Query 017760
Match_columns 366
No_of_seqs 239 out of 1988
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 03:11:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017760.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017760hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1430 C-3 sterol dehydrogena 100.0 4.8E-36 1E-40 282.1 23.5 243 9-264 2-352 (361)
2 COG1088 RfbB dTDP-D-glucose 4, 100.0 6.1E-28 1.3E-32 216.7 16.9 208 12-261 1-320 (340)
3 PRK15181 Vi polysaccharide bio 100.0 2.7E-27 5.9E-32 227.6 20.6 214 8-260 12-340 (348)
4 PF14934 DUF4499: Domain of un 99.9 3.7E-27 8E-32 178.7 9.6 85 275-362 2-91 (91)
5 KOG1429 dTDP-glucose 4-6-dehyd 99.9 2E-25 4.3E-30 198.9 19.4 207 9-264 25-337 (350)
6 PLN02206 UDP-glucuronate decar 99.9 1.9E-25 4.2E-30 220.4 19.2 145 71-263 280-428 (442)
7 PLN02166 dTDP-glucose 4,6-dehy 99.9 2.5E-25 5.5E-30 219.2 19.9 146 71-264 281-430 (436)
8 TIGR03466 HpnA hopanoid-associ 99.9 2.1E-24 4.5E-29 205.1 24.7 222 12-261 1-326 (328)
9 PLN00016 RNA-binding protein; 99.9 4.7E-25 1E-29 214.4 19.4 221 10-267 51-360 (378)
10 COG1087 GalE UDP-glucose 4-epi 99.9 7.1E-25 1.5E-29 197.9 18.3 202 12-259 1-323 (329)
11 PRK10217 dTDP-glucose 4,6-dehy 99.9 6.1E-25 1.3E-29 211.6 18.5 157 71-262 178-336 (355)
12 PRK11908 NAD-dependent epimera 99.9 1.2E-24 2.5E-29 209.2 18.7 162 71-262 167-340 (347)
13 PF01073 3Beta_HSD: 3-beta hyd 99.9 5.4E-25 1.2E-29 204.9 15.6 165 15-183 1-279 (280)
14 PLN02695 GDP-D-mannose-3',5'-e 99.9 3.2E-24 7E-29 207.8 21.3 147 71-266 185-338 (370)
15 PLN02427 UDP-apiose/xylose syn 99.9 3.2E-24 6.8E-29 209.1 20.1 157 71-261 200-372 (386)
16 TIGR02622 CDP_4_6_dhtase CDP-g 99.9 2.6E-24 5.7E-29 206.9 19.0 153 72-264 178-335 (349)
17 PRK08125 bifunctional UDP-gluc 99.9 3.5E-24 7.6E-29 222.1 19.9 162 71-262 481-654 (660)
18 KOG0747 Putative NAD+-dependen 99.9 2.2E-24 4.7E-29 192.3 15.6 153 68-261 172-326 (331)
19 TIGR01472 gmd GDP-mannose 4,6- 99.9 8E-24 1.7E-28 203.1 18.8 162 71-259 174-341 (343)
20 PLN02260 probable rhamnose bio 99.9 1.9E-23 4.1E-28 217.2 19.5 146 71-262 177-324 (668)
21 PLN02572 UDP-sulfoquinovose sy 99.9 2E-23 4.4E-28 206.4 17.8 152 72-269 247-425 (442)
22 PLN02653 GDP-mannose 4,6-dehyd 99.9 6.2E-23 1.3E-27 196.6 20.6 146 71-261 180-332 (340)
23 PLN02240 UDP-glucose 4-epimera 99.9 1.1E-22 2.3E-27 195.7 22.0 151 71-263 175-344 (352)
24 TIGR01181 dTDP_gluc_dehyt dTDP 99.9 6E-23 1.3E-27 193.9 18.9 145 71-261 168-314 (317)
25 PRK10084 dTDP-glucose 4,6 dehy 99.9 7.5E-23 1.6E-27 196.8 19.2 152 71-261 185-338 (352)
26 CHL00194 ycf39 Ycf39; Provisio 99.9 1.8E-22 4E-27 191.6 16.6 221 12-259 1-301 (317)
27 PLN02214 cinnamoyl-CoA reducta 99.9 8.6E-22 1.9E-26 189.0 17.4 201 9-263 8-322 (342)
28 PRK10675 UDP-galactose-4-epime 99.9 2.2E-21 4.8E-26 185.5 19.7 146 72-262 169-334 (338)
29 TIGR02197 heptose_epim ADP-L-g 99.9 1.9E-21 4.1E-26 183.8 18.0 144 71-258 158-313 (314)
30 COG0451 WcaG Nucleoside-diphos 99.9 3.6E-21 7.8E-26 181.6 19.0 144 72-261 161-312 (314)
31 PLN00198 anthocyanidin reducta 99.9 2.7E-21 6E-26 185.1 16.9 141 71-261 186-334 (338)
32 PRK05865 hypothetical protein; 99.9 3E-21 6.4E-26 201.0 18.2 197 12-260 1-259 (854)
33 PLN02989 cinnamyl-alcohol dehy 99.9 8.8E-21 1.9E-25 180.5 20.1 137 72-261 183-323 (325)
34 PRK09987 dTDP-4-dehydrorhamnos 99.9 4.9E-21 1.1E-25 180.4 15.8 143 72-257 143-293 (299)
35 PLN02662 cinnamyl-alcohol dehy 99.9 1.8E-20 3.9E-25 177.9 19.2 137 72-262 181-320 (322)
36 PRK11150 rfaD ADP-L-glycero-D- 99.9 8.9E-21 1.9E-25 179.1 16.7 143 70-258 157-307 (308)
37 TIGR01179 galE UDP-glucose-4-e 99.9 2.5E-20 5.3E-25 176.7 19.2 146 71-260 164-328 (328)
38 PLN02896 cinnamyl-alcohol dehy 99.9 2.1E-20 4.6E-25 180.0 17.4 143 71-262 194-344 (353)
39 PLN02650 dihydroflavonol-4-red 99.8 3.4E-20 7.4E-25 178.5 17.6 141 72-263 182-325 (351)
40 PLN02725 GDP-4-keto-6-deoxyman 99.8 1.6E-20 3.5E-25 176.8 13.8 145 71-263 148-303 (306)
41 TIGR01214 rmlD dTDP-4-dehydror 99.8 2E-20 4.4E-25 174.7 14.0 146 72-255 139-285 (287)
42 PLN02986 cinnamyl-alcohol dehy 99.8 1.2E-19 2.5E-24 172.6 18.3 137 71-261 181-320 (322)
43 PRK07201 short chain dehydroge 99.8 1.2E-19 2.7E-24 188.5 19.8 175 70-261 165-355 (657)
44 KOG1502 Flavonol reductase/cin 99.8 1E-19 2.2E-24 168.6 16.8 200 10-261 5-324 (327)
45 COG1090 Predicted nucleoside-d 99.8 1.7E-19 3.7E-24 161.4 17.3 200 14-255 1-295 (297)
46 TIGR03589 PseB UDP-N-acetylglu 99.8 2.1E-19 4.5E-24 171.2 16.2 191 9-251 2-284 (324)
47 TIGR01777 yfcH conserved hypot 99.8 6.2E-19 1.4E-23 164.7 17.4 139 71-250 153-292 (292)
48 COG1089 Gmd GDP-D-mannose dehy 99.8 1.7E-18 3.6E-23 154.9 18.1 223 11-261 2-342 (345)
49 PLN02686 cinnamoyl-CoA reducta 99.8 1.6E-18 3.4E-23 167.9 13.1 127 72-245 235-361 (367)
50 PLN02657 3,8-divinyl protochlo 99.8 2.5E-17 5.3E-22 160.7 20.4 176 9-201 58-324 (390)
51 KOG1371 UDP-glucose 4-epimeras 99.8 4.1E-18 8.8E-23 155.7 13.7 207 11-263 2-338 (343)
52 PF04321 RmlD_sub_bind: RmlD s 99.8 2.9E-19 6.3E-24 167.2 5.8 204 12-257 1-285 (286)
53 KOG1431 GDP-L-fucose synthetas 99.8 1.2E-17 2.7E-22 144.6 13.7 148 68-263 151-312 (315)
54 PF01370 Epimerase: NAD depend 99.7 2E-17 4.3E-22 149.6 10.2 129 14-155 1-236 (236)
55 TIGR03649 ergot_EASG ergot alk 99.7 5E-16 1.1E-20 145.1 14.0 159 13-187 1-227 (285)
56 COG1091 RfbD dTDP-4-dehydrorha 99.7 4.6E-16 1E-20 142.3 12.9 142 70-256 137-279 (281)
57 PRK12320 hypothetical protein; 99.6 4.5E-15 9.8E-20 152.1 16.4 136 12-172 1-202 (699)
58 TIGR01746 Thioester-redct thio 99.6 5E-15 1.1E-19 142.4 14.5 104 72-190 183-295 (367)
59 PLN02583 cinnamoyl-CoA reducta 99.6 8.1E-15 1.7E-19 138.0 14.9 83 72-174 182-264 (297)
60 PLN02996 fatty acyl-CoA reduct 99.6 6E-15 1.3E-19 147.8 14.2 98 72-177 253-361 (491)
61 KOG2865 NADH:ubiquinone oxidor 99.6 2.1E-14 4.6E-19 128.7 12.8 222 12-255 62-367 (391)
62 KOG1372 GDP-mannose 4,6 dehydr 99.5 3.5E-13 7.6E-18 118.6 14.9 135 92-256 228-365 (376)
63 PLN02778 3,5-epimerase/4-reduc 99.5 1.3E-12 2.9E-17 123.0 18.6 133 75-259 158-293 (298)
64 PLN02503 fatty acyl-CoA reduct 99.4 2E-12 4.3E-17 131.3 12.6 96 72-175 367-474 (605)
65 COG1086 Predicted nucleoside-d 99.4 1.4E-11 3.1E-16 120.8 15.3 155 8-176 247-498 (588)
66 PF02719 Polysacc_synt_2: Poly 99.3 8.7E-12 1.9E-16 115.0 8.5 149 14-176 1-250 (293)
67 COG0702 Predicted nucleoside-d 99.3 7E-11 1.5E-15 109.1 13.2 152 12-183 1-228 (275)
68 TIGR03443 alpha_am_amid L-amin 99.2 3.6E-10 7.9E-15 127.1 16.9 102 72-187 1168-1276(1389)
69 PF13460 NAD_binding_10: NADH( 99.1 1.4E-10 2.9E-15 101.0 7.9 101 14-132 1-182 (183)
70 PRK09135 pteridine reductase; 99.1 6.1E-10 1.3E-14 101.3 12.0 37 9-46 4-40 (249)
71 PF05368 NmrA: NmrA-like famil 99.1 1.7E-11 3.7E-16 111.1 1.6 149 14-177 1-229 (233)
72 PLN00141 Tic62-NAD(P)-related 99.1 6.8E-10 1.5E-14 101.8 11.8 40 7-47 13-52 (251)
73 PLN02260 probable rhamnose bio 99.1 5.8E-10 1.3E-14 116.4 12.1 96 116-255 564-659 (668)
74 KOG3019 Predicted nucleoside-d 99.0 2.1E-09 4.5E-14 93.9 10.6 103 70-187 169-271 (315)
75 PRK12825 fabG 3-ketoacyl-(acyl 99.0 3.4E-09 7.3E-14 96.1 10.7 72 71-160 177-248 (249)
76 PRK12429 3-hydroxybutyrate deh 99.0 7.8E-10 1.7E-14 101.2 6.2 39 9-48 2-40 (258)
77 PRK13394 3-hydroxybutyrate deh 99.0 1.3E-09 2.9E-14 100.0 7.4 38 9-47 5-42 (262)
78 PRK05653 fabG 3-ketoacyl-(acyl 98.9 6.9E-09 1.5E-13 94.0 11.5 39 8-47 2-40 (246)
79 PF07993 NAD_binding_4: Male s 98.9 6.6E-10 1.4E-14 101.9 4.6 57 71-127 186-249 (249)
80 PRK06482 short chain dehydroge 98.9 4.1E-09 8.8E-14 97.8 9.9 82 71-174 169-263 (276)
81 KOG1221 Acyl-CoA reductase [Li 98.9 4.8E-09 1E-13 102.3 10.3 101 68-174 221-332 (467)
82 TIGR01963 PHB_DH 3-hydroxybuty 98.9 1.5E-09 3.3E-14 99.1 6.5 36 11-47 1-36 (255)
83 PRK12826 3-ketoacyl-(acyl-carr 98.9 5E-09 1.1E-13 95.4 9.7 37 9-46 4-40 (251)
84 PRK07074 short chain dehydroge 98.9 4.2E-09 9.1E-14 96.6 8.9 82 72-171 170-254 (257)
85 PRK07067 sorbitol dehydrogenas 98.9 4.1E-09 8.9E-14 96.7 7.4 38 9-47 4-41 (257)
86 PRK08263 short chain dehydroge 98.8 2.7E-09 5.8E-14 99.1 4.6 37 10-47 2-38 (275)
87 PRK05875 short chain dehydroge 98.8 3.8E-08 8.2E-13 91.3 11.7 37 9-46 5-41 (276)
88 KOG2774 NAD dependent epimeras 98.8 1.3E-07 2.8E-12 83.2 14.1 207 9-259 42-352 (366)
89 PRK12829 short chain dehydroge 98.8 4.1E-09 9E-14 96.8 5.1 38 8-46 8-45 (264)
90 PRK05876 short chain dehydroge 98.8 3.7E-08 8E-13 91.6 9.5 39 8-47 3-41 (275)
91 PRK12828 short chain dehydroge 98.7 4.2E-08 9.1E-13 88.5 9.4 38 9-47 5-42 (239)
92 PRK12823 benD 1,6-dihydroxycyc 98.7 1.1E-07 2.4E-12 87.3 11.3 37 9-46 6-42 (260)
93 PRK12745 3-ketoacyl-(acyl-carr 98.7 1.4E-07 3E-12 86.3 11.5 35 12-47 3-37 (256)
94 PRK06914 short chain dehydroge 98.7 1.1E-07 2.3E-12 88.5 9.5 37 10-47 2-38 (280)
95 PRK06077 fabG 3-ketoacyl-(acyl 98.7 1.1E-07 2.4E-12 86.7 9.4 37 9-46 4-40 (252)
96 PRK07806 short chain dehydroge 98.6 1.5E-07 3.2E-12 85.8 9.5 38 9-47 4-41 (248)
97 PRK07523 gluconate 5-dehydroge 98.6 1.2E-07 2.7E-12 86.8 8.9 38 9-47 8-45 (255)
98 PRK05557 fabG 3-ketoacyl-(acyl 98.6 4.1E-07 8.8E-12 82.4 12.0 38 9-47 3-40 (248)
99 PRK12935 acetoacetyl-CoA reduc 98.6 2.7E-07 5.8E-12 84.0 10.8 36 9-45 4-39 (247)
100 PRK12384 sorbitol-6-phosphate 98.6 5.6E-08 1.2E-12 89.2 6.2 36 11-47 2-37 (259)
101 PRK07774 short chain dehydroge 98.6 4E-07 8.6E-12 83.0 11.4 38 9-47 4-41 (250)
102 PRK08324 short chain dehydroge 98.6 1.8E-07 4E-12 97.9 9.9 38 9-47 420-457 (681)
103 PLN03209 translocon at the inn 98.6 2.5E-07 5.3E-12 93.1 10.4 39 8-47 77-115 (576)
104 PRK07890 short chain dehydroge 98.6 2.2E-07 4.7E-12 85.1 9.2 38 9-47 3-40 (258)
105 PRK07775 short chain dehydroge 98.6 2.8E-07 6.1E-12 85.5 9.9 37 9-46 8-44 (274)
106 COG3320 Putative dehydrogenase 98.6 5.1E-08 1.1E-12 92.0 4.9 54 12-65 1-68 (382)
107 PRK06138 short chain dehydroge 98.5 1.6E-07 3.4E-12 85.6 6.8 38 9-47 3-40 (252)
108 PRK07231 fabG 3-ketoacyl-(acyl 98.5 5.8E-07 1.3E-11 81.8 10.5 38 9-47 3-40 (251)
109 PRK06180 short chain dehydroge 98.5 3.1E-07 6.8E-12 85.3 8.8 38 9-47 2-39 (277)
110 PRK06182 short chain dehydroge 98.5 2.6E-07 5.7E-12 85.6 7.0 53 10-65 2-54 (273)
111 PRK08220 2,3-dihydroxybenzoate 98.5 8.7E-07 1.9E-11 80.8 9.6 37 9-46 6-42 (252)
112 PRK06123 short chain dehydroge 98.4 1.6E-06 3.5E-11 78.8 11.0 35 11-46 2-36 (248)
113 PRK08219 short chain dehydroge 98.4 5.5E-07 1.2E-11 80.6 7.7 36 10-47 2-37 (227)
114 PRK12746 short chain dehydroge 98.4 1.3E-06 2.8E-11 79.9 10.2 34 9-43 4-37 (254)
115 PRK07060 short chain dehydroge 98.4 1.2E-06 2.7E-11 79.4 9.9 37 9-46 7-43 (245)
116 PRK06194 hypothetical protein; 98.4 1.3E-06 2.8E-11 81.5 10.1 56 9-65 4-63 (287)
117 PRK12939 short chain dehydroge 98.4 2E-06 4.3E-11 78.2 11.0 38 9-47 5-42 (250)
118 PRK06701 short chain dehydroge 98.4 9E-07 1.9E-11 83.0 8.9 39 8-47 43-81 (290)
119 PRK08217 fabG 3-ketoacyl-(acyl 98.4 1.6E-06 3.4E-11 78.9 10.3 37 9-46 3-39 (253)
120 PRK09134 short chain dehydroge 98.4 2.6E-06 5.7E-11 78.1 11.8 36 10-46 8-43 (258)
121 TIGR03206 benzo_BadH 2-hydroxy 98.4 1.7E-06 3.7E-11 78.7 10.3 37 10-47 2-38 (250)
122 PRK12827 short chain dehydroge 98.4 3.3E-06 7.1E-11 76.6 11.8 35 10-45 5-39 (249)
123 COG2910 Putative NADH-flavin r 98.4 1.6E-06 3.5E-11 73.8 8.8 108 12-132 1-198 (211)
124 PRK06128 oxidoreductase; Provi 98.4 3.5E-06 7.6E-11 79.3 12.2 37 9-46 53-89 (300)
125 PRK08063 enoyl-(acyl carrier p 98.4 2.3E-06 5E-11 77.9 9.8 36 9-45 2-38 (250)
126 PRK06500 short chain dehydroge 98.4 3.7E-06 8.1E-11 76.4 11.1 37 9-46 4-40 (249)
127 PRK09730 putative NAD(P)-bindi 98.3 3E-06 6.5E-11 76.9 9.8 32 11-43 1-32 (247)
128 PRK06523 short chain dehydroge 98.3 7.4E-06 1.6E-10 75.1 12.3 39 8-47 6-44 (260)
129 PRK08213 gluconate 5-dehydroge 98.3 7.1E-06 1.5E-10 75.2 11.6 39 8-47 9-47 (259)
130 PRK08628 short chain dehydroge 98.3 1.7E-06 3.7E-11 79.3 7.4 39 9-48 5-43 (258)
131 PRK05565 fabG 3-ketoacyl-(acyl 98.3 4.7E-06 1E-10 75.5 10.0 37 9-46 3-40 (247)
132 PRK12824 acetoacetyl-CoA reduc 98.3 5.7E-06 1.2E-10 74.9 9.9 34 12-46 3-36 (245)
133 PRK09186 flagellin modificatio 98.3 3.8E-06 8.3E-11 76.7 8.8 38 9-47 2-39 (256)
134 PRK06841 short chain dehydroge 98.3 6.6E-06 1.4E-10 75.2 10.3 38 9-47 13-50 (255)
135 PRK12743 oxidoreductase; Provi 98.3 9E-06 2E-10 74.5 11.1 35 11-46 2-36 (256)
136 PRK07326 short chain dehydroge 98.2 5.3E-06 1.1E-10 74.9 9.4 56 9-65 4-62 (237)
137 PRK06057 short chain dehydroge 98.2 3.4E-06 7.4E-11 77.2 7.6 38 9-47 5-42 (255)
138 PLN02253 xanthoxin dehydrogena 98.2 3.8E-06 8.2E-11 78.0 7.8 38 8-46 15-52 (280)
139 TIGR01830 3oxo_ACP_reduc 3-oxo 98.2 7E-06 1.5E-10 74.0 9.3 32 14-46 1-32 (239)
140 PRK12936 3-ketoacyl-(acyl-carr 98.2 1.2E-05 2.6E-10 72.8 10.8 37 9-46 4-40 (245)
141 PRK07825 short chain dehydroge 98.2 5.3E-06 1.1E-10 76.8 8.0 38 9-47 3-40 (273)
142 PRK12744 short chain dehydroge 98.2 1.8E-05 3.8E-10 72.6 11.3 37 9-46 6-42 (257)
143 TIGR01832 kduD 2-deoxy-D-gluco 98.2 1.9E-05 4.2E-10 71.7 11.1 37 9-46 3-39 (248)
144 PRK05717 oxidoreductase; Valid 98.1 2E-05 4.3E-10 72.1 11.1 39 8-47 7-45 (255)
145 PRK07856 short chain dehydroge 98.1 2.7E-05 5.9E-10 71.1 11.9 39 8-47 3-41 (252)
146 PRK08017 oxidoreductase; Provi 98.1 5.8E-06 1.3E-10 75.5 7.1 35 12-47 3-37 (256)
147 PRK06124 gluconate 5-dehydroge 98.1 2E-05 4.4E-10 72.0 10.3 39 8-47 8-46 (256)
148 PRK06550 fabG 3-ketoacyl-(acyl 98.1 5.6E-05 1.2E-09 68.1 13.0 38 9-47 3-40 (235)
149 PRK07577 short chain dehydroge 98.1 4.8E-05 1E-09 68.4 12.5 38 10-48 2-39 (234)
150 PRK07985 oxidoreductase; Provi 98.1 3.9E-05 8.4E-10 72.1 12.0 37 9-46 47-83 (294)
151 PRK06113 7-alpha-hydroxysteroi 98.1 3.5E-05 7.5E-10 70.5 11.2 46 1-47 1-46 (255)
152 PRK12938 acetyacetyl-CoA reduc 98.1 4.2E-05 9.1E-10 69.4 11.5 34 10-44 2-35 (246)
153 PRK06198 short chain dehydroge 98.1 3.1E-05 6.7E-10 70.9 10.4 37 9-46 4-41 (260)
154 PRK05650 short chain dehydroge 98.1 3.6E-05 7.9E-10 71.1 10.9 35 12-47 1-35 (270)
155 PRK05786 fabG 3-ketoacyl-(acyl 98.0 2.2E-05 4.9E-10 70.8 9.0 38 9-47 3-40 (238)
156 PRK08226 short chain dehydroge 98.0 4.4E-05 9.6E-10 70.1 11.0 37 9-46 4-40 (263)
157 PRK06114 short chain dehydroge 98.0 6.7E-05 1.5E-09 68.6 12.1 39 8-47 5-43 (254)
158 PRK06181 short chain dehydroge 98.0 2.1E-05 4.4E-10 72.3 8.5 35 11-46 1-35 (263)
159 PRK08642 fabG 3-ketoacyl-(acyl 98.0 5.7E-05 1.2E-09 68.8 11.0 36 9-45 3-38 (253)
160 PRK10538 malonic semialdehyde 98.0 2.4E-05 5.1E-10 71.4 8.5 35 12-47 1-35 (248)
161 PRK08085 gluconate 5-dehydroge 98.0 3.6E-05 7.8E-10 70.3 9.7 38 9-47 7-44 (254)
162 PRK12937 short chain dehydroge 98.0 5.3E-05 1.1E-09 68.6 10.5 37 9-46 3-39 (245)
163 TIGR01829 AcAcCoA_reduct aceto 98.0 4.8E-05 1E-09 68.7 10.1 33 12-45 1-33 (242)
164 PRK09291 short chain dehydroge 98.0 1.5E-05 3.3E-10 72.8 6.9 35 11-46 2-36 (257)
165 PRK08643 acetoin reductase; Va 98.0 2.6E-05 5.6E-10 71.3 8.4 36 11-47 2-37 (256)
166 PRK07666 fabG 3-ketoacyl-(acyl 98.0 3.2E-05 6.9E-10 70.0 8.8 38 9-47 5-42 (239)
167 KOG4288 Predicted oxidoreducta 97.9 2.5E-05 5.5E-10 68.9 6.7 118 11-132 52-261 (283)
168 TIGR02632 RhaD_aldol-ADH rhamn 97.9 4.9E-05 1.1E-09 79.5 9.9 38 9-47 412-449 (676)
169 PRK06935 2-deoxy-D-gluconate 3 97.9 0.00011 2.4E-09 67.4 11.0 56 9-65 13-71 (258)
170 PRK08589 short chain dehydroge 97.9 4.4E-05 9.6E-10 70.7 8.3 36 9-45 4-39 (272)
171 PRK07063 short chain dehydroge 97.9 7.5E-05 1.6E-09 68.5 9.3 38 9-47 5-42 (260)
172 PRK06172 short chain dehydroge 97.8 0.00012 2.7E-09 66.7 10.3 38 9-47 5-42 (253)
173 PRK09242 tropinone reductase; 97.8 0.00014 3E-09 66.5 10.5 37 9-46 7-43 (257)
174 PRK07097 gluconate 5-dehydroge 97.8 0.00014 3E-09 67.0 10.3 38 9-47 8-45 (265)
175 PRK08339 short chain dehydroge 97.8 6.6E-05 1.4E-09 69.2 8.2 38 9-47 6-43 (263)
176 PRK06463 fabG 3-ketoacyl-(acyl 97.8 0.00022 4.7E-09 65.2 11.4 37 9-46 5-41 (255)
177 PRK08264 short chain dehydroge 97.8 4.8E-05 1E-09 68.7 6.3 54 9-65 4-57 (238)
178 PRK06179 short chain dehydroge 97.8 4.8E-05 1E-09 70.2 6.4 52 9-65 2-53 (270)
179 PRK07069 short chain dehydroge 97.7 0.00017 3.7E-09 65.5 9.5 32 13-45 1-32 (251)
180 PRK07023 short chain dehydroge 97.7 5.2E-05 1.1E-09 68.8 6.1 53 11-65 1-53 (243)
181 PF13950 Epimerase_Csub: UDP-g 97.7 3.2E-05 6.9E-10 54.8 3.6 36 228-263 26-61 (62)
182 PRK07109 short chain dehydroge 97.7 0.00018 3.9E-09 68.9 9.7 38 9-47 6-43 (334)
183 PRK07831 short chain dehydroge 97.7 0.00035 7.7E-09 64.1 11.2 38 9-47 15-53 (262)
184 PRK07677 short chain dehydroge 97.7 0.0004 8.6E-09 63.4 11.2 36 11-47 1-36 (252)
185 PRK12748 3-ketoacyl-(acyl-carr 97.7 0.00042 9.1E-09 63.4 11.2 36 9-45 3-40 (256)
186 PRK07041 short chain dehydroge 97.7 0.00013 2.7E-09 65.6 7.4 50 15-65 1-53 (230)
187 PRK06101 short chain dehydroge 97.6 4.5E-05 9.7E-10 69.2 4.0 54 11-65 1-54 (240)
188 PRK07102 short chain dehydroge 97.6 4.5E-05 9.8E-10 69.2 4.0 54 11-65 1-59 (243)
189 PRK05993 short chain dehydroge 97.6 6.8E-05 1.5E-09 69.7 4.9 52 11-65 4-55 (277)
190 PRK06398 aldose dehydrogenase; 97.6 0.00015 3.2E-09 66.7 7.0 49 9-65 4-52 (258)
191 PRK08267 short chain dehydroge 97.6 6.9E-05 1.5E-09 68.7 4.8 54 11-65 1-56 (260)
192 PRK06139 short chain dehydroge 97.6 0.00028 6.1E-09 67.4 9.0 38 9-47 5-42 (330)
193 KOG1203 Predicted dehydrogenas 97.6 0.00033 7.1E-09 67.8 9.2 42 6-48 74-115 (411)
194 PRK08265 short chain dehydroge 97.6 0.0001 2.2E-09 67.8 5.2 56 9-65 4-60 (261)
195 PRK06924 short chain dehydroge 97.6 0.00012 2.6E-09 66.6 5.6 54 11-65 1-56 (251)
196 PRK09072 short chain dehydroge 97.5 9.5E-05 2.1E-09 67.9 4.6 56 9-65 3-61 (263)
197 PRK08936 glucose-1-dehydrogena 97.5 0.0011 2.3E-08 60.9 11.3 37 9-46 5-41 (261)
198 PRK05693 short chain dehydroge 97.5 8.6E-05 1.9E-09 68.7 4.1 52 11-65 1-52 (274)
199 PRK08945 putative oxoacyl-(acy 97.5 0.00013 2.9E-09 66.3 5.2 40 7-47 8-47 (247)
200 PRK06196 oxidoreductase; Provi 97.5 8.2E-05 1.8E-09 70.5 3.9 56 9-65 24-79 (315)
201 COG0300 DltE Short-chain dehyd 97.5 0.00023 5E-09 65.2 6.4 58 7-65 2-64 (265)
202 PRK07814 short chain dehydroge 97.5 0.00012 2.5E-09 67.5 4.5 56 9-65 8-67 (263)
203 TIGR02415 23BDH acetoin reduct 97.5 0.00028 6E-09 64.3 6.8 34 12-46 1-34 (254)
204 TIGR03325 BphB_TodD cis-2,3-di 97.5 0.00016 3.4E-09 66.5 5.1 56 9-65 3-59 (262)
205 PRK12742 oxidoreductase; Provi 97.4 0.00015 3.2E-09 65.4 4.5 37 9-46 4-40 (237)
206 PRK06953 short chain dehydroge 97.4 0.00017 3.8E-09 64.5 4.7 52 11-65 1-52 (222)
207 PRK08177 short chain dehydroge 97.4 0.00024 5.3E-09 63.6 5.7 53 11-65 1-53 (225)
208 PRK07024 short chain dehydroge 97.4 0.00016 3.5E-09 66.3 4.3 54 11-65 2-58 (257)
209 PRK07904 short chain dehydroge 97.4 0.00029 6.2E-09 64.6 6.0 56 10-65 7-68 (253)
210 PRK06484 short chain dehydroge 97.4 0.001 2.2E-08 67.5 10.4 36 10-46 268-303 (520)
211 PRK12367 short chain dehydroge 97.4 0.00029 6.2E-09 64.4 5.7 38 8-46 11-48 (245)
212 PRK06171 sorbitol-6-phosphate 97.4 0.00044 9.6E-09 63.6 7.0 51 9-65 7-57 (266)
213 PRK07454 short chain dehydroge 97.4 0.0002 4.2E-09 64.8 4.5 55 10-65 5-63 (241)
214 PRK06200 2,3-dihydroxy-2,3-dih 97.4 0.00022 4.8E-09 65.5 4.8 57 8-65 3-60 (263)
215 PRK06483 dihydromonapterin red 97.3 0.0003 6.5E-09 63.4 5.3 53 11-65 2-54 (236)
216 PRK08703 short chain dehydroge 97.3 0.00031 6.7E-09 63.5 5.4 39 8-47 3-41 (239)
217 PRK08993 2-deoxy-D-gluconate 3 97.3 0.00034 7.3E-09 64.0 5.4 63 1-65 1-65 (253)
218 PRK08278 short chain dehydroge 97.3 0.00037 8E-09 64.6 5.7 38 9-47 4-41 (273)
219 PRK07478 short chain dehydroge 97.3 0.00029 6.2E-09 64.4 4.9 56 9-65 4-63 (254)
220 PRK06197 short chain dehydroge 97.3 0.00033 7.1E-09 66.1 5.3 56 9-65 14-75 (306)
221 PRK12481 2-deoxy-D-gluconate 3 97.3 0.00031 6.8E-09 64.2 4.7 56 9-65 6-63 (251)
222 PRK06949 short chain dehydroge 97.3 0.00031 6.7E-09 64.1 4.7 56 9-65 7-66 (258)
223 PRK05866 short chain dehydroge 97.2 0.00053 1.1E-08 64.4 5.9 56 9-65 38-97 (293)
224 PRK08251 short chain dehydroge 97.2 0.00033 7.1E-09 63.6 4.3 54 11-65 2-61 (248)
225 PRK08277 D-mannonate oxidoredu 97.2 0.00042 9E-09 64.2 5.0 57 8-65 7-67 (278)
226 COG4221 Short-chain alcohol de 97.2 0.0038 8.3E-08 56.1 10.3 38 9-47 4-41 (246)
227 PRK07453 protochlorophyllide o 97.1 0.00068 1.5E-08 64.4 5.6 56 9-65 4-63 (322)
228 PRK06947 glucose-1-dehydrogena 97.1 0.00063 1.4E-08 61.7 5.0 54 11-65 2-60 (248)
229 PRK07035 short chain dehydroge 97.1 0.00072 1.6E-08 61.5 5.4 56 9-65 6-65 (252)
230 PRK05867 short chain dehydroge 97.1 0.00058 1.3E-08 62.3 4.6 56 9-65 7-66 (253)
231 PRK07576 short chain dehydroge 97.1 0.00086 1.9E-08 61.7 5.7 56 9-65 7-66 (264)
232 PRK05854 short chain dehydroge 97.1 0.00067 1.4E-08 64.3 4.8 57 8-65 11-73 (313)
233 PRK07792 fabG 3-ketoacyl-(acyl 97.0 0.001 2.2E-08 62.8 5.8 57 8-65 9-70 (306)
234 PRK09620 hypothetical protein; 97.0 0.0018 3.8E-08 58.6 6.8 35 10-45 2-52 (229)
235 PRK08416 7-alpha-hydroxysteroi 97.0 0.001 2.2E-08 61.0 5.0 57 8-65 5-67 (260)
236 PRK08261 fabG 3-ketoacyl-(acyl 96.9 0.0036 7.8E-08 62.4 8.9 37 9-46 208-244 (450)
237 PRK07424 bifunctional sterol d 96.9 0.0013 2.7E-08 64.6 5.3 38 9-47 176-213 (406)
238 PRK09009 C factor cell-cell si 96.9 0.0023 5E-08 57.6 6.5 50 12-65 1-51 (235)
239 PRK08309 short chain dehydroge 96.9 0.00099 2.2E-08 57.8 3.9 33 12-46 1-33 (177)
240 PRK12747 short chain dehydroge 96.9 0.0015 3.2E-08 59.5 5.3 36 9-45 2-37 (252)
241 KOG4039 Serine/threonine kinas 96.8 0.0031 6.6E-08 53.7 6.1 44 5-48 12-56 (238)
242 smart00822 PKS_KR This enzymat 96.8 0.0031 6.8E-08 53.2 6.4 36 12-47 1-36 (180)
243 COG3967 DltE Short-chain dehyd 96.8 0.0012 2.6E-08 57.6 3.5 57 8-65 2-58 (245)
244 PRK07062 short chain dehydroge 96.8 0.0019 4.1E-08 59.3 5.1 56 9-65 6-67 (265)
245 PRK06079 enoyl-(acyl carrier p 96.7 0.0023 5.1E-08 58.5 5.1 56 9-65 5-63 (252)
246 PRK05872 short chain dehydroge 96.7 0.0029 6.2E-08 59.4 5.8 38 9-47 7-44 (296)
247 PRK06125 short chain dehydroge 96.7 0.0024 5.3E-08 58.4 5.2 56 9-65 5-65 (259)
248 PF00106 adh_short: short chai 96.6 0.002 4.4E-08 54.5 4.0 73 12-84 1-92 (167)
249 PRK05884 short chain dehydroge 96.6 0.0027 5.8E-08 57.0 4.9 52 12-65 1-52 (223)
250 KOG1201 Hydroxysteroid 17-beta 96.6 0.0041 8.8E-08 57.5 6.0 57 8-65 35-94 (300)
251 TIGR01831 fabG_rel 3-oxoacyl-( 96.6 0.0021 4.5E-08 58.0 4.1 51 14-65 1-56 (239)
252 PRK05855 short chain dehydroge 96.5 0.0026 5.7E-08 65.0 4.8 57 8-65 312-372 (582)
253 PRK08340 glucose-1-dehydrogena 96.5 0.0032 7E-08 57.6 4.7 53 12-65 1-56 (259)
254 TIGR02685 pter_reduc_Leis pter 96.5 0.0039 8.5E-08 57.4 5.3 34 12-46 2-35 (267)
255 PLN02780 ketoreductase/ oxidor 96.5 0.004 8.7E-08 59.2 5.4 37 10-47 52-88 (320)
256 PRK07832 short chain dehydroge 96.5 0.0036 7.7E-08 57.8 4.8 34 12-46 1-34 (272)
257 PRK06720 hypothetical protein; 96.4 0.0061 1.3E-07 52.4 5.7 38 9-47 14-51 (169)
258 PRK07201 short chain dehydroge 96.4 0.0033 7.2E-08 65.6 4.3 56 9-65 369-428 (657)
259 PRK07791 short chain dehydroge 96.4 0.0061 1.3E-07 56.9 5.6 37 9-46 4-40 (286)
260 PRK07889 enoyl-(acyl carrier p 96.3 0.0048 1E-07 56.5 4.7 56 9-65 5-65 (256)
261 PRK08303 short chain dehydroge 96.2 0.0078 1.7E-07 56.9 5.6 37 9-46 6-42 (305)
262 KOG1205 Predicted dehydrogenas 96.2 0.0065 1.4E-07 56.3 4.7 78 6-84 7-103 (282)
263 KOG1200 Mitochondrial/plastidi 96.2 0.018 3.9E-07 50.0 6.9 40 9-49 12-51 (256)
264 PRK14982 acyl-ACP reductase; P 96.2 0.007 1.5E-07 57.8 4.9 38 9-46 153-191 (340)
265 PRK06732 phosphopantothenate-- 96.1 0.014 3.1E-07 52.7 6.3 28 18-46 23-50 (229)
266 PRK08594 enoyl-(acyl carrier p 96.0 0.015 3.3E-07 53.2 6.5 56 9-65 5-67 (257)
267 PRK07984 enoyl-(acyl carrier p 96.0 0.01 2.2E-07 54.7 5.1 56 9-65 4-64 (262)
268 PRK08862 short chain dehydroge 96.0 0.011 2.4E-07 53.2 5.1 38 9-47 3-40 (227)
269 PRK06484 short chain dehydroge 95.9 0.0099 2.1E-07 60.3 5.0 55 10-65 4-59 (520)
270 PRK07578 short chain dehydroge 95.8 0.013 2.7E-07 51.4 4.8 33 12-46 1-33 (199)
271 PRK06505 enoyl-(acyl carrier p 95.8 0.013 2.9E-07 54.2 5.1 37 9-46 5-43 (271)
272 PRK07533 enoyl-(acyl carrier p 95.8 0.019 4.1E-07 52.6 5.8 38 9-47 8-47 (258)
273 PRK12859 3-ketoacyl-(acyl-carr 95.7 0.018 3.8E-07 52.7 5.4 35 9-44 4-40 (256)
274 PRK08415 enoyl-(acyl carrier p 95.7 0.018 4E-07 53.4 5.4 37 9-46 3-41 (274)
275 TIGR01289 LPOR light-dependent 95.7 0.018 3.8E-07 54.6 5.3 71 11-82 3-91 (314)
276 PRK08690 enoyl-(acyl carrier p 95.6 0.019 4.2E-07 52.7 5.3 37 8-45 3-41 (261)
277 PF08659 KR: KR domain; Inter 95.6 0.025 5.4E-07 49.1 5.6 33 13-45 2-34 (181)
278 COG1028 FabG Dehydrogenases wi 95.6 0.022 4.8E-07 51.6 5.5 40 8-48 2-41 (251)
279 KOG1208 Dehydrogenases with di 95.5 0.031 6.7E-07 52.9 6.4 77 8-86 32-127 (314)
280 COG1748 LYS9 Saccharopine dehy 95.5 0.016 3.4E-07 56.2 4.2 54 11-65 1-55 (389)
281 cd01336 MDH_cytoplasmic_cytoso 95.4 0.027 5.9E-07 53.7 5.6 36 12-47 3-44 (325)
282 KOG4169 15-hydroxyprostaglandi 95.3 0.027 5.8E-07 50.1 4.8 57 9-65 3-63 (261)
283 PRK05599 hypothetical protein; 95.3 0.021 4.7E-07 51.9 4.5 52 12-65 1-57 (246)
284 PRK06603 enoyl-(acyl carrier p 95.3 0.03 6.6E-07 51.3 5.5 36 9-45 6-43 (260)
285 PRK05579 bifunctional phosphop 95.3 0.027 5.8E-07 55.2 5.2 38 8-46 185-238 (399)
286 cd01078 NAD_bind_H4MPT_DH NADP 95.3 0.032 7E-07 48.9 5.2 37 9-46 26-62 (194)
287 TIGR01915 npdG NADPH-dependent 95.0 0.036 7.8E-07 49.7 4.9 35 12-47 1-35 (219)
288 TIGR00715 precor6x_red precorr 94.9 0.046 1E-06 50.2 5.3 35 12-48 1-35 (256)
289 PRK07370 enoyl-(acyl carrier p 94.9 0.051 1.1E-06 49.8 5.6 37 9-46 4-42 (258)
290 KOG1209 1-Acyl dihydroxyaceton 94.8 0.052 1.1E-06 47.8 5.1 53 10-65 6-60 (289)
291 PRK06997 enoyl-(acyl carrier p 94.8 0.047 1E-06 50.1 5.3 36 9-45 4-41 (260)
292 PRK08159 enoyl-(acyl carrier p 94.8 0.046 9.9E-07 50.6 5.1 36 9-45 8-45 (272)
293 PRK06940 short chain dehydroge 94.8 0.044 9.6E-07 50.7 4.9 52 11-65 2-57 (275)
294 PRK08664 aspartate-semialdehyd 94.6 0.051 1.1E-06 52.4 5.0 37 10-46 2-38 (349)
295 PF00056 Ldh_1_N: lactate/mala 94.5 0.082 1.8E-06 43.9 5.4 36 12-47 1-37 (141)
296 PF01118 Semialdhyde_dh: Semia 94.5 0.086 1.9E-06 42.5 5.4 34 13-46 1-34 (121)
297 PRK14874 aspartate-semialdehyd 94.5 0.088 1.9E-06 50.4 6.3 37 11-47 1-39 (334)
298 TIGR01500 sepiapter_red sepiap 94.2 0.071 1.5E-06 48.6 4.8 52 13-65 2-63 (256)
299 KOG0725 Reductases with broad 94.2 0.082 1.8E-06 49.0 5.2 78 8-86 5-103 (270)
300 PRK05671 aspartate-semialdehyd 94.0 0.15 3.4E-06 48.7 6.8 26 10-35 3-28 (336)
301 PTZ00325 malate dehydrogenase; 93.7 0.14 3E-06 48.7 5.9 37 10-46 7-44 (321)
302 PRK14106 murD UDP-N-acetylmura 93.7 0.089 1.9E-06 52.4 4.8 55 9-65 3-60 (450)
303 PRK11199 tyrA bifunctional cho 93.5 0.12 2.6E-06 50.3 5.3 36 10-46 97-132 (374)
304 PLN02730 enoyl-[acyl-carrier-p 93.2 0.17 3.6E-06 47.8 5.5 35 9-45 7-43 (303)
305 KOG1207 Diacetyl reductase/L-x 93.0 0.12 2.6E-06 44.1 3.8 55 10-65 6-61 (245)
306 COG0569 TrkA K+ transport syst 93.0 0.12 2.5E-06 46.7 4.0 52 12-65 1-52 (225)
307 PRK06849 hypothetical protein; 92.9 0.17 3.7E-06 49.4 5.4 36 10-46 3-38 (389)
308 PRK06129 3-hydroxyacyl-CoA deh 92.8 0.15 3.2E-06 48.2 4.6 35 11-47 2-36 (308)
309 PLN00106 malate dehydrogenase 92.7 0.22 4.8E-06 47.4 5.7 38 10-47 17-55 (323)
310 KOG1610 Corticosteroid 11-beta 92.7 1.6 3.4E-05 41.0 10.9 120 9-157 27-166 (322)
311 PRK02472 murD UDP-N-acetylmura 92.7 0.18 4E-06 50.1 5.3 72 9-82 3-78 (447)
312 PLN02968 Probable N-acetyl-gam 92.5 0.19 4.2E-06 48.9 5.1 38 10-47 37-74 (381)
313 cd01075 NAD_bind_Leu_Phe_Val_D 92.4 0.25 5.5E-06 43.6 5.3 37 8-46 25-61 (200)
314 KOG1199 Short-chain alcohol de 92.4 2.7 5.8E-05 36.0 11.0 56 9-65 7-63 (260)
315 KOG1611 Predicted short chain- 92.2 0.49 1.1E-05 42.2 6.7 73 9-82 1-94 (249)
316 PRK00436 argC N-acetyl-gamma-g 92.2 0.24 5.2E-06 47.6 5.3 35 11-45 2-36 (343)
317 KOG1014 17 beta-hydroxysteroid 92.2 0.14 3.1E-06 47.7 3.5 53 12-65 50-107 (312)
318 PF03721 UDPG_MGDP_dh_N: UDP-g 92.1 0.22 4.9E-06 43.4 4.5 129 12-175 1-140 (185)
319 PRK09496 trkA potassium transp 92.0 0.16 3.4E-06 50.6 3.9 50 12-65 1-51 (453)
320 PF04127 DFP: DNA / pantothena 92.0 0.5 1.1E-05 41.2 6.5 50 10-65 2-67 (185)
321 PRK04148 hypothetical protein; 91.8 0.16 3.5E-06 41.7 3.1 50 11-65 17-66 (134)
322 PRK08655 prephenate dehydrogen 91.8 0.24 5.2E-06 49.3 4.9 35 12-47 1-35 (437)
323 PRK09496 trkA potassium transp 91.7 0.21 4.6E-06 49.7 4.4 54 10-65 230-283 (453)
324 PLN00015 protochlorophyllide r 91.6 0.2 4.3E-06 47.2 3.9 50 15-65 1-55 (308)
325 PF01488 Shikimate_DH: Shikima 91.3 0.52 1.1E-05 38.7 5.7 57 8-65 9-67 (135)
326 TIGR00521 coaBC_dfp phosphopan 91.3 0.32 7E-06 47.5 5.1 37 9-46 183-235 (390)
327 PRK06300 enoyl-(acyl carrier p 91.2 0.4 8.7E-06 45.1 5.5 36 9-45 6-43 (299)
328 cd05294 LDH-like_MDH_nadp A la 91.1 0.38 8.2E-06 45.5 5.2 35 12-46 1-36 (309)
329 PRK08040 putative semialdehyde 91.0 0.74 1.6E-05 44.1 7.1 38 9-46 2-41 (336)
330 PRK11064 wecC UDP-N-acetyl-D-m 90.9 0.32 7E-06 48.0 4.8 37 9-47 1-37 (415)
331 COG2085 Predicted dinucleotide 90.9 0.34 7.5E-06 42.8 4.3 36 11-48 1-36 (211)
332 PRK12548 shikimate 5-dehydroge 90.8 0.46 9.9E-06 44.5 5.4 37 9-46 124-160 (289)
333 cd01337 MDH_glyoxysomal_mitoch 90.7 0.41 8.9E-06 45.3 5.1 78 12-89 1-85 (310)
334 COG0039 Mdh Malate/lactate deh 90.6 3.7 8E-05 38.8 11.2 76 12-89 1-86 (313)
335 PRK08818 prephenate dehydrogen 90.3 0.52 1.1E-05 45.7 5.4 36 9-45 2-38 (370)
336 cd00704 MDH Malate dehydrogena 90.2 0.42 9E-06 45.6 4.6 34 13-46 2-41 (323)
337 cd01065 NAD_bind_Shikimate_DH 89.8 0.6 1.3E-05 38.9 4.9 38 9-47 17-54 (155)
338 PF03435 Saccharop_dh: Sacchar 89.7 0.28 6.1E-06 47.8 3.2 51 14-65 1-54 (386)
339 PLN02383 aspartate semialdehyd 89.7 1.2 2.6E-05 42.8 7.4 25 11-35 7-31 (344)
340 PRK05442 malate dehydrogenase; 89.7 0.69 1.5E-05 44.1 5.7 38 10-47 3-46 (326)
341 PF02737 3HCDH_N: 3-hydroxyacy 89.6 0.48 1E-05 41.1 4.2 33 13-47 1-33 (180)
342 PF03446 NAD_binding_2: NAD bi 89.5 0.61 1.3E-05 39.6 4.7 35 11-47 1-35 (163)
343 PRK06444 prephenate dehydrogen 89.3 0.49 1.1E-05 41.7 4.1 28 12-40 1-28 (197)
344 TIGR02114 coaB_strep phosphopa 89.3 0.49 1.1E-05 42.7 4.2 27 18-45 22-48 (227)
345 cd01485 E1-1_like Ubiquitin ac 89.1 0.39 8.5E-06 42.3 3.3 38 8-46 16-53 (198)
346 PRK05086 malate dehydrogenase; 89.0 0.55 1.2E-05 44.5 4.5 36 12-47 1-38 (312)
347 TIGR01296 asd_B aspartate-semi 88.9 0.64 1.4E-05 44.6 4.9 27 13-40 1-27 (339)
348 PRK14619 NAD(P)H-dependent gly 88.9 0.89 1.9E-05 42.9 5.8 36 11-48 4-39 (308)
349 PLN02256 arogenate dehydrogena 88.8 0.7 1.5E-05 43.6 5.0 38 7-46 32-69 (304)
350 TIGR00978 asd_EA aspartate-sem 88.6 0.66 1.4E-05 44.6 4.8 31 12-42 1-31 (341)
351 cd01080 NAD_bind_m-THF_DH_Cycl 88.5 0.93 2E-05 38.8 5.2 37 9-46 42-78 (168)
352 PF02254 TrkA_N: TrkA-N domain 88.4 0.43 9.4E-06 37.7 2.9 48 14-65 1-48 (116)
353 TIGR01758 MDH_euk_cyt malate d 88.4 0.76 1.6E-05 43.8 5.0 36 13-48 1-42 (324)
354 PLN02602 lactate dehydrogenase 88.4 1 2.2E-05 43.4 5.9 36 12-48 38-74 (350)
355 TIGR01850 argC N-acetyl-gamma- 88.3 0.72 1.6E-05 44.4 4.8 35 12-46 1-36 (346)
356 cd01338 MDH_choloroplast_like 88.3 0.94 2E-05 43.1 5.6 37 12-48 3-45 (322)
357 PRK07819 3-hydroxybutyryl-CoA 88.2 0.76 1.6E-05 43.0 4.8 37 10-48 4-40 (286)
358 PRK08293 3-hydroxybutyryl-CoA 88.2 0.76 1.6E-05 42.9 4.9 35 11-47 3-37 (287)
359 PRK06718 precorrin-2 dehydroge 87.9 1.1 2.4E-05 39.6 5.4 35 9-45 8-42 (202)
360 TIGR01772 MDH_euk_gproteo mala 87.8 0.8 1.7E-05 43.4 4.7 34 13-46 1-35 (312)
361 PRK00066 ldh L-lactate dehydro 87.8 1.1 2.4E-05 42.5 5.7 39 9-48 4-43 (315)
362 PRK06223 malate dehydrogenase; 87.8 1 2.2E-05 42.5 5.4 37 11-48 2-38 (307)
363 PRK05808 3-hydroxybutyryl-CoA 87.7 0.74 1.6E-05 42.8 4.4 36 10-47 2-37 (282)
364 cd01492 Aos1_SUMO Ubiquitin ac 87.7 0.55 1.2E-05 41.3 3.4 39 7-46 17-55 (197)
365 PRK00094 gpsA NAD(P)H-dependen 87.6 0.78 1.7E-05 43.4 4.6 34 11-46 1-34 (325)
366 COG1004 Ugd Predicted UDP-gluc 87.4 0.77 1.7E-05 44.4 4.3 35 12-48 1-35 (414)
367 PRK06728 aspartate-semialdehyd 87.2 2.2 4.7E-05 41.0 7.3 35 11-46 5-43 (347)
368 PRK00258 aroE shikimate 5-dehy 87.0 1.1 2.5E-05 41.6 5.3 38 9-47 121-158 (278)
369 cd05191 NAD_bind_amino_acid_DH 87.0 1.8 3.8E-05 32.4 5.4 35 9-44 21-55 (86)
370 PRK11863 N-acetyl-gamma-glutam 86.7 1.3 2.8E-05 42.0 5.3 33 11-43 2-34 (313)
371 PF00070 Pyr_redox: Pyridine n 86.7 1.9 4E-05 31.7 5.3 35 13-49 1-35 (80)
372 PRK07417 arogenate dehydrogena 86.6 0.87 1.9E-05 42.3 4.2 34 12-47 1-34 (279)
373 PTZ00082 L-lactate dehydrogena 86.5 1.5 3.2E-05 41.8 5.7 40 8-48 3-42 (321)
374 PRK14192 bifunctional 5,10-met 86.5 1.3 2.8E-05 41.4 5.2 37 8-45 156-192 (283)
375 PRK08229 2-dehydropantoate 2-r 86.4 0.96 2.1E-05 43.2 4.5 34 11-46 2-35 (341)
376 PRK12409 D-amino acid dehydrog 86.4 1.1 2.5E-05 43.8 5.1 33 12-46 2-34 (410)
377 PF01113 DapB_N: Dihydrodipico 86.2 1.6 3.4E-05 35.3 5.0 34 12-46 1-36 (124)
378 KOG1210 Predicted 3-ketosphing 86.1 6.8 0.00015 36.9 9.6 107 12-132 34-159 (331)
379 PRK06522 2-dehydropantoate 2-r 86.0 1.1 2.3E-05 41.9 4.6 33 12-46 1-33 (304)
380 PRK09260 3-hydroxybutyryl-CoA 85.9 1 2.2E-05 42.0 4.3 34 12-47 2-35 (288)
381 PRK04308 murD UDP-N-acetylmura 85.9 1.7 3.7E-05 43.2 6.2 55 9-65 3-59 (445)
382 PRK14194 bifunctional 5,10-met 85.8 1.7 3.7E-05 40.8 5.7 39 8-47 156-194 (301)
383 PRK07530 3-hydroxybutyryl-CoA 85.8 1.2 2.7E-05 41.5 4.9 37 9-47 2-38 (292)
384 PF10727 Rossmann-like: Rossma 85.8 0.83 1.8E-05 37.2 3.2 42 1-45 1-42 (127)
385 PRK13656 trans-2-enoyl-CoA red 85.7 1.3 2.8E-05 43.1 4.9 33 11-45 41-75 (398)
386 PRK06249 2-dehydropantoate 2-r 85.7 1.5 3.3E-05 41.4 5.4 36 9-46 3-38 (313)
387 PLN02545 3-hydroxybutyryl-CoA 85.7 1.3 2.7E-05 41.5 4.8 37 9-47 2-38 (295)
388 PRK12475 thiamine/molybdopteri 85.6 0.98 2.1E-05 43.3 4.1 38 8-46 21-58 (338)
389 PF02826 2-Hacid_dh_C: D-isome 85.5 2.2 4.8E-05 36.8 5.9 38 9-48 34-71 (178)
390 PRK14175 bifunctional 5,10-met 85.5 1.7 3.8E-05 40.5 5.5 37 9-46 156-192 (286)
391 TIGR02354 thiF_fam2 thiamine b 85.2 1 2.2E-05 39.7 3.7 38 8-46 18-55 (200)
392 TIGR01759 MalateDH-SF1 malate 85.0 1.7 3.7E-05 41.4 5.4 36 11-46 3-44 (323)
393 KOG4022 Dihydropteridine reduc 84.6 5.6 0.00012 33.8 7.5 71 10-87 2-87 (236)
394 PRK07688 thiamine/molybdopteri 84.5 1.2 2.5E-05 42.9 4.0 38 8-46 21-58 (339)
395 PRK13553 fumarate reductase cy 84.5 4.6 9.9E-05 36.9 7.5 74 255-332 107-189 (258)
396 PRK02006 murD UDP-N-acetylmura 84.4 18 0.0004 36.5 12.9 140 10-176 6-149 (498)
397 PTZ00117 malate dehydrogenase; 84.2 2 4.4E-05 40.8 5.5 38 10-48 4-41 (319)
398 KOG4288 Predicted oxidoreducta 83.9 1.4 3.1E-05 39.5 4.0 39 12-51 3-41 (283)
399 PRK07502 cyclohexadienyl dehyd 83.9 1.6 3.6E-05 41.0 4.8 37 10-47 5-42 (307)
400 PRK06035 3-hydroxyacyl-CoA deh 83.7 1.7 3.7E-05 40.6 4.7 35 11-47 3-37 (291)
401 cd08259 Zn_ADH5 Alcohol dehydr 83.6 1.8 4E-05 40.5 5.0 36 10-46 162-197 (332)
402 PRK01438 murD UDP-N-acetylmura 83.6 3.3 7.1E-05 41.6 7.1 55 9-65 14-71 (480)
403 TIGR01470 cysG_Nterm siroheme 83.5 2.5 5.4E-05 37.5 5.4 54 9-65 7-61 (205)
404 PF13241 NAD_binding_7: Putati 83.4 1.5 3.2E-05 34.2 3.5 36 9-46 5-40 (103)
405 TIGR03026 NDP-sugDHase nucleot 83.3 1.6 3.4E-05 43.0 4.5 34 12-47 1-34 (411)
406 PRK14618 NAD(P)H-dependent gly 82.9 1.9 4.2E-05 41.0 4.8 35 11-47 4-38 (328)
407 PRK10669 putative cation:proto 82.8 1.2 2.5E-05 45.9 3.5 50 12-65 418-467 (558)
408 cd08295 double_bond_reductase_ 82.4 2.1 4.6E-05 40.6 4.9 36 10-46 151-186 (338)
409 PRK06598 aspartate-semialdehyd 82.3 2.7 5.9E-05 40.7 5.6 35 11-45 1-38 (369)
410 TIGR02853 spore_dpaA dipicolin 82.1 2.4 5.1E-05 39.7 5.0 37 9-47 149-185 (287)
411 cd05292 LDH_2 A subgroup of L- 82.1 2.4 5.2E-05 40.1 5.1 35 12-47 1-36 (308)
412 cd05293 LDH_1 A subgroup of L- 82.0 2.8 6.1E-05 39.7 5.5 36 11-47 3-39 (312)
413 cd05212 NAD_bind_m-THF_DH_Cycl 81.7 3.9 8.4E-05 33.9 5.6 38 8-46 25-62 (140)
414 PRK14188 bifunctional 5,10-met 81.6 2.9 6.4E-05 39.2 5.4 34 9-43 156-189 (296)
415 KOG1478 3-keto sterol reductas 81.5 2.2 4.8E-05 38.9 4.2 78 10-87 2-104 (341)
416 COG0002 ArgC Acetylglutamate s 81.3 2.2 4.9E-05 40.6 4.5 36 11-46 2-37 (349)
417 PF00899 ThiF: ThiF family; I 81.2 3 6.5E-05 34.0 4.8 35 11-46 2-36 (135)
418 COG0287 TyrA Prephenate dehydr 81.2 2.9 6.2E-05 39.0 5.1 37 11-49 3-39 (279)
419 PF02882 THF_DHG_CYH_C: Tetrah 81.0 3.7 8.1E-05 34.8 5.4 37 9-46 34-70 (160)
420 TIGR00507 aroE shikimate 5-deh 80.7 2.9 6.2E-05 38.6 5.0 36 10-47 116-151 (270)
421 PRK06019 phosphoribosylaminoim 80.6 3.2 6.9E-05 40.3 5.5 36 11-48 2-37 (372)
422 cd01483 E1_enzyme_family Super 80.4 3.1 6.6E-05 34.3 4.6 34 13-47 1-34 (143)
423 PRK00048 dihydrodipicolinate r 80.4 3.6 7.8E-05 37.8 5.5 35 11-46 1-37 (257)
424 PF01210 NAD_Gly3P_dh_N: NAD-d 80.3 2.9 6.2E-05 35.2 4.5 32 13-46 1-32 (157)
425 COG0665 DadA Glycine/D-amino a 80.3 3.2 7E-05 40.0 5.5 37 10-48 3-39 (387)
426 PLN02520 bifunctional 3-dehydr 80.3 3 6.5E-05 42.6 5.4 36 9-46 377-412 (529)
427 PF00670 AdoHcyase_NAD: S-aden 80.2 2.9 6.4E-05 35.5 4.4 91 7-109 19-110 (162)
428 PRK12549 shikimate 5-dehydroge 80.2 3 6.4E-05 39.0 4.9 38 9-47 125-162 (284)
429 PRK06130 3-hydroxybutyryl-CoA 79.9 3 6.6E-05 39.2 5.0 35 11-47 4-38 (311)
430 PRK06719 precorrin-2 dehydroge 79.8 3.6 7.8E-05 34.8 4.9 34 8-43 10-43 (157)
431 TIGR02825 B4_12hDH leukotriene 79.7 3.3 7.1E-05 39.0 5.2 36 10-46 138-173 (325)
432 PRK07679 pyrroline-5-carboxyla 79.3 3.3 7.2E-05 38.4 5.0 36 10-46 2-40 (279)
433 cd05213 NAD_bind_Glutamyl_tRNA 79.3 3 6.6E-05 39.4 4.8 38 9-47 176-213 (311)
434 PRK11559 garR tartronate semia 79.2 2.8 6.1E-05 39.1 4.5 34 12-47 3-36 (296)
435 PRK15461 NADH-dependent gamma- 79.1 2.8 6.1E-05 39.3 4.5 34 12-47 2-35 (296)
436 PRK06901 aspartate-semialdehyd 78.8 3.8 8.2E-05 38.8 5.1 35 10-45 2-38 (322)
437 TIGR02813 omega_3_PfaA polyket 78.7 2.8 6.1E-05 50.5 5.2 36 10-46 1996-2032(2582)
438 PRK12480 D-lactate dehydrogena 78.6 3.8 8.3E-05 39.1 5.2 37 9-47 144-180 (330)
439 PRK00421 murC UDP-N-acetylmura 78.6 3.7 8.1E-05 41.0 5.5 53 9-64 5-58 (461)
440 cd08294 leukotriene_B4_DH_like 78.6 3.5 7.5E-05 38.7 5.0 36 10-46 143-178 (329)
441 PLN02712 arogenate dehydrogena 78.2 4.1 8.8E-05 42.9 5.7 36 9-46 50-85 (667)
442 cd05211 NAD_bind_Glu_Leu_Phe_V 78.1 4.9 0.00011 36.0 5.5 37 8-45 20-56 (217)
443 PRK13982 bifunctional SbtC-lik 78.0 6.3 0.00014 39.5 6.7 51 9-65 254-320 (475)
444 cd05291 HicDH_like L-2-hydroxy 77.8 4.1 8.9E-05 38.4 5.2 36 12-48 1-37 (306)
445 PRK05690 molybdopterin biosynt 77.7 3.4 7.4E-05 37.7 4.4 37 9-46 30-66 (245)
446 PLN02353 probable UDP-glucose 77.6 3.4 7.3E-05 41.6 4.7 36 11-47 1-37 (473)
447 COG0163 UbiX 3-polyprenyl-4-hy 77.6 7.6 0.00017 33.5 6.1 147 13-176 6-179 (191)
448 PRK11880 pyrroline-5-carboxyla 77.6 3.3 7.1E-05 38.0 4.4 35 11-46 2-38 (267)
449 PRK13243 glyoxylate reductase; 77.5 4.3 9.3E-05 38.9 5.2 37 9-47 148-184 (333)
450 PLN02712 arogenate dehydrogena 77.5 3.8 8.2E-05 43.1 5.2 36 9-46 367-402 (667)
451 PRK07066 3-hydroxybutyryl-CoA 77.4 4 8.7E-05 38.8 4.9 35 11-47 7-41 (321)
452 PRK12767 carbamoyl phosphate s 77.3 3.4 7.3E-05 39.0 4.5 35 11-47 1-36 (326)
453 PRK08306 dipicolinate synthase 77.1 4.3 9.4E-05 38.1 5.0 37 9-47 150-186 (296)
454 cd00650 LDH_MDH_like NAD-depen 76.9 3.5 7.6E-05 37.9 4.3 35 14-48 1-38 (263)
455 TIGR01035 hemA glutamyl-tRNA r 76.8 4.3 9.2E-05 40.2 5.2 38 9-47 178-215 (417)
456 PRK00711 D-amino acid dehydrog 76.7 4.1 9E-05 39.8 5.1 33 12-46 1-33 (416)
457 PLN03154 putative allyl alcoho 76.6 3.8 8.2E-05 39.2 4.7 36 10-46 158-193 (348)
458 TIGR02356 adenyl_thiF thiazole 76.6 3.2 6.9E-05 36.6 3.8 39 7-46 17-55 (202)
459 PLN00112 malate dehydrogenase 76.5 4.1 8.9E-05 40.5 4.9 78 11-89 100-193 (444)
460 PF03807 F420_oxidored: NADP o 76.4 4.6 0.0001 30.5 4.3 34 13-47 1-37 (96)
461 PRK14179 bifunctional 5,10-met 76.4 4.3 9.2E-05 37.9 4.7 33 9-42 156-188 (284)
462 cd01079 NAD_bind_m-THF_DH NAD 76.3 5.7 0.00012 34.8 5.1 37 8-45 59-95 (197)
463 cd08293 PTGR2 Prostaglandin re 76.1 4.3 9.3E-05 38.4 4.9 35 12-46 156-190 (345)
464 PRK14189 bifunctional 5,10-met 76.1 5.7 0.00012 37.1 5.5 36 9-45 156-191 (285)
465 PRK05476 S-adenosyl-L-homocyst 76.1 4.7 0.0001 39.9 5.1 38 9-48 210-247 (425)
466 cd05188 MDR Medium chain reduc 76.1 4 8.8E-05 36.6 4.5 35 10-46 134-168 (271)
467 PRK11259 solA N-methyltryptoph 76.0 4.5 9.7E-05 38.9 5.0 34 12-47 4-37 (376)
468 PRK14191 bifunctional 5,10-met 75.8 5.9 0.00013 36.9 5.5 36 9-45 155-190 (285)
469 PRK09288 purT phosphoribosylgl 75.8 7 0.00015 38.0 6.4 37 10-48 11-47 (395)
470 TIGR01763 MalateDH_bact malate 75.8 5.1 0.00011 37.8 5.2 35 12-47 2-36 (305)
471 PRK12921 2-dehydropantoate 2-r 75.5 4.1 9E-05 38.0 4.5 31 12-44 1-31 (305)
472 PRK07236 hypothetical protein; 75.1 5.4 0.00012 38.7 5.4 37 9-47 4-40 (386)
473 cd05290 LDH_3 A subgroup of L- 75.1 4.6 0.0001 38.2 4.7 36 13-49 1-37 (307)
474 PRK10537 voltage-gated potassi 75.0 6.2 0.00014 38.7 5.7 49 11-65 240-288 (393)
475 TIGR00872 gnd_rel 6-phosphoglu 74.9 4.2 9E-05 38.2 4.4 34 12-47 1-34 (298)
476 COG0604 Qor NADPH:quinone redu 74.8 4.5 9.8E-05 38.5 4.6 35 11-46 143-177 (326)
477 COG0289 DapB Dihydrodipicolina 74.8 6.3 0.00014 36.1 5.2 37 11-47 2-39 (266)
478 cd08253 zeta_crystallin Zeta-c 74.4 5.3 0.00012 36.9 5.0 36 10-46 144-179 (325)
479 PRK15057 UDP-glucose 6-dehydro 74.4 3.9 8.5E-05 40.0 4.1 34 12-48 1-34 (388)
480 PRK00141 murD UDP-N-acetylmura 74.4 4.8 0.0001 40.5 4.9 58 4-64 8-65 (473)
481 TIGR02355 moeB molybdopterin s 74.3 4 8.6E-05 37.1 3.9 39 8-47 21-59 (240)
482 TIGR01851 argC_other N-acetyl- 74.3 5 0.00011 37.9 4.6 32 12-43 2-33 (310)
483 PRK03659 glutathione-regulated 74.2 2.9 6.3E-05 43.4 3.4 51 11-65 400-450 (601)
484 PRK07531 bifunctional 3-hydrox 74.1 5 0.00011 40.6 4.9 35 12-48 5-39 (495)
485 PRK07634 pyrroline-5-carboxyla 74.1 6.4 0.00014 35.5 5.2 36 9-45 2-40 (245)
486 cd01076 NAD_bind_1_Glu_DH NAD( 73.5 7.1 0.00015 35.2 5.3 33 8-42 28-60 (227)
487 smart00859 Semialdhyde_dh Semi 73.2 6.3 0.00014 31.4 4.5 29 13-42 1-30 (122)
488 cd05311 NAD_bind_2_malic_enz N 73.1 6.8 0.00015 35.2 5.1 37 9-46 23-61 (226)
489 cd00757 ThiF_MoeB_HesA_family 73.0 4.3 9.4E-05 36.5 3.8 38 8-46 18-55 (228)
490 cd08289 MDR_yhfp_like Yhfp put 72.9 6.1 0.00013 36.9 5.0 36 11-47 147-182 (326)
491 PRK01710 murD UDP-N-acetylmura 72.9 7.3 0.00016 38.9 5.8 55 9-65 12-69 (458)
492 cd05276 p53_inducible_oxidored 72.7 6.5 0.00014 36.2 5.1 36 10-46 139-174 (323)
493 PRK15116 sulfur acceptor prote 72.5 5.8 0.00013 36.7 4.6 37 9-46 28-64 (268)
494 PRK05335 tRNA (uracil-5-)-meth 72.4 6.5 0.00014 38.9 5.1 36 11-48 2-37 (436)
495 PF12076 Wax2_C: WAX2 C-termin 72.3 4.5 9.8E-05 34.0 3.4 30 14-44 1-30 (164)
496 PRK14620 NAD(P)H-dependent gly 71.9 6.4 0.00014 37.3 4.9 33 12-46 1-33 (326)
497 PRK10792 bifunctional 5,10-met 71.8 8.5 0.00018 35.9 5.5 37 9-46 157-193 (285)
498 PRK15469 ghrA bifunctional gly 71.7 8.7 0.00019 36.4 5.7 36 9-46 134-169 (312)
499 PRK09599 6-phosphogluconate de 71.5 5.7 0.00012 37.3 4.4 34 12-47 1-34 (301)
500 PRK00045 hemA glutamyl-tRNA re 71.3 7.2 0.00016 38.6 5.3 38 9-47 180-217 (423)
No 1
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-36 Score=282.08 Aligned_cols=243 Identities=37% Similarity=0.593 Sum_probs=218.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCc-cccccc---CCCeEEEEcc------------------
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSP-WSHLLI---NHGVHCIQGL------------------ 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~-~~~~~~---~~~v~~i~gD------------------ 65 (366)
+++.+++||||+||+|++|++.|++++ ..+|+++|..+... ...... ...++++++|
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~~Vvh 81 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGAVVVH 81 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCceEEE
Confidence 567899999999999999999999998 45899999998632 222222 5677888887
Q ss_pred --------------------------------------------------------------------------------
Q 017760 66 -------------------------------------------------------------------------------- 65 (366)
Q Consensus 66 -------------------------------------------------------------------------------- 65 (366)
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence
Q ss_pred ----ccCCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760 66 ----RKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 141 (366)
Q Consensus 66 ----ks~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 141 (366)
++++..++.||+|||+.|||||++.+++.++..+++|..++..|+++.+.|++|++|++.||++|.++|.+.
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~---- 237 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDK---- 237 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhc----
Confidence 224467899999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCC-ccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhh
Q 017760 142 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV 220 (366)
Q Consensus 142 ~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~-~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev 220 (366)
.+..+||.|||+|++|+..++++..+.+.+|+..+ .+.+|.++.+.++.+.|+++.+++| .+|.+++.++
T Consensus 238 --~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p-------~~p~lt~~~v 308 (361)
T KOG1430|consen 238 --SPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRP-------YQPILTRFRV 308 (361)
T ss_pred --CCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccC-------CCCCcChhhe
Confidence 78899999999999999999999999999999998 7889999999999999999999976 4799999999
Q ss_pred hhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760 221 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 264 (366)
Q Consensus 221 ~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~ 264 (366)
+....+++||++||+++|||+|.++++|++++++.|+.......
T Consensus 309 ~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~~~ 352 (361)
T KOG1430|consen 309 ALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESDSA 352 (361)
T ss_pred eeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhhcc
Confidence 99999999999999999999999999999999999886655443
No 2
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=6.1e-28 Score=216.69 Aligned_cols=208 Identities=22% Similarity=0.273 Sum_probs=166.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCccccc---c-cCCCeEEEEcc---------------------
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHL---L-INHGVHCIQGL--------------------- 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~---~-~~~~v~~i~gD--------------------- 65 (366)
|++|||||+||||++.+++++++.. .+|+.+|.-.-..+... + ..+...|+++|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 5799999999999999999999863 35888887653333222 2 23688999999
Q ss_pred ---------------------------------------------------------------------------cc---
Q 017760 66 ---------------------------------------------------------------------------RK--- 67 (366)
Q Consensus 66 ---------------------------------------------------------------------------ks--- 67 (366)
|+
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 11
Q ss_pred ------CCCCCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCC
Q 017760 68 ------NNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 139 (366)
Q Consensus 68 ------~~~~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 139 (366)
...++++++|.|+++-|||... .++|.++..+..|++++++|+|.+.+||+||+|=|+|+...+++
T Consensus 161 ~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~k------ 234 (340)
T COG1088 161 LLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTK------ 234 (340)
T ss_pred HHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhc------
Confidence 4567999999999999999863 57999999999999999999999999999999999999999963
Q ss_pred CCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHh
Q 017760 140 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE 219 (366)
Q Consensus 140 ~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~e 219 (366)
...|++|||+++...++-|+++.|++.+|...+..+ .+...+ . +.|. ++
T Consensus 235 ------g~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~--------------~li~~V----~----DRpG---HD 283 (340)
T COG1088 235 ------GKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYR--------------DLITFV----E----DRPG---HD 283 (340)
T ss_pred ------CcCCceEEeCCCccchHHHHHHHHHHHhCccccchh--------------hheEec----c----CCCC---Cc
Confidence 455999999999999999999999999998766300 000000 0 2221 11
Q ss_pred hhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 220 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 220 v~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
. ....|.+|++++|||.|+++++++|++|++||.++.
T Consensus 284 ~-----RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~ 320 (340)
T COG1088 284 R-----RYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNE 320 (340)
T ss_pred c-----ceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhch
Confidence 1 124689999999999999999999999999999876
No 3
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.95 E-value=2.7e-27 Score=227.60 Aligned_cols=214 Identities=20% Similarity=0.180 Sum_probs=158.2
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cc-------ccCCCeEEEEcc-------------
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HL-------LINHGVHCIQGL------------- 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~-------~~~~~v~~i~gD------------- 65 (366)
.+++++|+|||||||+|++|+++|+++| ++|+++|+....... .. .....++++.+|
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~ 90 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLN-QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN 90 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence 3567899999999999999999999999 499999986532110 00 001346777777
Q ss_pred --------------------------------------------------------------------------------
Q 017760 66 -------------------------------------------------------------------------------- 65 (366)
Q Consensus 66 -------------------------------------------------------------------------------- 65 (366)
T Consensus 91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (348)
T PRK15181 91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKY 170 (348)
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHH
Confidence
Q ss_pred -------ccCCCCCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760 66 -------RKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132 (366)
Q Consensus 66 -------ks~~~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 132 (366)
......+++.+++||+++|||++. .+++.++..+..|+.+.+.|++++.++|+||+|+|++++.+++
T Consensus 171 ~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~ 250 (348)
T PRK15181 171 VNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSAT 250 (348)
T ss_pred HHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHh
Confidence 002234799999999999999863 3578888888888888888999999999999999999998775
Q ss_pred ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760 133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ 212 (366)
Q Consensus 133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~ 212 (366)
+ ......+++|||++++++|+.|+++.+.+.++......... .....
T Consensus 251 ~---------~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~------------------------~~~~~ 297 (348)
T PRK15181 251 T---------NDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRA------------------------EPIYK 297 (348)
T ss_pred c---------ccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCC------------------------CcccC
Confidence 2 01123578999999999999999999999987431100000 00000
Q ss_pred CCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhc
Q 017760 213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 260 (366)
Q Consensus 213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~ 260 (366)
+ ..+.+. ....+|++|+++++||.|+++++|+++++++|++.+
T Consensus 298 ~-~~~~~~----~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~ 340 (348)
T PRK15181 298 D-FRDGDV----KHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK 340 (348)
T ss_pred C-CCCCcc----cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 1 111111 123579999999999999999999999999999765
No 4
>PF14934 DUF4499: Domain of unknown function (DUF4499)
Probab=99.94 E-value=3.7e-27 Score=178.67 Aligned_cols=85 Identities=34% Similarity=0.498 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHhhcCC--CCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CcCchhHHHHHH
Q 017760 275 FCLIGLPALFATAYLPD--IGPV-PILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV--DPANAKGWFWQT 349 (366)
Q Consensus 275 ~~~i~l~~~~~~~~lp~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~e~~~~~~~~~~~--~~~~~~~w~~~~ 349 (366)
.+.+.+++++++.++|+ +||+ +|++++. ++++.++|++|++||++|++||+||++||++. |++|+.+||+||
T Consensus 2 ~~~~~~~~vf~p~~~P~~~lgplg~f~~~~~---~~~~~~~~~~~~~a~~iHv~Ea~yA~~Lc~~~gi~~~~~~~W~~qT 78 (91)
T PF14934_consen 2 GLGYFMWVVFWPASIPYQSLGPLGSFVQYLV---FRSPFLLRLGFWFAWLIHVGEALYAFYLCRKKGISFSNRLLWFLQT 78 (91)
T ss_pred chHHHHHHHHhcccCCHHHcCcHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhHHHHHHHHH
Confidence 35678899999999999 9999 7755554 44555599999999999999999999999996 999999999999
Q ss_pred HHHhHhhHHHHHh
Q 017760 350 LALGVFSLRLLLK 362 (366)
Q Consensus 350 ~~~g~~s~~~~~~ 362 (366)
|+|||+||++|+|
T Consensus 79 fl~G~~SL~~LlK 91 (91)
T PF14934_consen 79 FLFGFPSLSLLLK 91 (91)
T ss_pred HHhHHHHHHHHhC
Confidence 9999999999987
No 5
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=2e-25 Score=198.86 Aligned_cols=207 Identities=21% Similarity=0.274 Sum_probs=164.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccccCCCeEEEEcc--------------------
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLLINHGVHCIQGL-------------------- 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~~~~~v~~i~gD-------------------- 65 (366)
...++|+||||+||||++||+.|...| |+|+++|........ .....+.++.+..|
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~eg-h~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapas 103 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEG-HEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPAS 103 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcC-CeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCC
Confidence 345899999999999999999999999 899999987654332 22234566666666
Q ss_pred -------------------------------------------------------------------------------c
Q 017760 66 -------------------------------------------------------------------------------R 66 (366)
Q Consensus 66 -------------------------------------------------------------------------------k 66 (366)
.
T Consensus 104 p~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~ 183 (350)
T KOG1429|consen 104 PPHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYA 183 (350)
T ss_pred CcccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHH
Confidence 2
Q ss_pred cCCCCCceEEEEeCCccccCCC----CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760 67 KNNRKCLYTCAVRPAAIYGPGE----ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 142 (366)
Q Consensus 67 s~~~~~l~~~ilRp~~iyGp~~----~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 142 (366)
..++.++.+.|.|+.++|||+. .+.+..++.++.++.++.++|+|.+.++|.||+|++++++++++.
T Consensus 184 y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s--------- 254 (350)
T KOG1429|consen 184 YHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMES--------- 254 (350)
T ss_pred hhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcC---------
Confidence 2677899999999999999974 577888999999999999999999999999999999999999972
Q ss_pred CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760 143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK 222 (366)
Q Consensus 143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~ 222 (366)
+ -.+.+||++++.+|+.|+++.+.+..+-...+...+ ..+ ++..
T Consensus 255 --~--~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~---------------------------~~~----Ddp~- 298 (350)
T KOG1429|consen 255 --D--YRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVE---------------------------NGP----DDPR- 298 (350)
T ss_pred --C--CcCCcccCCccceeHHHHHHHHHHHcCCCcceeecC---------------------------CCC----CCcc-
Confidence 2 223599999999999999999999996443322111 111 1111
Q ss_pred hcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760 223 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 264 (366)
Q Consensus 223 ~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~ 264 (366)
...-|++++++.|||+|+++++|+|+.|+.|++++-.+.
T Consensus 299 ---kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~i~~~ 337 (350)
T KOG1429|consen 299 ---KRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRERIARE 337 (350)
T ss_pred ---ccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHHHHHH
Confidence 124699999999999999999999999999998865544
No 6
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.94 E-value=1.9e-25 Score=220.38 Aligned_cols=145 Identities=19% Similarity=0.200 Sum_probs=115.5
Q ss_pred CCceEEEEeCCccccCCC----CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGE----ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI 146 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~----~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~ 146 (366)
.+++++++||+++|||+. .+.++.++..+..++.+.++|++++.++|+||+|+|++++.++++ .
T Consensus 280 ~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~-----------~- 347 (442)
T PLN02206 280 ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEG-----------E- 347 (442)
T ss_pred hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhc-----------C-
Confidence 468899999999999984 355778888888888878889999999999999999999999862 2
Q ss_pred CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760 147 ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT 226 (366)
Q Consensus 147 ~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~ 226 (366)
.++.|||++++++|+.|+++.+++.+|.+......| ... .+ ...
T Consensus 348 -~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p----------------------------~~~---~~----~~~ 391 (442)
T PLN02206 348 -HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRP----------------------------NTE---DD----PHK 391 (442)
T ss_pred -CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCC----------------------------CCC---CC----ccc
Confidence 245899999999999999999999998654322111 110 01 012
Q ss_pred ceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760 227 HYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 263 (366)
Q Consensus 227 ~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~ 263 (366)
...|++|+++++||+|+++++|+|+++++||++.-..
T Consensus 392 ~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~~~~ 428 (442)
T PLN02206 392 RKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVFG 428 (442)
T ss_pred cccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhhhc
Confidence 2579999999999999999999999999999775433
No 7
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.94 E-value=2.5e-25 Score=219.21 Aligned_cols=146 Identities=20% Similarity=0.244 Sum_probs=117.3
Q ss_pred CCceEEEEeCCccccCCC----CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGE----ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI 146 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~----~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~ 146 (366)
.+++++++||+++|||++ .+.++.++..+.++..+.++|++++.++|+||+|+|+++..+++. .
T Consensus 281 ~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~-----------~- 348 (436)
T PLN02166 281 AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEG-----------E- 348 (436)
T ss_pred hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhc-----------C-
Confidence 368899999999999985 356778888888888888889999999999999999999998862 1
Q ss_pred CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760 147 ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT 226 (366)
Q Consensus 147 ~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~ 226 (366)
.+++|||++++++|+.|+++.+.+.+|.+.+.... +.+ ..+. ..
T Consensus 349 -~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~----------------------------p~~---~~~~----~~ 392 (436)
T PLN02166 349 -HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFK----------------------------PNT---ADDP----HK 392 (436)
T ss_pred -CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeC----------------------------CCC---CCCc----cc
Confidence 24599999999999999999999999876432211 110 1111 12
Q ss_pred ceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760 227 HYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 264 (366)
Q Consensus 227 ~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~ 264 (366)
...|++|++++|||+|+++++++|+++++||+++-.+.
T Consensus 393 ~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~~~~~ 430 (436)
T PLN02166 393 RKPDISKAKELLNWEPKISLREGLPLMVSDFRNRILNE 430 (436)
T ss_pred cccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhcCc
Confidence 25799999999999999999999999999998765554
No 8
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.93 E-value=2.1e-24 Score=205.08 Aligned_cols=222 Identities=23% Similarity=0.242 Sum_probs=168.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------- 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------- 65 (366)
|+|+||||+||+|+++++.|+++| ++|++++|++.... .....+++.+++|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~ 77 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQG-EEVRVLVRPTSDRR--NLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRL 77 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCC-CEEEEEEecCcccc--ccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceeccc
Confidence 479999999999999999999999 59999999754321 1122245555555
Q ss_pred ----------------------------------------c--c----------------------------------CC
Q 017760 66 ----------------------------------------R--K----------------------------------NN 69 (366)
Q Consensus 66 ----------------------------------------k--s----------------------------------~~ 69 (366)
. . ..
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~ 157 (328)
T TIGR03466 78 WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAA 157 (328)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHH
Confidence 0 0 01
Q ss_pred CCCceEEEEeCCccccCCCCCC--HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 017760 70 RKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA 147 (366)
Q Consensus 70 ~~~l~~~ilRp~~iyGp~~~~~--l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~ 147 (366)
..+++++++||+.+|||++... ...++.....+......+ ...+|+|++|+|++++.+++ . ..
T Consensus 158 ~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~v~D~a~a~~~~~~-----------~-~~ 222 (328)
T TIGR03466 158 EKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVD---TGLNLVHVDDVAEGHLLALE-----------R-GR 222 (328)
T ss_pred hcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeC---CCcceEEHHHHHHHHHHHHh-----------C-CC
Confidence 1367899999999999987532 334444444444333222 34689999999999999996 2 23
Q ss_pred CCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccc
Q 017760 148 SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTH 227 (366)
Q Consensus 148 ~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~ 227 (366)
.++.|+++ ++++|+.|+++.+.+.+|.+.+...+|.+....++.+.+.+..+.+ ..|.++...+.....+.
T Consensus 223 ~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 293 (328)
T TIGR03466 223 IGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTG--------KEPRVTVDGVRMAKKKM 293 (328)
T ss_pred CCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcC--------CCCCCCHHHHHHHhccC
Confidence 56778875 6889999999999999999888888999999999998888877654 44555666666666667
Q ss_pred eecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 228 YFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 228 ~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
.+|++|++++|||+|. +++++|+++++||++++
T Consensus 294 ~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~ 326 (328)
T TIGR03466 294 FFSSAKAVRELGYRQR-PAREALRDAVEWFRANG 326 (328)
T ss_pred CCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhC
Confidence 8999999999999996 99999999999998764
No 9
>PLN00016 RNA-binding protein; Provisional
Probab=99.93 E-value=4.7e-25 Score=214.41 Aligned_cols=221 Identities=21% Similarity=0.227 Sum_probs=163.3
Q ss_pred cCCeEEEE----cCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---------ccccCCCeEEEEcc-----------
Q 017760 10 EGKTFLVT----GGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---------HLLINHGVHCIQGL----------- 65 (366)
Q Consensus 10 ~~~~VlIT----GgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---------~~~~~~~v~~i~gD----------- 65 (366)
++++|+|| |||||+|++|++.|++.| |+|++++|+...... ..+...+++++++|
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~~~ 129 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAG-HEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKVAGA 129 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCC-CEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhhccC
Confidence 35789999 999999999999999999 699999998643110 01112346666666
Q ss_pred -----------------------------------------c----------------c-------CCCCCceEEEEeCC
Q 017760 66 -----------------------------------------R----------------K-------NNRKCLYTCAVRPA 81 (366)
Q Consensus 66 -----------------------------------------k----------------s-------~~~~~l~~~ilRp~ 81 (366)
. + ....+++++++||+
T Consensus 130 ~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~~~~l~~~ilRp~ 209 (378)
T PLN00016 130 GFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTSFRPQ 209 (378)
T ss_pred CccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHHHcCCCeEEEece
Confidence 0 0 11236789999999
Q ss_pred ccccCCCCC-CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCC
Q 017760 82 AIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPI 160 (366)
Q Consensus 82 ~iyGp~~~~-~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~v 160 (366)
++|||+... ....++..+..+..+.++|++++.++|+|++|+|+++..+++ .+...+++||+++++++
T Consensus 210 ~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~-----------~~~~~~~~yni~~~~~~ 278 (378)
T PLN00016 210 YIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVG-----------NPKAAGQIFNIVSDRAV 278 (378)
T ss_pred eEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhc-----------CccccCCEEEecCCCcc
Confidence 999998653 345677778888877777888999999999999999999996 44455789999999999
Q ss_pred CHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCC
Q 017760 161 NTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY 240 (366)
Q Consensus 161 s~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~ 240 (366)
|+.|+++.+.+.+|.+.+....+.... +. . .... .+. .....+.|++|++++|||
T Consensus 279 s~~el~~~i~~~~g~~~~i~~~~~~~~-------~~----~---------~~~~-~p~----~~~~~~~d~~ka~~~LGw 333 (378)
T PLN00016 279 TFDGMAKACAKAAGFPEEIVHYDPKAV-------GF----G---------AKKA-FPF----RDQHFFASPRKAKEELGW 333 (378)
T ss_pred CHHHHHHHHHHHhCCCCceeecCcccc-------Cc----c---------cccc-ccc----cccccccCHHHHHHhcCC
Confidence 999999999999998754332221100 00 0 0000 000 011224699999999999
Q ss_pred CCCCChHHHHHHHHHHHHhccccCCCC
Q 017760 241 VPIVSPREGMAATISYWQDRKRKSLDG 267 (366)
Q Consensus 241 ~p~~~~~e~l~~~v~~~~~~~~~~~~~ 267 (366)
+|+++++|+|+++++||+++++.+++.
T Consensus 334 ~p~~~l~egl~~~~~~~~~~~~~~~~~ 360 (378)
T PLN00016 334 TPKFDLVEDLKDRYELYFGRGRDRKEA 360 (378)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcccc
Confidence 999999999999999999888776543
No 10
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.93 E-value=7.1e-25 Score=197.89 Aligned_cols=202 Identities=22% Similarity=0.228 Sum_probs=157.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------- 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------- 65 (366)
|+||||||+||||++.+.+|++.| ++|+++|.-..... ..+....+++++||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G-~~vvV~DNL~~g~~-~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~ 78 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTG-HEVVVLDNLSNGHK-IALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI 78 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCC-CeEEEEecCCCCCH-HHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence 589999999999999999999999 59999998765432 22322237899999
Q ss_pred ----------------------------------------------------------------------------ccCC
Q 017760 66 ----------------------------------------------------------------------------RKNN 69 (366)
Q Consensus 66 ----------------------------------------------------------------------------ks~~ 69 (366)
....
T Consensus 79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~ 158 (329)
T COG1087 79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAK 158 (329)
T ss_pred ccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 1145
Q ss_pred CCCceEEEEeCCccccCCC-----------CCCHHHHHHHHHcCC-CCeeec------CCCcceeceeHHHHHHHHHHHH
Q 017760 70 RKCLYTCAVRPAAIYGPGE-----------ERHLPRIVSLAKLGL-VPFKIG------EPSVKTDWIYVDNLVLALILAS 131 (366)
Q Consensus 70 ~~~l~~~ilRp~~iyGp~~-----------~~~l~~~i~~~~~g~-~~~~~g------~~~~~~~~v~vdDla~a~~~a~ 131 (366)
..++++++||..++-|... .+.+|.+++.+...+ .+.++| ||+..+|||||.|+|+||++|+
T Consensus 159 a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al 238 (329)
T COG1087 159 ANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLAL 238 (329)
T ss_pred hCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHH
Confidence 5679999999999999753 245677777655433 356676 6789999999999999999999
Q ss_pred hccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCC
Q 017760 132 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP 211 (366)
Q Consensus 132 ~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~ 211 (366)
+.|.+. ...++||++.|.-.|+.|+++.+.+..|.+.|.... +
T Consensus 239 ~~L~~~---------g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~----------------------------~ 281 (329)
T COG1087 239 KYLKEG---------GSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIA----------------------------P 281 (329)
T ss_pred HHHHhC---------CceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeC----------------------------C
Confidence 987543 222699999999999999999999999988764322 1
Q ss_pred CCCCcHHhhhhhcccceecHHHHHHhcCCCCCC-ChHHHHHHHHHHHHh
Q 017760 212 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV-SPREGMAATISYWQD 259 (366)
Q Consensus 212 ~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~-~~~e~l~~~v~~~~~ 259 (366)
++.=.|.. .+-|.+||+++|||+|++ ++++.++++..|.+.
T Consensus 282 RR~GDpa~-------l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~~ 323 (329)
T COG1087 282 RRAGDPAI-------LVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQ 323 (329)
T ss_pred CCCCCCce-------eEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhhh
Confidence 11111111 157999999999999999 999999999999973
No 11
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.93 E-value=6.1e-25 Score=211.62 Aligned_cols=157 Identities=18% Similarity=0.231 Sum_probs=117.3
Q ss_pred CCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 148 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 148 (366)
.+++++++||+++|||++. ..++.++..+.+|..+.++|++++.++|+||+|+|+++..+++ . ...
T Consensus 178 ~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~-----------~-~~~ 245 (355)
T PRK10217 178 YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVAT-----------T-GKV 245 (355)
T ss_pred hCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHh-----------c-CCC
Confidence 3567999999999999973 4677787877888777778999999999999999999999986 2 235
Q ss_pred CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760 149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY 228 (366)
Q Consensus 149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~ 228 (366)
+++||+++++++|+.|+++.+++.+|...+...++. ....+ . ++ ..+. .+.. .....
T Consensus 246 ~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~--~~~~~----~--------~~----~~~~-~~~~----~~~~~ 302 (355)
T PRK10217 246 GETYNIGGHNERKNLDVVETICELLEELAPNKPQGV--AHYRD----L--------IT----FVAD-RPGH----DLRYA 302 (355)
T ss_pred CCeEEeCCCCcccHHHHHHHHHHHhccccccccccc--ccccc----c--------ce----ecCC-CCCC----Ccccc
Confidence 689999999999999999999999986443322211 10000 0 00 0000 0101 01225
Q ss_pred ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760 229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 262 (366)
Q Consensus 229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~ 262 (366)
.|++|++++|||+|+++++++++++++||+++..
T Consensus 303 ~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~~ 336 (355)
T PRK10217 303 IDASKIARELGWLPQETFESGMRKTVQWYLANES 336 (355)
T ss_pred cCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCHH
Confidence 7999999999999999999999999999987644
No 12
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.93 E-value=1.2e-24 Score=209.18 Aligned_cols=162 Identities=15% Similarity=0.117 Sum_probs=115.4
Q ss_pred CCceEEEEeCCccccCCCC----------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEE----------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 140 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~----------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 140 (366)
.+++++++||+++|||+.. +.++.++..+.+|..+.+.+++++.++|+|++|++++++.++++
T Consensus 167 ~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~------- 239 (347)
T PRK11908 167 EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIEN------- 239 (347)
T ss_pred cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhC-------
Confidence 4678999999999999742 35678888888888777778889999999999999999999873
Q ss_pred CCCCC-CCCCccEEecCC-CCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760 141 QKGRP-IASGQPYFVSDG-FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA 218 (366)
Q Consensus 141 ~~~~~-~~~g~~y~I~~~-~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ 218 (366)
.+ ...|++|||+++ ..+|+.|+++.+.+.+|..+.....+..+. +.+ .+.+.....
T Consensus 240 ---~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-----~~~--------------~~~~~~~~~ 297 (347)
T PRK11908 240 ---KDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVK-----LVE--------------TTSGAYYGK 297 (347)
T ss_pred ---ccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccc-----ccc--------------CCchhccCc
Confidence 11 245789999987 479999999999999985432211000000 000 000000000
Q ss_pred hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760 219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 262 (366)
Q Consensus 219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~ 262 (366)
. .........|++|++++|||+|+++++++++++++|++++.+
T Consensus 298 ~-~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~~ 340 (347)
T PRK11908 298 G-YQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGHVA 340 (347)
T ss_pred C-cchhccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 0 000112246899999999999999999999999999987654
No 13
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.93 E-value=5.4e-25 Score=204.94 Aligned_cols=165 Identities=41% Similarity=0.721 Sum_probs=138.6
Q ss_pred EEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCcccccccCCCe-EEEEcc---------------------------
Q 017760 15 LVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHLLINHGV-HCIQGL--------------------------- 65 (366)
Q Consensus 15 lITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~~~~~~v-~~i~gD--------------------------- 65 (366)
|||||+||+|++|+++|+++|. ++|+++|+.++..........+. +++++|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 6999999999999999999992 48999999876654333333333 488998
Q ss_pred ------------------------------------------------------------------------------cc
Q 017760 66 ------------------------------------------------------------------------------RK 67 (366)
Q Consensus 66 ------------------------------------------------------------------------------ks 67 (366)
++
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a 160 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA 160 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence 11
Q ss_pred C-----CCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760 68 N-----NRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 142 (366)
Q Consensus 68 ~-----~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 142 (366)
. ....+.+|+|||+.||||++....+.+.+.+++|...+..|+++...+++||+|+|+||++|+++|.+. .
T Consensus 161 ~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~----~ 236 (280)
T PF01073_consen 161 NGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEP----G 236 (280)
T ss_pred cccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccc----c
Confidence 1 124699999999999999999999999999999977788999999999999999999999999987663 1
Q ss_pred CCCCCCCccEEecCCCCCC-HHHHHHHHHHhcCCCCCc-cccC
Q 017760 143 GRPIASGQPYFVSDGFPIN-TFEFIGPLLKTLDYDLPK-SWLA 183 (366)
Q Consensus 143 ~~~~~~g~~y~I~~~~~vs-~~e~~~~l~~~lg~~~~~-~~lp 183 (366)
+.....||+|+|+|++|++ +.||.+.+.+.+|++.+. +++|
T Consensus 237 ~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 237 KPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred ccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 1356789999999999999 999999999999999887 7776
No 14
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.93 E-value=3.2e-24 Score=207.81 Aligned_cols=147 Identities=15% Similarity=0.123 Sum_probs=114.0
Q ss_pred CCceEEEEeCCccccCCCC------CCHHHHHHHHHc-CCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKL-GLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG 143 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~-g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~ 143 (366)
.+++++++||+++|||++. ...+.++..+.+ +..+.++|++++.++|+|++|+++++..+++
T Consensus 185 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~----------- 253 (370)
T PLN02695 185 FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTK----------- 253 (370)
T ss_pred hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHh-----------
Confidence 4677999999999999753 235567666554 4566678999999999999999999998875
Q ss_pred CCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhh
Q 017760 144 RPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 223 (366)
Q Consensus 144 ~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~ 223 (366)
.. .+++||+++++++|+.|+++.+.+..|.+.+....| .+. ..
T Consensus 254 ~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~----------------------------~~~----~~--- 296 (370)
T PLN02695 254 SD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIP----------------------------GPE----GV--- 296 (370)
T ss_pred cc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecC----------------------------CCC----Cc---
Confidence 22 357999999999999999999999998755433221 110 00
Q ss_pred cccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccCCC
Q 017760 224 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLD 266 (366)
Q Consensus 224 ~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~~~ 266 (366)
.....|++|++++|||+|+++++++|+++++|++++....+.
T Consensus 297 -~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~~~~~~~ 338 (370)
T PLN02695 297 -RGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEKEKA 338 (370)
T ss_pred -cccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 012479999999999999999999999999999887665543
No 15
>PLN02427 UDP-apiose/xylose synthase
Probab=99.92 E-value=3.2e-24 Score=209.14 Aligned_cols=157 Identities=13% Similarity=0.094 Sum_probs=111.1
Q ss_pred CCceEEEEeCCccccCCCC-------------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccC
Q 017760 71 KCLYTCAVRPAAIYGPGEE-------------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 137 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~-------------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 137 (366)
.+++++++||++||||++. ..++.++..+.+++.+.+.|++++.++|+||+|+|++++.++++
T Consensus 200 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~---- 275 (386)
T PLN02427 200 NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIEN---- 275 (386)
T ss_pred cCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhC----
Confidence 3689999999999999753 12344556677788778888889999999999999999999872
Q ss_pred CCCCCCCCCCCCccEEecCC-CCCCHHHHHHHHHHhcCCCCC-cc-ccCHHHHHHHHHHHHHHHHhhhhccccccCCCCC
Q 017760 138 IPGQKGRPIASGQPYFVSDG-FPINTFEFIGPLLKTLDYDLP-KS-WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 214 (366)
Q Consensus 138 ~~~~~~~~~~~g~~y~I~~~-~~vs~~e~~~~l~~~lg~~~~-~~-~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~ 214 (366)
.....|++||++++ +++|+.|+++.+.+.+|.... .. ..+. . ..+...
T Consensus 276 ------~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--~---------------------~~~~~~ 326 (386)
T PLN02427 276 ------PARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPT--V---------------------DVSSKE 326 (386)
T ss_pred ------cccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccc--c---------------------ccCccc
Confidence 11245789999987 589999999999999984211 00 0000 0 000100
Q ss_pred CcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 215 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 215 l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
..+.. ..-......|++|++++|||+|+++++++|+++++|+++.-
T Consensus 327 ~~~~~-~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~~ 372 (386)
T PLN02427 327 FYGEG-YDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKTY 372 (386)
T ss_pred ccCcc-ccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHHH
Confidence 00000 00011225699999999999999999999999999987643
No 16
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.92 E-value=2.6e-24 Score=206.91 Aligned_cols=153 Identities=16% Similarity=0.161 Sum_probs=114.9
Q ss_pred CceEEEEeCCccccCCC---CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPGE---ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 148 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~---~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 148 (366)
+++++++||+++|||++ .+.++.++..+.+|..+ .++++++.++|+|++|+|+|++.+++++.+ .+...
T Consensus 178 ~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~-~~~~g~~~rd~i~v~D~a~a~~~~~~~~~~-------~~~~~ 249 (349)
T TIGR02622 178 GIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIV-IIRNPDATRPWQHVLEPLSGYLLLAEKLFT-------GQAEF 249 (349)
T ss_pred CCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCe-EECCCCcccceeeHHHHHHHHHHHHHHHhh-------cCccc
Confidence 78999999999999985 35678888888888764 467889999999999999999998874322 11233
Q ss_pred CccEEecCC--CCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhccc
Q 017760 149 GQPYFVSDG--FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT 226 (366)
Q Consensus 149 g~~y~I~~~--~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~ 226 (366)
+++|||+++ ++++..|+++.+.+.++.....+.. +.....+.+. ..
T Consensus 250 ~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~----~~ 297 (349)
T TIGR02622 250 AGAWNFGPRASDNARVVELVVDALEFWWGDDAEWED----------------------------DSDLNHPHEA----RL 297 (349)
T ss_pred cceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceee----------------------------ccCCCCCccc----ce
Confidence 579999964 7899999999999887632111111 0001111111 12
Q ss_pred ceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccccC
Q 017760 227 HYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 264 (366)
Q Consensus 227 ~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~~ 264 (366)
...|++|++++|||+|+++++++++++++|+++.-+..
T Consensus 298 ~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~~~~~ 335 (349)
T TIGR02622 298 LKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAWLRGE 335 (349)
T ss_pred eecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 35799999999999999999999999999998876554
No 17
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.92 E-value=3.5e-24 Score=222.06 Aligned_cols=162 Identities=14% Similarity=0.085 Sum_probs=118.0
Q ss_pred CCceEEEEeCCccccCCCC----------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEE----------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 140 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~----------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 140 (366)
.+++++++||+++|||++. +.++.++..+.+|+.+.+.|++++.++|+|++|+|++++.++++
T Consensus 481 ~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~------- 553 (660)
T PRK08125 481 EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIEN------- 553 (660)
T ss_pred cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhc-------
Confidence 3688999999999999853 35778888888888877889999999999999999999999873
Q ss_pred CCCCC-CCCCccEEecCCC-CCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760 141 QKGRP-IASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA 218 (366)
Q Consensus 141 ~~~~~-~~~g~~y~I~~~~-~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ 218 (366)
.+ ...|++|||++++ .+|+.|+++.+.+.+|.+.....+|...... +. +.....+
T Consensus 554 ---~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~-------------~~------~~~~~~~- 610 (660)
T PRK08125 554 ---KDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFR-------------VV------ESSSYYG- 610 (660)
T ss_pred ---cccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCcccccc-------------cc------ccccccc-
Confidence 11 2357899999985 7999999999999999653333332211000 00 0000000
Q ss_pred hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760 219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 262 (366)
Q Consensus 219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~ 262 (366)
...........|++|++++|||+|+++++++|+++++||+++..
T Consensus 611 ~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~ 654 (660)
T PRK08125 611 KGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_pred cccccccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccc
Confidence 00000112247999999999999999999999999999987654
No 18
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.2e-24 Score=192.35 Aligned_cols=153 Identities=16% Similarity=0.220 Sum_probs=123.5
Q ss_pred CCCCCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCC
Q 017760 68 NNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP 145 (366)
Q Consensus 68 ~~~~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~ 145 (366)
..+++++++++|.++||||+.- ..+|+++..++.+....+.|+|.+.++|+||+|+++|+..+.++
T Consensus 172 ~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K------------ 239 (331)
T KOG0747|consen 172 GRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK------------ 239 (331)
T ss_pred hhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc------------
Confidence 5678999999999999999873 57899999998999889999999999999999999999999962
Q ss_pred CCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcc
Q 017760 146 IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGV 225 (366)
Q Consensus 146 ~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~ 225 (366)
...|++|||+++.+.++-|+++.+.+..++..+....+.+... .+.++. .+.
T Consensus 240 g~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~---------------------v~dRp~-------nd~ 291 (331)
T KOG0747|consen 240 GELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFF---------------------VEDRPY-------NDL 291 (331)
T ss_pred CCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCccee---------------------cCCCCc-------ccc
Confidence 5579999999999999999999999999876553322211100 011111 111
Q ss_pred cceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 226 THYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 226 ~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
....|++|++ .|||+|+++++++|+++++||.++.
T Consensus 292 Ry~~~~eKik-~LGw~~~~p~~eGLrktie~y~~~~ 326 (331)
T KOG0747|consen 292 RYFLDDEKIK-KLGWRPTTPWEEGLRKTIEWYTKNF 326 (331)
T ss_pred cccccHHHHH-hcCCcccCcHHHHHHHHHHHHHhhh
Confidence 1357999999 7999999999999999999998765
No 19
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.92 E-value=8e-24 Score=203.06 Aligned_cols=162 Identities=19% Similarity=0.177 Sum_probs=107.9
Q ss_pred CCceEEEEeCCccccCCCCC-----CHHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEER-----HLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR 144 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~~-----~l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~ 144 (366)
.+++++..|+.++|||+... .+..++..+..|+. ...+|++++.++|+||+|+|++++.++++
T Consensus 174 ~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~----------- 242 (343)
T TIGR01472 174 YGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQ----------- 242 (343)
T ss_pred hCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhc-----------
Confidence 46778889999999997431 23445556666753 45569999999999999999999999862
Q ss_pred CCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhc
Q 017760 145 PIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG 224 (366)
Q Consensus 145 ~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~ 224 (366)
+ .++.|||++++++|+.|+++.+.+.+|.+.+....|.... ....+.. ... .. .......+.++..
T Consensus 243 ~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~-~~~---~~---~~~~~~~~~~~~~-- 308 (343)
T TIGR01472 243 D--KPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEV---GRCKETG-KVH---VE---IDPRYFRPTEVDL-- 308 (343)
T ss_pred C--CCccEEecCCCceeHHHHHHHHHHHcCCCccccccccccc---ccccccC-cee---EE---eCccccCCCccch--
Confidence 2 2358999999999999999999999996542111000000 0000000 000 00 0011112222211
Q ss_pred ccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHh
Q 017760 225 VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 259 (366)
Q Consensus 225 ~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~ 259 (366)
...|++|++++|||+|+++++|+|++++++|++
T Consensus 309 --~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 309 --LLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred --hcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 146999999999999999999999999999974
No 20
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.91 E-value=1.9e-23 Score=217.25 Aligned_cols=146 Identities=18% Similarity=0.243 Sum_probs=115.9
Q ss_pred CCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 148 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 148 (366)
.+++++++||++||||++. ..++.++..+.+|..+.+.|++++.++|+||+|+|+++..++++ ...
T Consensus 177 ~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~------------~~~ 244 (668)
T PLN02260 177 YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK------------GEV 244 (668)
T ss_pred cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhc------------CCC
Confidence 4778999999999999873 46788888888888878889999999999999999999998852 234
Q ss_pred CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760 149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY 228 (366)
Q Consensus 149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~ 228 (366)
+++||+++++++|+.|+++.+++.+|.+.+.. +. +.+.++.. .....
T Consensus 245 ~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~-i~-------------------------~~~~~p~~-------~~~~~ 291 (668)
T PLN02260 245 GHVYNIGTKKERRVIDVAKDICKLFGLDPEKS-IK-------------------------FVENRPFN-------DQRYF 291 (668)
T ss_pred CCEEEECCCCeeEHHHHHHHHHHHhCCCCcce-ee-------------------------ecCCCCCC-------cceee
Confidence 68999999999999999999999999754311 00 00111111 11235
Q ss_pred ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760 229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 262 (366)
Q Consensus 229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~ 262 (366)
.|++|++ +|||+|+++++|+++++++||+++..
T Consensus 292 ~d~~k~~-~lGw~p~~~~~egl~~~i~w~~~~~~ 324 (668)
T PLN02260 292 LDDQKLK-KLGWQERTSWEEGLKKTMEWYTSNPD 324 (668)
T ss_pred cCHHHHH-HcCCCCCCCHHHHHHHHHHHHHhChh
Confidence 7999997 59999999999999999999987654
No 21
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.91 E-value=2e-23 Score=206.42 Aligned_cols=152 Identities=17% Similarity=0.180 Sum_probs=113.1
Q ss_pred CceEEEEeCCccccCCCC-------------------CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760 72 CLYTCAVRPAAIYGPGEE-------------------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~-------------------~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 132 (366)
+++++++||+++|||++. ..++.++..+.+|+.+.++|++++.+||+||+|+|++++.+++
T Consensus 247 gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~ 326 (442)
T PLN02572 247 GIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIA 326 (442)
T ss_pred CCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHh
Confidence 677999999999999853 2355666777778877788999999999999999999999986
Q ss_pred ccccCCCCCCCCCCCCC--ccEEecCCCCCCHHHHHHHHHHh---cCCCCCccccCHHHHHHHHHHHHHHHHhhhhcccc
Q 017760 133 GLLDDIPGQKGRPIASG--QPYFVSDGFPINTFEFIGPLLKT---LDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNR 207 (366)
Q Consensus 133 ~l~~~~~~~~~~~~~~g--~~y~I~~~~~vs~~e~~~~l~~~---lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~ 207 (366)
. ....| ++||+++ +++|+.|+++.+.+. +|.+.+....|
T Consensus 327 ~-----------~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~~~~~~p------------------------ 370 (442)
T PLN02572 327 N-----------PAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDVEVISVP------------------------ 370 (442)
T ss_pred C-----------hhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCCCeeeCC------------------------
Confidence 2 22233 5899976 679999999999999 88654432221
Q ss_pred ccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCC---ChHHHHHHHHHHHHhccccCCCCCc
Q 017760 208 WWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV---SPREGMAATISYWQDRKRKSLDGPT 269 (366)
Q Consensus 208 ~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~---~~~e~l~~~v~~~~~~~~~~~~~~~ 269 (366)
.+. ...+ ......|.+|+++ |||+|++ ++++++.++++||+++-....-.|.
T Consensus 371 ----~~~-~~~~----~~~~~~d~~k~~~-LGw~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 425 (442)
T PLN02572 371 ----NPR-VEAE----EHYYNAKHTKLCE-LGLEPHLLSDSLLDSLLNFAVKYKDRVDTTLILPA 425 (442)
T ss_pred ----CCc-cccc----ccccCccHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHhhcchhhcccc
Confidence 111 0101 1122468999975 9999998 8999999999999876665544443
No 22
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.91 E-value=6.2e-23 Score=196.63 Aligned_cols=146 Identities=18% Similarity=0.181 Sum_probs=107.8
Q ss_pred CCceEEEEeCCccccCCCCC-C----HHHHHHHHHcCCCCe-eecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEER-H----LPRIVSLAKLGLVPF-KIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR 144 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~~-~----l~~~i~~~~~g~~~~-~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~ 144 (366)
.+++++..|+.++|||+... . +..++..+.+|+... ..|++++.++|+||+|+|+|++.++++
T Consensus 180 ~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~----------- 248 (340)
T PLN02653 180 YGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQ----------- 248 (340)
T ss_pred cCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhc-----------
Confidence 35567888999999996532 2 334455566776544 458999999999999999999999972
Q ss_pred CCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCC-ccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhh
Q 017760 145 PIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 223 (366)
Q Consensus 145 ~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~-~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~ 223 (366)
. .++.||+++++++|+.|+++.+.+.+|.+.+ ...+ ..+...+.++.
T Consensus 249 ~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~----------------------------~~~~~~~~~~~-- 296 (340)
T PLN02653 249 E--KPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEI----------------------------DPRYFRPAEVD-- 296 (340)
T ss_pred C--CCCcEEecCCCceeHHHHHHHHHHHcCCCCCcceee----------------------------CcccCCccccc--
Confidence 2 2468999999999999999999999996421 1111 11112222222
Q ss_pred cccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 224 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 224 ~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
....|++|++++|||+|+++++++|+++++||++.-
T Consensus 297 --~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~~~ 332 (340)
T PLN02653 297 --NLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLELA 332 (340)
T ss_pred --cccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence 124699999999999999999999999999998643
No 23
>PLN02240 UDP-glucose 4-epimerase
Probab=99.91 E-value=1.1e-22 Score=195.66 Aligned_cols=151 Identities=18% Similarity=0.142 Sum_probs=110.1
Q ss_pred CCceEEEEeCCccccCCCC-----------CCHHHHHHHHHcCC--CCeeec------CCCcceeceeHHHHHHHHHHHH
Q 017760 71 KCLYTCAVRPAAIYGPGEE-----------RHLPRIVSLAKLGL--VPFKIG------EPSVKTDWIYVDNLVLALILAS 131 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~-----------~~l~~~i~~~~~g~--~~~~~g------~~~~~~~~v~vdDla~a~~~a~ 131 (366)
.+++++++|++++||++.. ..+..++..+..++ .+.+.| ++.+.++|+|++|+|++++.++
T Consensus 175 ~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~ 254 (352)
T PLN02240 175 PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAAL 254 (352)
T ss_pred CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHH
Confidence 4678999999999997431 11223444455443 233444 6789999999999999999998
Q ss_pred hccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCC
Q 017760 132 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP 211 (366)
Q Consensus 132 ~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~ 211 (366)
+.+.+ +....+++||+++++++|+.|+++.+.+.+|.+.+....| .
T Consensus 255 ~~~~~-------~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~---------------------------~ 300 (352)
T PLN02240 255 RKLFT-------DPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAP---------------------------R 300 (352)
T ss_pred hhhhh-------ccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCC---------------------------C
Confidence 75322 1234568999999999999999999999999765533221 0
Q ss_pred CCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760 212 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 263 (366)
Q Consensus 212 ~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~ 263 (366)
.+ .+. .....|++|++++|||+|+++++++|+++++|+++++..
T Consensus 301 ~~----~~~----~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~~ 344 (352)
T PLN02240 301 RP----GDA----EEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNPYG 344 (352)
T ss_pred CC----CCh----hhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCccc
Confidence 01 011 122468999999999999999999999999999987644
No 24
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.90 E-value=6e-23 Score=193.86 Aligned_cols=145 Identities=23% Similarity=0.321 Sum_probs=115.3
Q ss_pred CCceEEEEeCCccccCCC--CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGE--ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 148 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~--~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 148 (366)
.+++++++||+.+|||+. ...++.++..+..+..+..++++++.++|+|++|+++++..+++ . ...
T Consensus 168 ~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~-----------~-~~~ 235 (317)
T TIGR01181 168 YGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLE-----------K-GRV 235 (317)
T ss_pred hCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHc-----------C-CCC
Confidence 467899999999999975 35678888888888877788999999999999999999999986 2 345
Q ss_pred CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760 149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY 228 (366)
Q Consensus 149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~ 228 (366)
+++||+++++++|+.|+++.+.+.+|.+.+.... ... .+.+ .....
T Consensus 236 ~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~---------------------------~~~---~~~~----~~~~~ 281 (317)
T TIGR01181 236 GETYNIGGGNERTNLEVVETILELLGKDEDLITH---------------------------VED---RPGH----DRRYA 281 (317)
T ss_pred CceEEeCCCCceeHHHHHHHHHHHhCCCcccccc---------------------------cCC---Cccc----hhhhc
Confidence 6899999999999999999999999865332110 000 0001 01124
Q ss_pred ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
.|++|++++|||+|+++++++++++++||+++.
T Consensus 282 ~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~ 314 (317)
T TIGR01181 282 IDASKIKRELGWAPKYTFEEGLRKTVQWYLDNE 314 (317)
T ss_pred CCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 799999999999999999999999999998764
No 25
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.90 E-value=7.5e-23 Score=196.85 Aligned_cols=152 Identities=18% Similarity=0.232 Sum_probs=115.5
Q ss_pred CCceEEEEeCCccccCCCC--CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 148 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~--~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 148 (366)
.+++.+++|++.+|||++. +.++.++..+..+..+.++|++++.++|+||+|+|+++..+++ . ...
T Consensus 185 ~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~-----------~-~~~ 252 (352)
T PRK10084 185 YGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVT-----------E-GKA 252 (352)
T ss_pred hCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHh-----------c-CCC
Confidence 3677999999999999863 5677787878777776778999999999999999999998886 2 235
Q ss_pred CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760 149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY 228 (366)
Q Consensus 149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~ 228 (366)
+++||+++++++|+.|+++.+++.+|...|. ..|... .+. +.+.. +.. .....
T Consensus 253 ~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~-~~~~~~---------~~~----------~~~~~---~~~----~~~~~ 305 (352)
T PRK10084 253 GETYNIGGHNEKKNLDVVLTICDLLDEIVPK-ATSYRE---------QIT----------YVADR---PGH----DRRYA 305 (352)
T ss_pred CceEEeCCCCcCcHHHHHHHHHHHhcccccc-ccchhh---------hcc----------ccccC---CCC----Cceee
Confidence 7899999999999999999999999864332 111100 000 00010 001 01225
Q ss_pred ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
+|++|+++++||+|+++++++|+++++||+++.
T Consensus 306 ~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~ 338 (352)
T PRK10084 306 IDASKISRELGWKPQETFESGIRKTVEWYLANT 338 (352)
T ss_pred eCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhCH
Confidence 799999999999999999999999999998864
No 26
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.89 E-value=1.8e-22 Score=191.63 Aligned_cols=221 Identities=14% Similarity=0.099 Sum_probs=158.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------- 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------- 65 (366)
|+|+|||||||+|++++++|+++| ++|++++|+.... ..+...+++++.+|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g-~~V~~l~R~~~~~--~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~ 77 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEG-YQVRCLVRNLRKA--SFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPS 77 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcChHHh--hhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCC
Confidence 489999999999999999999999 5999999875322 11122356666666
Q ss_pred ----------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCCHH
Q 017760 66 ----------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERHLP 93 (366)
Q Consensus 66 ----------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~l~ 93 (366)
+.....+++++++||+.+|+.- +.
T Consensus 78 ~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~~----~~ 153 (317)
T CHL00194 78 DLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYPYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQGL----IS 153 (317)
T ss_pred CccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccCCChHHHHHHHHHHHHHHcCCCeEEEeecHHhhhh----hh
Confidence 0023457899999999998642 22
Q ss_pred HHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhc
Q 017760 94 RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTL 173 (366)
Q Consensus 94 ~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~l 173 (366)
.....+..+.. ...+++++.++|+|++|+|+++..+++ .+...+++||+++++++|+.|+++.+.+.+
T Consensus 154 ~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~-----------~~~~~~~~~ni~g~~~~s~~el~~~~~~~~ 221 (317)
T CHL00194 154 QYAIPILEKQP-IWITNESTPISYIDTQDAAKFCLKSLS-----------LPETKNKTFPLVGPKSWNSSEIISLCEQLS 221 (317)
T ss_pred hhhhhhccCCc-eEecCCCCccCccCHHHHHHHHHHHhc-----------CccccCcEEEecCCCccCHHHHHHHHHHHh
Confidence 22222233443 334556677899999999999999986 445568999999999999999999999999
Q ss_pred CCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCC--CChHHHHH
Q 017760 174 DYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPI--VSPREGMA 251 (366)
Q Consensus 174 g~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~--~~~~e~l~ 251 (366)
|.+.+...+|.+...+.+.+.+.+..... ....+...++...+.+..++.+++++.||+.|. .+++++++
T Consensus 222 g~~~~~~~vp~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~ 293 (317)
T CHL00194 222 GQKAKISRVPLFLLKLLRQITGFFEWTWN--------ISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQ 293 (317)
T ss_pred CCCCeEEeCCHHHHHHHHHHHhhcccchh--------hHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHH
Confidence 99888888999998888777664421000 122233334444444456788899999999984 47888888
Q ss_pred HHHHHHHh
Q 017760 252 ATISYWQD 259 (366)
Q Consensus 252 ~~v~~~~~ 259 (366)
++++-.++
T Consensus 294 ~~~~~~~~ 301 (317)
T CHL00194 294 EYFERILK 301 (317)
T ss_pred HHHHHHHH
Confidence 87765443
No 27
>PLN02214 cinnamoyl-CoA reductase
Probab=99.88 E-value=8.6e-22 Score=188.95 Aligned_cols=201 Identities=19% Similarity=0.210 Sum_probs=138.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---cccc--CCCeEEEEcc------------------
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLLI--NHGVHCIQGL------------------ 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~~--~~~v~~i~gD------------------ 65 (366)
.++++|+||||+||+|++++++|+++| ++|++++|+...... ..+. ..+++++.+|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 86 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERG-YTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF 86 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence 346789999999999999999999999 599999987543110 0111 1346677777
Q ss_pred -----------------------------------------------cc-------------------------------
Q 017760 66 -----------------------------------------------RK------------------------------- 67 (366)
Q Consensus 66 -----------------------------------------------ks------------------------------- 67 (366)
..
T Consensus 87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~ 166 (342)
T PLN02214 87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKM 166 (342)
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHH
Confidence 00
Q ss_pred ---------CCCCCceEEEEeCCccccCCCCCC----HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhcc
Q 017760 68 ---------NNRKCLYTCAVRPAAIYGPGEERH----LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 134 (366)
Q Consensus 68 ---------~~~~~l~~~ilRp~~iyGp~~~~~----l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 134 (366)
....+++++++||++||||++... +..++. +..|.... .+ +..++|+||+|+|++++++++
T Consensus 167 ~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~-~~~g~~~~-~~--~~~~~~i~V~Dva~a~~~al~-- 240 (342)
T PLN02214 167 VAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLK-YLTGSAKT-YA--NLTQAYVDVRDVALAHVLVYE-- 240 (342)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHH-HHcCCccc-CC--CCCcCeeEHHHHHHHHHHHHh--
Confidence 112367899999999999986422 233333 33454432 33 456899999999999999997
Q ss_pred ccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCC
Q 017760 135 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 214 (366)
Q Consensus 135 ~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~ 214 (366)
.+. .++.||+++ .+.++.|+++.+.+.++.. .+|... .+.
T Consensus 241 ---------~~~-~~g~yn~~~-~~~~~~el~~~i~~~~~~~----~~~~~~-------------------------~~~ 280 (342)
T PLN02214 241 ---------APS-ASGRYLLAE-SARHRGEVVEILAKLFPEY----PLPTKC-------------------------KDE 280 (342)
T ss_pred ---------Ccc-cCCcEEEec-CCCCHHHHHHHHHHHCCCC----CCCCCC-------------------------ccc
Confidence 322 345899987 4689999999999998621 111100 000
Q ss_pred CcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760 215 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 263 (366)
Q Consensus 215 l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~ 263 (366)
..+ . .....+|++|++ +|||+|. +++|+|+++++|+++.+.-
T Consensus 281 ~~~-~----~~~~~~d~~k~~-~LG~~p~-~lee~i~~~~~~~~~~~~~ 322 (342)
T PLN02214 281 KNP-R----AKPYKFTNQKIK-DLGLEFT-STKQSLYDTVKSLQEKGHL 322 (342)
T ss_pred cCC-C----CCccccCcHHHH-HcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence 000 0 112258999998 5999994 9999999999999887644
No 28
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.88 E-value=2.2e-21 Score=185.47 Aligned_cols=146 Identities=14% Similarity=0.097 Sum_probs=104.3
Q ss_pred CceEEEEeCCccccCCC--------CC----CHHHHHHHHHcC-CC-Ceeec------CCCcceeceeHHHHHHHHHHHH
Q 017760 72 CLYTCAVRPAAIYGPGE--------ER----HLPRIVSLAKLG-LV-PFKIG------EPSVKTDWIYVDNLVLALILAS 131 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~--------~~----~l~~~i~~~~~g-~~-~~~~g------~~~~~~~~v~vdDla~a~~~a~ 131 (366)
+++++++|++.+||+.. .. +++.+ ..+..+ .. +.+.| ++++.++|+|++|+|++++.++
T Consensus 169 ~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~ 247 (338)
T PRK10675 169 DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI-AQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAM 247 (338)
T ss_pred CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHH-HHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHH
Confidence 67899999999998742 11 22333 333333 22 23333 5678899999999999999998
Q ss_pred hccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCC
Q 017760 132 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP 211 (366)
Q Consensus 132 ~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~ 211 (366)
+.. .....+++||+++++++|+.|+++.+.+.+|.+.+....|
T Consensus 248 ~~~---------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---------------------------- 290 (338)
T PRK10675 248 EKL---------ANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAP---------------------------- 290 (338)
T ss_pred Hhh---------hccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCC----------------------------
Confidence 631 1123457999999999999999999999999765432211
Q ss_pred CCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760 212 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 262 (366)
Q Consensus 212 ~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~ 262 (366)
. .+.+. .....|++|+++++||+|+++++++++++++|++++..
T Consensus 291 --~-~~~~~----~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~~~ 334 (338)
T PRK10675 291 --R-REGDL----PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ 334 (338)
T ss_pred --C-CCCch----hhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhhhh
Confidence 0 00011 11247999999999999999999999999999988643
No 29
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.88 E-value=1.9e-21 Score=183.82 Aligned_cols=144 Identities=16% Similarity=0.181 Sum_probs=109.6
Q ss_pred CCceEEEEeCCccccCCCC------CCHHHHHHHHHcCCCCeee------cCCCcceeceeHHHHHHHHHHHHhccccCC
Q 017760 71 KCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKI------GEPSVKTDWIYVDNLVLALILASMGLLDDI 138 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~~~g~~~~~~------g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 138 (366)
.+++++++||+++|||++. ..+..++..+.++..+.++ +++++.++|+|++|+++++..+++
T Consensus 158 ~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~------ 231 (314)
T TIGR02197 158 LSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLE------ 231 (314)
T ss_pred cCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHh------
Confidence 3568999999999999863 3456677777777765554 467788999999999999999996
Q ss_pred CCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHH
Q 017760 139 PGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA 218 (366)
Q Consensus 139 ~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ 218 (366)
. ..+++||+++++++|+.|+++.+.+.+|.+.+....|.+ .....
T Consensus 232 -----~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------------~~~~~-- 276 (314)
T TIGR02197 232 -----N--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMP--------------------------EALRG-- 276 (314)
T ss_pred -----c--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCc--------------------------ccccc--
Confidence 3 345699999999999999999999999976432222211 10000
Q ss_pred hhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHH
Q 017760 219 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ 258 (366)
Q Consensus 219 ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~ 258 (366)
........|++|+++++||+|+++++++++++++|++
T Consensus 277 ---~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 277 ---KYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred ---ccccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence 0011124799999999999999999999999999985
No 30
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.87 E-value=3.6e-21 Score=181.57 Aligned_cols=144 Identities=24% Similarity=0.387 Sum_probs=112.4
Q ss_pred CceEEEEeCCccccCCCCC-----CHHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPGEER-----HLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP 145 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~-----~l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~ 145 (366)
+++++++||+++|||++.. ....++..+..+.. ....++++..++++|++|++++++.++++ +
T Consensus 161 ~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-----------~ 229 (314)
T COG0451 161 GLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALEN-----------P 229 (314)
T ss_pred CCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhC-----------C
Confidence 5899999999999999864 34445555677775 55567888889999999999999999973 2
Q ss_pred CCCCccEEecCCC-CCCHHHHHHHHHHhcCCCCCc-cccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhh
Q 017760 146 IASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPK-SWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 223 (366)
Q Consensus 146 ~~~g~~y~I~~~~-~vs~~e~~~~l~~~lg~~~~~-~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~ 223 (366)
. .+ .||++++. +.++.|+++.+.+.+|.+.+. ... +. ......
T Consensus 230 ~-~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~----------------------------~~-----~~~~~~ 274 (314)
T COG0451 230 D-GG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYI----------------------------PL-----GRRGDL 274 (314)
T ss_pred C-Cc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeec----------------------------CC-----CCCCcc
Confidence 2 23 99999997 899999999999999987652 111 10 111222
Q ss_pred cccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 224 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 224 ~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
.....+|++|+++++||+|.+++++++.++++|+....
T Consensus 275 ~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 275 REGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred cccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 33446899999999999999999999999999997654
No 31
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.87 E-value=2.7e-21 Score=185.07 Aligned_cols=141 Identities=14% Similarity=0.093 Sum_probs=96.5
Q ss_pred CCceEEEEeCCccccCCCCCCHHH---HHHHHHcCCCCeeec-CCC----cceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEERHLPR---IVSLAKLGLVPFKIG-EPS----VKTDWIYVDNLVLALILASMGLLDDIPGQK 142 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~~~l~~---~i~~~~~g~~~~~~g-~~~----~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 142 (366)
.+++++++||++||||++....+. ++..+.+++...+.| ++. ..++|+||+|+|++++.+++
T Consensus 186 ~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~---------- 255 (338)
T PLN00198 186 NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAE---------- 255 (338)
T ss_pred cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhh----------
Confidence 367899999999999986432222 233455565544444 222 23799999999999999986
Q ss_pred CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760 143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK 222 (366)
Q Consensus 143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~ 222 (366)
... .++.| ++++.++|+.|+++.+.+.++... +|.... ..+.
T Consensus 256 -~~~-~~~~~-~~~~~~~s~~el~~~i~~~~~~~~----~~~~~~-----------------------~~~~-------- 297 (338)
T PLN00198 256 -KES-ASGRY-ICCAANTSVPELAKFLIKRYPQYQ----VPTDFG-----------------------DFPS-------- 297 (338)
T ss_pred -CcC-cCCcE-EEecCCCCHHHHHHHHHHHCCCCC----CCcccc-----------------------ccCC--------
Confidence 222 23467 455677999999999998886321 111000 1110
Q ss_pred hcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 223 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 223 ~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
......|++|+++ +||+|+++++++|+++++||++++
T Consensus 298 -~~~~~~~~~k~~~-~G~~p~~~l~~gi~~~~~~~~~~~ 334 (338)
T PLN00198 298 -KAKLIISSEKLIS-EGFSFEYGIEEIYDQTVEYFKAKG 334 (338)
T ss_pred -CCccccChHHHHh-CCceecCcHHHHHHHHHHHHHHcC
Confidence 0122478999988 599999999999999999998754
No 32
>PRK05865 hypothetical protein; Provisional
Probab=99.87 E-value=3e-21 Score=200.97 Aligned_cols=197 Identities=17% Similarity=0.137 Sum_probs=137.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------- 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------- 65 (366)
|+|+||||+||+|+++++.|+++| ++|++++++.+... ..+++++++|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G-~~Vv~l~R~~~~~~-----~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~ 74 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQG-HEVVGIARHRPDSW-----PSSADFIAADIRDATAVESAMTGADVVAHCAWVRGR 74 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCchhhc-----ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccc
Confidence 479999999999999999999999 59999998743211 1234555555
Q ss_pred -----------------c-------------------cCCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeec
Q 017760 66 -----------------R-------------------KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIG 109 (366)
Q Consensus 66 -----------------k-------------------s~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g 109 (366)
+ .....+++++++||+++|||+.. .++..+.. ......|
T Consensus 75 ~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~K~aaE~ll~~~gl~~vILRp~~VYGP~~~----~~i~~ll~-~~v~~~G 149 (854)
T PRK05865 75 NDHINIDGTANVLKAMAETGTGRIVFTSSGHQPRVEQMLADCGLEWVAVRCALIFGRNVD----NWVQRLFA-LPVLPAG 149 (854)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHcCCCEEEEEeceEeCCChH----HHHHHHhc-CceeccC
Confidence 0 01245899999999999999732 23333322 2223335
Q ss_pred CCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHH
Q 017760 110 EPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALF 189 (366)
Q Consensus 110 ~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~ 189 (366)
+++..++|+|++|+|+++..+++ .+...+++||+++++++|+.|+++.+.+... .++.+....
T Consensus 150 ~~~~~~dfIhVdDVA~Ai~~aL~-----------~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~------~v~~~~~~~ 212 (854)
T PRK05865 150 YADRVVQVVHSDDAQRLLVRALL-----------DTVIDSGPVNLAAPGELTFRRIAAALGRPMV------PIGSPVLRR 212 (854)
T ss_pred CCCceEeeeeHHHHHHHHHHHHh-----------CCCcCCCeEEEECCCcccHHHHHHHHhhhhc------cCCchhhhh
Confidence 55667799999999999999986 2333467999999999999999998876431 111111000
Q ss_pred HHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhc
Q 017760 190 LGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 260 (366)
Q Consensus 190 ~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~ 260 (366)
. . ...+..........|++|++++|||+|+++++++|+++++||+.+
T Consensus 213 -----------~---------~----~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 213 -----------V---------T----SFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred -----------c---------c----chhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 0 0 001111111122579999999999999999999999999999864
No 33
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.87 E-value=8.8e-21 Score=180.48 Aligned_cols=137 Identities=16% Similarity=0.212 Sum_probs=98.3
Q ss_pred CceEEEEeCCccccCCCCC---CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPGEER---HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 148 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~---~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 148 (366)
+++++++||+++|||+... +...++..+.+|+.+. + ...++|+||+|+|++++.+++ .+. .
T Consensus 183 ~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l~-----------~~~-~ 246 (325)
T PLN02989 183 EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKALE-----------TPS-A 246 (325)
T ss_pred CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHhc-----------Ccc-c
Confidence 6789999999999998643 4445565666665432 2 345799999999999999986 222 2
Q ss_pred CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhc-ccc
Q 017760 149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG-VTH 227 (366)
Q Consensus 149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~-~~~ 227 (366)
++.||++ +.++|+.|+++.+.+.++.. . ++ ..+ .+..... ...
T Consensus 247 ~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~---~~---------------------------~~~----~~~~~~~~~~~ 290 (325)
T PLN02989 247 NGRYIID-GPVVTIKDIENVLREFFPDL-C---IA---------------------------DRN----EDITELNSVTF 290 (325)
T ss_pred CceEEEe-cCCCCHHHHHHHHHHHCCCC-C---CC---------------------------CCC----CCcccccccCc
Confidence 4589995 55899999999999999732 1 10 000 0110001 122
Q ss_pred eecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 228 YFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 228 ~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
..|++|+++ |||.|.++++++|+++++|+++.+
T Consensus 291 ~~~~~k~~~-lg~~p~~~l~~gi~~~~~~~~~~~ 323 (325)
T PLN02989 291 NVCLDKVKS-LGIIEFTPTETSLRDTVLSLKEKC 323 (325)
T ss_pred CCCHHHHHH-cCCCCCCCHHHHHHHHHHHHHHhC
Confidence 568999886 999999999999999999997654
No 34
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.86 E-value=4.9e-21 Score=180.37 Aligned_cols=143 Identities=13% Similarity=0.123 Sum_probs=103.7
Q ss_pred CceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecC--CCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGE--PSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG 149 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~--~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g 149 (366)
..+++++||+++|||+.+++++.+++.+.+++.+.++++ +...+++.++||+++++..+++ .+ ..+
T Consensus 143 ~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~-----------~~-~~~ 210 (299)
T PRK09987 143 CAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALN-----------KP-EVA 210 (299)
T ss_pred CCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhc-----------cC-CCC
Confidence 345899999999999887788888988888888788887 5666667778888888887774 22 224
Q ss_pred ccEEecCCCCCCHHHHHHHHHHhc---CCCCC---ccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhh
Q 017760 150 QPYFVSDGFPINTFEFIGPLLKTL---DYDLP---KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 223 (366)
Q Consensus 150 ~~y~I~~~~~vs~~e~~~~l~~~l---g~~~~---~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~ 223 (366)
++||+++++++|+.|+++.+.+.+ |.+.+ ...+|.... +.+.-.|
T Consensus 211 giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~-----------------------~~~~~rp------ 261 (299)
T PRK09987 211 GLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAY-----------------------PTPARRP------ 261 (299)
T ss_pred CeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhc-----------------------CCCCCCC------
Confidence 599999999999999999998864 33321 111111100 1111111
Q ss_pred cccceecHHHHHHhcCCCCCCChHHHHHHHHHHH
Q 017760 224 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYW 257 (366)
Q Consensus 224 ~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~ 257 (366)
.+...|++|+++.+||+|. +++++|+++++.+
T Consensus 262 -~~~~ld~~k~~~~lg~~~~-~~~~~l~~~~~~~ 293 (299)
T PRK09987 262 -HNSRLNTEKFQQNFALVLP-DWQVGVKRMLTEL 293 (299)
T ss_pred -CcccCCHHHHHHHhCCCCc-cHHHHHHHHHHHH
Confidence 1226899999999999986 9999999999754
No 35
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.86 E-value=1.8e-20 Score=177.93 Aligned_cols=137 Identities=19% Similarity=0.140 Sum_probs=96.6
Q ss_pred CceEEEEeCCccccCCCCC---CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPGEER---HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 148 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~---~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 148 (366)
+++++++||+++|||+... .....+..+..|... . +++.++|+||+|+|++++.+++ .+..
T Consensus 181 ~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~i~v~Dva~a~~~~~~-----------~~~~- 244 (322)
T PLN02662 181 GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--F--PNASYRWVDVRDVANAHIQAFE-----------IPSA- 244 (322)
T ss_pred CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--C--CCCCcCeEEHHHHHHHHHHHhc-----------CcCc-
Confidence 6789999999999998642 334445555555432 2 2467899999999999999996 3222
Q ss_pred CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760 149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY 228 (366)
Q Consensus 149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~ 228 (366)
++.||++ ++++|+.|+++.+.+.++.. .+|... .+.. + .. ....
T Consensus 245 ~~~~~~~-g~~~s~~e~~~~i~~~~~~~----~~~~~~-----------------------~~~~---~-~~----~~~~ 288 (322)
T PLN02662 245 SGRYCLV-ERVVHYSEVVKILHELYPTL----QLPEKC-----------------------ADDK---P-YV----PTYQ 288 (322)
T ss_pred CCcEEEe-CCCCCHHHHHHHHHHHCCCC----CCCCCC-----------------------CCcc---c-cc----cccc
Confidence 3478887 57899999999999987632 111100 0000 0 00 1135
Q ss_pred ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760 229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 262 (366)
Q Consensus 229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~ 262 (366)
.|++|+++ |||+| .+++++++++++||++++.
T Consensus 289 ~d~~k~~~-lg~~~-~~~~~~l~~~~~~~~~~~~ 320 (322)
T PLN02662 289 VSKEKAKS-LGIEF-IPLEVSLKDTVESLKEKGF 320 (322)
T ss_pred cChHHHHH-hCCcc-ccHHHHHHHHHHHHHHcCC
Confidence 89999985 99997 5999999999999988764
No 36
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.86 E-value=8.9e-21 Score=179.12 Aligned_cols=143 Identities=15% Similarity=0.181 Sum_probs=103.8
Q ss_pred CCCceEEEEeCCccccCCCCC--C----HHHHHHHHHcCCCCeee-cCCCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760 70 RKCLYTCAVRPAAIYGPGEER--H----LPRIVSLAKLGLVPFKI-GEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 142 (366)
Q Consensus 70 ~~~l~~~ilRp~~iyGp~~~~--~----l~~~i~~~~~g~~~~~~-g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 142 (366)
..+++++++||+++|||++.. . ...+...+.+|..+.+. |+++..++|+||+|+|++++.+++.
T Consensus 157 ~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~--------- 227 (308)
T PRK11150 157 EANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN--------- 227 (308)
T ss_pred HcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc---------
Confidence 357889999999999998632 2 23444667777755455 5667889999999999999998862
Q ss_pred CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760 143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK 222 (366)
Q Consensus 143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~ 222 (366)
. .+++||+++++++|+.|+++.+.+.+|.. +....|. + +.... .
T Consensus 228 --~--~~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~--------------------------~-~~~~~----~ 271 (308)
T PRK11150 228 --G--VSGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPF--------------------------P-DKLKG----R 271 (308)
T ss_pred --C--CCCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccC--------------------------c-ccccc----c
Confidence 1 24699999999999999999999999843 1111110 0 00000 0
Q ss_pred hcccceecHHHHHHhcCCCCC-CChHHHHHHHHHHHH
Q 017760 223 VGVTHYFSLLKAKDELCYVPI-VSPREGMAATISYWQ 258 (366)
Q Consensus 223 ~~~~~~~d~~ka~~~LG~~p~-~~~~e~l~~~v~~~~ 258 (366)
.......|++|+++ +||+|+ .+++++|+++++|+.
T Consensus 272 ~~~~~~~d~~k~~~-~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 272 YQAFTQADLTKLRA-AGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred cceecccCHHHHHh-cCCCCCCCCHHHHHHHHHHHhh
Confidence 11122479999986 799987 599999999999974
No 37
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.86 E-value=2.5e-20 Score=176.71 Aligned_cols=146 Identities=17% Similarity=0.113 Sum_probs=105.3
Q ss_pred CCceEEEEeCCccccCCCC-----------CCHHHHHHHHH-cCCCCeee------cCCCcceeceeHHHHHHHHHHHHh
Q 017760 71 KCLYTCAVRPAAIYGPGEE-----------RHLPRIVSLAK-LGLVPFKI------GEPSVKTDWIYVDNLVLALILASM 132 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~-----------~~l~~~i~~~~-~g~~~~~~------g~~~~~~~~v~vdDla~a~~~a~~ 132 (366)
.+++++++||+.+|||... ..++.+..... ....+... +++++.++|+|++|+++++..+++
T Consensus 164 ~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~ 243 (328)
T TIGR01179 164 PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALE 243 (328)
T ss_pred cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHh
Confidence 6789999999999999642 12334444333 22222222 356788999999999999999986
Q ss_pred ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760 133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ 212 (366)
Q Consensus 133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~ 212 (366)
... ....+++||+++++++|+.|+++.+.+.+|.+.+....| .
T Consensus 244 ~~~---------~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~----------------------------~ 286 (328)
T TIGR01179 244 YLL---------NGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAP----------------------------R 286 (328)
T ss_pred hhh---------cCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCC----------------------------C
Confidence 311 124568999999999999999999999999765432211 0
Q ss_pred CCCcHHhhhhhcccceecHHHHHHhcCCCCCCC-hHHHHHHHHHHHHhc
Q 017760 213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVS-PREGMAATISYWQDR 260 (366)
Q Consensus 213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~-~~e~l~~~v~~~~~~ 260 (366)
.. .+ ......|++|++++|||+|.++ ++++++++++|++++
T Consensus 287 ~~---~~----~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 287 RP---GD----PASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred CC---cc----ccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence 00 00 0122469999999999999997 999999999999764
No 38
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.85 E-value=2.1e-20 Score=180.04 Aligned_cols=143 Identities=15% Similarity=0.075 Sum_probs=95.5
Q ss_pred CCceEEEEeCCccccCCCCCCHHHHHHHHH---cCCCC--eeecC---CCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEERHLPRIVSLAK---LGLVP--FKIGE---PSVKTDWIYVDNLVLALILASMGLLDDIPGQK 142 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~---~g~~~--~~~g~---~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 142 (366)
.+++++++||+++|||+....++.++..+. .|... ...+. ....++|+||+|+|++++.+++
T Consensus 194 ~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~---------- 263 (353)
T PLN02896 194 NGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLME---------- 263 (353)
T ss_pred cCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHh----------
Confidence 367799999999999987544444443332 34321 11111 1124699999999999999996
Q ss_pred CCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhh
Q 017760 143 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK 222 (366)
Q Consensus 143 ~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~ 222 (366)
.+. .++.|++ +++++++.|+++.+.+.++.....+.. ..+. .
T Consensus 264 -~~~-~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~----------------------------~~~~-------~ 305 (353)
T PLN02896 264 -QTK-AEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRL----------------------------DEEK-------R 305 (353)
T ss_pred -CCC-cCccEEe-cCCCCCHHHHHHHHHHhCCCCCccccc----------------------------cccc-------c
Confidence 222 2346864 567899999999999998732111110 0000 0
Q ss_pred hcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhccc
Q 017760 223 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 262 (366)
Q Consensus 223 ~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~ 262 (366)
.......|++|+++ +||+|+++++++|+++++|+++++-
T Consensus 306 ~~~~~~~~~~~~~~-lGw~p~~~l~~~i~~~~~~~~~~~~ 344 (353)
T PLN02896 306 GSIPSEISSKKLRD-LGFEYKYGIEEIIDQTIDCCVDHGF 344 (353)
T ss_pred CccccccCHHHHHH-cCCCccCCHHHHHHHHHHHHHHCCC
Confidence 01112458888875 9999999999999999999998765
No 39
>PLN02650 dihydroflavonol-4-reductase
Probab=99.85 E-value=3.4e-20 Score=178.47 Aligned_cols=141 Identities=14% Similarity=0.146 Sum_probs=93.9
Q ss_pred CceEEEEeCCccccCCCCCC-HHHHHHHH--HcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPGEERH-LPRIVSLA--KLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 148 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~~-l~~~i~~~--~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 148 (366)
+++++++||+++|||+.... .+.++..+ ..+... ..+. ...++|+||+|+|++++.+++ .+. .
T Consensus 182 gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~r~~v~V~Dva~a~~~~l~-----------~~~-~ 247 (351)
T PLN02650 182 GLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEA-HYSI-IKQGQFVHLDDLCNAHIFLFE-----------HPA-A 247 (351)
T ss_pred CCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcc-ccCc-CCCcceeeHHHHHHHHHHHhc-----------CcC-c
Confidence 67899999999999986432 22233322 223321 1222 234799999999999999996 222 2
Q ss_pred CccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760 149 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY 228 (366)
Q Consensus 149 g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~ 228 (366)
++.| +++++++|+.|+++.+.+.++.. .+|... ... +.+. ....
T Consensus 248 ~~~~-i~~~~~~s~~el~~~i~~~~~~~----~~~~~~------------------------~~~---~~~~----~~~~ 291 (351)
T PLN02650 248 EGRY-ICSSHDATIHDLAKMLREKYPEY----NIPARF------------------------PGI---DEDL----KSVE 291 (351)
T ss_pred CceE-EecCCCcCHHHHHHHHHHhCccc----CCCCCC------------------------CCc---Cccc----cccc
Confidence 3478 56667899999999999987621 111000 000 0011 1124
Q ss_pred ecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760 229 FSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 263 (366)
Q Consensus 229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~ 263 (366)
.|++|++ +|||+|+++++++|+++++|+++++.-
T Consensus 292 ~d~~k~~-~lG~~p~~~l~egl~~~i~~~~~~~~~ 325 (351)
T PLN02650 292 FSSKKLT-DLGFTFKYSLEDMFDGAIETCREKGLI 325 (351)
T ss_pred CChHHHH-HhCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 6888875 699999999999999999999876644
No 40
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.84 E-value=1.6e-20 Score=176.82 Aligned_cols=145 Identities=15% Similarity=0.235 Sum_probs=107.8
Q ss_pred CCceEEEEeCCccccCCCC------CCHHHHHHH----HHcCCCCee-ecCCCcceeceeHHHHHHHHHHHHhccccCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEE------RHLPRIVSL----AKLGLVPFK-IGEPSVKTDWIYVDNLVLALILASMGLLDDIP 139 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~------~~l~~~i~~----~~~g~~~~~-~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 139 (366)
.+++++++||+.+|||++. ..++.++.. ...+..... ++++++.++|+|++|+|+++..+++.
T Consensus 148 ~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~------ 221 (306)
T PLN02725 148 YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRR------ 221 (306)
T ss_pred hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhc------
Confidence 3678999999999999853 335555543 345555444 68888999999999999999999862
Q ss_pred CCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHh
Q 017760 140 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE 219 (366)
Q Consensus 140 ~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~e 219 (366)
. ..++.||+++++++|+.|+++.+++.+|.+.+.... +.+. .+
T Consensus 222 -----~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~----------------------------~~~~---~~ 264 (306)
T PLN02725 222 -----Y-SGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWD----------------------------TSKP---DG 264 (306)
T ss_pred -----c-ccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeec----------------------------CCCC---Cc
Confidence 2 234679999999999999999999999865432110 1100 00
Q ss_pred hhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760 220 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 263 (366)
Q Consensus 220 v~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~ 263 (366)
. ....+|++|++ ++||+|+++++++++++++|++++...
T Consensus 265 ~----~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~~~~~ 303 (306)
T PLN02725 265 T----PRKLMDSSKLR-SLGWDPKFSLKDGLQETYKWYLENYET 303 (306)
T ss_pred c----cccccCHHHHH-HhCCCCCCCHHHHHHHHHHHHHhhhhc
Confidence 0 12257999997 599999999999999999999887643
No 41
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.84 E-value=2e-20 Score=174.69 Aligned_cols=146 Identities=16% Similarity=0.104 Sum_probs=105.0
Q ss_pred CceEEEEeCCccccCCC-CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 017760 72 CLYTCAVRPAAIYGPGE-ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ 150 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~-~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~ 150 (366)
+++++++||+.+|||++ ..++..++..+.++..+...++ ..++++|++|+|+++..+++ .+...++
T Consensus 139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~-----------~~~~~~~ 205 (287)
T TIGR01214 139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQ-----------RLARARG 205 (287)
T ss_pred CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHh-----------hccCCCC
Confidence 67899999999999986 4556777877777766555554 56899999999999999996 3334578
Q ss_pred cEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceec
Q 017760 151 PYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFS 230 (366)
Q Consensus 151 ~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d 230 (366)
+||+++++++|+.|+++.+.+.+|.+......|..... . . . . .+.+... .....+|
T Consensus 206 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~--~---~---~--------~-~~~~~~~-------~~~~~~d 261 (287)
T TIGR01214 206 VYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPI--S---S---K--------E-YPRPARR-------PAYSVLD 261 (287)
T ss_pred eEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEee--c---H---H--------H-cCCCCCC-------CCccccc
Confidence 99999999999999999999999976543222110000 0 0 0 0 0111100 1123689
Q ss_pred HHHHHHhcCCCCCCChHHHHHHHHH
Q 017760 231 LLKAKDELCYVPIVSPREGMAATIS 255 (366)
Q Consensus 231 ~~ka~~~LG~~p~~~~~e~l~~~v~ 255 (366)
++|+++++||++ .++++++.++++
T Consensus 262 ~~~~~~~lg~~~-~~~~~~l~~~~~ 285 (287)
T TIGR01214 262 NTKLVKTLGTPL-PHWREALRAYLQ 285 (287)
T ss_pred hHHHHHHcCCCC-ccHHHHHHHHHh
Confidence 999999999955 599999998875
No 42
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.84 E-value=1.2e-19 Score=172.59 Aligned_cols=137 Identities=17% Similarity=0.126 Sum_probs=96.6
Q ss_pred CCceEEEEeCCccccCCCCC---CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 017760 71 KCLYTCAVRPAAIYGPGEER---HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA 147 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~~---~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~ 147 (366)
.+++++++||+++|||+... ....++..+..|... .+ ++.++|+||+|+|++++.+++ .+..
T Consensus 181 ~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~al~-----------~~~~ 245 (322)
T PLN02986 181 NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKALE-----------TPSA 245 (322)
T ss_pred hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHHhc-----------Cccc
Confidence 36789999999999997542 234555555566642 33 456899999999999999997 3333
Q ss_pred CCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccc
Q 017760 148 SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTH 227 (366)
Q Consensus 148 ~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~ 227 (366)
++.||++ ++++|+.|+++.+.+.++.. . +|. ..+ +.+.. ....
T Consensus 246 -~~~yni~-~~~~s~~e~~~~i~~~~~~~-~---~~~--------------------------~~~---~~~~~--~~~~ 288 (322)
T PLN02986 246 -NGRYIID-GPIMSVNDIIDILRELFPDL-C---IAD--------------------------TNE---ESEMN--EMIC 288 (322)
T ss_pred -CCcEEEe-cCCCCHHHHHHHHHHHCCCC-C---CCC--------------------------CCc---ccccc--ccCC
Confidence 3489995 56799999999999998621 1 110 000 01110 0111
Q ss_pred eecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 228 YFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 228 ~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
..|++|+++ |||+|+ +++|+++++++|+++.+
T Consensus 289 ~~d~~~~~~-lg~~~~-~l~e~~~~~~~~~~~~~ 320 (322)
T PLN02986 289 KVCVEKVKN-LGVEFT-PMKSSLRDTILSLKEKC 320 (322)
T ss_pred ccCHHHHHH-cCCccc-CHHHHHHHHHHHHHHcC
Confidence 378899865 999997 99999999999998754
No 43
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.84 E-value=1.2e-19 Score=188.51 Aligned_cols=175 Identities=15% Similarity=0.050 Sum_probs=124.5
Q ss_pred CCCceEEEEeCCccccCCCCCC---------HHHHHHHHHc-CCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCC
Q 017760 70 RKCLYTCAVRPAAIYGPGEERH---------LPRIVSLAKL-GLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 139 (366)
Q Consensus 70 ~~~l~~~ilRp~~iyGp~~~~~---------l~~~i~~~~~-g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 139 (366)
..+++++++||+.|||++.... +..++..+.. .......+++....+++|+||+++++..+++
T Consensus 165 ~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~------- 237 (657)
T PRK07201 165 ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMH------- 237 (657)
T ss_pred cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhc-------
Confidence 3578999999999999865321 1122222211 1222344566677899999999999999886
Q ss_pred CCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCC---CccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCc
Q 017760 140 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDL---PKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 216 (366)
Q Consensus 140 ~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~---~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~ 216 (366)
.+...|++||+++++++|+.|+++.+.+.+|.+. +...+|.++...++.+.+....+...+ .....+.
T Consensus 238 ----~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 308 (657)
T PRK07201 238 ----KDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAV-----ATQLGIP 308 (657)
T ss_pred ----CcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHH-----HHhcCCC
Confidence 3455688999999999999999999999999887 667789888777666322222111100 0234455
Q ss_pred HHhhhhhcccceecHHHHHHhc---CCCCCCChHHHHHHHHHHHHhcc
Q 017760 217 PAEVYKVGVTHYFSLLKAKDEL---CYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 217 ~~ev~~~~~~~~~d~~ka~~~L---G~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
+..+...+.+..||++|++++| |++.. ++++.+.+.++||.++-
T Consensus 309 ~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~~ 355 (657)
T PRK07201 309 PEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERHL 355 (657)
T ss_pred HHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhcC
Confidence 6677777777799999999998 55543 67899999999886653
No 44
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.83 E-value=1e-19 Score=168.59 Aligned_cols=200 Identities=21% Similarity=0.208 Sum_probs=141.0
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc----ccccc--CCCeEEEEcc------------------
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW----SHLLI--NHGVHCIQGL------------------ 65 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~----~~~~~--~~~v~~i~gD------------------ 65 (366)
.+++|+|||||||||+++++.|+++| |.|+++.|++..+. ..++. .+....+.+|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rG-Y~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRG-YTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCC-CEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence 56899999999999999999999999 59999999886532 12222 3457788888
Q ss_pred --------------------------------------------------------------------------------
Q 017760 66 -------------------------------------------------------------------------------- 65 (366)
Q Consensus 66 -------------------------------------------------------------------------------- 65 (366)
T Consensus 84 H~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~ 163 (327)
T KOG1502|consen 84 HTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLW 163 (327)
T ss_pred EeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHH
Confidence
Q ss_pred -------------ccCCCCCceEEEEeCCccccCCCCCCH---HHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHH
Q 017760 66 -------------RKNNRKCLYTCAVRPAAIYGPGEERHL---PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 129 (366)
Q Consensus 66 -------------ks~~~~~l~~~ilRp~~iyGp~~~~~l---~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 129 (366)
+...+++++.+.+.|+.|+||.....+ ........+|..-. + .+....||||+|+|.||+.
T Consensus 164 Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~-~--~n~~~~~VdVrDVA~AHv~ 240 (327)
T KOG1502|consen 164 YALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAET-Y--PNFWLAFVDVRDVALAHVL 240 (327)
T ss_pred HHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhccccc-C--CCCceeeEeHHHHHHHHHH
Confidence 115566999999999999999876532 33444455664322 2 2344559999999999999
Q ss_pred HHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhcccccc
Q 017760 130 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWW 209 (366)
Q Consensus 130 a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~ 209 (366)
|+| .+.+. +.|.+.+.. .++.|+++.+.+.+.... +|..
T Consensus 241 a~E-----------~~~a~-GRyic~~~~-~~~~ei~~~l~~~~P~~~----ip~~------------------------ 279 (327)
T KOG1502|consen 241 ALE-----------KPSAK-GRYICVGEV-VSIKEIADILRELFPDYP----IPKK------------------------ 279 (327)
T ss_pred HHc-----------CcccC-ceEEEecCc-ccHHHHHHHHHHhCCCCC----CCCC------------------------
Confidence 998 45555 467666554 669999999988885322 2211
Q ss_pred CCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 210 LPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 210 ~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
.- .+.......+.+|++|+++..|++.. +++|++.++++++++.+
T Consensus 280 ----~~--~~~~~~~~~~~~~~~k~k~lg~~~~~-~l~e~~~dt~~sl~~~~ 324 (327)
T KOG1502|consen 280 ----NA--EEHEGFLTSFKVSSEKLKSLGGFKFR-PLEETLSDTVESLREKG 324 (327)
T ss_pred ----CC--ccccccccccccccHHHHhcccceec-ChHHHHHHHHHHHHHhc
Confidence 00 01011111224799999985557775 99999999999998765
No 45
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.83 E-value=1.7e-19 Score=161.37 Aligned_cols=200 Identities=22% Similarity=0.231 Sum_probs=144.3
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccC----CCe-EEE--Ecc---------------------
Q 017760 14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLIN----HGV-HCI--QGL--------------------- 65 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~----~~v-~~i--~gD--------------------- 65 (366)
|+|||||||||++|+..|.+.| |+|+.+.|+++......-.. +.+ +.. ..|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~g-h~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K~ 79 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGG-HQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAERRWTEKQKE 79 (297)
T ss_pred CeEeccccchhHHHHHHHHhCC-CeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCccccccCCHHHHH
Confidence 6899999999999999999999 89999999986543211100 000 000 133
Q ss_pred ------------------------------------------------------------------ccCCCCCceEEEEe
Q 017760 66 ------------------------------------------------------------------RKNNRKCLYTCAVR 79 (366)
Q Consensus 66 ------------------------------------------------------------------ks~~~~~l~~~ilR 79 (366)
...+..+.++|.+|
T Consensus 80 ~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllR 159 (297)
T COG1090 80 EIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLR 159 (297)
T ss_pred HHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEE
Confidence 11445688999999
Q ss_pred CCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCC
Q 017760 80 PAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFP 159 (366)
Q Consensus 80 p~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~ 159 (366)
.+.|.|+.. +.++++....+.|.- -.+|+|++.++|||+||+++++..+++ ++..+| +||.+.+.|
T Consensus 160 tGvVLs~~G-GaL~~m~~~fk~glG-G~~GsGrQ~~SWIhieD~v~~I~fll~-----------~~~lsG-p~N~taP~P 225 (297)
T COG1090 160 TGVVLSPDG-GALGKMLPLFKLGLG-GKLGSGRQWFSWIHIEDLVNAILFLLE-----------NEQLSG-PFNLTAPNP 225 (297)
T ss_pred EEEEecCCC-cchhhhcchhhhccC-CccCCCCceeeeeeHHHHHHHHHHHHh-----------CcCCCC-cccccCCCc
Confidence 999999854 467777766666553 348999999999999999999999997 556665 899999999
Q ss_pred CCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcC
Q 017760 160 INTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELC 239 (366)
Q Consensus 160 vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG 239 (366)
|+..||.+.+.+.++++.. ..+|....+++. .|+...++. .+ ..=..|+.+ .|
T Consensus 226 V~~~~F~~al~r~l~RP~~-~~vP~~~~rl~L--Ge~a~~lL~---------gQ--------------rvlP~kl~~-aG 278 (297)
T COG1090 226 VRNKEFAHALGRALHRPAI-LPVPSFALRLLL--GEMADLLLG---------GQ--------------RVLPKKLEA-AG 278 (297)
T ss_pred CcHHHHHHHHHHHhCCCcc-ccCcHHHHHHHh--hhhHHHHhc---------cc--------------hhhHHHHHH-CC
Confidence 9999999999999997643 567777665543 244433332 11 122344443 78
Q ss_pred CCCCC-ChHHHHHHHHH
Q 017760 240 YVPIV-SPREGMAATIS 255 (366)
Q Consensus 240 ~~p~~-~~~e~l~~~v~ 255 (366)
|+-++ +++++|.+.+.
T Consensus 279 F~F~y~dl~~AL~~il~ 295 (297)
T COG1090 279 FQFQYPDLEEALADILK 295 (297)
T ss_pred CeeecCCHHHHHHHHHh
Confidence 88776 67888777653
No 46
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.82 E-value=2.1e-19 Score=171.21 Aligned_cols=191 Identities=15% Similarity=0.184 Sum_probs=138.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCccc--ccccCCCeEEEEcc--------------------
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSPWS--HLLINHGVHCIQGL-------------------- 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD-------------------- 65 (366)
+++++|+||||+||+|+++++.|+++| .++|++++++...... ......+++++++|
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 456899999999999999999999986 2489999886543110 11112356777777
Q ss_pred -----------------------------------------------------------------c----cCCCCCceEE
Q 017760 66 -----------------------------------------------------------------R----KNNRKCLYTC 76 (366)
Q Consensus 66 -----------------------------------------------------------------k----s~~~~~l~~~ 76 (366)
+ .....+++++
T Consensus 82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~ 161 (324)
T TIGR03589 82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANPINLYGATKLASDKLFVAANNISGSKGTRFS 161 (324)
T ss_pred cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHhhccccCcEEE
Confidence 0 1235689999
Q ss_pred EEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecC
Q 017760 77 AVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSD 156 (366)
Q Consensus 77 ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~ 156 (366)
++||+++|||+. ..++.+...+..|......+++++.++|+|++|+|++++.++++ ...+++| ++.
T Consensus 162 ~lR~g~v~G~~~-~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~------------~~~~~~~-~~~ 227 (324)
T TIGR03589 162 VVRYGNVVGSRG-SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER------------MLGGEIF-VPK 227 (324)
T ss_pred EEeecceeCCCC-CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh------------CCCCCEE-ccC
Confidence 999999999975 47788888777776334456778889999999999999999972 2245677 566
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHH
Q 017760 157 GFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKD 236 (366)
Q Consensus 157 ~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~ 236 (366)
++.+++.|+++.+.+..+.... + .++.-.+.+ ...|.+|+++
T Consensus 228 ~~~~sv~el~~~i~~~~~~~~~----~---------------------------~~~g~~~~~-------~~~~~~~~~~ 269 (324)
T TIGR03589 228 IPSMKITDLAEAMAPECPHKIV----G---------------------------IRPGEKLHE-------VMITEDDARH 269 (324)
T ss_pred CCcEEHHHHHHHHHhhCCeeEe----C---------------------------CCCCchhHh-------hhcChhhhhh
Confidence 6779999999999986532210 0 111100111 1369999999
Q ss_pred hcCCCCCCChHHHHH
Q 017760 237 ELCYVPIVSPREGMA 251 (366)
Q Consensus 237 ~LG~~p~~~~~e~l~ 251 (366)
+|||+|++++++++.
T Consensus 270 ~lg~~~~~~l~~~~~ 284 (324)
T TIGR03589 270 TYELGDYYAILPSIS 284 (324)
T ss_pred hcCCCCeEEEccccc
Confidence 999999999988875
No 47
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.81 E-value=6.2e-19 Score=164.67 Aligned_cols=139 Identities=16% Similarity=0.095 Sum_probs=99.9
Q ss_pred CCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 017760 71 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ 150 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~ 150 (366)
.+++++++||+.+|||++. ..+.+......... ..+|++++.++++|++|+|+++..+++ .+. .++
T Consensus 153 ~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~-----------~~~-~~g 218 (292)
T TIGR01777 153 LGTRVVLLRTGIVLGPKGG-ALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALE-----------NAS-ISG 218 (292)
T ss_pred cCCceEEEeeeeEECCCcc-hhHHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhc-----------Ccc-cCC
Confidence 4688999999999999753 44555444333222 235788899999999999999999996 322 345
Q ss_pred cEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceec
Q 017760 151 PYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFS 230 (366)
Q Consensus 151 ~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d 230 (366)
+||+++++++|+.|+++.+.+.+|.+.+ ..+|.+...... + ..+ .....+...+
T Consensus 219 ~~~~~~~~~~s~~di~~~i~~~~g~~~~-~~~p~~~~~~~~----------~--------~~~-------~~~~~~~~~~ 272 (292)
T TIGR01777 219 PVNATAPEPVRNKEFAKALARALHRPAF-FPVPAFVLRALL----------G--------EMA-------DLLLKGQRVL 272 (292)
T ss_pred ceEecCCCccCHHHHHHHHHHHhCCCCc-CcCCHHHHHHHh----------c--------hhh-------HHHhCCcccc
Confidence 8999999999999999999999997643 558877654321 0 000 0122234578
Q ss_pred HHHHHHhcCCCCCC-ChHHHH
Q 017760 231 LLKAKDELCYVPIV-SPREGM 250 (366)
Q Consensus 231 ~~ka~~~LG~~p~~-~~~e~l 250 (366)
++|+++ +||+|++ +++|++
T Consensus 273 ~~~~~~-~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 273 PEKLLE-AGFQFQYPDLDEAL 292 (292)
T ss_pred cHHHHh-cCCeeeCcChhhcC
Confidence 899875 9999998 577753
No 48
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.81 E-value=1.7e-18 Score=154.92 Aligned_cols=223 Identities=24% Similarity=0.224 Sum_probs=163.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc--------cccCCCeEEEEcc-----------------
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH--------LLINHGVHCIQGL----------------- 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~--------~~~~~~v~~i~gD----------------- 65 (366)
+++.||||-||+-|++|++.|+++|+ +|+++.|+.+..+.. ....+.++++.||
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY-~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGY-EVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCc-EEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 47789999999999999999999995 999999986544332 1223458899999
Q ss_pred --------------------------------------------------------------------------------
Q 017760 66 -------------------------------------------------------------------------------- 65 (366)
Q Consensus 66 -------------------------------------------------------------------------------- 65 (366)
T Consensus 81 EIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKl 160 (345)
T COG1089 81 EIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL 160 (345)
T ss_pred hheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHH
Confidence
Q ss_pred -------ccCCCCCceEEEEeCCccccCCCC-----CCHHHHHHHHHcCCC-CeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760 66 -------RKNNRKCLYTCAVRPAAIYGPGEE-----RHLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASM 132 (366)
Q Consensus 66 -------ks~~~~~l~~~ilRp~~iyGp~~~-----~~l~~~i~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~ 132 (366)
...+.+++.+|.=+..+--+|... +.+.+.+..++.|.. ....|+-++++||-|+.|.|+++.++++
T Consensus 161 Ya~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQ 240 (345)
T COG1089 161 YAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQ 240 (345)
T ss_pred HHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHc
Confidence 125667888888777777777542 335566667777753 4567999999999999999999999997
Q ss_pred ccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCC
Q 017760 133 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ 212 (366)
Q Consensus 133 ~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~ 212 (366)
+ ..++.|.|+.|+..|++||++...+..|.+....---....- ...-.+..+ --+.+
T Consensus 241 q-------------~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g--------~da~~G~~~--V~idp 297 (345)
T COG1089 241 Q-------------EEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKG--------VDAKTGKII--VEIDP 297 (345)
T ss_pred c-------------CCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccc--------cccccCcee--EEECc
Confidence 3 236789999999999999999999999966432100000000 000000000 00256
Q ss_pred CCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcc
Q 017760 213 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 261 (366)
Q Consensus 213 p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~ 261 (366)
..++|.|+..+ .-|.+||+++|||+|.++++|-+++++++..+..
T Consensus 298 ~~fRPaEV~~L----lgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~~ 342 (345)
T COG1089 298 RYFRPAEVDLL----LGDPTKAKEKLGWRPEVSLEELVREMVEADLEAA 342 (345)
T ss_pred cccCchhhhhh----cCCHHHHHHHcCCccccCHHHHHHHHHHHHHHHh
Confidence 67789998766 5699999999999999999999999999876643
No 49
>PLN02686 cinnamoyl-CoA reductase
Probab=99.78 E-value=1.6e-18 Score=167.94 Aligned_cols=127 Identities=13% Similarity=-0.004 Sum_probs=87.3
Q ss_pred CceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCcc
Q 017760 72 CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQP 151 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~ 151 (366)
+++++++||++||||++....+..+..+.+|. ..++|++. ++|+||+|+|+|+++++++. .+...++.
T Consensus 235 gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~-~~~~g~g~--~~~v~V~Dva~A~~~al~~~---------~~~~~~~~ 302 (367)
T PLN02686 235 GLKLATICPALVTGPGFFRRNSTATIAYLKGA-QEMLADGL--LATADVERLAEAHVCVYEAM---------GNKTAFGR 302 (367)
T ss_pred CceEEEEcCCceECCCCCCCCChhHHHHhcCC-CccCCCCC--cCeEEHHHHHHHHHHHHhcc---------CCCCCCCc
Confidence 67899999999999986432222222344554 34566654 57999999999999999731 01234667
Q ss_pred EEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecH
Q 017760 152 YFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSL 231 (366)
Q Consensus 152 y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~ 231 (366)
| +++++++++.|+++.+.+.+|.+.+....| .-.+.+. .....|+
T Consensus 303 y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~------------------------------~~~~~d~----~~~~~d~ 347 (367)
T PLN02686 303 Y-ICFDHVVSREDEAEELARQIGLPINKIAGN------------------------------SSSDDTP----ARFELSN 347 (367)
T ss_pred E-EEeCCCccHHHHHHHHHHHcCCCCCcCCCc------------------------------hhhcCCc----ccccccH
Confidence 8 888899999999999999999764432211 0001111 1225699
Q ss_pred HHHHHhcCCCCCCC
Q 017760 232 LKAKDELCYVPIVS 245 (366)
Q Consensus 232 ~ka~~~LG~~p~~~ 245 (366)
+|++++|||+|+-.
T Consensus 348 ~kl~~~l~~~~~~~ 361 (367)
T PLN02686 348 KKLSRLMSRTRRCC 361 (367)
T ss_pred HHHHHHHHHhhhcc
Confidence 99999999999743
No 50
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.77 E-value=2.5e-17 Score=160.68 Aligned_cols=176 Identities=19% Similarity=0.148 Sum_probs=134.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc----cc--ccCCCeEEEEcc-----------------
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS----HL--LINHGVHCIQGL----------------- 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~----~~--~~~~~v~~i~gD----------------- 65 (366)
.++++|+|||||||+|+++++.|+++| ++|++++|+...... .. ...++++++++|
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRG-YNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 456899999999999999999999999 599999987632110 00 001123333333
Q ss_pred -----------------------------------------------------------cc-------CCCCCceEEEEe
Q 017760 66 -----------------------------------------------------------RK-------NNRKCLYTCAVR 79 (366)
Q Consensus 66 -----------------------------------------------------------ks-------~~~~~l~~~ilR 79 (366)
|. ....+++++++|
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~~~~~~sK~~~E~~l~~~~~gl~~tIlR 216 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPLLEFQRAKLKFEAELQALDSDFTYSIVR 216 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcchHHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 00 124789999999
Q ss_pred CCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcce-eceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCC-
Q 017760 80 PAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKT-DWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG- 157 (366)
Q Consensus 80 p~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~-~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~- 157 (366)
|+.+||+. ...+..+.+|....++|+++..+ ++||++|+|+++..+++ .+...+++|||+++
T Consensus 217 p~~~~~~~-----~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~-----------~~~~~~~~~~Iggp~ 280 (390)
T PLN02657 217 PTAFFKSL-----GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVL-----------DESKINKVLPIGGPG 280 (390)
T ss_pred cHHHhccc-----HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHh-----------CccccCCEEEcCCCC
Confidence 99999852 33556677788777789887654 68999999999999986 44456789999985
Q ss_pred CCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhh
Q 017760 158 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVL 201 (366)
Q Consensus 158 ~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~ 201 (366)
+.+|+.|+++.+.+.+|.+.+...+|.+....++++.+.+..++
T Consensus 281 ~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~~~~~~~~~~~~~~ 324 (390)
T PLN02657 281 KALTPLEQGEMLFRILGKEPKFFKVPIQIMDFAIGVLDFLAKIF 324 (390)
T ss_pred cccCHHHHHHHHHHHhCCCCceEEcCHHHHHHHHHHHHHhhhhC
Confidence 68999999999999999988888999999988888887776655
No 51
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.77 E-value=4.1e-18 Score=155.73 Aligned_cols=207 Identities=25% Similarity=0.282 Sum_probs=151.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc-----cccccC--CCeEEEEcc------------------
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW-----SHLLIN--HGVHCIQGL------------------ 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-----~~~~~~--~~v~~i~gD------------------ 65 (366)
.++||||||+||+|+|.+.+|+++|+ .|.++|.-..... ..++.. ..+.++++|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy-~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~ 80 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGY-GVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA 80 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCC-cEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence 46899999999999999999999995 9999987543221 122223 789999999
Q ss_pred ----------------------------------------------------------------------------cc--
Q 017760 66 ----------------------------------------------------------------------------RK-- 67 (366)
Q Consensus 66 ----------------------------------------------------------------------------ks-- 67 (366)
|.
T Consensus 81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~i 160 (343)
T KOG1371|consen 81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAI 160 (343)
T ss_pred EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHH
Confidence 00
Q ss_pred -------CCCCCceEEEEeCCcccc--CC----CC------CCHHHHHHHH--------HcCCCCeeecCCCcceeceeH
Q 017760 68 -------NNRKCLYTCAVRPAAIYG--PG----EE------RHLPRIVSLA--------KLGLVPFKIGEPSVKTDWIYV 120 (366)
Q Consensus 68 -------~~~~~l~~~ilRp~~iyG--p~----~~------~~l~~~i~~~--------~~g~~~~~~g~~~~~~~~v~v 120 (366)
.....+..+.||..+++| |. +. +.+|...+.+ ..|.. +...||+..++++|+
T Consensus 161 E~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d-~~t~dgt~vrdyi~v 239 (343)
T KOG1371|consen 161 EEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRD-YTTIDGTIVRDYIHV 239 (343)
T ss_pred HHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCc-ccccCCCeeecceee
Confidence 333458899999999999 32 21 2233222211 12222 233466899999999
Q ss_pred HHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHh
Q 017760 121 DNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSV 200 (366)
Q Consensus 121 dDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~ 200 (366)
-|+|++++.|+.++... ..-++||++.+...++.|+...+++.+|.+.+...+|
T Consensus 240 ~Dla~~h~~al~k~~~~---------~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~----------------- 293 (343)
T KOG1371|consen 240 LDLADGHVAALGKLRGA---------AEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVP----------------- 293 (343)
T ss_pred EehHHHHHHHhhccccc---------hheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccC-----------------
Confidence 99999999999864331 2334999999999999999999999999887654321
Q ss_pred hhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760 201 LYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 263 (366)
Q Consensus 201 ~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~ 263 (366)
. ++.++. ..+.+.+++++||||+|.++++|++++...|..++..+
T Consensus 294 -------------~-R~gdv~----~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~np~g 338 (343)
T KOG1371|consen 294 -------------R-RNGDVA----FVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQNPSG 338 (343)
T ss_pred -------------C-CCCCce----eeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcCCCc
Confidence 1 222221 22678999999999999999999999999999887654
No 52
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.77 E-value=2.9e-19 Score=167.18 Aligned_cols=204 Identities=21% Similarity=0.202 Sum_probs=133.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccc------cCCCeEEEEc-----c--------------
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLL------INHGVHCIQG-----L-------------- 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~------~~~~v~~i~g-----D-------------- 65 (366)
||||||||+|++|++|.+.|.++| ++|+++++..-.-.. ..+ ..+++-+..+ |
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~-~~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~ 79 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERG-YEVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINV 79 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTS-EEEEEESTTCS-TTSHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHhhCC-CEEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhh
Confidence 689999999999999999999999 589999766321111 000 0133333332 1
Q ss_pred -------------------------------------------------cc-----CCCCCceEEEEeCCccccCCCCCC
Q 017760 66 -------------------------------------------------RK-----NNRKCLYTCAVRPAAIYGPGEERH 91 (366)
Q Consensus 66 -------------------------------------------------ks-----~~~~~l~~~ilRp~~iyGp~~~~~ 91 (366)
|. ..+...+++|+|++.+||+...++
T Consensus 80 ~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~ 159 (286)
T PF04321_consen 80 DATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNALILRTSWVYGPSGRNF 159 (286)
T ss_dssp HHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSH
T ss_pred HHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEecceecccCCCch
Confidence 00 111233799999999999977788
Q ss_pred HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHH
Q 017760 92 LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLK 171 (366)
Q Consensus 92 l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~ 171 (366)
+..+++.+.+++.+..+.| ..++++|++|+|+++..++++-..+ ....++||+++++.+|.+||++.+++
T Consensus 160 ~~~~~~~~~~~~~i~~~~d--~~~~p~~~~dlA~~i~~l~~~~~~~--------~~~~Giyh~~~~~~~S~~e~~~~i~~ 229 (286)
T PF04321_consen 160 LRWLLRRLRQGEPIKLFDD--QYRSPTYVDDLARVILELIEKNLSG--------ASPWGIYHLSGPERVSRYEFAEAIAK 229 (286)
T ss_dssp HHHHHHHHHCTSEEEEESS--CEE--EEHHHHHHHHHHHHHHHHH---------GGG-EEEE---BS-EEHHHHHHHHHH
T ss_pred hhhHHHHHhcCCeeEeeCC--ceeCCEEHHHHHHHHHHHHHhcccc--------cccceeEEEecCcccCHHHHHHHHHH
Confidence 8999999999998776654 6789999999999999999852221 12357999999999999999999999
Q ss_pred hcCCCCCcc-ccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHH
Q 017760 172 TLDYDLPKS-WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGM 250 (366)
Q Consensus 172 ~lg~~~~~~-~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l 250 (366)
.+|.+.+.+ .++ ....... .....+..+|++|+++.+|.+|. +++++|
T Consensus 230 ~~~~~~~~i~~~~----------------------------~~~~~~~--~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l 278 (286)
T PF04321_consen 230 ILGLDPELIKPVS----------------------------SSEFPRA--APRPRNTSLDCRKLKNLLGIKPP-PWREGL 278 (286)
T ss_dssp HHTHCTTEEEEES----------------------------STTSTTS--SGS-SBE-B--HHHHHCTTS----BHHHHH
T ss_pred HhCCCCceEEecc----------------------------cccCCCC--CCCCCcccccHHHHHHccCCCCc-CHHHHH
Confidence 999886332 111 1111111 11122446899999999999996 899999
Q ss_pred HHHHHHH
Q 017760 251 AATISYW 257 (366)
Q Consensus 251 ~~~v~~~ 257 (366)
+++++.|
T Consensus 279 ~~~~~~~ 285 (286)
T PF04321_consen 279 EELVKQY 285 (286)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999765
No 53
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=1.2e-17 Score=144.57 Aligned_cols=148 Identities=17% Similarity=0.212 Sum_probs=112.6
Q ss_pred CCCCCceEEEEeCCccccCCCC------CCHHHHHHHH----HcCC-CCeeecCCCcceeceeHHHHHHHHHHHHhcccc
Q 017760 68 NNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLA----KLGL-VPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 136 (366)
Q Consensus 68 ~~~~~l~~~ilRp~~iyGp~~~------~~l~~~i~~~----~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 136 (366)
..+++..++..-|+++|||.+. +.+|.++..+ .+|- .+.++|.|...++|+|++|+|++.+..++.
T Consensus 151 ~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~--- 227 (315)
T KOG1431|consen 151 RQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLRE--- 227 (315)
T ss_pred HHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHh---
Confidence 4567888999999999999874 4566665543 4554 567889999999999999999999999962
Q ss_pred CCCCCCCCCCCCCccEEecCCC--CCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCC
Q 017760 137 DIPGQKGRPIASGQPYFVSDGF--PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 214 (366)
Q Consensus 137 ~~~~~~~~~~~~g~~y~I~~~~--~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~ 214 (366)
-..-+..+++.|+ .+|.+|.++.+.+..+++.+...- -..+
T Consensus 228 ---------Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~D----------------------------ttK~ 270 (315)
T KOG1431|consen 228 ---------YEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWD----------------------------TTKS 270 (315)
T ss_pred ---------hcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEee----------------------------ccCC
Confidence 2234678888887 799999999999999988653210 0000
Q ss_pred CcHHhhhhhcccceecHHHHHHhcCCCCCCC-hHHHHHHHHHHHHhcccc
Q 017760 215 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVS-PREGMAATISYWQDRKRK 263 (366)
Q Consensus 215 l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~-~~e~l~~~v~~~~~~~~~ 263 (366)
- .+.+ ...|++|++. |+|.|+.+ +++++.++++||.++-..
T Consensus 271 D--Gq~k-----KtasnsKL~s-l~pd~~ft~l~~ai~~t~~Wy~~Ny~q 312 (315)
T KOG1431|consen 271 D--GQFK-----KTASNSKLRS-LLPDFKFTPLEQAISETVQWYLDNYEQ 312 (315)
T ss_pred C--CCcc-----cccchHHHHH-hCCCcccChHHHHHHHHHHHHHHhHHh
Confidence 0 0111 1479999988 99999986 999999999999886543
No 54
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.72 E-value=2e-17 Score=149.60 Aligned_cols=129 Identities=30% Similarity=0.428 Sum_probs=105.0
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc----------------------------
Q 017760 14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL---------------------------- 65 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD---------------------------- 65 (366)
|+||||+||+|++++++|+++| ++|+.+.+++........ ..+++++.+|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~-~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~ 78 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG-HEVIVLSRSSNSESFEEK-KLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSN 78 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-TEEEEEESCSTGGHHHHH-HTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSH
T ss_pred EEEEccCCHHHHHHHHHHHHcC-Cccccccccccccccccc-cceEEEEEeeccccccccccccccCceEEEEeeccccc
Confidence 7999999999999999999999 589988888765432111 1156666666
Q ss_pred --------------------------------------------------------------------------ccCCCC
Q 017760 66 --------------------------------------------------------------------------RKNNRK 71 (366)
Q Consensus 66 --------------------------------------------------------------------------ks~~~~ 71 (366)
...+..
T Consensus 79 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~ 158 (236)
T PF01370_consen 79 PESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY 158 (236)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 002234
Q ss_pred CceEEEEeCCccccCC-----CCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPG-----EERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI 146 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~-----~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~ 146 (366)
+++++++||+.+|||+ ..+.++.++..+.+|+.+.+++++++.++++|++|+|++++.++++ +.
T Consensus 159 ~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-----------~~ 227 (236)
T PF01370_consen 159 GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALEN-----------PK 227 (236)
T ss_dssp TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHH-----------SC
T ss_pred ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhC-----------CC
Confidence 8899999999999999 2467889999999999888899999999999999999999999983 34
Q ss_pred CCCccEEec
Q 017760 147 ASGQPYFVS 155 (366)
Q Consensus 147 ~~g~~y~I~ 155 (366)
..+++|||+
T Consensus 228 ~~~~~yNig 236 (236)
T PF01370_consen 228 AAGGIYNIG 236 (236)
T ss_dssp TTTEEEEES
T ss_pred CCCCEEEeC
Confidence 678999985
No 55
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.68 E-value=5e-16 Score=145.13 Aligned_cols=159 Identities=14% Similarity=0.072 Sum_probs=111.7
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc-------cccC--------------CC-eEEEE---cc--
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH-------LLIN--------------HG-VHCIQ---GL-- 65 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~-------~~~~--------------~~-v~~i~---gD-- 65 (366)
+|+||||||++|++++++|+++| ++|++++|++...... +... .+ ++.+. ++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~ 79 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAAS-VPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP 79 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCC-CcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC
Confidence 58999999999999999999999 5999999986432100 0000 12 22221 11
Q ss_pred -----------------------cc-----------------CCC-CCceEEEEeCCccccCCCCCCHHHHHHHHHcCCC
Q 017760 66 -----------------------RK-----------------NNR-KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLV 104 (366)
Q Consensus 66 -----------------------ks-----------------~~~-~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~ 104 (366)
-| .+. .++++|++||+.+|+...... ....+..+..
T Consensus 80 ~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~~~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~---~~~~~~~~~~ 156 (285)
T TIGR03649 80 DLAPPMIKFIDFARSKGVRRFVLLSASIIEKGGPAMGQVHAHLDSLGGVEYTVLRPTWFMENFSEEF---HVEAIRKENK 156 (285)
T ss_pred ChhHHHHHHHHHHHHcCCCEEEEeeccccCCCCchHHHHHHHHHhccCCCEEEEeccHHhhhhcccc---cccccccCCe
Confidence 00 112 489999999999886532111 1122222222
Q ss_pred CeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCH
Q 017760 105 PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAV 184 (366)
Q Consensus 105 ~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~ 184 (366)
...+.++...+|+|++|+++++..+++ .+...++.|++++++.+|+.|+++.+.+.+|++.+...+|.
T Consensus 157 -~~~~~g~~~~~~v~~~Dva~~~~~~l~-----------~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~ 224 (285)
T TIGR03649 157 -IYSATGDGKIPFVSADDIARVAYRALT-----------DKVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLTE 224 (285)
T ss_pred -EEecCCCCccCcccHHHHHHHHHHHhc-----------CCCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCCH
Confidence 334567788999999999999999986 44455789999999999999999999999999888777777
Q ss_pred HHH
Q 017760 185 PHA 187 (366)
Q Consensus 185 ~~~ 187 (366)
...
T Consensus 225 ~~~ 227 (285)
T TIGR03649 225 EEL 227 (285)
T ss_pred HHH
Confidence 543
No 56
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.68 E-value=4.6e-16 Score=142.27 Aligned_cols=142 Identities=17% Similarity=0.150 Sum_probs=108.9
Q ss_pred CCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760 70 RKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG 149 (366)
Q Consensus 70 ~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g 149 (366)
..+.++.|+|.+++||....+++..+++..+.|+.+.++.| +..+++++.|+|+++..+++. ...+
T Consensus 137 ~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~D--q~gsPt~~~dlA~~i~~ll~~------------~~~~ 202 (281)
T COG1091 137 AAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDD--QYGSPTYTEDLADAILELLEK------------EKEG 202 (281)
T ss_pred HhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECC--eeeCCccHHHHHHHHHHHHhc------------cccC
Confidence 34577999999999999888888899999999998877755 889999999999999998863 3344
Q ss_pred ccEEecCCCCCCHHHHHHHHHHhcCCCCCccc-cCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccce
Q 017760 150 QPYFVSDGFPINTFEFIGPLLKTLDYDLPKSW-LAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY 228 (366)
Q Consensus 150 ~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~-lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~ 228 (366)
.+||+++...+|++||++.+.+.++.+..... .+... .+.+.-+|. +..
T Consensus 203 ~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~-----------------------~~~~a~RP~-------~S~ 252 (281)
T COG1091 203 GVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAE-----------------------YPTPAKRPA-------NSS 252 (281)
T ss_pred cEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccc-----------------------cCccCCCCc-------ccc
Confidence 49999999989999999999999997653221 11000 011111111 124
Q ss_pred ecHHHHHHhcCCCCCCChHHHHHHHHHH
Q 017760 229 FSLLKAKDELCYVPIVSPREGMAATISY 256 (366)
Q Consensus 229 ~d~~ka~~~LG~~p~~~~~e~l~~~v~~ 256 (366)
+|+.|+++.+|+.|. +++++++++++.
T Consensus 253 L~~~k~~~~~g~~~~-~w~~~l~~~~~~ 279 (281)
T COG1091 253 LDTKKLEKAFGLSLP-EWREALKALLDE 279 (281)
T ss_pred cchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence 799999999999886 899999988764
No 57
>PRK12320 hypothetical protein; Provisional
Probab=99.64 E-value=4.5e-15 Score=152.08 Aligned_cols=136 Identities=18% Similarity=0.112 Sum_probs=94.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------- 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------- 65 (366)
|||+||||+||+|++|++.|+++| ++|+++++.+... ..++++++++|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G-~~Vi~ldr~~~~~-----~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~~~ 74 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAG-HTVSGIAQHPHDA-----LDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSA 74 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCChhhc-----ccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCccc
Confidence 479999999999999999999999 5999999864321 11233344333
Q ss_pred -------------------------cc---------------CCCCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCC
Q 017760 66 -------------------------RK---------------NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP 105 (366)
Q Consensus 66 -------------------------ks---------------~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~ 105 (366)
-| ...++++++++|++++|||+......+++........
T Consensus 75 ~~~vNv~Gt~nLleAA~~~GvRiV~~SS~~G~~~~~~~aE~ll~~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~- 153 (699)
T PRK12320 75 PGGVGITGLAHVANAAARAGARLLFVSQAAGRPELYRQAETLVSTGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKV- 153 (699)
T ss_pred hhhHHHHHHHHHHHHHHHcCCeEEEEECCCCCCccccHHHHHHHhcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHH-
Confidence 00 1123578999999999999765433333333222110
Q ss_pred eeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHh
Q 017760 106 FKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKT 172 (366)
Q Consensus 106 ~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~ 172 (366)
. +....++||+|++++++.+++ . . .+++|||++++.+|+.|+++.+...
T Consensus 154 ----~-~~pI~vIyVdDvv~alv~al~-----------~-~-~~GiyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 154 ----S-ARPIRVLHLDDLVRFLVLALN-----------T-D-RNGVVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred ----c-CCceEEEEHHHHHHHHHHHHh-----------C-C-CCCEEEEeCCCeeEHHHHHHHHHHh
Confidence 0 122345899999999999986 2 1 2349999999999999988888665
No 58
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.62 E-value=5e-15 Score=142.40 Aligned_cols=104 Identities=23% Similarity=0.195 Sum_probs=73.9
Q ss_pred CceEEEEeCCccccCCCCC------CHHHHHHHHHcCCCCeeecCCC-cceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLVPFKIGEPS-VKTDWIYVDNLVLALILASMGLLDDIPGQKGR 144 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~------~l~~~i~~~~~g~~~~~~g~~~-~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~ 144 (366)
+++++++||+.+||+...+ .+.+++........ .++.. ...+++|+||++++++.++. .
T Consensus 183 g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~vddva~ai~~~~~-----------~ 248 (367)
T TIGR01746 183 GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA---YPDSPELTEDLTPVDYVARAIVALSS-----------Q 248 (367)
T ss_pred CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC---CCCCCccccCcccHHHHHHHHHHHHh-----------C
Confidence 7889999999999984322 23344443322221 22222 36789999999999999886 2
Q ss_pred CC--CCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHH
Q 017760 145 PI--ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFL 190 (366)
Q Consensus 145 ~~--~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~ 190 (366)
+. ..+++||+++++++++.|+++.+.+ +|++.+....+.|...+.
T Consensus 249 ~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~~ 295 (367)
T TIGR01746 249 PAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQRLE 295 (367)
T ss_pred CCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHHHH
Confidence 22 2378999999999999999999999 898877656666655443
No 59
>PLN02583 cinnamoyl-CoA reductase
Probab=99.62 E-value=8.1e-15 Score=137.96 Aligned_cols=83 Identities=16% Similarity=0.041 Sum_probs=58.6
Q ss_pred CceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCcc
Q 017760 72 CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQP 151 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~ 151 (366)
+++++++||+.||||+.....+ ...+.. ...++ ...+||||+|+|+|+++|++ .+...+ .
T Consensus 182 gi~~v~lrp~~v~Gp~~~~~~~-----~~~~~~-~~~~~--~~~~~v~V~Dva~a~~~al~-----------~~~~~~-r 241 (297)
T PLN02583 182 GVNMVSINAGLLMGPSLTQHNP-----YLKGAA-QMYEN--GVLVTVDVNFLVDAHIRAFE-----------DVSSYG-R 241 (297)
T ss_pred CCcEEEEcCCcccCCCCCCchh-----hhcCCc-ccCcc--cCcceEEHHHHHHHHHHHhc-----------CcccCC-c
Confidence 6789999999999998753222 222322 22222 34689999999999999997 334444 7
Q ss_pred EEecCCCCCCHHHHHHHHHHhcC
Q 017760 152 YFVSDGFPINTFEFIGPLLKTLD 174 (366)
Q Consensus 152 y~I~~~~~vs~~e~~~~l~~~lg 174 (366)
|+++++......++.+.+.+.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~p 264 (297)
T PLN02583 242 YLCFNHIVNTEEDAVKLAQMLSP 264 (297)
T ss_pred EEEecCCCccHHHHHHHHHHhCC
Confidence 88887765556778888888775
No 60
>PLN02996 fatty acyl-CoA reductase
Probab=99.61 E-value=6e-15 Score=147.79 Aligned_cols=98 Identities=18% Similarity=0.162 Sum_probs=77.2
Q ss_pred CceEEEEeCCccccCCCCCC---------HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPGEERH---------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 142 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~~---------l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 142 (366)
+++++++||++||||+..+. ...++..+.+|....++|++++.+|++||||+|+|++.++.+-.
T Consensus 253 ~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~------- 325 (491)
T PLN02996 253 NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHA------- 325 (491)
T ss_pred CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhh-------
Confidence 57799999999999986432 23445555677777788999999999999999999999986300
Q ss_pred CCCCCCCccEEecCC--CCCCHHHHHHHHHHhcCCCC
Q 017760 143 GRPIASGQPYFVSDG--FPINTFEFIGPLLKTLDYDL 177 (366)
Q Consensus 143 ~~~~~~g~~y~I~~~--~~vs~~e~~~~l~~~lg~~~ 177 (366)
.....+++||++++ +++|+.|+++.+.+..+..+
T Consensus 326 -~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 326 -GGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred -ccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence 01124679999988 89999999999999887543
No 61
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.58 E-value=2.1e-14 Score=128.71 Aligned_cols=222 Identities=17% Similarity=0.099 Sum_probs=152.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc-cccC--CCeEEEEcc-----------------------
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH-LLIN--HGVHCIQGL----------------------- 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~-~~~~--~~v~~i~gD----------------------- 65 (366)
..+-|.|||||+|+.++.+|.+.| .||++-.|..+....+ .+.. .++-++.-|
T Consensus 62 iVaTVFGAtGFlGryvvnklak~G-SQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr 140 (391)
T KOG2865|consen 62 IVATVFGATGFLGRYVVNKLAKMG-SQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR 140 (391)
T ss_pred eEEEEecccccccHHHHHHHhhcC-CeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence 346789999999999999999999 5999987765443211 0000 233333333
Q ss_pred -------------------------------------------------cc-------CCCCCceEEEEeCCccccCCCC
Q 017760 66 -------------------------------------------------RK-------NNRKCLYTCAVRPAAIYGPGEE 89 (366)
Q Consensus 66 -------------------------------------------------ks-------~~~~~l~~~ilRp~~iyGp~~~ 89 (366)
++ ..+.-..++|+||+.|||..|+
T Consensus 141 d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~s~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~eDr 220 (391)
T KOG2865|consen 141 DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVKSPSRMLRSKAAGEEAVRDAFPEATIIRPADIYGTEDR 220 (391)
T ss_pred ccccCCcccccccchHHHHHHHHHHhhChhheeehhhccccccChHHHHHhhhhhHHHHHhhCCcceeechhhhcccchh
Confidence 11 1122345999999999999654
Q ss_pred CCHHHHHHHHHcCCCCeeecCC-CcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHH
Q 017760 90 RHLPRIVSLAKLGLVPFKIGEP-SVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGP 168 (366)
Q Consensus 90 ~~l~~~i~~~~~g~~~~~~g~~-~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~ 168 (366)
++.......++=.++...+.| +...++|||-|++.+++.|.+ ++...|++|...++......|+++.
T Consensus 221 -fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvk-----------Dp~s~Gktye~vGP~~yql~eLvd~ 288 (391)
T KOG2865|consen 221 -FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVK-----------DPDSMGKTYEFVGPDRYQLSELVDI 288 (391)
T ss_pred -HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhcc-----------CccccCceeeecCCchhhHHHHHHH
Confidence 677777666654445556555 467799999999999999997 7788999999999999999999999
Q ss_pred HHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccc-eecHHHHHHhcCCCCCCChH
Q 017760 169 LLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTH-YFSLLKAKDELCYVPIVSPR 247 (366)
Q Consensus 169 l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~-~~d~~ka~~~LG~~p~~~~~ 247 (366)
+-+....-......|.+..+.++...+.....+. +..+++++.+....++. ..+.....++||..+. .++
T Consensus 289 my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~--------~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~t-~le 359 (391)
T KOG2865|consen 289 MYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFP--------PPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVLT-KLE 359 (391)
T ss_pred HHHHHhhccccccCCcHHHHHHHhhhheeecCCC--------CCCCCCHHHhhheeehhhhcCCCCcHhhcCceee-ecc
Confidence 9888766444445555555555544444211111 23348888888887766 5667777788998864 555
Q ss_pred HHHHHHHH
Q 017760 248 EGMAATIS 255 (366)
Q Consensus 248 e~l~~~v~ 255 (366)
-.--+.+.
T Consensus 360 ~~~~e~l~ 367 (391)
T KOG2865|consen 360 LYPVEFLR 367 (391)
T ss_pred cccHHHHH
Confidence 43333333
No 62
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.52 E-value=3.5e-13 Score=118.56 Aligned_cols=135 Identities=20% Similarity=0.133 Sum_probs=92.8
Q ss_pred HHHHHHHHHcCC-CCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHH
Q 017760 92 LPRIVSLAKLGL-VPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLL 170 (366)
Q Consensus 92 l~~~i~~~~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~ 170 (366)
+.+-+..+.-|+ ..+..|+-++.+||-|+.|.++|+.+.+++ ....-|.|+.|+..|++||.+.-.
T Consensus 228 ItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~-------------d~PdDfViATge~hsVrEF~~~aF 294 (376)
T KOG1372|consen 228 ITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQ-------------DSPDDFVIATGEQHSVREFCNLAF 294 (376)
T ss_pred HHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhc-------------CCCCceEEecCCcccHHHHHHHHH
Confidence 344445555553 345678889999999999999999999972 234569999999999999999888
Q ss_pred HhcCCCCCcc--ccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHH
Q 017760 171 KTLDYDLPKS--WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPRE 248 (366)
Q Consensus 171 ~~lg~~~~~~--~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e 248 (366)
...|...... .+. . ....-.+-. +-...+..++|.|+..+ .-|.+|+++.|||+|++.++|
T Consensus 295 ~~ig~~l~Weg~gv~--~---------~~~n~~g~v--~V~v~~kYyRPtEVd~L----qGdasKAk~~LgW~pkv~f~e 357 (376)
T KOG1372|consen 295 AEIGEVLNWEGEGVD--E---------VGKNDDGVV--RVKVDPKYYRPTEVDTL----QGDASKAKKTLGWKPKVTFPE 357 (376)
T ss_pred HhhCcEEeecccccc--c---------ccccCCceE--EEEecccccCcchhhhh----cCChHHHHHhhCCCCccCHHH
Confidence 7777331100 000 0 000000000 00124566788888765 569999999999999999999
Q ss_pred HHHHHHHH
Q 017760 249 GMAATISY 256 (366)
Q Consensus 249 ~l~~~v~~ 256 (366)
-+++++..
T Consensus 358 LVkeMv~~ 365 (376)
T KOG1372|consen 358 LVKEMVAS 365 (376)
T ss_pred HHHHHHHh
Confidence 99998864
No 63
>PLN02778 3,5-epimerase/4-reductase
Probab=99.50 E-value=1.3e-12 Score=123.00 Aligned_cols=133 Identities=12% Similarity=0.013 Sum_probs=84.3
Q ss_pred EEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEe
Q 017760 75 TCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFV 154 (366)
Q Consensus 75 ~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I 154 (366)
..++|+...+|++.. ....++..+..+..+...+ .+++|++|+++|++.+++ . .. +++||+
T Consensus 158 ~~~lr~~~~~~~~~~-~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~-----------~-~~-~g~yNi 218 (298)
T PLN02778 158 VCTLRVRMPISSDLS-NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAK-----------R-NL-TGIYNF 218 (298)
T ss_pred cEEeeecccCCcccc-cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHh-----------C-CC-CCeEEe
Confidence 345666555555322 2344666666665433332 379999999999999985 2 22 359999
Q ss_pred cCCCCCCHHHHHHHHHHhcCCCCC--ccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhcc-cceecH
Q 017760 155 SDGFPINTFEFIGPLLKTLDYDLP--KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGV-THYFSL 231 (366)
Q Consensus 155 ~~~~~vs~~e~~~~l~~~lg~~~~--~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~-~~~~d~ 231 (366)
++++++|..|+++.+++.+|.+.+ .+.++ .. ....+... +..+|+
T Consensus 219 gs~~~iS~~el~~~i~~~~~~~~~~~~~~i~-~~-------------------------------~~~~~~~~~~~~Ld~ 266 (298)
T PLN02778 219 TNPGVVSHNEILEMYRDYIDPSFTWKNFTLE-EQ-------------------------------AKVIVAPRSNNELDT 266 (298)
T ss_pred CCCCcccHHHHHHHHHHHhCCCceeccccHH-HH-------------------------------HHHHhCCCccccccH
Confidence 999999999999999999996432 11111 00 00001111 115899
Q ss_pred HHHHHhcCCCCCCChHHHHHHHHHHHHh
Q 017760 232 LKAKDELCYVPIVSPREGMAATISYWQD 259 (366)
Q Consensus 232 ~ka~~~LG~~p~~~~~e~l~~~v~~~~~ 259 (366)
+|+++.++-.+. ..+++++...+-.|.
T Consensus 267 ~k~~~~~~~~~~-~~~~~~~~~~~~~~~ 293 (298)
T PLN02778 267 TKLKREFPELLP-IKESLIKYVFEPNKK 293 (298)
T ss_pred HHHHHhcccccc-hHHHHHHHHHHHHHh
Confidence 999998875443 557777777766644
No 64
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.40 E-value=2e-12 Score=131.28 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=74.1
Q ss_pred CceEEEEeCCcc----------ccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCC
Q 017760 72 CLYTCAVRPAAI----------YGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 141 (366)
Q Consensus 72 ~l~~~ilRp~~i----------yGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 141 (366)
+++++|+||+.| |++++....+.++.. .+|....++++++...|.|+||++|++++.|+.....
T Consensus 367 ~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~-g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~----- 440 (605)
T PLN02503 367 DIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYY-GKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGG----- 440 (605)
T ss_pred CCCEEEEcCCEecccccCCccccccCccccchhhhhe-eccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhc-----
Confidence 688999999999 667655445555443 4777767889999999999999999999999532111
Q ss_pred CCCCCCCCccEEecCC--CCCCHHHHHHHHHHhcCC
Q 017760 142 KGRPIASGQPYFVSDG--FPINTFEFIGPLLKTLDY 175 (366)
Q Consensus 142 ~~~~~~~g~~y~I~~~--~~vs~~e~~~~l~~~lg~ 175 (366)
.....+++||++++ +|+++.|+.+.+.+....
T Consensus 441 --~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 441 --AAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred --ccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 11235789999988 899999999999886654
No 65
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.4e-11 Score=120.82 Aligned_cols=155 Identities=19% Similarity=0.290 Sum_probs=127.1
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc----------------
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL---------------- 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD---------------- 65 (366)
+..+++|+||||+|-+|+.+|+++++.+..+++.+++++.+-.. ..+ ...++.++.||
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kv 326 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKV 326 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCC
Confidence 45689999999999999999999999988899999998754321 111 13677888888
Q ss_pred -------------------------------------------------------------------------ccCCCC-
Q 017760 66 -------------------------------------------------------------------------RKNNRK- 71 (366)
Q Consensus 66 -------------------------------------------------------------------------ks~~~~- 71 (366)
.+.+..
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvmGaTKr~aE~~~~a~~~~~~~ 406 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVMGATKRLAEKLFQAANRNVSG 406 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHhhHHHHHHHHHHHHHhhccCC
Confidence 011122
Q ss_pred -CceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 017760 72 -CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ 150 (366)
Q Consensus 72 -~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~ 150 (366)
+...|++|.|||.|.+. +.+|-+.+++++|.++ .+.+++..+=|..++|.|+.++.|.. ....|+
T Consensus 407 ~~T~f~~VRFGNVlGSrG-SViPlFk~QI~~Ggpl-TvTdp~mtRyfMTI~EAv~LVlqA~a------------~~~gGe 472 (588)
T COG1086 407 TGTRFCVVRFGNVLGSRG-SVIPLFKKQIAEGGPL-TVTDPDMTRFFMTIPEAVQLVLQAGA------------IAKGGE 472 (588)
T ss_pred CCcEEEEEEecceecCCC-CCHHHHHHHHHcCCCc-cccCCCceeEEEEHHHHHHHHHHHHh------------hcCCCc
Confidence 58899999999999864 4899999999999875 46788999999999999999999984 356788
Q ss_pred cEEecCCCCCCHHHHHHHHHHhcCCC
Q 017760 151 PYFVSDGFPINTFEFIGPLLKTLDYD 176 (366)
Q Consensus 151 ~y~I~~~~~vs~~e~~~~l~~~lg~~ 176 (366)
+|-.--|+|++..|+++.+.+..|+.
T Consensus 473 ifvldMGepvkI~dLAk~mi~l~g~~ 498 (588)
T COG1086 473 IFVLDMGEPVKIIDLAKAMIELAGQT 498 (588)
T ss_pred EEEEcCCCCeEHHHHHHHHHHHhCCC
Confidence 88888889999999999999999844
No 66
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.29 E-value=8.7e-12 Score=114.95 Aligned_cols=149 Identities=19% Similarity=0.288 Sum_probs=107.7
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeE----EEEcc------------------
Q 017760 14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVH----CIQGL------------------ 65 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~----~i~gD------------------ 65 (366)
||||||+|.+|+.||++|++.+..+++++|+++..-.. ..+ ..++++ .+.||
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999999999987789999998643211 111 123343 34777
Q ss_pred -------------------------------------------------------------------------ccCCCCC
Q 017760 66 -------------------------------------------------------------------------RKNNRKC 72 (366)
Q Consensus 66 -------------------------------------------------------------------------ks~~~~~ 72 (366)
......+
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~PtnvmGatKrlaE~l~~~~~~~~~~~~ 160 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPTNVMGATKRLAEKLVQAANQYSGNSD 160 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS--SHHHHHHHHHHHHHHHHCCTSSSS-
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCCcHHHHHHHHHHHHHHHHhhhCCCCC
Confidence 1122346
Q ss_pred ceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccE
Q 017760 73 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPY 152 (366)
Q Consensus 73 l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y 152 (366)
...+++|.|+|.|... +.+|.+.+++++|.++. +.+++..+=|+.+++.++.++.|... ...|++|
T Consensus 161 t~f~~VRFGNVlgS~G-SVip~F~~Qi~~g~PlT-vT~p~mtRffmti~EAv~Lvl~a~~~------------~~~geif 226 (293)
T PF02719_consen 161 TKFSSVRFGNVLGSRG-SVIPLFKKQIKNGGPLT-VTDPDMTRFFMTIEEAVQLVLQAAAL------------AKGGEIF 226 (293)
T ss_dssp -EEEEEEE-EETTGTT-SCHHHHHHHHHTTSSEE-ECETT-EEEEE-HHHHHHHHHHHHHH--------------TTEEE
T ss_pred cEEEEEEecceecCCC-cHHHHHHHHHHcCCcce-eCCCCcEEEEecHHHHHHHHHHHHhh------------CCCCcEE
Confidence 8999999999999854 48999999999998754 66778999999999999999999853 4568888
Q ss_pred EecCCCCCCHHHHHHHHHHhcCCC
Q 017760 153 FVSDGFPINTFEFIGPLLKTLDYD 176 (366)
Q Consensus 153 ~I~~~~~vs~~e~~~~l~~~lg~~ 176 (366)
..--|++++..|+++.+.+..|++
T Consensus 227 vl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 227 VLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp EE---TCEECCCHHHHHHHHTT-E
T ss_pred EecCCCCcCHHHHHHHHHhhcccc
Confidence 888889999999999999999864
No 67
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.26 E-value=7e-11 Score=109.13 Aligned_cols=152 Identities=26% Similarity=0.225 Sum_probs=113.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------- 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------- 65 (366)
++|+||||||++|++++++|+++| ++|++..|++....... .+++...+|
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~-~~v~~~~r~~~~~~~~~---~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~ 76 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARG-HEVRAAVRNPEAAAALA---GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDG 76 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCC-CEEEEEEeCHHHHHhhc---CCcEEEEeccCCHhHHHHHhccccEEEEEeccccc
Confidence 479999999999999999999999 59999999865443222 455555555
Q ss_pred --------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCCHHHH
Q 017760 66 --------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERHLPRI 95 (366)
Q Consensus 66 --------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~l~~~ 95 (366)
+.....+++++++|++.+|....... .
T Consensus 77 ~~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~~~---~ 153 (275)
T COG0702 77 SDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGAAF---I 153 (275)
T ss_pred ccchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCCccHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccchhH---H
Confidence 01344578889999877777654422 2
Q ss_pred HHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCC
Q 017760 96 VSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDY 175 (366)
Q Consensus 96 i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~ 175 (366)
......+.+....+.+ ..+++.++|++.+...++. .+...++.|.+++++..+..|..+.+.+..|.
T Consensus 154 ~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~-----------~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr 220 (275)
T COG0702 154 EAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALD-----------APATAGRTYELAGPEALTLAELASGLDYTIGR 220 (275)
T ss_pred HHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhc-----------CCcccCcEEEccCCceecHHHHHHHHHHHhCC
Confidence 2333344443333443 7899999999999999986 45578899999999999999999999999998
Q ss_pred CCCccccC
Q 017760 176 DLPKSWLA 183 (366)
Q Consensus 176 ~~~~~~lp 183 (366)
+......|
T Consensus 221 ~~~~~~~~ 228 (275)
T COG0702 221 PVGLIPEA 228 (275)
T ss_pred cceeeCCc
Confidence 86654333
No 68
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.19 E-value=3.6e-10 Score=127.09 Aligned_cols=102 Identities=20% Similarity=0.197 Sum_probs=71.0
Q ss_pred CceEEEEeCCccccCCCCC------CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP 145 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~------~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~ 145 (366)
+++++++||+.|||++..+ .+..++..... ....++....++|++|||++++++.++.. ..
T Consensus 1168 g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~Vddva~ai~~~~~~----------~~ 1234 (1389)
T TIGR03443 1168 GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQ---LGLIPNINNTVNMVPVDHVARVVVAAALN----------PP 1234 (1389)
T ss_pred CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHH---hCCcCCCCCccccccHHHHHHHHHHHHhC----------Cc
Confidence 6889999999999997542 23333332221 11233445668999999999999999862 11
Q ss_pred -CCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHH
Q 017760 146 -IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA 187 (366)
Q Consensus 146 -~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~ 187 (366)
...+.+||++++..+++.++++.+.+ .|++.+....+.|..
T Consensus 1235 ~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~w~~ 1276 (1389)
T TIGR03443 1235 KESELAVAHVTGHPRIRFNDFLGTLKT-YGYDVEIVDYVHWRK 1276 (1389)
T ss_pred ccCCCCEEEeCCCCCCcHHHHHHHHHH-hCCCCCccCHHHHHH
Confidence 12456899999999999999999975 477666555444444
No 69
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.13 E-value=1.4e-10 Score=100.97 Aligned_cols=101 Identities=29% Similarity=0.323 Sum_probs=78.9
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc----------------------------
Q 017760 14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL---------------------------- 65 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD---------------------------- 65 (366)
|+|+||||++|++++++|+++| ++|+++.|++.+... ..+++.+++|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~-~~V~~~~R~~~~~~~----~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~ 75 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG-HEVTALVRSPSKAED----SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDV 75 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGHHH----CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHH
T ss_pred eEEECCCChHHHHHHHHHHHCC-CEEEEEecCchhccc----ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccc
Confidence 7999999999999999999999 699999999764322 6789999999
Q ss_pred -----------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCCH
Q 017760 66 -----------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERHL 92 (366)
Q Consensus 66 -----------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~l 92 (366)
+..++.+++++++||+.+||+....
T Consensus 76 ~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~~-- 153 (183)
T PF13460_consen 76 DAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNPSRS-- 153 (183)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSSS--
T ss_pred cccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCcc--
Confidence 0022358899999999999996431
Q ss_pred HHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760 93 PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132 (366)
Q Consensus 93 ~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 132 (366)
+. ....++....++|+++|+|++++.+++
T Consensus 154 ---------~~--~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 154 ---------YR--LIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp ---------EE--EESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred ---------ee--EEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 01 111134556799999999999999886
No 70
>PRK09135 pteridine reductase; Provisional
Probab=99.12 E-value=6.1e-10 Score=101.29 Aligned_cols=37 Identities=30% Similarity=0.391 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++|+||||+|++|++++++|.++|+ +|++++|+.
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~ 40 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS 40 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence 4457899999999999999999999995 899999864
No 71
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.12 E-value=1.7e-11 Score=111.13 Aligned_cols=149 Identities=20% Similarity=0.188 Sum_probs=106.6
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc----------------------------
Q 017760 14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL---------------------------- 65 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD---------------------------- 65 (366)
|+||||||.+|+.+++.|++.+ ++|+++.|+.++.....+...+++.+.+|
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~-~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~ 79 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAG-FSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSE 79 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-GCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCH
T ss_pred CEEECCccHHHHHHHHHHHhCC-CCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhh
Confidence 7999999999999999999988 69999999885544455556788888888
Q ss_pred ------------------------------------------------ccCCCCCceEEEEeCCccccCCCCCCHHHHHH
Q 017760 66 ------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 97 (366)
Q Consensus 66 ------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~~~l~~~i~ 97 (366)
+..++.+++++++||+..+......+.+ ..
T Consensus 80 ~~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e~~~~~~~~--~~ 157 (233)
T PF05368_consen 80 LEQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFMENLLPPFAP--VV 157 (233)
T ss_dssp HHHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEHHHHHTTTHH--TT
T ss_pred hhhhhhHHHhhhccccceEEEEEecccccccccccccchhhhhhhhhhhhhhhccccceeccccchhhhhhhhhcc--cc
Confidence 1122348889999998765532111111 00
Q ss_pred HHHcC-CCCeeecCCCcceece-eHHHHHHHHHHHHhccccCCCCCCCCCCC--CCccEEecCCCCCCHHHHHHHHHHhc
Q 017760 98 LAKLG-LVPFKIGEPSVKTDWI-YVDNLVLALILASMGLLDDIPGQKGRPIA--SGQPYFVSDGFPINTFEFIGPLLKTL 173 (366)
Q Consensus 98 ~~~~g-~~~~~~g~~~~~~~~v-~vdDla~a~~~a~~~l~~~~~~~~~~~~~--~g~~y~I~~~~~vs~~e~~~~l~~~l 173 (366)
..... ......++++....++ +.+|++++...++. ++.. .++.+++++ +.+|..|+++.+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~-----------~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~ 225 (233)
T PF05368_consen 158 DIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILL-----------DPEKHNNGKTIFLAG-ETLTYNEIAAILSKVL 225 (233)
T ss_dssp CSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHH-----------SGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHH
T ss_pred cccccceEEEEccCCCccccccccHHHHHHHHHHHHc-----------ChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHH
Confidence 11111 1345667777777886 99999999999997 3333 467788765 7799999999999999
Q ss_pred CCCC
Q 017760 174 DYDL 177 (366)
Q Consensus 174 g~~~ 177 (366)
|.+.
T Consensus 226 G~~v 229 (233)
T PF05368_consen 226 GKKV 229 (233)
T ss_dssp TSEE
T ss_pred CCcc
Confidence 9763
No 72
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.11 E-value=6.8e-10 Score=101.84 Aligned_cols=40 Identities=28% Similarity=0.495 Sum_probs=34.7
Q ss_pred ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+...+++|+||||+|++|+++++.|+++| ++|+++.|++.
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g-~~V~~~~R~~~ 52 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKG-FAVKAGVRDVD 52 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCC-CEEEEEecCHH
Confidence 34557899999999999999999999999 58999987653
No 73
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.09 E-value=5.8e-10 Score=116.43 Aligned_cols=96 Identities=15% Similarity=0.085 Sum_probs=63.6
Q ss_pred eceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHH
Q 017760 116 DWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFS 195 (366)
Q Consensus 116 ~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e 195 (366)
+..+++|++.+++.+++ . ..+++||+++++++|++|+++.+++.++.......++..... +
T Consensus 564 ~~~~~~~~~~~~~~l~~-----------~--~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~------~ 624 (668)
T PLN02260 564 SMTVLDELLPISIEMAK-----------R--NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQA------K 624 (668)
T ss_pred CceehhhHHHHHHHHHH-----------h--CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhh------h
Confidence 46788999999888875 2 225799999999999999999999988522111111111000 0
Q ss_pred HHHHhhhhccccccCCCCCCcHHhhhhhcccceecHHHHHHhcCCCCCCChHHHHHHHHH
Q 017760 196 FFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATIS 255 (366)
Q Consensus 196 ~~~~~~~~~~~~~~~~~p~l~~~ev~~~~~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~ 255 (366)
.. ..+.| .. .+|++|+++.+|. +. +++++|++++.
T Consensus 625 ----~~-------~a~rp-----------~~-~l~~~k~~~~~~~-~~-~~~~~l~~~~~ 659 (668)
T PLN02260 625 ----VI-------VAPRS-----------NN-EMDASKLKKEFPE-LL-SIKESLIKYVF 659 (668)
T ss_pred ----Hh-------hCCCc-----------cc-cccHHHHHHhCcc-cc-chHHHHHHHHh
Confidence 00 00111 11 4899999999998 54 89999998874
No 74
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=99.03 E-value=2.1e-09 Score=93.90 Aligned_cols=103 Identities=20% Similarity=0.152 Sum_probs=78.6
Q ss_pred CCCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760 70 RKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG 149 (366)
Q Consensus 70 ~~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g 149 (366)
....+++++|.+.|.|.+.. .+..++--.+.|.- ...|+|++.+.|||++|++..+..+++ ++...|
T Consensus 169 ~~~~r~~~iR~GvVlG~gGG-a~~~M~lpF~~g~G-GPlGsG~Q~fpWIHv~DL~~li~~ale-----------~~~v~G 235 (315)
T KOG3019|consen 169 NKDVRVALIRIGVVLGKGGG-ALAMMILPFQMGAG-GPLGSGQQWFPWIHVDDLVNLIYEALE-----------NPSVKG 235 (315)
T ss_pred CcceeEEEEEEeEEEecCCc-chhhhhhhhhhccC-CcCCCCCeeeeeeehHHHHHHHHHHHh-----------cCCCCc
Confidence 34578999999999999865 33333333333332 236899999999999999999999998 444444
Q ss_pred ccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHH
Q 017760 150 QPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA 187 (366)
Q Consensus 150 ~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~ 187 (366)
+.|-..+++++..||.+.+.+.++.+ ..+.+|..+.
T Consensus 236 -ViNgvAP~~~~n~Ef~q~lg~aL~Rp-~~~pvP~fvv 271 (315)
T KOG3019|consen 236 -VINGVAPNPVRNGEFCQQLGSALSRP-SWLPVPDFVV 271 (315)
T ss_pred -eecccCCCccchHHHHHHHHHHhCCC-cccCCcHHHH
Confidence 88888999999999999999999966 4455665544
No 75
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.98 E-value=3.4e-09 Score=96.15 Aligned_cols=72 Identities=13% Similarity=0.039 Sum_probs=47.4
Q ss_pred CCceEEEEeCCccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCc
Q 017760 71 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ 150 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~ 150 (366)
.+++++++||+.++|+............ ... ......+++.+|+++++..+++. ......|+
T Consensus 177 ~~i~~~~i~pg~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~~~~dva~~~~~~~~~---------~~~~~~g~ 238 (249)
T PRK12825 177 YGITVNMVAPGDIDTDMKEATIEEAREA---KDA------ETPLGRSGTPEDIARAVAFLCSD---------ASDYITGQ 238 (249)
T ss_pred cCeEEEEEEECCccCCccccccchhHHh---hhc------cCCCCCCcCHHHHHHHHHHHhCc---------cccCcCCC
Confidence 5799999999999999754332211111 100 01123389999999999988852 02245689
Q ss_pred cEEecCCCCC
Q 017760 151 PYFVSDGFPI 160 (366)
Q Consensus 151 ~y~I~~~~~v 160 (366)
.|+++++.++
T Consensus 239 ~~~i~~g~~~ 248 (249)
T PRK12825 239 VIEVTGGVDV 248 (249)
T ss_pred EEEeCCCEee
Confidence 9999988654
No 76
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.97 E-value=7.8e-10 Score=101.25 Aligned_cols=39 Identities=36% Similarity=0.583 Sum_probs=34.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
+++++++||||+|++|++++++|+++|+ +|++++|++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~ 40 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEA 40 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHH
Confidence 4568999999999999999999999995 89999997643
No 77
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=98.96 E-value=1.3e-09 Score=99.99 Aligned_cols=38 Identities=42% Similarity=0.657 Sum_probs=34.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|+++++.|++.|+ +|++++|++.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~ 42 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQD 42 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChH
Confidence 4568999999999999999999999995 8999988763
No 78
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.95 E-value=6.9e-09 Score=93.98 Aligned_cols=39 Identities=38% Similarity=0.600 Sum_probs=34.2
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+|++++|+||||+|++|.++++.|.++|+ +|++++|++.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~ 40 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEE 40 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChh
Confidence 34567999999999999999999999995 8999998754
No 79
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.94 E-value=6.6e-10 Score=101.91 Aligned_cols=57 Identities=26% Similarity=0.313 Sum_probs=32.2
Q ss_pred CCceEEEEeCCccccCCCC------C-CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHH
Q 017760 71 KCLYTCAVRPAAIYGPGEE------R-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 127 (366)
Q Consensus 71 ~~l~~~ilRp~~iyGp~~~------~-~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~ 127 (366)
.+++++|+||+.|+|.... . ....+...+..|..+...++++...|++.||.+|+++
T Consensus 186 ~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 186 HGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp H---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred CCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 4899999999999994322 2 2234445566677666677777789999999999986
No 80
>PRK06482 short chain dehydrogenase; Provisional
Probab=98.94 E-value=4.1e-09 Score=97.84 Aligned_cols=82 Identities=13% Similarity=0.088 Sum_probs=55.1
Q ss_pred CCceEEEEeCCcc---ccCCCCC----------CHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccC
Q 017760 71 KCLYTCAVRPAAI---YGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 137 (366)
Q Consensus 71 ~~l~~~ilRp~~i---yGp~~~~----------~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 137 (366)
.+++++++||+.+ ||++... ....+...+..+.. .-+.+++|++++++.+++
T Consensus 169 ~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~d~~~~~~a~~~~~~----- 233 (276)
T PRK06482 169 FGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF----------AIPGDPQKMVQAMIASAD----- 233 (276)
T ss_pred cCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC----------CCCCCHHHHHHHHHHHHc-----
Confidence 5889999999887 7654321 01122222222221 113578999999999985
Q ss_pred CCCCCCCCCCCCccEEecCCCCCCHHHHHHHHHHhcC
Q 017760 138 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLD 174 (366)
Q Consensus 138 ~~~~~~~~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg 174 (366)
. ...+..||+++++..+..|+++.+.+.++
T Consensus 234 ------~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 234 ------Q-TPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred ------C-CCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 2 23356799999998999999888888775
No 81
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.93 E-value=4.8e-09 Score=102.35 Aligned_cols=101 Identities=19% Similarity=0.211 Sum_probs=72.9
Q ss_pred CCCCCceEEEEeCCccccCCCCCCHHH---------HHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCC
Q 017760 68 NNRKCLYTCAVRPAAIYGPGEERHLPR---------IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 138 (366)
Q Consensus 68 ~~~~~l~~~ilRp~~iyGp~~~~~l~~---------~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 138 (366)
...++++.+|+||+.|......++... ++-...+|.......|++...|.|.||.+|.+.+.++-+-..+
T Consensus 221 ~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~- 299 (467)
T KOG1221|consen 221 KEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGN- 299 (467)
T ss_pred hhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhcc-
Confidence 566799999999999999865433222 2223345666666789999999999999999999776321111
Q ss_pred CCCCCCCCCCCccEEecCC--CCCCHHHHHHHHHHhcC
Q 017760 139 PGQKGRPIASGQPYFVSDG--FPINTFEFIGPLLKTLD 174 (366)
Q Consensus 139 ~~~~~~~~~~g~~y~I~~~--~~vs~~e~~~~l~~~lg 174 (366)
.+.....+||++.+ .++|+.++.+...+...
T Consensus 300 -----~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 300 -----SKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE 332 (467)
T ss_pred -----CCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence 11133569999875 57999999999988875
No 82
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.93 E-value=1.5e-09 Score=99.09 Aligned_cols=36 Identities=44% Similarity=0.560 Sum_probs=32.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++||||+|++|+++++.|+++|+ +|++++|++.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~ 36 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEA 36 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 36899999999999999999999995 8999998753
No 83
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.92 E-value=5e-09 Score=95.36 Aligned_cols=37 Identities=35% Similarity=0.573 Sum_probs=33.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++|+||||+|++|.++++.|+++|+ +|++++|+.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~ 40 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICG 40 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 4567999999999999999999999995 899999874
No 84
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.91 E-value=4.2e-09 Score=96.58 Aligned_cols=82 Identities=17% Similarity=0.137 Sum_probs=54.5
Q ss_pred CceEEEEeCCccccCCCCCC---HHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760 72 CLYTCAVRPAAIYGPGEERH---LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 148 (366)
Q Consensus 72 ~l~~~ilRp~~iyGp~~~~~---l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 148 (366)
+++++++||+.++++..... .+.+...... .....++++++|++++++.++.. ......
T Consensus 170 gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~---------~~~~~~ 231 (257)
T PRK07074 170 GIRANAVAPGTVKTQAWEARVAANPQVFEELKK---------WYPLQDFATPDDVANAVLFLASP---------AARAIT 231 (257)
T ss_pred CeEEEEEEeCcCCcchhhcccccChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCc---------hhcCcC
Confidence 57778888888877743211 1112221111 11236789999999999999851 123456
Q ss_pred CccEEecCCCCCCHHHHHHHHHH
Q 017760 149 GQPYFVSDGFPINTFEFIGPLLK 171 (366)
Q Consensus 149 g~~y~I~~~~~vs~~e~~~~l~~ 171 (366)
|+.+++.+|...++.|+.+.+-+
T Consensus 232 g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 232 GVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred CcEEEeCCCcCcCChhhhhhhcc
Confidence 88999999999999999887754
No 85
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=98.88 E-value=4.1e-09 Score=96.71 Aligned_cols=38 Identities=29% Similarity=0.508 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.++++++||||+|++|.++++.|.++|+ +|++++++..
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~ 41 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPA 41 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHH
Confidence 4467899999999999999999999995 8999988754
No 86
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.83 E-value=2.7e-09 Score=99.09 Aligned_cols=37 Identities=27% Similarity=0.282 Sum_probs=33.0
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++++|+||||+|++|+++++.|.++| ++|++++|++.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g-~~V~~~~r~~~ 38 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERG-DRVVATARDTA 38 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEECCHH
Confidence 45789999999999999999999999 58999998753
No 87
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.82 E-value=3.8e-08 Score=91.29 Aligned_cols=37 Identities=32% Similarity=0.503 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|++|+++++.|.++|+ +|++++|+.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~ 41 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNP 41 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 5568999999999999999999999995 899999874
No 88
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=98.81 E-value=1.3e-07 Score=83.21 Aligned_cols=207 Identities=13% Similarity=0.070 Sum_probs=133.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCCCCcccccc---------cCCCeEEEEcc-------------
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTNSPWSHLL---------INHGVHCIQGL------------- 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~~~~~~~~---------~~~~v~~i~gD------------- 65 (366)
....+|+||||.|.+|..++..|... |-..|+.-|+.+++...-.. ..++.+-+..|
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALL 121 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALL 121 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcccccceeeeHHHHH
Confidence 34578999999999999999998865 65579998988776432111 11222222222
Q ss_pred --------------------------------------------ccCCCCCceEEEEeCCccccCCC-------------
Q 017760 66 --------------------------------------------RKNNRKCLYTCAVRPAAIYGPGE------------- 88 (366)
Q Consensus 66 --------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~------------- 88 (366)
.|-+....+.||=||-.|||...
T Consensus 122 SAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hr 201 (366)
T KOG2774|consen 122 SAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHR 201 (366)
T ss_pred HHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhh
Confidence 22344456789999999999531
Q ss_pred ------------------------CCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCC
Q 017760 89 ------------------------ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR 144 (366)
Q Consensus 89 ------------------------~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~ 144 (366)
+-.+.-+-.+..+|+. .-+-.++....+.|..||-.+++..+.+ + +
T Consensus 202 Fg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~-tCylrpdtrlpmmy~~dc~~~~~~~~~a---~------~ 271 (366)
T KOG2774|consen 202 FGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKH-TCYLRPDTRLPMMYDTDCMASVIQLLAA---D------S 271 (366)
T ss_pred cCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCc-ccccCCCccCceeehHHHHHHHHHHHhC---C------H
Confidence 0012234445567764 3344567788999999999999888863 1 4
Q ss_pred CCCCCccEEecCCCCCCHHHHHHHHHHhcCCCCCccccCHHHHHHHHHHHHHHHHhhhhccccccCCCCCCcHHhhhhhc
Q 017760 145 PIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG 224 (366)
Q Consensus 145 ~~~~g~~y~I~~~~~vs~~e~~~~l~~~lg~~~~~~~lp~~~~~~~a~~~e~~~~~~~~~~~~~~~~~p~l~~~ev~~~~ 224 (366)
.....++||+++- ..|.+|++..+.+.+.. +.+.+. + -++ +.-.-.
T Consensus 272 ~~lkrr~ynvt~~-sftpee~~~~~~~~~p~----~~i~y~---------------------------~-~sr-q~iad~ 317 (366)
T KOG2774|consen 272 QSLKRRTYNVTGF-SFTPEEIADAIRRVMPG----FEIDYD---------------------------I-CTR-QSIADS 317 (366)
T ss_pred HHhhhheeeecee-ccCHHHHHHHHHhhCCC----ceeecc---------------------------c-chh-hhhhhh
Confidence 4556689999754 58999999999887642 111100 0 001 111223
Q ss_pred ccceecHHHHHHhcCCCCCCChHHHHHHHHHHHHh
Q 017760 225 VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 259 (366)
Q Consensus 225 ~~~~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~ 259 (366)
++..+|.+.++++.-|+-.+++-.-+.-++.-.+.
T Consensus 318 wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~~~~ 352 (366)
T KOG2774|consen 318 WPMSLDDSEARTEWHEKHSLHLLSIISTVVAVHKS 352 (366)
T ss_pred cccccCchhHhhHHHHhhhhhHHHHHHHHHHHHHh
Confidence 45578999999999999888777766666655443
No 89
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.81 E-value=4.1e-09 Score=96.82 Aligned_cols=38 Identities=32% Similarity=0.558 Sum_probs=34.1
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+++++++||||+|++|+++++.|+++|+ +|++++|++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~ 45 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSE 45 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 35668999999999999999999999995 899999865
No 90
>PRK05876 short chain dehydrogenase; Provisional
Probab=98.76 E-value=3.7e-08 Score=91.64 Aligned_cols=39 Identities=36% Similarity=0.538 Sum_probs=34.5
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+++++++||||+|+||+++++.|.++|+ +|++.+++.+
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~ 41 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKP 41 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 35678999999999999999999999996 8999988753
No 91
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.75 E-value=4.2e-08 Score=88.49 Aligned_cols=38 Identities=34% Similarity=0.545 Sum_probs=34.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|+++++.|+++|+ +|++++|++.
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~ 42 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAA 42 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChH
Confidence 4468999999999999999999999995 8999998653
No 92
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.72 E-value=1.1e-07 Score=87.34 Aligned_cols=37 Identities=30% Similarity=0.456 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|++|+++++.|.++|+ +|++++|++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~ 42 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSE 42 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCch
Confidence 5568999999999999999999999995 899999874
No 93
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.70 E-value=1.4e-07 Score=86.32 Aligned_cols=35 Identities=26% Similarity=0.325 Sum_probs=31.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++++||||+|++|+++++.|.++|+ +|++++++..
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~ 37 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDD 37 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCch
Confidence 6799999999999999999999995 8999998753
No 94
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.66 E-value=1.1e-07 Score=88.48 Aligned_cols=37 Identities=30% Similarity=0.286 Sum_probs=33.0
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++++++||||+|++|+++++.|+++|+ +|++++|++.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~ 38 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPE 38 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHH
Confidence 457899999999999999999999994 8999988753
No 95
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.66 E-value=1.1e-07 Score=86.65 Aligned_cols=37 Identities=24% Similarity=0.402 Sum_probs=31.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|++|++++++|.++|+ +|++..++.
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~ 40 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKR 40 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCC
Confidence 4568999999999999999999999995 888776543
No 96
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.63 E-value=1.5e-07 Score=85.76 Aligned_cols=38 Identities=29% Similarity=0.286 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|+++++.|++.| ++|++++|+.+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G-~~V~~~~r~~~ 41 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAG-AHVVVNYRQKA 41 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCC-CEEEEEeCCch
Confidence 456899999999999999999999999 48999988653
No 97
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=98.63 E-value=1.2e-07 Score=86.76 Aligned_cols=38 Identities=32% Similarity=0.377 Sum_probs=34.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|.+++++|+++|+ +|++++|++.
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~ 45 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPA 45 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence 4578999999999999999999999995 8999998753
No 98
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.62 E-value=4.1e-07 Score=82.43 Aligned_cols=38 Identities=34% Similarity=0.436 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|+++++.|+++|+ +|+++.++..
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~ 40 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSE 40 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCch
Confidence 4568999999999999999999999995 8988877654
No 99
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.62 E-value=2.7e-07 Score=83.99 Aligned_cols=36 Identities=33% Similarity=0.498 Sum_probs=31.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
+++++++||||+|++|++++++|+++|+ +|++.+++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~ 39 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNS 39 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCC
Confidence 4568999999999999999999999995 88876554
No 100
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.62 E-value=5.6e-08 Score=89.21 Aligned_cols=36 Identities=28% Similarity=0.494 Sum_probs=32.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++|+||||+|++|.++++.|.++|+ +|++++++..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~ 37 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSE 37 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence 46899999999999999999999995 8999998754
No 101
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.60 E-value=4e-07 Score=82.95 Aligned_cols=38 Identities=32% Similarity=0.499 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|.+++++|.++| ++|++++|+..
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g-~~vi~~~r~~~ 41 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREG-ASVVVADINAE 41 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence 456899999999999999999999999 48999998753
No 102
>PRK08324 short chain dehydrogenase; Validated
Probab=98.59 E-value=1.8e-07 Score=97.87 Aligned_cols=38 Identities=39% Similarity=0.515 Sum_probs=34.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+.+++++||||+|++|.++++.|.+.|+ +|++++|+..
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r~~~ 457 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADLDEE 457 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeCCHH
Confidence 3568999999999999999999999996 8999998753
No 103
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.59 E-value=2.5e-07 Score=93.09 Aligned_cols=39 Identities=31% Similarity=0.404 Sum_probs=34.6
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+++++|+||||+|++|++++++|+++| ++|++++|+..
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G-~~Vval~Rn~e 115 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSAQ 115 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCC-CeEEEEeCCHH
Confidence 4556889999999999999999999999 59999998754
No 104
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.59 E-value=2.2e-07 Score=85.09 Aligned_cols=38 Identities=26% Similarity=0.366 Sum_probs=34.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|+||+++++.|+++|+ +|++++|++.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~ 40 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAE 40 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence 4568999999999999999999999995 8999998753
No 105
>PRK07775 short chain dehydrogenase; Provisional
Probab=98.58 E-value=2.8e-07 Score=85.54 Aligned_cols=37 Identities=27% Similarity=0.326 Sum_probs=33.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+.+++++||||+|++|+++++.|.++|+ +|++++++.
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~ 44 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGF-PVALGARRV 44 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 4567999999999999999999999995 899988764
No 106
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.58 E-value=5.1e-08 Score=91.98 Aligned_cols=54 Identities=26% Similarity=0.343 Sum_probs=41.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--------------ccccCCCeEEEEcc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--------------HLLINHGVHCIQGL 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--------------~~~~~~~v~~i~gD 65 (366)
++|++||||||+|++|+.+|+.+---+|+|+.|..+.+.. .....+.++.+.||
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gD 68 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGD 68 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecc
Confidence 4799999999999999999998752389999998763311 11223678888888
No 107
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.54 E-value=1.6e-07 Score=85.65 Aligned_cols=38 Identities=29% Similarity=0.413 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|+++++.|+++|+ +|++++|+..
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~ 40 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAE 40 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHH
Confidence 3567999999999999999999999994 8999988753
No 108
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.54 E-value=5.8e-07 Score=81.78 Aligned_cols=38 Identities=29% Similarity=0.473 Sum_probs=34.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|.++++.|+++|+ +|++++|++.
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~ 40 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEE 40 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 4567999999999999999999999995 8999999864
No 109
>PRK06180 short chain dehydrogenase; Provisional
Probab=98.53 E-value=3.1e-07 Score=85.34 Aligned_cols=38 Identities=26% Similarity=0.234 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+.+++++||||+|++|+++++.|+++|. +|++++|++.
T Consensus 2 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~ 39 (277)
T PRK06180 2 SSMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEA 39 (277)
T ss_pred CCCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHH
Confidence 3467899999999999999999999994 8999998753
No 110
>PRK06182 short chain dehydrogenase; Validated
Probab=98.49 E-value=2.6e-07 Score=85.55 Aligned_cols=53 Identities=30% Similarity=0.331 Sum_probs=39.8
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
++++++||||+|++|+++++.|.++| ++|++++|+.... ......+++++++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G-~~V~~~~r~~~~l--~~~~~~~~~~~~~D 54 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQG-YTVYGAARRVDKM--EDLASLGVHPLSLD 54 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHH--HHHHhCCCeEEEee
Confidence 46799999999999999999999999 5899999875321 11222345566666
No 111
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.46 E-value=8.7e-07 Score=80.79 Aligned_cols=37 Identities=41% Similarity=0.571 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|++|+++++.|+++|+ +|++++++.
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~ 42 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF 42 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch
Confidence 4568999999999999999999999995 899998875
No 112
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.45 E-value=1.6e-06 Score=78.83 Aligned_cols=35 Identities=31% Similarity=0.381 Sum_probs=29.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++||||+|++|.+++++|.+.|+ +|+..++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~-~vv~~~~~~ 36 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGY-AVCLNYLRN 36 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-eEEEecCCC
Confidence 35799999999999999999999995 787776543
No 113
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.44 E-value=5.5e-07 Score=80.64 Aligned_cols=36 Identities=25% Similarity=0.244 Sum_probs=32.0
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++++++||||+|++|+++++.|+++ . +|++++|++.
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~ 37 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAE 37 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHH
Confidence 3578999999999999999999998 4 8999998753
No 114
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.44 E-value=1.3e-06 Score=79.87 Aligned_cols=34 Identities=35% Similarity=0.535 Sum_probs=29.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d 43 (366)
+++++++||||+|++|+++++.|+++|+ +|+++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~ 37 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGA-LVAIHY 37 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEc
Confidence 4568999999999999999999999995 787753
No 115
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.43 E-value=1.2e-06 Score=79.39 Aligned_cols=37 Identities=38% Similarity=0.540 Sum_probs=33.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|++|.++++.|.++|+ +|++++|+.
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~ 43 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNA 43 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 5568999999999999999999999995 899999865
No 116
>PRK06194 hypothetical protein; Provisional
Probab=98.43 E-value=1.3e-06 Score=81.46 Aligned_cols=56 Identities=18% Similarity=0.130 Sum_probs=41.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc--CCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI--NHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~--~~~v~~i~gD 65 (366)
+++++++||||+|++|+++++.|+++|+ +|++++++...... ..+. ..++.++.+|
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 63 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECC
Confidence 4568999999999999999999999995 89999986432111 1111 2346667777
No 117
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.42 E-value=2e-06 Score=78.23 Aligned_cols=38 Identities=34% Similarity=0.385 Sum_probs=33.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|+++++.|.++|+ +|+++++++.
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~ 42 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAA 42 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence 4568999999999999999999999994 8999987653
No 118
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.42 E-value=9e-07 Score=83.01 Aligned_cols=39 Identities=28% Similarity=0.516 Sum_probs=34.2
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+++++++||||+|++|.+++++|+++|+ +|++++++..
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~ 81 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEH 81 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcc
Confidence 34568999999999999999999999995 8999988753
No 119
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.42 E-value=1.6e-06 Score=78.94 Aligned_cols=37 Identities=30% Similarity=0.564 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|++|.++++.|.++|. +|++++++.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~ 39 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQ 39 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 4568999999999999999999999995 899998875
No 120
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.42 E-value=2.6e-06 Score=78.15 Aligned_cols=36 Identities=31% Similarity=0.457 Sum_probs=31.6
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++++++||||+|++|+++++.|.++|+ +|++++++.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~ 43 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRS 43 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCC
Confidence 457899999999999999999999995 898887654
No 121
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.41 E-value=1.7e-06 Score=78.71 Aligned_cols=37 Identities=43% Similarity=0.732 Sum_probs=33.2
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++++++||||+|++|+++++.|++.|+ +|++++++..
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~ 38 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNRE 38 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHH
Confidence 468999999999999999999999995 8999988753
No 122
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.40 E-value=3.3e-06 Score=76.63 Aligned_cols=35 Identities=34% Similarity=0.686 Sum_probs=31.3
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
++++++||||+|++|+++++.|.++|+ +|+++++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~-~v~~~~~~ 39 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA-DVIVLDIH 39 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEcCc
Confidence 457899999999999999999999995 89998764
No 123
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.40 E-value=1.6e-06 Score=73.79 Aligned_cols=108 Identities=23% Similarity=0.268 Sum_probs=78.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc--------------------------
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL-------------------------- 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD-------------------------- 65 (366)
|||.|.|+||.+|++++++..++| |+|+++.|++.+-... +++...+.|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RG-HeVTAivRn~~K~~~~----~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~ 75 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRG-HEVTAIVRNASKLAAR----QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGAS 75 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCC-CeeEEEEeChHhcccc----ccceeecccccChhhhHhhhcCCceEEEeccCCCC
Confidence 689999999999999999999999 8999999997654221 344455555
Q ss_pred ----------------------------------------------------------------ccCCCCCceEEEEeCC
Q 017760 66 ----------------------------------------------------------------RKNNRKCLYTCAVRPA 81 (366)
Q Consensus 66 ----------------------------------------------------------------ks~~~~~l~~~ilRp~ 81 (366)
.-..+..+++|.+-|+
T Consensus 76 ~~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPa 155 (211)
T COG2910 76 DNDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPA 155 (211)
T ss_pred ChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcH
Confidence 0044556999999999
Q ss_pred ccccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760 82 AIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132 (366)
Q Consensus 82 ~iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 132 (366)
..|-||++.- ..+.|......+. .--++|...|.|-|++.-++
T Consensus 156 a~f~PGerTg------~yrlggD~ll~n~--~G~SrIS~aDYAiA~lDe~E 198 (211)
T COG2910 156 AFFEPGERTG------NYRLGGDQLLVNA--KGESRISYADYAIAVLDELE 198 (211)
T ss_pred HhcCCccccC------ceEeccceEEEcC--CCceeeeHHHHHHHHHHHHh
Confidence 9999987521 1122333333332 22378999999999999998
No 124
>PRK06128 oxidoreductase; Provisional
Probab=98.39 E-value=3.5e-06 Score=79.30 Aligned_cols=37 Identities=27% Similarity=0.476 Sum_probs=32.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|+||+++++.|.+.|+ +|++.+++.
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~ 89 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGA-DIALNYLPE 89 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCc
Confidence 4468999999999999999999999995 898877654
No 125
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.36 E-value=2.3e-06 Score=77.92 Aligned_cols=36 Identities=31% Similarity=0.446 Sum_probs=30.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEE-ecC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAF-DLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~-dr~ 45 (366)
|++++++||||+|++|+++++.|.++|+ +|++. +|+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~ 38 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARS 38 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence 4567999999999999999999999995 78764 444
No 126
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.36 E-value=3.7e-06 Score=76.40 Aligned_cols=37 Identities=30% Similarity=0.477 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|++|++++++|.++|+ +|++++|+.
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~ 40 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDP 40 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCH
Confidence 4567999999999999999999999995 899998864
No 127
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.33 E-value=3e-06 Score=76.87 Aligned_cols=32 Identities=34% Similarity=0.330 Sum_probs=28.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d 43 (366)
|++++||||+|++|+++++.|++.|+ +|++..
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~ 32 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGY-TVAVNY 32 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEe
Confidence 46899999999999999999999995 887753
No 128
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.32 E-value=7.4e-06 Score=75.12 Aligned_cols=39 Identities=33% Similarity=0.444 Sum_probs=34.7
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+++++++||||+|.+|+++++.|.++|+ +|++++|+..
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~ 44 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRP 44 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChh
Confidence 35678999999999999999999999995 8999998753
No 129
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.30 E-value=7.1e-06 Score=75.23 Aligned_cols=39 Identities=33% Similarity=0.415 Sum_probs=34.5
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+++++++||||+|++|+++++.|.+.|+ +|++++++..
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~ 47 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAE 47 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence 35678999999999999999999999995 8999988753
No 130
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.30 E-value=1.7e-06 Score=79.28 Aligned_cols=39 Identities=31% Similarity=0.513 Sum_probs=34.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
+++++++||||+|.+|++++++|+++|+ +|++++++++.
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~ 43 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPD 43 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhh
Confidence 5568999999999999999999999995 89999887653
No 131
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.29 E-value=4.7e-06 Score=75.50 Aligned_cols=37 Identities=35% Similarity=0.546 Sum_probs=32.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEE-ecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAF-DLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~-dr~~ 46 (366)
+++++++||||+|++|.++++.|+++|+ +|+++ ++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~ 40 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINE 40 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCH
Confidence 4567999999999999999999999995 89888 7764
No 132
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.26 E-value=5.7e-06 Score=74.91 Aligned_cols=34 Identities=38% Similarity=0.419 Sum_probs=31.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++++||||+|++|+++++.|.++|+ +|+++++++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~ 36 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSG 36 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCc
Confidence 5899999999999999999999995 899999875
No 133
>PRK09186 flagellin modification protein A; Provisional
Probab=98.26 E-value=3.8e-06 Score=76.73 Aligned_cols=38 Identities=39% Similarity=0.609 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|+++++.|.+.|+ +|++++|++.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~ 39 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKE 39 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChH
Confidence 4568999999999999999999999995 8999988754
No 134
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.26 E-value=6.6e-06 Score=75.17 Aligned_cols=38 Identities=32% Similarity=0.540 Sum_probs=34.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|+++++.|.++|+ +|++++|+..
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~ 50 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSED 50 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 4568999999999999999999999995 8999998754
No 135
>PRK12743 oxidoreductase; Provisional
Probab=98.25 E-value=9e-06 Score=74.52 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=31.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++||||+|.+|.++++.|++.|+ +|+++++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~ 36 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSD 36 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCC
Confidence 46899999999999999999999995 898886654
No 136
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.25 E-value=5.3e-06 Score=74.87 Aligned_cols=56 Identities=23% Similarity=0.232 Sum_probs=41.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc-CCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI-NHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~-~~~v~~i~gD 65 (366)
+++++++||||+|++|++++++|+++|+ +|++++|++..... ..+. ..+++.+++|
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D 62 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAAD 62 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEcc
Confidence 4468899999999999999999999995 89999987532211 1111 1456677777
No 137
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.22 E-value=3.4e-06 Score=77.22 Aligned_cols=38 Identities=29% Similarity=0.438 Sum_probs=34.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++|+||||+|++|.+++++|.++|+ +|++++|+..
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~ 42 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPE 42 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence 5678999999999999999999999994 8999998754
No 138
>PLN02253 xanthoxin dehydrogenase
Probab=98.21 E-value=3.8e-06 Score=78.04 Aligned_cols=38 Identities=34% Similarity=0.520 Sum_probs=33.8
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+++++++||||+|.||++++++|.+.|+ +|++++++.
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~ 52 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQD 52 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCH
Confidence 34568899999999999999999999995 899998864
No 139
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.21 E-value=7e-06 Score=73.97 Aligned_cols=32 Identities=34% Similarity=0.445 Sum_probs=29.5
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++|||++|++|+++++.|.++|+ +|++++++.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~-~v~~~~r~~ 32 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGA-KVIITYRSS 32 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 58999999999999999999995 899998875
No 140
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.20 E-value=1.2e-05 Score=72.78 Aligned_cols=37 Identities=32% Similarity=0.478 Sum_probs=32.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|++|+++++.|.++|+ .|+..+++.
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~ 40 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRV 40 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 4568999999999999999999999995 788877664
No 141
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.18 E-value=5.3e-06 Score=76.79 Aligned_cols=38 Identities=34% Similarity=0.446 Sum_probs=33.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|+++++.|.++|+ +|++.+|++.
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~ 40 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGA-RVAIGDLDEA 40 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHH
Confidence 4567999999999999999999999995 8999988653
No 142
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.17 E-value=1.8e-05 Score=72.59 Aligned_cols=37 Identities=27% Similarity=0.580 Sum_probs=31.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|.+|.++++.|++.|+ +|+.++++.
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~ 42 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNS 42 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCC
Confidence 3457999999999999999999999995 777776654
No 143
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.15 E-value=1.9e-05 Score=71.74 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=33.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|.+|.+++++|.+.|+ +|++++|+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~ 39 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSE 39 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCch
Confidence 4568999999999999999999999995 899999865
No 144
>PRK05717 oxidoreductase; Validated
Probab=98.15 E-value=2e-05 Score=72.12 Aligned_cols=39 Identities=33% Similarity=0.439 Sum_probs=34.3
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..++++++||||+|++|+++++.|.++|+ +|++++++..
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~ 45 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRE 45 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHH
Confidence 35578999999999999999999999995 8999987653
No 145
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.14 E-value=2.7e-05 Score=71.09 Aligned_cols=39 Identities=28% Similarity=0.502 Sum_probs=34.7
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+++++++||||+|.+|+++++.|.++|+ +|++++|+..
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~ 41 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAP 41 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChh
Confidence 35678999999999999999999999995 8999998763
No 146
>PRK08017 oxidoreductase; Provisional
Probab=98.13 E-value=5.8e-06 Score=75.52 Aligned_cols=35 Identities=37% Similarity=0.467 Sum_probs=31.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++++||||+|++|.++++.|.++|+ +|++++|+..
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~ 37 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPD 37 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 5899999999999999999999995 8999988753
No 147
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=98.11 E-value=2e-05 Score=72.03 Aligned_cols=39 Identities=26% Similarity=0.330 Sum_probs=34.9
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+++++++||||+|++|+++++.|.+.|+ +|++++|++.
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~ 46 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAA 46 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHH
Confidence 35678999999999999999999999995 8999998753
No 148
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.11 E-value=5.6e-05 Score=68.12 Aligned_cols=38 Identities=32% Similarity=0.426 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|+++++.|.++|+ +|+++++++.
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~-~v~~~~r~~~ 40 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGA-QVYGVDKQDK 40 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCC-EEEEEeCCcc
Confidence 4567999999999999999999999995 8999988753
No 149
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.10 E-value=4.8e-05 Score=68.42 Aligned_cols=38 Identities=34% Similarity=0.396 Sum_probs=33.8
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
.+++++||||+|++|+++++.|.++| ++|++++|+...
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G-~~v~~~~r~~~~ 39 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLG-HQVIGIARSAID 39 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCC-CEEEEEeCCccc
Confidence 45789999999999999999999999 489999987644
No 150
>PRK07985 oxidoreductase; Provisional
Probab=98.09 E-value=3.9e-05 Score=72.06 Aligned_cols=37 Identities=32% Similarity=0.463 Sum_probs=32.4
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|.||+++++.|.++|+ +|++.+++.
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~ 83 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPV 83 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCc
Confidence 4557999999999999999999999995 899887654
No 151
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.08 E-value=3.5e-05 Score=70.52 Aligned_cols=46 Identities=26% Similarity=0.468 Sum_probs=37.8
Q ss_pred CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|-.+.+..+++++|+||||+|++|.++++.|.++|+ +|++++++..
T Consensus 1 ~~~~~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~ 46 (255)
T PRK06113 1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINAD 46 (255)
T ss_pred CCCccccCcCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHH
Confidence 344444456679999999999999999999999995 8999987653
No 152
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.07 E-value=4.2e-05 Score=69.44 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=29.7
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL 44 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr 44 (366)
++++++||||+|++|+++++.|.+.|+ +|++...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~ 35 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCG 35 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcC
Confidence 457899999999999999999999995 7887543
No 153
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.06 E-value=3.1e-05 Score=70.94 Aligned_cols=37 Identities=32% Similarity=0.527 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCce-EEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQ-VRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~-V~~~dr~~ 46 (366)
+++++++||||+|.+|+.+++.|.++|+ + |++++|+.
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~-~~V~~~~r~~ 41 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGA-AGLVICGRNA 41 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCC-CeEEEEcCCH
Confidence 4568999999999999999999999996 6 99998875
No 154
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.05 E-value=3.6e-05 Score=71.06 Aligned_cols=35 Identities=23% Similarity=0.445 Sum_probs=31.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++++||||+|.+|.++++.|.++|+ +|++.+|+..
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~ 35 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEE 35 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 4799999999999999999999995 8999988754
No 155
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.04 E-value=2.2e-05 Score=70.79 Aligned_cols=38 Identities=26% Similarity=0.323 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++|+||||+|++|+++++.|.+.|+ +|++++|++.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~ 40 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNEN 40 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 3467999999999999999999999995 8999998753
No 156
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.03 E-value=4.4e-05 Score=70.06 Aligned_cols=37 Identities=32% Similarity=0.589 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|++|+++++.|+++|+ +|++++|+.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~ 40 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGA-NLILLDISP 40 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCH
Confidence 4568999999999999999999999995 899998875
No 157
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.03 E-value=6.7e-05 Score=68.61 Aligned_cols=39 Identities=36% Similarity=0.660 Sum_probs=34.8
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+++++++||||+|.+|+++++.|.+.|+ +|++++++.+
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~ 43 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTD 43 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcc
Confidence 35678999999999999999999999995 8999998754
No 158
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.02 E-value=2.1e-05 Score=72.29 Aligned_cols=35 Identities=34% Similarity=0.511 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++||||+|++|.++++.|++.|+ +|++++|++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~ 35 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNE 35 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 36899999999999999999999995 899999875
No 159
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.00 E-value=5.7e-05 Score=68.76 Aligned_cols=36 Identities=36% Similarity=0.482 Sum_probs=31.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
.++++++||||+|++|+++++.|.+.|+ +|+..+++
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~ 38 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQ 38 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCC
Confidence 3457899999999999999999999995 88876554
No 160
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.00 E-value=2.4e-05 Score=71.37 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=31.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|+|+||||+|++|.++++.|.+.|+ +|++++|++.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~ 35 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQE 35 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHH
Confidence 5799999999999999999999995 8999998753
No 161
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.00 E-value=3.6e-05 Score=70.33 Aligned_cols=38 Identities=29% Similarity=0.476 Sum_probs=34.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+.+++++||||+|.+|.+++++|.+.|+ +|++.+|+..
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~ 44 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAE 44 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHH
Confidence 4578999999999999999999999995 8999998753
No 162
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.99 E-value=5.3e-05 Score=68.61 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=32.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.++++++||||+|++|+++++.|.++|+ +|+++.++.
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~ 39 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGS 39 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCC
Confidence 3568999999999999999999999995 788876654
No 163
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=97.98 E-value=4.8e-05 Score=68.71 Aligned_cols=33 Identities=39% Similarity=0.643 Sum_probs=29.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
++++||||+|++|+++++.|+++|+ +|+++.++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~ 33 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGP 33 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4789999999999999999999995 89998873
No 164
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.98 E-value=1.5e-05 Score=72.75 Aligned_cols=35 Identities=34% Similarity=0.396 Sum_probs=31.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++||||+|.+|+++++.|++.|+ +|++++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~ 36 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIA 36 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 46899999999999999999999995 899998864
No 165
>PRK08643 acetoin reductase; Validated
Probab=97.98 E-value=2.6e-05 Score=71.31 Aligned_cols=36 Identities=33% Similarity=0.405 Sum_probs=32.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++||||+|++|.++++.|.++|+ +|++++|+..
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~ 37 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEE 37 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 46899999999999999999999995 8999998753
No 166
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.97 E-value=3.2e-05 Score=69.96 Aligned_cols=38 Identities=26% Similarity=0.486 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|.+++++|+++|. +|++++|++.
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~ 42 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEE 42 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 4457899999999999999999999995 8999998753
No 167
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=97.92 E-value=2.5e-05 Score=68.87 Aligned_cols=118 Identities=17% Similarity=0.056 Sum_probs=78.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc-------------------------
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL------------------------- 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD------------------------- 65 (366)
....++.|+.||.|+++|+...+.+ +.|-.+.++..+.. .+--...+..+++|
T Consensus 52 ~e~tlvlggnpfsgs~vlk~A~~vv-~svgilsen~~k~~-l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfg 129 (283)
T KOG4288|consen 52 VEWTLVLGGNPFSGSEVLKNATNVV-HSVGILSENENKQT-LSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFG 129 (283)
T ss_pred HHHHhhhcCCCcchHHHHHHHHhhc-eeeeEeecccCcch-hhCCCcccchhhccccccCcchhhhcCCcccHHHhcCcc
Confidence 3568999999999999999999999 68999988754221 11112334445555
Q ss_pred -------------------------------------------------------ccCCCCCceEEEEeCCccccCCCC-
Q 017760 66 -------------------------------------------------------RKNNRKCLYTCAVRPAAIYGPGEE- 89 (366)
Q Consensus 66 -------------------------------------------------------ks~~~~~l~~~ilRp~~iyGp~~~- 89 (366)
+-....+.+-+++||+.|||.+.-
T Consensus 130 n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R~v~ 209 (283)
T KOG4288|consen 130 NIILMDRINGTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLKKFRFRGIILRPGFIYGTRNVG 209 (283)
T ss_pred chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccchhhhccchHHHHHHHHhcCCCceeeccceeecccccC
Confidence 002334678999999999999542
Q ss_pred ---CC---HHHHHHHHHcCC-----CCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760 90 ---RH---LPRIVSLAKLGL-----VPFKIGEPSVKTDWIYVDNLVLALILASM 132 (366)
Q Consensus 90 ---~~---l~~~i~~~~~g~-----~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 132 (366)
.. +...+.++.++. .+...| .....++.++++|.+.+.|++
T Consensus 210 g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg--~l~~ppvnve~VA~aal~ai~ 261 (283)
T KOG4288|consen 210 GIKSPLHTVGEPLEMVLKFALKPLNKLPLLG--PLLAPPVNVESVALAALKAIE 261 (283)
T ss_pred cccccHHhhhhhHHHHHHhhhchhhcCcccc--cccCCCcCHHHHHHHHHHhcc
Confidence 11 112222222222 123343 366889999999999999997
No 168
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=97.91 E-value=4.9e-05 Score=79.52 Aligned_cols=38 Identities=32% Similarity=0.482 Sum_probs=34.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|+||+++++.|.++|+ +|++++++..
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~ 449 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLE 449 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHH
Confidence 4568999999999999999999999995 8999998753
No 169
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.90 E-value=0.00011 Score=67.35 Aligned_cols=56 Identities=25% Similarity=0.302 Sum_probs=41.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccc-c--cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHL-L--INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~-~--~~~~v~~i~gD 65 (366)
+++++++||||+|.+|.++++.|.+.|+ +|++++++........ . ...++.++++|
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 71 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVD 71 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcC
Confidence 4568999999999999999999999995 8999988732111111 1 12356777777
No 170
>PRK08589 short chain dehydrogenase; Validated
Probab=97.89 E-value=4.4e-05 Score=70.68 Aligned_cols=36 Identities=33% Similarity=0.510 Sum_probs=33.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
+++++++||||+|.+|.++++.|+++|+ +|++++|+
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~ 39 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA 39 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc
Confidence 5678999999999999999999999995 89999987
No 171
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.87 E-value=7.5e-05 Score=68.47 Aligned_cols=38 Identities=37% Similarity=0.545 Sum_probs=34.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|.++++.|.++|+ +|++++|+++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~ 42 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAA 42 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 4568999999999999999999999995 8999998754
No 172
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00012 Score=66.65 Aligned_cols=38 Identities=39% Similarity=0.564 Sum_probs=34.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|+++++.|.+.|+ +|++++|++.
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~ 42 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAA 42 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence 4568999999999999999999999995 8999998753
No 173
>PRK09242 tropinone reductase; Provisional
Probab=97.83 E-value=0.00014 Score=66.54 Aligned_cols=37 Identities=30% Similarity=0.446 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|.+|+++++.|.+.|+ +|++++|+.
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~ 43 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDA 43 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCH
Confidence 4678999999999999999999999995 899999875
No 174
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.82 E-value=0.00014 Score=67.02 Aligned_cols=38 Identities=26% Similarity=0.406 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|.+++++|+++|+ +|+++++++.
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~ 45 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQE 45 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHH
Confidence 4568999999999999999999999995 8999987753
No 175
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.82 E-value=6.6e-05 Score=69.22 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=34.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|.++++.|.+.|+ +|++.+|+..
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~ 43 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEE 43 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 4568999999999999999999999995 8999998753
No 176
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.81 E-value=0.00022 Score=65.22 Aligned_cols=37 Identities=32% Similarity=0.542 Sum_probs=32.4
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|.+|.++++.|.++|+ +|++.+++.
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~ 41 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSA 41 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 4568999999999999999999999995 898876654
No 177
>PRK08264 short chain dehydrogenase; Validated
Probab=97.77 E-value=4.8e-05 Score=68.66 Aligned_cols=54 Identities=33% Similarity=0.319 Sum_probs=43.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
+.+++++||||+|++|+++++.|+++|.++|++++|+...... ...++.++++|
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D 57 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLD 57 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEec
Confidence 4567999999999999999999999994389999987643221 33567888888
No 178
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.77 E-value=4.8e-05 Score=70.17 Aligned_cols=52 Identities=25% Similarity=0.193 Sum_probs=42.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
+++++++||||+|++|++++++|.++|+ +|++++|++.... ...+++++++|
T Consensus 2 ~~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~----~~~~~~~~~~D 53 (270)
T PRK06179 2 SNSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAA----PIPGVELLELD 53 (270)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcc----ccCCCeeEEee
Confidence 3457899999999999999999999995 8999998754321 12467888888
No 179
>PRK07069 short chain dehydrogenase; Validated
Probab=97.74 E-value=0.00017 Score=65.50 Aligned_cols=32 Identities=28% Similarity=0.503 Sum_probs=29.9
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
+++||||+|++|.++++.|.++|+ +|++++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~ 32 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDIN 32 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 489999999999999999999995 89999987
No 180
>PRK07023 short chain dehydrogenase; Provisional
Probab=97.74 E-value=5.2e-05 Score=68.80 Aligned_cols=53 Identities=17% Similarity=0.149 Sum_probs=40.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
||+++||||+|++|+++++.|.++|+ +|++++|+..... ......++.++++|
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~-~v~~~~r~~~~~~-~~~~~~~~~~~~~D 53 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGI-AVLGVARSRHPSL-AAAAGERLAEVELD 53 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCC-EEEEEecCcchhh-hhccCCeEEEEEec
Confidence 46899999999999999999999995 8999998764321 11123457777888
No 181
>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A ....
Probab=97.74 E-value=3.2e-05 Score=54.76 Aligned_cols=36 Identities=17% Similarity=0.227 Sum_probs=26.7
Q ss_pred eecHHHHHHhcCCCCCCChHHHHHHHHHHHHhcccc
Q 017760 228 YFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 263 (366)
Q Consensus 228 ~~d~~ka~~~LG~~p~~~~~e~l~~~v~~~~~~~~~ 263 (366)
+.|++||+++|||+|+++++++++++.+|++++..+
T Consensus 26 ~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np~G 61 (62)
T PF13950_consen 26 VADISKAREELGWKPKYSLEDMIRDAWNWQKKNPNG 61 (62)
T ss_dssp -B--HHHHHHC----SSSHHHHHHHHHHHHHHSTTT
T ss_pred hCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCcCC
Confidence 679999999999999999999999999999987653
No 182
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.00018 Score=68.92 Aligned_cols=38 Identities=29% Similarity=0.405 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++|+||||+|.+|.++++.|.++|+ +|++++|+..
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~ 43 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEE 43 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence 4568999999999999999999999995 8999998753
No 183
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00035 Score=64.09 Aligned_cols=38 Identities=34% Similarity=0.503 Sum_probs=33.0
Q ss_pred ccCCeEEEEcCCC-hhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLG-HVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtG-fiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+| -+|+++++.|.++|+ +|++.+++..
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~ 53 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHER 53 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence 4568999999998 599999999999995 8999987653
No 184
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.0004 Score=63.36 Aligned_cols=36 Identities=25% Similarity=0.399 Sum_probs=32.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++||||+|.+|+++++.|.++|+ +|++++|+..
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~ 36 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKE 36 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 36899999999999999999999995 8999998753
No 185
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.68 E-value=0.00042 Score=63.38 Aligned_cols=36 Identities=28% Similarity=0.388 Sum_probs=32.0
Q ss_pred ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
+++++|+||||+| .+|.++++.|.++|+ +|++++|+
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~-~vi~~~r~ 40 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGI-DIFFTYWS 40 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCC-cEEEEcCC
Confidence 3567899999996 699999999999995 89999887
No 186
>PRK07041 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00013 Score=65.57 Aligned_cols=50 Identities=24% Similarity=0.191 Sum_probs=36.2
Q ss_pred EEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-cCCCeEEEEcc
Q 017760 15 LVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-INHGVHCIQGL 65 (366)
Q Consensus 15 lITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-~~~~v~~i~gD 65 (366)
+||||+|++|++++++|+++|+ +|++++|++..... ... ...+++++.+|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D 53 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA-RVTIASRSRDRLAAAARALGGGAPVRTAALD 53 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCceEEEEcc
Confidence 5999999999999999999995 89999987432111 001 02356677777
No 187
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.64 E-value=4.5e-05 Score=69.21 Aligned_cols=54 Identities=19% Similarity=0.158 Sum_probs=40.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
|++++||||+|++|.++++.|.++|+ +|++++|++...........++.++++|
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D 54 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFD 54 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEee
Confidence 46899999999999999999999995 8999998753221111112357788888
No 188
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.64 E-value=4.5e-05 Score=69.19 Aligned_cols=54 Identities=13% Similarity=-0.024 Sum_probs=41.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cc---ccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HL---LINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~---~~~~~v~~i~gD 65 (366)
|++++||||+|++|.++++.|+++|+ +|++++|+++.... .. ....+++++++|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D 59 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELD 59 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecC
Confidence 47899999999999999999999995 89999998643211 11 012467888888
No 189
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.61 E-value=6.8e-05 Score=69.66 Aligned_cols=52 Identities=21% Similarity=0.183 Sum_probs=41.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
+++|+||||+|++|+++++.|.++|+ +|++++|++... ..+...+++++.+|
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~--~~l~~~~~~~~~~D 55 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDV--AALEAEGLEAFQLD 55 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH--HHHHHCCceEEEcc
Confidence 46899999999999999999999995 899999875432 22233467788888
No 190
>PRK06398 aldose dehydrogenase; Validated
Probab=97.61 E-value=0.00015 Score=66.65 Aligned_cols=49 Identities=29% Similarity=0.417 Sum_probs=41.4
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
+++++++||||+|.+|.++++.|.+.|+ +|++++|+.... ..++++++|
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~-------~~~~~~~~D 52 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSY-------NDVDYFKVD 52 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCcccc-------CceEEEEcc
Confidence 5668999999999999999999999995 899999876432 257788888
No 191
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.61 E-value=6.9e-05 Score=68.71 Aligned_cols=54 Identities=20% Similarity=0.166 Sum_probs=41.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD 65 (366)
|++++||||+|++|+++++.|+++|+ +|++++|+.+.... .......++++++|
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D 56 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALD 56 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEec
Confidence 47899999999999999999999995 89999987643211 11112467888888
No 192
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00028 Score=67.43 Aligned_cols=38 Identities=24% Similarity=0.404 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|+++++.|.++|+ +|++++|+..
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~ 42 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEE 42 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence 4568999999999999999999999995 8999998753
No 193
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.59 E-value=0.00033 Score=67.82 Aligned_cols=42 Identities=33% Similarity=0.523 Sum_probs=36.3
Q ss_pred cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
+.++++.+|+|+||||.+|+.+++.|+++| +.|+++.|+...
T Consensus 74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrg-f~vra~VRd~~~ 115 (411)
T KOG1203|consen 74 NNSKKPTTVLVVGATGKVGRRIVKILLKRG-FSVRALVRDEQK 115 (411)
T ss_pred CCCCCCCeEEEecCCCchhHHHHHHHHHCC-CeeeeeccChhh
Confidence 345667899999999999999999999999 589999887543
No 194
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.0001 Score=67.81 Aligned_cols=56 Identities=27% Similarity=0.382 Sum_probs=43.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD 65 (366)
+++++++||||+|.+|+++++.|.+.|+ +|++++|+...... ......++.++++|
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 60 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATD 60 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEec
Confidence 4568999999999999999999999995 89999997642111 11113457888888
No 195
>PRK06924 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00012 Score=66.58 Aligned_cols=54 Identities=17% Similarity=0.192 Sum_probs=40.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD 65 (366)
|++++||||+|++|++++++|.++|+ +|++++|++..... ......+++++++|
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D 56 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGT-HVISISRTENKELTKLAEQYNSNLTFHSLD 56 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCC-EEEEEeCCchHHHHHHHhccCCceEEEEec
Confidence 46899999999999999999999995 89999987632111 11113467788888
No 196
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.53 E-value=9.5e-05 Score=67.94 Aligned_cols=56 Identities=21% Similarity=0.232 Sum_probs=42.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-~~~~v~~i~gD 65 (366)
+++++++||||+|++|.++++.|+++|+ +|++++|++..... ..+ .+.++.++.+|
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D 61 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVAD 61 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEcc
Confidence 4567899999999999999999999995 89999987532211 011 12467788888
No 197
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.51 E-value=0.0011 Score=60.86 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=32.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+|.+|.++++.|.++|+ +|++..++.
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~ 41 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSD 41 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCC
Confidence 4568999999999999999999999995 788877754
No 198
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.51 E-value=8.6e-05 Score=68.70 Aligned_cols=52 Identities=23% Similarity=0.211 Sum_probs=40.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
|++++||||+|++|+++++.|.++|+ +|++++|+.... ..+...+++++.+|
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~--~~~~~~~~~~~~~D 52 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDV--EALAAAGFTAVQLD 52 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHH--HHHHHCCCeEEEee
Confidence 47899999999999999999999995 899999875322 22223456777887
No 199
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.51 E-value=0.00013 Score=66.26 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=35.5
Q ss_pred ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
...++++++||||+|++|.+++++|++.|+ +|++++|+..
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~ 47 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEE 47 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHH
Confidence 345678999999999999999999999995 8999998753
No 200
>PRK06196 oxidoreductase; Provisional
Probab=97.50 E-value=8.2e-05 Score=70.51 Aligned_cols=56 Identities=29% Similarity=0.301 Sum_probs=41.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
+++++|+||||+|++|.++++.|+++|+ +|++++|+..........-.+++++++|
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~D 79 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLD 79 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEcc
Confidence 4568999999999999999999999995 8999998754321100001247888888
No 201
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.49 E-value=0.00023 Score=65.23 Aligned_cols=58 Identities=29% Similarity=0.395 Sum_probs=44.2
Q ss_pred ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc---cCCCeEEEEcc
Q 017760 7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL---INHGVHCIQGL 65 (366)
Q Consensus 7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~---~~~~v~~i~gD 65 (366)
..+++++++|||||+-||..+++.|.++| ++|+++.|+...-.. .++ ..-.++++..|
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g-~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~D 64 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLARRG-YNLILVARREDKLEALAKELEDKTGVEVEVIPAD 64 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECc
Confidence 34677899999999999999999999999 589999998643211 111 12356788888
No 202
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00012 Score=67.47 Aligned_cols=56 Identities=18% Similarity=0.235 Sum_probs=42.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD 65 (366)
+++++++||||+|++|.++++.|+++|+ +|++++|++..... ..+ ...+++++.+|
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D 67 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAAD 67 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 5678999999999999999999999996 89999987532110 111 12457777888
No 203
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.47 E-value=0.00028 Score=64.27 Aligned_cols=34 Identities=35% Similarity=0.508 Sum_probs=31.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++++||||+|.+|.++++.|++.|. +|+++++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~ 34 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNE 34 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 4799999999999999999999995 899998864
No 204
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.46 E-value=0.00016 Score=66.53 Aligned_cols=56 Identities=27% Similarity=0.391 Sum_probs=42.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD 65 (366)
+++++++||||+|.||+++++.|++.|+ +|++++|+...... .......+..+++|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D 59 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGD 59 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEec
Confidence 4568999999999999999999999995 89999987532111 11112357778888
No 205
>PRK12742 oxidoreductase; Provisional
Probab=97.44 E-value=0.00015 Score=65.41 Aligned_cols=37 Identities=35% Similarity=0.493 Sum_probs=32.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++|+||||+|.||+++++.|.++|+ +|++.+++.
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~ 40 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGS 40 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCC
Confidence 4568999999999999999999999995 888876643
No 206
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.00017 Score=64.47 Aligned_cols=52 Identities=19% Similarity=0.142 Sum_probs=40.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
|++++||||+|.+|++++++|.+.|+ +|++++++.... ..+...+++++.+|
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~--~~~~~~~~~~~~~D 52 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAAL--AALQALGAEALALD 52 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHH--HHHHhccceEEEec
Confidence 46899999999999999999999995 899999875432 22223456778888
No 207
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.00024 Score=63.65 Aligned_cols=53 Identities=26% Similarity=0.171 Sum_probs=40.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
|++++||||+|++|+++++.|.++|+ +|++++|++...... ....++.+..+|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~-~~~~~~~~~~~D 53 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTAL-QALPGVHIEKLD 53 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHH-HhccccceEEcC
Confidence 46899999999999999999999995 899999986543211 112356677777
No 208
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.00016 Score=66.26 Aligned_cols=54 Identities=24% Similarity=0.258 Sum_probs=40.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccC-CCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLIN-HGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~-~~v~~i~gD 65 (366)
+++++||||+|.+|+++++.|.++|+ +|+++++++..... ..... .++.++++|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D 58 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAAD 58 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcC
Confidence 46899999999999999999999995 89999987532211 11111 157788888
No 209
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.00029 Score=64.61 Aligned_cols=56 Identities=20% Similarity=0.269 Sum_probs=41.6
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc---cCCCeEEEEcc
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL---INHGVHCIQGL 65 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~---~~~~v~~i~gD 65 (366)
..++|+||||+|.+|.+++++|+++|.++|++++|+++.... +.+ ...+++++++|
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D 68 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFD 68 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEec
Confidence 457899999999999999999999852389999988654110 111 12367888888
No 210
>PRK06484 short chain dehydrogenase; Validated
Probab=97.39 E-value=0.001 Score=67.48 Aligned_cols=36 Identities=19% Similarity=0.347 Sum_probs=32.9
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+++++||||+|.||.++++.|.++|+ +|++++|+.
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~ 303 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDA 303 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 468899999999999999999999995 899999864
No 211
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.00029 Score=64.42 Aligned_cols=38 Identities=29% Similarity=0.420 Sum_probs=34.2
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+++++++||||+|.+|+++++.|.++|+ +|++++|++
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~ 48 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSK 48 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCc
Confidence 35568999999999999999999999995 899999876
No 212
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=97.38 E-value=0.00044 Score=63.55 Aligned_cols=51 Identities=27% Similarity=0.423 Sum_probs=42.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
+++++++||||+|.+|.++++.|.++|. +|++.+++..... ..++.++++|
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~-----~~~~~~~~~D 57 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQ-----HENYQFVPTD 57 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCccccc-----cCceEEEEcc
Confidence 5568999999999999999999999995 8999998764321 2467788888
No 213
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0002 Score=64.85 Aligned_cols=55 Identities=15% Similarity=0.086 Sum_probs=41.5
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL 65 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD 65 (366)
+|++++||||+|.+|+.+++.|+++|. +|++++|++..... ... ...++.++.+|
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 63 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSID 63 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEcc
Confidence 357899999999999999999999995 89999987543211 001 12457788888
No 214
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.37 E-value=0.00022 Score=65.51 Aligned_cols=57 Identities=25% Similarity=0.348 Sum_probs=42.7
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD 65 (366)
.+++++++||||+|.+|+++++.|.+.|+ +|++++|++..... .......+.++++|
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 60 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGD 60 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEcc
Confidence 35678999999999999999999999995 89999987532211 11112457788888
No 215
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.34 E-value=0.0003 Score=63.45 Aligned_cols=53 Identities=26% Similarity=0.307 Sum_probs=41.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
+++++||||+|.+|+++++.|.+.|+ +|++++|++... .......+++++.+|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-~~~~~~~~~~~~~~D 54 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPA-IDGLRQAGAQCIQAD 54 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhH-HHHHHHcCCEEEEcC
Confidence 46899999999999999999999995 899999876432 122222346778888
No 216
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.00031 Score=63.49 Aligned_cols=39 Identities=26% Similarity=0.313 Sum_probs=34.9
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+++++++||||+|++|+++++.|.++|+ +|++++|+..
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~ 41 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQK 41 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChH
Confidence 35668999999999999999999999995 8999998864
No 217
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.32 E-value=0.00034 Score=63.98 Aligned_cols=63 Identities=19% Similarity=0.261 Sum_probs=44.9
Q ss_pred CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccccc--CCCeEEEEcc
Q 017760 1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI--NHGVHCIQGL 65 (366)
Q Consensus 1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~--~~~v~~i~gD 65 (366)
|.++.. .+++++++||||+|.||.+++++|.+.|+ +|++++++........+. ...+..+++|
T Consensus 1 ~~~~~~-~l~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D 65 (253)
T PRK08993 1 MILDAF-SLEGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTAD 65 (253)
T ss_pred Cccccc-CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECC
Confidence 444443 35678999999999999999999999995 899888764322111211 2356777888
No 218
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.00037 Score=64.59 Aligned_cols=38 Identities=29% Similarity=0.484 Sum_probs=34.4
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|++|.++++.|.++|+ +|++++|+.+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 5568999999999999999999999995 8999998764
No 219
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.00029 Score=64.36 Aligned_cols=56 Identities=21% Similarity=0.225 Sum_probs=41.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc--CCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI--NHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~--~~~v~~i~gD 65 (366)
+++++++||||+|.+|.++++.|.+.|+ +|++++|++..... .++. ..++.++.+|
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 63 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGD 63 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 4567999999999999999999999995 89999987543211 1111 2356777888
No 220
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.00033 Score=66.05 Aligned_cols=56 Identities=18% Similarity=0.095 Sum_probs=42.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD 65 (366)
+++++|+||||+|+||+++++.|.++|+ +|++++|+...... ..+ ....++++++|
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D 75 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELD 75 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECC
Confidence 4568999999999999999999999995 89999887533211 111 12457888888
No 221
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.28 E-value=0.00031 Score=64.19 Aligned_cols=56 Identities=18% Similarity=0.337 Sum_probs=42.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccc--cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL--INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~--~~~~v~~i~gD 65 (366)
+++++++||||+|.||++++++|.+.|+ +|++++++......... ...++.++++|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D 63 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITAD 63 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeC
Confidence 5678999999999999999999999995 89998876432111111 13457788888
No 222
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.00031 Score=64.14 Aligned_cols=56 Identities=25% Similarity=0.265 Sum_probs=42.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD 65 (366)
+++++|+||||+|++|+++++.|.+.|+ +|++++|++..... ..+ ...++..+.+|
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D 66 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEec
Confidence 5578999999999999999999999995 89999987543111 111 12356778888
No 223
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.00053 Score=64.35 Aligned_cols=56 Identities=25% Similarity=0.310 Sum_probs=41.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD 65 (366)
+.+++++||||+|.+|.++++.|.++|+ +|++++|+...... ..+ ...++.++++|
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~D 97 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCD 97 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 4568899999999999999999999995 89999998532111 111 12346777888
No 224
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.00033 Score=63.60 Aligned_cols=54 Identities=19% Similarity=0.179 Sum_probs=40.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD 65 (366)
+++++||||+|.+|++++++|.+.|. +|++.+|++..... ..+ ....++++++|
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D 61 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALD 61 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcC
Confidence 46899999999999999999999995 89999987533211 000 12357788888
No 225
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.22 E-value=0.00042 Score=64.21 Aligned_cols=57 Identities=26% Similarity=0.395 Sum_probs=42.7
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc--CCCeEEEEcc
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI--NHGVHCIQGL 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~--~~~v~~i~gD 65 (366)
.+++++++||||+|.+|+++++.|.+.|+ +|++++|+...... ..+. ..++.++++|
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 67 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECC
Confidence 35678999999999999999999999995 89999987532211 1111 2357788888
No 226
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.17 E-value=0.0038 Score=56.09 Aligned_cols=38 Identities=32% Similarity=0.437 Sum_probs=34.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+.+.++|||||+-+|.+.++.|.+.|+ +|++..|+..
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~d 41 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGA-KVVLAARREE 41 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHH
Confidence 3457899999999999999999999995 8999999864
No 227
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.14 E-value=0.00068 Score=64.40 Aligned_cols=56 Identities=20% Similarity=0.068 Sum_probs=41.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD 65 (366)
+++++++||||+|+||.++++.|+++|+ +|++++|+...... ..+ ....+.++++|
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D 63 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHID 63 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEec
Confidence 3568899999999999999999999994 89999987532211 111 12357788888
No 228
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.12 E-value=0.00063 Score=61.73 Aligned_cols=54 Identities=20% Similarity=0.188 Sum_probs=38.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD 65 (366)
+++|+||||+|++|+++++.|.++|+ +|++.+++++.... ..+ ...++..+++|
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 60 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGD 60 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEec
Confidence 46899999999999999999999995 78776554322111 111 12357778887
No 229
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.00072 Score=61.54 Aligned_cols=56 Identities=21% Similarity=0.268 Sum_probs=41.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD 65 (366)
+++++++||||+|++|.++++.|.+.|+ +|++++++...... ..+ ....+.++++|
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 65 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcC
Confidence 5568999999999999999999999995 89999987532110 111 12345667777
No 230
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.00058 Score=62.33 Aligned_cols=56 Identities=23% Similarity=0.215 Sum_probs=41.8
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD 65 (366)
+++++++||||+|.+|.++++.|++.|+ +|++.+|+...... ..+ ...++..+.+|
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D 66 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 4578999999999999999999999995 89999887532111 111 12356777888
No 231
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.00086 Score=61.74 Aligned_cols=56 Identities=18% Similarity=0.190 Sum_probs=41.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc--CCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI--NHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~--~~~v~~i~gD 65 (366)
+++++++||||+|.+|.+++++|.++|+ +|++++|++..... ..+. ..++.++.+|
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 66 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSAD 66 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECC
Confidence 4568999999999999999999999994 89999987543211 1111 2345677777
No 232
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.00067 Score=64.30 Aligned_cols=57 Identities=19% Similarity=0.110 Sum_probs=43.2
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD 65 (366)
.+++++++||||+|.||.++++.|.+.|+ +|++.+|+...... ..+ ....+.++++|
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~D 73 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALD 73 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEec
Confidence 35678999999999999999999999995 89999987543211 111 12357888998
No 233
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.04 E-value=0.001 Score=62.84 Aligned_cols=57 Identities=28% Similarity=0.317 Sum_probs=42.5
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD 65 (366)
.+++++++||||+|.||.+++++|.++|+ +|++.+++...... ..+ ....+..+++|
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~D 70 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGD 70 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCC
Confidence 35678999999999999999999999995 89999876432211 111 12457788888
No 234
>PRK09620 hypothetical protein; Provisional
Probab=97.02 E-value=0.0018 Score=58.58 Aligned_cols=35 Identities=34% Similarity=0.546 Sum_probs=31.6
Q ss_pred cCCeEEEEcCC----------------ChhHHHHHHHHHHcCCceEEEEecC
Q 017760 10 EGKTFLVTGGL----------------GHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 10 ~~~~VlITGgt----------------GfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
.+++|+||+|. ||+|++++++|+++|+ +|+.++..
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga-~V~li~g~ 52 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGA-HVIYLHGY 52 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 57899999986 9999999999999995 89999864
No 235
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.97 E-value=0.001 Score=61.01 Aligned_cols=57 Identities=18% Similarity=0.233 Sum_probs=41.3
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc---cCCCeEEEEcc
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL---INHGVHCIQGL 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~---~~~~v~~i~gD 65 (366)
.+++++++||||++.||.++++.|.+.|+ +|++.+++...... ..+ ...++.++.+|
T Consensus 5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 67 (260)
T PRK08416 5 EMKGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLN 67 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcC
Confidence 35678999999999999999999999995 89887665322110 111 12357788888
No 236
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.93 E-value=0.0036 Score=62.38 Aligned_cols=37 Identities=38% Similarity=0.580 Sum_probs=32.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.++++++||||+|.+|..+++.|.++|+ +|++++++.
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~ 244 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPA 244 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 3468999999999999999999999995 899998854
No 237
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.92 E-value=0.0013 Score=64.58 Aligned_cols=38 Identities=42% Similarity=0.620 Sum_probs=33.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|+++++.|.++|. +|+++++++.
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~ 213 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSD 213 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 4568999999999999999999999995 8999998753
No 238
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=96.90 E-value=0.0023 Score=57.57 Aligned_cols=50 Identities=22% Similarity=0.255 Sum_probs=37.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
|+|+||||+|+||++++++|.++|. ..|...+++.... ....++.++++|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~~~~~~~~~~D 51 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQHDNVQWHALD 51 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----cccCceEEEEec
Confidence 4899999999999999999999852 2566666544321 223567888888
No 239
>PRK08309 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.00099 Score=57.75 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=29.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
|+++|||||||+|. +++.|.+.|+ +|++.+|++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~-~V~v~~R~~ 33 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGF-HVSVIARRE 33 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcC-EEEEEECCH
Confidence 47999999998876 9999999995 899998864
No 240
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0015 Score=59.51 Aligned_cols=36 Identities=33% Similarity=0.409 Sum_probs=31.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
+++++++||||+|++|.++++.|.+.|+ +|++.+++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~ 37 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGN 37 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCC
Confidence 4568999999999999999999999995 88887543
No 241
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=96.82 E-value=0.0031 Score=53.75 Aligned_cols=44 Identities=20% Similarity=0.130 Sum_probs=37.0
Q ss_pred ccccccCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCC
Q 017760 5 ENEGIEGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNS 48 (366)
Q Consensus 5 ~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~ 48 (366)
|+-.|+++..+|.||||-.|+-+++++++.+ +.+|+++.|+.+.
T Consensus 12 EDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~ 56 (238)
T KOG4039|consen 12 EDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP 56 (238)
T ss_pred HHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC
Confidence 3335778999999999999999999999987 4579999998543
No 242
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=96.81 E-value=0.0031 Score=53.22 Aligned_cols=36 Identities=36% Similarity=0.529 Sum_probs=30.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++++||||+|++|.++++.|.++|.+.|+.+++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence 478999999999999999999998546888877654
No 243
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.79 E-value=0.0012 Score=57.63 Aligned_cols=57 Identities=23% Similarity=0.217 Sum_probs=43.0
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
.+.+.+||||||+.-||..|++++.+.|. +|++..|+...-.......+++....+|
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~D 58 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCD 58 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeec
Confidence 35678999999999999999999999994 9999999864322222223556666666
No 244
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0019 Score=59.26 Aligned_cols=56 Identities=25% Similarity=0.223 Sum_probs=41.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc----CCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI----NHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~----~~~v~~i~gD 65 (366)
+++++++||||+|.+|.++++.|.++|+ +|++++|++..... ..+. ..++..+.+|
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D 67 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCD 67 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEec
Confidence 4568999999999999999999999995 89999997643211 1111 1256677777
No 245
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.71 E-value=0.0023 Score=58.46 Aligned_cols=56 Identities=14% Similarity=0.089 Sum_probs=41.6
Q ss_pred ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCCCCcc-cccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRTNSPW-SHLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~~~~~-~~~~~~~~v~~i~gD 65 (366)
+++++++||||+ +-||.+++++|.+.|+ +|++.+|+..... ..+.....+..+++|
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~D 63 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECD 63 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCC
Confidence 567899999999 7999999999999995 8999988632111 112223457788888
No 246
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0029 Score=59.40 Aligned_cols=38 Identities=34% Similarity=0.552 Sum_probs=34.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|.++++.|.+.|+ +|++++|+..
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 44 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEA 44 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 5678999999999999999999999995 8999998754
No 247
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.0024 Score=58.41 Aligned_cols=56 Identities=18% Similarity=0.172 Sum_probs=42.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc---CCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI---NHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~---~~~v~~i~gD 65 (366)
+++++++||||+|.+|.++++.|.+.|+ +|++++|++..... ..+. ..++.++.+|
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D 65 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALD 65 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEec
Confidence 4568999999999999999999999996 89999987542211 1111 2356777887
No 248
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.65 E-value=0.002 Score=54.52 Aligned_cols=73 Identities=25% Similarity=0.160 Sum_probs=49.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccc------cCCCeEEEEccc------------c-CCCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL------INHGVHCIQGLR------------K-NNRKC 72 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~------~~~~v~~i~gDk------------s-~~~~~ 72 (366)
++++||||+|-+|..++++|+++|.++|++++|+++.+....+ ...++.++++|- . .....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999999999999975678888887111111111 136778888880 0 23345
Q ss_pred ceEEEEeCCccc
Q 017760 73 LYTCAVRPAAIY 84 (366)
Q Consensus 73 l~~~ilRp~~iy 84 (366)
+++.+.-.+...
T Consensus 81 ld~li~~ag~~~ 92 (167)
T PF00106_consen 81 LDILINNAGIFS 92 (167)
T ss_dssp ESEEEEECSCTT
T ss_pred cccccccccccc
Confidence 666666665544
No 249
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.0027 Score=57.01 Aligned_cols=52 Identities=21% Similarity=0.185 Sum_probs=38.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
|+++||||+|.+|+++++.|.++|+ +|++++|+...... .....+++.+++|
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~-~~~~~~~~~~~~D 52 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEV-AAKELDVDAIVCD 52 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHH-HHHhccCcEEecC
Confidence 3799999999999999999999995 89999887532110 0011245677888
No 250
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.63 E-value=0.0041 Score=57.48 Aligned_cols=57 Identities=21% Similarity=0.374 Sum_probs=44.4
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccC-CCeEEEEcc
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLIN-HGVHCIQGL 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~-~~v~~i~gD 65 (366)
..+++.||||||++-+|+.++.+++++|. ++.+.|+++..... +.... ..++...+|
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cd 94 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCD 94 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEec
Confidence 46688999999999999999999999996 89999998765432 11111 257788888
No 251
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.62 E-value=0.0021 Score=57.97 Aligned_cols=51 Identities=20% Similarity=0.146 Sum_probs=37.9
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccc--cCCCeEEEEcc
Q 017760 14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLL--INHGVHCIQGL 65 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~--~~~~v~~i~gD 65 (366)
|+||||+|++|.++++.|.++|+ +|++++++...... ..+ .+.++.++++|
T Consensus 1 vlItGas~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D 56 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGF-EICVHYHSGRSDAESVVSAIQAQGGNARLLQFD 56 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEcc
Confidence 58999999999999999999995 89998876432211 111 13457888888
No 252
>PRK05855 short chain dehydrogenase; Validated
Probab=96.55 E-value=0.0026 Score=65.03 Aligned_cols=57 Identities=26% Similarity=0.327 Sum_probs=43.1
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD 65 (366)
.+..++++||||+|+||++++++|.++|+ +|++++|+...... ... ...++.++.+|
T Consensus 312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 372 (582)
T PRK05855 312 PFSGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVD 372 (582)
T ss_pred cCCCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcC
Confidence 35568999999999999999999999995 89999987543211 111 12457888888
No 253
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.52 E-value=0.0032 Score=57.64 Aligned_cols=53 Identities=21% Similarity=0.178 Sum_probs=39.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc-CCCeEEEEcc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI-NHGVHCIQGL 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~-~~~v~~i~gD 65 (366)
|+++||||+|.+|+++++.|.++|+ +|++++|++..... ..+. ..++.++++|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D 56 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKAD 56 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcC
Confidence 4899999999999999999999995 89999987532111 1111 1356778888
No 254
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.52 E-value=0.0039 Score=57.37 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=30.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++++||||+|.||.++++.|.++|+ +|++++++.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~-~V~~~~~~~ 35 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGY-RVVLHYHRS 35 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCC-eEEEEcCCc
Confidence 4789999999999999999999995 899887654
No 255
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.51 E-value=0.004 Score=59.24 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=33.7
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.++.++||||||.||.+++++|.++|+ +|++++|++.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~ 88 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPD 88 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHH
Confidence 468999999999999999999999995 8999999864
No 256
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.0036 Score=57.82 Aligned_cols=34 Identities=32% Similarity=0.434 Sum_probs=31.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++++||||+|.+|.++++.|.++|+ +|++++++.
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~ 34 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDA 34 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 4799999999999999999999995 899998865
No 257
>PRK06720 hypothetical protein; Provisional
Probab=96.45 E-value=0.0061 Score=52.41 Aligned_cols=38 Identities=34% Similarity=0.503 Sum_probs=33.8
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+|.+|.++++.|.+.|+ +|.+.+++.+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~ 51 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQE 51 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHH
Confidence 4568899999999999999999999995 8999998753
No 258
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.0033 Score=65.63 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=42.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD 65 (366)
+++++++||||+|.+|.++++.|.++|+ +|++++|++..... ..+ ...++.++++|
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 428 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCD 428 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEec
Confidence 4568999999999999999999999995 89999987543211 111 12457788888
No 259
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.0061 Score=56.92 Aligned_cols=37 Identities=32% Similarity=0.571 Sum_probs=33.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||++.||.++++.|.+.|+ +|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 4568999999999999999999999995 899998765
No 260
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.33 E-value=0.0048 Score=56.53 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=41.1
Q ss_pred ccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecCCCCcccccc---cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL---INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~---~~~~v~~i~gD 65 (366)
+++++++|||| ++-||.++++.|.+.|+ +|++.+|+......... ....+.++++|
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D 65 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELD 65 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCC
Confidence 45689999999 89999999999999995 89999876422211111 12356778888
No 261
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.0078 Score=56.86 Aligned_cols=37 Identities=32% Similarity=0.416 Sum_probs=33.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||++-||.++++.|++.|+ +|++.+|+.
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~ 42 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRST 42 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeccc
Confidence 4578999999999999999999999996 899999874
No 262
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.20 E-value=0.0065 Score=56.29 Aligned_cols=78 Identities=23% Similarity=0.206 Sum_probs=52.9
Q ss_pred cccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----ccccCC-CeEEEEcc----cc--------
Q 017760 6 NEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HLLINH-GVHCIQGL----RK-------- 67 (366)
Q Consensus 6 ~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~~~~~-~v~~i~gD----ks-------- 67 (366)
++.+.++.|+|||||.-||.+++.+|.++|. +++.+.++...... .+..+. ++..+++| ++
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~ 85 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA 85 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence 4557789999999999999999999999996 67777666433211 112223 47888888 11
Q ss_pred -CCCCCceEEEEeCCccc
Q 017760 68 -NNRKCLYTCAVRPAAIY 84 (366)
Q Consensus 68 -~~~~~l~~~ilRp~~iy 84 (366)
..-+++++.+=.-|...
T Consensus 86 ~~~fg~vDvLVNNAG~~~ 103 (282)
T KOG1205|consen 86 IRHFGRVDVLVNNAGISL 103 (282)
T ss_pred HHhcCCCCEEEecCcccc
Confidence 34456666666655544
No 263
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.18 E-value=0.018 Score=50.02 Aligned_cols=40 Identities=33% Similarity=0.495 Sum_probs=34.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP 49 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~ 49 (366)
.+.+..+||||+.-||++++..|.+.|+ +|...|++....
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Ga-rv~v~dl~~~~A 51 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGA-RVAVADLDSAAA 51 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCc-EEEEeecchhhH
Confidence 3456789999999999999999999996 899999886543
No 264
>PRK14982 acyl-ACP reductase; Provisional
Probab=96.17 E-value=0.007 Score=57.75 Aligned_cols=38 Identities=26% Similarity=0.414 Sum_probs=32.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~ 46 (366)
.++++|+||||+|++|+.+++.|.++ |.++++.++|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~ 191 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQ 191 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCH
Confidence 56789999999999999999999864 555899888764
No 265
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=96.07 E-value=0.014 Score=52.67 Aligned_cols=28 Identities=18% Similarity=0.355 Sum_probs=24.6
Q ss_pred cCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 18 GGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 18 GgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+||++|+++++.|+++|+ +|++++++.
T Consensus 23 ~SSG~iG~aLA~~L~~~G~-~V~li~r~~ 50 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGH-EVTLVTTKT 50 (229)
T ss_pred ccchHHHHHHHHHHHhCCC-EEEEEECcc
Confidence 4589999999999999995 999998754
No 266
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.05 E-value=0.015 Score=53.24 Aligned_cols=56 Identities=18% Similarity=0.111 Sum_probs=40.5
Q ss_pred ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCCCCc-ccccc----cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRTNSP-WSHLL----INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~~~~-~~~~~----~~~~v~~i~gD 65 (366)
+++++++||||+ +-||.++++.|.+.|+ +|++.+|+.... ....+ ...++..+++|
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D 67 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCD 67 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecC
Confidence 456899999997 8999999999999996 899988753211 11111 12456778888
No 267
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.01 E-value=0.01 Score=54.70 Aligned_cols=56 Identities=16% Similarity=0.125 Sum_probs=39.8
Q ss_pred ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCCCCc-cccccc--CCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRTNSP-WSHLLI--NHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~~~~-~~~~~~--~~~v~~i~gD 65 (366)
+++++++||||++ -||.++++.|.+.|+ +|++.+++.... ...++. .+.+..+.+|
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~D 64 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCD 64 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecC
Confidence 5668999999985 899999999999995 899888763111 111111 1345677888
No 268
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.011 Score=53.17 Aligned_cols=38 Identities=21% Similarity=0.316 Sum_probs=34.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||++-+|.++++.|.++|. +|++.+|+..
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~ 40 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQS 40 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHH
Confidence 4568999999999999999999999995 8999988764
No 269
>PRK06484 short chain dehydrogenase; Validated
Probab=95.92 E-value=0.0099 Score=60.29 Aligned_cols=55 Identities=25% Similarity=0.357 Sum_probs=41.5
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL 65 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD 65 (366)
++++++||||++.||.++++.|.++|+ +|++++|+...... ......++.++++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 59 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMD 59 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEec
Confidence 468999999999999999999999995 89999987543211 11112456778888
No 270
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.013 Score=51.40 Aligned_cols=33 Identities=30% Similarity=0.442 Sum_probs=29.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
|+++||||+|.+|.++++.|.++ + +|++++|++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~ 33 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-H-EVITAGRSS 33 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCC
Confidence 47999999999999999999988 5 899998864
No 271
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.84 E-value=0.013 Score=54.19 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=32.7
Q ss_pred ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||++ -||.++++.|.+.|+ +|++.+|+.
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~ 43 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGE 43 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCch
Confidence 5568899999997 899999999999995 899988764
No 272
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.78 E-value=0.019 Score=52.64 Aligned_cols=38 Identities=21% Similarity=0.188 Sum_probs=33.2
Q ss_pred ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++++++||||+ +-||.++++.|++.|+ +|++.+|+..
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~ 47 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDK 47 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChh
Confidence 567899999998 5899999999999995 8999988753
No 273
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.72 E-value=0.018 Score=52.67 Aligned_cols=35 Identities=31% Similarity=0.444 Sum_probs=30.6
Q ss_pred ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEec
Q 017760 9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDL 44 (366)
Q Consensus 9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr 44 (366)
.++++++||||+| .+|.+++++|+++|+ +|++.++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~~ 40 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTYW 40 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEec
Confidence 4568999999995 799999999999995 8988764
No 274
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.68 E-value=0.018 Score=53.38 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=32.6
Q ss_pred ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+ +-||.++++.|.+.|+ +|++.+|+.
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~ 41 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNE 41 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCH
Confidence 456899999997 7899999999999996 899998874
No 275
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.66 E-value=0.018 Score=54.58 Aligned_cols=71 Identities=14% Similarity=0.011 Sum_probs=48.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCccc--ccc--cCCCeEEEEcc------------cc-CCCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL------------RK-NNRKC 72 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD------------ks-~~~~~ 72 (366)
+++++||||++.||.++++.|.++| + +|++++|+...... ..+ ....+.++.+| +. ....+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5689999999999999999999999 6 89999887532210 111 12356778888 00 12345
Q ss_pred ceEEEEeCCc
Q 017760 73 LYTCAVRPAA 82 (366)
Q Consensus 73 l~~~ilRp~~ 82 (366)
++..+...+.
T Consensus 82 iD~lI~nAG~ 91 (314)
T TIGR01289 82 LDALVCNAAV 91 (314)
T ss_pred CCEEEECCCc
Confidence 7777766553
No 276
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.61 E-value=0.019 Score=52.66 Aligned_cols=37 Identities=19% Similarity=0.228 Sum_probs=31.7
Q ss_pred cccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecC
Q 017760 8 GIEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 8 ~~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
.+++++++|||| ++-||.++++.|.+.|+ +|++.+++
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~ 41 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVV 41 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCc
Confidence 356789999997 67999999999999996 89888765
No 277
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=95.59 E-value=0.025 Score=49.06 Aligned_cols=33 Identities=39% Similarity=0.638 Sum_probs=30.2
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
+++||||+|-+|..+++.|.+++..+|+.+.|+
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 689999999999999999999986689999988
No 278
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=95.58 E-value=0.022 Score=51.62 Aligned_cols=40 Identities=35% Similarity=0.511 Sum_probs=34.1
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
.+.+++++||||++-+|.++++.|.+.|. +|++..++...
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~-~v~~~~~~~~~ 41 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGA-RVVVAARRSEE 41 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEcCCCch
Confidence 35678999999999999999999999995 88888777543
No 279
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.53 E-value=0.031 Score=52.93 Aligned_cols=77 Identities=23% Similarity=0.200 Sum_probs=54.8
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--c----cccCCCeEEEEcc----cc---------C
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--H----LLINHGVHCIQGL----RK---------N 68 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~----~~~~~~v~~i~gD----ks---------~ 68 (366)
...+++++||||+.-||...++.|.++|. +|+...|+...... . ......+.++++| ++ .
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~ 110 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGA-HVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK 110 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 34568999999999999999999999996 89999998632211 1 1224578889999 11 3
Q ss_pred CCCCceEEEEeCCccccC
Q 017760 69 NRKCLYTCAVRPAAIYGP 86 (366)
Q Consensus 69 ~~~~l~~~ilRp~~iyGp 86 (366)
....++..|... +|+.+
T Consensus 111 ~~~~ldvLInNA-GV~~~ 127 (314)
T KOG1208|consen 111 KEGPLDVLINNA-GVMAP 127 (314)
T ss_pred cCCCccEEEeCc-ccccC
Confidence 455666666654 45444
No 280
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=95.45 E-value=0.016 Score=56.17 Aligned_cols=54 Identities=28% Similarity=0.252 Sum_probs=42.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD 65 (366)
|++|+|.|+ |++|+.++..|.++|-.+|++.||+..+... .....++++.++.|
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD 55 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVD 55 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEec
Confidence 578999988 9999999999999985599999999654322 22223578888888
No 281
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.40 E-value=0.027 Score=53.65 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=30.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCC------ceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGA------YQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~------~~V~~~dr~~~ 47 (366)
.||+|||++|++|++++..|...+. .+|+++|++++
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~ 44 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA 44 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc
Confidence 5799999999999999999998552 28999999764
No 282
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=95.34 E-value=0.027 Score=50.14 Aligned_cols=57 Identities=30% Similarity=0.292 Sum_probs=40.8
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccccccc----CCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI----NHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~----~~~v~~i~gD 65 (366)
..++++++|||.|-||..++++|+++|...+.+.++.+......++. ...+-|++.|
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~D 63 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCD 63 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEec
Confidence 35789999999999999999999999974444444444322222221 3578889999
No 283
>PRK05599 hypothetical protein; Provisional
Probab=95.33 E-value=0.021 Score=51.85 Aligned_cols=52 Identities=19% Similarity=0.212 Sum_probs=38.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc---CCCeEEEEcc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI---NHGVHCIQGL 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~---~~~v~~i~gD 65 (366)
|+++||||++-+|.+++++|. +| ++|++.+|+...... .++. ...+.++++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~D 57 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HG-EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFD 57 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcc
Confidence 579999999999999999999 58 489999987543211 1111 1246788888
No 284
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.32 E-value=0.03 Score=51.33 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=31.7
Q ss_pred ccCCeEEEEcCCC--hhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGLG--HVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtG--fiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
+++++++||||++ -||.++++.|.+.|+ +|++.+++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~ 43 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQS 43 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCc
Confidence 4568899999997 799999999999995 89988876
No 285
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=95.29 E-value=0.027 Score=55.21 Aligned_cols=38 Identities=37% Similarity=0.535 Sum_probs=34.2
Q ss_pred cccCCeEEEEcC----------------CChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGG----------------LGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGg----------------tGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+++++|+|||| ||.+|.+++++|.++|+ +|++++++.
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga-~V~~v~~~~ 238 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGA-DVTLVSGPV 238 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCC-EEEEeCCCc
Confidence 357789999999 99999999999999996 899998765
No 286
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.26 E-value=0.032 Score=48.88 Aligned_cols=37 Identities=35% Similarity=0.495 Sum_probs=33.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.++++++|+||+|.+|+.+++.|.+.| ++|++++|+.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g-~~V~l~~R~~ 62 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREG-ARVVLVGRDL 62 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCH
Confidence 456899999999999999999999999 5899998774
No 287
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=95.02 E-value=0.036 Score=49.67 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=31.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|+|.|+||+|.+|+.++..|.+.| ++|...+|++.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G-~~V~v~~r~~~ 35 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAG-NKIIIGSRDLE 35 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-CEEEEEEcCHH
Confidence 479999999999999999999999 69999988653
No 288
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.91 E-value=0.046 Score=50.22 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=31.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
|+|+|+||||. |+.|++.|.+.| ++|++..+....
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g-~~v~~s~~t~~~ 35 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQG-IEILVTVTTSEG 35 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCC-CeEEEEEccCCc
Confidence 58999999999 999999999999 599999887653
No 289
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.87 E-value=0.051 Score=49.80 Aligned_cols=37 Identities=27% Similarity=0.305 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++||||+ +-||.+++++|.+.|+ +|++.+++.
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~ 42 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPD 42 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCc
Confidence 456889999986 7999999999999995 898887654
No 290
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.83 E-value=0.052 Score=47.84 Aligned_cols=53 Identities=30% Similarity=0.305 Sum_probs=39.3
Q ss_pred cCCeEEEEcC-CChhHHHHHHHHHHcCCceEEEEecCCCCccccccc-CCCeEEEEcc
Q 017760 10 EGKTFLVTGG-LGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLI-NHGVHCIQGL 65 (366)
Q Consensus 10 ~~~~VlITGg-tGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~-~~~v~~i~gD 65 (366)
..++|+|||+ +|-||.+|++++.+.|+ +|.+..|+...- .++. .-++...+.|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M--~~L~~~~gl~~~kLD 60 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPM--AQLAIQFGLKPYKLD 60 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchH--hhHHHhhCCeeEEec
Confidence 3478999885 59999999999999995 999998875331 2222 3456666666
No 291
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.82 E-value=0.047 Score=50.09 Aligned_cols=36 Identities=22% Similarity=0.295 Sum_probs=30.9
Q ss_pred ccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
+++++++|||| ++-||.++++.|.+.|+ +|++.++.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~ 41 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVG 41 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccc
Confidence 45689999996 67999999999999995 89888654
No 292
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.78 E-value=0.046 Score=50.60 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=31.6
Q ss_pred ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
+++++++||||+ +-||.++++.|.+.|+ +|++.+|+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~ 45 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQG 45 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCc
Confidence 456899999997 7999999999999996 89888765
No 293
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.044 Score=50.73 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=36.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--cccc--CCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLI--NHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~--~~~v~~i~gD 65 (366)
+++++|||+ |.||+++++.|. .|. +|++++|+...... ..+. ...+.++++|
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D 57 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVD 57 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEee
Confidence 357899997 689999999996 794 89999987532211 1111 2356778888
No 294
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=94.59 E-value=0.051 Score=52.39 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=30.3
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++++|.|+||||++|+.|++.|.+....+++.+.++.
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 4589999999999999999999987644788874443
No 295
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=94.49 E-value=0.082 Score=43.95 Aligned_cols=36 Identities=28% Similarity=0.505 Sum_probs=31.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~ 47 (366)
|||.|+|++|.+|++++..|...+. .+++.+|+++.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~ 37 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINED 37 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcc
Confidence 5899999999999999999999873 58999999854
No 296
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.47 E-value=0.086 Score=42.47 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=26.3
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
||.|.|+||++|+.|++.|.+.-..++..+..+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~ 34 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSS 34 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEEST
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeec
Confidence 6899999999999999999996533555544443
No 297
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.46 E-value=0.088 Score=50.43 Aligned_cols=37 Identities=24% Similarity=0.301 Sum_probs=29.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCC--ceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGA--YQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~--~~V~~~dr~~~ 47 (366)
|++|+|.||||++|+.|++.|.+++. .+++.+.+...
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS 39 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence 46899999999999999999999762 24577766543
No 298
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=94.17 E-value=0.071 Score=48.61 Aligned_cols=52 Identities=17% Similarity=0.112 Sum_probs=38.1
Q ss_pred eEEEEcCCChhHHHHHHHHHH----cCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc
Q 017760 13 TFLVTGGLGHVGSALCLELVR----RGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL 65 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~----~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD 65 (366)
.++||||+|.||.+++++|.+ .|+ +|++++|+...... ..+ ....+.++.+|
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~D 63 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGS-VLVLSARNDEALRQLKAEIGAERSGLRVVRVSLD 63 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCc-EEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEec
Confidence 589999999999999999997 685 89999987543211 111 12357778888
No 299
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.17 E-value=0.082 Score=49.05 Aligned_cols=78 Identities=23% Similarity=0.163 Sum_probs=54.9
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc-----cCCCeEEEEcccc-------------
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL-----INHGVHCIQGLRK------------- 67 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~-----~~~~v~~i~gDks------------- 67 (366)
...++.++||||+.-||+++|++|.+.|. +|++.+|+...... ... ....+..+.+|-+
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999995 89999998754221 110 1245777888811
Q ss_pred CC-CCCceEEEEeCCccccC
Q 017760 68 NN-RKCLYTCAVRPAAIYGP 86 (366)
Q Consensus 68 ~~-~~~l~~~ilRp~~iyGp 86 (366)
.. .+.++..+-..+.....
T Consensus 84 ~~~~GkidiLvnnag~~~~~ 103 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGALGLT 103 (270)
T ss_pred HHhCCCCCEEEEcCCcCCCC
Confidence 22 45677777666555444
No 300
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=93.97 E-value=0.15 Score=48.72 Aligned_cols=26 Identities=35% Similarity=0.423 Sum_probs=23.6
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRG 35 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g 35 (366)
+|++|.|+||||++|..|++.|.+++
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~ 28 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERD 28 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCC
Confidence 45799999999999999999999765
No 301
>PTZ00325 malate dehydrogenase; Provisional
Probab=93.69 E-value=0.14 Score=48.73 Aligned_cols=37 Identities=22% Similarity=0.311 Sum_probs=31.0
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~ 46 (366)
+|.||.|||++|.+|+.++..|..++ .++++++|+..
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~ 44 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG 44 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC
Confidence 45799999999999999999998655 25899999943
No 302
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.67 E-value=0.089 Score=52.40 Aligned_cols=55 Identities=29% Similarity=0.312 Sum_probs=39.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~~~~~v~~i~gD 65 (366)
+++++|+|+|+++ +|..+++.|++.|+ +|++.|++...... ..+...+++++.+|
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~ 60 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVLGE 60 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEeCC
Confidence 4568999999888 99999999999995 99999987532211 12223356666665
No 303
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=93.51 E-value=0.12 Score=50.30 Aligned_cols=36 Identities=28% Similarity=0.549 Sum_probs=32.6
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+++|.|.||+|.+|..++..|.+.| ++|++.|+++
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G-~~V~~~d~~~ 132 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSG-YQVRILEQDD 132 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCC-CeEEEeCCCc
Confidence 35789999999999999999999999 5999999864
No 304
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=93.17 E-value=0.17 Score=47.81 Aligned_cols=35 Identities=23% Similarity=0.307 Sum_probs=30.7
Q ss_pred ccCCeEEEEcC--CChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGG--LGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGg--tGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
+++++++|||| +.-||.++++.|.+.|. +|++ .++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~ 43 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTW 43 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeC
Confidence 66899999999 79999999999999996 7887 443
No 305
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.03 E-value=0.12 Score=44.14 Aligned_cols=55 Identities=29% Similarity=0.255 Sum_probs=41.9
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccc-cccCCCeEEEEcc
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSH-LLINHGVHCIQGL 65 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~-~~~~~~v~~i~gD 65 (366)
.+..|++||+.--||+.+++.|.+.|. +|+++.|++..-..- ...+..++.+++|
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~~I~Pi~~D 61 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPSLIIPIVGD 61 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCcceeeeEec
Confidence 568899999999999999999999996 999999886322110 1112347888888
No 306
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=93.02 E-value=0.12 Score=46.66 Aligned_cols=52 Identities=23% Similarity=0.303 Sum_probs=39.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
|+++|. |.|-+|+.+|+.|.+.| |+|+++|+++...............+.+|
T Consensus 1 m~iiIi-G~G~vG~~va~~L~~~g-~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd 52 (225)
T COG0569 1 MKIIII-GAGRVGRSVARELSEEG-HNVVLIDRDEERVEEFLADELDTHVVIGD 52 (225)
T ss_pred CEEEEE-CCcHHHHHHHHHHHhCC-CceEEEEcCHHHHHHHhhhhcceEEEEec
Confidence 466766 78999999999999999 69999998875432211123567888888
No 307
>PRK06849 hypothetical protein; Provisional
Probab=92.93 E-value=0.17 Score=49.40 Aligned_cols=36 Identities=25% Similarity=0.174 Sum_probs=32.9
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++++|||||++..+|..+++.|.+.| ++|+++|..+
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G-~~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAG-HTVILADSLK 38 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCc
Confidence 46899999999999999999999999 5999998875
No 308
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=92.76 E-value=0.15 Score=48.21 Aligned_cols=35 Identities=26% Similarity=0.447 Sum_probs=31.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+++|.|+| +|.+|..++..|.+.| ++|+++|+++.
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G-~~V~v~d~~~~ 36 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAG-HEVRLWDADPA 36 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCC-CeeEEEeCCHH
Confidence 35899997 9999999999999999 59999999853
No 309
>PLN00106 malate dehydrogenase
Probab=92.74 E-value=0.22 Score=47.40 Aligned_cols=38 Identities=21% Similarity=0.364 Sum_probs=32.5
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~ 47 (366)
...||.|||++|.+|+.++..|..++. ++++++|+++.
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~ 55 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT 55 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 346899999999999999999997652 58999999873
No 310
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=92.68 E-value=1.6 Score=40.98 Aligned_cols=120 Identities=20% Similarity=0.120 Sum_probs=74.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccCCCeEEEEcc---------------ccCCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL---------------RKNNRK 71 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD---------------ks~~~~ 71 (366)
...+-|+|||.-.-+|..||++|.++|+ .|.+-...++.... .....+....++.| +..++.
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 3456799999999999999999999995 89988866544322 11114667777888 224444
Q ss_pred CceEEEEeCCc---cccCCCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCC
Q 017760 72 CLYTCAVRPAA---IYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 148 (366)
Q Consensus 72 ~l~~~ilRp~~---iyGp~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 148 (366)
++ +-.+.-++ ++||.|--.+..+.+.+.- |..=+-.+..+++..++ ...
T Consensus 106 gL-wglVNNAGi~~~~g~~ewl~~~d~~~~l~v--------------NllG~irvT~~~lpLlr-------------~ar 157 (322)
T KOG1610|consen 106 GL-WGLVNNAGISGFLGPDEWLTVEDYRKVLNV--------------NLLGTIRVTKAFLPLLR-------------RAR 157 (322)
T ss_pred cc-eeEEeccccccccCccccccHHHHHHHHhh--------------hhhhHHHHHHHHHHHHH-------------hcc
Confidence 54 44455554 4555554333333333321 22233456677777775 356
Q ss_pred CccEEecCC
Q 017760 149 GQPYFVSDG 157 (366)
Q Consensus 149 g~~y~I~~~ 157 (366)
|++.|+++.
T Consensus 158 GRvVnvsS~ 166 (322)
T KOG1610|consen 158 GRVVNVSSV 166 (322)
T ss_pred CeEEEeccc
Confidence 888888753
No 311
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.66 E-value=0.18 Score=50.10 Aligned_cols=72 Identities=24% Similarity=0.189 Sum_probs=46.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc--cccccCCCeEEEEccccC--CCCCceEEEEeCCc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW--SHLLINHGVHCIQGLRKN--NRKCLYTCAVRPAA 82 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~--~~~~~~~~v~~i~gDks~--~~~~l~~~ilRp~~ 82 (366)
+.+++|+|||++| +|.+.++.|.+.|+ +|.+.|++..... ...+...++++..++... ...+.+.++..|+.
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi 78 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHPLELLDEDFDLMVKNPGI 78 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCC
Confidence 3568899999998 99999999999995 8999997653221 122333456665543110 01124555555543
No 312
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=92.52 E-value=0.19 Score=48.93 Aligned_cols=38 Identities=18% Similarity=0.316 Sum_probs=32.2
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++++|.|.||||++|..|++.|.++...+|..+.++..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~s 74 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRK 74 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhh
Confidence 45799999999999999999999985458999877543
No 313
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=92.42 E-value=0.25 Score=43.58 Aligned_cols=37 Identities=38% Similarity=0.565 Sum_probs=31.9
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+++++|+|+|. |-+|+++++.|.+.|. +|++.|+++
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~-~Vvv~D~~~ 61 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGA-KLIVADINE 61 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 456789999976 6899999999999995 899998775
No 314
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.38 E-value=2.7 Score=36.01 Aligned_cols=56 Identities=27% Similarity=0.287 Sum_probs=43.4
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-ccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-HLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-~~~~~~~v~~i~gD 65 (366)
.++..-+||||..-+|.+.++.|.+.|. .|..+|...++... ......++.|...|
T Consensus 7 ~kglvalvtggasglg~ataerlakqga-sv~lldlp~skg~~vakelg~~~vf~pad 63 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGA-SVALLDLPQSKGADVAKELGGKVVFTPAD 63 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCc-eEEEEeCCcccchHHHHHhCCceEEeccc
Confidence 4456679999999999999999999996 89999998776543 22234566777777
No 315
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=92.23 E-value=0.49 Score=42.25 Aligned_cols=73 Identities=21% Similarity=0.170 Sum_probs=49.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCCCCccccc-----ccCCCeEEEEcc---------------cc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRTNSPWSHL-----LINHGVHCIQGL---------------RK 67 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~~~~~~~~-----~~~~~v~~i~gD---------------ks 67 (366)
|..+.|+||||+--||-.|+++|++. |. ++++..++.++..... ...++++.++.| +.
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i-~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGI-EVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCc-EEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 44567999999999999999999976 54 5555555533321111 125789999988 22
Q ss_pred CCCCCceEEEEeCCc
Q 017760 68 NNRKCLYTCAVRPAA 82 (366)
Q Consensus 68 ~~~~~l~~~ilRp~~ 82 (366)
-...|++.-+...+.
T Consensus 80 Vg~~GlnlLinNaGi 94 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGI 94 (249)
T ss_pred cccCCceEEEeccce
Confidence 446677766665544
No 316
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=92.19 E-value=0.24 Score=47.60 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=28.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
|++|+|.||||++|+.+++.|.+....++.++..+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~ 36 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR 36 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence 47999999999999999999998743477666543
No 317
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=92.19 E-value=0.14 Score=47.66 Aligned_cols=53 Identities=23% Similarity=0.146 Sum_probs=40.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc-----ccccCCCeEEEEcc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS-----HLLINHGVHCIQGL 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~-----~~~~~~~v~~i~gD 65 (366)
.=.+|||||.-||.+.+++|.++|. +|+++.|+..+-.. .+...-.++++..|
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~D 107 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAID 107 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEe
Confidence 4478999999999999999999996 89999998754321 11112457777887
No 318
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=92.09 E-value=0.22 Score=43.37 Aligned_cols=129 Identities=21% Similarity=0.208 Sum_probs=67.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc------ccCCCCCceEEEEeCCcccc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL------RKNNRKCLYTCAVRPAAIYG 85 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD------ks~~~~~l~~~ilRp~~iyG 85 (366)
|+|.|. |.||+|-.++..|.+.| ++|+++|.++..- ..+......+..-. +..+.+++..+
T Consensus 1 M~I~Vi-GlGyvGl~~A~~lA~~G-~~V~g~D~~~~~v--~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t--------- 67 (185)
T PF03721_consen 1 MKIAVI-GLGYVGLPLAAALAEKG-HQVIGVDIDEEKV--EALNNGELPIYEPGLDELLKENVSAGRLRAT--------- 67 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTT-SEEEEE-S-HHHH--HHHHTTSSSS-CTTHHHHHHHHHHTTSEEEE---------
T ss_pred CEEEEE-CCCcchHHHHHHHHhCC-CEEEEEeCChHHH--HHHhhccccccccchhhhhccccccccchhh---------
Confidence 578888 89999999999999999 6999999886321 11111111110000 00111111111
Q ss_pred CCCCCCHHHHHHHHHcCCCC----eeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCCCCC
Q 017760 86 PGEERHLPRIVSLAKLGLVP----FKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN 161 (366)
Q Consensus 86 p~~~~~l~~~i~~~~~g~~~----~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~~vs 161 (366)
...-..+...... ..+-+.+...|+.|++.+++.+...++ .+..+-+-+.-++.
T Consensus 68 -------~~~~~ai~~adv~~I~VpTP~~~~~~~Dls~v~~a~~~i~~~l~---------------~~~lvV~~STvppG 125 (185)
T PF03721_consen 68 -------TDIEEAIKDADVVFICVPTPSDEDGSPDLSYVESAIESIAPVLR---------------PGDLVVIESTVPPG 125 (185)
T ss_dssp -------SEHHHHHHH-SEEEE----EBETTTSBETHHHHHHHHHHHHHHC---------------SCEEEEESSSSSTT
T ss_pred -------hhhhhhhhccceEEEecCCCccccCCccHHHHHHHHHHHHHHHh---------------hcceEEEccEEEEe
Confidence 0011112222111 112233455688899999998887774 25666666666655
Q ss_pred HHH-HHHHHHHhcCC
Q 017760 162 TFE-FIGPLLKTLDY 175 (366)
Q Consensus 162 ~~e-~~~~l~~~lg~ 175 (366)
.-| +...+.+..+.
T Consensus 126 tt~~~~~~ile~~~~ 140 (185)
T PF03721_consen 126 TTEELLKPILEKRSG 140 (185)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred eehHhhhhhhhhhcc
Confidence 444 88888777664
No 319
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=92.01 E-value=0.16 Score=50.60 Aligned_cols=50 Identities=22% Similarity=0.331 Sum_probs=38.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccC-CCeEEEEcc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLIN-HGVHCIQGL 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~-~~v~~i~gD 65 (366)
|+|+|+|+ |.+|+++++.|.+.| ++|+++++++... ..... .+++.+.||
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g-~~v~vid~~~~~~--~~~~~~~~~~~~~gd 51 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGEN-NDVTVIDTDEERL--RRLQDRLDVRTVVGN 51 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CcEEEEECCHHHH--HHHHhhcCEEEEEeC
Confidence 47999976 999999999999999 5899998875432 22222 467888888
No 320
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=91.97 E-value=0.5 Score=41.17 Aligned_cols=50 Identities=38% Similarity=0.537 Sum_probs=33.6
Q ss_pred cCCeEEEEcC----------------CChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 10 EGKTFLVTGG----------------LGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 10 ~~~~VlITGg----------------tGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
++++||||+| ||-.|.+|++++..+|+ +|+.+....+.. .+++++.+..+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga-~V~li~g~~~~~-----~p~~~~~i~v~ 67 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGA-EVTLIHGPSSLP-----PPPGVKVIRVE 67 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT--EEEEEE-TTS---------TTEEEEE-S
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCC-EEEEEecCcccc-----ccccceEEEec
Confidence 4577888876 79999999999999995 899997663211 13577777776
No 321
>PRK04148 hypothetical protein; Provisional
Probab=91.80 E-value=0.16 Score=41.68 Aligned_cols=50 Identities=16% Similarity=0.256 Sum_probs=38.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
+++|++.| .| .|.+++..|.+.| ++|+++|.++... +......++.+.+|
T Consensus 17 ~~kileIG-~G-fG~~vA~~L~~~G-~~ViaIDi~~~aV--~~a~~~~~~~v~dD 66 (134)
T PRK04148 17 NKKIVELG-IG-FYFKVAKKLKESG-FDVIVIDINEKAV--EKAKKLGLNAFVDD 66 (134)
T ss_pred CCEEEEEE-ec-CCHHHHHHHHHCC-CEEEEEECCHHHH--HHHHHhCCeEEECc
Confidence 46799884 55 8999999999999 5999999997532 22334567888888
No 322
>PRK08655 prephenate dehydrogenase; Provisional
Probab=91.79 E-value=0.24 Score=49.26 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=31.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|+|.|.||+|.+|..+++.|.+.| ++|++.++++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G-~~V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKG-FEVIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCC-CEEEEEECChH
Confidence 479999999999999999999999 58999998754
No 323
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=91.66 E-value=0.21 Score=49.67 Aligned_cols=54 Identities=20% Similarity=0.290 Sum_probs=39.7
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
.+++|+|.|+ |.+|+.+++.|.+.| ++|+++|.++...........++..+.||
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~-~~v~vid~~~~~~~~~~~~~~~~~~i~gd 283 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEG-YSVKLIERDPERAEELAEELPNTLVLHGD 283 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHCCCCeEEECC
Confidence 4688999977 999999999999999 58999987764321111112467788888
No 324
>PLN00015 protochlorophyllide reductase
Probab=91.59 E-value=0.2 Score=47.20 Aligned_cols=50 Identities=14% Similarity=0.005 Sum_probs=36.4
Q ss_pred EEEcCCChhHHHHHHHHHHcC-CceEEEEecCCCCccc--ccc--cCCCeEEEEcc
Q 017760 15 LVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTNSPWS--HLL--INHGVHCIQGL 65 (366)
Q Consensus 15 lITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~~~~~--~~~--~~~~v~~i~gD 65 (366)
+||||++.||.++++.|.++| + +|++.+|+...... ..+ ....+.++++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D 55 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKW-HVVMACRDFLKAERAAKSAGMPKDSYTVMHLD 55 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEec
Confidence 599999999999999999999 6 79999886532210 111 12356777888
No 325
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=91.33 E-value=0.52 Score=38.74 Aligned_cols=57 Identities=19% Similarity=0.242 Sum_probs=41.0
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccccCCCeEEEEcc
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLLINHGVHCIQGL 65 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~~~~~v~~i~gD 65 (366)
..++++++|.|+ |-.|+.++..|.+.|..+|++++|+...... .......++.+..+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~ 67 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE 67 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH
Confidence 456789999976 7799999999999998779999987543211 12223455666654
No 326
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=91.27 E-value=0.32 Score=47.52 Aligned_cols=37 Identities=38% Similarity=0.548 Sum_probs=32.6
Q ss_pred ccCCeEEEEcC----------------CChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGG----------------LGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGg----------------tGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++|+|||| ||.+|.+++++|..+|+ +|+.+..+.
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga-~V~~~~g~~ 235 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGA-DVTLITGPV 235 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCC-EEEEeCCCC
Confidence 66799999999 47899999999999996 899987654
No 327
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=91.17 E-value=0.4 Score=45.13 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=31.1
Q ss_pred ccCCeEEEEcCC--ChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGL--GHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgt--GfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
.++++++||||+ .-||+++++.|.++|+ +|++.++.
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga-~Vvv~~~~ 43 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGA-TILVGTWV 43 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCC-EEEEEecc
Confidence 356899999995 8899999999999996 89887754
No 328
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=91.08 E-value=0.38 Score=45.54 Aligned_cols=35 Identities=23% Similarity=0.326 Sum_probs=30.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~ 46 (366)
|||.|+|++|++|..++..|...|. .+|+++|++.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 5899999999999999999999983 2599999954
No 329
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=91.00 E-value=0.74 Score=44.07 Aligned_cols=38 Identities=29% Similarity=0.304 Sum_probs=29.4
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHc--CCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRR--GAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~--g~~~V~~~dr~~ 46 (366)
+++++|.|.||||++|..|++.|.++ ...++..+....
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~ 41 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQFPVGELYALASEE 41 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccC
Confidence 45679999999999999999999984 323666664443
No 330
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=90.91 E-value=0.32 Score=48.02 Aligned_cols=37 Identities=27% Similarity=0.367 Sum_probs=32.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|.+++|.|. |.|++|..++..|.+.| ++|+++|+++.
T Consensus 1 m~~~kI~VI-GlG~~G~~~A~~La~~G-~~V~~~D~~~~ 37 (415)
T PRK11064 1 MSFETISVI-GLGYIGLPTAAAFASRQ-KQVIGVDINQH 37 (415)
T ss_pred CCccEEEEE-CcchhhHHHHHHHHhCC-CEEEEEeCCHH
Confidence 345789998 78999999999999999 69999998764
No 331
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=90.87 E-value=0.34 Score=42.77 Aligned_cols=36 Identities=31% Similarity=0.316 Sum_probs=29.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
||++. .||+|.+|+.|++.|.+.| |+|+.-.++.++
T Consensus 1 m~~~~-i~GtGniG~alA~~~a~ag-~eV~igs~r~~~ 36 (211)
T COG2085 1 MMIIA-IIGTGNIGSALALRLAKAG-HEVIIGSSRGPK 36 (211)
T ss_pred CcEEE-EeccChHHHHHHHHHHhCC-CeEEEecCCChh
Confidence 34555 4799999999999999999 699999777664
No 332
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=90.76 E-value=0.46 Score=44.51 Aligned_cols=37 Identities=24% Similarity=0.540 Sum_probs=32.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.++++++|||+ |-+|++++..|.+.|..+|++++|+.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 45678999998 79999999999999975699999875
No 333
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=90.70 E-value=0.41 Score=45.29 Aligned_cols=78 Identities=18% Similarity=0.170 Sum_probs=49.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCcccccccCC--CeEEEE--ccc--cCCCCCceEEEEeCCccc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSPWSHLLINH--GVHCIQ--GLR--KNNRKCLYTCAVRPAAIY 84 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~~~~~~~~~--~v~~i~--gDk--s~~~~~l~~~ilRp~~iy 84 (366)
+||.|+|++|.+|+.++..|...+. .++.++|++.......++.+. ...... +|. ...-.+-+.+++=.+.--
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~ 80 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR 80 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence 5899999999999999999988873 589999998222222222221 122221 321 233445667777666666
Q ss_pred cCCCC
Q 017760 85 GPGEE 89 (366)
Q Consensus 85 Gp~~~ 89 (366)
.|++.
T Consensus 81 k~g~t 85 (310)
T cd01337 81 KPGMT 85 (310)
T ss_pred CCCCC
Confidence 67664
No 334
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=90.60 E-value=3.7 Score=38.79 Aligned_cols=76 Identities=22% Similarity=0.245 Sum_probs=48.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCc-eEEEEecCCCCccc--ccccC------CCeEEEEcc-ccCCCCCceEEEEeCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAY-QVRAFDLRTNSPWS--HLLIN------HGVHCIQGL-RKNNRKCLYTCAVRPA 81 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~-~V~~~dr~~~~~~~--~~~~~------~~v~~i~gD-ks~~~~~l~~~ilRp~ 81 (366)
+||.|+|+ |.+|+.++..|..++.. +++++|+......- .++.+ .+. .+.+| ....-.+-+.+++=-+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~-~i~~~~~y~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDV-KITGDGDYEDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCce-EEecCCChhhhcCCCEEEEeCC
Confidence 57999999 99999999999888754 89999999433221 11111 111 22221 1233345667777666
Q ss_pred ccccCCCC
Q 017760 82 AIYGPGEE 89 (366)
Q Consensus 82 ~iyGp~~~ 89 (366)
.-=.||..
T Consensus 79 ~prKpGmt 86 (313)
T COG0039 79 VPRKPGMT 86 (313)
T ss_pred CCCCCCCC
Confidence 66677754
No 335
>PRK08818 prephenate dehydrogenase; Provisional
Probab=90.29 E-value=0.52 Score=45.72 Aligned_cols=36 Identities=25% Similarity=0.217 Sum_probs=31.4
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~ 45 (366)
...++|.|.|++|.+|..+++.|.+. + ++|+++|+.
T Consensus 2 ~~~~~I~IIGl~GliGgslA~alk~~~~-~~V~g~D~~ 38 (370)
T PRK08818 2 IAQPVVGIVGSAGAYGRWLARFLRTRMQ-LEVIGHDPA 38 (370)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCC-CEEEEEcCC
Confidence 34579999999999999999999975 6 589999975
No 336
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=90.16 E-value=0.42 Score=45.56 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=29.5
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCC-c-----eEEEEecCC
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGA-Y-----QVRAFDLRT 46 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~-~-----~V~~~dr~~ 46 (366)
||.|||++|.+|+.++..|...|. . +++.+|+++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~ 41 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP 41 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence 799999999999999999998663 2 499999986
No 337
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=89.81 E-value=0.6 Score=38.87 Aligned_cols=38 Identities=24% Similarity=0.419 Sum_probs=31.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+.++|+|+|+ |.+|..+++.|.+.|.++|.+.++++.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~ 54 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLE 54 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHH
Confidence 34678999987 999999999999986458999988753
No 338
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=89.74 E-value=0.28 Score=47.83 Aligned_cols=51 Identities=33% Similarity=0.458 Sum_probs=35.9
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCc-eEEEEecCCCCccc--ccccCCCeEEEEcc
Q 017760 14 FLVTGGLGHVGSALCLELVRRGAY-QVRAFDLRTNSPWS--HLLINHGVHCIQGL 65 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g~~-~V~~~dr~~~~~~~--~~~~~~~v~~i~gD 65 (366)
|+|.|| |++|+.+++.|.+.+-. +|++.||+...... .......++.++.|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d 54 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVD 54 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEe
Confidence 789999 99999999999998744 79999998754321 11145688999988
No 339
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=89.68 E-value=1.2 Score=42.81 Aligned_cols=25 Identities=28% Similarity=0.434 Sum_probs=22.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRG 35 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g 35 (366)
.++|.|.||||++|..|++.|.+++
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~ 31 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRD 31 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCC
Confidence 3689999999999999999999876
No 340
>PRK05442 malate dehydrogenase; Provisional
Probab=89.65 E-value=0.69 Score=44.12 Aligned_cols=38 Identities=16% Similarity=0.287 Sum_probs=32.0
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCC-c-----eEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGA-Y-----QVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~-~-----~V~~~dr~~~ 47 (366)
++.||.|+|++|.+|+.++..|...+. . ++..+|+++.
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~ 46 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA 46 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence 457999999999999999999988763 3 7999998654
No 341
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=89.55 E-value=0.48 Score=41.07 Aligned_cols=33 Identities=27% Similarity=0.563 Sum_probs=27.6
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+|.|.|+ |.+|+.++..++..| ++|+..|+++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G-~~V~l~d~~~~ 33 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAG-YEVTLYDRSPE 33 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTT-SEEEEE-SSHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCC-CcEEEEECChH
Confidence 5788866 999999999999999 59999998753
No 342
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=89.50 E-value=0.61 Score=39.58 Aligned_cols=35 Identities=31% Similarity=0.558 Sum_probs=29.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|++|.+. |.|-+|+.+++.|.+.| ++|.+.||++.
T Consensus 1 m~~Ig~I-GlG~mG~~~a~~L~~~g-~~v~~~d~~~~ 35 (163)
T PF03446_consen 1 MMKIGFI-GLGNMGSAMARNLAKAG-YEVTVYDRSPE 35 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTT-TEEEEEESSHH
T ss_pred CCEEEEE-chHHHHHHHHHHHHhcC-CeEEeeccchh
Confidence 5789888 56999999999999999 59999998853
No 343
>PRK06444 prephenate dehydrogenase; Provisional
Probab=89.32 E-value=0.49 Score=41.67 Aligned_cols=28 Identities=29% Similarity=0.420 Sum_probs=25.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEE
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVR 40 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~ 40 (366)
|+|.|.||+|-+|+.+++.|.+.|+ .|.
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~-~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGL-GVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCC-EEE
Confidence 4899999999999999999999994 786
No 344
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=89.27 E-value=0.49 Score=42.67 Aligned_cols=27 Identities=19% Similarity=0.389 Sum_probs=23.4
Q ss_pred cCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 18 GGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 18 GgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
.++|.+|.++++.|.++|+ +|+++++.
T Consensus 22 ~SSGgIG~AIA~~la~~Ga-~Vvlv~~~ 48 (227)
T TIGR02114 22 HSTGHLGKIITETFLSAGH-EVTLVTTK 48 (227)
T ss_pred CcccHHHHHHHHHHHHCCC-EEEEEcCh
Confidence 4589999999999999995 89998753
No 345
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=89.10 E-value=0.39 Score=42.32 Aligned_cols=38 Identities=21% Similarity=0.350 Sum_probs=33.1
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..+..+|+|.|.+| +|+.+++.|...|..+++.+|...
T Consensus 16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ 53 (198)
T cd01485 16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL 53 (198)
T ss_pred HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence 34567899998888 999999999999998899998765
No 346
>PRK05086 malate dehydrogenase; Provisional
Probab=89.03 E-value=0.55 Score=44.49 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=29.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHH-cC-CceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVR-RG-AYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~-~g-~~~V~~~dr~~~ 47 (366)
|||+|.||+|.+|++++..|.. .+ .++++++|+++.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~ 38 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV 38 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence 5899999999999999998854 22 257899998743
No 347
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=88.95 E-value=0.64 Score=44.61 Aligned_cols=27 Identities=22% Similarity=0.447 Sum_probs=23.1
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCCceEE
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGAYQVR 40 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~ 40 (366)
+|.|.||||++|..|++.|.+++ |.+.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~-hp~~ 27 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERN-FPID 27 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCC-CChh
Confidence 58999999999999999999977 3433
No 348
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=88.86 E-value=0.89 Score=42.90 Aligned_cols=36 Identities=31% Similarity=0.362 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
+|+|.|. |+|.+|++++..|.+.| ++|+..+|+...
T Consensus 4 ~m~I~ii-G~G~~G~~lA~~l~~~G-~~V~~~~r~~~~ 39 (308)
T PRK14619 4 PKTIAIL-GAGAWGSTLAGLASANG-HRVRVWSRRSGL 39 (308)
T ss_pred CCEEEEE-CccHHHHHHHHHHHHCC-CEEEEEeCCCCC
Confidence 4689888 78999999999999999 699999987653
No 349
>PLN02256 arogenate dehydrogenase
Probab=88.82 E-value=0.7 Score=43.64 Aligned_cols=38 Identities=24% Similarity=0.304 Sum_probs=32.8
Q ss_pred ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+.+.+++|.|.| .|.+|..+++.|.+.| ++|+++++++
T Consensus 32 ~~~~~~kI~IIG-~G~mG~slA~~L~~~G-~~V~~~d~~~ 69 (304)
T PLN02256 32 EKSRKLKIGIVG-FGNFGQFLAKTFVKQG-HTVLATSRSD 69 (304)
T ss_pred ccCCCCEEEEEe-eCHHHHHHHHHHHhCC-CEEEEEECcc
Confidence 345678999997 7999999999999999 5899999875
No 350
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=88.57 E-value=0.66 Score=44.55 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=26.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEE
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAF 42 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~ 42 (366)
++|.|+|++|++|+.|++.|.+....++..+
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v 31 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKV 31 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEE
Confidence 4799999999999999999988763377777
No 351
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=88.49 E-value=0.93 Score=38.85 Aligned_cols=37 Identities=32% Similarity=0.453 Sum_probs=32.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..+++|+|.|+++.+|..+++.|.++|. +|...+|+.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~ 78 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKT 78 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCc
Confidence 5679999999988899999999999996 799998764
No 352
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=88.41 E-value=0.43 Score=37.66 Aligned_cols=48 Identities=25% Similarity=0.376 Sum_probs=33.9
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
|+|.|. |-+|..+++.|.+.+ .+|++++.++... ......++.++.||
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~-~~vvvid~d~~~~--~~~~~~~~~~i~gd 48 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG-IDVVVIDRDPERV--EELREEGVEVIYGD 48 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT-SEEEEEESSHHHH--HHHHHTTSEEEES-
T ss_pred eEEEcC-CHHHHHHHHHHHhCC-CEEEEEECCcHHH--HHHHhccccccccc
Confidence 567755 789999999999977 4899999876432 33334557777777
No 353
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=88.39 E-value=0.76 Score=43.81 Aligned_cols=36 Identities=25% Similarity=0.380 Sum_probs=30.3
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCCc------eEEEEecCCCC
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGAY------QVRAFDLRTNS 48 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~~------~V~~~dr~~~~ 48 (366)
+|.|+|++|.+|+.++..|...+.. +++++|+++..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~ 42 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM 42 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc
Confidence 5899999999999999999986642 59999997654
No 354
>PLN02602 lactate dehydrogenase
Probab=88.37 E-value=1 Score=43.36 Aligned_cols=36 Identities=19% Similarity=0.356 Sum_probs=30.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNS 48 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~ 48 (366)
+||.|+|+ |.+|+.++..|...+. .++.++|+++..
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~ 74 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDK 74 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCch
Confidence 69999995 9999999999998773 579999997643
No 355
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=88.32 E-value=0.72 Score=44.41 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=27.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEE-ecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAF-DLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~-dr~~ 46 (366)
++|.|.||||++|..+++.|.+....+++.+ +.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~ 36 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRE 36 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccch
Confidence 4799999999999999999998743477744 5443
No 356
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=88.32 E-value=0.94 Score=43.14 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=31.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCC-c-----eEEEEecCCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGA-Y-----QVRAFDLRTNS 48 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~-~-----~V~~~dr~~~~ 48 (366)
.||.|+|++|.+|+.++..|...|. . +++++|+++..
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~ 45 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQAL 45 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcc
Confidence 5899999999999999999998774 3 69999996543
No 357
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=88.24 E-value=0.76 Score=42.97 Aligned_cols=37 Identities=22% Similarity=0.315 Sum_probs=31.5
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
.+.+|.|.| +|.+|..++..++..| ++|+++|+++..
T Consensus 4 ~~~~V~ViG-aG~mG~~iA~~~a~~G-~~V~l~d~~~~~ 40 (286)
T PRK07819 4 AIQRVGVVG-AGQMGAGIAEVCARAG-VDVLVFETTEEL 40 (286)
T ss_pred CccEEEEEc-ccHHHHHHHHHHHhCC-CEEEEEECCHHH
Confidence 346899995 5999999999999999 599999998753
No 358
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=88.23 E-value=0.76 Score=42.89 Aligned_cols=35 Identities=26% Similarity=0.514 Sum_probs=30.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.++|.|.| +|.+|+.++..|.+.| ++|++.|+++.
T Consensus 3 ~~kIaViG-aG~mG~~iA~~la~~G-~~V~l~d~~~~ 37 (287)
T PRK08293 3 IKNVTVAG-AGVLGSQIAFQTAFHG-FDVTIYDISDE 37 (287)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcC-CeEEEEeCCHH
Confidence 46899995 6999999999999999 59999998753
No 359
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=87.85 E-value=1.1 Score=39.60 Aligned_cols=35 Identities=23% Similarity=0.517 Sum_probs=30.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
.++++|+|.|| |-+|...++.|++.|. +|+.++..
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga-~V~VIs~~ 42 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGA-HIVVISPE 42 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC-eEEEEcCC
Confidence 56789999976 9999999999999994 89988643
No 360
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=87.81 E-value=0.8 Score=43.38 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=30.2
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCC
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRT 46 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~ 46 (366)
||.|+|++|.+|+.++..|...+. .+++++|+++
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~ 35 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG 35 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 589999999999999999988873 5799999987
No 361
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=87.76 E-value=1.1 Score=42.46 Aligned_cols=39 Identities=23% Similarity=0.445 Sum_probs=32.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNS 48 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~ 48 (366)
..++||.|+|+ |.+|+.++..|...|. .++..+|++...
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~ 43 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEK 43 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCch
Confidence 34579999997 9999999999998884 479999997654
No 362
>PRK06223 malate dehydrogenase; Reviewed
Probab=87.75 E-value=1 Score=42.48 Aligned_cols=37 Identities=27% Similarity=0.376 Sum_probs=31.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
|+||.|.|+ |.+|+.++..+...|..+|+++|+++..
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~ 38 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGV 38 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCch
Confidence 479999998 9999999999998872289999996543
No 363
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=87.74 E-value=0.74 Score=42.80 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=30.7
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++++|.|. |+|.+|..++..+.+.| ++|+++|+++.
T Consensus 2 ~~~kI~VI-G~G~mG~~ia~~la~~g-~~V~~~d~~~~ 37 (282)
T PRK05808 2 GIQKIGVI-GAGTMGNGIAQVCAVAG-YDVVMVDISDA 37 (282)
T ss_pred CccEEEEE-ccCHHHHHHHHHHHHCC-CceEEEeCCHH
Confidence 34689888 55999999999999999 48999998764
No 364
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=87.71 E-value=0.55 Score=41.33 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.3
Q ss_pred ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+..+..+|+|.|.+| +|+.+++.|...|..+++.+|-..
T Consensus 17 ~~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ 55 (197)
T cd01492 17 KRLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRT 55 (197)
T ss_pred HHHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence 345568999998777 999999999999988899998764
No 365
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=87.60 E-value=0.78 Score=43.35 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=29.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
||+|.|.| +|.+|..++..|.+.| ++|.++++++
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~g-~~V~~~~r~~ 34 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARNG-HDVTLWARDP 34 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEEECCH
Confidence 46899995 6999999999999999 5899999875
No 366
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=87.38 E-value=0.77 Score=44.44 Aligned_cols=35 Identities=26% Similarity=0.286 Sum_probs=30.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
|+|.|. |+||+|-..+--|.+.| |+|+++|+.+.+
T Consensus 1 MkI~vi-GtGYVGLv~g~~lA~~G-HeVv~vDid~~K 35 (414)
T COG1004 1 MKITVI-GTGYVGLVTGACLAELG-HEVVCVDIDESK 35 (414)
T ss_pred CceEEE-CCchHHHHHHHHHHHcC-CeEEEEeCCHHH
Confidence 577777 89999999999999999 899999998643
No 367
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=87.19 E-value=2.2 Score=41.04 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=27.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHH-cCCce---EEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVR-RGAYQ---VRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~-~g~~~---V~~~dr~~ 46 (366)
.++|.|.||||++|+.+++.|.+ ... + +..+....
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f-~v~~l~~~aS~~ 43 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKF-NIAEVTLLSSKR 43 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCC-CcccEEEEECcc
Confidence 36899999999999999999996 443 4 55565443
No 368
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=87.03 E-value=1.1 Score=41.55 Aligned_cols=38 Identities=24% Similarity=0.458 Sum_probs=32.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..+++++|+|+ |-+|++++..|.+.|..+|++++|+..
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~ 158 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVE 158 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 45678999986 999999999999999558999998753
No 369
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=86.98 E-value=1.8 Score=32.43 Aligned_cols=35 Identities=34% Similarity=0.534 Sum_probs=30.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL 44 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr 44 (366)
...++++|.|. |.+|+.++..|.+.+..+|...|+
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 55689999988 999999999999985458888877
No 370
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=86.66 E-value=1.3 Score=41.99 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=26.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d 43 (366)
+.+|.|.||||++|..|++.|.+...-++..+.
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~ 34 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIP 34 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 578999999999999999999998732444443
No 371
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=86.66 E-value=1.9 Score=31.67 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=29.5
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP 49 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~ 49 (366)
+|+|. |+|++|-.++..|.+.| .+|+.+.+++...
T Consensus 1 ~vvVi-GgG~ig~E~A~~l~~~g-~~vtli~~~~~~~ 35 (80)
T PF00070_consen 1 RVVVI-GGGFIGIELAEALAELG-KEVTLIERSDRLL 35 (80)
T ss_dssp EEEEE-SSSHHHHHHHHHHHHTT-SEEEEEESSSSSS
T ss_pred CEEEE-CcCHHHHHHHHHHHHhC-cEEEEEeccchhh
Confidence 45665 78999999999999999 4999999887544
No 372
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=86.59 E-value=0.87 Score=42.33 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=29.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|+|.|.| .|.+|..++..|.+.| ++|.+.|+++.
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g-~~V~~~d~~~~ 34 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLG-HTVYGVSRRES 34 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCC-CEEEEEECCHH
Confidence 3788885 8999999999999999 59999998753
No 373
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=86.49 E-value=1.5 Score=41.80 Aligned_cols=40 Identities=23% Similarity=0.370 Sum_probs=33.6
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
+.+.+||.|.| +|.+|+.++..+...|..+|+.+|+++..
T Consensus 3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~ 42 (321)
T PTZ00082 3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNI 42 (321)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCch
Confidence 44567999998 69999999999998885479999998764
No 374
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=86.48 E-value=1.3 Score=41.39 Aligned_cols=37 Identities=24% Similarity=0.380 Sum_probs=33.1
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
..++++|+|.|.+|.+|+.++..|.++|. +|+...++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~ 192 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSR 192 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 35678999999999999999999999997 89999774
No 375
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=86.37 E-value=0.96 Score=43.18 Aligned_cols=34 Identities=24% Similarity=0.229 Sum_probs=30.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
||+|.|. |+|.+|..++..|.+.| ++|++++|++
T Consensus 2 ~mkI~Ii-G~G~mG~~~A~~L~~~G-~~V~~~~r~~ 35 (341)
T PRK08229 2 MARICVL-GAGSIGCYLGGRLAAAG-ADVTLIGRAR 35 (341)
T ss_pred CceEEEE-CCCHHHHHHHHHHHhcC-CcEEEEecHH
Confidence 3679988 79999999999999999 6999999864
No 376
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=86.37 E-value=1.1 Score=43.79 Aligned_cols=33 Identities=36% Similarity=0.588 Sum_probs=29.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+|+|. |+|++|...+.+|.++| ++|.++++..
T Consensus 2 ~~vvII-GaG~~G~~~A~~La~~g-~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVI-GAGITGVTTAYALAQRG-YQVTVFDRHR 34 (410)
T ss_pred CEEEEE-CCCHHHHHHHHHHHHCC-CeEEEEeCCC
Confidence 578888 67999999999999999 5999999975
No 377
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=86.19 E-value=1.6 Score=35.32 Aligned_cols=34 Identities=18% Similarity=0.404 Sum_probs=27.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHH-cCCceEEEE-ecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVR-RGAYQVRAF-DLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~-~g~~~V~~~-dr~~ 46 (366)
++|.|.|.+|-+|+.+++.+.+ .+ .++.+. ++++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~-~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPG-FELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTT-EEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCC-cEEEEEEecCC
Confidence 4899999999999999999999 56 465555 4444
No 378
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=86.12 E-value=6.8 Score=36.85 Aligned_cols=107 Identities=21% Similarity=0.128 Sum_probs=66.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc--ccc----cCCCeEEEEcc------------ccCCCCCc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS--HLL----INHGVHCIQGL------------RKNNRKCL 73 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~--~~~----~~~~v~~i~gD------------ks~~~~~l 73 (366)
.+|+||||+--+|.+++.++...|. +|+++.|+..+-.. ..+ ..++|.+..+| +.....+.
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga-~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGA-DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccC-ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 5899999999999999999999994 89999887643211 000 12346677777 11223355
Q ss_pred eEEEEeCCccccCCCC-CCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHh
Q 017760 74 YTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 132 (366)
Q Consensus 74 ~~~ilRp~~iyGp~~~-~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 132 (366)
....++-+++.=|+.- ..-+..++...+ .++.--=+++.+.+.++.
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~-------------vNylgt~~v~~~~~~~mk 159 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMD-------------VNYLGTVNVAKAAARAMK 159 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHH-------------hhhhhhHHHHHHHHHHhh
Confidence 5666666665555431 112222322211 344445578888888886
No 379
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=86.02 E-value=1.1 Score=41.95 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=29.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
|+|.|.|+ |-+|..++..|.+.| ++|+.++|++
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g-~~V~~~~r~~ 33 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAG-HDVTLVARRG 33 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCh
Confidence 47899965 999999999999999 6999999864
No 380
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=85.88 E-value=1 Score=42.03 Aligned_cols=34 Identities=21% Similarity=0.532 Sum_probs=29.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++|.|.|+ |.+|..++..|.+.| ++|++.|+++.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G-~~V~~~d~~~~ 35 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSG-FQTTLVDIKQE 35 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCC-CcEEEEeCCHH
Confidence 57888855 999999999999999 59999998864
No 381
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=85.87 E-value=1.7 Score=43.20 Aligned_cols=55 Identities=24% Similarity=0.296 Sum_probs=38.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccC--CCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLIN--HGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~--~~v~~i~gD 65 (366)
+.+++|+|+|++ -.|..+++.|.++|+ +|.+.|..+.......+.. .++.+..++
T Consensus 3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~-~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~ 59 (445)
T PRK04308 3 FQNKKILVAGLG-GTGISMIAYLRKNGA-EVAAYDAELKPERVAQIGKMFDGLVFYTGR 59 (445)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCC-EEEEEeCCCCchhHHHHhhccCCcEEEeCC
Confidence 345789999874 799999999999995 8999998765432222221 356665553
No 382
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.82 E-value=1.7 Score=40.78 Aligned_cols=39 Identities=23% Similarity=0.347 Sum_probs=34.4
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
...+++|.|.|.+|.+|..++..|.++|+ +|+..+++..
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~ 194 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST 194 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC
Confidence 35689999999999999999999999995 8999977654
No 383
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=85.81 E-value=1.2 Score=41.51 Aligned_cols=37 Identities=24% Similarity=0.354 Sum_probs=31.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|+.++|.|. |+|.+|..++..|.+.| ++|++.|+++.
T Consensus 2 ~~~~kI~vI-GaG~mG~~iA~~la~~G-~~V~l~d~~~~ 38 (292)
T PRK07530 2 MAIKKVGVI-GAGQMGNGIAHVCALAG-YDVLLNDVSAD 38 (292)
T ss_pred CCCCEEEEE-CCcHHHHHHHHHHHHCC-CeEEEEeCCHH
Confidence 445789998 56999999999999999 59999998754
No 384
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=85.78 E-value=0.83 Score=37.21 Aligned_cols=42 Identities=29% Similarity=0.366 Sum_probs=26.8
Q ss_pred CCccccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 1 MHLSENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 1 m~~~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
|+.+.. ....++|-|.|+ |-+|++|++.|.+.| ++|..+..+
T Consensus 1 ~~~~~~-~~~~l~I~iIGa-GrVG~~La~aL~~ag-~~v~~v~sr 42 (127)
T PF10727_consen 1 MNTPAT-QAARLKIGIIGA-GRVGTALARALARAG-HEVVGVYSR 42 (127)
T ss_dssp ------------EEEEECT-SCCCCHHHHHHHHTT-SEEEEESSC
T ss_pred CCcccc-CCCccEEEEECC-CHHHHHHHHHHHHCC-CeEEEEEeC
Confidence 444433 234578999965 999999999999999 589887543
No 385
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=85.73 E-value=1.3 Score=43.14 Aligned_cols=33 Identities=24% Similarity=0.275 Sum_probs=29.1
Q ss_pred CCeEEEEcCCChhHHH--HHHHHHHcCCceEEEEecC
Q 017760 11 GKTFLVTGGLGHVGSA--LCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~--L~~~L~~~g~~~V~~~dr~ 45 (366)
++++||||+++-+|.+ +++.| +.|+ +|.++++.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~ 75 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFE 75 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecC
Confidence 5799999999999999 89999 9996 78888754
No 386
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=85.70 E-value=1.5 Score=41.44 Aligned_cols=36 Identities=22% Similarity=0.287 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++.|+|+|. |+|-+|..++..|.+.| ++|+.++|++
T Consensus 3 ~~~m~I~Ii-G~GaiG~~lA~~L~~~g-~~V~~~~r~~ 38 (313)
T PRK06249 3 SETPRIGII-GTGAIGGFYGAMLARAG-FDVHFLLRSD 38 (313)
T ss_pred CcCcEEEEE-CCCHHHHHHHHHHHHCC-CeEEEEEeCC
Confidence 345789999 78999999999999999 6999999875
No 387
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=85.68 E-value=1.3 Score=41.54 Aligned_cols=37 Identities=27% Similarity=0.302 Sum_probs=31.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+..++|.|. |.|.+|..++..|++.| ++|+++|+++.
T Consensus 2 ~~~~~V~vI-G~G~mG~~iA~~l~~~G-~~V~~~d~~~~ 38 (295)
T PLN02545 2 AEIKKVGVV-GAGQMGSGIAQLAAAAG-MDVWLLDSDPA 38 (295)
T ss_pred CCcCEEEEE-CCCHHHHHHHHHHHhcC-CeEEEEeCCHH
Confidence 345789988 56999999999999999 59999998764
No 388
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=85.61 E-value=0.98 Score=43.32 Aligned_cols=38 Identities=32% Similarity=0.402 Sum_probs=32.0
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..+..+|+|.|+ |-+|+++++.|.+.|..+++++|.+.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 455678999976 55999999999999976899998875
No 389
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=85.52 E-value=2.2 Score=36.76 Aligned_cols=38 Identities=29% Similarity=0.492 Sum_probs=33.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
..+++|.|. |.|-||+++++.|..-|. +|+++|+....
T Consensus 34 l~g~tvgIi-G~G~IG~~vA~~l~~fG~-~V~~~d~~~~~ 71 (178)
T PF02826_consen 34 LRGKTVGII-GYGRIGRAVARRLKAFGM-RVIGYDRSPKP 71 (178)
T ss_dssp STTSEEEEE-STSHHHHHHHHHHHHTT--EEEEEESSCHH
T ss_pred cCCCEEEEE-EEcCCcCeEeeeeecCCc-eeEEecccCCh
Confidence 457899999 679999999999999996 99999998754
No 390
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=85.47 E-value=1.7 Score=40.48 Aligned_cols=37 Identities=30% Similarity=0.436 Sum_probs=33.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..+++|+|+|.++.+|+-++..|.++|. +|+.+.++.
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t 192 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS 192 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc
Confidence 5689999999999999999999999996 899998754
No 391
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=85.19 E-value=1 Score=39.74 Aligned_cols=38 Identities=26% Similarity=0.420 Sum_probs=31.7
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..+..+|+|.|+ |-+|+.++..|.+.|..+++.+|.+.
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 55 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDV 55 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 345678999966 66999999999999976799998773
No 392
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=85.01 E-value=1.7 Score=41.36 Aligned_cols=36 Identities=19% Similarity=0.306 Sum_probs=31.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCC-c-----eEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGA-Y-----QVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~-----~V~~~dr~~ 46 (366)
..||.|+|++|++|++++..|...+. . +++.+|+++
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~ 44 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP 44 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence 35899999999999999999998873 4 799999965
No 393
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=84.62 E-value=5.6 Score=33.81 Aligned_cols=71 Identities=18% Similarity=0.142 Sum_probs=49.1
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc---------------ccCCCCCce
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL---------------RKNNRKCLY 74 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD---------------ks~~~~~l~ 74 (366)
+..+|+|-||-|-+|++.++.+..+++ -|-.+|........ .-..+.+| ++.+...++
T Consensus 2 sagrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~Ad------~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD 74 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQAD------SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD 74 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccccc------ceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence 446899999999999999999999995 89999998764321 22344455 335555666
Q ss_pred EEEEeCCccccCC
Q 017760 75 TCAVRPAAIYGPG 87 (366)
Q Consensus 75 ~~ilRp~~iyGp~ 87 (366)
.++--.++--|-.
T Consensus 75 av~CVAGGWAGGn 87 (236)
T KOG4022|consen 75 AVFCVAGGWAGGN 87 (236)
T ss_pred eEEEeeccccCCC
Confidence 6555455544443
No 394
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=84.52 E-value=1.2 Score=42.85 Aligned_cols=38 Identities=32% Similarity=0.415 Sum_probs=32.3
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.....+|+|.|+ |.+|+.++..|.+.|..+++++|...
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 345678999965 89999999999999977899999864
No 395
>PRK13553 fumarate reductase cytochrome b-556 subunit; Provisional
Probab=84.51 E-value=4.6 Score=36.90 Aligned_cols=74 Identities=23% Similarity=0.445 Sum_probs=54.5
Q ss_pred HHHHhccccCCCCCchHHHHHHHHHHHHHHHHhhc-------CC-CCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017760 255 SYWQDRKRKSLDGPTIYAWLFCLIGLPALFATAYL-------PD-IGPV-PILRTIGLFIFKSMWMMRLAFAIAVSAHVS 325 (366)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~w~~~~i~l~~~~~~~~l-------p~-~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 325 (366)
..++++.+.-....|.+||...+.++..++..++. |+ +||- +.- ...+..+|.+.++.+++...|++
T Consensus 107 ~~~r~h~~~m~H~DT~lW~~Q~iTG~ilf~~~~~Hl~~i~~~~~~Ig~~~Sa~----rv~~~~~w~fYlvlL~~v~lH~~ 182 (258)
T PRK13553 107 QIFRTHKHLMKHGDTSLWFIQAFTGFAMFFLASVHLYVMLTNPDKIGPYGSSD----RVVSQNMWLLYIVLLFAVELHGS 182 (258)
T ss_pred HHHHHHHhhccCCccchHHHHHHHHHHHHHHHHHHHHhhhcCccccCchhhHH----HHhCCcHHHHHHHHHHHHHHHHH
Confidence 44555555445667789999999888777666654 55 9996 444 23344589999999999999999
Q ss_pred HHHHHHH
Q 017760 326 EGVFAWC 332 (366)
Q Consensus 326 e~~~~~~ 332 (366)
=++|.+.
T Consensus 183 iGLyR~~ 189 (258)
T PRK13553 183 IGLYRLA 189 (258)
T ss_pred Hhhhhee
Confidence 9999743
No 396
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=84.41 E-value=18 Score=36.50 Aligned_cols=140 Identities=21% Similarity=0.164 Sum_probs=73.8
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccC--CCeEEEEcccc-CCCCCceEEEEeCCccccC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLIN--HGVHCIQGLRK-NNRKCLYTCAVRPAAIYGP 86 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~--~~v~~i~gDks-~~~~~l~~~ilRp~~iyGp 86 (366)
.+++|+|.| -|-.|..+++.|.+.|+ +|.+.|.+...+....+.. .++++..++.. ..-.+.+.+++-|+.- +
T Consensus 6 ~~~~i~v~G-~G~sG~s~a~~L~~~G~-~v~~~D~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~d~vv~sp~I~--~ 81 (498)
T PRK02006 6 QGPMVLVLG-LGESGLAMARWCARHGA-RLRVADTREAPPNLAALRAELPDAEFVGGPFDPALLDGVDLVALSPGLS--P 81 (498)
T ss_pred CCCEEEEEe-ecHhHHHHHHHHHHCCC-EEEEEcCCCCchhHHHHHhhcCCcEEEeCCCchhHhcCCCEEEECCCCC--C
Confidence 457899996 55699999999999995 8999997654322222322 25566665411 1112445666655421 2
Q ss_pred CCCCCHHHHHHHHHcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCCccEEecCCC-CCCHHHH
Q 017760 87 GEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGF-PINTFEF 165 (366)
Q Consensus 87 ~~~~~l~~~i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~I~~~~-~vs~~e~ 165 (366)
......+ .+..+++... .+. ..++.+.+.+ ..+. .+.....+..|++.. ..|..++
T Consensus 82 ~~~~~~~-~~~~a~~~~i-~v~---------~~~e~~~~~~-~~l~-----------~~~~~~~~I~VTGTnGKTTTt~m 138 (498)
T PRK02006 82 LEAALAP-LVAAARERGI-PVW---------GEIELFAQAL-AALG-----------ASGYAPKVLAITGTNGKTTTTAL 138 (498)
T ss_pred cccccCH-HHHHHHHCCC-cEE---------EHHHHHHHHH-hhhc-----------cccCCCCEEEEECCCcHHHHHHH
Confidence 1100113 3333333221 222 1334443332 2211 111122567776632 3777888
Q ss_pred HHHHHHhcCCC
Q 017760 166 IGPLLKTLDYD 176 (366)
Q Consensus 166 ~~~l~~~lg~~ 176 (366)
+..+.+..|++
T Consensus 139 l~~iL~~~g~~ 149 (498)
T PRK02006 139 TGLLCERAGKK 149 (498)
T ss_pred HHHHHHHcCCC
Confidence 88888888765
No 397
>PTZ00117 malate dehydrogenase; Provisional
Probab=84.16 E-value=2 Score=40.77 Aligned_cols=38 Identities=21% Similarity=0.423 Sum_probs=32.2
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
+.+||.|+|+ |.+|+.++..+...|..+++.+|+++..
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~ 41 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGV 41 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCcc
Confidence 4578999996 9999999999998885589999998654
No 398
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=83.90 E-value=1.4 Score=39.45 Aligned_cols=39 Identities=36% Similarity=0.563 Sum_probs=32.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS 51 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~ 51 (366)
++..+.||+||+|.++|..+...|+ +|....|+....+.
T Consensus 3 ~k~~vfgg~gflg~~ic~~a~~sgy-~vvsvsrsgas~~s 41 (283)
T KOG4288|consen 3 PKLIVFGGNGFLGKRICQEAVTSGY-QVVSVSRSGASPHS 41 (283)
T ss_pred ccceeecccccchhhhhHHHHhcCc-eEEEeccccCCCcC
Confidence 4678899999999999999999995 89999888655443
No 399
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=83.86 E-value=1.6 Score=41.04 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=30.9
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~ 47 (366)
..++|.|.| +|-+|..++..|.+.|. ++|+++|+++.
T Consensus 5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~ 42 (307)
T PRK07502 5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAE 42 (307)
T ss_pred CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHH
Confidence 346899996 99999999999999884 47999998753
No 400
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=83.71 E-value=1.7 Score=40.61 Aligned_cols=35 Identities=29% Similarity=0.458 Sum_probs=30.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.++|.|. |+|.+|..++..|.+.| ++|++.|+++.
T Consensus 3 i~~I~Vi-GaG~mG~~iA~~la~~G-~~V~l~d~~~~ 37 (291)
T PRK06035 3 IKVIGVV-GSGVMGQGIAQVFARTG-YDVTIVDVSEE 37 (291)
T ss_pred CcEEEEE-CccHHHHHHHHHHHhcC-CeEEEEeCCHH
Confidence 3689998 56999999999999999 49999998764
No 401
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=83.58 E-value=1.8 Score=40.47 Aligned_cols=36 Identities=36% Similarity=0.329 Sum_probs=31.4
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+.+++|+||+|.+|..+++.+...|. +|+++++++
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~ 197 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSP 197 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCH
Confidence 357899999999999999999999995 898887654
No 402
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=83.56 E-value=3.3 Score=41.61 Aligned_cols=55 Identities=25% Similarity=0.272 Sum_probs=39.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcc---cccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPW---SHLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~---~~~~~~~~v~~i~gD 65 (366)
..+++|+|.|+ |.+|..+++.|.++|. +|+++|.++.... ...+...++++..++
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~ 71 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGP 71 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECC
Confidence 34678999975 8899999999999995 8999997653221 122334577777664
No 403
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=83.46 E-value=2.5 Score=37.45 Aligned_cols=54 Identities=30% Similarity=0.405 Sum_probs=38.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccc-cCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLL-INHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~-~~~~v~~i~gD 65 (366)
.++++|+|. |+|-+|.+-++.|++.|. +|++++....+.. ..+ ...+++.+.++
T Consensus 7 l~gk~vlVv-GgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l-~~l~~~~~i~~~~~~ 61 (205)
T TIGR01470 7 LEGRAVLVV-GGGDVALRKARLLLKAGA-QLRVIAEELESEL-TLLAEQGGITWLARC 61 (205)
T ss_pred cCCCeEEEE-CcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHH-HHHHHcCCEEEEeCC
Confidence 456899998 579999999999999996 8999875543221 122 22357777664
No 404
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=83.41 E-value=1.5 Score=34.19 Aligned_cols=36 Identities=33% Similarity=0.519 Sum_probs=29.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.++++|+|.|| |-+|.+=++.|++.|. +|+.++...
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA-~v~vis~~~ 40 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEAGA-KVTVISPEI 40 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCCTB-EEEEEESSE
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC-EEEEECCch
Confidence 46789999977 9999999999999996 899997653
No 405
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=83.27 E-value=1.6 Score=43.05 Aligned_cols=34 Identities=32% Similarity=0.438 Sum_probs=29.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|+|.|. |.|++|..++..|.+.| ++|+++|+++.
T Consensus 1 mkI~vI-GlG~~G~~lA~~La~~G-~~V~~~d~~~~ 34 (411)
T TIGR03026 1 MKIAVI-GLGYVGLPLAALLADLG-HEVTGVDIDQE 34 (411)
T ss_pred CEEEEE-CCCchhHHHHHHHHhcC-CeEEEEECCHH
Confidence 368888 78999999999999999 59999998764
No 406
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=82.93 E-value=1.9 Score=40.98 Aligned_cols=35 Identities=31% Similarity=0.468 Sum_probs=30.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+|+|.|. |+|-+|..++..|.+.| ++|++.+|++.
T Consensus 4 ~m~I~iI-G~G~mG~~ia~~L~~~G-~~V~~~~r~~~ 38 (328)
T PRK14618 4 GMRVAVL-GAGAWGTALAVLAASKG-VPVRLWARRPE 38 (328)
T ss_pred CCeEEEE-CcCHHHHHHHHHHHHCC-CeEEEEeCCHH
Confidence 4689998 78999999999999999 69999998643
No 407
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=82.80 E-value=1.2 Score=45.89 Aligned_cols=50 Identities=24% Similarity=0.383 Sum_probs=38.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
.+|+|. |.|-+|+++++.|.++| ++|+++|.++.. .+.....+...+.||
T Consensus 418 ~hiiI~-G~G~~G~~la~~L~~~g-~~vvvId~d~~~--~~~~~~~g~~~i~GD 467 (558)
T PRK10669 418 NHALLV-GYGRVGSLLGEKLLAAG-IPLVVIETSRTR--VDELRERGIRAVLGN 467 (558)
T ss_pred CCEEEE-CCChHHHHHHHHHHHCC-CCEEEEECCHHH--HHHHHHCCCeEEEcC
Confidence 567877 78999999999999999 589999987643 233334567777777
No 408
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=82.38 E-value=2.1 Score=40.58 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=31.4
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+.+|+|+||+|-+|..+++.+...|. +|+++++++
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~ 186 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSD 186 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCH
Confidence 467999999999999999999999997 788887664
No 409
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=82.32 E-value=2.7 Score=40.67 Aligned_cols=35 Identities=26% Similarity=0.203 Sum_probs=25.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHH-cCC--ceEEEEecC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVR-RGA--YQVRAFDLR 45 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~-~g~--~~V~~~dr~ 45 (366)
|++|.|.||||++|+.+.+.+++ +.. .+++.+...
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 36899999999999999995555 443 126665543
No 410
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=82.09 E-value=2.4 Score=39.69 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=31.8
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..+++++|+|. |.+|+.+++.|...|. +|+..+|++.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~-~V~v~~R~~~ 185 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGA-RVFVGARSSA 185 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 45789999966 7799999999999996 8999988753
No 411
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=82.07 E-value=2.4 Score=40.05 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=30.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~ 47 (366)
|+|.|.|+ |.+|..++..|..+|. ++|.++|++..
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~ 36 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKA 36 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCch
Confidence 47999987 9999999999999983 58999999864
No 412
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=81.97 E-value=2.8 Score=39.70 Aligned_cols=36 Identities=22% Similarity=0.395 Sum_probs=30.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~ 47 (366)
.+||.|+|+ |.+|+.++..|...|. .++.++|++..
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~ 39 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVED 39 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcc
Confidence 468999995 9999999999988773 57999998764
No 413
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=81.70 E-value=3.9 Score=33.89 Aligned_cols=38 Identities=42% Similarity=0.575 Sum_probs=33.8
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..++++|+|.|.+.-+|..++..|.++|. +|...+.+.
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t 62 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKT 62 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCC
Confidence 35689999999999999999999999996 899997654
No 414
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=81.64 E-value=2.9 Score=39.21 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d 43 (366)
..+++|+|.|.+|.+|..++..|+++|+ +|+..+
T Consensus 156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~ 189 (296)
T PRK14188 156 LSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAH 189 (296)
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEEC
Confidence 5689999999999999999999999995 899995
No 415
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=81.48 E-value=2.2 Score=38.89 Aligned_cols=78 Identities=17% Similarity=0.107 Sum_probs=48.3
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCc----eEEEEecCCCCccc--ccc---c---CCCeEEEEcccc----------
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAY----QVRAFDLRTNSPWS--HLL---I---NHGVHCIQGLRK---------- 67 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~----~V~~~dr~~~~~~~--~~~---~---~~~v~~i~gDks---------- 67 (366)
..+-++|||++.-+|-++|.+|++..-. ++....|+.++... .++ . .-++++++.|-+
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 3456899999999999999999986411 25555666554322 111 1 236788888811
Q ss_pred ---CCCCCceEEEEeCCccccCC
Q 017760 68 ---NNRKCLYTCAVRPAAIYGPG 87 (366)
Q Consensus 68 ---~~~~~l~~~ilRp~~iyGp~ 87 (366)
.+-..++.+-+..+..--|+
T Consensus 82 di~~rf~~ld~iylNAg~~~~~g 104 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPG 104 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCc
Confidence 22235667777665544444
No 416
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=81.30 E-value=2.2 Score=40.56 Aligned_cols=36 Identities=17% Similarity=0.088 Sum_probs=28.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
|+||.|.||+||-|..|.+.|.+...-++.....+.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~ 37 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRE 37 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence 579999999999999999999998633555554443
No 417
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=81.21 E-value=3 Score=34.02 Aligned_cols=35 Identities=31% Similarity=0.461 Sum_probs=29.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..+|+|. |.|-+|+.+++.|.+.|..+++.+|...
T Consensus 2 ~~~v~ii-G~G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLII-GAGGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEE-STSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEE-CcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence 3578888 6788999999999999987899998664
No 418
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=81.19 E-value=2.9 Score=38.97 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=29.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSP 49 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~ 49 (366)
+++|+|. |.|.+|..+++.|.++|+ .|.+++++....
T Consensus 3 ~~~v~Iv-G~GliG~s~a~~l~~~g~-~v~i~g~d~~~~ 39 (279)
T COG0287 3 SMKVGIV-GLGLMGGSLARALKEAGL-VVRIIGRDRSAA 39 (279)
T ss_pred CcEEEEE-CCchHHHHHHHHHHHcCC-eEEEEeecCcHH
Confidence 3566665 699999999999999994 787887776543
No 419
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=81.01 E-value=3.7 Score=34.83 Aligned_cols=37 Identities=35% Similarity=0.551 Sum_probs=30.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.++++++|.|.++.+|.-|+..|.++|+ .|+......
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T 70 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKT 70 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTS
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCC
Confidence 5689999999999999999999999996 899987664
No 420
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=80.72 E-value=2.9 Score=38.64 Aligned_cols=36 Identities=19% Similarity=0.339 Sum_probs=31.0
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.+++++|+|+ |-+|++++..|.+.|. +|.+++|+..
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~-~v~v~~R~~~ 151 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADC-NVIIANRTVS 151 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCC-EEEEEeCCHH
Confidence 3578999987 7899999999999995 8999988753
No 421
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=80.63 E-value=3.2 Score=40.31 Aligned_cols=36 Identities=33% Similarity=0.461 Sum_probs=30.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
|++|+|.|| |.+|.-++..+.+.|+ +|+++|.++..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~-~v~~~d~~~~~ 37 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGY-KVIVLDPDPDS 37 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCC-EEEEEeCCCCC
Confidence 578999977 7999999999999995 89999976543
No 422
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=80.40 E-value=3.1 Score=34.27 Aligned_cols=34 Identities=32% Similarity=0.531 Sum_probs=28.8
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+|+|.|. |-+|+.+++.|.+.|..+++++|...-
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v 34 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTV 34 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCc
Confidence 5788865 899999999999999878999987643
No 423
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=80.36 E-value=3.6 Score=37.76 Aligned_cols=35 Identities=20% Similarity=0.191 Sum_probs=27.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHc-CCceEEE-EecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRR-GAYQVRA-FDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~-~dr~~ 46 (366)
+++|.|+|++|.+|+.+++.+.+. +. ++.+ +|+++
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~-elvav~d~~~ 37 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDL-ELVAAVDRPG 37 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCC
Confidence 368999999999999999998875 54 6665 45443
No 424
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=80.30 E-value=2.9 Score=35.23 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=28.5
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
||.|. |+|-.|.+++..|.++| ++|...++++
T Consensus 1 KI~Vi-GaG~~G~AlA~~la~~g-~~V~l~~~~~ 32 (157)
T PF01210_consen 1 KIAVI-GAGNWGTALAALLADNG-HEVTLWGRDE 32 (157)
T ss_dssp EEEEE-SSSHHHHHHHHHHHHCT-EEEEEETSCH
T ss_pred CEEEE-CcCHHHHHHHHHHHHcC-CEEEEEeccH
Confidence 57788 77999999999999999 7999998875
No 425
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=80.30 E-value=3.2 Score=39.98 Aligned_cols=37 Identities=24% Similarity=0.335 Sum_probs=31.9
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
++++|+|.| .|.+|...+.+|.++|. +|+.++.....
T Consensus 3 ~~~~vvVIG-gGi~Gls~A~~La~~G~-~V~vie~~~~~ 39 (387)
T COG0665 3 MKMDVVIIG-GGIVGLSAAYYLAERGA-DVTVLEAGEAG 39 (387)
T ss_pred CcceEEEEC-CcHHHHHHHHHHHHcCC-EEEEEecCccC
Confidence 456789997 99999999999999995 89999887643
No 426
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=80.26 E-value=3 Score=42.60 Aligned_cols=36 Identities=33% Similarity=0.510 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+++++++|+|+ |-+|++++..|.+.|. +|.+++|+.
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~G~-~V~i~nR~~ 412 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEKGA-RVVIANRTY 412 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 45688999988 7999999999999997 899998764
No 427
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=80.25 E-value=2.9 Score=35.48 Aligned_cols=91 Identities=19% Similarity=0.210 Sum_probs=49.7
Q ss_pred ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEccccCCCCCceEEEEeCCccccC
Q 017760 7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGLRKNNRKCLYTCAVRPAAIYGP 86 (366)
Q Consensus 7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gDks~~~~~l~~~ilRp~~iyGp 86 (366)
.++.+++++|+ |-|.+|+.+++.|...|. +|+..+++|-.. -+...++.+....++......+-.|+ -
T Consensus 19 ~~l~Gk~vvV~-GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~a--lqA~~dGf~v~~~~~a~~~adi~vta--------T 86 (162)
T PF00670_consen 19 LMLAGKRVVVI-GYGKVGKGIARALRGLGA-RVTVTEIDPIRA--LQAAMDGFEVMTLEEALRDADIFVTA--------T 86 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT--EEEEE-SSHHHH--HHHHHTT-EEE-HHHHTTT-SEEEE---------S
T ss_pred eeeCCCEEEEe-CCCcccHHHHHHHhhCCC-EEEEEECChHHH--HHhhhcCcEecCHHHHHhhCCEEEEC--------C
Confidence 35668889988 789999999999999996 899998876322 12223566666554444444442222 2
Q ss_pred CCCCC-HHHHHHHHHcCCCCeeec
Q 017760 87 GEERH-LPRIVSLAKLGLVPFKIG 109 (366)
Q Consensus 87 ~~~~~-l~~~i~~~~~g~~~~~~g 109 (366)
|.... ....+..+++|-.+.-.|
T Consensus 87 G~~~vi~~e~~~~mkdgail~n~G 110 (162)
T PF00670_consen 87 GNKDVITGEHFRQMKDGAILANAG 110 (162)
T ss_dssp SSSSSB-HHHHHHS-TTEEEEESS
T ss_pred CCccccCHHHHHHhcCCeEEeccC
Confidence 22232 245666677776544334
No 428
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=80.20 E-value=3 Score=38.96 Aligned_cols=38 Identities=21% Similarity=0.358 Sum_probs=31.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
...++|+|.|+ |-.|++++..|.+.|..+|++++|+..
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ 162 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPA 162 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence 44578999966 559999999999999768999998754
No 429
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=79.88 E-value=3 Score=39.24 Aligned_cols=35 Identities=26% Similarity=0.456 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.++|.|. |+|.+|..++..|.+.| ++|+++|+++.
T Consensus 4 ~~~I~vI-GaG~mG~~iA~~l~~~g-~~V~~~d~~~~ 38 (311)
T PRK06130 4 IQNLAII-GAGTMGSGIAALFARKG-LQVVLIDVMEG 38 (311)
T ss_pred ccEEEEE-CCCHHHHHHHHHHHhCC-CeEEEEECCHH
Confidence 4679888 56999999999999999 58999998753
No 430
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=79.80 E-value=3.6 Score=34.78 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=29.2
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d 43 (366)
..++++|+|. |+|-+|.+.++.|++.|. +|+.++
T Consensus 10 ~l~~~~vlVv-GGG~va~rka~~Ll~~ga-~V~VIs 43 (157)
T PRK06719 10 NLHNKVVVII-GGGKIAYRKASGLKDTGA-FVTVVS 43 (157)
T ss_pred EcCCCEEEEE-CCCHHHHHHHHHHHhCCC-EEEEEc
Confidence 4567899998 679999999999999994 899884
No 431
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=79.70 E-value=3.3 Score=39.00 Aligned_cols=36 Identities=25% Similarity=0.285 Sum_probs=31.1
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++.+|+|+||+|-+|..+++.+...|. +|+++++++
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~ 173 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSD 173 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCH
Confidence 457899999999999999999888996 798887654
No 432
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=79.32 E-value=3.3 Score=38.37 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=29.5
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcC---CceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRG---AYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g---~~~V~~~dr~~ 46 (366)
+.|+|.+.| +|.+|+++++.|.+.| .++|++.+|++
T Consensus 2 ~~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~ 40 (279)
T PRK07679 2 SIQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSN 40 (279)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCC
Confidence 446899994 9999999999999987 14788888764
No 433
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=79.27 E-value=3 Score=39.42 Aligned_cols=38 Identities=24% Similarity=0.446 Sum_probs=32.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..+++|+|.|+ |-+|..+++.|...|.++|++++|++.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ 213 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYE 213 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 35789999976 999999999999877668999988754
No 434
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=79.17 E-value=2.8 Score=39.12 Aligned_cols=34 Identities=24% Similarity=0.496 Sum_probs=29.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++|.|. |.|.+|..+++.|.+.| ++|.+.|+++.
T Consensus 3 ~~Igvi-G~G~mG~~~a~~l~~~g-~~v~~~d~~~~ 36 (296)
T PRK11559 3 MKVGFI-GLGIMGKPMSKNLLKAG-YSLVVYDRNPE 36 (296)
T ss_pred ceEEEE-ccCHHHHHHHHHHHHCC-CeEEEEcCCHH
Confidence 579888 47999999999999999 59999988753
No 435
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=79.12 E-value=2.8 Score=39.31 Aligned_cols=34 Identities=29% Similarity=0.645 Sum_probs=29.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++|.|. |.|.+|..++..|.+.| ++|++.|+++.
T Consensus 2 ~~Ig~I-GlG~mG~~mA~~l~~~G-~~V~v~d~~~~ 35 (296)
T PRK15461 2 AAIAFI-GLGQMGSPMASNLLKQG-HQLQVFDVNPQ 35 (296)
T ss_pred CeEEEE-eeCHHHHHHHHHHHHCC-CeEEEEcCCHH
Confidence 478887 79999999999999999 59999998764
No 436
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=78.79 E-value=3.8 Score=38.80 Aligned_cols=35 Identities=9% Similarity=0.057 Sum_probs=27.9
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCC--ceEEEEecC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGA--YQVRAFDLR 45 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~--~~V~~~dr~ 45 (366)
...+|.| |+||-+|+.+.+.|.+++. .+++.+...
T Consensus 2 ~~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~ 38 (322)
T PRK06901 2 ATLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIE 38 (322)
T ss_pred CcceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccc
Confidence 3468999 9999999999999999873 356666554
No 437
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=78.72 E-value=2.8 Score=50.47 Aligned_cols=36 Identities=31% Similarity=0.349 Sum_probs=31.9
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHc-CCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRR-GAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~dr~~ 46 (366)
++++++||||+|-||..++++|.++ |. +|++++|++
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga-~viL~gRs~ 2032 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQA-HFILAGRSS 2032 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCC-EEEEEeCCc
Confidence 3578999999999999999999998 54 899999883
No 438
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=78.64 E-value=3.8 Score=39.14 Aligned_cols=37 Identities=27% Similarity=0.435 Sum_probs=32.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..+++|.|. |.|.+|+.+++.|...|. +|++.|+++.
T Consensus 144 l~g~~VgII-G~G~IG~~vA~~L~~~G~-~V~~~d~~~~ 180 (330)
T PRK12480 144 VKNMTVAII-GTGRIGAATAKIYAGFGA-TITAYDAYPN 180 (330)
T ss_pred cCCCEEEEE-CCCHHHHHHHHHHHhCCC-EEEEEeCChh
Confidence 457899999 679999999999999995 9999998753
No 439
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=78.64 E-value=3.7 Score=41.02 Aligned_cols=53 Identities=25% Similarity=0.296 Sum_probs=37.3
Q ss_pred ccCCeEEEEcCCChhHHH-HHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEc
Q 017760 9 IEGKTFLVTGGLGHVGSA-LCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQG 64 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~-L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~g 64 (366)
.++++|+|.|..| .|.. +++.|.+.|+ +|.+.|.++... ...+...++++..+
T Consensus 5 ~~~~~v~viG~G~-sG~s~~a~~L~~~G~-~V~~~D~~~~~~-~~~l~~~gi~~~~~ 58 (461)
T PRK00421 5 RRIKRIHFVGIGG-IGMSGLAEVLLNLGY-KVSGSDLKESAV-TQRLLELGAIIFIG 58 (461)
T ss_pred CCCCEEEEEEEch-hhHHHHHHHHHhCCC-eEEEECCCCChH-HHHHHHCCCEEeCC
Confidence 3457899997665 8888 8999999995 999999876432 22343446666543
No 440
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=78.61 E-value=3.5 Score=38.68 Aligned_cols=36 Identities=28% Similarity=0.336 Sum_probs=31.2
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++.+|+|+||+|-+|..+++.+...|. +|++++.++
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~ 178 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSD 178 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCH
Confidence 457899999999999999999999996 798887654
No 441
>PLN02712 arogenate dehydrogenase
Probab=78.20 E-value=4.1 Score=42.87 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=31.3
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..+++|.|.| .|.+|..+++.|.+.| ++|.+.|++.
T Consensus 50 ~~~~kIgIIG-~G~mG~slA~~L~~~G-~~V~~~dr~~ 85 (667)
T PLN02712 50 TTQLKIAIIG-FGNYGQFLAKTLISQG-HTVLAHSRSD 85 (667)
T ss_pred CCCCEEEEEc-cCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 3457899997 7999999999999999 5899999874
No 442
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=78.11 E-value=4.9 Score=35.95 Aligned_cols=37 Identities=35% Similarity=0.490 Sum_probs=28.6
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
.+++++|+|. |.|-+|+++++.|.+.|...|.+.|.+
T Consensus 20 ~l~g~~vaIq-GfGnVG~~~a~~L~~~G~~vV~vsD~~ 56 (217)
T cd05211 20 SLEGLTVAVQ-GLGNVGWGLAKKLAEEGGKVLAVSDPD 56 (217)
T ss_pred CcCCCEEEEE-CCCHHHHHHHHHHHHcCCEEEEEEcCC
Confidence 3567899998 589999999999999985344445543
No 443
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=78.01 E-value=6.3 Score=39.55 Aligned_cols=51 Identities=25% Similarity=0.343 Sum_probs=38.3
Q ss_pred ccCCeEEEEcC----------------CChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGG----------------LGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGg----------------tGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
.++++||||+| ||-.|.+|++.+..+|. +|+.+.-.... ..+.+++++..+
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA-~VtlI~Gp~~~-----~~p~~v~~i~V~ 320 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGA-EVTLISGPVDL-----ADPQGVKVIHVE 320 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCC-cEEEEeCCcCC-----CCCCCceEEEec
Confidence 67899999988 68999999999999995 89998522111 123566666665
No 444
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=77.75 E-value=4.1 Score=38.40 Aligned_cols=36 Identities=28% Similarity=0.603 Sum_probs=30.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNS 48 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~ 48 (366)
+||.|.|+ |.+|+.++..|...|. ++|.++|+++..
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~ 37 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEK 37 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcch
Confidence 37899975 9999999999999984 489999997654
No 445
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=77.68 E-value=3.4 Score=37.68 Aligned_cols=37 Identities=27% Similarity=0.355 Sum_probs=31.8
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+..+|+|.|. |-+|+.+++.|...|..+++++|...
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 45678999976 88999999999999987899998664
No 446
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=77.65 E-value=3.4 Score=41.56 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=30.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~ 47 (366)
||+|.|. |+|++|..++..|.+.|. ++|+++|+++.
T Consensus 1 ~m~I~Vi-G~GyvGl~~A~~lA~~g~g~~V~gvD~~~~ 37 (473)
T PLN02353 1 MVKICCI-GAGYVGGPTMAVIALKCPDIEVVVVDISVP 37 (473)
T ss_pred CCEEEEE-CCCHHHHHHHHHHHhcCCCCeEEEEECCHH
Confidence 4689998 899999999999999851 47999998753
No 447
>COG0163 UbiX 3-polyprenyl-4-hydroxybenzoate decarboxylase [Coenzyme metabolism]
Probab=77.60 E-value=7.6 Score=33.54 Aligned_cols=147 Identities=11% Similarity=0.045 Sum_probs=78.7
Q ss_pred eEEEEcCCCh-hHHHHHHHHHHcCCceEEEEecCCCCccc----------ccccCCCeEEEE-cc----ccCCCCCceEE
Q 017760 13 TFLVTGGLGH-VGSALCLELVRRGAYQVRAFDLRTNSPWS----------HLLINHGVHCIQ-GL----RKNNRKCLYTC 76 (366)
Q Consensus 13 ~VlITGgtGf-iG~~L~~~L~~~g~~~V~~~dr~~~~~~~----------~~~~~~~v~~i~-gD----ks~~~~~l~~~ 76 (366)
.|.||||||. .|-.|.+.|.+.| ++++++--+...... .+.......++. .| -+......+..
T Consensus 6 ivgisGASG~iygvrlLe~L~~~~-~e~hlviS~~a~~~~~~E~~~~~~~~~~~~~a~~~~~~~D~~A~iASGS~~~~gM 84 (191)
T COG0163 6 IVGISGASGAIYGVRLLEVLRELG-VETHLVISKAAKKTLKYETGNDESLGEVLALADVVHDEKDIGAPIASGSFRTDGM 84 (191)
T ss_pred EEEEeccccHHHHHHHHHHHHhcC-ceEEEEEcHHHHHHHHHHhCcchhhHHHhhhcceecCHHHccCcccCCCCCcCcE
Confidence 4679999996 5889999999999 588888433211100 000001111111 11 12334455577
Q ss_pred EEeCCccccC------CCCCCHHHHHHHH-HcCCCCeeecCCCcceeceeHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 017760 77 AVRPAAIYGP------GEERHLPRIVSLA-KLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG 149 (366)
Q Consensus 77 ilRp~~iyGp------~~~~~l~~~i~~~-~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g 149 (366)
++-|+.+=-- -.++.+.|..+-. +.++. .+.-..+...+-+|.+|.......-.-= -| +..
T Consensus 85 iI~PCSmkTla~IA~G~~dnLi~RAAdV~LKErR~-LVLv~REtPl~~ihLeNMlkl~~~GaiI----------~P-p~P 152 (191)
T COG0163 85 IIAPCSMKTLAAIAHGFADNLITRAADVALKERRP-LVLVPRETPLSLIHLENMLKLAEMGAII----------MP-PMP 152 (191)
T ss_pred EEEeCcHHHHHHHHhcccccHHHHHHHHHHhhCCc-eEEEeccCCccHHHHHHHHHHHHCCCEe----------cC-CCh
Confidence 7778764211 1234666666654 44444 3444456778889998876543222110 11 111
Q ss_pred ccEEecCCCCCCHHHHHHHHH----HhcCCC
Q 017760 150 QPYFVSDGFPINTFEFIGPLL----KTLDYD 176 (366)
Q Consensus 150 ~~y~I~~~~~vs~~e~~~~l~----~~lg~~ 176 (366)
.-| ..|-|..|+++.+. +.+|.+
T Consensus 153 aFY----~~P~sieDlvd~~v~rvLD~lgI~ 179 (191)
T COG0163 153 AFY----HKPQSIEDLVDFVVGRVLDLLGIE 179 (191)
T ss_pred hhh----cCCCCHHHHHHHHHHHHHHHhCCC
Confidence 123 36788888776653 445554
No 448
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=77.57 E-value=3.3 Score=38.02 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=29.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCC--ceEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGA--YQVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~--~~V~~~dr~~ 46 (366)
|++|.|.| .|-+|..++..|.+.|. ++|.+++|++
T Consensus 2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~ 38 (267)
T PRK11880 2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSP 38 (267)
T ss_pred CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence 46899996 69999999999999872 3788898875
No 449
>PRK13243 glyoxylate reductase; Reviewed
Probab=77.52 E-value=4.3 Score=38.85 Aligned_cols=37 Identities=22% Similarity=0.390 Sum_probs=32.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..+++|.|. |.|.+|+.+++.|...|. +|.+.|+.+.
T Consensus 148 L~gktvgIi-G~G~IG~~vA~~l~~~G~-~V~~~d~~~~ 184 (333)
T PRK13243 148 VYGKTIGII-GFGRIGQAVARRAKGFGM-RILYYSRTRK 184 (333)
T ss_pred CCCCEEEEE-CcCHHHHHHHHHHHHCCC-EEEEECCCCC
Confidence 467899999 569999999999999995 8999988653
No 450
>PLN02712 arogenate dehydrogenase
Probab=77.50 E-value=3.8 Score=43.09 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=31.7
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..+++|.|.| .|-+|..+++.|.+.| ++|++.|++.
T Consensus 367 ~~~~kIgIIG-lG~mG~slA~~L~~~G-~~V~~~dr~~ 402 (667)
T PLN02712 367 GSKLKIAIVG-FGNFGQFLAKTMVKQG-HTVLAYSRSD 402 (667)
T ss_pred CCCCEEEEEe-cCHHHHHHHHHHHHCc-CEEEEEECCh
Confidence 4568999997 8999999999999999 5899999874
No 451
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=77.37 E-value=4 Score=38.82 Aligned_cols=35 Identities=31% Similarity=0.423 Sum_probs=30.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
.++|.|. |+|-+|+.++..++..| ++|++.|+++.
T Consensus 7 i~~VaVI-GaG~MG~giA~~~a~aG-~~V~l~D~~~~ 41 (321)
T PRK07066 7 IKTFAAI-GSGVIGSGWVARALAHG-LDVVAWDPAPG 41 (321)
T ss_pred CCEEEEE-CcCHHHHHHHHHHHhCC-CeEEEEeCCHH
Confidence 3679888 56999999999999999 59999998763
No 452
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional
Probab=77.35 E-value=3.4 Score=39.03 Aligned_cols=35 Identities=23% Similarity=0.084 Sum_probs=28.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcC-CceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRG-AYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g-~~~V~~~dr~~~ 47 (366)
|+||||||+++-. .+++.|.+.| -++|++.|.++.
T Consensus 1 ~~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~ 36 (326)
T PRK12767 1 MMNILVTSAGRRV--QLVKALKKSLLKGRVIGADISEL 36 (326)
T ss_pred CceEEEecCCccH--HHHHHHHHhccCCEEEEECCCCc
Confidence 6899999997666 8899999884 148999987753
No 453
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=77.06 E-value=4.3 Score=38.12 Aligned_cols=37 Identities=32% Similarity=0.390 Sum_probs=32.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..+++++|.|. |-+|..++..|.+.|. +|++++|++.
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga-~V~v~~r~~~ 186 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGA-NVTVGARKSA 186 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCC-EEEEEECCHH
Confidence 35689999975 7799999999999996 8999998853
No 454
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=76.94 E-value=3.5 Score=37.90 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=29.4
Q ss_pred EEEEcCCChhHHHHHHHHHHcC--C-ceEEEEecCCCC
Q 017760 14 FLVTGGLGHVGSALCLELVRRG--A-YQVRAFDLRTNS 48 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g--~-~~V~~~dr~~~~ 48 (366)
|.|+|++|.+|..++..|+..| . .+|..+|+++..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~ 38 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEK 38 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCccc
Confidence 5789999999999999999887 2 389999997643
No 455
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=76.82 E-value=4.3 Score=40.16 Aligned_cols=38 Identities=24% Similarity=0.463 Sum_probs=32.6
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..+++|+|.|+ |-+|..+++.|...|..+|++++|+..
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ 215 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYE 215 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 45689999975 999999999999999668999988764
No 456
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=76.66 E-value=4.1 Score=39.79 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=28.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
|+|+|. |+|.+|..++.+|.++| ++|.++++..
T Consensus 1 ~~v~IV-G~Gi~Gls~A~~l~~~g-~~V~vle~~~ 33 (416)
T PRK00711 1 MRVVVL-GSGVIGVTSAWYLAQAG-HEVTVIDRQP 33 (416)
T ss_pred CEEEEE-CCcHHHHHHHHHHHHCC-CEEEEEeCCC
Confidence 368888 66999999999999999 4899999874
No 457
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=76.62 E-value=3.8 Score=39.25 Aligned_cols=36 Identities=19% Similarity=0.210 Sum_probs=31.0
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++.+|+|+|++|-+|..+++.+...|. +|++++.++
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~ 193 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 193 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCH
Confidence 467999999999999999999888996 788886554
No 458
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=76.57 E-value=3.2 Score=36.62 Aligned_cols=39 Identities=23% Similarity=0.303 Sum_probs=32.4
Q ss_pred ccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 7 EGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 7 ~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+.....+|+|.| .|-+|+.+++.|...|..+++++|...
T Consensus 17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ 55 (202)
T TIGR02356 17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDH 55 (202)
T ss_pred HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 345567899985 788999999999999987899998764
No 459
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=76.50 E-value=4.1 Score=40.51 Aligned_cols=78 Identities=14% Similarity=0.012 Sum_probs=48.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHc-------CC-ceEEEEecCCCCcccccc--c------CCCeEEEEccccCCCCCce
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRR-------GA-YQVRAFDLRTNSPWSHLL--I------NHGVHCIQGLRKNNRKCLY 74 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~-------g~-~~V~~~dr~~~~~~~~~~--~------~~~v~~i~gDks~~~~~l~ 74 (366)
.-||.|+|++|.+|++++..|... +. .++..+|++........+ . ..++.+..+| ...-.+-+
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~-ye~~kdaD 178 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDP-YEVFQDAE 178 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCC-HHHhCcCC
Confidence 468999999999999999999987 52 368888887655432111 1 0123222232 23333556
Q ss_pred EEEEeCCccccCCCC
Q 017760 75 TCAVRPAAIYGPGEE 89 (366)
Q Consensus 75 ~~ilRp~~iyGp~~~ 89 (366)
++++=-+.--+|++.
T Consensus 179 iVVitAG~prkpG~t 193 (444)
T PLN00112 179 WALLIGAKPRGPGME 193 (444)
T ss_pred EEEECCCCCCCCCCC
Confidence 777766666667654
No 460
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=76.43 E-value=4.6 Score=30.48 Aligned_cols=34 Identities=26% Similarity=0.369 Sum_probs=26.9
Q ss_pred eEEEEcCCChhHHHHHHHHHHcC--CceEEEE-ecCCC
Q 017760 13 TFLVTGGLGHVGSALCLELVRRG--AYQVRAF-DLRTN 47 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g--~~~V~~~-dr~~~ 47 (366)
||.|. |+|-+|+++++.|.+.| .++|... +|++.
T Consensus 1 kI~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~ 37 (96)
T PF03807_consen 1 KIGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPE 37 (96)
T ss_dssp EEEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHH
T ss_pred CEEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHH
Confidence 56777 99999999999999998 2378855 66653
No 461
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=76.43 E-value=4.3 Score=37.87 Aligned_cols=33 Identities=30% Similarity=0.405 Sum_probs=30.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEE
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAF 42 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~ 42 (366)
..+++|+|.|.||.+|.-++..|+++|+ +|+..
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~ga-tVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNA-TVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCC-EEEEE
Confidence 5689999999999999999999999995 89887
No 462
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=76.34 E-value=5.7 Score=34.85 Aligned_cols=37 Identities=30% Similarity=0.397 Sum_probs=33.4
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
..++++|+|.|.|.-+|.-|+..|.++|+ .|+..|.+
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~A-tVti~~~~ 95 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGA-RVYSVDIN 95 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCC-EEEEEecC
Confidence 46789999999999999999999999996 89999754
No 463
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=76.15 E-value=4.3 Score=38.44 Aligned_cols=35 Identities=23% Similarity=0.146 Sum_probs=29.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.+|+|+||+|-+|..+++.+...|..+|++++.++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~ 190 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSD 190 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence 79999999999999999988888953688886654
No 464
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=76.13 E-value=5.7 Score=37.05 Aligned_cols=36 Identities=25% Similarity=0.419 Sum_probs=32.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
..+++|+|.|.++.+|+-|+..|.++|. .|+....+
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~ 191 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK 191 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC
Confidence 5679999999999999999999999996 89887544
No 465
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=76.13 E-value=4.7 Score=39.91 Aligned_cols=38 Identities=32% Similarity=0.453 Sum_probs=32.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
..+++|+|+| .|.+|+.++..|...|. +|++.|+++..
T Consensus 210 l~Gk~VlViG-~G~IG~~vA~~lr~~Ga-~ViV~d~dp~r 247 (425)
T PRK05476 210 IAGKVVVVAG-YGDVGKGCAQRLRGLGA-RVIVTEVDPIC 247 (425)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCC-EEEEEcCCchh
Confidence 4678999996 58999999999999996 89999987644
No 466
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=76.09 E-value=4 Score=36.64 Aligned_cols=35 Identities=31% Similarity=0.280 Sum_probs=30.5
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++.+|+|+|++| +|..+++.+...| .+|+++++++
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g-~~v~~~~~~~ 168 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAG-ARVIVTDRSD 168 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcC-CeEEEEcCCH
Confidence 467899999999 9999999999999 4899997764
No 467
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=76.01 E-value=4.5 Score=38.89 Aligned_cols=34 Identities=38% Similarity=0.497 Sum_probs=29.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..|+|. |.|.+|..++.+|.++| ++|.++++...
T Consensus 4 ~dv~II-GgGi~G~s~A~~L~~~g-~~V~lie~~~~ 37 (376)
T PRK11259 4 YDVIVI-GLGSMGSAAGYYLARRG-LRVLGLDRFMP 37 (376)
T ss_pred ccEEEE-CCCHHHHHHHHHHHHCC-CeEEEEecccC
Confidence 457787 66999999999999999 48999998754
No 468
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=75.85 E-value=5.9 Score=36.93 Aligned_cols=36 Identities=28% Similarity=0.505 Sum_probs=31.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~ 45 (366)
..+++|+|.|.+..+|.-++..|.++|+ .|+.+...
T Consensus 155 l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~ 190 (285)
T PRK14191 155 IKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHIL 190 (285)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCC
Confidence 5689999999999999999999999996 89887543
No 469
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=75.82 E-value=7 Score=38.04 Aligned_cols=37 Identities=27% Similarity=0.457 Sum_probs=30.8
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
..++|+|+| +|..|..++..+.+.|+ +|+.+|.++..
T Consensus 11 ~~~~ilIiG-~g~~~~~~~~a~~~~G~-~v~~~~~~~~~ 47 (395)
T PRK09288 11 SATRVMLLG-SGELGKEVAIEAQRLGV-EVIAVDRYANA 47 (395)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCC-EEEEEeCCCCC
Confidence 457899996 57899999999999995 89999887643
No 470
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=75.76 E-value=5.1 Score=37.79 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=29.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
++|.|.|+ |++|..++..+...|..+|+++|+...
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~ 36 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEG 36 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCC
Confidence 57999975 999999999999988337999999654
No 471
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=75.50 E-value=4.1 Score=38.02 Aligned_cols=31 Identities=26% Similarity=0.312 Sum_probs=28.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDL 44 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr 44 (366)
|+|+|. |+|-+|..++..|.+.| ++|..++|
T Consensus 1 mkI~Ii-G~G~iG~~~a~~L~~~g-~~V~~~~r 31 (305)
T PRK12921 1 MRIAVV-GAGAVGGTFGGRLLEAG-RDVTFLVR 31 (305)
T ss_pred CeEEEE-CCCHHHHHHHHHHHHCC-CceEEEec
Confidence 478888 78999999999999999 69999998
No 472
>PRK07236 hypothetical protein; Provisional
Probab=75.14 E-value=5.4 Score=38.70 Aligned_cols=37 Identities=27% Similarity=0.290 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|+.++|+|. |+|..|..++..|.+.|. +|+++++.+.
T Consensus 4 ~~~~~ViIV-GaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (386)
T PRK07236 4 MSGPRAVVI-GGSLGGLFAALLLRRAGW-DVDVFERSPT 40 (386)
T ss_pred CCCCeEEEE-CCCHHHHHHHHHHHhCCC-CEEEEecCCC
Confidence 445789998 558999999999999995 8999998753
No 473
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=75.12 E-value=4.6 Score=38.15 Aligned_cols=36 Identities=28% Similarity=0.426 Sum_probs=30.0
Q ss_pred eEEEEcCCChhHHHHHHHHHHcCC-ceEEEEecCCCCc
Q 017760 13 TFLVTGGLGHVGSALCLELVRRGA-YQVRAFDLRTNSP 49 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~g~-~~V~~~dr~~~~~ 49 (366)
||.|.|+ |.+|+.++..|+.++. .+++++|+++...
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a 37 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVA 37 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchh
Confidence 5788987 9999999999998874 5799999976543
No 474
>PRK10537 voltage-gated potassium channel; Provisional
Probab=75.02 E-value=6.2 Score=38.66 Aligned_cols=49 Identities=18% Similarity=0.185 Sum_probs=33.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
+.+++|+ |.|-+|+.++++|.++| ++|++++.+.. +...+++.+++.||
T Consensus 240 k~HvII~-G~g~lg~~v~~~L~~~g-~~vvVId~d~~----~~~~~~g~~vI~GD 288 (393)
T PRK10537 240 KDHFIIC-GHSPLAINTYLGLRQRG-QAVTVIVPLGL----EHRLPDDADLIPGD 288 (393)
T ss_pred CCeEEEE-CCChHHHHHHHHHHHCC-CCEEEEECchh----hhhccCCCcEEEeC
Confidence 4578888 55789999999999999 48888875421 22223455566666
No 475
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=74.95 E-value=4.2 Score=38.19 Aligned_cols=34 Identities=24% Similarity=0.494 Sum_probs=29.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|+|.|. |.|.+|.++++.|.+.| ++|.+.||++.
T Consensus 1 M~Ig~I-GlG~mG~~la~~L~~~g-~~V~~~dr~~~ 34 (298)
T TIGR00872 1 MQLGLI-GLGRMGANIVRRLAKRG-HDCVGYDHDQD 34 (298)
T ss_pred CEEEEE-cchHHHHHHHHHHHHCC-CEEEEEECCHH
Confidence 368888 57999999999999999 59999998764
No 476
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=74.82 E-value=4.5 Score=38.54 Aligned_cols=35 Identities=40% Similarity=0.382 Sum_probs=29.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
+.+|||+||+|-+|+.+++-+...|+ .+++...++
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~ 177 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSS 177 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCH
Confidence 68999999999999999999999996 566665544
No 477
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=74.78 E-value=6.3 Score=36.13 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=28.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCce-EEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQ-VRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~-V~~~dr~~~ 47 (366)
+++|.|.|++|-+|+.+++.+.+..-.+ +-++++.++
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~ 39 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS 39 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 5789999999999999999999875224 455565543
No 478
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=74.45 E-value=5.3 Score=36.86 Aligned_cols=36 Identities=39% Similarity=0.421 Sum_probs=31.5
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++.+++|+|++|-+|..+++.+...|. +|+++++++
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~ 179 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSA 179 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCH
Confidence 457899999999999999999999995 898887654
No 479
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=74.43 E-value=3.9 Score=40.00 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=27.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
|+|.|. |+|++|..++..+. .| |+|+++|+++..
T Consensus 1 mkI~VI-GlGyvGl~~A~~lA-~G-~~VigvD~d~~k 34 (388)
T PRK15057 1 MKITIS-GTGYVGLSNGLLIA-QN-HEVVALDILPSR 34 (388)
T ss_pred CEEEEE-CCCHHHHHHHHHHH-hC-CcEEEEECCHHH
Confidence 368777 89999999997666 58 699999998643
No 480
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=74.36 E-value=4.8 Score=40.46 Aligned_cols=58 Identities=24% Similarity=0.212 Sum_probs=40.2
Q ss_pred cccccccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEc
Q 017760 4 SENEGIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQG 64 (366)
Q Consensus 4 ~~~~~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~g 64 (366)
+..+...+++|+|.| .|-.|.++++.|.++|. +|.+.|++.... .......++++..+
T Consensus 8 ~~~~~~~~~~v~v~G-~G~sG~a~a~~L~~~G~-~V~~~D~~~~~~-~~~l~~~gi~~~~~ 65 (473)
T PRK00141 8 SALPQELSGRVLVAG-AGVSGRGIAAMLSELGC-DVVVADDNETAR-HKLIEVTGVADIST 65 (473)
T ss_pred hhcccccCCeEEEEc-cCHHHHHHHHHHHHCCC-EEEEECCChHHH-HHHHHhcCcEEEeC
Confidence 334455678899996 77799999999999995 999999764322 11122346666655
No 481
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=74.34 E-value=4 Score=37.12 Aligned_cols=39 Identities=26% Similarity=0.418 Sum_probs=32.3
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..+..+|+|. |.|-+|+.+++.|.+.|..+++++|...-
T Consensus 21 ~L~~~~Vlvv-G~GglGs~va~~La~~Gvg~i~lvD~D~v 59 (240)
T TIGR02355 21 ALKASRVLIV-GLGGLGCAASQYLAAAGVGNLTLLDFDTV 59 (240)
T ss_pred HHhCCcEEEE-CcCHHHHHHHHHHHHcCCCEEEEEeCCcc
Confidence 3556789998 56779999999999999888999987653
No 482
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=74.31 E-value=5 Score=37.88 Aligned_cols=32 Identities=16% Similarity=0.283 Sum_probs=25.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEe
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFD 43 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~d 43 (366)
.+|.|.|++||.|..|++.|.+...-++..+.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~ 33 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIA 33 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEe
Confidence 47999999999999999999998633444443
No 483
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=74.22 E-value=2.9 Score=43.42 Aligned_cols=51 Identities=14% Similarity=0.292 Sum_probs=39.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCcccccccCCCeEEEEcc
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWSHLLINHGVHCIQGL 65 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~~~~~~~~v~~i~gD 65 (366)
..+|+|. |.|-+|+.+++.|.+.| ++++++|.++.. .+.....+...+.||
T Consensus 400 ~~~vII~-G~Gr~G~~va~~L~~~g-~~vvvID~d~~~--v~~~~~~g~~v~~GD 450 (601)
T PRK03659 400 KPQVIIV-GFGRFGQVIGRLLMANK-MRITVLERDISA--VNLMRKYGYKVYYGD 450 (601)
T ss_pred cCCEEEe-cCchHHHHHHHHHHhCC-CCEEEEECCHHH--HHHHHhCCCeEEEee
Confidence 3578887 68999999999999999 589999977643 233344677888888
No 484
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=74.13 E-value=5 Score=40.63 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=30.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
++|.|. |+|.+|+.++..|++.| ++|++.|+++..
T Consensus 5 ~kIavI-G~G~MG~~iA~~la~~G-~~V~v~D~~~~~ 39 (495)
T PRK07531 5 MKAACI-GGGVIGGGWAARFLLAG-IDVAVFDPHPEA 39 (495)
T ss_pred CEEEEE-CcCHHHHHHHHHHHhCC-CeEEEEeCCHHH
Confidence 578888 89999999999999999 599999997643
No 485
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=74.07 E-value=6.4 Score=35.49 Aligned_cols=36 Identities=14% Similarity=0.273 Sum_probs=27.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCC---ceEEEEecC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGA---YQVRAFDLR 45 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~---~~V~~~dr~ 45 (366)
|+.++|.|.| +|.+|++++..|.+.|. .++++.+++
T Consensus 2 m~~~kI~iIG-~G~mg~ala~~l~~~~~~~~~~i~~~~~~ 40 (245)
T PRK07634 2 LKKHRILFIG-AGRMAEAIFSGLLKTSKEYIEEIIVSNRS 40 (245)
T ss_pred CCCCeEEEEC-cCHHHHHHHHHHHhCCCCCcCeEEEECCC
Confidence 4567899996 79999999999998762 125566554
No 486
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=73.49 E-value=7.1 Score=35.18 Aligned_cols=33 Identities=36% Similarity=0.552 Sum_probs=28.1
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEE
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAF 42 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~ 42 (366)
.+++++|+|.| .|-+|+++++.|.+.|. +|+++
T Consensus 28 ~l~~~~v~I~G-~G~VG~~~a~~L~~~g~-~vv~v 60 (227)
T cd01076 28 GLAGARVAIQG-FGNVGSHAARFLHEAGA-KVVAV 60 (227)
T ss_pred CccCCEEEEEC-CCHHHHHHHHHHHHCCC-EEEEE
Confidence 35678999985 89999999999999996 78855
No 487
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=73.23 E-value=6.3 Score=31.36 Aligned_cols=29 Identities=28% Similarity=0.351 Sum_probs=25.1
Q ss_pred eEEEEcCCChhHHHHHHHHHHc-CCceEEEE
Q 017760 13 TFLVTGGLGHVGSALCLELVRR-GAYQVRAF 42 (366)
Q Consensus 13 ~VlITGgtGfiG~~L~~~L~~~-g~~~V~~~ 42 (366)
++.|+|++|.+|..+++.|.+. +. ++.++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~-~l~av 30 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDF-EVVAL 30 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCc-eEEEE
Confidence 5789999999999999999985 64 77777
No 488
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=73.06 E-value=6.8 Score=35.22 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=32.2
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCc--eEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAY--QVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~--~V~~~dr~~ 46 (366)
.+.++|+|.|+ |-.|+.++..|.+.|.. +|+.+||+.
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~g 61 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKG 61 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCC
Confidence 45679999966 88999999999999986 899999983
No 489
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=72.98 E-value=4.3 Score=36.47 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=31.9
Q ss_pred cccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 8 GIEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 8 ~~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
.....+|+|.| .|-+|+.+++.|...|..+++++|...
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 45567899985 778999999999999988899997654
No 490
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=72.93 E-value=6.1 Score=36.91 Aligned_cols=36 Identities=33% Similarity=0.342 Sum_probs=31.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
+.+|+|.|++|.+|..+++.+...|. +|+++++++.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~ 182 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKAD 182 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHH
Confidence 46899999999999999999999996 7988876653
No 491
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=72.87 E-value=7.3 Score=38.94 Aligned_cols=55 Identities=33% Similarity=0.436 Sum_probs=39.1
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCCccc---ccccCCCeEEEEcc
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNSPWS---HLLINHGVHCIQGL 65 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~~~~---~~~~~~~v~~i~gD 65 (366)
..+++|+|. |.|-.|.++++.|.+.|+ +|.+.|.++..... ..+...++.+..++
T Consensus 12 ~~~~~i~v~-G~G~sG~a~a~~L~~~G~-~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~ 69 (458)
T PRK01710 12 IKNKKVAVV-GIGVSNIPLIKFLVKLGA-KVTAFDKKSEEELGEVSNELKELGVKLVLGE 69 (458)
T ss_pred hcCCeEEEE-cccHHHHHHHHHHHHCCC-EEEEECCCCCccchHHHHHHHhCCCEEEeCC
Confidence 345788887 677899999999999995 99999987643211 12334466666554
No 492
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=72.72 E-value=6.5 Score=36.16 Aligned_cols=36 Identities=33% Similarity=0.338 Sum_probs=31.2
Q ss_pred cCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 10 EGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 10 ~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
++.+|+|+|++|-+|..+++.+...|. +|++++++.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~ 174 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSE 174 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCH
Confidence 457899999999999999999999996 788887653
No 493
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=72.52 E-value=5.8 Score=36.69 Aligned_cols=37 Identities=27% Similarity=0.390 Sum_probs=31.4
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
....+|+|. |.|-+|+++++.|.+.|..+++++|...
T Consensus 28 L~~s~VlVv-G~GGVGs~vae~Lar~GVg~itLiD~D~ 64 (268)
T PRK15116 28 FADAHICVV-GIGGVGSWAAEALARTGIGAITLIDMDD 64 (268)
T ss_pred hcCCCEEEE-CcCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence 456789998 6678999999999999987899998664
No 494
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed
Probab=72.39 E-value=6.5 Score=38.95 Aligned_cols=36 Identities=31% Similarity=0.491 Sum_probs=30.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCCC
Q 017760 11 GKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTNS 48 (366)
Q Consensus 11 ~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~~ 48 (366)
+++|+|. |+|.+|..++..|.++|. +|.+++.++..
T Consensus 2 ~~dVvVI-GGGlAGleAAlaLAr~Gl-~V~LiE~rp~~ 37 (436)
T PRK05335 2 MKPVNVI-GAGLAGSEAAWQLAKRGV-PVELYEMRPVK 37 (436)
T ss_pred CCcEEEE-CCCHHHHHHHHHHHhCCC-cEEEEEccCcc
Confidence 3578888 678999999999999995 89999976543
No 495
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=72.30 E-value=4.5 Score=34.03 Aligned_cols=30 Identities=37% Similarity=0.561 Sum_probs=27.2
Q ss_pred EEEEcCCChhHHHHHHHHHHcCCceEEEEec
Q 017760 14 FLVTGGLGHVGSALCLELVRRGAYQVRAFDL 44 (366)
Q Consensus 14 VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr 44 (366)
|+++|++.-+|++++..|.++|. +|..++.
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv-~V~m~~~ 30 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGV-QVVMLSK 30 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCC-EEEEecH
Confidence 68899999999999999999997 8999843
No 496
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=71.94 E-value=6.4 Score=37.34 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=28.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
|+|.|. |+|-+|++++..|.+.| ++|...+|++
T Consensus 1 MkI~Ii-GaGa~G~ala~~L~~~g-~~V~l~~r~~ 33 (326)
T PRK14620 1 MKISIL-GAGSFGTAIAIALSSKK-ISVNLWGRNH 33 (326)
T ss_pred CEEEEE-CcCHHHHHHHHHHHHCC-CeEEEEecCH
Confidence 368888 55999999999999999 6999998864
No 497
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=71.79 E-value=8.5 Score=35.90 Aligned_cols=37 Identities=30% Similarity=0.348 Sum_probs=32.9
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..+++++|.|.+..+|.-|+..|.++|. .|+....+.
T Consensus 157 l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T 193 (285)
T PRK10792 157 TYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT 193 (285)
T ss_pred CCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC
Confidence 4579999999999999999999999996 899987654
No 498
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=71.73 E-value=8.7 Score=36.38 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=31.5
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRT 46 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~ 46 (366)
..+++|.|. |.|-||+.+++.|...|. +|++.++..
T Consensus 134 l~g~tvgIv-G~G~IG~~vA~~l~afG~-~V~~~~~~~ 169 (312)
T PRK15469 134 REDFTIGIL-GAGVLGSKVAQSLQTWGF-PLRCWSRSR 169 (312)
T ss_pred cCCCEEEEE-CCCHHHHHHHHHHHHCCC-EEEEEeCCC
Confidence 457899888 899999999999999995 899998754
No 499
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=71.48 E-value=5.7 Score=37.27 Aligned_cols=34 Identities=26% Similarity=0.503 Sum_probs=29.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 12 KTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 12 ~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
|+|.|. |.|-+|+.+++.|.+.| ++|.+.|+++.
T Consensus 1 m~Ig~I-GlG~MG~~mA~~L~~~g-~~v~v~dr~~~ 34 (301)
T PRK09599 1 MQLGMI-GLGRMGGNMARRLLRGG-HEVVGYDRNPE 34 (301)
T ss_pred CEEEEE-cccHHHHHHHHHHHHCC-CeEEEEECCHH
Confidence 368887 69999999999999999 59999998864
No 500
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=71.33 E-value=7.2 Score=38.61 Aligned_cols=38 Identities=24% Similarity=0.487 Sum_probs=32.0
Q ss_pred ccCCeEEEEcCCChhHHHHHHHHHHcCCceEEEEecCCC
Q 017760 9 IEGKTFLVTGGLGHVGSALCLELVRRGAYQVRAFDLRTN 47 (366)
Q Consensus 9 ~~~~~VlITGgtGfiG~~L~~~L~~~g~~~V~~~dr~~~ 47 (366)
..+++|+|.|+ |-+|..+++.|...|..+|++.+|++.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ 217 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLE 217 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHH
Confidence 45689999965 999999999999999657999988753
Done!