEEE
Q 017755 327 DHKQDVIEI 335 (366)
Q Consensus 327 t~~~~~v~~ 335 (366)
|++++.+..
T Consensus 334 t~~l~~~~~ 342 (361)
T 2oiz_A 334 QPEPKLLRT 342 (361)
T ss_dssp SSSCEEEEE
T ss_pred CCcceeeEE
Confidence 997777753
No 189
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=64.97 E-value=40 Score=28.55 Aligned_cols=110 Identities=9% Similarity=0.012 Sum_probs=58.2
Q ss_pred CCe-EEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCC
Q 017755 203 AGA-LHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQ 280 (366)
Q Consensus 203 ~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~ 280 (366)
+|. +||..... ..|..+|.. .+.+.+..|... ...+... +|+|++...... .+.+|..+ .
T Consensus 55 ~g~~l~~~d~~~------~~i~~~~~~-g~~~~~~~~~~~----~~gl~~d~dG~l~v~~~~~~--~v~~~~~~-----g 116 (305)
T 3dr2_A 55 AQRTLVWSDLVG------RRVLGWRED-GTVDVLLDATAF----TNGNAVDAQQRLVHCEHGRR--AITRSDAD-----G 116 (305)
T ss_dssp GGTEEEEEETTT------TEEEEEETT-SCEEEEEESCSC----EEEEEECTTSCEEEEETTTT--EEEEECTT-----S
T ss_pred CCCEEEEEECCC------CEEEEEeCC-CCEEEEeCCCCc----cceeeECCCCCEEEEECCCC--EEEEECCC-----C
Confidence 454 89987654 378889984 445555444332 2233333 588776654322 34444322 2
Q ss_pred CeeEEEE-ecCCCCCCcceeEEEEEEeCCCeEEEEE------------------cCCeEEEEECCCCcEEEEE
Q 017755 281 SWSKLCS-FSKMLHETCYYTEAFAFSKDGDKALIYQ------------------HSRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 281 ~W~~~~~-i~~~~~~~~~~~~~~~~~~~g~~i~l~~------------------~~~~l~~ydl~t~~~~~v~ 334 (366)
+...+.. ...... ....-+.+.++|. +++.. ....++.||+++++++.+.
T Consensus 117 ~~~~~~~~~~~~~~---~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 117 QAHLLVGRYAGKRL---NSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp CEEEEECEETTEEC---SCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CEEEEEeccCCCcc---CCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 2332221 111000 0123367777887 77631 0235999999999887764
No 190
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=64.87 E-value=63 Score=27.24 Aligned_cols=200 Identities=8% Similarity=0.006 Sum_probs=92.9
Q ss_pred eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcE
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTW 182 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W 182 (366)
|+......+.++.++| +++...+.... ....++.+|+..+ ++... .....+..|+.. ++.
T Consensus 59 l~~~d~~~~~i~~~~~-~g~~~~~~~~~-----------~~~~gl~~d~dG~---l~v~~----~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGTVDVLLDAT-----------AFTNGNAVDAQQR---LVHCE----HGRRAITRSDAD-GQA 118 (305)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEEEESC-----------SCEEEEEECTTSC---EEEEE----TTTTEEEEECTT-SCE
T ss_pred EEEEECCCCEEEEEeC-CCCEEEEeCCC-----------CccceeeECCCCC---EEEEE----CCCCEEEEECCC-CCE
Confidence 4444334667888898 56544432221 1234667776432 22221 122355666664 555
Q ss_pred EecCCCCceeecCCCCceEE--CCeEEEEEe----eC-------CCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEE
Q 017755 183 RRTREFPYYILDDRCNGVFI--AGALHWLAA----RG-------SVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQV 249 (366)
Q Consensus 183 ~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~----~~-------~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l 249 (366)
+.+..............+.+ +|.+|+... .. ........|..+|+.+.+++.+. ... .-..+
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~----~p~gl 193 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD----HPNGL 193 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES----SEEEE
T ss_pred EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCC----CCcce
Confidence 54432111111111112332 677776421 00 00001247999999888776653 111 11123
Q ss_pred EEE-CCE-EEEEEecCC---CCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEE
Q 017755 250 GVL-RGC-LWINSYYHD---EPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYN 324 (366)
Q Consensus 250 ~~~-~G~-L~~v~~~~~---~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~yd 324 (366)
+.. +|+ |++...... ...+.+|.++. . . ......+.... .+ ...-+.+.++|. +++... ..+..||
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~--~-~-l~~~~~~~~~~-~~--~pdgi~~d~~G~-lwv~~~-~gv~~~~ 264 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRD--G-A-LHDRRHFASVP-DG--LPDGFCVDRGGW-LWSSSG-TGVCVFD 264 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEET--T-E-EEEEEEEECCS-SS--CCCSEEECTTSC-EEECCS-SEEEEEC
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecC--C-C-ccCCeEEEECC-CC--CCCeEEECCCCC-EEEecC-CcEEEEC
Confidence 333 454 666655320 12444444432 1 1 22222111110 00 112256777888 777664 4599999
Q ss_pred CCCCcEEEEEEe
Q 017755 325 LKDHKQDVIEIR 336 (366)
Q Consensus 325 l~t~~~~~v~~~ 336 (366)
++.+....+...
T Consensus 265 ~~g~~~~~~~~~ 276 (305)
T 3dr2_A 265 SDGQLLGHIPTP 276 (305)
T ss_dssp TTSCEEEEEECS
T ss_pred CCCCEEEEEECC
Confidence 987777777543
No 191
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=64.58 E-value=61 Score=26.96 Aligned_cols=59 Identities=14% Similarity=0.233 Sum_probs=38.1
Q ss_pred eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 267 RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 267 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
++.||-++. .+-.+..... .... ...-+++.++|+.++-...++.+.+||+++++....
T Consensus 46 tV~iWd~~t----g~~~~~~~~~--~~~~--~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 46 SVYLWSASS----GDILQLLQME--QPGE--YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp EEEEEETTT----CCEEEEEECC--STTC--CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEEECCC----CCEEEEEEec--CCCC--eEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 799997663 2233333222 2111 355678888999666667777899999999976443
No 192
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=62.80 E-value=27 Score=34.05 Aligned_cols=118 Identities=9% Similarity=0.099 Sum_probs=61.2
Q ss_pred CceEECCeEEEEEeeCCCCCCcceEEEEECCCce--eEEECCCCCC-------CCCeeeEEEEECCEEEEEEecCCCCeE
Q 017755 198 NGVFIAGALHWLAARGSVRTGQNMILAFDLKSEK--FYEVQQPHGM-------KGGFCSQVGVLRGCLWINSYYHDEPRC 268 (366)
Q Consensus 198 ~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~--~~~i~~P~~~-------~~~~~~~l~~~~G~L~~v~~~~~~~~l 268 (366)
.+++.+|.+|...... .+.++|..+.+ |+. +.+... .+.....++..+|+|++.... .
T Consensus 72 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d-g---- 138 (677)
T 1kb0_A 72 TPVVVDGIMYVSASWS-------VVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD-G---- 138 (677)
T ss_dssp CCEEETTEEEEECGGG-------CEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT-S----
T ss_pred CCEEECCEEEEECCCC-------eEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEcCC-C----
Confidence 4788999999887643 79999998654 554 222110 011122345567777765432 1
Q ss_pred EEEEEeecCCCCCeeEEEEec-CCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEEEE
Q 017755 269 DIWVMKEYGSQQSWSKLCSFS-KMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 269 ~iW~l~~~~~~~~W~~~~~i~-~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~~v 333 (366)
.|..++-...+..|... .. ...........|+. .++.|++... +..++.||.+|++...-
T Consensus 139 ~l~alD~~tG~~~W~~~--~~~~~~~~~~~~~~p~v---~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQN--TFEGQKGSLTITGAPRV---FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp EEEEEETTTCCEEEEEE--TTTTCCSSCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCEEeeec--CCcCcCcCcccccCcEE---ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 23444432224456532 11 00000000122332 1344666543 35699999999986543
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=62.79 E-value=61 Score=26.36 Aligned_cols=195 Identities=10% Similarity=0.015 Sum_probs=93.7
Q ss_pred EEEecccceEEe-e-ecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEE
Q 017755 95 SVIGCCHGLLAM-F-NRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEV 172 (366)
Q Consensus 95 ~~~~s~nGLl~~-~-~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 172 (366)
.+.-+.+|-+.+ . .....+.++|+.++....++..... ...++.+|+.. . +... . ..-.+
T Consensus 28 ~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------~p~~i~~~~~g-~--l~v~-~----~~~~i 89 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY----------QPQGLAVDGAG-T--VYVT-D----FNNRV 89 (270)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCC----------SCCCEEECTTC-C--EEEE-E----TTTEE
T ss_pred ceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcC----------CcceeEECCCC-C--EEEE-c----CCCEE
Confidence 344445565555 4 3456788999988776665433211 12246667642 2 2221 1 12356
Q ss_pred EEEEcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEE
Q 017755 173 IIYSLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVG 250 (366)
Q Consensus 173 ~vyss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~ 250 (366)
.+|+..++.-........ ....++.+ +|.+|+..... ..|..+|..+......... ... .-..++
T Consensus 90 ~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~-~~~--~p~~i~ 156 (270)
T 1rwi_B 90 VTLAAGSNNQTVLPFDGL----NYPEGLAVDTQGAVYVADRGN------NRVVKLAAGSKTQTVLPFT-GLN--DPDGVA 156 (270)
T ss_dssp EEECTTCSCCEECCCCSC----SSEEEEEECTTCCEEEEEGGG------TEEEEECTTCCSCEECCCC-SCC--SCCCEE
T ss_pred EEEeCCCceEeeeecCCc----CCCcceEECCCCCEEEEECCC------CEEEEEECCCceeEeeccc-cCC--CceeEE
Confidence 677776654333321100 00113333 67877655433 3788888776654432211 111 112233
Q ss_pred EE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEECCCC
Q 017755 251 VL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNLKDH 328 (366)
Q Consensus 251 ~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t~ 328 (366)
.. +|+|++...... .+.+|..+. .. ........+ ....-+++.++|. +++... ...+..||++++
T Consensus 157 ~~~~g~l~v~~~~~~--~i~~~~~~~---~~----~~~~~~~~~---~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 157 VDNSGNVYVTDTDNN--RVVKLEAES---NN----QVVLPFTDI---TAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp ECTTCCEEEEEGGGT--EEEEECTTT---CC----EEECCCSSC---CSEEEEEECTTCC-EEEEETTTSCEEEECTTCS
T ss_pred EeCCCCEEEEECCCC--EEEEEecCC---Cc----eEeecccCC---CCceEEEECCCCC-EEEEECCCCcEEEEcCCCC
Confidence 33 578877765433 455554332 11 111111111 1244466777775 777764 345999999887
Q ss_pred cEEEE
Q 017755 329 KQDVI 333 (366)
Q Consensus 329 ~~~~v 333 (366)
....+
T Consensus 224 ~~~~~ 228 (270)
T 1rwi_B 224 TSTVL 228 (270)
T ss_dssp CCEEC
T ss_pred cceee
Confidence 65543
No 194
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=62.60 E-value=66 Score=26.72 Aligned_cols=200 Identities=12% Similarity=0.104 Sum_probs=89.7
Q ss_pred cccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 99 CCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 99 s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
|.+|+|... .++.+.|||+.|++...+-..... ......+.+.|. +++-+.+ . ..-.+.+++.+
T Consensus 34 S~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~--------~~~V~~v~~~~~-~~~l~sg--s----~Dg~v~iw~~~ 97 (318)
T 4ggc_A 34 SSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQP--------GEYISSVAWIKE-GNYLAVG--T----SSAEVQLWDVQ 97 (318)
T ss_dssp CTTSEEEEE-ETTEEEEEETTTCCEEEEEECCST--------TCCEEEEEECTT-SSEEEEE--E----TTSEEEEEETT
T ss_pred CCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCC--------CCeEEEEEECCC-CCEEEEE--E----CCCcEEEeecC
Confidence 567776544 367899999999987654322211 112334556654 2332222 1 23457778877
Q ss_pred CCcEEe-cCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEECCEEE
Q 017755 179 ADTWRR-TREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVLRGCLW 257 (366)
Q Consensus 179 ~~~W~~-~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~~G~L~ 257 (366)
+++-.. ...-.. .......++.+-..+... ..+...+..+.......+..+... ........+|++.
T Consensus 98 ~~~~~~~~~~h~~-----~~~~~~~~~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 165 (318)
T 4ggc_A 98 QQKRLRNMTSHSA-----RVGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQE-VCGLRWAPDGRHL 165 (318)
T ss_dssp TTEEEEEEECCSS-----CEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSSC-EEEEEECTTSSEE
T ss_pred CceeEEEecCccc-----eEEEeecCCCEEEEEecC------CceEeeecCCCceeEEEEcCccCc-eEEEEEcCCCCEE
Confidence 763211 111000 001223333333333222 245555555443322222111111 1112222245555
Q ss_pred EEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEE-EEc--CCeEEEEECCCCcEEEEE
Q 017755 258 INSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALI-YQH--SRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 258 ~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l-~~~--~~~l~~ydl~t~~~~~v~ 334 (366)
+...... .+.||-+..... ............- ....+.+.+++..++. ... +..+.++|.+++......
T Consensus 166 ~s~~~d~--~i~iwd~~~~~~--~~~~~~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~ 237 (318)
T 4ggc_A 166 ASGGNDN--LVNVWPSAPGEG--GWVPLQTFTQHQG----AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 237 (318)
T ss_dssp EEEETTS--CEEEEESSCBTT--BSCCSEEECCCCS----CEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE
T ss_pred EEEecCc--ceeEEECCCCcc--cccceeeecccCC----ceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc
Confidence 5544444 699998875321 1111111111110 1333444454433433 322 235888898888766553
No 195
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=62.05 E-value=63 Score=26.28 Aligned_cols=186 Identities=15% Similarity=0.080 Sum_probs=96.1
Q ss_pred CceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCC-CcEEecCCC
Q 017755 110 RLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKA-DTWRRTREF 188 (366)
Q Consensus 110 ~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~-~~W~~~~~~ 188 (366)
...++++|+.+++...+...... ...+.+.|.. ++-++ .. .-.+.+++..+ +..+.+...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~-----------v~~~~~spdg-~~l~~--~~-----~~~i~~~d~~~~~~~~~~~~~ 81 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPEL-----------FEAPNWSPDG-KYLLL--NS-----EGLLYRLSLAGDPSPEKVDTG 81 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSC-----------CEEEEECTTS-SEEEE--EE-----TTEEEEEESSSCCSCEECCCT
T ss_pred ceeEEEEeCCCCceeeeccCCcc-----------eEeeEECCCC-CEEEE--Ec-----CCeEEEEeCCCCCCceEeccc
Confidence 45789999999987765443211 1235555543 22222 21 23688889888 766655422
Q ss_pred CceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCE-EEEEEecCCCC
Q 017755 189 PYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGC-LWINSYYHDEP 266 (366)
Q Consensus 189 p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~-L~~v~~~~~~~ 266 (366)
...... ..-...-+|........... ....|..+|+.+.+...+..... ...+... +|+ |++......
T Consensus 82 ~~~~~~-~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~~~~-- 151 (297)
T 2ojh_A 82 FATICN-NDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNLP-----SYWHGWSPDGKSFTYCGIRDQ-- 151 (297)
T ss_dssp TCCCBC-SCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSSS-----EEEEEECTTSSEEEEEEEETT--
T ss_pred cccccc-cceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCCC-----ccceEECCCCCEEEEEECCCC--
Confidence 210000 00112235654444442211 12578888988776555433221 1122222 454 444444333
Q ss_pred eEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CC--eEEEEECCCCcEEEE
Q 017755 267 RCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SR--CLHWYNLKDHKQDVI 333 (366)
Q Consensus 267 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~--~l~~ydl~t~~~~~v 333 (366)
.+.||.++... ... ..+....- ...-+.+.++|+.+++... +. .++.+++.++..+.+
T Consensus 152 ~~~l~~~~~~~--~~~---~~~~~~~~----~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 152 VFDIYSMDIDS--GVE---TRLTHGEG----RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EEEEEEEETTT--CCE---EECCCSSS----CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred ceEEEEEECCC--Ccc---eEcccCCC----ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 68999987532 222 22211111 2445677788886666653 32 477777777776655
No 196
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=61.91 E-value=86 Score=27.80 Aligned_cols=191 Identities=10% Similarity=0.125 Sum_probs=96.1
Q ss_pred cceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCC
Q 017755 101 HGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKAD 180 (366)
Q Consensus 101 nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~ 180 (366)
.+.|++.. ...+...++.+++...+-+. .....++.+|+..+...+. + ...-.+..++..+.
T Consensus 87 ~~~l~~~~-~~~I~~i~~~~~~~~~~~~~-----------~~~~~gl~~d~~~~~ly~~----D--~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 87 EPVLLFAN-RIDIRQVLPHRSEYTLLLNN-----------LENAIALDFHHRRELVFWS----D--VTLDRILRANLNGS 148 (386)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCCEEEECS-----------CSCEEEEEEETTTTEEEEE----E--TTTTEEEEEETTSC
T ss_pred cceeEeec-CccceeeccCCCcEEEEecC-----------CCccEEEEEecCCCeEEEE----e--CCCCcEEEEecCCC
Confidence 44444443 34566666666554433221 1124577888765432222 1 12335666677665
Q ss_pred cEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE--CCE
Q 017755 181 TWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL--RGC 255 (366)
Q Consensus 181 ~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~--~G~ 255 (366)
..+.+.... .. ...++.+ +|.|||..... ..|..+|+....-..+. ..... .-..+++. +|.
T Consensus 149 ~~~~~~~~~--~~--~p~glavd~~~g~lY~~d~~~------~~I~~~~~dg~~~~~l~-~~~l~--~P~giavdp~~g~ 215 (386)
T 3v65_B 149 NVEEVVSTG--LE--SPGGLAVDWVHDKLYWTDSGT------SRIEVANLDGAHRKVLL-WQSLE--KPRAIALHPMEGT 215 (386)
T ss_dssp CEEEEECSS--CS--CCCCEEEETTTTEEEEEETTT------TEEEECBTTSCSCEEEE-CSSCS--CEEEEEEETTTTE
T ss_pred CcEEEEeCC--CC--CccEEEEEeCCCeEEEEcCCC------CeEEEEeCCCCceEEee-cCCCC--CCcEEEEEcCCCe
Confidence 544432111 00 1123433 68999987654 37999998765433331 11211 12344444 678
Q ss_pred EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcEEEE
Q 017755 256 LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 256 L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~~~v 333 (366)
|+...... .-.|++.+..+. -.+ .+....+ ....-+++.++++.||+.... ..+..+|++....+.+
T Consensus 216 ly~td~~~---~~~I~r~~~dG~---~~~--~~~~~~~---~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 216 IYWTDWGN---TPRIEASSMDGS---GRR--IIADTHL---FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp EEEEECSS---SCEEEEEETTSC---SCE--EEECSSC---SCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEE
T ss_pred EEEeccCC---CCEEEEEeCCCC---CcE--EEEECCC---CCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEE
Confidence 88876543 135666654321 111 1111111 124446777666668887643 4588888876554444
No 197
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=61.71 E-value=76 Score=27.13 Aligned_cols=203 Identities=10% Similarity=0.045 Sum_probs=99.0
Q ss_pred EEEecccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCC-CCCeeEEEEEEecccceeEEE
Q 017755 95 SVIGCCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDAS-TDDYKLVRIIQSYKVDYLEVI 173 (366)
Q Consensus 95 ~~~~s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~-~~~ykVv~~~~~~~~~~~~~~ 173 (366)
.+.++.+|.+.+-+......++|..+++...--.... ......+.+.|. .+++-+.+ . ..-.+.
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~~~l~s~-s-----~dg~i~ 152 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS---------ANEIIYMYGHNEVNTEYFIWA-D-----NRGTIG 152 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC---------SSCEEEEECCC---CCEEEEE-E-----TTCCEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCC---------CCCEEEEEcCCCCCCCEEEEE-e-----CCCcEE
Confidence 4556667877776666778888888887332111111 112335666662 23332222 1 234577
Q ss_pred EEEcCCCcEEecCCCCceeecCCCCceE--ECCeEEEEEeeCCCCCCcceEEEEECCCceeE--EECCCCCCCCCeeeEE
Q 017755 174 IYSLKADTWRRTREFPYYILDDRCNGVF--IAGALHWLAARGSVRTGQNMILAFDLKSEKFY--EVQQPHGMKGGFCSQV 249 (366)
Q Consensus 174 vyss~~~~W~~~~~~p~~~~~~~~~~v~--~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~--~i~~P~~~~~~~~~~l 249 (366)
+|+.+++.-........... ...+. -+|.+...+..+ ..|..+|+.+.+-. .+...+. ..-..+
T Consensus 153 ~wd~~~~~~~~~~~~~~~~~---i~~~~~~pdg~~lasg~~d------g~i~iwd~~~~~~~~~~~~~~h~---~~v~~l 220 (343)
T 3lrv_A 153 FQSYEDDSQYIVHSAKSDVE---YSSGVLHKDSLLLALYSPD------GILDVYNLSSPDQASSRFPVDEE---AKIKEV 220 (343)
T ss_dssp EEESSSSCEEEEECCCSSCC---CCEEEECTTSCEEEEECTT------SCEEEEESSCTTSCCEECCCCTT---SCEEEE
T ss_pred EEECCCCcEEEEEecCCCCc---eEEEEECCCCCEEEEEcCC------CEEEEEECCCCCCCccEEeccCC---CCEEEE
Confidence 88887764422211110000 01222 245555544444 37999999887643 3333111 112233
Q ss_pred EEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEEC--
Q 017755 250 GVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNL-- 325 (366)
Q Consensus 250 ~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl-- 325 (366)
.-. +|...+... .. .+.+|-+........... +....... ....+++.++|..++.... +..+.+|+.
T Consensus 221 ~fs~~g~~l~s~~-~~--~v~iwd~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 221 KFADNGYWMVVEC-DQ--TVVCFDLRKDVGTLAYPT---YTIPEFKT--GTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp EECTTSSEEEEEE-SS--BEEEEETTSSTTCBSSCC---CBC-------CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEeCCCCEEEEEe-CC--eEEEEEcCCCCcceeecc---cccccccc--cceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 333 455444444 33 799998875321111100 00000100 1134788889986666555 667888887
Q ss_pred CCCcEEE
Q 017755 326 KDHKQDV 332 (366)
Q Consensus 326 ~t~~~~~ 332 (366)
..+.|+.
T Consensus 293 ~~~~~~~ 299 (343)
T 3lrv_A 293 KTKNWTK 299 (343)
T ss_dssp TTCSEEE
T ss_pred cccceEe
Confidence 4445665
No 198
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=61.71 E-value=38 Score=32.87 Aligned_cols=119 Identities=12% Similarity=0.099 Sum_probs=60.5
Q ss_pred CceEECCeEEEEEeeCCCCCCcceEEEEECCC--ceeEEE-CCCCCC-----CCCeeeEEEEECCEEEEEEecCCCCeEE
Q 017755 198 NGVFIAGALHWLAARGSVRTGQNMILAFDLKS--EKFYEV-QQPHGM-----KGGFCSQVGVLRGCLWINSYYHDEPRCD 269 (366)
Q Consensus 198 ~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~--e~~~~i-~~P~~~-----~~~~~~~l~~~~G~L~~v~~~~~~~~l~ 269 (366)
.+++.+|.+|...... .+.++|..+ +.|+.- ..+... .+.....++..+|++++.... . .
T Consensus 61 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-g----~ 128 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSWS-------RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD-G----R 128 (668)
T ss_dssp CCEEETTEEEEEEGGG-------EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT-S----E
T ss_pred CCEEECCEEEEECCCC-------eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC-C----E
Confidence 4788999999987653 799999875 456642 222110 010122344456777665421 1 3
Q ss_pred EEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEEEE
Q 017755 270 IWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 270 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~~v 333 (366)
|..++-...+..|.... ............|+. .+| .|++... +..++.+|.+|++...-
T Consensus 129 l~alD~~tG~~~W~~~~--~~~~~~~~~~~~P~v--~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQQT--TDPAKPYSITGAPRV--VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EEEEETTTCCEEEEEEC--SCTTSSCBCCSCCEE--ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEEECCCCCEeeeecc--CCCCCcceecCCCEE--ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 44444322245565422 111000000122322 133 4666543 24699999999986544
No 199
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=61.21 E-value=86 Score=27.55 Aligned_cols=97 Identities=13% Similarity=0.187 Sum_probs=52.0
Q ss_pred ceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCC--CC
Q 017755 220 NMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKML--HE 294 (366)
Q Consensus 220 ~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~--~~ 294 (366)
..|..+|+.+.+.... ..... ...+... +|++.+...... .+.+|-++.. . .+..+.... ..
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~s~d~--~v~iwd~~~~----~--~~~~~~~~~~~~~ 253 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSIEDG-----VTTVAVSPGDGKYIAAGSLDR--AVRVWDSETG----F--LVERLDSENESGT 253 (393)
T ss_dssp SEEEEEETTTTEEEEEEECSSC-----EEEEEECSTTCCEEEEEETTS--CEEEEETTTC----C--EEEEEC------C
T ss_pred CcEEEEECCCCeeEEEEEcCCC-----cEEEEEECCCCCEEEEEcCCC--cEEEEECCCC----c--EEEeecccccCCC
Confidence 3788899988765432 32111 2223332 566666555444 6999976531 1 122222111 01
Q ss_pred Ccc-eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCc
Q 017755 295 TCY-YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 295 ~~~-~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~ 329 (366)
+.. ...-+.+.++|+.++-...++.+.+||+++..
T Consensus 254 ~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 254 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 111 35557788899866666677789999998753
No 200
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=61.18 E-value=1.2e+02 Score=29.24 Aligned_cols=190 Identities=11% Similarity=0.099 Sum_probs=96.7
Q ss_pred eEEEEcCCC-cceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCCc
Q 017755 112 GMSVFNPTT-KKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFPY 190 (366)
Q Consensus 112 ~~~V~NP~t-~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~ 190 (366)
.++++|..+ ++...+...... ......+.+ |. +++-++. ..........+.+++..++..+.+.....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~~-pD-g~~l~~~-~~~~~~~~~~i~~~d~~~g~~~~~~~~~~ 332 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQ--------DIYLARVNW-RD-PQHLSFQ-RQSRDQKKLDLVEVTLASNQQRVLAHETS 332 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCS--------SEEEEEEEE-EE-TTEEEEE-EEETTSSEEEEEEEETTTCCEEEEEEEEC
T ss_pred EEEEEECCCCCceEEecCCCCc--------ceEEEEEEe-CC-CCEEEEE-EecccCCeEEEEEEECCCCceEEEEEcCC
Confidence 688899988 887665433111 122334555 43 3332222 22222456778888888887665432110
Q ss_pred e--eecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEE--EEECC-EEEEEEecCCC
Q 017755 191 Y--ILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQV--GVLRG-CLWINSYYHDE 265 (366)
Q Consensus 191 ~--~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l--~~~~G-~L~~v~~~~~~ 265 (366)
. ..........-+|.+++....+. ...|..+|+.+. ...+. .+.. ....+ ..-+| .|++.......
T Consensus 333 ~~~~~~~~~~~~spdg~~~~~~~~~g----~~~l~~~~~~~~-~~~l~--~~~~--~v~~~~~~s~dg~~l~~~~~~~~~ 403 (741)
T 2ecf_A 333 PTWVPLHNSLRFLDDGSILWSSERTG----FQHLYRIDSKGK-AAALT--HGNW--SVDELLAVDEKAGLAYFRAGIESA 403 (741)
T ss_dssp SSCCCCCSCCEECTTSCEEEEECTTS----SCEEEEECSSSC-EEESC--CSSS--CEEEEEEEETTTTEEEEEECSSCT
T ss_pred CCcCCcCCceEECCCCeEEEEecCCC----ccEEEEEcCCCC-eeeee--ecce--EEEeEeEEeCCCCEEEEEEeCCCC
Confidence 0 00001112234788777665432 247888887665 43332 2211 12222 22245 45555544433
Q ss_pred CeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC----CeEEEEECCCCcEE
Q 017755 266 PRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS----RCLHWYNLKDHKQD 331 (366)
Q Consensus 266 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~----~~l~~ydl~t~~~~ 331 (366)
..+.||.++..+. ....+.... ....+.+.++|+.+++...+ ..++.+|.+++..+
T Consensus 404 ~~~~l~~~~~~g~-----~~~~l~~~~-----~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~ 463 (741)
T 2ecf_A 404 RESQIYAVPLQGG-----QPQRLSKAP-----GMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIA 463 (741)
T ss_dssp TCBEEEEEETTCC-----CCEECCCSC-----SEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEE
T ss_pred ceEEEEEEEcCCC-----CeeecccCC-----CceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEE
Confidence 3689999874221 122232211 24467888899877766432 24888887665443
No 201
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=61.13 E-value=73 Score=26.73 Aligned_cols=101 Identities=10% Similarity=0.035 Sum_probs=56.4
Q ss_pred eEEEEECCCcee-EEECCCCCCCCCeeeEEEE-ECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcce
Q 017755 221 MILAFDLKSEKF-YEVQQPHGMKGGFCSQVGV-LRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYY 298 (366)
Q Consensus 221 ~i~~fD~~~e~~-~~i~~P~~~~~~~~~~l~~-~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 298 (366)
.|..+|+.+.+. ..+...... ...+.- -+|++.+...... .+.+|-++.. ..+..+....- .
T Consensus 36 ~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~s~d~--~i~vwd~~~~------~~~~~~~~h~~----~ 99 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGSDDF--RIRVFNYNTG------EKVVDFEAHPD----Y 99 (304)
T ss_dssp EEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEETTS--EEEEEETTTC------CEEEEEECCSS----C
T ss_pred cEEEEECCCCceeEEeeccCCc----EEEEEEeCCCCEEEEECCCC--EEEEEECCCC------cEEEEEeCCCC----c
Confidence 788888887654 333332221 112222 2455555554444 7999987642 12333322111 3
Q ss_pred eEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEEEEec
Q 017755 299 TEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVIEIRN 337 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v~~~~ 337 (366)
..-+++.+++..++-...++.+.+||++++....-.+.+
T Consensus 100 v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~ 138 (304)
T 2ynn_A 100 IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG 138 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC
T ss_pred EEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc
Confidence 556788888886666666777999999887433333343
No 202
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=60.53 E-value=90 Score=27.60 Aligned_cols=212 Identities=13% Similarity=0.095 Sum_probs=107.6
Q ss_pred ecccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEc
Q 017755 98 GCCHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSL 177 (366)
Q Consensus 98 ~s~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss 177 (366)
++...+++.++....++|+|..=++...+|...... .-.+.+|... .+..-++.+.. .....-.+.+|+.
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl~G~~l~~~~~g~~nn-------VD~r~~~~l~--g~~~dla~as~-R~~~~n~l~vf~i 106 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSLDGKMLHSYNTGKLNN-------VDIRYDFPLN--GKKVDIAAASN-RSEGKNTIEIYAI 106 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEETTSCEEEEECCSCEEE-------EEEEEEEEET--TEEEEEEEEEE-CSTTCCEEEEEEE
T ss_pred CCCccEEEEEcCCCCEEEEcCCCcEEEEccCCCccc-------EEEecccccC--CceEeEEEEeC-CCCCCCeEEEEEE
Confidence 345667666666778999999555566776522111 1122233221 11111333322 1111456888855
Q ss_pred --CCCcEEecCCC--CceeecCCCCceEE-----CCeEEEEEeeCCCCCCcceEEEEEC---CC-----ceeEEECCCCC
Q 017755 178 --KADTWRRTREF--PYYILDDRCNGVFI-----AGALHWLAARGSVRTGQNMILAFDL---KS-----EKFYEVQQPHG 240 (366)
Q Consensus 178 --~~~~W~~~~~~--p~~~~~~~~~~v~~-----~G~lyw~~~~~~~~~~~~~i~~fD~---~~-----e~~~~i~~P~~ 240 (366)
.++.++.+..+ |.........++++ .|.+|-+.....+ .+..|++ .+ +.-+.+.+|..
T Consensus 107 Dp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G-----~~~q~~l~~~~~g~~~~~lVR~f~lgsq 181 (355)
T 3amr_A 107 DGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEG-----EFEQYELKADKNGYISGKKVRAFKMNSQ 181 (355)
T ss_dssp CTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSS-----EEEEEEEEECTTSCEEEEEEEEEECSSC
T ss_pred CCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCC-----eEEEEEEEeCCCCcccceEEEEecCCCC
Confidence 67789998654 42111122235555 4677777766542 4555554 22 23345566643
Q ss_pred CCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCC-CCCeeEEEEecCCCCCCcceeEEEEE--EeCCC-eEEEEE
Q 017755 241 MKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGS-QQSWSKLCSFSKMLHETCYYTEAFAF--SKDGD-KALIYQ 315 (366)
Q Consensus 241 ~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~-~~~W~~~~~i~~~~~~~~~~~~~~~~--~~~g~-~i~l~~ 315 (366)
. ....+.- .|+|++.... ..||.++-... ..+-..+..+....+... ..-+++ .++|+ .++...
T Consensus 182 ~----EgcvvDd~~g~Lyv~eEd-----~GIw~~da~p~~~~~~~~v~~~~~g~l~aD--vEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 182 T----EGMAADDEYGRLYIAEED-----EAIWKFSAEPDGGSNGTVIDRADGRHLTRD--IEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp E----EEEEEETTTTEEEEEETT-----TEEEEEECSTTSCSCCEEEEEBSSSSBCSC--EEEEEEEECGGGCEEEEEEE
T ss_pred c----ceEEEcCCCCeEEEeccc-----ceEEEEeCCcCCCCCceEEEEecCCccccC--cceEEEEecCCCCEEEEEEc
Confidence 2 2222222 3788887653 35999984211 223555656654443211 222334 34555 455555
Q ss_pred c-CCeEEEEECC-CCc-EEEEEE
Q 017755 316 H-SRCLHWYNLK-DHK-QDVIEI 335 (366)
Q Consensus 316 ~-~~~l~~ydl~-t~~-~~~v~~ 335 (366)
. ...+.+||.+ +.+ +..+.+
T Consensus 251 QG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 251 QGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp GGGTEEEEEESSTTCCEEEEEEE
T ss_pred CCCCEEEEEECCCCCcEEEEEEe
Confidence 3 3469999996 444 334444
No 203
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=60.32 E-value=99 Score=28.00 Aligned_cols=148 Identities=9% Similarity=0.022 Sum_probs=72.5
Q ss_pred EEec--ccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEE
Q 017755 96 VIGC--CHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVI 173 (366)
Q Consensus 96 ~~~s--~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 173 (366)
.++. .+|.|.+.+....+.+++|.+++...+.... ....++.+|+..+ +.............+.
T Consensus 145 avd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~-----------~~P~giavd~dG~---lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 145 MFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNI-----------GQCADVNFTLNGD---MVVVDDQSSDTNTGIY 210 (433)
T ss_dssp EECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCC-----------SCEEEEEECTTCC---EEEEECCSCTTSEEEE
T ss_pred EEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCC-----------CCccEEEECCCCC---EEEEcCCCCcccceEE
Confidence 4444 3577766654478888999888877664421 1244677887654 2222111001112222
Q ss_pred EEEcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCcee-EEE-CCCCCCCCCeeeE
Q 017755 174 IYSLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKF-YEV-QQPHGMKGGFCSQ 248 (366)
Q Consensus 174 vyss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~-~~i-~~P~~~~~~~~~~ 248 (366)
.+.. .+.|.....++ ......++.+ +|.+|+..... ..|..||+.+.+. ..+ ...... ....
T Consensus 211 ~~~~-~~~~~~~~~~~---~~~~P~giavd~~~G~lyv~d~~~------~~V~~~d~~~g~~~~~~~~~~~~~---~~~~ 277 (433)
T 4hw6_A 211 LFTR-ASGFTERLSLC---NARGAKTCAVHPQNGKIYYTRYHH------AMISSYDPATGTLTEEEVMMDTKG---SNFH 277 (433)
T ss_dssp EECG-GGTTCCEEEEE---ECSSBCCCEECTTTCCEEECBTTC------SEEEEECTTTCCEEEEEEECSCCS---SCEE
T ss_pred EEEC-CCCeecccccc---ccCCCCEEEEeCCCCeEEEEECCC------CEEEEEECCCCeEEEEEeccCCCC---Cccc
Confidence 2322 22222100111 1111124444 68888876543 3799999986665 322 222111 1223
Q ss_pred EEEE-CC-EEEEEEecCCCCeEEEEEEe
Q 017755 249 VGVL-RG-CLWINSYYHDEPRCDIWVMK 274 (366)
Q Consensus 249 l~~~-~G-~L~~v~~~~~~~~l~iW~l~ 274 (366)
++.. +| .|+++..... .|++++
T Consensus 278 ia~dpdG~~LYvad~~~~----~I~~~~ 301 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYNGKH----CIYRVD 301 (433)
T ss_dssp EEECTTSSEEEEEETTTT----EEEEEE
T ss_pred EEEeCCCCEEEEEeCCCC----EEEEEe
Confidence 4444 35 4877765433 555554
No 204
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=59.87 E-value=80 Score=26.77 Aligned_cols=195 Identities=8% Similarity=0.016 Sum_probs=94.7
Q ss_pred eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCC--
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKAD-- 180 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~-- 180 (366)
+++....++.+.+||..+++....-.... ....+.+.|. +.+-+++ ........-.+.+|+..++
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------~v~~~~~~~~-~~~l~~~-~~~~~~~~g~i~~~d~~~~~~ 154 (369)
T 3zwl_B 88 YCVTGSADYSIKLWDVSNGQCVATWKSPV-----------PVKRVEFSPC-GNYFLAI-LDNVMKNPGSINIYEIERDSA 154 (369)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECSS-----------CEEEEEECTT-SSEEEEE-ECCBTTBCCEEEEEEEEECTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEeecCC-----------CeEEEEEccC-CCEEEEe-cCCccCCCCEEEEEEecCCcc
Confidence 44444457789999998887654322211 1234555553 2222222 1111112245666666443
Q ss_pred --cEEecCCCCceee-cC----CCCce--EECCeEEEEEeeCCCCCCcceEEEEECCC-ce-eEEECCCCCCCCCeeeEE
Q 017755 181 --TWRRTREFPYYIL-DD----RCNGV--FIAGALHWLAARGSVRTGQNMILAFDLKS-EK-FYEVQQPHGMKGGFCSQV 249 (366)
Q Consensus 181 --~W~~~~~~p~~~~-~~----~~~~v--~~~G~lyw~~~~~~~~~~~~~i~~fD~~~-e~-~~~i~~P~~~~~~~~~~l 249 (366)
.+......+.... .. ....+ .-+|.....+..+ ..|..+|+.+ .+ ...+...... ...+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~----v~~~ 224 (369)
T 3zwl_B 155 THELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD------GKISKYDVSNNYEYVDSIDLHEKS----ISDM 224 (369)
T ss_dssp TCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT------SEEEEEETTTTTEEEEEEECCSSC----EEEE
T ss_pred ceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC------CEEEEEECCCCcEeEEEEecCCCc----eeEE
Confidence 2222221111111 00 00111 1245544444443 3799999987 33 3333332221 2223
Q ss_pred EEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCC----------
Q 017755 250 GVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSR---------- 318 (366)
Q Consensus 250 ~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~---------- 318 (366)
... +|.+.++..... .+.+|-++.. ..+..+.... ....+.+.++|..++....+.
T Consensus 225 ~~~~~~~~l~~~~~d~--~i~v~d~~~~------~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 291 (369)
T 3zwl_B 225 QFSPDLTYFITSSRDT--NSFLVDVSTL------QVLKKYETDC-----PLNTAVITPLKEFIILGGGQEAKDVTTTSAN 291 (369)
T ss_dssp EECTTSSEEEEEETTS--EEEEEETTTC------CEEEEEECSS-----CEEEEEECSSSSEEEEEECCC----------
T ss_pred EECCCCCEEEEecCCc--eEEEEECCCC------ceeeeecCCC-----CceeEEecCCCceEEEeecCCCceEEEEecC
Confidence 322 465555554444 7999987642 1233333222 245566777787666655443
Q ss_pred ----eEEEEECCCCcEEEE
Q 017755 319 ----CLHWYNLKDHKQDVI 333 (366)
Q Consensus 319 ----~l~~ydl~t~~~~~v 333 (366)
.+..||.++++....
T Consensus 292 ~~~~~i~~~d~~~~~~~~~ 310 (369)
T 3zwl_B 292 EGKFEARFYHKIFEEEIGR 310 (369)
T ss_dssp ---CEEEEEETTTCCEEEE
T ss_pred CCcceeEEEecCCCcchhh
Confidence 589999988875443
No 205
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=58.96 E-value=92 Score=27.15 Aligned_cols=195 Identities=11% Similarity=0.012 Sum_probs=98.4
Q ss_pred EecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEE
Q 017755 97 IGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIY 175 (366)
Q Consensus 97 ~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vy 175 (366)
.+..+|.|...+ ....++.+++.++....+...... ...++.+|+..+...+.- .....++++
T Consensus 80 ~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~----------~p~glavd~~~g~ly~~d------~~~~~I~~~ 143 (349)
T 3v64_C 80 FHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE----------SPGGLAVDWVHDKLYWTD------SGTSRIEVA 143 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS----------CCCEEEEETTTTEEEEEE------TTTTEEEEE
T ss_pred EeccccEEEEEeccCCceEEEecCCCCceEEEeCCCC----------CccEEEEecCCCeEEEEc------CCCCeEEEE
Confidence 345677776665 356788888887765443222211 123677776554422221 123466777
Q ss_pred EcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE
Q 017755 176 SLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL 252 (366)
Q Consensus 176 ss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~ 252 (366)
+..+..-+.+..-. . ....++.+ +|.+||...... ..|..+|+....-+.+ ...... .--.|+..
T Consensus 144 ~~dG~~~~~l~~~~--l--~~P~~iavdp~~g~ly~td~~~~-----~~I~r~~~dG~~~~~~-~~~~~~--~PnGla~d 211 (349)
T 3v64_C 144 NLDGAHRKVLLWQS--L--EKPRAIALHPMEGTIYWTDWGNT-----PRIEASSMDGSGRRII-ADTHLF--WPNGLTID 211 (349)
T ss_dssp ETTSCSCEEEECTT--C--SCEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEES-CCSSCS--CEEEEEEE
T ss_pred cCCCCceEEEEeCC--C--CCcceEEEecCcCeEEEeccCCC-----CEEEEEeCCCCCcEEE-EECCCC--CcceEEEe
Confidence 77654322221100 0 00123333 689999876541 3799999876544333 111221 12234443
Q ss_pred --CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCc
Q 017755 253 --RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHK 329 (366)
Q Consensus 253 --~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~ 329 (366)
+|+||++..... .|+..+..+. . ...+-...+ ..|.++.-+++.+|+.... ..+..+|..+++
T Consensus 212 ~~~~~lY~aD~~~~----~I~~~~~dG~-~----~~~~~~~~~-----~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 212 YAGRRMYWVDAKHH----VIERANLDGS-H----RKAVISQGL-----PHPFAITVFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp TTTTEEEEEETTTT----EEEEEETTSC-S----CEEEECSSC-----SSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCEEEEEECCCC----EEEEEeCCCC-c----eEEEEeCCC-----CCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence 689998876433 4555553221 1 111111111 2333333334558887644 469999965655
Q ss_pred -EEEE
Q 017755 330 -QDVI 333 (366)
Q Consensus 330 -~~~v 333 (366)
.+.+
T Consensus 278 ~~~~i 282 (349)
T 3v64_C 278 NQEII 282 (349)
T ss_dssp SCEEE
T ss_pred ccEEe
Confidence 3444
No 206
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=58.88 E-value=7.6 Score=28.43 Aligned_cols=43 Identities=2% Similarity=-0.160 Sum_probs=22.5
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEee---cCCCCCeeEEEEE
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGY---DASTDDYKLVRII 162 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~---d~~~~~ykVv~~~ 162 (366)
-+++.+||.++.|...-.. .. ......+.. |...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~g--~l-------s~v~i~~~~~~~d~~~~~yrIv~~~ 56 (118)
T 1xod_A 11 AVVMTRDDSSGGWLQLGGG--GL-------SSVTVSKTLQPGDSGGTEFLVHGER 56 (118)
T ss_dssp EEEEEECSSSSCEEEGGGC--CC-------EEEEEECC---------CCEEEEEE
T ss_pred EEEeeEcCCCCCEeeCCCC--Cc-------ccEEEEEecCcCCCCCCEEEEEEEE
Confidence 3688999999998665332 11 111212222 4456789999865
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=58.22 E-value=1.4e+02 Score=29.05 Aligned_cols=146 Identities=12% Similarity=0.039 Sum_probs=83.0
Q ss_pred ceeEEEEEEcCCC--c-EEecCCCCceeecCCCCceE-ECCeEEEEEeeCCCCCCcceEEEEECCC--ceeEEECCCCCC
Q 017755 168 DYLEVIIYSLKAD--T-WRRTREFPYYILDDRCNGVF-IAGALHWLAARGSVRTGQNMILAFDLKS--EKFYEVQQPHGM 241 (366)
Q Consensus 168 ~~~~~~vyss~~~--~-W~~~~~~p~~~~~~~~~~v~-~~G~lyw~~~~~~~~~~~~~i~~fD~~~--e~~~~i~~P~~~ 241 (366)
....+.+++..++ . |+.+..-..... ..+. -++.+|+....+. ....|...|+.+ ++|+.+- |...
T Consensus 292 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~----~~~~~dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~l~-~~~~ 363 (741)
T 1yr2_A 292 PVNTVHVARVTNGKIGPVTALIPDLKAQW----DFVDGVGDQLWFVSGDGA---PLKKIVRVDLSGSTPRFDTVV-PESK 363 (741)
T ss_dssp SCCEEEEEEEETTEECCCEEEECSSSSCE----EEEEEETTEEEEEECTTC---TTCEEEEEECSSSSCEEEEEE-CCCS
T ss_pred CcceEEEEECCCCCCcccEEecCCCCceE----EEEeccCCEEEEEECCCC---CCCEEEEEeCCCCccccEEEe-cCCC
Confidence 3456777777766 6 777653211110 1222 3456777665432 125799999988 5787653 3322
Q ss_pred CCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC----
Q 017755 242 KGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS---- 317 (366)
Q Consensus 242 ~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~---- 317 (366)
. .-..+...++.|.+...... ...||+++-.+ . ....+..... .....+.+.++|+.+++....
T Consensus 364 ~--~l~~~~~~~~~lv~~~~~dg--~~~l~~~~~~g--~---~~~~l~~~~~---~~v~~~~~s~d~~~l~~~~ss~~~P 431 (741)
T 1yr2_A 364 D--NLESVGIAGNRLFASYIHDA--KSQVLAFDLDG--K---PAGAVSLPGI---GSASGLSGRPGDRHAYLSFSSFTQP 431 (741)
T ss_dssp S--EEEEEEEEBTEEEEEEEETT--EEEEEEEETTS--C---EEEECBCSSS---CEEEEEECCBTCSCEEEEEEETTEE
T ss_pred C--eEEEEEEECCEEEEEEEECC--EEEEEEEeCCC--C---ceeeccCCCC---eEEEEeecCCCCCEEEEEEcCCCCC
Confidence 1 12233444788877766555 67889887422 1 3344543211 124445566777767765432
Q ss_pred CeEEEEECCCCcEEEE
Q 017755 318 RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 318 ~~l~~ydl~t~~~~~v 333 (366)
..++.||+++++.+.+
T Consensus 432 ~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 432 ATVLALDPATAKTTPW 447 (741)
T ss_dssp EEEEEEETTTTEEEEC
T ss_pred CEEEEEECCCCcEEEE
Confidence 3599999999886554
No 208
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=58.06 E-value=1.3e+02 Score=28.56 Aligned_cols=189 Identities=10% Similarity=-0.023 Sum_probs=96.5
Q ss_pred ceEEEEcCCC------cceEecC-CCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEeccc---ceeEEEEEEcC-C
Q 017755 111 LGMSVFNPTT------KKFKLFP-QFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKV---DYLEVIIYSLK-A 179 (366)
Q Consensus 111 ~~~~V~NP~t------~~~~~lP-~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~---~~~~~~vyss~-~ 179 (366)
..++++|..+ ++...|. .... ....+.+.|. +++ ++....+... ....+.+++.. +
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~~~~SpD-G~~-la~~~~~~~~~~~~~~~i~~~d~~~~ 227 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR-----------FVTGPRLSPD-GRQ-AVWLAWDHPRMPWEGTELKTARVTED 227 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS-----------EECCCEECTT-SSE-EEEEEECTTCCTTTCEEEEEEEECTT
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC-----------cccCceECCC-CCE-EEEEECCCCCCCCCCcEEEEEEECCC
Confidence 4789999998 7777665 3211 1112334443 222 2222222111 23678888888 5
Q ss_pred C---cEEecCCC-CceeecCCCCce-EECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCC-Ce---eeEE
Q 017755 180 D---TWRRTREF-PYYILDDRCNGV-FIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKG-GF---CSQV 249 (366)
Q Consensus 180 ~---~W~~~~~~-p~~~~~~~~~~v-~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~-~~---~~~l 249 (366)
+ ..+.+..- .... .... .-+|++|+....+. ...|..+|+.+.++..+ ........ .+ ...+
T Consensus 228 g~~~~~~~l~~~~~~~~----~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~ 299 (662)
T 3azo_A 228 GRFADTRTLLGGPEEAI----AQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWF 299 (662)
T ss_dssp SCEEEEEEEEEETTBCE----EEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSE
T ss_pred CcccccEEeCCCCCceE----cceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceE
Confidence 6 33333211 0000 0112 23788887765432 24799999988777655 22211110 00 1123
Q ss_pred EEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CC---eEEEEE
Q 017755 250 GVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SR---CLHWYN 324 (366)
Q Consensus 250 ~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~---~l~~yd 324 (366)
... +|++.+.... . ...||.++..+ .. ...+.... + ....+. ..+|+.+++... .. .++.+|
T Consensus 300 ~~~~~~~~~~~~~~-~--~~~l~~~d~~~--~~---~~~l~~~~--~--~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 300 APLANGLIAVVHGK-G--AAVLGILDPES--GE---LVDAAGPW--T--EWAATL-TVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp EECTTSCEEEEEBS-S--SCEEEEEETTT--TE---EEECCSSC--C--EEEEEE-EEETTEEEEEEEETTEEEEEEEEE
T ss_pred eEeCCCEEEEEEEc-C--ccEEEEEECCC--Cc---EEEecCCC--C--eEEEEE-ecCCCEEEEEEcCCCCCCEEEEEE
Confidence 333 5777666654 3 78999998532 22 23333221 0 122221 445665665542 22 489999
Q ss_pred CCCCcEEEE
Q 017755 325 LKDHKQDVI 333 (366)
Q Consensus 325 l~t~~~~~v 333 (366)
+++++.+.+
T Consensus 367 ~~~g~~~~l 375 (662)
T 3azo_A 367 TVTGRARTI 375 (662)
T ss_dssp TTTCCEEEE
T ss_pred CCCCceEEe
Confidence 999998777
No 209
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=57.18 E-value=1e+02 Score=27.18 Aligned_cols=107 Identities=8% Similarity=0.098 Sum_probs=57.3
Q ss_pred eEEEEECCCcee-----EEECCCCCCCC--------CeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEE
Q 017755 221 MILAFDLKSEKF-----YEVQQPHGMKG--------GFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLC 286 (366)
Q Consensus 221 ~i~~fD~~~e~~-----~~i~~P~~~~~--------~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~ 286 (366)
.|..+|+.+.+. ..+..+..... .....+.-. +|++.+.... . .+.||-+...+. -....
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~--~v~iwd~~~~~~---~~~~~ 323 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L--SVKVWDLNMENR---PVETY 323 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S--EEEEEETTCCSS---CSCCE
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C--eEEEEeCCCCcc---cccee
Confidence 799999988764 55555433100 012223222 4666555544 3 899999874211 11111
Q ss_pred EecCCCCCCc-------c---eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEEE
Q 017755 287 SFSKMLHETC-------Y---YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 287 ~i~~~~~~~~-------~---~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v~ 334 (366)
... ...... . ....+++.++|..++....++.+.+||+++++...+.
T Consensus 324 ~~~-~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 324 QVH-EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp ESC-GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEE
T ss_pred ecc-ccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeee
Confidence 111 000000 0 0112678889986766666778999999999876553
No 210
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=56.97 E-value=1.4e+02 Score=28.62 Aligned_cols=195 Identities=12% Similarity=0.083 Sum_probs=99.1
Q ss_pred EecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEE
Q 017755 97 IGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIY 175 (366)
Q Consensus 97 ~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vy 175 (366)
.+..+|.|..++ ....++.+++.......+-.... ....++++|...++-.+. + .....+++.
T Consensus 356 ~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~----------~~p~GlAvD~~~~~lY~t----D--~~~~~I~v~ 419 (619)
T 3s94_A 356 YDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQI----------AHPDGIAVDWVARNLYWT----D--TGTDRIEVT 419 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC----------SCCCEEEEETTTTEEEEE----E--TTTTEEEEE
T ss_pred EEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCC----------CCcCceEEecccCcEEEE----e--CCCCcEEEE
Confidence 345567776665 35567777776644333322211 123477888765542221 1 234567888
Q ss_pred EcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE
Q 017755 176 SLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL 252 (366)
Q Consensus 176 ss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~ 252 (366)
++.+..-+.+..- . .....++.+ +|.|||...... ..|..+++....-..+- ..... .--.|+..
T Consensus 420 ~~~G~~~~~l~~~--~--l~~P~~iavdp~~G~ly~tD~g~~-----~~I~r~~~dG~~~~~l~-~~~l~--~P~GlalD 487 (619)
T 3s94_A 420 RLNGTMRKILISE--D--LEEPRAIVLDPMVGYMYWTDWGEI-----PKIERAALDGSDRVVLV-NTSLG--WPNGLALD 487 (619)
T ss_dssp ETTSCSCEEEECT--T--CCSEEEEEEETTTTEEEEEECSSS-----CEEEEEETTSCSCEEEE-CSSCS--CEEEEEEE
T ss_pred eCCCCeEEEEEEC--C--CCCeeeEEEEcCCCcEEEecCCCC-----CEEEEEccCCCccEEEE-eCCCC--CCeeeEEc
Confidence 8765533333210 0 011124544 599999875432 37888888754333221 11111 11234444
Q ss_pred --CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCc
Q 017755 253 --RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHK 329 (366)
Q Consensus 253 --~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~ 329 (366)
+++||++..... .|+..+-.+. . .+ .+....+ .+|+++.-.++.||+.... ..+...|..++.
T Consensus 488 ~~~~~LY~aD~~~~----~I~~~~~dG~-~--~~--~~~~~~l-----~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 488 YDEGKIYWGDAKTD----KIEVMNTDGT-G--RR--VLVEDKI-----PHIFGFTLLGDYVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp TTTTEEEEEETTTT----EEEEEESSSC-C--CE--EEEECCC-----CSSCCEEEETTEEEEECTTSSCEEEEESSSCC
T ss_pred ccCCEEEEEECCCC----EEEEEecCCC-c--eE--EEeccCC-----CCcEEEEEECCEEEEeecCCCeEEEEEcCCCc
Confidence 689999876543 4555553222 1 11 1111111 2233333334568887644 349999999985
Q ss_pred EEEE
Q 017755 330 QDVI 333 (366)
Q Consensus 330 ~~~v 333 (366)
.+.+
T Consensus 554 ~~~~ 557 (619)
T 3s94_A 554 REVI 557 (619)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5443
No 211
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=56.88 E-value=91 Score=29.62 Aligned_cols=122 Identities=8% Similarity=0.078 Sum_probs=62.1
Q ss_pred CceEECCeEEEEEeeCCCCCCcceEEEEECCC--ceeEEE-CCCCCCC---CCeeeEEEEECCEEEEEEecCCCCeEEEE
Q 017755 198 NGVFIAGALHWLAARGSVRTGQNMILAFDLKS--EKFYEV-QQPHGMK---GGFCSQVGVLRGCLWINSYYHDEPRCDIW 271 (366)
Q Consensus 198 ~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~--e~~~~i-~~P~~~~---~~~~~~l~~~~G~L~~v~~~~~~~~l~iW 271 (366)
.+++.+|.+|...... .+.++|.++ +.|+.- ..|.... +.....++..+|++++.... . .|.
T Consensus 63 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d-g----~l~ 130 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS-------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD-A----SVV 130 (582)
T ss_dssp CCEEETTEEEEEETTT-------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT-T----EEE
T ss_pred ccEEECCEEEEEcCCC-------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC-C----EEE
Confidence 4789999999877543 599999975 457653 3332110 00112334466777665432 1 344
Q ss_pred EEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEe--CCC-eEEEEEc------CCeEEEEECCCCcEEEE
Q 017755 272 VMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSK--DGD-KALIYQH------SRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 272 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~--~g~-~i~l~~~------~~~l~~ydl~t~~~~~v 333 (366)
.++-...+..|.... ............|+.... +|+ .|++... +..++.||.+|++....
T Consensus 131 AlD~~TG~~~W~~~~--~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 131 ALNKNTGKVVWKKKF--ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp EEESSSCCEEEEEEC--SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred EEECCCCCEEeeecC--CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 444322244565321 110000000123333322 233 4555432 34699999999997654
No 212
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=56.15 E-value=1e+02 Score=26.74 Aligned_cols=119 Identities=13% Similarity=0.073 Sum_probs=61.7
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECC-CceeEE---ECCCC-CCCCCeeeEEEEE-CCE-EEEEEecCCCCeEEEEEEee
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLK-SEKFYE---VQQPH-GMKGGFCSQVGVL-RGC-LWINSYYHDEPRCDIWVMKE 275 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~-~e~~~~---i~~P~-~~~~~~~~~l~~~-~G~-L~~v~~~~~~~~l~iW~l~~ 275 (366)
+|+..+....+. ..|..||+. +.+... +..|. .. .-..+... +|+ |++..... +.+.+|.++.
T Consensus 155 dG~~l~~~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~~g~---~p~~~~~spdg~~l~v~~~~~--~~v~v~~~~~ 224 (365)
T 1jof_A 155 TETYLYSADLTA-----NKLWTHRKLASGEVELVGSVDAPDPGD---HPRWVAMHPTGNYLYALMEAG--NRICEYVIDP 224 (365)
T ss_dssp TSSEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECSSTTC---CEEEEEECTTSSEEEEEETTT--TEEEEEEECT
T ss_pred CCCEEEEEcCCC-----CEEEEEEECCCCCEEEeeeEecCCCCC---CCCEeEECCCCCEEEEEECCC--CeEEEEEEeC
Confidence 576444443322 478889987 666543 34442 21 12233333 464 44443322 3799998874
Q ss_pred cCCCCCeeE-EEEecCCC--CCCcc-------eeEEEE-EEeCCCeEEEEEcC-C-----eEEEEECC-CCcEEEE
Q 017755 276 YGSQQSWSK-LCSFSKML--HETCY-------YTEAFA-FSKDGDKALIYQHS-R-----CLHWYNLK-DHKQDVI 333 (366)
Q Consensus 276 ~~~~~~W~~-~~~i~~~~--~~~~~-------~~~~~~-~~~~g~~i~l~~~~-~-----~l~~ydl~-t~~~~~v 333 (366)
. ...... ...+.... ..+.. ...-++ +.++|+.+++.... . .+.+|+++ +++++.+
T Consensus 225 ~--~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~ 298 (365)
T 1jof_A 225 A--THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQ 298 (365)
T ss_dssp T--TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEE
T ss_pred C--CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEe
Confidence 2 123322 12232111 11100 234466 88999977765432 2 69999986 7777754
No 213
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=55.63 E-value=90 Score=26.05 Aligned_cols=181 Identities=8% Similarity=-0.005 Sum_probs=85.0
Q ss_pred eecCceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEe-
Q 017755 107 FNRRLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRR- 184 (366)
Q Consensus 107 ~~~~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~- 184 (366)
...++.+.+||..+++... ++... .....+.+.|.. .+ +.... ..-.+.+|+.+++.-..
T Consensus 125 ~~~d~~i~iwd~~~~~~~~~~~~~~-----------~~v~~~~~~~~~-~~--l~~~~----~d~~i~~wd~~~~~~~~~ 186 (312)
T 4ery_A 125 GSFDESVRIWDVKTGKCLKTLPAHS-----------DPVSAVHFNRDG-SL--IVSSS----YDGLCRIWDTASGQCLKT 186 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCS-----------SCEEEEEECTTS-SE--EEEEE----TTSCEEEEETTTCCEEEE
T ss_pred EeCCCcEEEEECCCCEEEEEecCCC-----------CcEEEEEEcCCC-CE--EEEEe----CCCcEEEEECCCCceeeE
Confidence 3346678889888876543 32211 112345555532 22 22221 23357788887764322
Q ss_pred cC-CCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECCCCCCCCCeeeEEEEECCEEEEEEec
Q 017755 185 TR-EFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQPHGMKGGFCSQVGVLRGCLWINSYY 262 (366)
Q Consensus 185 ~~-~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~P~~~~~~~~~~l~~~~G~L~~v~~~ 262 (366)
+. .-...... -...-+|.....+..+ ..|..+|+.+.+... +.................+|.+.+....
T Consensus 187 ~~~~~~~~~~~---~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 257 (312)
T 4ery_A 187 LIDDDNPPVSF---VKFSPNGKYILAATLD------NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 257 (312)
T ss_dssp ECCSSCCCEEE---EEECTTSSEEEEEETT------TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCT
T ss_pred EeccCCCceEE---EEECCCCCEEEEEcCC------CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECC
Confidence 11 10000000 0111245444444433 378999998876533 3332221111112222234555444443
Q ss_pred CCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEE--cCCeEEEEECC
Q 017755 263 HDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQ--HSRCLHWYNLK 326 (366)
Q Consensus 263 ~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~--~~~~l~~ydl~ 326 (366)
.. .+.+|-++.. ..+..+....- ...-+++++++..++... .++.+.+|+.+
T Consensus 258 dg--~i~vwd~~~~------~~~~~~~~h~~----~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 258 DN--LVYIWNLQTK------EIVQKLQGHTD----VVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TS--CEEEEETTTC------CEEEEECCCSS----CEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CC--EEEEEECCCc------hhhhhhhccCC----cEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 33 7999988742 12333332111 244567788888554443 24557777754
No 214
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=54.97 E-value=95 Score=26.13 Aligned_cols=29 Identities=24% Similarity=0.036 Sum_probs=21.6
Q ss_pred EEEEe-CCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 302 FAFSK-DGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 302 ~~~~~-~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
+++.+ +|+.+++. +..+..||+++++...
T Consensus 260 ~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 260 GLRSPKDPNQIYGV--LNRLAKYDLKQRKLIK 289 (349)
T ss_dssp EEECSSCTTEEEEE--ESEEEEEETTTTEEEE
T ss_pred eEecCCCCCEEEEE--cCeEEEEECccCeEEE
Confidence 45567 88867666 5569999999988643
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=54.95 E-value=44 Score=32.57 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=60.6
Q ss_pred CceEECCeEEEEEeeCCCCCCcceEEEEECCC--ceeEEE-CCCCC-----CCCCeeeEEEEECCEEEEEEecCCCCeEE
Q 017755 198 NGVFIAGALHWLAARGSVRTGQNMILAFDLKS--EKFYEV-QQPHG-----MKGGFCSQVGVLRGCLWINSYYHDEPRCD 269 (366)
Q Consensus 198 ~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~--e~~~~i-~~P~~-----~~~~~~~~l~~~~G~L~~v~~~~~~~~l~ 269 (366)
.+++.+|.+|...... .+.++|..+ +.|+.- ..+.. ..+......+..+|++++.... . .
T Consensus 65 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d-g--~-- 132 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPFS-------VVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD-G--R-- 132 (689)
T ss_dssp CCEEETTEEEEECGGG-------CEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-S--E--
T ss_pred cCEEECCEEEEEcCCC-------eEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC-C--E--
Confidence 4788999999977643 699999875 456642 22211 0011122344567777665432 1 2
Q ss_pred EEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEEEE
Q 017755 270 IWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 270 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~~v 333 (366)
|..++-...+..|........... ......|+.. +| .|++... +..++.||.+|++...-
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~-~~~~~sP~v~--~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRS-YTITGAPRVV--NG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSC-CBCCSCCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCCCC-ccccCCcEEE--CC-EEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 333432222445654321011000 0001233322 34 3666432 34699999999996543
No 216
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=54.75 E-value=1.5e+02 Score=28.39 Aligned_cols=95 Identities=19% Similarity=0.225 Sum_probs=56.7
Q ss_pred ceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc
Q 017755 220 NMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY 297 (366)
Q Consensus 220 ~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 297 (366)
..|..+|+.+.+.... .... .....+... +|++.+...... .+.||-+... ..++.+....
T Consensus 541 ~~v~vwd~~~~~~~~~~~~h~----~~v~~v~~spdg~~l~sg~~Dg--~i~iwd~~~~------~~~~~~~~~~----- 603 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTLAGHT----GYVSTVAVSPDGSLCASGGKDG--VVLLWDLAEG------KKLYSLEANS----- 603 (694)
T ss_dssp SCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSEEEEEETTS--BCEEEETTTT------EEEECCBCSS-----
T ss_pred CeEEEEECCCCcEEEEEcCCC----CCEEEEEEeCCCCEEEEEeCCC--eEEEEECCCC------ceEEEecCCC-----
Confidence 3788899987665432 2211 112333333 466665555444 7999988641 1233333222
Q ss_pred eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 298 YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
....+++.+++. ++....+..+.+||+++++...
T Consensus 604 ~v~~~~~sp~~~-~l~~~~~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 604 VIHALCFSPNRY-WLCAATEHGIKIWDLESKSIVE 637 (694)
T ss_dssp CEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEE
T ss_pred cEEEEEEcCCCc-EEEEEcCCCEEEEECCCCCChh
Confidence 355678888887 5555556669999999987643
No 217
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=53.46 E-value=1.3e+02 Score=27.22 Aligned_cols=113 Identities=12% Similarity=0.186 Sum_probs=61.1
Q ss_pred CceEEC-----CeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEE
Q 017755 198 NGVFIA-----GALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIW 271 (366)
Q Consensus 198 ~~v~~~-----G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW 271 (366)
.++.++ |.|||.... ..|..+|+.+.+.+.+..+.. .-..++.. +|.|++.........-.+.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~-------~~I~~id~~~g~v~~~~~~~~----~P~giavd~dG~lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR-------DAFRHVDFVNQYVDIKTTNIG----QCADVNFTLNGDMVVVDDQSSDTNTGIY 210 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT-------SCEEEEETTTTEEEEECCCCS----CEEEEEECTTCCEEEEECCSCTTSEEEE
T ss_pred ceEEEccccCCCEEEEEeCC-------CCEEEEECCCCEEEEeecCCC----CccEEEECCCCCEEEEcCCCCcccceEE
Confidence 366666 899997654 279999998888877643221 12233333 5778777753321123333
Q ss_pred EEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEe-CCCeEEEEEcC-CeEEEEECCCCcE
Q 017755 272 VMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSK-DGDKALIYQHS-RCLHWYNLKDHKQ 330 (366)
Q Consensus 272 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~-~g~~i~l~~~~-~~l~~ydl~t~~~ 330 (366)
.+... ..|.....+.... ...-+++.+ +|. +++.... ..+..+|+++++.
T Consensus 211 ~~~~~---~~~~~~~~~~~~~-----~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 211 LFTRA---SGFTERLSLCNAR-----GAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EECGG---GTTCCEEEEEECS-----SBCCCEECTTTCC-EEECBTTCSEEEEECTTTCCE
T ss_pred EEECC---CCeeccccccccC-----CCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCeE
Confidence 33322 2232111121111 122256666 555 7766533 4588888887776
No 218
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=52.66 E-value=1.1e+02 Score=26.24 Aligned_cols=112 Identities=13% Similarity=0.130 Sum_probs=62.6
Q ss_pred ECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE--CCEEEEEEecCCCCeEEEEEEeecCCC
Q 017755 202 IAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQ 279 (366)
Q Consensus 202 ~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~ 279 (366)
.+|.+||..... ..|..+|+....-..+.. .... .-..+++. +|.|+....... -.|++++..+.
T Consensus 89 ~~g~ly~~d~~~------~~I~~~~~dG~~~~~l~~-~~~~--~P~giavdp~~g~ly~td~~~~---~~I~r~~~dG~- 155 (318)
T 3sov_A 89 LGEKLYWTDSET------NRIEVSNLDGSLRKVLFW-QELD--QPRAIALDPSSGFMYWTDWGEV---PKIERAGMDGS- 155 (318)
T ss_dssp TTTEEEEEETTT------TEEEEEETTSCSCEEEEC-SSCS--SEEEEEEEGGGTEEEEEECSSS---CEEEEEETTSC-
T ss_pred CCCeEEEEECCC------CEEEEEECCCCcEEEEEe-CCCC--CccEEEEeCCCCEEEEEecCCC---CEEEEEEcCCC-
Confidence 378999987654 489999998654433311 1111 12334443 588888764322 35666654321
Q ss_pred CCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcEEEE
Q 017755 280 QSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 280 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~~~v 333 (366)
-.+.. +. ..+ ....-+++.++++.||+.... ..+..+|++.+..+.+
T Consensus 156 --~~~~~-~~-~~l---~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 156 --SRFII-IN-SEI---YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp --SCEEE-EC-SSC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred --CeEEE-EE-CCC---CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 11111 11 111 134557777766768887643 4589999876655554
No 219
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=52.63 E-value=1e+02 Score=25.85 Aligned_cols=72 Identities=8% Similarity=0.033 Sum_probs=44.9
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCC-eEEEEEcCCeEEEEEC-CCCcE
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGD-KALIYQHSRCLHWYNL-KDHKQ 330 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~-~i~l~~~~~~l~~ydl-~t~~~ 330 (366)
+|.+.++..... .+.||.++... ..-.......... ...-+.+.++|. .++....++.+.+||+ ++++.
T Consensus 22 ~~~~l~~~~~d~--~v~iw~~~~~~--~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~ 92 (342)
T 1yfq_A 22 SKSLLLITSWDG--SLTVYKFDIQA--KNVDLLQSLRYKH-----PLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF 92 (342)
T ss_dssp GGTEEEEEETTS--EEEEEEEETTT--TEEEEEEEEECSS-----CEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE
T ss_pred CCCEEEEEcCCC--eEEEEEeCCCC--ccccceeeeecCC-----ceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce
Confidence 455544444333 79999998532 1111122122211 355577888888 7888877778999999 99887
Q ss_pred EEE
Q 017755 331 DVI 333 (366)
Q Consensus 331 ~~v 333 (366)
..+
T Consensus 93 ~~~ 95 (342)
T 1yfq_A 93 QAL 95 (342)
T ss_dssp EEC
T ss_pred Eec
Confidence 555
No 220
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=52.61 E-value=44 Score=24.39 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=29.2
Q ss_pred CceEEEEcCCCc-ceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEE
Q 017755 110 RLGMSVFNPTTK-KFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRII 162 (366)
Q Consensus 110 ~~~~~V~NP~t~-~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 162 (366)
.-+++.+||.|+ +|+..-... ....+-+|+..+.|+|+.+.
T Consensus 10 rA~V~~~D~~tk~~W~p~g~~~------------~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 10 RAHVFQIDPNTKKNWVPTSKHA------------VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEEECTTTSCSEEESCSSC------------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCCceEeCCCCc------------eEEEEEEcCCCCEEEEEEcc
Confidence 347889999997 886643221 24457778888889999864
No 221
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=52.47 E-value=1.3e+02 Score=27.06 Aligned_cols=110 Identities=8% Similarity=0.095 Sum_probs=61.9
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCE-EEEEEecCCC-CeEEEEEEeecCCC
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGC-LWINSYYHDE-PRCDIWVMKEYGSQ 279 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~-L~~v~~~~~~-~~l~iW~l~~~~~~ 279 (366)
+|.||+.... ..|..||+.+.+.+.+..+.. .-..++.. +|+ |++....... ....+|...+
T Consensus 149 ~g~Lyv~d~~-------~~I~~id~~~~~v~~~~~~~~----~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~---- 213 (430)
T 3tc9_A 149 HNHLYLVGEQ-------HPTRLIDFEKEYVSTVYSGLS----KVRTICWTHEADSMIITNDQNNNDRPNNYILTRE---- 213 (430)
T ss_dssp EEEEEEEEBT-------EEEEEEETTTTEEEEEECCCS----CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG----
T ss_pred CCeEEEEeCC-------CcEEEEECCCCEEEEEecCCC----CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC----
Confidence 3788887654 379999999988776632111 12234433 455 7777764332 1234444433
Q ss_pred CCeeEEEEecCCCCCCcceeEEEEEEe-CCCeEEEEEc-CCeEEEEECCCCcEEEE
Q 017755 280 QSWSKLCSFSKMLHETCYYTEAFAFSK-DGDKALIYQH-SRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 280 ~~W~~~~~i~~~~~~~~~~~~~~~~~~-~g~~i~l~~~-~~~l~~ydl~t~~~~~v 333 (366)
..|.....+.... ...-+++.+ +|. ||+... ..++..||++++....+
T Consensus 214 g~~~~~~~l~~~~-----~p~giavdp~~g~-lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 214 SGFKVITELTKGQ-----NCNGAETHPINGE-LYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp GTSCSEEEEEECS-----SCCCEEECTTTCC-EEEEETTTTEEEEEETTTTEEEEE
T ss_pred CceeeeeeeccCC-----CceEEEEeCCCCE-EEEEECCCCEEEEEECCCCcEEEE
Confidence 2343222222111 133366777 555 777653 35699999998877443
No 222
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.10 E-value=1.2e+02 Score=26.23 Aligned_cols=200 Identities=12% Similarity=0.045 Sum_probs=92.0
Q ss_pred CceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEec-ccceeEEEEEEcCCCcEEecCCC
Q 017755 110 RLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSY-KVDYLEVIIYSLKADTWRRTREF 188 (366)
Q Consensus 110 ~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~-~~~~~~~~vyss~~~~W~~~~~~ 188 (366)
...++++|+.+++...+..... . ...+.+.|..+. +++...... ......+.+++..++.++.+..-
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~---------~--~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~ 234 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTA---------W--LGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH 234 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESS---------C--EEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTSCCCEESSCC
T ss_pred cceEEEEECCCCcEEeeccCCc---------c--cccceECCCCCC-EEEEEecCCCCCCCceEEEEECCCCceeEeecc
Confidence 3478899999988766643211 1 112334442122 232222111 01114667778877777766531
Q ss_pred -CceeecCCCCceEECCe-EEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEE-CCEEEEEEecC-
Q 017755 189 -PYYILDDRCNGVFIAGA-LHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVL-RGCLWINSYYH- 263 (366)
Q Consensus 189 -p~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~-~G~L~~v~~~~- 263 (366)
+.... ......-+|. +++....... ....|..+|+.+.+...+ ..|. .. ....- +|++.+.....
T Consensus 235 ~~~~~~--~~~~~spdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~-----~~-~~~s~~dg~~l~~~~~~~ 304 (396)
T 3c5m_A 235 AEGESC--THEFWIPDGSAMAYVSYFKGQ--TDRVIYKANPETLENEEVMVMPP-----CS-HLMSNFDGSLMVGDGCDA 304 (396)
T ss_dssp CTTEEE--EEEEECTTSSCEEEEEEETTT--CCEEEEEECTTTCCEEEEEECCS-----EE-EEEECSSSSEEEEEECCC
T ss_pred CCCccc--cceEECCCCCEEEEEecCCCC--ccceEEEEECCCCCeEEeeeCCC-----CC-CCccCCCCceEEEecCCc
Confidence 11110 0001222565 6666554321 112499999988776655 3442 12 22223 67755543211
Q ss_pred -----------CCCeEEEEEEeecCCCCCeeEEEEecCCC--CCCc-c-eeEEEEEEeCCCeEEEEEcC---CeEEEEEC
Q 017755 264 -----------DEPRCDIWVMKEYGSQQSWSKLCSFSKML--HETC-Y-YTEAFAFSKDGDKALIYQHS---RCLHWYNL 325 (366)
Q Consensus 264 -----------~~~~l~iW~l~~~~~~~~W~~~~~i~~~~--~~~~-~-~~~~~~~~~~g~~i~l~~~~---~~l~~ydl 325 (366)
....-.||.++-.. ....++..-.... +... . ......+.++|+.|++.... ..++.+|+
T Consensus 305 p~~~~~~~~~~~~~~~~i~~~d~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 305 PVDVADADSYNIENDPFLYVLNTKA--KSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp ----------CCCCCCEEEEEETTT--TBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred ceeeccccccccCCCCcEEEEeccc--CceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence 00123455554321 2233222211100 0000 0 01124567889877776643 24899999
Q ss_pred CCCcEEEE
Q 017755 326 KDHKQDVI 333 (366)
Q Consensus 326 ~t~~~~~v 333 (366)
.++..+.+
T Consensus 383 ~~~~~~~~ 390 (396)
T 3c5m_A 383 PESYKHLE 390 (396)
T ss_dssp CTTCC---
T ss_pred cccccccc
Confidence 88877665
No 223
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=51.57 E-value=1.1e+02 Score=25.76 Aligned_cols=162 Identities=10% Similarity=0.092 Sum_probs=86.5
Q ss_pred eEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCCceeecCCCCce-EECCeEEEEEeeCCCCCCcceEE
Q 017755 145 DGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFPYYILDDRCNGV-FIAGALHWLAARGSVRTGQNMIL 223 (366)
Q Consensus 145 ~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v-~~~G~lyw~~~~~~~~~~~~~i~ 223 (366)
.++.+++. . ++.. . .+......+.+++..+++=.....++...+. .++ ..++.+|...... ..+.
T Consensus 24 ~Gl~~~~d--g-~Lyv-s-tg~~~~s~v~~iD~~tg~v~~~i~l~~~~fg---eGi~~~g~~lyv~t~~~------~~v~ 89 (266)
T 2iwa_A 24 QGLVYAEN--D-TLFE-S-TGLYGRSSVRQVALQTGKVENIHKMDDSYFG---EGLTLLNEKLYQVVWLK------NIGF 89 (266)
T ss_dssp EEEEECST--T-EEEE-E-ECSTTTCEEEEEETTTCCEEEEEECCTTCCE---EEEEEETTEEEEEETTC------SEEE
T ss_pred ccEEEeCC--C-eEEE-E-CCCCCCCEEEEEECCCCCEEEEEecCCCcce---EEEEEeCCEEEEEEecC------CEEE
Confidence 47777764 2 2222 1 1112457789999988753322122221111 133 3456888888755 4899
Q ss_pred EEECCCcee-EEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCc-ceeEE
Q 017755 224 AFDLKSEKF-YEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETC-YYTEA 301 (366)
Q Consensus 224 ~fD~~~e~~-~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~-~~~~~ 301 (366)
++|..+.+- ..++.+ ..+ -..+...+++|++... . =.|++++-. +-..+.+|....-... ....-
T Consensus 90 viD~~t~~v~~~i~~g-~~~---g~glt~Dg~~l~vs~g---s--~~l~viD~~----t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQ-MKD---GWGLATDGKILYGSDG---T--SILYEIDPH----TFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp EEETTTTEEEEEEECC-SSS---CCEEEECSSSEEEECS---S--SEEEEECTT----TCCEEEEEECEETTEECCCEEE
T ss_pred EEECCCCcEEEEEECC-CCC---eEEEEECCCEEEEECC---C--CeEEEEECC----CCcEEEEEEECCCCccccccee
Confidence 999987544 556655 121 2235544567776542 2 167777742 2333444443221000 01222
Q ss_pred EEEEeCCCeEEEEEc-CCeEEEEECCCCcE-EEEEE
Q 017755 302 FAFSKDGDKALIYQH-SRCLHWYNLKDHKQ-DVIEI 335 (366)
Q Consensus 302 ~~~~~~g~~i~l~~~-~~~l~~ydl~t~~~-~~v~~ 335 (366)
+.+. +|. +|.... ...+.+.|++|++. ..|.+
T Consensus 157 le~~-dg~-lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 157 LEYI-NGE-VWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp EEEE-TTE-EEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred EEEE-CCE-EEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 3333 564 887764 34699999999986 45554
No 224
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=51.00 E-value=1.2e+02 Score=26.26 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=54.7
Q ss_pred eEEEEECCCceeE-EECCCCCCC--CCeeeEEEEE-CC-EEEEEEecCC-CCeEEEEEEeecCCCCCeeEEEEecCCCCC
Q 017755 221 MILAFDLKSEKFY-EVQQPHGMK--GGFCSQVGVL-RG-CLWINSYYHD-EPRCDIWVMKEYGSQQSWSKLCSFSKMLHE 294 (366)
Q Consensus 221 ~i~~fD~~~e~~~-~i~~P~~~~--~~~~~~l~~~-~G-~L~~v~~~~~-~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 294 (366)
.|..+|+.+.+.. .+..+.... ......+.-. +| .+.+...... ...+.+|-+..... . +..+.. ...
T Consensus 189 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~----~~~~~~-~~~ 262 (416)
T 2pm9_A 189 FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-P----LQTLNQ-GHQ 262 (416)
T ss_dssp CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-C----SBCCCS-CCS
T ss_pred CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-C----cEEeec-Ccc
Confidence 7999999886653 344442110 1112233333 23 3444444332 22689998875211 1 111110 000
Q ss_pred CcceeEEEEEEe-CCCeEEEEEcCCeEEEEECCCCcEE
Q 017755 295 TCYYTEAFAFSK-DGDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 295 ~~~~~~~~~~~~-~g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
....-+.+.+ ++..++....++.+.+||+++++..
T Consensus 263 --~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 263 --KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp --SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred --CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 0345567777 7776666667778999999988653
No 225
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=49.45 E-value=1.6e+02 Score=27.10 Aligned_cols=96 Identities=10% Similarity=0.130 Sum_probs=53.8
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCccee
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYT 299 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 299 (366)
.|..+|...+....+..+... ...+... +|++.+...... .+.+|.++. + .+..+....- ..
T Consensus 408 ~v~~~~~~~~~~~~~~~~~~~----v~~~~~s~d~~~l~~~~~d~--~v~~w~~~~----~---~~~~~~~~~~----~v 470 (577)
T 2ymu_A 408 TVKLWNRNGQLLQTLTGHSSS----VWGVAFSPDDQTIASASDDK--TVKLWNRNG----Q---LLQTLTGHSS----SV 470 (577)
T ss_dssp EEEEECTTCCEEEEEECCSSC----EEEEEECTTSSEEEEEETTS--EEEEEETTS----C---EEEEEECCSS----CE
T ss_pred EEEEEeCCCCEEEEecCCCCC----eEEEEECCCCCEEEEEcCCC--EEEEEECCC----C---EEEEEcCCCC----CE
Confidence 677788766555554432221 2233333 455544444333 799997532 1 2222222111 34
Q ss_pred EEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 300 EAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 300 ~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
.-+++.++|+.+.....++.+.+||...+..+.+
T Consensus 471 ~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~ 504 (577)
T 2ymu_A 471 RGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 504 (577)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEE
Confidence 5578889998666666777799999766555554
No 226
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=49.45 E-value=2.2e+02 Score=28.64 Aligned_cols=96 Identities=6% Similarity=0.027 Sum_probs=56.9
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeE
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTE 300 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~ 300 (366)
.|..+|..+.+.... ++.. .....+.-..|+ +++....+. .+.||-++.. . .+..+.... ...
T Consensus 40 ~I~lw~~~~~~~~~~-~~~~---~~V~~l~fspg~-~L~S~s~D~-~v~lWd~~~~----~--~~~~~~~~~-----~V~ 102 (902)
T 2oaj_A 40 EVHIYGQQQVEVVIK-LEDR---SAIKEMRFVKGI-YLVVINAKD-TVYVLSLYSQ----K--VLTTVFVPG-----KIT 102 (902)
T ss_dssp EEEEECSTTCEEEEE-CSSC---CCEEEEEEETTT-EEEEEETTC-EEEEEETTTC----S--EEEEEECSS-----CEE
T ss_pred EEEEEeCCCcEEEEE-cCCC---CCEEEEEEcCCC-EEEEEECcC-eEEEEECCCC----c--EEEEEcCCC-----CEE
Confidence 577777776554332 2221 112333333466 334443333 8999988742 1 233333221 355
Q ss_pred EEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 301 AFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 301 ~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
-+.+.++|+.++....++.+.+||+++++....
T Consensus 103 ~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~ 135 (902)
T 2oaj_A 103 SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSF 135 (902)
T ss_dssp EEECCTTCSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 678888999787777777899999999987533
No 227
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=48.18 E-value=1.7e+02 Score=26.96 Aligned_cols=96 Identities=10% Similarity=0.154 Sum_probs=55.0
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCccee
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYT 299 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 299 (366)
.|..+|...+....+...... ...+... +|++.+...... .+.||-.+. ..+..+....- ..
T Consensus 449 ~v~~w~~~~~~~~~~~~~~~~----v~~~~~spd~~~las~~~d~--~i~iw~~~~-------~~~~~~~~h~~----~v 511 (577)
T 2ymu_A 449 TVKLWNRNGQLLQTLTGHSSS----VRGVAFSPDGQTIASASDDK--TVKLWNRNG-------QLLQTLTGHSS----SV 511 (577)
T ss_dssp EEEEEETTSCEEEEEECCSSC----EEEEEECTTSCEEEEEETTS--EEEEEETTS-------CEEEEEECCSS----CE
T ss_pred EEEEEECCCCEEEEEcCCCCC----EEEEEEcCCCCEEEEEeCCC--EEEEEcCCC-------CEEEEEeCCCC----CE
Confidence 678888877666555432221 2223333 466655554433 799997431 12333322111 34
Q ss_pred EEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEE
Q 017755 300 EAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 300 ~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v 333 (366)
.-+++.++|..++-...++.+.+||...+.+..+
T Consensus 512 ~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 512 RGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 545 (577)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEECTTSCEEEEE
T ss_pred EEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEE
Confidence 5578889999666666777899999765544444
No 228
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=47.54 E-value=1.2e+02 Score=24.91 Aligned_cols=197 Identities=10% Similarity=0.056 Sum_probs=100.6
Q ss_pred eEEEecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEE
Q 017755 94 TSVIGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEV 172 (366)
Q Consensus 94 ~~~~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 172 (366)
..+....+|-+.+.+ ....+.++||. ++...++.+.. .....++..|+.. . +... . ...-.+
T Consensus 23 ~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~---------~~~~~~i~~~~~g-~--l~v~-~---~~~~~v 85 (300)
T 2qc5_A 23 YGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP---------DAKVMCLIVSSLG-D--IWFT-E---NGANKI 85 (300)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST---------TCCEEEEEECTTS-C--EEEE-E---TTTTEE
T ss_pred ceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC---------CCcceeEEECCCC-C--EEEE-e---cCCCeE
Confidence 344445567665554 45789999998 77665433211 1123356666532 2 2111 1 122346
Q ss_pred EEEEcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEE
Q 017755 173 IIYSLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVG 250 (366)
Q Consensus 173 ~vyss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~ 250 (366)
..|+.. +.++........ ....++.+ +|.+|+..... ..|..+|.. .+...+.+|.... .-..+.
T Consensus 86 ~~~d~~-g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~~~~~~~--~~~~i~ 152 (300)
T 2qc5_A 86 GKLSKK-GGFTEYPLPQPD---SGPYGITEGLNGDIWFTQLNG------DRIGKLTAD-GTIYEYDLPNKGS--YPAFIT 152 (300)
T ss_dssp EEECTT-SCEEEEECSSTT---CCEEEEEECSTTCEEEEETTT------TEEEEECTT-SCEEEEECSSTTC--CEEEEE
T ss_pred EEECCC-CCeEEecCCCCC---CCCccceECCCCCEEEEccCC------CeEEEECCC-CCEEEccCCCCCC--CceeEE
Confidence 667766 555543211000 01123333 57766554322 379999998 6666665654321 123344
Q ss_pred EE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCC
Q 017755 251 VL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDH 328 (366)
Q Consensus 251 ~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~ 328 (366)
.. +|+|++...... .|+.++. ..+... ..... .. ....-+++.++|. +++.... ..+..||+ ++
T Consensus 153 ~d~~g~l~v~~~~~~----~i~~~~~---~g~~~~-~~~~~-~~---~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g 218 (300)
T 2qc5_A 153 LGSDNALWFTENQNN----SIGRITN---TGKLEE-YPLPT-NA---AAPVGITSGNDGA-LWFVEIMGNKIGRITT-TG 218 (300)
T ss_dssp ECTTSSEEEEETTTT----EEEEECT---TCCEEE-EECSS-TT---CCEEEEEECTTSS-EEEEETTTTEEEEECT-TC
T ss_pred ECCCCCEEEEecCCC----eEEEECC---CCcEEE-eeCCC-CC---CCcceEEECCCCC-EEEEccCCCEEEEEcC-CC
Confidence 43 578877665332 3555553 133432 21111 11 1233455666776 7776643 46999999 66
Q ss_pred cEEEEE
Q 017755 329 KQDVIE 334 (366)
Q Consensus 329 ~~~~v~ 334 (366)
++..+.
T Consensus 219 ~~~~~~ 224 (300)
T 2qc5_A 219 EISEYD 224 (300)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 666553
No 229
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=46.95 E-value=1.3e+02 Score=25.45 Aligned_cols=78 Identities=6% Similarity=0.091 Sum_probs=47.3
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
+|++.+...... .+.||.++.. ...+..+..+....- ...-+.+.++|..++-...++.+.+||..++.++.
T Consensus 118 ~g~~las~s~D~--~v~iwd~~~~--~~~~~~~~~~~~h~~----~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~ 189 (330)
T 2hes_X 118 DGYYLATCSRDK--SVWIWETDES--GEEYECISVLQEHSQ----DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWEC 189 (330)
T ss_dssp TSCEEEEEETTS--CEEEEECCTT--CCCCEEEEEECCCSS----CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCCC--EEEEEeccCC--CCCeEEEEEeccCCC----ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeE
Confidence 455544444333 7999998642 234555544432211 35557778888855555667779999998886665
Q ss_pred EE-EecC
Q 017755 333 IE-IRNE 338 (366)
Q Consensus 333 v~-~~~~ 338 (366)
+. +.+.
T Consensus 190 ~~~~~~h 196 (330)
T 2hes_X 190 VAVLNGH 196 (330)
T ss_dssp EEEECCC
T ss_pred EEEccCC
Confidence 53 3443
No 230
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=46.75 E-value=1.6e+02 Score=26.27 Aligned_cols=204 Identities=9% Similarity=0.102 Sum_probs=102.2
Q ss_pred EEecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEE
Q 017755 96 VIGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVII 174 (366)
Q Consensus 96 ~~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~v 174 (366)
+.-+.+|-|.+.+ ....+.++|+.+++...+...... .. +.+++..+ .++.. .. .....+.+
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~----------~~--ia~~~~g~--~l~~~-d~--~~~~~I~~ 198 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG----------GK--PAVTKDKQ--RVYSI-GW--EGTHTVYV 198 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB----------CB--CEECTTSS--EEEEE-BS--STTCEEEE
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC----------Cc--eeEecCCC--cEEEE-ec--CCCceEEE
Confidence 3334566665554 357899999999887766433211 11 45565433 12221 11 11115666
Q ss_pred EEcCCC-cEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCee-e-
Q 017755 175 YSLKAD-TWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFC-S- 247 (366)
Q Consensus 175 yss~~~-~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~-~- 247 (366)
++..++ ..+.+...+... .....++.+ +|.+|+ .... ..|..+|+.+.....+ ..+........ .
T Consensus 199 ~d~~~~~~~~~~g~~~~~~-~~~p~~iav~p~~g~lyv-~d~~------~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 199 YMKASGWAPTRIGQLGSTF-SGKIGAVALDETEEWLYF-VDSN------KNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp EEGGGTTCEEEEEECCTTS-CSCCCBCEECTTSSEEEE-ECTT------CEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred EEcCCCceeEEeeeccchh-cCCcEEEEEeCCCCeEEE-EECC------CcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 666543 223331111100 011123333 688998 3322 3799999988776555 11111111112 2
Q ss_pred EEEEE--CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCC----------cceeEEEEEEeCCCeEEEEE
Q 017755 248 QVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHET----------CYYTEAFAFSKDGDKALIYQ 315 (366)
Q Consensus 248 ~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~----------~~~~~~~~~~~~g~~i~l~~ 315 (366)
.++.. +|.|++...... .|++++..+ .-..+ .......+ .....-+++.++|+ +++..
T Consensus 271 ~ia~~p~~g~lyv~d~~~~----~I~~~~~~g---~~~~~--~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad 340 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLS----SVYKITPDG---ECEWF--CGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVD 340 (409)
T ss_dssp EEEEETTTTEEEEEETTTT----EEEEECTTC---CEEEE--EECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEE
T ss_pred cEEEeCCCCEEEEEeCCCC----EEEEEecCC---CEEEE--EeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEe
Confidence 45555 588888765433 455554321 11111 11110000 01244467778888 77776
Q ss_pred c--CCeEEEEECCCCcEEEEE
Q 017755 316 H--SRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 316 ~--~~~l~~ydl~t~~~~~v~ 334 (366)
. ...+..+|+.++++..+.
T Consensus 341 ~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 341 GFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp TTTTCEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEECCCCEEEEEe
Confidence 5 346999998888877663
No 231
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=46.66 E-value=1.4e+02 Score=25.49 Aligned_cols=73 Identities=14% Similarity=0.199 Sum_probs=41.9
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeE-EEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEE
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSK-LCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
+|.+.+...... .+.||.+...+....... ...+....- ...-+++.+++..++-...++.+.+||+++++..
T Consensus 38 d~~~l~sgs~D~--~v~iWd~~~~~~~~~~~~~~~~l~~h~~----~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~ 111 (343)
T 2xzm_R 38 DSPVLISGSRDK--TVMIWKLYEEEQNGYFGIPHKALTGHNH----FVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY 111 (343)
T ss_dssp CCCEEEEEETTS--CEEEEEECSSCCSSBSEEEEEEECCCSS----CEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE
T ss_pred CCCEEEEEcCCC--EEEEEECCcCCcccccccccchhccCCC----ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 455544444444 799999875322111111 222211110 3455777888885555566778999999998753
No 232
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=46.18 E-value=1.6e+02 Score=26.22 Aligned_cols=104 Identities=12% Similarity=0.007 Sum_probs=55.1
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCC----C---
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKML----H--- 293 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~----~--- 293 (366)
.|..+|+.+.+....-+..+...-....+. +|++.+...... .+.+|-++.. .- +..+.... +
T Consensus 221 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~~d~--~v~vwd~~~~----~~--~~~~~~~~~~~~~~~~ 290 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFGHKHFVSSICCG--KDYLLLSAGGDD--KIFAWDWKTG----KN--LSTFDYNSLIKPYLND 290 (450)
T ss_dssp CEEEEEESCTTCEEEECCCCSSCEEEEEEC--STTEEEEEESSS--EEEEEETTTC----CE--EEEEECHHHHGGGCCT
T ss_pred cEEEEECCCCceeeeeecCCCCceEEEEEC--CCCEEEEEeCCC--eEEEEECCCC----cE--eeeecchhhhhhhhhh
Confidence 688889886654322121111110122222 676665555444 7999988742 22 22222110 0
Q ss_pred --------------CCcceeEEEEEEeCCCeEEEEE-cCCeEEEEEC--CC-CcEEEEE
Q 017755 294 --------------ETCYYTEAFAFSKDGDKALIYQ-HSRCLHWYNL--KD-HKQDVIE 334 (366)
Q Consensus 294 --------------~~~~~~~~~~~~~~g~~i~l~~-~~~~l~~ydl--~t-~~~~~v~ 334 (366)
.......-+.+.++|..++... .+..+.+||+ .+ ++++.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~ 349 (450)
T 2vdu_B 291 QHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQ 349 (450)
T ss_dssp TSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEE
T ss_pred cccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeecc
Confidence 0001244567778898777776 5667999999 44 4455553
No 233
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=45.57 E-value=2.1e+02 Score=27.32 Aligned_cols=153 Identities=10% Similarity=-0.024 Sum_probs=77.1
Q ss_pred ceeEEEEEEcCCCcEEecCCCC-ceeecCCCCceEECCe-EEEEEeeCCCCCCcceEEEEECCCc-eeEEECCCCCC---
Q 017755 168 DYLEVIIYSLKADTWRRTREFP-YYILDDRCNGVFIAGA-LHWLAARGSVRTGQNMILAFDLKSE-KFYEVQQPHGM--- 241 (366)
Q Consensus 168 ~~~~~~vyss~~~~W~~~~~~p-~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~i~~fD~~~e-~~~~i~~P~~~--- 241 (366)
....+.+++..++.-+.+.... ..... ..-...-+|+ ++....... .....|..+|+.+. +...+......
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~~~~~spdg~~l~~~~~~~~--~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFL-TNLSWSPDENILYVAEVNRA--QNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEE-EEEEECTTSSEEEEEEECTT--SCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeE-eeEEEECCCCEEEEEEeCCC--CCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 3467888888887765543211 00000 0001122565 444333221 11247899999987 66554211111
Q ss_pred CCCeeeEEEE-ECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC---
Q 017755 242 KGGFCSQVGV-LRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS--- 317 (366)
Q Consensus 242 ~~~~~~~l~~-~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~--- 317 (366)
.......... .+|++.++..... ...||.++..+ . .+..+..... ....++++.++|+.+++...+
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g--~~~l~~~~~~~--~---~~~~l~~~~~---~v~~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDG--WNHLYLYDTTG--R---LIRQVTKGEW---EVTNFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTS--SCEEEEEETTS--C---EEEECCCSSS---CEEEEEEECTTSSEEEEEESSSCT
T ss_pred CccCCceeecCCCCEEEEEEccCC--ccEEEEEECCC--C---EEEecCCCCe---EEEeeeEEcCCCCEEEEEecCCCC
Confidence 0000111111 1677544443332 68999988321 2 2233322211 023447888999878776643
Q ss_pred --CeEEEEECCCCcEEEE
Q 017755 318 --RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 318 --~~l~~ydl~t~~~~~v 333 (366)
..++.+|+++++.+.+
T Consensus 380 ~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 380 LERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp TCBEEEEEETTCCCCEES
T ss_pred ceEEEEEEEcCCCCceec
Confidence 2689999998876655
No 234
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=44.90 E-value=1.5e+02 Score=25.46 Aligned_cols=149 Identities=9% Similarity=0.075 Sum_probs=71.3
Q ss_pred ceeEEEEEEcCCCcEEecCCCCceeecCCCCceE-E-CCe-EEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCC
Q 017755 168 DYLEVIIYSLKADTWRRTREFPYYILDDRCNGVF-I-AGA-LHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGG 244 (366)
Q Consensus 168 ~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~-~-~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~ 244 (366)
....+.+++..++..+.+...+.... .... - +|. +++... +........|..+|+.+.+...+...... .
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~----~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~~~~~--~ 238 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLG----HPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKEHAEG--E 238 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEE----EEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSCCCTT--E
T ss_pred CcceEEEEECCCCcEEeeccCCcccc----cceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeeccCCC--c
Confidence 34567777887777665542111110 1112 1 344 555543 21111113688889987776655321111 0
Q ss_pred eeeEEEEE-CCE-EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEe-CCCeEEEEE------
Q 017755 245 FCSQVGVL-RGC-LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSK-DGDKALIYQ------ 315 (366)
Q Consensus 245 ~~~~l~~~-~G~-L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~-~g~~i~l~~------ 315 (366)
....+.-. +|+ |+++........-.|+.++-. ......+... .. .. ..+.+ +|+.++...
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~--~g~~~~l~~~--~~------~~-~~~s~~dg~~l~~~~~~~p~~ 307 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE--TLENEEVMVM--PP------CS-HLMSNFDGSLMVGDGCDAPVD 307 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT--TCCEEEEEEC--CS------EE-EEEECSSSSEEEEEECCC---
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECC--CCCeEEeeeC--CC------CC-CCccCCCCceEEEecCCccee
Confidence 11122222 454 666655433223224444421 1223322221 11 22 56677 888555532
Q ss_pred ----------cCCeEEEEECCCCcEEEEE
Q 017755 316 ----------HSRCLHWYNLKDHKQDVIE 334 (366)
Q Consensus 316 ----------~~~~l~~ydl~t~~~~~v~ 334 (366)
.+..++.+|+++++.+.+.
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCCEEE
T ss_pred eccccccccCCCCcEEEEecccCceEEcc
Confidence 1246999999999877663
No 235
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=44.68 E-value=1.9e+02 Score=27.23 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=65.9
Q ss_pred ECCeEEEEEeeCCCCCCcceEEEEECCCceeEE-ECC-CCCCCCCeeeEEEEEC-CEEEEEEecCCCCeEEEEEEeecC-
Q 017755 202 IAGALHWLAARGSVRTGQNMILAFDLKSEKFYE-VQQ-PHGMKGGFCSQVGVLR-GCLWINSYYHDEPRCDIWVMKEYG- 277 (366)
Q Consensus 202 ~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~-i~~-P~~~~~~~~~~l~~~~-G~L~~v~~~~~~~~l~iW~l~~~~- 277 (366)
-+|+.++++.... ..|.++|+.+.+... ++. ....+.+.-..+..-+ |.+++.... ..+.+.++-.+...
T Consensus 351 pdgr~~~va~~~s-----n~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~-g~~~Vsvid~~~~~~ 424 (567)
T 1qks_A 351 GSHRYFITAANAR-----NKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHM-GDDSVALIGTDPEGH 424 (567)
T ss_dssp TTSCEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBS-SSSEEEEEECCTTTC
T ss_pred CCCCEEEEEeCCC-----CeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCC-CCCeEEEecCCCCCC
Confidence 3566666665442 489999999887643 344 2222211122233333 556544432 22266666655311
Q ss_pred CCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-------CCeEEEEECCCC
Q 017755 278 SQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-------SRCLHWYNLKDH 328 (366)
Q Consensus 278 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-------~~~l~~ydl~t~ 328 (366)
....|..+.+|....- ....+.+++++..+++... ...+.+||.++.
T Consensus 425 ~~~~~kvv~~i~~~g~----g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 425 PDNAWKILDSFPALGG----GSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp TTTBTSEEEEEECSCS----CCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred ccccCEEEEEEecCCC----CCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 1234988888876532 1122557889987887652 235999999876
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=44.00 E-value=2.3e+02 Score=27.40 Aligned_cols=30 Identities=13% Similarity=-0.018 Sum_probs=21.6
Q ss_pred ceEECCeEEEEEeeCCCCCCcceEEEEECCCc--eeEEE
Q 017755 199 GVFIAGALHWLAARGSVRTGQNMILAFDLKSE--KFYEV 235 (366)
Q Consensus 199 ~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e--~~~~i 235 (366)
+++.+|.+|.-... ..+.++|.++. .|+.-
T Consensus 117 ~~~~~g~v~v~~~d-------g~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 117 VAVWKGKVYVGVLD-------GRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp CEEETTEEEEECTT-------SEEEEEETTTCCEEEEEE
T ss_pred cEEECCEEEEEccC-------CEEEEEECCCCCEeeeec
Confidence 56788898886643 37999999764 46654
No 237
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=43.35 E-value=2.3e+02 Score=27.24 Aligned_cols=58 Identities=14% Similarity=0.092 Sum_probs=32.7
Q ss_pred EEEEEEcCCC--cEEecCCCCcee------ecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCc--eeEEE
Q 017755 171 EVIIYSLKAD--TWRRTREFPYYI------LDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSE--KFYEV 235 (366)
Q Consensus 171 ~~~vyss~~~--~W~~~~~~p~~~------~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e--~~~~i 235 (366)
.+..++..++ .|+.-...+... .......++.+|.+|..... ..+.++|..+. .|+.-
T Consensus 77 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-------g~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 77 RVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD-------GRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp EEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT-------SEEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC-------CEEEEEECCCCCEeeeec
Confidence 3445566554 687643322110 00112356778898876543 37999998754 56653
No 238
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=43.20 E-value=58 Score=25.31 Aligned_cols=40 Identities=15% Similarity=0.302 Sum_probs=28.4
Q ss_pred ceEEEEcCCCc-ceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEE
Q 017755 111 LGMSVFNPTTK-KFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRII 162 (366)
Q Consensus 111 ~~~~V~NP~t~-~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 162 (366)
-+++++||.|+ +|+..-.. .. .+.+-+|+..+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~-----------~~-~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKH-----------AV-TVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSS-----------CE-EEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCC-----------Ce-EEEEEEcCCCCEEEEEEcc
Confidence 47899999997 88654332 11 3455688888889999865
No 239
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=42.91 E-value=1.7e+02 Score=25.43 Aligned_cols=191 Identities=10% Similarity=0.132 Sum_probs=96.2
Q ss_pred cceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCC
Q 017755 101 HGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKAD 180 (366)
Q Consensus 101 nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~ 180 (366)
.+.|++.+ ...+...++...+...+-+.. ....++.+|+..+...+. + ...-.+..++..+.
T Consensus 44 ~~~ll~~~-~~~I~~i~~~g~~~~~~~~~~-----------~~~~~l~~d~~~~~ly~~----D--~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 44 EPVLLFAN-RIDIRQVLPHRSEYTLLLNNL-----------ENAIALDFHHRRELVFWS----D--VTLDRILRANLNGS 105 (349)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCEEEEECSC-----------SCEEEEEEETTTTEEEEE----E--TTTTEEEEEETTSC
T ss_pred CceeEeec-ccceEEEeCCCCeeEEeecCC-----------CceEEEEEeccccEEEEE----e--ccCCceEEEecCCC
Confidence 44444443 334666666665544332211 124577888765432222 1 12335566666655
Q ss_pred cEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE--CCE
Q 017755 181 TWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL--RGC 255 (366)
Q Consensus 181 ~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~--~G~ 255 (366)
.-+.+.... . ....++.+ +|.+||..... ..|.++|+....-..+. ..... .-..+++. +|.
T Consensus 106 ~~~~~~~~~--~--~~p~glavd~~~g~ly~~d~~~------~~I~~~~~dG~~~~~l~-~~~l~--~P~~iavdp~~g~ 172 (349)
T 3v64_C 106 NVEEVVSTG--L--ESPGGLAVDWVHDKLYWTDSGT------SRIEVANLDGAHRKVLL-WQSLE--KPRAIALHPMEGT 172 (349)
T ss_dssp SCEEEECSS--C--SCCCEEEEETTTTEEEEEETTT------TEEEEEETTSCSCEEEE-CTTCS--CEEEEEEETTTTE
T ss_pred CceEEEeCC--C--CCccEEEEecCCCeEEEEcCCC------CeEEEEcCCCCceEEEE-eCCCC--CcceEEEecCcCe
Confidence 433321100 0 01123433 68999987654 48999999865544332 11221 12344444 688
Q ss_pred EEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcEEEE
Q 017755 256 LWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 256 L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~~~v 333 (366)
|+...... .-.|++.+..+. . ...+-...+ ....-+++.++++.+|+.... ..+..+|++....+.+
T Consensus 173 ly~td~~~---~~~I~r~~~dG~-~----~~~~~~~~~---~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~ 240 (349)
T 3v64_C 173 IYWTDWGN---TPRIEASSMDGS-G----RRIIADTHL---FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 240 (349)
T ss_dssp EEEEECSS---SCEEEEEETTSC-S----CEESCCSSC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred EEEeccCC---CCEEEEEeCCCC-C----cEEEEECCC---CCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEE
Confidence 88876543 135666553221 1 111111111 124456777666668887643 4588999876554444
No 240
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=42.82 E-value=1.4e+02 Score=26.35 Aligned_cols=70 Identities=6% Similarity=0.041 Sum_probs=42.8
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
+|.+.+...... .+.+|-++.. ..+..+....... ...-+++.++|..++....++.+.+||+++++...
T Consensus 181 ~~~~l~~~~~d~--~i~iwd~~~~------~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNLS--RVIIFDIRTL------ERLQIIENSPRHG--AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETTS--EEEEEETTTC------CEEEEEECCGGGC--CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCC--eEEEEeCCCC------eeeEEEccCCCCC--ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEE
Confidence 355555555444 7999988642 1233333211111 35557788888866666777779999999877533
No 241
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=42.78 E-value=1.4e+02 Score=24.66 Aligned_cols=36 Identities=3% Similarity=-0.019 Sum_probs=26.8
Q ss_pred eEEEEEEeCCCeEEEEEcCCeEEEEECCCCc-EEEEE
Q 017755 299 TEAFAFSKDGDKALIYQHSRCLHWYNLKDHK-QDVIE 334 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~-~~~v~ 334 (366)
..-+.+.++|+.++-...++.+.+||+++++ ++.+.
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 5557788888866666677779999999864 56654
No 242
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=42.18 E-value=2.8e+02 Score=27.83 Aligned_cols=191 Identities=10% Similarity=0.026 Sum_probs=93.8
Q ss_pred eEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcE
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTW 182 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W 182 (366)
+|.....++.+.|||..+.+....... ......+.|.| ++ .++... ....+.+++..++.-
T Consensus 31 ~lAsgs~Dg~I~lw~~~~~~~~~~~~~-----------~~~V~~l~fsp--g~-~L~S~s-----~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 31 LLAIATVTGEVHIYGQQQVEVVIKLED-----------RSAIKEMRFVK--GI-YLVVIN-----AKDTVYVLSLYSQKV 91 (902)
T ss_dssp EEEEEETTSEEEEECSTTCEEEEECSS-----------CCCEEEEEEET--TT-EEEEEE-----TTCEEEEEETTTCSE
T ss_pred EEEEEeCCCEEEEEeCCCcEEEEEcCC-----------CCCEEEEEEcC--CC-EEEEEE-----CcCeEEEEECCCCcE
Confidence 333334566788898877665433211 11233566666 44 343332 334677788776532
Q ss_pred EecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCC--------CCCCCeeeEEEEE
Q 017755 183 RRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPH--------GMKGGFCSQVGVL 252 (366)
Q Consensus 183 ~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~--------~~~~~~~~~l~~~ 252 (366)
...-..+... ..+.+ +|..-..+..+ ..|..+|+.+.+......|. ..+.+.-..+.-.
T Consensus 92 ~~~~~~~~~V-----~~v~~sp~g~~l~sgs~d------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 92 LTTVFVPGKI-----TSIDTDASLDWMLIGLQN------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp EEEEECSSCE-----EEEECCTTCSEEEEEETT------SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred EEEEcCCCCE-----EEEEECCCCCEEEEEcCC------CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEc
Confidence 1110000000 11111 34433344333 37888999887754332211 1111112233333
Q ss_pred C--CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCC------------CCCc--ceeEEEEEEeCCCeEEEEEc
Q 017755 253 R--GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKML------------HETC--YYTEAFAFSKDGDKALIYQH 316 (366)
Q Consensus 253 ~--G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~------------~~~~--~~~~~~~~~~~g~~i~l~~~ 316 (366)
. +.+.++..... .+ +|-++.. ..+..+.... .... ....-+++.++|..++-...
T Consensus 161 p~~~~~l~~g~~dg--~v-lWd~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 161 PRDIGTVLISYEYV--TL-TYSLVEN------EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp TTEEEEEEEECSSC--EE-EEETTTT------EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred cCCCCEEEEEeCCC--cE-EEECCCC------ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 2 23444443333 68 9987641 1122232210 0000 13556788899986666666
Q ss_pred CCeEEEEECCCCcEEE
Q 017755 317 SRCLHWYNLKDHKQDV 332 (366)
Q Consensus 317 ~~~l~~ydl~t~~~~~ 332 (366)
++.+.+||+++++...
T Consensus 232 Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 232 DNSLVFWDANSGHMIM 247 (902)
T ss_dssp TCCEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCcEEE
Confidence 7779999999987544
No 243
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=41.92 E-value=1.5e+02 Score=26.91 Aligned_cols=62 Identities=8% Similarity=0.014 Sum_probs=47.7
Q ss_pred EECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEECCEEEEEEecC
Q 017755 201 FIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVLRGCLWINSYYH 263 (366)
Q Consensus 201 ~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~ 263 (366)
|.+|+||..+..-.....-..+..-+...+.|+.+..|...+. ...-++..++.|++.....
T Consensus 346 yYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHh-tnlPFakvgD~l~mFgsER 407 (670)
T 3ju4_A 346 YYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHH-TTLPFAKVGDDLIMFGSER 407 (670)
T ss_dssp EETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCS-SCCCEEEETTEEEEEEECS
T ss_pred hhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccc-cCCCcceeCCEEEEEeccc
Confidence 8899999998765432222367777888899999999988765 3677888899999988753
No 244
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=41.26 E-value=1.9e+02 Score=25.52 Aligned_cols=184 Identities=11% Similarity=0.162 Sum_probs=86.2
Q ss_pred eEEeeecCceEEEEcCCCcceEe-cCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCc
Q 017755 103 LLAMFNRRLGMSVFNPTTKKFKL-FPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADT 181 (366)
Q Consensus 103 Ll~~~~~~~~~~V~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~ 181 (366)
++.....++.+.|||..+++... +... ......+.+.|.. + .++... ....+.+|+..+..
T Consensus 122 ~l~s~s~Dg~i~vwd~~~~~~~~~l~~h-----------~~~V~~v~~~~~~-~--~l~sgs----~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 122 VMVSASEDATIKVWDYETGDFERTLKGH-----------TDSVQDISFDHSG-K--LLASCS----ADMTIKLWDFQGFE 183 (410)
T ss_dssp EEEEEESSSCEEEEETTTCCCCEEECCC-----------SSCEEEEEECTTS-S--EEEEEE----TTSCCCEEETTSSC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecc-----------CCcEEEEEEcCCC-C--EEEEEe----CCCeEEEEeCCCCc
Confidence 34444457789999999887543 2211 1112345555542 2 222221 22345666665543
Q ss_pred EE-ecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCEE
Q 017755 182 WR-RTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGCL 256 (366)
Q Consensus 182 W~-~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~L 256 (366)
-. .+..-.... ..+.+ +|.....+..+ ..|..+|+.+.+.. .+..... ....+... +|.+
T Consensus 184 ~~~~~~~h~~~V-----~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~h~~----~v~~~~~~~~g~~ 248 (410)
T 1vyh_C 184 CIRTMHGHDHNV-----SSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKTFTGHRE----WVRMVRPNQDGTL 248 (410)
T ss_dssp EEECCCCCSSCE-----EEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSE
T ss_pred eeEEEcCCCCCE-----EEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEeCCCc----cEEEEEECCCCCE
Confidence 21 111100000 12222 45444444333 37889999876542 2222111 12222222 4666
Q ss_pred EEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEe--------------------CCCeEEEEEc
Q 017755 257 WINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSK--------------------DGDKALIYQH 316 (366)
Q Consensus 257 ~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~--------------------~g~~i~l~~~ 316 (366)
.+.+.... .+.+|.+... .- +..+..... ...-+.+.+ .|..++-...
T Consensus 249 l~s~s~D~--~v~vwd~~~~----~~--~~~~~~h~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~ 316 (410)
T 1vyh_C 249 IASCSNDQ--TVRVWVVATK----EC--KAELREHRH----VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR 316 (410)
T ss_dssp EEEEETTS--CEEEEETTTC----CE--EEEECCCSS----CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET
T ss_pred EEEEcCCC--eEEEEECCCC----ce--eeEecCCCc----eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC
Confidence 55555444 6999987642 11 122211110 122223333 2554555556
Q ss_pred CCeEEEEECCCCcEE
Q 017755 317 SRCLHWYNLKDHKQD 331 (366)
Q Consensus 317 ~~~l~~ydl~t~~~~ 331 (366)
++.+.+||+++++..
T Consensus 317 D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 317 DKTIKMWDVSTGMCL 331 (410)
T ss_dssp TSEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCceE
Confidence 677999999988643
No 245
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=40.88 E-value=1.4e+02 Score=26.34 Aligned_cols=45 Identities=13% Similarity=0.135 Sum_probs=30.6
Q ss_pred eeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc--CCeEEEEECCCCcEE
Q 017755 282 WSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH--SRCLHWYNLKDHKQD 331 (366)
Q Consensus 282 W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~--~~~l~~ydl~t~~~~ 331 (366)
...+.+|.... ...-+.+.++|+.+|+... +..+-++|++|++..
T Consensus 304 ~~vv~~i~vg~-----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 304 GQTSGPISNGH-----DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp CCEEECCEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred CeEEEEEECCC-----CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 44555555433 2444777889987777665 567999999998754
No 246
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=40.83 E-value=1.7e+02 Score=25.07 Aligned_cols=67 Identities=12% Similarity=0.200 Sum_probs=42.4
Q ss_pred CCEEEEEEecCCCCe-EEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCc
Q 017755 253 RGCLWINSYYHDEPR-CDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~-l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~ 329 (366)
+|++.+...... . +.||-+.. ...+..+....... ...-+++.++|..++....++.+.+||++++.
T Consensus 206 ~g~~l~s~s~d~--~~v~iwd~~~------~~~~~~~~~g~h~~--~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 206 KSDMVATCSQDG--TIIRVFKTED------GVLVREFRRGLDRA--DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TSSEEEEEETTC--SEEEEEETTT------CCEEEEEECTTCCS--CEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCEEEEEeCCC--CEEEEEECCC------CcEEEEEEcCCCCC--cEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 466555544433 6 99998774 23445554211111 35668888999966666677789999998764
No 247
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=40.47 E-value=1.9e+02 Score=25.31 Aligned_cols=102 Identities=11% Similarity=0.065 Sum_probs=53.4
Q ss_pred ceEEEEECC---Cc-eeEEECCCCCCCC---------CeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCC-CCeeE
Q 017755 220 NMILAFDLK---SE-KFYEVQQPHGMKG---------GFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQ-QSWSK 284 (366)
Q Consensus 220 ~~i~~fD~~---~e-~~~~i~~P~~~~~---------~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~-~~W~~ 284 (366)
..+++||+. +. .-..++++..... ...-.+++. +|..|+....... .||..+..+.. ..|-.
T Consensus 100 ~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~---~I~rV~pdG~~~~~~~~ 176 (334)
T 2p9w_A 100 SSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP---AIARVSADGKTVSTFAW 176 (334)
T ss_dssp CEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC---EEEEECTTSCCEEEEEE
T ss_pred CEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC---eEEEEeCCCCEEeeeee
Confidence 589999998 33 3334565421110 011233333 4788886664411 37777653321 11321
Q ss_pred EEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCC
Q 017755 285 LCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDH 328 (366)
Q Consensus 285 ~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~ 328 (366)
..+.-.......=+++.++|..+++....++|+.+|+++.
T Consensus 177 ----~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 177 ----ESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp ----CCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred ----cCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1111111112334677889986777656666999998853
No 248
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=40.28 E-value=1.7e+02 Score=24.82 Aligned_cols=112 Identities=10% Similarity=0.031 Sum_probs=63.2
Q ss_pred ECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE--CCEEEEEEecCCCCeEEEEEEeecCCC
Q 017755 202 IAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQ 279 (366)
Q Consensus 202 ~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~ 279 (366)
.+|.+||..... ..|.++|+....-..+-- .... .-..+++. +|.|++..... .-.|++++..+
T Consensus 87 ~~~~ly~~d~~~------~~I~~~~~~g~~~~~~~~-~~~~--~P~~iavdp~~g~ly~~d~~~---~~~I~~~~~dG-- 152 (316)
T 1ijq_A 87 IHSNIYWTDSVL------GTVSVADTKGVKRKTLFR-ENGS--KPRAIVVDPVHGFMYWTDWGT---PAKIKKGGLNG-- 152 (316)
T ss_dssp TTTEEEEEETTT------TEEEEEETTSSSEEEEEE-CTTC--CEEEEEEETTTTEEEEEECSS---SCEEEEEETTS--
T ss_pred cCCeEEEEECCC------CEEEEEeCCCCceEEEEE-CCCC--CcceEEeCCCCCEEEEEccCC---CCeEEEEcCCC--
Confidence 368999987654 479999998654443311 1111 12344443 68888876532 12566665322
Q ss_pred CCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcEEEE
Q 017755 280 QSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 280 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~~~v 333 (366)
+-.+ .+....+ ....-+++.++++.+|+.... ..+..+|++.+..+.+
T Consensus 153 -~~~~--~~~~~~~---~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 153 -VDIY--SLVTENI---QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp -CCEE--EEECSSC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred -CCeE--EEEECCC---CCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 1111 1211111 134457777667778887644 4699999987666555
No 249
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=40.04 E-value=5.1 Score=35.76 Aligned_cols=111 Identities=5% Similarity=-0.052 Sum_probs=0.0
Q ss_pred CCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEee
Q 017755 197 CNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKE 275 (366)
Q Consensus 197 ~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~ 275 (366)
..+++.+|.+|.-..++ .|.++|..+.+-..- +. ... ...-...+|+++++..... .+..|-.+.
T Consensus 3 ssP~v~~~~v~~gs~dg-------~v~a~d~~tG~~~W~~~~-~~~----~s~p~~~~g~~~v~~s~dg--~l~a~d~~t 68 (369)
T 2hz6_A 3 STVTLPETLLFVSTLDG-------SLHAVSKRTGSIKWTLKE-DPV----LQVPTHVEEPAFLPDPNDG--SLYTLGSKN 68 (369)
T ss_dssp -----CTTEEEEEETTS-------EEEEEETTTCCEEEEEEC-CCS----CCCC-----CCEEECTTTC--CEEEC----
T ss_pred CCCeeeCCEEEEEcCCC-------EEEEEECCCCCEEEEecC-CCc----eecceEcCCCEEEEeCCCC--EEEEEECCC
Q ss_pred cCCCCCeeEEEEecCCCCCCcceeEEEEEEe-CCCeEEEEEcCCeEEEEECCCCcEE
Q 017755 276 YGSQQSWSKLCSFSKMLHETCYYTEAFAFSK-DGDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 276 ~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~-~g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
.+..|........... ..... +++.|++...+..++.+|++|++..
T Consensus 69 --G~~~w~~~~~~~~~~~--------~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~ 115 (369)
T 2hz6_A 69 --NEGLTKLPFTIPELVQ--------ASPCRSSDGILYMGKKQDIWYVIDLLTGEKQ 115 (369)
T ss_dssp ---CCSEECSCCHHHHHT--------TCSCC-----CCCCEEEEEEEEECCC-----
T ss_pred --CceeeeeeccCccccc--------cCceEecCCEEEEEeCCCEEEEEECCCCcEE
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=40.01 E-value=94 Score=26.08 Aligned_cols=22 Identities=14% Similarity=0.122 Sum_probs=12.9
Q ss_pred ecccceEEeeecCceEEEEcCCCcc
Q 017755 98 GCCHGLLAMFNRRLGMSVFNPTTKK 122 (366)
Q Consensus 98 ~s~nGLl~~~~~~~~~~V~NP~t~~ 122 (366)
...+|.|.+.... ++.+|+ +++
T Consensus 67 ~~~~g~l~v~t~~--l~~~d~-~g~ 88 (330)
T 3hxj_A 67 IGKDGTIYFGSDK--VYAINP-DGT 88 (330)
T ss_dssp ETTTTEECCSSCE--EEEECC-CGG
T ss_pred EecCCcEEEecCc--EEEECC-CCc
Confidence 3346766554323 888898 443
No 251
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=39.28 E-value=1.7e+02 Score=24.55 Aligned_cols=106 Identities=9% Similarity=0.116 Sum_probs=57.4
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCC
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQ 280 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~ 280 (366)
+|.+...+..+ ..|..+|+.+.+-. .+..+.. ...+.-. +|.+..... .. .+.+|.++..
T Consensus 207 ~g~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~-----v~~~~~sp~~~~la~~~-~~--~i~v~~~~~~---- 268 (319)
T 3frx_A 207 DGTLIASAGKD------GEIMLWNLAAKKAMYTLSAQDE-----VFSLAFSPNRYWLAAAT-AT--GIKVFSLDPQ---- 268 (319)
T ss_dssp TSSEEEEEETT------CEEEEEETTTTEEEEEEECCSC-----EEEEEECSSSSEEEEEE-TT--EEEEEEETTE----
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEecCCCc-----EEEEEEcCCCCEEEEEc-CC--CcEEEEeCcC----
Confidence 45554444444 37899999876542 2333221 2223222 344433333 22 6899988741
Q ss_pred CeeEEEEecCCC--CCCcc--eeEEEEEEeCCCeEEEEEcCCeEEEEECCCC
Q 017755 281 SWSKLCSFSKML--HETCY--YTEAFAFSKDGDKALIYQHSRCLHWYNLKDH 328 (366)
Q Consensus 281 ~W~~~~~i~~~~--~~~~~--~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~ 328 (366)
..+..+.... ..... ...-+++.++|+.++-...++.+.+||+.|+
T Consensus 269 --~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 269 --YLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp --EEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred --eeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 1122222111 11001 3445788899997766667777999998775
No 252
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=39.20 E-value=1.8e+02 Score=24.64 Aligned_cols=66 Identities=14% Similarity=0.171 Sum_probs=36.0
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeC--CCeEEEEEcCCeEEEEECCCC
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKD--GDKALIYQHSRCLHWYNLKDH 328 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~--g~~i~l~~~~~~l~~ydl~t~ 328 (366)
+|.+.+...... .+.||.+.. ..|..+..+....- ...-+.+.++ +..++-...++.+.+||++++
T Consensus 164 ~~~~l~s~s~D~--~i~iW~~~~----~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 164 SEALLASSSYDD--TVRIWKDYD----DDWECVAVLNGHEG----TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp SSSEEEEEETTS--CEEEEEEET----TEEEEEEEECCCSS----CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCEEEEEcCCC--eEEEEECCC----CCeeEEEEccCCCC----cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 455544444444 799998763 34655555432211 2344566665 443344445566888887543
No 253
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=39.10 E-value=1.7e+02 Score=24.54 Aligned_cols=94 Identities=13% Similarity=0.101 Sum_probs=53.7
Q ss_pred ceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcce
Q 017755 220 NMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYY 298 (366)
Q Consensus 220 ~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 298 (366)
..|..+|+.+.+....-..+ . .....+... +|++.+...... .+.||-+... ..+..+.... .
T Consensus 176 ~~i~~wd~~~~~~~~~~~~h-~--~~v~~~~~sp~g~~l~s~~~dg--~i~iwd~~~~------~~~~~~~~~~-----~ 239 (319)
T 3frx_A 176 KMVKAWNLNQFQIEADFIGH-N--SNINTLTASPDGTLIASAGKDG--EIMLWNLAAK------KAMYTLSAQD-----E 239 (319)
T ss_dssp SCEEEEETTTTEEEEEECCC-C--SCEEEEEECTTSSEEEEEETTC--EEEEEETTTT------EEEEEEECCS-----C
T ss_pred CEEEEEECCcchhheeecCC-C--CcEEEEEEcCCCCEEEEEeCCC--eEEEEECCCC------cEEEEecCCC-----c
Confidence 37888999876653321111 1 112233333 466555555444 7999988641 2344444322 2
Q ss_pred eEEEEEEeCCCeEEEEEcCCeEEEEECCCCcE
Q 017755 299 TEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
..-+++.++|..+ ....+..+.+|+++++..
T Consensus 240 v~~~~~sp~~~~l-a~~~~~~i~v~~~~~~~~ 270 (319)
T 3frx_A 240 VFSLAFSPNRYWL-AAATATGIKVFSLDPQYL 270 (319)
T ss_dssp EEEEEECSSSSEE-EEEETTEEEEEEETTEEE
T ss_pred EEEEEEcCCCCEE-EEEcCCCcEEEEeCcCee
Confidence 5568888998844 444455588999887654
No 254
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=37.70 E-value=2.6e+02 Score=26.21 Aligned_cols=102 Identities=16% Similarity=0.129 Sum_probs=56.4
Q ss_pred ceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCC--Cc
Q 017755 220 NMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHE--TC 296 (366)
Q Consensus 220 ~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~--~~ 296 (366)
..|..+|..+.+.... +..+. ..-..+.-. +|++.+...... .+.||-+... + ....+....+. +.
T Consensus 170 ~~v~lwd~~~~~~~~~-l~~H~--~~V~~v~fspdg~~las~s~D~--~i~lwd~~~g----~--~~~~~~~~~~~~~~h 238 (611)
T 1nr0_A 170 NTVAIFEGPPFKFKST-FGEHT--KFVHSVRYNPDGSLFASTGGDG--TIVLYNGVDG----T--KTGVFEDDSLKNVAH 238 (611)
T ss_dssp SCEEEEETTTBEEEEE-ECCCS--SCEEEEEECTTSSEEEEEETTS--CEEEEETTTC----C--EEEECBCTTSSSCSS
T ss_pred CeEEEEECCCCeEeee-ecccc--CceEEEEECCCCCEEEEEECCC--cEEEEECCCC----c--Eeeeecccccccccc
Confidence 3688888877655322 11111 112222222 466655555444 7999987642 1 12222111110 11
Q ss_pred c-eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEE
Q 017755 297 Y-YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDV 332 (366)
Q Consensus 297 ~-~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~ 332 (366)
. ...-+++.++|+.++-...++.+.+||+++++...
T Consensus 239 ~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 239 SGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEK 275 (611)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee
Confidence 1 35557888999866666677789999999887543
No 255
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=37.61 E-value=1.2e+02 Score=26.61 Aligned_cols=72 Identities=8% Similarity=0.165 Sum_probs=41.6
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc-eeEEEEEEeCC-CeEEEEEcCCeEEEEECCCCcE
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY-YTEAFAFSKDG-DKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~-~~~~~~~~~~g-~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
+|++.+.. .. ..+.||-++..+ ..+. ...+....+.+.. ...-+.+.++| ..++....++.+.+||+++++.
T Consensus 188 ~~~~l~s~-~d--~~i~iwd~~~~~--~~~~-~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 188 DYETYLSA-DD--LRINLWHLEITD--RSFN-IVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp TSSEEEEE-CS--SEEEEEETTEEE--EEEE-EEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred CCCEEEEe-CC--CeEEEEECCCCC--ceee-eeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 45555444 32 389999887421 1111 1122221222111 35667888888 7566666777799999999874
No 256
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=37.59 E-value=1.3e+02 Score=28.70 Aligned_cols=118 Identities=10% Similarity=0.054 Sum_probs=0.0
Q ss_pred CCceEECCeEEEEEe-eCCCCCCcceEEEEEC-CCceeEEE-CCCCC-------CCCCeeeEEEE--ECCE----EEEEE
Q 017755 197 CNGVFIAGALHWLAA-RGSVRTGQNMILAFDL-KSEKFYEV-QQPHG-------MKGGFCSQVGV--LRGC----LWINS 260 (366)
Q Consensus 197 ~~~v~~~G~lyw~~~-~~~~~~~~~~i~~fD~-~~e~~~~i-~~P~~-------~~~~~~~~l~~--~~G~----L~~v~ 260 (366)
..+++.+|.+|.... .. .+.++|. .+.+-..- +.+.. ..+.....++. .+|+ +++..
T Consensus 56 ~tP~v~~g~vyv~~~~~~-------~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t 128 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN-------NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ 128 (599)
T ss_dssp SCCEEETTEEEEECSTTT-------CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC
T ss_pred eccEEECCEEEEEeCCCC-------EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc
Q ss_pred ecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc------CCeEEEEECCCCcEE
Q 017755 261 YYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH------SRCLHWYNLKDHKQD 331 (366)
Q Consensus 261 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~------~~~l~~ydl~t~~~~ 331 (366)
. .=.|..++-...+..|.....-..... ......+..+|. |++... +..++.||.+|++..
T Consensus 129 ~-----dg~l~AlDa~TG~~~W~~~~~~~~~~~----~~~ssP~v~~g~-V~vg~~g~e~g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 129 L-----DGNVAALNAETGETVWKVENSDIKVGS----TLTIAPYVVKDK-VIIGSSGAELGVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp T-----TSEEEEEETTTCCEEEEEECCCGGGTC----BCCSCCEEETTE-EEECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred C-----CCEEEEEECCCCCEEEeecCCCCCccc----eeecCCEEECCE-EEEEecccccCCCCeEEEEECCCCcEE
No 257
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=37.34 E-value=1.3e+02 Score=28.64 Aligned_cols=32 Identities=6% Similarity=0.287 Sum_probs=28.0
Q ss_pred eEEEEEEeCCCeEEEEEcCCeEEEEECCCCcE
Q 017755 299 TEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
..-++++++|+.++....++.+..||+++++.
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTT
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 66789999999888888888899999999863
No 258
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=36.14 E-value=2.3e+02 Score=27.30 Aligned_cols=83 Identities=8% Similarity=0.027 Sum_probs=0.0
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCC-----eEEEEECCC
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSR-----CLHWYNLKD 327 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~-----~l~~ydl~t 327 (366)
++.++..........-.||+++. ....|..+...+...-.......-..+++||+.|.+..... .+.++|+++
T Consensus 83 G~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 83 GKRYFYFYNTGLQNQRVLYVQDS--LEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp TTEEEEEEECSSCSSCEEEEESS--TTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred CCEEEEEEEcCCceEEEEEEEcC--CCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Q ss_pred CcEEEEEEec
Q 017755 328 HKQDVIEIRN 337 (366)
Q Consensus 328 ~~~~~v~~~~ 337 (366)
++.....+.+
T Consensus 161 g~~~~~~~~~ 170 (710)
T 2xdw_A 161 AKELPDVLER 170 (710)
T ss_dssp TEEEEEEEEE
T ss_pred CCCCcccccC
No 259
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=36.07 E-value=2.9e+02 Score=26.28 Aligned_cols=36 Identities=8% Similarity=0.087 Sum_probs=25.5
Q ss_pred eeEEEEEEeCCCeEEEEEcC----CeEEEEECCCCcEEEE
Q 017755 298 YTEAFAFSKDGDKALIYQHS----RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~~----~~l~~ydl~t~~~~~v 333 (366)
....+.+.+||+.++..... ..+..+|+++++...+
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 34557888999865454332 2499999999987766
No 260
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=34.82 E-value=2.1e+02 Score=24.24 Aligned_cols=203 Identities=9% Similarity=0.040 Sum_probs=94.2
Q ss_pred EecccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEE
Q 017755 97 IGCCHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIY 175 (366)
Q Consensus 97 ~~s~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vy 175 (366)
.+..+|.+...+ ....++++||.+++...++... . ...+.+++. +++ ++. . ...+.+|
T Consensus 56 ~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~----------~--v~~i~~~~d-g~l-~v~-~------~~gl~~~ 114 (326)
T 2ghs_A 56 FDPASGTAWWFNILERELHELHLASGRKTVHALPF----------M--GSALAKISD-SKQ-LIA-S------DDGLFLR 114 (326)
T ss_dssp EETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSS----------C--EEEEEEEET-TEE-EEE-E------TTEEEEE
T ss_pred EeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCC----------c--ceEEEEeCC-CeE-EEE-E------CCCEEEE
Confidence 344445444433 4568899999998766543221 1 223455553 222 222 1 1237788
Q ss_pred EcCCCcEEecCCCCceeecCCCCceEE--CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-
Q 017755 176 SLKADTWRRTREFPYYILDDRCNGVFI--AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL- 252 (366)
Q Consensus 176 ss~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~- 252 (366)
+..++..+.+...+..........+.+ +|.+|..............|..+| +.+...+.- ... ....++..
T Consensus 115 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~--~~~~i~~s~ 188 (326)
T 2ghs_A 115 DTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DIS--IPNSICFSP 188 (326)
T ss_dssp ETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EES--SEEEEEECT
T ss_pred ECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCc--ccCCeEEcC
Confidence 888888776543221100000012222 677654333211111124788888 456554421 110 11123333
Q ss_pred CC-EEEEEEecCCCCeEEEEEEeecCCCC-Cee--E-EEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEECC
Q 017755 253 RG-CLWINSYYHDEPRCDIWVMKEYGSQQ-SWS--K-LCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNLK 326 (366)
Q Consensus 253 ~G-~L~~v~~~~~~~~l~iW~l~~~~~~~-~W~--~-~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~ 326 (366)
+| .|++...... .+.+|.++... . ... + ...+.... + ...-+.+.++|. +++... ...+..||++
T Consensus 189 dg~~lyv~~~~~~--~I~~~d~~~~~--Gl~~~~~~~~~~~~~~~--~--~p~gi~~d~~G~-lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 189 DGTTGYFVDTKVN--RLMRVPLDART--GLPTGKAEVFIDSTGIK--G--GMDGSVCDAEGH-IWNARWGEGAVDRYDTD 259 (326)
T ss_dssp TSCEEEEEETTTC--EEEEEEBCTTT--CCBSSCCEEEEECTTSS--S--EEEEEEECTTSC-EEEEEETTTEEEEECTT
T ss_pred CCCEEEEEECCCC--EEEEEEccccc--CCcccCceEEEECCCCC--C--CCCeeEECCCCC-EEEEEeCCCEEEEECCC
Confidence 45 4666544322 45455443101 1 111 1 11221111 0 233355666776 777653 4569999996
Q ss_pred CCcEEEEEE
Q 017755 327 DHKQDVIEI 335 (366)
Q Consensus 327 t~~~~~v~~ 335 (366)
.+..+.+..
T Consensus 260 g~~~~~i~~ 268 (326)
T 2ghs_A 260 GNHIARYEV 268 (326)
T ss_dssp CCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 665666644
No 261
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=34.32 E-value=2.2e+02 Score=27.55 Aligned_cols=85 Identities=13% Similarity=0.036 Sum_probs=49.2
Q ss_pred EECCEEEEEEecCCCCeEEEEEEeecC-CCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-----CeEEEEE
Q 017755 251 VLRGCLWINSYYHDEPRCDIWVMKEYG-SQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-----RCLHWYN 324 (366)
Q Consensus 251 ~~~G~L~~v~~~~~~~~l~iW~l~~~~-~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-----~~l~~yd 324 (366)
-.++.++........+.-.||+++... ....|..+...+...-.+.....-..+++||+.|.+.... ..+.++|
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 345677776665443357889987430 0245665543322111010124446778899977776532 2499999
Q ss_pred CCCCcEEEEEE
Q 017755 325 LKDHKQDVIEI 335 (366)
Q Consensus 325 l~t~~~~~v~~ 335 (366)
+++++.....+
T Consensus 196 l~tg~~~~~~~ 206 (741)
T 1yr2_A 196 VADGKPLADEL 206 (741)
T ss_dssp TTTCCEEEEEE
T ss_pred CCCCCCCCccC
Confidence 99999866543
No 262
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=33.36 E-value=2.1e+02 Score=23.76 Aligned_cols=139 Identities=9% Similarity=0.051 Sum_probs=75.2
Q ss_pred eeEEEEEEcCCCcEEecCCCCceeecCCCCce--EECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCe
Q 017755 169 YLEVIIYSLKADTWRRTREFPYYILDDRCNGV--FIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGF 245 (366)
Q Consensus 169 ~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v--~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~ 245 (366)
.-.+..|+..++.-+.... +... .++ .-+|. +|++.. ..|..||+.+.+++.+ ..+.......
T Consensus 34 ~~~i~~~d~~~~~~~~~~~-~~~~-----~~i~~~~dG~-l~v~~~-------~~l~~~d~~~g~~~~~~~~~~~~~~~~ 99 (297)
T 3g4e_A 34 AKKVCRWDSFTKQVQRVTM-DAPV-----SSVALRQSGG-YVATIG-------TKFCALNWKEQSAVVLATVDNDKKNNR 99 (297)
T ss_dssp TTEEEEEETTTCCEEEEEC-SSCE-----EEEEEBTTSS-EEEEET-------TEEEEEETTTTEEEEEEECCTTCSSEE
T ss_pred CCEEEEEECCCCcEEEEeC-CCce-----EEEEECCCCC-EEEEEC-------CeEEEEECCCCcEEEEEecCCCCCCCC
Confidence 3456777777664433221 1111 122 23677 455542 3799999999988776 3332221111
Q ss_pred eeEEEEE-CCEEEEEEecCC-------CCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-
Q 017755 246 CSQVGVL-RGCLWINSYYHD-------EPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH- 316 (366)
Q Consensus 246 ~~~l~~~-~G~L~~v~~~~~-------~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~- 316 (366)
...+... +|+|++...... ...-.||.++.. ..-..+. .... ...-+++.++|+.+++...
T Consensus 100 ~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~---g~~~~~~--~~~~-----~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 100 FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD---HHVKKYF--DQVD-----ISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT---SCEEEEE--EEES-----BEEEEEECTTSCEEEEEEGG
T ss_pred CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC---CCEEEEe--eccc-----cccceEEcCCCCEEEEecCC
Confidence 2233333 589888765432 124678888742 2222211 1111 2445778889987777654
Q ss_pred CCeEEEEEC--CCCcEE
Q 017755 317 SRCLHWYNL--KDHKQD 331 (366)
Q Consensus 317 ~~~l~~ydl--~t~~~~ 331 (366)
...+..||+ +++++.
T Consensus 170 ~~~i~~~~~d~~~G~~~ 186 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQIS 186 (297)
T ss_dssp GTEEEEEEECTTTCCEE
T ss_pred CCcEEEEeccCCCCccc
Confidence 346888876 677663
No 263
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=33.22 E-value=3.3e+02 Score=26.00 Aligned_cols=203 Identities=8% Similarity=-0.069 Sum_probs=96.6
Q ss_pred eEEEEcCCCcce---EecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEE----cCCCcEEe
Q 017755 112 GMSVFNPTTKKF---KLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYS----LKADTWRR 184 (366)
Q Consensus 112 ~~~V~NP~t~~~---~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vys----s~~~~W~~ 184 (366)
.+.++|..+++. ..+..+.... .+ ......+.+.|. + +++............+.+++ ..++.++.
T Consensus 225 ~l~~~d~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~SpD-~--~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 225 RIFIIDTTYPAYVGPQEVPVPAMIA-SS----DYYFSWLTWVTD-E--RVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp EEEEEESSCHHHHCCEECCCCHHHH-TS----CEEEEEEEESSS-S--EEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred EEEEEECCCCCccceeEccCCccCC-CC----cceEEEeEEeCC-C--eEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 688999999875 2443321000 00 222334555554 2 34443333334456777888 76766655
Q ss_pred cCC----CCceeec---CCCCceEECCe-EEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEECCEE
Q 017755 185 TRE----FPYYILD---DRCNGVFIAGA-LHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVLRGCL 256 (366)
Q Consensus 185 ~~~----~p~~~~~---~~~~~v~~~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~~G~L 256 (366)
+.. -...... .......-+|. +++......+ ...|..+|+.+.+...+.-... + ........++.|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~~~l~~~~~~~~~~~~lt~~~~--~-v~~~~~~d~~~i 370 (719)
T 1z68_A 297 TQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG---YKHIHYIKDTVENAIQITSGKW--E-AINIFRVTQDSL 370 (719)
T ss_dssp GGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS---CEEEEEESSCSTTCEECSCSSS--C-EEEEEEECSSEE
T ss_pred EEecccccCCceEccccCCccEECCCCCeEEEEEEccCC---ceEEEEEECCCCceEecccCce--E-EEEEEEEeCCEE
Confidence 431 1100000 00111223565 4443333321 2478889998877554432111 1 111222233456
Q ss_pred EEEEec--CCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCc-ceeEEEEEEeCCCeEEEEEcC---CeEEEEECCCCcE
Q 017755 257 WINSYY--HDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETC-YYTEAFAFSKDGDKALIYQHS---RCLHWYNLKDHKQ 330 (366)
Q Consensus 257 ~~v~~~--~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~-~~~~~~~~~~~g~~i~l~~~~---~~l~~ydl~t~~~ 330 (366)
++.... .......+|.++..+..... ..+.. .+.+. .......+.++|+.+++.... -.+..||+++++.
T Consensus 371 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~---~~l~~-~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 371 FYSSNEFEEYPGRRNIYRISIGSYPPSK---KCVTC-HLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQE 446 (719)
T ss_dssp EEEESCGGGCTTCBEEEEEECSSSSCCE---EESST-TTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCE
T ss_pred EEEEecCCCCCceEEEEEEeCCCCCCCc---eeccC-ccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCE
Confidence 555543 22236899999853211111 22221 01101 124456777888866665432 2478889988875
Q ss_pred EE
Q 017755 331 DV 332 (366)
Q Consensus 331 ~~ 332 (366)
..
T Consensus 447 ~~ 448 (719)
T 1z68_A 447 IK 448 (719)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 264
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=32.08 E-value=2.3e+02 Score=27.49 Aligned_cols=76 Identities=8% Similarity=0.062 Sum_probs=39.8
Q ss_pred eEEeecCCCCCeeEEEEEEecccceeEEEEEEcCCCcEEecCCCCceeecCCCCceEECCeEEEEEeeCCCCCCcceEEE
Q 017755 145 DGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLKADTWRRTREFPYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILA 224 (366)
Q Consensus 145 ~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~~~~W~~~~~~p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~ 224 (366)
.++.+|+..+...+.- .....+++|+..+..-+.+....... .....-.+..+.+||..... ..|..
T Consensus 543 nGlavd~~~~~LY~aD------~~~~~I~~~d~dG~~~~~~~~~~~~~-~~P~glavd~~~lywtd~~~------~~V~~ 609 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVD------SKLHSISSIDVNGGNRKTILEDEKRL-AHPFSLAVFEDKVFWTDIIN------EAIFS 609 (699)
T ss_dssp CCEEECTTTCCEEEEE------TTTTEEEEECSSSSCCEEECCCSSSC-SSCCCCEEETTEEEEECSTT------TCEEE
T ss_pred cEEEEeccCCEEEEEe------cCCCeEEEEccCCCceEEEEecCCcC-CCceEeEEECCEEEEEeCCC------CeEEE
Confidence 3566776544433221 23456777777543333332211111 11111234567999998654 47999
Q ss_pred EECCCceeE
Q 017755 225 FDLKSEKFY 233 (366)
Q Consensus 225 fD~~~e~~~ 233 (366)
+|..+.+..
T Consensus 610 ~d~~~G~~~ 618 (699)
T 1n7d_A 610 ANRLTGSDV 618 (699)
T ss_dssp EETTTEEEE
T ss_pred EEccCCCce
Confidence 998766543
No 265
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=31.71 E-value=2.7e+02 Score=24.62 Aligned_cols=111 Identities=9% Similarity=0.020 Sum_probs=62.3
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE--CCEEEEEEecCCCCeEEEEEEeecCCCC
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL--RGCLWINSYYHDEPRCDIWVMKEYGSQQ 280 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~--~G~L~~v~~~~~~~~l~iW~l~~~~~~~ 280 (366)
+|.|||..... ..|.++|+.......+-. .... .-..+++. +|.|+....... -.|++.+..+.
T Consensus 170 ~~~lY~~d~~~------~~I~~~~~~g~~~~~l~~-~~~~--~P~~iavdp~~g~ly~td~~~~---~~I~~~~~dG~-- 235 (400)
T 3p5b_L 170 HSNIYWTDSVL------GTVSVADTKGVKRKTLFR-ENGS--KPRAIVVDPVHGFMYWTDWGTP---AKIKKGGLNGV-- 235 (400)
T ss_dssp TTEEEEEETTT------TEEEEECTTTCSEEEEEE-CSSC--CEEEEEEETTTTEEEEEECSSS---CCEEEEETTSC--
T ss_pred CCceEEEECCC------CeEEEEeCCCCceEEEEe-CCCC--CcceEEEecccCeEEEEeCCCC---CEEEEEeCCCC--
Confidence 78999987654 379999998765444311 1111 12344443 588887765322 24555553221
Q ss_pred CeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcC-CeEEEEECCCCcEEEE
Q 017755 281 SWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHS-RCLHWYNLKDHKQDVI 333 (366)
Q Consensus 281 ~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~-~~l~~ydl~t~~~~~v 333 (366)
-.+ .+-...+ ....-+++.++++.||+.... ..+..+|++....+.+
T Consensus 236 -~~~--~~~~~~l---~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 236 -DIY--SLVTENI---QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp -SCE--EEECSSC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred -ccE--EEEECCC---CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 111 1111111 124446777666668887643 4588899887666655
No 266
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=30.87 E-value=69 Score=23.64 Aligned_cols=43 Identities=14% Similarity=0.213 Sum_probs=25.6
Q ss_pred ceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEE
Q 017755 111 LGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRII 162 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 162 (366)
-.+++++|.+++|...-.. .. ..+.+.+-.++.+..|+|+.+.
T Consensus 11 A~V~~~d~~~~~W~~~g~G--~~-------~l~~V~i~~~~~~~~~Riv~~~ 53 (130)
T 1qc6_A 11 ASVMVYDDTSKKWVPIKPG--QQ-------GFSRINIYHNTASSTFRVVGVK 53 (130)
T ss_dssp EEEEEEETTTTEEEECC--------------CEEEEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCCCceeECCCC--ce-------eeeEEEEEecCCCcEEEEEEEe
Confidence 4688999999998764311 11 2233344455666677888763
No 267
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=29.98 E-value=3.8e+02 Score=25.71 Aligned_cols=102 Identities=10% Similarity=0.110 Sum_probs=61.4
Q ss_pred eEEEEECCCc--eeEEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEEeecC-CCCCeeEEEEecCCCCCCcc
Q 017755 221 MILAFDLKSE--KFYEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYG-SQQSWSKLCSFSKMLHETCY 297 (366)
Q Consensus 221 ~i~~fD~~~e--~~~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~-~~~~W~~~~~i~~~~~~~~~ 297 (366)
.|...|+.+. ++..+..+.... ...+...+++|++.+..... ...|+.++-.. ....|..+- ....
T Consensus 260 ~i~~~d~~~~~~~~~~l~~~~~~~---~~~~~~~g~~l~~~t~~~~~-~~~l~~~d~~~~~~~~~~~l~--~~~~----- 328 (693)
T 3iuj_A 260 RLYVKDLSQENAPLLTVQGDLDAD---VSLVDNKGSTLYLLTNRDAP-NRRLVTVDAANPGPAHWRDLI--PERQ----- 328 (693)
T ss_dssp EEEEEETTSTTCCCEEEECSSSSC---EEEEEEETTEEEEEECTTCT-TCEEEEEETTSCCGGGCEEEE--CCCS-----
T ss_pred EEEEEECCCCCCceEEEeCCCCce---EEEEeccCCEEEEEECCCCC-CCEEEEEeCCCCCccccEEEe--cCCC-----
Confidence 6777888765 677765544331 22345567888887765432 56777766432 224586432 2211
Q ss_pred eeEEEEEEeCCCeEEEEEcCC---eEEEEECCCCcEEEEEE
Q 017755 298 YTEAFAFSKDGDKALIYQHSR---CLHWYNLKDHKQDVIEI 335 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~~~---~l~~ydl~t~~~~~v~~ 335 (366)
.. . .+..+|+.+++...+. .+..+|++++..+.+.+
T Consensus 329 ~~-~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~ 367 (693)
T 3iuj_A 329 QV-L-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVAL 367 (693)
T ss_dssp SC-E-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECC
T ss_pred CE-E-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeec
Confidence 11 2 6777788777665432 59999999888877754
No 268
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=29.38 E-value=3.9e+02 Score=25.69 Aligned_cols=25 Identities=12% Similarity=-0.028 Sum_probs=19.5
Q ss_pred ccceEEeeecCceEEEEcCCCcceE
Q 017755 100 CHGLLAMFNRRLGMSVFNPTTKKFK 124 (366)
Q Consensus 100 ~nGLl~~~~~~~~~~V~NP~t~~~~ 124 (366)
.+|.|.+......++.+|+.|++.+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEV 151 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEE
Confidence 5677777666778999999998854
No 269
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=29.37 E-value=2.7e+02 Score=23.75 Aligned_cols=121 Identities=10% Similarity=0.085 Sum_probs=59.1
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCC---CC--CeeeEEEEE-CCEEEEEEecC---CCCeEEEEEE
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGM---KG--GFCSQVGVL-RGCLWINSYYH---DEPRCDIWVM 273 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~---~~--~~~~~l~~~-~G~L~~v~~~~---~~~~l~iW~l 273 (366)
+|.+|......... . ..|..+| +.+. .++|... .. ..-..+... +|+|+++.... ...++.+|-+
T Consensus 27 ~g~~~v~~~~~~~~-~-~~l~~~~--~g~~--~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 27 DGRLFLSLHQFYQP-E-MQVAELT--QDGL--IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp TSCEEEEECGGGCC-S-CSEEEEE--TTEE--EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET
T ss_pred CCCEEEEeCCCCCC-c-eEEEEEC--CCCe--ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC
Confidence 67776654221100 0 3577777 4443 3444321 11 112344443 48999987641 1124544444
Q ss_pred eecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc----CCeEEEEECCCCcEEEE
Q 017755 274 KEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH----SRCLHWYNLKDHKQDVI 333 (366)
Q Consensus 274 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~----~~~l~~ydl~t~~~~~v 333 (366)
+. .+-.+...++...........-+++.++++.+|+... ...+.+||+++++..++
T Consensus 101 ~t----g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 101 LN----NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp TT----TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE
T ss_pred CC----CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE
Confidence 32 2222333332111111112345677765555777754 34699999998886554
No 270
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.15 E-value=51 Score=21.58 Aligned_cols=21 Identities=10% Similarity=0.252 Sum_probs=15.7
Q ss_pred CeEEEEEcCCeEEEEECCCCc
Q 017755 309 DKALIYQHSRCLHWYNLKDHK 329 (366)
Q Consensus 309 ~~i~l~~~~~~l~~ydl~t~~ 329 (366)
.-+.....++++++||..|++
T Consensus 21 ~W~~v~T~dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 21 PWCVVWTGDERVFFYNPTTRL 41 (73)
T ss_dssp SCEEEEESSSCEEEEETTTTE
T ss_pred CcEEEECCCCCEEEecCcccc
Confidence 345555666779999999985
No 271
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=27.58 E-value=2.9e+02 Score=23.59 Aligned_cols=97 Identities=11% Similarity=0.241 Sum_probs=54.3
Q ss_pred ceEEEEECCCceeE-EECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc
Q 017755 220 NMILAFDLKSEKFY-EVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY 297 (366)
Q Consensus 220 ~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 297 (366)
..|..+|+.+.+.. .+...... .....+... +|.+.+...... .+.+|-+.. ..- +..+....-
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~~--v~~~~~~~~~~g~~l~sgs~Dg--~v~~wd~~~----~~~--~~~~~~h~~---- 241 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGAD--VLCLDLAPSETGNTFVSGGCDK--KAMVWDMRS----GQC--VQAFETHES---- 241 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSSC--EEEEEECCCSSCCEEEEEETTS--CEEEEETTT----CCE--EEEECCCSS----
T ss_pred CcEEEEeCCCCeEEEEEcCCCCC--eEEEEEEeCCCCCEEEEEeCCC--eEEEEECCC----CcE--EEEecCCCC----
Confidence 37888898876643 23321111 011111111 355555555444 799998764 112 222221111
Q ss_pred eeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcE
Q 017755 298 YTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 298 ~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
...-+.+.++|+.++-...++.+.+||+++++.
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 355678888898666666777799999988754
No 272
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=27.46 E-value=2.7e+02 Score=23.21 Aligned_cols=195 Identities=11% Similarity=0.044 Sum_probs=92.8
Q ss_pred ccceEEeee-cCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEEEEcC
Q 017755 100 CHGLLAMFN-RRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVIIYSLK 178 (366)
Q Consensus 100 ~nGLl~~~~-~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~vyss~ 178 (366)
.+|-|.+.+ ....++.+||.++....++... ...++.+++..+ . +|+ .. . .....+..|+..
T Consensus 41 ~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~------------~p~gia~~~dG~-l-~va-d~-~-~~~~~v~~~d~~ 103 (306)
T 2p4o_A 41 PDGTIFVTNHEVGEIVSITPDGNQQIHATVEG------------KVSGLAFTSNGD-L-VAT-GW-N-ADSIPVVSLVKS 103 (306)
T ss_dssp TTSCEEEEETTTTEEEEECTTCCEEEEEECSS------------EEEEEEECTTSC-E-EEE-EE-C-TTSCEEEEEECT
T ss_pred CCCCEEEEeCCCCeEEEECCCCceEEEEeCCC------------CceeEEEcCCCc-E-EEE-ec-c-CCcceEEEEcCC
Confidence 366665554 4668899999876544332211 244677776532 2 222 11 1 112345566777
Q ss_pred CCcEEecCCCCceeecCCCCce--EECCeEEEEEeeCCCCCCcceEEEEECCCceeEEE--C------CCCCCCCCeeeE
Q 017755 179 ADTWRRTREFPYYILDDRCNGV--FIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEV--Q------QPHGMKGGFCSQ 248 (366)
Q Consensus 179 ~~~W~~~~~~p~~~~~~~~~~v--~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i--~------~P~~~~~~~~~~ 248 (366)
++..+.+...+..... .++ ..+|.+|...... ..|..+|..+.+.+.. . .+...-. .--.
T Consensus 104 ~g~~~~~~~~~~~~~~---~g~~~~~~~~~~v~d~~~------g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~-~png 173 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFL---NGITPLSDTQYLTADSYR------GAIWLIDVVQPSGSIWLEHPMLARSNSESVFP-AANG 173 (306)
T ss_dssp TSCEEEEEECTTCSCE---EEEEESSSSEEEEEETTT------TEEEEEETTTTEEEEEEECGGGSCSSTTCCSC-SEEE
T ss_pred CCeEEEEEeCCCcccc---CcccccCCCcEEEEECCC------CeEEEEeCCCCcEeEEEECCccccccccCCCC-cCCC
Confidence 7776655433321110 112 2234445433212 3789999876532221 1 1111101 1122
Q ss_pred EEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-CCeEEEEECCC
Q 017755 249 VGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-SRCLHWYNLKD 327 (366)
Q Consensus 249 l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~~~l~~ydl~t 327 (366)
+...++.|++...... .+..+.++..+.-......... .. ..-+++.++|. +++... ...+..||++
T Consensus 174 is~dg~~lyv~d~~~~--~I~~~~~~~~g~~~~~~~~~~~---~~-----P~gi~vd~dG~-l~va~~~~~~V~~~~~~- 241 (306)
T 2p4o_A 174 LKRFGNFLYVSNTEKM--LLLRIPVDSTDKPGEPEIFVEQ---TN-----IDDFAFDVEGN-LYGATHIYNSVVRIAPD- 241 (306)
T ss_dssp EEEETTEEEEEETTTT--EEEEEEBCTTSCBCCCEEEEES---CC-----CSSEEEBTTCC-EEEECBTTCCEEEECTT-
T ss_pred cCcCCCEEEEEeCCCC--EEEEEEeCCCCCCCccEEEecc---CC-----CCCeEECCCCC-EEEEeCCCCeEEEECCC-
Confidence 3444567887776443 4444444321111111111111 11 22277788887 777654 3459999986
Q ss_pred CcEEEE
Q 017755 328 HKQDVI 333 (366)
Q Consensus 328 ~~~~~v 333 (366)
++...+
T Consensus 242 G~~~~~ 247 (306)
T 2p4o_A 242 RSTTII 247 (306)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 555444
No 273
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=27.31 E-value=2.9e+02 Score=23.51 Aligned_cols=75 Identities=13% Similarity=0.174 Sum_probs=40.1
Q ss_pred ceEE--CCeEEEEEeeCCCCCCcceEEEEECCCce-eEEECCCCCCC--CCeeeEEEEE--CCEEEEEEecC-CCCeEEE
Q 017755 199 GVFI--AGALHWLAARGSVRTGQNMILAFDLKSEK-FYEVQQPHGMK--GGFCSQVGVL--RGCLWINSYYH-DEPRCDI 270 (366)
Q Consensus 199 ~v~~--~G~lyw~~~~~~~~~~~~~i~~fD~~~e~-~~~i~~P~~~~--~~~~~~l~~~--~G~L~~v~~~~-~~~~l~i 270 (366)
++.+ +|.||++..... ......|+.||+.+.+ ...+.+|.... ...-..++.. +|.+++..... ....+.+
T Consensus 71 gv~~d~~g~L~v~D~g~~-~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v 149 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQ-SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIR 149 (343)
T ss_dssp EEEECSSSEEEEEECHHH-HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEE
T ss_pred EEEEcCCCcEEEEcCCCC-cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEE
Confidence 4555 488888764310 0001379999999877 46667764321 1112345554 46777765511 1124555
Q ss_pred EEEe
Q 017755 271 WVMK 274 (366)
Q Consensus 271 W~l~ 274 (366)
|-++
T Consensus 150 ~d~~ 153 (343)
T 2qe8_A 150 VDLQ 153 (343)
T ss_dssp EETT
T ss_pred EECC
Confidence 5544
No 274
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=26.51 E-value=3.8e+02 Score=24.68 Aligned_cols=183 Identities=8% Similarity=-0.001 Sum_probs=91.4
Q ss_pred CceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEe-cccceeEEEEEEc-CCCcEEecCC
Q 017755 110 RLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQS-YKVDYLEVIIYSL-KADTWRRTRE 187 (366)
Q Consensus 110 ~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~-~~~~~~~~~vyss-~~~~W~~~~~ 187 (366)
.+..-||+..+++.+.+..... .......+.| + +++..... .......+...+. +++.-..+..
T Consensus 43 ~g~~~lw~~~~g~~~~lt~~~~----------~~~~~~~~sp---d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~ 108 (582)
T 3o4h_A 43 EGSVNAYLYDGGETVKLNREPI----------NSVLDPHYGV---G-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA 108 (582)
T ss_dssp TTEEEEEEEETTEEEECCSSCC----------SEECEECTTC---S-EEEEEEECSTTSCCEEEEEEETTSTTCCEECTT
T ss_pred CCceeEEEEcCCCcEeeecccc----------cccccccCCC---C-eEEEEeccCCCCcceEEEEEeccCCCccccccC
Confidence 5566777766777666654321 1122344443 2 66655442 1223334444444 1222223322
Q ss_pred CCceeecCCCCceEECCe-EEEEEeeCCCCCCcceEEEEECCCceeEEE-CCCCCCCCCeeeEEEEECCEEEEEEecCCC
Q 017755 188 FPYYILDDRCNGVFIAGA-LHWLAARGSVRTGQNMILAFDLKSEKFYEV-QQPHGMKGGFCSQVGVLRGCLWINSYYHDE 265 (366)
Q Consensus 188 ~p~~~~~~~~~~v~~~G~-lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i-~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~ 265 (366)
.+... ..++.-+|. +++...... .+..+|+.+.+...+ ..|. ......-.+..|+........
T Consensus 109 ~~~~~----~~~~s~dg~~~~~~s~~~~------~~~l~d~~~g~~~~l~~~~~-----~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 109 VKPMR----ILSGVDTGEAVVFTGATED------RVALYALDGGGLRELARLPG-----FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp SCSBE----EEEEEECSSCEEEEEECSS------CEEEEEEETTEEEEEEEESS-----CEEEEEEETTEEEEEEEEETT
T ss_pred CCCce----eeeeCCCCCeEEEEecCCC------CceEEEccCCcEEEeecCCC-----ceEEECCCCCEEEEEEEcCCC
Confidence 21111 124566663 455544432 344779988876655 3332 122333333344434433222
Q ss_pred CeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCC--eEEEEECCCCcEE
Q 017755 266 PRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSR--CLHWYNLKDHKQD 331 (366)
Q Consensus 266 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~--~l~~ydl~t~~~~ 331 (366)
.-.||.++-.+ .++. .+....- ......+.+||+.|+....++ .++.||+++++.+
T Consensus 174 -~~~i~~~d~~~--g~~~---~l~~~~~----~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 174 -RVSLFTSNLSS--GGLR---VFDSGEG----SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp -EEEEEEEETTT--CCCE---EECCSSC----EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred -CeEEEEEcCCC--CCce---EeecCCC----ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 35677776322 3343 2221111 345678889999777444444 6999999999988
No 275
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=26.37 E-value=1.2e+02 Score=26.57 Aligned_cols=24 Identities=4% Similarity=0.048 Sum_probs=20.1
Q ss_pred ECCeEEEEEeeCCCCCCcceEEEEECCCcee
Q 017755 202 IAGALHWLAARGSVRTGQNMILAFDLKSEKF 232 (366)
Q Consensus 202 ~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~ 232 (366)
.+|.+|.-...+ .+.++|+.+.+-
T Consensus 110 ~~g~Vy~Gs~~g-------~l~ald~~tG~~ 133 (339)
T 2be1_A 110 EDEKVYTGSMRT-------IMYTINMLNGEI 133 (339)
T ss_dssp CCEEEEECEEEE-------EEEEEETTTCCE
T ss_pred cCCEEEEEecCC-------EEEEEECCCCcE
Confidence 789999988775 899999997654
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=26.36 E-value=3.5e+02 Score=24.18 Aligned_cols=142 Identities=10% Similarity=0.102 Sum_probs=72.1
Q ss_pred EEec-ccceEEeeecCceEEEEcCCCcceEecCCCCCCCccCCCCCCeeEeEEeecCCCCCeeEEEEEEecccceeEEEE
Q 017755 96 VIGC-CHGLLAMFNRRLGMSVFNPTTKKFKLFPQFWSDCYTDYMTNNFHFDGFGYDASTDDYKLVRIIQSYKVDYLEVII 174 (366)
Q Consensus 96 ~~~s-~nGLl~~~~~~~~~~V~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~v 174 (366)
.++. .+|.|.+.+....+.++|+.+++...+-+. .....++.+|+..+ .++............+.+
T Consensus 143 avdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~-----------~~~P~~ia~d~~G~--~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 143 SFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSG-----------LSKVRTICWTHEAD--SMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp EEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECC-----------CSCEEEEEECTTSS--EEEEEECCSCTTSEEEEE
T ss_pred EECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecC-----------CCCcceEEEeCCCC--EEEEEeCCCCcccceEEE
Confidence 4454 567776665447888999998876665331 11245677777543 222221111011223344
Q ss_pred EEcCCCcEEecCCCCceeecCCCCceEE---CCeEEEEEeeCCCCCCcceEEEEECCCceeE-EECCCCCCCCCeeeEEE
Q 017755 175 YSLKADTWRRTREFPYYILDDRCNGVFI---AGALHWLAARGSVRTGQNMILAFDLKSEKFY-EVQQPHGMKGGFCSQVG 250 (366)
Q Consensus 175 yss~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~-~i~~P~~~~~~~~~~l~ 250 (366)
++. .+.|.....++ ......++.+ +|.+|+..... ..|..||+.+.... ....+... .-..++
T Consensus 210 ~~~-~g~~~~~~~l~---~~~~p~giavdp~~g~lyv~d~~~------~~V~~~~~~~~~~~~~~~~~~~~---~P~gia 276 (430)
T 3tc9_A 210 LTR-ESGFKVITELT---KGQNCNGAETHPINGELYFNSWNA------GQVFRYDFTTQETTPLFTIQDSG---WEFHIQ 276 (430)
T ss_dssp EEG-GGTSCSEEEEE---ECSSCCCEEECTTTCCEEEEETTT------TEEEEEETTTTEEEEEEECSSSS---CCEEEE
T ss_pred EeC-CCceeeeeeec---cCCCceEEEEeCCCCEEEEEECCC------CEEEEEECCCCcEEEEEEcCCCC---cceeEE
Confidence 443 23332111111 1111234545 68888877544 48999999987763 33444321 122344
Q ss_pred EE-CCE-EEEEEecC
Q 017755 251 VL-RGC-LWINSYYH 263 (366)
Q Consensus 251 ~~-~G~-L~~v~~~~ 263 (366)
.. +|+ |+++....
T Consensus 277 ~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 277 FHPSGNYAYIVVVNQ 291 (430)
T ss_dssp ECTTSSEEEEEETTT
T ss_pred EcCCCCEEEEEECCC
Confidence 43 465 77776543
No 277
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=25.56 E-value=3e+02 Score=24.24 Aligned_cols=70 Identities=16% Similarity=0.149 Sum_probs=0.0
Q ss_pred CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCC-----Ccc----------------eeEEEEEEeC----C
Q 017755 254 GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHE-----TCY----------------YTEAFAFSKD----G 308 (366)
Q Consensus 254 G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~-----~~~----------------~~~~~~~~~~----g 308 (366)
.++|++...+. .+.+|...+ ...|+++|.......+ ..- ....+++.++ +
T Consensus 53 ~~~~~~~~~~~--~v~lw~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~ 127 (356)
T 2w18_A 53 KEPCIITACED--VVSLWKALD---AWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEK 127 (356)
T ss_dssp CEEEEEEEESS--EEEEEEESS---SSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CC
T ss_pred CccEEEEeccc--eEEEcccCC---CccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccc
Q ss_pred CeEEEEEcCCeEEEEECCCCcE
Q 017755 309 DKALIYQHSRCLHWYNLKDHKQ 330 (366)
Q Consensus 309 ~~i~l~~~~~~l~~ydl~t~~~ 330 (366)
. .++..... ..++++.++++
T Consensus 128 ~-~l~s~g~~-~~v~~l~~g~l 147 (356)
T 2w18_A 128 Q-VLLKSGNI-KAVLGLTKRRL 147 (356)
T ss_dssp E-EEEEEEEE-EEEEEETTTEE
T ss_pred c-EEEeCCCe-EEEEecCCCcE
No 278
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=25.49 E-value=3.5e+02 Score=23.81 Aligned_cols=67 Identities=9% Similarity=0.140 Sum_probs=39.4
Q ss_pred CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEE-EEEcCCeEEEEECCCC
Q 017755 253 RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKAL-IYQHSRCLHWYNLKDH 328 (366)
Q Consensus 253 ~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~-l~~~~~~l~~ydl~t~ 328 (366)
++.+.+.+.... .+.+|-+.... .......+....- ...-+.+.+++..++ ....++.+.+||+++.
T Consensus 243 ~~~~l~s~~~dg--~i~i~d~~~~~---~~~~~~~~~~~~~----~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 243 HESLFGSVADDQ--KLMIWDTRNNN---TSKPSHTVDAHTA----EVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp CTTEEEEEETTS--EEEEEETTCSC---SSSCSEEEECCSS----CEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCEEEEEeCCC--eEEEEECCCCC---CCcceeEeecCCC----CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 455665555444 79999887532 1112222221111 355677888887444 4456677999999984
No 279
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=24.71 E-value=3.3e+02 Score=23.35 Aligned_cols=77 Identities=14% Similarity=0.066 Sum_probs=34.9
Q ss_pred CCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeec--CCC
Q 017755 203 AGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEY--GSQ 279 (366)
Q Consensus 203 ~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~--~~~ 279 (366)
+|.+--.+..+ ..|..+|+.+.+.-..-+..+. ..-..+.-. +|++.+...... .++||.+... ...
T Consensus 280 dg~~lasgs~D------~~V~iwd~~~~~~~~~~~~gH~--~~V~~v~fSpdg~~laS~S~D~--tvrvw~ip~~~~~~~ 349 (365)
T 4h5i_A 280 KGELAVLASND------NSIALVKLKDLSMSKIFKQAHS--FAITEVTISPDSTYVASVSAAN--TIHIIKLPLNYANYT 349 (365)
T ss_dssp TSCEEEEEETT------SCEEEEETTTTEEEEEETTSSS--SCEEEEEECTTSCEEEEEETTS--EEEEEECCTTTTC--
T ss_pred CCCceEEEcCC------CEEEEEECCCCcEEEEecCccc--CCEEEEEECCCCCEEEEEeCCC--eEEEEEcCCCCcCcc
Confidence 66665555554 3799999988764322111111 112233333 466544444333 8999999642 113
Q ss_pred CCeeEEEEec
Q 017755 280 QSWSKLCSFS 289 (366)
Q Consensus 280 ~~W~~~~~i~ 289 (366)
.-|.++.++.
T Consensus 350 s~~~~l~kl~ 359 (365)
T 4h5i_A 350 SMKQKISKLE 359 (365)
T ss_dssp ----------
T ss_pred Cccccceeee
Confidence 3466655554
No 280
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=24.35 E-value=3.3e+02 Score=24.33 Aligned_cols=62 Identities=10% Similarity=0.145 Sum_probs=37.4
Q ss_pred CEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEE-ecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCC
Q 017755 254 GCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCS-FSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDH 328 (366)
Q Consensus 254 G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~-i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~ 328 (366)
+.+.+...... .+.+|-+... ..... ..... ...-+++.++|+.++....++.+.+||++.+
T Consensus 162 ~~~las~s~Dg--~v~iwD~~~~------~~~~~~~~~~~-----~v~~v~wspdg~~lasgs~dg~v~iwd~~~~ 224 (434)
T 2oit_A 162 PSMVAVCLADG--SIAVLQVTET------VKVCATLPSTV-----AVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQ 224 (434)
T ss_dssp TTEEEEEETTS--CEEEEEESSS------EEEEEEECGGG-----CEEEEEECTTSSCEEEEETTSCEEEECTTCC
T ss_pred CCEEEEEECCC--eEEEEEcCCC------cceeeccCCCC-----ceeEEEEcCCCCEEEEEcCCCcEEEEccCCc
Confidence 33444344333 6999988741 12221 11111 3555778889987777777778999999833
No 281
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=23.18 E-value=3.9e+02 Score=25.52 Aligned_cols=78 Identities=14% Similarity=0.104 Sum_probs=47.3
Q ss_pred ECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc-C----CeEEEEECC
Q 017755 252 LRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH-S----RCLHWYNLK 326 (366)
Q Consensus 252 ~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~-~----~~l~~ydl~ 326 (366)
.++.++..........-.||+++.. ...|..+...+...-.......-..+++||+.|.+... . ..+.++|++
T Consensus 78 dG~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKEKAILYWRQGE--SGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp ETTEEEEEEECTTCSSCEEEEEEST--TSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCC--CCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 4567777776554335788998853 24566554332211000113445677899997776642 1 359999999
Q ss_pred CCcEE
Q 017755 327 DHKQD 331 (366)
Q Consensus 327 t~~~~ 331 (366)
+++..
T Consensus 156 tg~~~ 160 (695)
T 2bkl_A 156 SGEWS 160 (695)
T ss_dssp TCCBC
T ss_pred CCCCc
Confidence 99865
No 282
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=23.08 E-value=3.2e+02 Score=22.53 Aligned_cols=142 Identities=11% Similarity=0.107 Sum_probs=70.3
Q ss_pred eeEEEEEEcCCC--cEEecCCC---CceeecCCCCceEECCeEEEEEeeCCCCCCcceEEEEECCCceeEEECCCCCCCC
Q 017755 169 YLEVIIYSLKAD--TWRRTREF---PYYILDDRCNGVFIAGALHWLAARGSVRTGQNMILAFDLKSEKFYEVQQPHGMKG 243 (366)
Q Consensus 169 ~~~~~vyss~~~--~W~~~~~~---p~~~~~~~~~~v~~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~~~~i~~P~~~~~ 243 (366)
.-.+.+++.+++ .|+.-..- +... .+.-+|.++. .. . ..|.+||++.+.--.+..|...
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~~~------~~~pdG~ilv-s~-~------~~V~~~d~~G~~~W~~~~~~~~-- 77 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECNSV------AATKAGEILF-SY-S------KGAKMITRDGRELWNIAAPAGC-- 77 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCCEE------EECTTSCEEE-EC-B------SEEEEECTTSCEEEEEECCTTC--
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCcCe------EECCCCCEEE-eC-C------CCEEEECCCCCEEEEEcCCCCc--
Confidence 345566777665 57754321 1111 2333787776 32 2 3799999954433335555322
Q ss_pred CeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcc-eeEEEEEEeCCCeEEEEEcCCeEE
Q 017755 244 GFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCY-YTEAFAFSKDGDKALIYQHSRCLH 321 (366)
Q Consensus 244 ~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~-~~~~~~~~~~g~~i~l~~~~~~l~ 321 (366)
........ +|++.++.... .-.++.++..+ +.-|.. .+... ..... ...-+...++|++++....+..+.
T Consensus 78 -~~~~~~~~~dG~~lv~~~~~---~~~v~~vd~~G-k~l~~~--~~~~~-~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~ 149 (276)
T 3no2_A 78 -EMQTARILPDGNALVAWCGH---PSTILEVNMKG-EVLSKT--EFETG-IERPHAQFRQINKNKKGNYLVPLFATSEVR 149 (276)
T ss_dssp -EEEEEEECTTSCEEEEEEST---TEEEEEECTTS-CEEEEE--EECCS-CSSGGGSCSCCEECTTSCEEEEETTTTEEE
T ss_pred -cccccEECCCCCEEEEecCC---CCEEEEEeCCC-CEEEEE--eccCC-CCcccccccCceECCCCCEEEEecCCCEEE
Confidence 11122223 57776665532 23566666422 333443 22211 11100 112234566888554444556799
Q ss_pred EEECCCCcEEEEE
Q 017755 322 WYNLKDHKQDVIE 334 (366)
Q Consensus 322 ~ydl~t~~~~~v~ 334 (366)
.||++.+.+.+..
T Consensus 150 ~~d~~G~~~w~~~ 162 (276)
T 3no2_A 150 EIAPNGQLLNSVK 162 (276)
T ss_dssp EECTTSCEEEEEE
T ss_pred EECCCCCEEEEEE
Confidence 9999844444443
No 283
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=22.82 E-value=2.5e+02 Score=24.67 Aligned_cols=72 Identities=10% Similarity=-0.024 Sum_probs=48.4
Q ss_pred CEEEEEEecCC-CCeEEEEEEeecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEc----------CCeEEE
Q 017755 254 GCLWINSYYHD-EPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQH----------SRCLHW 322 (366)
Q Consensus 254 G~L~~v~~~~~-~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~----------~~~l~~ 322 (366)
+++|+...... ... .|++++- .++..+.+|.....+ -+.+.++|+.+|+... +..+.+
T Consensus 32 ~~~yV~~~~~~~~~d-~vsvID~----~t~~v~~~i~vG~~P------~i~~spDg~~lyVan~~~~r~~~G~~~~~Vsv 100 (368)
T 1mda_H 32 RRSHITLPAYFAGTT-ENWVSCA----GCGVTLGHSLGAFLS------LAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100 (368)
T ss_dssp TEEEEEECTTTCSSE-EEEEEET----TTTEEEEEEEECTTC------EEEECTTSSCEEEEEEEETTTTSSSEEEEEEE
T ss_pred CeEEEECCccCCccc-eEEEEEC----CCCeEEEEEeCCCCC------ceEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 45555555332 112 7888874 457778888766542 2888899998998862 234999
Q ss_pred EECCCCcE-EEEEEe
Q 017755 323 YNLKDHKQ-DVIEIR 336 (366)
Q Consensus 323 ydl~t~~~-~~v~~~ 336 (366)
+|+.|++. ..|.+.
T Consensus 101 iD~~T~~vv~~I~v~ 115 (368)
T 1mda_H 101 FDPVTFLPIADIELP 115 (368)
T ss_dssp ECTTTCCEEEEEEET
T ss_pred EECCCCCEEEEEECC
Confidence 99999885 555554
No 284
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=22.60 E-value=1.5e+02 Score=21.93 Aligned_cols=18 Identities=0% Similarity=-0.119 Sum_probs=14.1
Q ss_pred ceEEEEcCCCcceEecCC
Q 017755 111 LGMSVFNPTTKKFKLFPQ 128 (366)
Q Consensus 111 ~~~~V~NP~t~~~~~lP~ 128 (366)
-.++.+||.||+|..+..
T Consensus 18 A~Vm~~Dd~tk~WlP~gg 35 (130)
T 3syx_A 18 AVVMTRDDSSGGWLPLGG 35 (130)
T ss_dssp EEEEEECSSSSCEEESSS
T ss_pred EEeeeEcCCCCceEeCCC
Confidence 368899999999776643
No 285
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=22.59 E-value=5e+02 Score=24.68 Aligned_cols=103 Identities=9% Similarity=-0.062 Sum_probs=51.9
Q ss_pred eEEEEECCC-ceeEEECCCCCCCCC-eeeEEEEECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCcce
Q 017755 221 MILAFDLKS-EKFYEVQQPHGMKGG-FCSQVGVLRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYY 298 (366)
Q Consensus 221 ~i~~fD~~~-e~~~~i~~P~~~~~~-~~~~l~~~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 298 (366)
.|..+|+.+ .+...+..+...... ..... -.+..|++...........||..+-. ..+...+..-....... .
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~--~g~~~~~~~~~~~~~~~--~ 338 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLA--SNQQRVLAHETSPTWVP--L 338 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETT--TCCEEEEEEEECSSCCC--C
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECC--CCceEEEEEcCCCCcCC--c
Confidence 788889988 777666554211111 12333 33445666655444336777777642 23344433322211100 0
Q ss_pred eEEEEEEeCCCeEEEEEcCC--eEEEEECCCC
Q 017755 299 TEAFAFSKDGDKALIYQHSR--CLHWYNLKDH 328 (366)
Q Consensus 299 ~~~~~~~~~g~~i~l~~~~~--~l~~ydl~t~ 328 (366)
...+.+.++|+.++....++ .++.+|++++
T Consensus 339 ~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~ 370 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTGFQHLYRIDSKGK 370 (741)
T ss_dssp CSCCEECTTSCEEEEECTTSSCEEEEECSSSC
T ss_pred CCceEECCCCeEEEEecCCCccEEEEEcCCCC
Confidence 12356778888443333332 4777777655
No 286
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=22.28 E-value=4.6e+02 Score=24.05 Aligned_cols=60 Identities=8% Similarity=-0.042 Sum_probs=32.1
Q ss_pred ECCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCC-------CCc---ceeEEEEEEeCCCeEEEEE
Q 017755 252 LRGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLH-------ETC---YYTEAFAFSKDGDKALIYQ 315 (366)
Q Consensus 252 ~~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~-------~~~---~~~~~~~~~~~g~~i~l~~ 315 (366)
.+|+..++...... .+.+....+ .....++..|..... .+. ....-+.+.++|+.+++..
T Consensus 330 ~DGrfLYVSnrg~d-~VavfdV~d---~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 330 LDDKFLYLSLWGIG-EVRQYDISN---PFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEETTTT-EEEEEECSS---TTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCEEEEEeCCCC-EEEEEEecC---CCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 35654444443332 566655543 234666666655311 000 0234478888999888776
No 287
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=21.83 E-value=3.4e+02 Score=22.39 Aligned_cols=28 Identities=14% Similarity=0.163 Sum_probs=16.6
Q ss_pred eEECCeEEEEEeeCCCCCCcceEEEEECC-CceeEE
Q 017755 200 VFIAGALHWLAARGSVRTGQNMILAFDLK-SEKFYE 234 (366)
Q Consensus 200 v~~~G~lyw~~~~~~~~~~~~~i~~fD~~-~e~~~~ 234 (366)
+..+|.+|. +... ..+.+||.. +..|+.
T Consensus 104 ~~~~~~l~v-~t~~------~~l~~~d~~g~~~~~~ 132 (330)
T 3hxj_A 104 TIFEDILYV-TSMD------GHLYAINTDGTEKWRF 132 (330)
T ss_dssp EEETTEEEE-ECTT------SEEEEECTTSCEEEEE
T ss_pred eEECCEEEE-EecC------CEEEEEcCCCCEEEEE
Confidence 344777654 4333 379999998 334443
No 288
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=21.54 E-value=5.3e+02 Score=24.50 Aligned_cols=116 Identities=5% Similarity=0.020 Sum_probs=63.7
Q ss_pred ECCeEEEEEeeCCCCCCcceEEEEECCCce--------eEEECCCCCCCCCeeeEEEEECCEEEEEEecCCCCeEEEEEE
Q 017755 202 IAGALHWLAARGSVRTGQNMILAFDLKSEK--------FYEVQQPHGMKGGFCSQVGVLRGCLWINSYYHDEPRCDIWVM 273 (366)
Q Consensus 202 ~~G~lyw~~~~~~~~~~~~~i~~fD~~~e~--------~~~i~~P~~~~~~~~~~l~~~~G~L~~v~~~~~~~~l~iW~l 273 (366)
-+|.+-..+..+ ..|..+|+.++. ...++.....+......++-..+. ++....+ +.+.+|-+
T Consensus 139 PDG~~LAsgs~D------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D-~tVrlWd~ 209 (588)
T 2j04_A 139 PIESSIVVGNED------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN-NSVFSMTV 209 (588)
T ss_dssp SSSSCEEEEETT------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT-CCEEEECC
T ss_pred CCCCEEEEEcCC------CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC-CeEEEEEC
Confidence 467766666665 379999998874 233332222122345566666555 3333333 27999999
Q ss_pred eecCCCCCeeEEEEecCCCCCCcceeEEEEEEeCCCeEEEEEcCCeEEEEECCCCcEEEEEE
Q 017755 274 KEYGSQQSWSKLCSFSKMLHETCYYTEAFAFSKDGDKALIYQHSRCLHWYNLKDHKQDVIEI 335 (366)
Q Consensus 274 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~~v~~ 335 (366)
+.......|..+....... ..-+++. |+ .++...++.+..||+++++......
T Consensus 210 ~~~~~~~~~~tL~~~h~~~------V~svaFs--g~-~LASa~~~tIkLWd~~~~~~~~~~~ 262 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRK------ITDLKIV--DY-KVVLTCPGYVHKIDLKNYSISSLKT 262 (588)
T ss_dssp CSSSSCCCEEEEECCCSSC------CCCEEEE--TT-EEEEECSSEEEEEETTTTEEEEEEC
T ss_pred CCCccccceeeecccccCc------EEEEEEE--CC-EEEEEeCCeEEEEECCCCeEEEEEc
Confidence 8632111233321111111 2224454 45 4444445679999999998876654
No 289
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=21.53 E-value=3.6e+02 Score=22.64 Aligned_cols=94 Identities=10% Similarity=0.109 Sum_probs=49.4
Q ss_pred eEEEEECCCceeEEECCCCCCCCCeeeEEEEE-CCEEEEEEecCCCCeEEEEEEeecCCCCCeeEEEEecCCCCCCccee
Q 017755 221 MILAFDLKSEKFYEVQQPHGMKGGFCSQVGVL-RGCLWINSYYHDEPRCDIWVMKEYGSQQSWSKLCSFSKMLHETCYYT 299 (366)
Q Consensus 221 ~i~~fD~~~e~~~~i~~P~~~~~~~~~~l~~~-~G~L~~v~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 299 (366)
.|..+|...+.-..+..... ....+.-. +|++.+...... .+.||-+..... . ...+.... ..
T Consensus 195 ~i~iwd~~~~~~~~~~~h~~----~v~~~~~s~~g~~l~sgs~dg--~v~iwd~~~~~~-~----~~~~~~~~-----~v 258 (343)
T 2xzm_R 195 RLKVWNTNFQIRYTFKAHES----NVNHLSISPNGKYIATGGKDK--KLLIWDILNLTY-P----QREFDAGS-----TI 258 (343)
T ss_dssp EEEEEETTTEEEEEEECCSS----CEEEEEECTTSSEEEEEETTC--EEEEEESSCCSS-C----SEEEECSS-----CE
T ss_pred EEEEEcCCCceeEEEcCccc----cceEEEECCCCCEEEEEcCCC--eEEEEECCCCcc-c----ceeecCCC-----cE
Confidence 67888855443333322111 12223322 466544444333 799998853211 1 11111111 24
Q ss_pred EEEEEEeCCCeEEEEEcCCeEEEEECCCCcEE
Q 017755 300 EAFAFSKDGDKALIYQHSRCLHWYNLKDHKQD 331 (366)
Q Consensus 300 ~~~~~~~~g~~i~l~~~~~~l~~ydl~t~~~~ 331 (366)
.-+++.+++. ++....+..+.+||+.+++..
T Consensus 259 ~~v~~sp~~~-~la~~~d~~v~iw~~~~~~~~ 289 (343)
T 2xzm_R 259 NQIAFNPKLQ-WVAVGTDQGVKIFNLMTQSKA 289 (343)
T ss_dssp EEEEECSSSC-EEEEEESSCEEEEESSSCCSC
T ss_pred EEEEECCCCC-EEEEECCCCEEEEEeCCCCCC
Confidence 5577888887 444555556999999887643
Done!