BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017765
(366 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana
GN=ACX4 PE=1 SV=1
Length = 436
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/365 (81%), Positives = 327/365 (89%)
Query: 1 MTIHSSKHQDDVDKNARSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQ 60
M + SS + +K +SSYF+LP +++SVAFPQATPAS FPPC SDYY F+DLLT EEQ
Sbjct: 1 MAVLSSADRASNEKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSDYYHFNDLLTPEEQ 60
Query: 61 AVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGCPGHSVTGAAI 120
A+R KVRECMEKE+APIM EYWEKAEFPFH+ PKLGA+ VAGG+IKGYGCPG S+T AI
Sbjct: 61 AIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAI 120
Query: 121 AIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYG 180
A AEIARVDASCSTFILVHSSL MLTIALCGSE QK+KYLPSLAQLNT+ACWALTEP G
Sbjct: 121 ATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNG 180
Query: 181 SDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQINGYLVKKDAPGLT 240
SDAS L TTATKVEGGW + GQKRWIGNSTFAD+L+IFARNTTTNQING++VKKDAPGL
Sbjct: 181 SDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTTNQINGFIVKKDAPGLK 240
Query: 241 VTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
TKI NKIGLR+VQNGDILL+ VFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM
Sbjct: 241 ATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISM 300
Query: 301 GVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGH 360
G+YDMCHRYLKERKQFGAPLAAFQ+NQQKLVQMLGN+QAM L+GWRLCKLYE G MTPG
Sbjct: 301 GIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQ 360
Query: 361 ASLGK 365
ASLGK
Sbjct: 361 ASLGK 365
>sp|Q20772|GCDH_CAEEL Probable glutaryl-CoA dehydrogenase, mitochondrial
OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1
Length = 409
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 173/311 (55%), Gaps = 3/311 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D +Q D LT +E+++ + RE ++ + P + E + +F +IP++G++ + G +
Sbjct: 24 DAFQLSDQLTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLGAPYQ 83
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GYGC G S G + E+ RVD+ + + V +SL + I GSE+QKQKY+P LA
Sbjct: 84 GYGCAGTSTVGYGLIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASG 143
Query: 167 NTIACWALTEPAYGSDASALNTTAT--KVEGGWILEGQKRWIGNSTFADVLVIFARNTT- 223
I C+ LTEP +GS+ + T AT + + L G K WI NS +DV+V++AR+
Sbjct: 144 KKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKTWISNSPVSDVMVVWARSARH 203
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKV 283
N+I G+++++ GLT KIE K+ LR G I + V VP+E+ LP Q
Sbjct: 204 NNKIKGFILERGMKGLTTPKIEGKLSLRASITGQIAMDDVPVPEENLLPNAEGLQGPFGC 263
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L +R+ +AW +G + + + +Y +R+QFG PLA Q+ Q K+ ML I +
Sbjct: 264 LNNARLGIAWGALGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKMADMLTEISLGLQG 323
Query: 344 GWRLCKLYEKG 354
R+ +L ++G
Sbjct: 324 CLRVSRLKDEG 334
>sp|Q60759|GCDH_MOUSE Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh
PE=2 SV=2
Length = 438
Score = 181 bits (459), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 172/337 (51%), Gaps = 7/337 (2%)
Query: 34 QATPASKFPPCAS--DYYQFDDLLTSEEQAVRMKVRE-CMEKEIAPIMAEYWEKAEFPFH 90
Q PA P D ++ LT++E+ +R R C E+ ++ I+ + F
Sbjct: 37 QIRPAKSSRPVFDWKDPLILEEQLTADEKLIRDTFRNYCQERLMSRILLANRNEV-FHRD 95
Query: 91 VIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
++ ++G L V G TIKGYGC G S + E+ RVD+ + + V SSL M I
Sbjct: 96 IVYEMGELGVLGPTIKGYGCAGVSSVAYGLLTRELERVDSGYRSMMSVQSSLVMHPIYTY 155
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGN 208
GSEEQ+QKYLP LA+ + C+ LTEP +GSD + T A + L G K WI N
Sbjct: 156 GSEEQRQKYLPGLAKGELLGCFGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITN 215
Query: 209 STFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDE 268
S AD+ +++AR N I G++++K GL+ +IE K LR G I++ V VP+E
Sbjct: 216 SPVADLFIVWAR-CEDNCIRGFILEKGMRGLSAPRIEGKFSLRASATGMIIMDSVEVPEE 274
Query: 269 DRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQ 328
+ LP V+S L +R + W +G + +Y +R QFG PLA Q+ Q+
Sbjct: 275 NVLPNVSSLAGPFGCLNTARYGITWGVLGAAEFCLHTARQYALDRIQFGVPLARNQLVQK 334
Query: 329 KLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGK 365
KL ML I + +L +L ++ TP S+ K
Sbjct: 335 KLADMLTEITLGLHACLQLGRLKDQDKATPEMVSMLK 371
>sp|Q8HXX8|GCDH_MACFA Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis
GN=GCDH PE=2 SV=1
Length = 438
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 163/317 (51%), Gaps = 3/317 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
++ LT++E +R R ++ + P + F +I ++G L V G TIKGYGC
Sbjct: 56 LEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISQMGELGVLGPTIKGYGC 115
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G S + E+ RVD+ + + V S L M I GSEEQ+QKYLP LA+ +
Sbjct: 116 AGVSSVAYGLLARELERVDSGYRSAMSVQSPLVMHPIYAYGSEEQRQKYLPRLAKGELLG 175
Query: 171 CWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQIN 228
C+ LTEP GSD S++ T A + L G K WI NS AD+ V++AR +I
Sbjct: 176 CFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWAR-CEDGRIR 234
Query: 229 GYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSR 288
G+L++K GL+ +I+ K LR G I++ V VP+E+ LPG +S + L R
Sbjct: 235 GFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENMLPGASSLGGSFGCLNNGR 294
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+AW +G S +Y +R QFG PLA Q+ Q+KL ML I + +L
Sbjct: 295 YGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLG 354
Query: 349 KLYEKGAMTPGHASLGK 365
+L ++ P SL K
Sbjct: 355 RLKDQDKAAPEMVSLLK 371
>sp|Q92947|GCDH_HUMAN Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH
PE=1 SV=1
Length = 438
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 163/317 (51%), Gaps = 3/317 (0%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
++ LT++E +R R ++ + P + F +I ++G L V G TIKGYGC
Sbjct: 56 LEEQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKGYGC 115
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G S + E+ RVD+ + + V SSL M I GSEEQ+QKYLP LA+ +
Sbjct: 116 AGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLG 175
Query: 171 CWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQIN 228
C+ LTEP GSD S++ T A + L G K WI NS AD+ V++AR I
Sbjct: 176 CFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWAR-CEDGCIR 234
Query: 229 GYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVSR 288
G+L++K GL+ +I+ K LR G I++ V VP+E+ LPG +S L +R
Sbjct: 235 GFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSLGGPFGCLNNAR 294
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+AW +G S +Y +R QFG PLA Q+ Q+KL ML I + +L
Sbjct: 295 YGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLG 354
Query: 349 KLYEKGAMTPGHASLGK 365
+L ++ P SL K
Sbjct: 355 RLKDQDKAAPEMVSLLK 371
>sp|Q2KHZ9|GCDH_BOVIN Glutaryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=GCDH
PE=2 SV=1
Length = 438
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 165/321 (51%), Gaps = 3/321 (0%)
Query: 47 DYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK 106
D ++ LT++E +R R ++ + P + F +I ++G L + G TI+
Sbjct: 52 DPLLLEEQLTADEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGMLGPTIQ 111
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
GY C G S + E+ RVD+ + + V SSL M I GSEEQKQKYLP LA+
Sbjct: 112 GYSCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMYPIYAYGSEEQKQKYLPRLAKG 171
Query: 167 NTIACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT 224
+ C+ LTEP +GSD S + T A +IL G K WI NS AD+L+++AR
Sbjct: 172 ELLGCFGLTEPNHGSDPSGMETRARHNPSSRSYILSGSKTWITNSPVADLLIVWAR-CED 230
Query: 225 NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVL 284
+ I G+L++K GL+ +IE K LR G I++ V VP+E+ LPGV+ L
Sbjct: 231 SCIRGFLLEKGMRGLSTPRIEGKFSLRASSTGMIIMDDVEVPEENVLPGVSGLAGPFGCL 290
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + W +G + +Y +R QFG PLA Q+ Q+KL ML I +
Sbjct: 291 NNARYGITWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQKKLADMLTEITLGLHAC 350
Query: 345 WRLCKLYEKGAMTPGHASLGK 365
+L +L ++ P SL K
Sbjct: 351 LQLGRLKDQDKAAPEMVSLLK 371
>sp|P81140|GCDH_PIG Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa
GN=GCDH PE=1 SV=1
Length = 408
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 165/318 (51%), Gaps = 4/318 (1%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKGYGC 110
++ LT++E +R R ++ + P + F +I ++G L V G TIKGYGC
Sbjct: 25 LEEQLTADEILIRDTFRTYCQEHLMPRIVLANRNEVFHREIISEMGELGVLGPTIKGYGC 84
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ-KYLPSLAQLNTI 169
G S + E+ RVD+ + + V SSL M I GSEEQ+Q KYLP LA+ +
Sbjct: 85 AGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQQKYLPRLAKGELL 144
Query: 170 ACWALTEPAYGSDASALNTTA--TKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQI 227
C+ LTEP +GSD ++ T A + L G K WI NS AD+ V++AR N I
Sbjct: 145 GCFGLTEPNHGSDPGSMETRALHNPSNRSYTLNGAKTWITNSPVADLFVVWAR-CEDNCI 203
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSKVLAVS 287
G+L++K GL+ KIE K LR G I++ V VP+E+ LP +S L +
Sbjct: 204 RGFLLEKGMRGLSAPKIEGKFSLRASATGMIIMDDVEVPEENVLPKASSLAVPFGCLNNA 263
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R ++W +G + +Y +R QFG PLA Q+ Q+KL ML I + +L
Sbjct: 264 RYGISWGVLGAAEFCLHTARQYTLDRIQFGVPLAKNQLIQRKLADMLTEITLGLHACLQL 323
Query: 348 CKLYEKGAMTPGHASLGK 365
+L ++ +TP SL K
Sbjct: 324 GRLKDQDKVTPEMVSLLK 341
>sp|Q54R47|GCDH_DICDI Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=gcdh PE=3 SV=1
Length = 420
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 166/334 (49%), Gaps = 6/334 (1%)
Query: 31 AFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH 90
+F P KF +D + LLT EE +R +V + + E+ P + + +F
Sbjct: 27 SFGTIVPGDKFE--WNDPLSLESLLTEEEVMIRDQVNKFCQDELMPRIQMAYRDEKFDRE 84
Query: 91 VIPKLGALRVAGGTIKGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALC 150
++ + G + + G TI YG H G + + +VD+ + + V SSL M I
Sbjct: 85 IMREYGKMGMLGATIPAYGGVSHVAYG--LMANAVEKVDSGYRSAMSVQSSLVMHPINTF 142
Query: 151 GSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNS 209
G++ QK KYL LA + + C+ LTEP GSD + + T A K G ++L G K WI NS
Sbjct: 143 GTDAQKSKYLDGLASGDLVGCFGLTEPNAGSDPAGMQTRAVKNSAGNYVLNGTKTWITNS 202
Query: 210 TFADVLVIFARNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDED 269
ADV V++A+ I G++++K GL+ KIE K+ LR G I+++ V VP
Sbjct: 203 PIADVFVVWAK-VENGDIRGFVLEKGMKGLSAPKIEGKLSLRASITGMIVMEDVEVPPTA 261
Query: 270 RLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQK 329
P V + L +R + W +G + Y +Y +RKQFG PLAA Q+ Q+K
Sbjct: 262 MFPEVKGLRGPFSCLNKARYGIGWGSLGAAEFCYSTARQYGLDRKQFGKPLAANQLYQKK 321
Query: 330 LVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASL 363
L M I + +++ +L + G TP SL
Sbjct: 322 LADMATEISLGLQACYQVGRLIDAGKATPERISL 355
>sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC
PE=2 SV=3
Length = 379
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 167/317 (52%), Gaps = 7/317 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKA-EFPFHVIPKLGALRVAGGTI-KGYGCPG 112
+T E+ +R VR+ KEIAP AE EK EFPF +I K+G + G + + YG G
Sbjct: 3 VTQEQVMMRKMVRDFARKEIAP-AAEIMEKTDEFPFQLIKKMGKHGLMGIPVPEQYGGAG 61
Query: 113 HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACW 172
V +AI EI+R+ A+ + VH+S+ I G+EEQK KY+P+LA + + +
Sbjct: 62 ADVVSYILAIHEISRISAAVGVILSVHTSVGTNPILYFGNEEQKMKYIPNLASGDHLGAF 121
Query: 173 ALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFAR---NTTTNQING 229
ALTEP GSDA +L TTA K G ++L G K +I N AD+ + FA + + I+
Sbjct: 122 ALTEPHSGSDAGSLRTTAIKKNGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHGISA 181
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSR 288
++V+K+ PG TV K E K+GL +++ VP+ + L + F L V R
Sbjct: 182 FIVEKNTPGFTVGKKERKLGLYGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGR 241
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+ +A Q +GI+ + Y K+R QFG P+AA Q KL M +A + +
Sbjct: 242 IGIAAQALGIAEAALEHAVDYAKQRVQFGRPIAANQGISFKLADMATRAEAARHLVYHAA 301
Query: 349 KLYEKGAMTPGHASLGK 365
L+ +G AS+ K
Sbjct: 302 DLHNRGLNCGKEASMAK 318
>sp|P52042|ACDS_CLOAB Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=bcd PE=3 SV=1
Length = 379
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 143/275 (52%), Gaps = 5/275 (1%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT E++ VR VRE E E+ PI AE E FP + K+G + G K YG G
Sbjct: 5 LTREQELVRQMVREFAENEVKPIAAEIDETERFPMENVKKMGQYGMMGIPFSKEYGGAGG 64
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
V IA+ E+++V + + H+SL I G+EEQKQKYL LA+ I +
Sbjct: 65 DVLSYIIAVEELSKVCGTTGVILSAHTSLCASLINEHGTEEQKQKYLVPLAKGEKIGAYG 124
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQINGY 230
LTEP G+D+ A T A +++ G K +I N AD VIFA R T I+ +
Sbjct: 125 LTEPNAGTDSGAQQTVAVLEGDHYVINGSKIFITNGGVADTFVIFAMTDRTKGTKGISAF 184
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN-SFQDTSKVLAVSRV 289
+++K G ++ K+E K+G+R +++ + + VP E+ + F K L R+
Sbjct: 185 IIEKGFKGFSIGKVEQKLGIRASSTTELVFEDMIVPVENMIGKEGKGFPIAMKTLDGGRI 244
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQ 324
+A Q +GI+ G ++ Y+KERKQFG L FQ
Sbjct: 245 GIAAQALGIAEGAFNEARAYMKERKQFGRSLDKFQ 279
>sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acads PE=2 SV=2
Length = 412
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 155/302 (51%), Gaps = 7/302 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L Q +R R+ EKE+ PI A+ + FP + K+G L + + + G
Sbjct: 34 LPETHQMLRQTCRDFAEKELVPIAAQLDREHLFPTAQVKKMGELGLLAMDVPEELSGAGL 93
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+IA+ EI+R AS + V++SL + I GS +QKQ+++ + I C+A
Sbjct: 94 DYLAYSIALEEISRACASTGVIMSVNNSLYLGPILKFGSAQQKQQWITPFTNGDKIGCFA 153
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ---INGY 230
L+EP GSDA A +TTA + W+L G K WI NS A V+FA + Q I+ +
Sbjct: 154 LSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAF 213
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVNSFQDTSKVLAVSR 288
LV PGLT+ K E+K+G+R +++ + +P E+ L PG+ F+ + L + R
Sbjct: 214 LVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMG-FKIAMQTLDMGR 272
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+ +A Q +GI+ D +Y + R FGAPL Q Q KL M +++ L+ WR
Sbjct: 273 IGIASQALGIAQASLDCAVKYAENRNAFGAPLTKLQNIQFKLADMALALESARLLTWRAA 332
Query: 349 KL 350
L
Sbjct: 333 ML 334
>sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acads PE=1 SV=2
Length = 412
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 156/302 (51%), Gaps = 7/302 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L Q +R R+ EKE+ PI A+ ++ FP + K+G L + + + G
Sbjct: 34 LPETHQMLRQTCRDFAEKELVPIAAQLDKEHLFPTSQVKKMGELGLLAMDVPEELSGAGL 93
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+IA+ EI+R AS + V++SL + I GS +QKQ+++ + I C+A
Sbjct: 94 DYLAYSIALEEISRGCASTGVIMSVNNSLYLGPILKFGSSQQKQQWITPFTNGDKIGCFA 153
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ---INGY 230
L+EP GSDA A +TTA + W+L G K WI NS A V+FA + Q I+ +
Sbjct: 154 LSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAF 213
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVNSFQDTSKVLAVSR 288
LV PGLT+ K E+K+G+R +++ + +P E+ L PG+ F+ + L + R
Sbjct: 214 LVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMG-FKIAMQTLDMGR 272
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+ +A Q +GI+ D +Y + R FGAPL Q Q KL M +++ L+ WR
Sbjct: 273 IGIASQALGIAQASLDCAVKYAENRHAFGAPLTKLQNIQFKLADMALALESARLLTWRAA 332
Query: 349 KL 350
L
Sbjct: 333 ML 334
>sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo
abelii GN=ACADS PE=2 SV=1
Length = 412
Score = 152 bits (383), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 7/304 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L Q + R+ EKE+ PI A+ ++ FP + K+G L + + + G G
Sbjct: 34 LPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGL 93
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
AIA+ EI+R AS + V++SL + I GS+EQKQK++ + I C+A
Sbjct: 94 DYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSGDKIGCFA 153
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQINGY 230
L+EP GSDA A +TTA W+L G K WI N+ A V+FA R I+ +
Sbjct: 154 LSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAF 213
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVNSFQDTSKVLAVSR 288
LV PGLT+ K E+K+G+R +++ + +P + L PG+ F+ + L + R
Sbjct: 214 LVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMG-FKIAMQTLDMGR 272
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+ +A Q +GI+ D Y + R FGAPL Q+ Q KL M +++ L+ WR
Sbjct: 273 IGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAA 332
Query: 349 KLYE 352
L +
Sbjct: 333 MLKD 336
>sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADS PE=1 SV=1
Length = 412
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 159/320 (49%), Gaps = 12/320 (3%)
Query: 44 CASDYYQFDDLLTSEE-----QAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGAL 98
C + Q + S E Q + R+ EKE+ PI A+ ++ FP + K+G L
Sbjct: 18 CPRAWRQLHTIYQSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGL 77
Query: 99 RVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQ 157
+ + + G G AIA+ EI+R AS + V++SL + I GS+EQKQ
Sbjct: 78 GLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQ 137
Query: 158 KYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVI 217
++ + I C+AL+EP GSDA A +TTA W+L G K WI N+ A V+
Sbjct: 138 AWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVV 197
Query: 218 FA---RNTTTNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--P 272
FA R I+ +LV PGLT+ K E+K+G+R +++ + +P + L P
Sbjct: 198 FASTDRALQNKGISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEP 257
Query: 273 GVNSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQ 332
G+ F+ + L + R+ +A Q +GI+ D Y + R FGAPL Q+ Q KL
Sbjct: 258 GMG-FKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLAD 316
Query: 333 MLGNIQAMILVGWRLCKLYE 352
M +++ L+ WR L +
Sbjct: 317 MALALESARLLTWRAAMLKD 336
>sp|P63427|ACDP_MYCTU Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium
tuberculosis GN=fadE25 PE=3 SV=1
Length = 389
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 151/307 (49%), Gaps = 10/307 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L E +R +R EKEIAP AE EKA FP + L + I + YG G
Sbjct: 15 LPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFNAVHIPEEYGGQGA 74
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
I I E+ARVDAS S I + L + + L GSEE K++ LP+LA +A +A
Sbjct: 75 DSVATCIVIEEVARVDASAS-LIPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYA 133
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWI---GNSTFADVLVIFARNTTTNQINGY 230
L+E GSDA+++ T A WIL G K WI G ST+ V+ + + N I+ +
Sbjct: 134 LSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAF 193
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL---PGVNSFQDTSKVLAVS 287
+V KD G TV E K+G++ ++ + +P DR+ PG F+ L +
Sbjct: 194 MVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPG-DRIIGEPGTG-FKTALATLDHT 251
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R + Q +GI+ G D Y K+RKQFG ++ FQ Q L M ++A L+ +
Sbjct: 252 RPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVYSA 311
Query: 348 CKLYEKG 354
E+G
Sbjct: 312 AARAERG 318
>sp|P63428|ACDP_MYCBO Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE25 PE=3 SV=1
Length = 389
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 151/307 (49%), Gaps = 10/307 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L E +R +R EKEIAP AE EKA FP + L + I + YG G
Sbjct: 15 LPEEHDEMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFNAVHIPEEYGGQGA 74
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
I I E+ARVDAS S I + L + + L GSEE K++ LP+LA +A +A
Sbjct: 75 DSVATCIVIEEVARVDASAS-LIPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYA 133
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWI---GNSTFADVLVIFARNTTTNQINGY 230
L+E GSDA+++ T A WIL G K WI G ST+ V+ + + N I+ +
Sbjct: 134 LSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAF 193
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL---PGVNSFQDTSKVLAVS 287
+V KD G TV E K+G++ ++ + +P DR+ PG F+ L +
Sbjct: 194 MVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPG-DRIIGEPGTG-FKTALATLDHT 251
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R + Q +GI+ G D Y K+RKQFG ++ FQ Q L M ++A L+ +
Sbjct: 252 RPTIGAQAVGIAQGALDAAIAYTKDRKQFGESISTFQAVQFMLADMAMKVEAARLMVYSA 311
Query: 348 CKLYEKG 354
E+G
Sbjct: 312 AARAERG 318
>sp|P46703|ACDP_MYCLE Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae
(strain TN) GN=fadE25 PE=3 SV=1
Length = 389
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 153/310 (49%), Gaps = 16/310 (5%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI----KGYGC 110
L E +R +R EKEIAP A+ ++A FP L AL +G + YG
Sbjct: 15 LPEEHNELRATIRALAEKEIAPHAADVDQRARFPEEA---LAALNASGFNAIHVPEEYGG 71
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G A I I E+ARVDAS S V+ L + + L GSEE K++ LPSLA +A
Sbjct: 72 QGADSVAACIVIEEVARVDASASLIPAVNK-LGTMGLILRGSEELKKQVLPSLAAEGAMA 130
Query: 171 CWALTEPAYGSDASALNTTATKVEGGWILEGQKRWI---GNSTFADVLVIFARNTTTNQI 227
+AL+E GSDA+++ T A WIL G K WI G ST+ V+ + + N I
Sbjct: 131 SYALSEREAGSDAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGI 190
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL---PGVNSFQDTSKVL 284
+ ++V KD G ++ E K+G++ ++ K +P DR+ PG F+ L
Sbjct: 191 SAFIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIPG-DRIIGEPGTG-FKTALATL 248
Query: 285 AVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVG 344
+R + Q +GI+ G D Y K+RKQFG ++ FQ Q L M ++A L+
Sbjct: 249 DHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFMLADMAMKVEAARLIV 308
Query: 345 WRLCKLYEKG 354
+ E+G
Sbjct: 309 YAAAARAERG 318
>sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain
168) GN=yngJ PE=3 SV=1
Length = 380
Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 139/285 (48%), Gaps = 6/285 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
LT E+Q VR V++ +KEIAP + EFP K+G L + G + YG G
Sbjct: 5 LTKEQQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQTFKKMGELGLMGIPFPEEYGGSGG 64
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
A+A+ E+ + S SL + G+EEQKQ +L LA + +
Sbjct: 65 DTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFG 124
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA----RNTTTNQING 229
LTEP GSDA T A +++ G+K WI N+++A +++ A N I+
Sbjct: 125 LTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKNIISA 184
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPG-VNSFQDTSKVLAVSR 288
+V D PGLT+T +K+G+R +ILL+ V VP + L F+ L R
Sbjct: 185 LIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGDPTKGFKQFLYTLDGGR 244
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
+ +A +GI+ D Y KERKQFG P+++FQ Q KL M
Sbjct: 245 ISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADM 289
>sp|Q5RF40|ACDSB_PONAB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Pongo abelii GN=ACADSB PE=2 SV=1
Length = 432
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 169/354 (47%), Gaps = 21/354 (5%)
Query: 32 FPQATPASKFPPCASDYYQFDDLL---------------TSEEQAVRMKVRECMEKEIAP 76
FP + K PP S Q + LL T EE ++ V++ +++IAP
Sbjct: 19 FPTCLSSWKIPPHVSKSSQSEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAP 78
Query: 77 IMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTF 135
+++ E ++ VI L + G + YG G S + I E+A+VDAS + F
Sbjct: 79 LVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVF 138
Query: 136 ILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEG 195
+ ++L I G+EEQK YLP L + + L+E GSD+ AL T A K
Sbjct: 139 CEIQNTLINTLIRKHGTEEQKGTYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGD 197
Query: 196 GWILEGQKRWIGNSTFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRI 252
++L G K WI ++ A + ++ A T I +LV +D PGL + K ENK+GLR
Sbjct: 198 YYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRA 257
Query: 253 VQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLK 311
+ + V VP+ + L + + ++ L R+ +A Q +G++ G +D Y+K
Sbjct: 258 SSTCPLTFENVKVPETNILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIK 317
Query: 312 ERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGK 365
ER QFG L FQ Q ++ + ++A L+ + +L E G AS+ K
Sbjct: 318 ERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAK 371
>sp|O32176|FADE_BACSU Probable acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168)
GN=fadE PE=2 SV=1
Length = 594
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 156/304 (51%), Gaps = 9/304 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHV--IPKLGALRVAGGTI-KGYGCP 111
T E + + + +E+++ P + + E +F V + K G L + G + + YG
Sbjct: 30 FTDEHKMIAKTTEDYIEQDVLPHIDD-IENHQFEHSVRLLKKAGELGLLGADVPEEYGGL 88
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G +A+ + +R S S H + L I GSEEQK+KYLP LA IA
Sbjct: 89 GLDKISSALITEKFSRA-GSFSLSYGAHVGIGSLPIVFFGSEEQKKKYLPGLASGEKIAA 147
Query: 172 WALTEPAYGSDASALNTTATKVEGG--WILEGQKRWIGNSTFADVLVIFARNTTTNQING 229
+ALTEP GSDA TTA E G ++L G+K+WI NS FADV V++A+ ++ +
Sbjct: 148 YALTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAK-VDGDKFSA 206
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS-KVLAVSR 288
++V+K+ PG++ E K+G++ ++L + VP E+ L + + +L + R
Sbjct: 207 FIVEKEFPGVSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHVIAFNILNIGR 266
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+A IG S V ++ Y +R+QF P+A F + Q+K+ M + AM +R
Sbjct: 267 YKLAVGTIGASKRVIELSAAYANQRRQFKTPIAGFSLTQEKIGTMASRLYAMESSVYRTV 326
Query: 349 KLYE 352
L+E
Sbjct: 327 GLFE 330
>sp|P45954|ACDSB_HUMAN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADSB PE=1 SV=1
Length = 432
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 166/346 (47%), Gaps = 21/346 (6%)
Query: 40 KFPPCASDYYQFDDLL---------------TSEEQAVRMKVRECMEKEIAPIMAEYWEK 84
K PP S Q + LL T EE ++ V++ +++IAP+++ E
Sbjct: 27 KIPPHVSKSSQSEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDEN 86
Query: 85 AEFPFHVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLA 143
++ VI L + G + YG G S + I E+A+VDAS + F + ++L
Sbjct: 87 SKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLI 146
Query: 144 MLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQK 203
I G+EEQK YLP L + + L+E GSD+ AL T A K ++L G K
Sbjct: 147 NTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSK 205
Query: 204 RWIGNSTFADVLVIFARNTTT---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILL 260
WI ++ A + ++ A T I +LV +D PGL + K ENK+GLR +
Sbjct: 206 MWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTF 265
Query: 261 KKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAP 319
+ V VP+ + L + + ++ L R+ +A Q +G++ G +D Y+KER QFG
Sbjct: 266 ENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKR 325
Query: 320 LAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGK 365
L FQ Q ++ + ++A L+ + +L E G AS+ K
Sbjct: 326 LFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAK 371
>sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA
PE=2 SV=1
Length = 379
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 154/315 (48%), Gaps = 10/315 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI---KGYGCP 111
L+ E + +R VR+ + E+AP AE E+ F + ++ L + G I + YG
Sbjct: 5 LSEEHEMIRKLVRDFAKHEVAPTAAERDEQERFDRELFREMANLGLTG--IPWPEDYGGI 62
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G IA+ E+++V AS + H SL + G+EEQK +YL LA I
Sbjct: 63 GSDYLAYVIAVEELSKVCASTGVTLSAHISLCSWPLFAFGTEEQKTEYLTQLALGEKIGA 122
Query: 172 WALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING-- 229
+ALTE GSDA ++ TTA ++ ++L G K +I N AD+ ++FA + G
Sbjct: 123 FALTEAGSGSDAGSMKTTAERIGDDYVLNGSKVFITNGGVADIYIVFAVTDPEKKKKGVT 182
Query: 230 -YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL-PGVNSFQDTSKVLAVS 287
++V+KD G K E K+G+R +I+ + VP RL F+ K L
Sbjct: 183 AFIVEKDFEGFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRLGEEGEGFKIAMKTLDGG 242
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R +A Q +GI+ G D +Y KERKQFG +A Q KL M I+A L+ ++
Sbjct: 243 RNGIAAQAVGIAQGALDAALQYAKERKQFGKSIAEQQGIAFKLADMATMIEASRLLTYQA 302
Query: 348 CKLYEKGAMTPGHAS 362
L E + G AS
Sbjct: 303 AWL-ESSGLPYGKAS 316
>sp|Q3ZBF6|ACADS_BOVIN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADS PE=2 SV=1
Length = 412
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 159/318 (50%), Gaps = 7/318 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGH 113
L Q +R R+ EKE+ PI A+ ++ FP + K+G L + + + G
Sbjct: 34 LPETHQMLRQTCRDFAEKELFPIAAQVDKEHRFPAAQVKKMGELGLMAMNVPEELSGAGL 93
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+IA+ EI+R AS + V++SL + I G++EQKQ+++ + I C+A
Sbjct: 94 DYLAYSIAMEEISRGCASTGVIMSVNNSLYLGPILKFGTKEQKQQWVAPFTSGDKIGCFA 153
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQINGY 230
L+EP GSDA A TTA W+L G K WI N+ A +V+FA R+ I+ +
Sbjct: 154 LSEPGNGSDAGAAATTARADGDSWVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAF 213
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVNSFQDTSKVLAVSR 288
LV PGLT+ K E+K+G+R +++ + +P + L PG+ F+ + L R
Sbjct: 214 LVPMPTPGLTLGKKEDKLGIRASSTANLIFEDRRIPKDSLLGEPGLG-FKIAMQTLDTGR 272
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLC 348
+ +A Q +GI+ D Y + R FGAPL Q Q KL M +++ L+ WR
Sbjct: 273 IGIASQALGIAQAALDCAVTYAENRSAFGAPLTKLQAIQFKLADMALALESARLLTWRAA 332
Query: 349 KLYEKGAMTPGHASLGKV 366
L + A++ K+
Sbjct: 333 MLKDNKKPFTKEAAMAKL 350
>sp|Q54RR5|ACDSB_DICDI Probable short/branched chain specific acyl-CoA dehydrogenase
OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1
Length = 413
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 166/319 (52%), Gaps = 9/319 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGH 113
L+ EE ++ V +++ P++ E +E ++ L + + G I YG
Sbjct: 35 LSEEETLLKETVANFANEKVRPLVKVMDETSELNKGLLKDLFDMNLMGIDISDSYGGANM 94
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
+ G+ IAI E+A+VD + S + V ++L I GS +Q++KYL LA NT+ +
Sbjct: 95 NFMGSIIAIEELAKVDPAISVIVDVQNTLVNNCINRYGSIQQREKYLSMLAT-NTVGSFC 153
Query: 174 LTEPAYGSDASALNTTATK-VEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ----IN 228
L+E GSDA AL T A + +G ++L G K+WI N+ A V ++ A N +Q I
Sbjct: 154 LSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNAKEAGVFIVMA-NVDPSQGYKGIT 212
Query: 229 GYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVS 287
++V+ + PGL + K E+K+G+R +++L V D L + ++ + L
Sbjct: 213 AFIVESNNPGLRIGKKEDKLGIRASSTCEVILDNCVVKPTDILGELGRGYKIAIEGLNEG 272
Query: 288 RVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
R+ +A Q +G++ GV+D YL ERKQFG P+A FQ Q + +I+A L+ +
Sbjct: 273 RIGIAAQMLGLAQGVFDSTIPYLMERKQFGKPIATFQGMQFTYADLAVDIEAGRLLTYNA 332
Query: 348 CKLYEKGAMTPGHASLGKV 366
++ E G AS+ K+
Sbjct: 333 ARIKEAGLPFVFQASMAKL 351
>sp|P79273|ACADS_PIG Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADS PE=2 SV=1
Length = 413
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 151/299 (50%), Gaps = 7/299 (2%)
Query: 60 QAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGA 118
Q +R R+ EKE+ PI A+ ++ FP + K+G L + + + G
Sbjct: 39 QMLRQTCRDFAEKELVPIAAQVDKEHRFPEAQVKKMGELGLMAMDVPEELSGAGLDYLAY 98
Query: 119 AIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPA 178
IA+ EI+R AS + V++ L + I GS+EQKQ+++ + + C+AL+EP
Sbjct: 99 TIAMEEISRGCASTGVIMSVNNFLYLGPILKFGSKEQKQQWITPFTSGDKVGCFALSEPG 158
Query: 179 YGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQINGYLVKKD 235
GSDA A TTA W+L G K WI N+ A V+FA R+ I+ +LV
Sbjct: 159 NGSDAGAAATTAQADHDSWVLSGTKAWITNAWEASAAVVFASTDRSLQNKGISAFLVPMP 218
Query: 236 APGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVNSFQDTSKVLAVSRVMVAW 293
GLT+ K E+K+G+R +++ + +P E+ L PG+ F+ K L + R+ +A
Sbjct: 219 TAGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMG-FKIAMKTLDMGRIGIAS 277
Query: 294 QPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYE 352
+ +GIS D Y + R+ FG PL Q Q KL M +++ L+ WR L +
Sbjct: 278 KALGISQAALDCAVNYAENRRAFGVPLTKLQGIQFKLADMALALESARLLTWRAAMLKD 336
>sp|Q5EAD4|ACDSB_BOVIN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADSB PE=2 SV=1
Length = 432
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 166/346 (47%), Gaps = 11/346 (3%)
Query: 25 ALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEK 84
AL+ S + Q S PP A T EE ++ V++ ++++AP +++ E
Sbjct: 32 ALNSSQSEAQLKATSNGPPLAPL-----QTFTDEEMMIKSAVKKFAQEQVAPFVSKMDED 86
Query: 85 AEFPFHVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLA 143
++ VI L + G I YG G S + + I E+A+VDAS + + ++L
Sbjct: 87 SKMEKSVIQGLFQQGLMGIEIDTKYGGTGASFFSSVLVIEELAKVDASVALVCDIQNTLI 146
Query: 144 MLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQK 203
I G+EEQK YLP LA + ++E GSD+ A+ T A K +I+ G K
Sbjct: 147 NRMIGKYGTEEQKATYLPKLAT-EKASSICISETGAGSDSFAMKTRADKKGDYYIINGSK 205
Query: 204 RWIGNSTFADVLVIFARNTTTNQING---YLVKKDAPGLTVTKIENKIGLRIVQNGDILL 260
WI ++ A + V+ A + G +LV D GL V K ENK+G+R +
Sbjct: 206 MWISSAEIAGLFVVMANADFSAGYKGITCFLVDGDTEGLHVGKPENKLGIRASSTCPVTF 265
Query: 261 KKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAP 319
+ V VP + L V + ++ L R+ +A Q +G++ G +D Y+KERKQFG
Sbjct: 266 ENVKVPKTNILGQVGHGYKYAIGSLNEGRIGIAAQMLGVAQGCFDYTIPYIKERKQFGRR 325
Query: 320 LAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLGK 365
+ FQ Q ++ M ++A L+ + +L E G AS+ K
Sbjct: 326 VFDFQGLQHQVAHMATQLEAARLLTYNAARLLEAGRPMIKEASMAK 371
>sp|Q9FS88|IVD1_SOLTU Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum
GN=IVD1 PE=2 SV=1
Length = 412
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 157/319 (49%), Gaps = 13/319 (4%)
Query: 54 LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGTI-KGYGC 110
LL ++ + V + ++ IAP + FP ++ +G + G T + YG
Sbjct: 33 LLDDTQKQFKESVAKFAQENIAPYAEKIDRTNSFPKEINLWKLMGDFNLHGITAPEEYGG 92
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
IA+ EI+R + + V S++ + + G+ +QKQKYLP L + I
Sbjct: 93 LNLGYLYHCIALEEISRASGAVAVSYGVQSNVCINQLVRNGTPDQKQKYLPKLISGDHIG 152
Query: 171 CWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT---NQI 227
A++EP GSD ++ A +V+GG++L G K W N A+ L+++A+ TT I
Sbjct: 153 ALAMSEPNAGSDVVSMKCRADRVDGGYVLNGNKMWCTNGPVANTLIVYAKTDTTAGSKGI 212
Query: 228 NGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL----PGVNSFQDTSKV 283
++++K+ PG + + +K+G+R +++ + FVP E+ L GV
Sbjct: 213 TAFIIEKEMPGFSTAQKLDKLGMRGSDTCELVFENCFVPKENVLGQEGKGVYVLMSG--- 269
Query: 284 LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
L + R+++A P+GI D+ Y+++R+QFG P+ FQ+ Q KL M +Q+
Sbjct: 270 LDLERLVLAAGPVGIMQACMDIVIPYVRQREQFGRPIGEFQLIQGKLADMYTALQSSRSY 329
Query: 344 GWRLCKLYEKGAMTPGHAS 362
+ + K + G + P S
Sbjct: 330 VYAVAKDCDNGKIDPKDCS 348
>sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadsb PE=1 SV=1
Length = 432
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 158/316 (50%), Gaps = 6/316 (1%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG-YGCPGH 113
LT EE ++ V++ ++ +AP+++ E ++ VI L + G ++ YG
Sbjct: 57 LTDEEIMMKQTVKKFAQEHVAPLVSSMDENSKMEKSVIQGLFQQGLMGIEVEAQYGGTEA 116
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
S + + I E+A+VDAS + + +++ SEEQK YLP L + +
Sbjct: 117 SFFCSVLVIEELAKVDASVALLCDIQNTIINNLFRKHASEEQKATYLPKLVT-EKLGSFC 175
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING---Y 230
L+E GSD+ A+ T A K ++L G K WI ++ A++ ++FA ++ G +
Sbjct: 176 LSEAGAGSDSFAMKTRADKSGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITCF 235
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRV 289
LV +D G + K ENK+G+R + + V VP+ + L + + ++ L R+
Sbjct: 236 LVDRDTEGFQIGKRENKMGIRASSTCQLTFENVKVPETNILGKIGHGYKYAIGSLNEGRI 295
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
+A Q +G++ G +D Y+KER QFG + FQ Q ++ Q+ ++A L+ + +
Sbjct: 296 GIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAQVATQLEATRLLTYNAAR 355
Query: 350 LYEKGAMTPGHASLGK 365
L E G AS+ K
Sbjct: 356 LVEAGRPFIKEASMAK 371
>sp|Q9FS87|IVD2_SOLTU Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum
tuberosum GN=IVD2 PE=1 SV=1
Length = 401
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 118/224 (52%), Gaps = 4/224 (1%)
Query: 120 IAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAY 179
IA+ EI+R S H++L + + G+ EQKQKYLP L + A++EP
Sbjct: 91 IAMEEISRASGSVGLSYGAHTNLCINQLVRNGTHEQKQKYLPKLISGEHVGALAMSEPDA 150
Query: 180 GSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT---NQINGYLVKKDA 236
GSD ++ A +VEGG++L G K W N A LV++A+ T I ++++K
Sbjct: 151 GSDVVSMKCKADRVEGGYVLNGNKMWCTNGPTAQTLVVYAKTDVTASSKGITAFIIEKGM 210
Query: 237 PGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQP 295
G + + +K+G+R +++ + FVP+E+ L V L + R+++A P
Sbjct: 211 TGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQVGKGVYVLMSGLDLERLVLASGP 270
Query: 296 IGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+GI D+ Y+K+R+QFG P+ FQ Q K+ M ++Q+
Sbjct: 271 VGIMQACLDVVLPYVKQREQFGRPIGEFQFVQGKVADMYTSMQS 314
>sp|P12007|IVD_RAT Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ivd PE=1 SV=2
Length = 424
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 165/356 (46%), Gaps = 27/356 (7%)
Query: 17 RSSYFNLPALDISVAFPQATPASKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAP 76
R S + L L +A PQ A P D + L E++ +R + + +++ +AP
Sbjct: 11 RVSSWRLRPLPSPLAVPQR--AHSMLPVDDDI----NGLNEEQKQLRHTISKFVQENLAP 64
Query: 77 IMAEYWEKAEFP--FHVIPKLGALRVAGGTIK-GYGCPGHSVTGAAIAIAEIARVDASCS 133
E + +F +LG+L V G T YG G + + EI+R A+
Sbjct: 65 KAQEIDQSNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASAAVG 124
Query: 134 TFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKV 193
HS+L + I G+E QK+KYLP L I A++EP GSD ++ A K
Sbjct: 125 LSYGAHSNLCINQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMRLKAEKK 184
Query: 194 EGGWILEGQKRWIGNSTFADVLVIFARNTTT-----NQINGYLVKKDAPGLTVTKIENKI 248
++L G K WI N ADVLV++A+ T I ++V+KD PG + +K +K+
Sbjct: 185 GDHYVLNGNKFWITNGPDADVLVVYAKTDLTAVPASRGITAFIVEKDMPGFSTSKKLDKL 244
Query: 249 GLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTSK-------VLAVSRVMVAWQPIGISMG 301
G+R G + VF ++ ++P N SK L + R+++A P+GI
Sbjct: 245 GMR----GSNTCELVF--EDCKVPAANILSQESKGVYVLMSGLDLERLVLAGGPLGIMQA 298
Query: 302 VYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMT 357
V D YL R+ FG + FQ+ Q K+ M + A + + + ++G +T
Sbjct: 299 VLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMACRQYVYNVARACDEGHIT 354
>sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadsb PE=1 SV=1
Length = 432
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 156/316 (49%), Gaps = 6/316 (1%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIKG-YGCPGH 113
T E+ ++ V++ +++IAP+++ E ++ VI L + G ++ YG
Sbjct: 57 FTDEDIMMQKAVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGMMGIEVEAKYGGTEA 116
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
S + + I E+A+VDAS + + +++ G+EEQK YLP L + +
Sbjct: 117 SFLCSVLVIEELAKVDASVALLCDIQNTVINKLFRKHGTEEQKATYLPKLVT-EKLGSFC 175
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING---Y 230
L+E GSD+ AL T A K +++ G K WI N+ A++ ++FA + G +
Sbjct: 176 LSEAGAGSDSFALKTRADKSGNYYVINGSKMWISNAEHAELFLVFANVDPPSGYRGITCF 235
Query: 231 LVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRV 289
LV +D G + + ENK+G+R + + V VP+ L + + ++ L R+
Sbjct: 236 LVDRDTEGFQIGRRENKMGIRASSTCQLTFENVKVPETSVLGKIGHGYKYAIGSLNEGRI 295
Query: 290 MVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCK 349
+A Q +G++ G +D Y+KER QFG + FQ Q ++ + ++A L+ + +
Sbjct: 296 GIAAQMLGLAQGCFDYTIPYIKERMQFGKRIFDFQGLQHQVAHVATQLEAARLLTYNAAR 355
Query: 350 LYEKGAMTPGHASLGK 365
L E G AS+ K
Sbjct: 356 LVEAGRPFIKEASMAK 371
>sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1
SV=1
Length = 389
Score = 124 bits (312), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 20/293 (6%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFH-VIPKLGALRVAGGTI-KGYGCPG 112
L+ E Q ++ +VR + K+I P ++ + FP+ + +G L G I + YG G
Sbjct: 5 LSKELQMLQKEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEG 64
Query: 113 --HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
A I EIAR ++ + + TI GSE K+KY+P L+ +
Sbjct: 65 MDQGWLAAMIVTEEIARGSSALRVQLNMEVLGCAYTILTYGSEALKKKYVPKLSSAEFLG 124
Query: 171 CWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA---RNTTTNQI 227
+ +TEP GSD A+++TA W+L G K WI N+ ADVL+ +A + + +
Sbjct: 125 GFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDKAAGSRGL 184
Query: 228 NGYLVK-KDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVNSFQDTSKV- 283
+ ++++ ++ PG+ + +E K+G G++ L V VP E+ L PG D +++
Sbjct: 185 SAFVIEPRNFPGIKTSNLE-KLGSHASPTGELFLDNVKVPKENILGKPG-----DGARIV 238
Query: 284 ---LAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQM 333
L +R+ A +G++ D +Y ER+QFG P+ FQ+NQ + QM
Sbjct: 239 FGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQM 291
>sp|Q9SWG0|IVD_ARATH Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana
GN=IVD PE=1 SV=2
Length = 409
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 6/244 (2%)
Query: 120 IAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAY 179
IA+ EI+R S + HS+L + + G+ QK+KYLP L + A++EP
Sbjct: 99 IAMEEISRASGSVALSYGAHSNLCINQLVRNGTAAQKEKYLPKLISGEHVGALAMSEPNA 158
Query: 180 GSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT---TNQINGYLVKKDA 236
GSD + A KV+GG+IL G K W N A+ LV++A+ T + I ++++K
Sbjct: 159 GSDVVGMKCKAEKVDGGYILNGNKMWCTNGPSAETLVVYAKTDTKAGSKGITAFIIEKGM 218
Query: 237 PGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVNSFQDTSKVLAVSRVMVAWQ 294
G + + +K+G+R +++ + FVP+E+ L G + S L + R+++A
Sbjct: 219 TGFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYVLMSG-LDLERLVLAAG 277
Query: 295 PIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKG 354
P+GI D Y+++R+QFG P+ FQ Q K+ M +Q+ + + + + G
Sbjct: 278 PLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSYVYSVARDCDNG 337
Query: 355 AMTP 358
+ P
Sbjct: 338 KVDP 341
>sp|Q9JHI5|IVD_MOUSE Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd
PE=1 SV=1
Length = 424
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 153/324 (47%), Gaps = 23/324 (7%)
Query: 52 DDL--LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGTIK- 106
DD+ L E++ +R + + +++ +AP E + +F +LG+L V G T
Sbjct: 38 DDINGLNEEQKQLRHTISKFLQENLAPKAQEIDQTNDFKNLREFWKQLGSLGVLGITAPV 97
Query: 107 GYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQL 166
YG G + + EI+R + HS+L + I G+E QK+KYLP L
Sbjct: 98 QYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCVNQIVRNGNEAQKEKYLPKLISG 157
Query: 167 NTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-- 224
I A++EP GSD ++ A K ++L G K WI N AD+LV++A+ T
Sbjct: 158 EFIGALAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADILVVYAKTDLTAV 217
Query: 225 ---NQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNSFQDTS 281
I ++V+K PG + +K +K+G+R G + VF ++ ++P N S
Sbjct: 218 PASRGITAFIVEKGMPGFSTSKKLDKLGMR----GSNTCELVF--EDCKVPAANVLSQES 271
Query: 282 K-------VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQML 334
K L + R+++A P+GI V D YL R+ FG + FQ+ Q K+ M
Sbjct: 272 KGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMY 331
Query: 335 GNIQAMILVGWRLCKLYEKGAMTP 358
+ A + + K ++G + P
Sbjct: 332 TRLMASRQYVYNVAKACDEGHIIP 355
>sp|Q9VSA3|ACADM_DROME Probable medium-chain specific acyl-CoA dehydrogenase,
mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1
SV=1
Length = 419
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 162/354 (45%), Gaps = 21/354 (5%)
Query: 24 PALDISVAFPQATPA-SKFPPCASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYW 82
PAL V+ +A A S P + + +D L +E A R+ +EI P+ A+Y
Sbjct: 10 PALRQLVSQSRAYAAVSHVSPNGTSFALTEDQLQLQELA-----RKFTREEIIPVAAQYD 64
Query: 83 EKAEFPFHVIPKLGALRVAGGTIKG-YGCPGHSVTGAAIAIAEIARVDASCSTFI--LVH 139
+ E+P+ +I K L + I G V ++ E+A C+ + L
Sbjct: 65 KSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTTCLSAEELAY---GCTGIMTALEA 121
Query: 140 SSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGGWIL 199
S L + L G++EQK+KYL L + +A + +TEP GSD S + T A K W++
Sbjct: 122 SGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVI 181
Query: 200 EGQKRWIGNSTFADVLVIFARNT------TTNQINGYLVKKDAPGLTVTKIENKIGLRIV 253
GQK WI N A+ + AR + G++V++D+PGLT + E +G R
Sbjct: 182 NGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPGLTPGRKELNMGQRAS 241
Query: 254 QNGDILLKKVFVPDEDRLPGVNS-FQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKE 312
I + V VP E+ L G + F+ +R VA +G++ D +Y E
Sbjct: 242 DTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQRCLDEALKYALE 301
Query: 313 RKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKL-YEKGAMTPGHASLGK 365
RK FG P+A Q Q L M ++ L WRL ++G +AS+ K
Sbjct: 302 RKTFGVPIAYHQAVQFMLADMAIGVETSRLA-WRLSAWEIDQGRRNSYYASIAK 354
>sp|Q3SZI8|IVD_BOVIN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD
PE=2 SV=1
Length = 426
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 147/315 (46%), Gaps = 15/315 (4%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGTIK-GYGCP 111
L E++ +R V + +++ +AP E + EF +LG L V G T YG
Sbjct: 45 LNEEQKQLRQTVAKFLQEHLAPQAQEIDQSNEFKNLREFWKQLGNLGVLGITAPVQYGGS 104
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G + + EI+RV + HS+L + I G+E QK+KYLP L I
Sbjct: 105 GLGFLENVLVMEEISRVSGAVGLSYGAHSNLCINQIVRNGNETQKEKYLPKLISGEYIGA 164
Query: 172 WALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTT-----NQ 226
A++EP GSD ++ A K ++L G K WI N ADVLV++A+ T
Sbjct: 165 LAMSEPNAGSDVVSMKLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDVTAVPASRG 224
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL----PGVNSFQDTSK 282
I ++V+K PG + +K +K+G+R +++ + VP + L GV
Sbjct: 225 ITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELVFEDCEVPAANILGHLGKGVYVLMSG-- 282
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
L + R+++A P+GI V D YL R+ FG + FQ+ Q K+ M + A
Sbjct: 283 -LDLERLVLAGGPLGIMQAVLDHTIPYLHMREAFGQKIGHFQLMQGKMADMYTRLMACRQ 341
Query: 343 VGWRLCKLYEKGAMT 357
+ + K ++G T
Sbjct: 342 YVYNVAKACDEGHCT 356
>sp|Q54IM8|ACAD8_DICDI Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=acad8 PE=3 SV=1
Length = 416
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 140/291 (48%), Gaps = 8/291 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAE-FPFHVIPKLGALRVAGGTIK-GYGCPG 112
LT +++ + + ++++ P AE W+K E FP V+ + L G ++ G G
Sbjct: 39 LTEDQKQFQSMALDFAQEKMKPF-AEKWDKEEYFPRDVMREAAELGFGGIYVREDVGGSG 97
Query: 113 HSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACW 172
S A+I I +A D S + FI +H+ A L I + G+EEQ++K+LPSL + IA +
Sbjct: 98 LSRLDASIIIEALASADVSTTAFISIHNMCAGL-IDIYGTEEQRKKFLPSLVSMEKIASY 156
Query: 173 ALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQING--- 229
LTEP GSDA +L+T ATK +IL G K +I ++V ++ R G
Sbjct: 157 CLTEPGSGSDAGSLSTKATKDGDHYILNGSKAFISGGGDSEVYLVMVRTGAEKGPKGISC 216
Query: 230 YLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSR 288
LV+KD PGL+ K E K+G ++ + VP + + F L R
Sbjct: 217 LLVEKDTPGLSFGKKEEKLGWNTQPTRALIFEDCRVPVGNLIGKEGQGFSIAMNALNGGR 276
Query: 289 VMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
+ + +G + ++K RKQF PL FQ Q K+ M + A
Sbjct: 277 INIGACSLGGAQSCLVAARDHVKVRKQFNQPLEHFQAVQFKMADMATKLHA 327
>sp|Q8JZN5|ACAD9_MOUSE Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus
musculus GN=Acad9 PE=2 SV=2
Length = 625
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 135/262 (51%), Gaps = 12/262 (4%)
Query: 83 EKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
++ + P + KL +L + G + + YG G S T A + EI +DAS + + H +
Sbjct: 93 QEGKIPVDTLEKLKSLGLFGIQVPEEYGGLGLSNTMYA-RLGEIISLDASITVTLAAHQA 151
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG--WIL 199
+ + I L G+EEQK KYLP L+ IA + LTEPA GSDA+++ T AT E +IL
Sbjct: 152 IGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYFIL 211
Query: 200 EGQKRWIGNSTFADVLVIFARN-------TTTNQINGYLVKKDAPGLTVTKIENKIGLRI 252
G K WI N A++ +FA+ + T+++ ++V++D G+T K E+K+G+R
Sbjct: 212 NGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKMTAFIVERDFGGITNGKPEDKLGIRG 271
Query: 253 VQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLK 311
++ + VP E+ L V F+ +L R + G+ + ++ Y
Sbjct: 272 SNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAGMLKKLIELTAEYAC 331
Query: 312 ERKQFGAPLAAFQINQQKLVQM 333
RKQF L+ F + Q+K M
Sbjct: 332 TRKQFNRNLSEFGLIQEKFALM 353
>sp|Q5RBD5|IVD_PONAB Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD
PE=2 SV=1
Length = 423
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 145/312 (46%), Gaps = 9/312 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGTIK-GYGCP 111
L+ E++ +R V + +++ +AP E EF +LG L V G T YG
Sbjct: 42 LSEEQRQLRQTVAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGS 101
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G + + EI+R + HS+L + + G+E QK+KYLP L I
Sbjct: 102 GLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGA 161
Query: 172 WALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT-----TTNQ 226
A++EP GSD ++ A K +IL G K WI N ADVL+++A+ +
Sbjct: 162 LAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRG 221
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN-SFQDTSKVLA 285
I ++V+K PG + +K +K+G+R +++ + VP + L N L
Sbjct: 222 ITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKVPAANILGHENKGVYVLMSGLD 281
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+ R+++A P+G+ V D YL R+ FG + FQ+ Q K+ M + A +
Sbjct: 282 LERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVY 341
Query: 346 RLCKLYEKGAMT 357
+ K ++G T
Sbjct: 342 NVAKACDEGHCT 353
>sp|Q9H845|ACAD9_HUMAN Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo
sapiens GN=ACAD9 PE=1 SV=1
Length = 621
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 12/262 (4%)
Query: 83 EKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSS 141
++ + P + KL +L + G + + YG G S T + + EI +D S + + H +
Sbjct: 89 QEGKIPDETLEKLKSLGLFGLQVPEEYGGLGFSNTMYS-RLGEIISMDGSITVTLAAHQA 147
Query: 142 LAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATKVEGG--WIL 199
+ + I L G+EEQK KYLP LA IA + LTEPA GSDA+++ + AT E +IL
Sbjct: 148 IGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSRATLSEDKKHYIL 207
Query: 200 EGQKRWIGNSTFADVLVIFARN-------TTTNQINGYLVKKDAPGLTVTKIENKIGLRI 252
G K WI N A++ +FA+ + ++I ++V++D G+T K E+K+G+R
Sbjct: 208 NGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDKITAFIVERDFGGVTNGKPEDKLGIRG 267
Query: 253 VQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLK 311
++ + +P E+ L V + F+ +L R + G+ + +M Y
Sbjct: 268 SNTCEVHFENTKIPVENILGEVGDGFKVAMNILNSGRFSMGSVVAGLLKRLIEMTAEYAC 327
Query: 312 ERKQFGAPLAAFQINQQKLVQM 333
RKQF L+ F + Q+K M
Sbjct: 328 TRKQFNKRLSEFGLIQEKFALM 349
>sp|P26440|IVD_HUMAN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD
PE=1 SV=1
Length = 423
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 145/312 (46%), Gaps = 9/312 (2%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFP--FHVIPKLGALRVAGGTIK-GYGCP 111
L+ E++ +R + + +++ +AP E EF +LG L V G T YG
Sbjct: 42 LSEEQRQLRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGS 101
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G + + EI+R + HS+L + + G+E QK+KYLP L I
Sbjct: 102 GLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGA 161
Query: 172 WALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT-----TTNQ 226
A++EP GSD ++ A K +IL G K WI N ADVL+++A+ +
Sbjct: 162 LAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRG 221
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN-SFQDTSKVLA 285
I ++V+K PG + +K +K+G+R +++ + +P + L N L
Sbjct: 222 ITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLD 281
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGW 345
+ R+++A P+G+ V D YL R+ FG + FQ+ Q K+ M + A +
Sbjct: 282 LERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVY 341
Query: 346 RLCKLYEKGAMT 357
+ K ++G T
Sbjct: 342 NVAKACDEGHCT 353
>sp|Q9D7B6|ACAD8_MOUSE Isobutyryl-CoA dehydrogenase, mitochondrial OS=Mus musculus
GN=Acad8 PE=2 SV=2
Length = 413
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 141/297 (47%), Gaps = 10/297 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGH 113
L E++ + + +E+AP MAE+ +K FP V+ K L G ++ G G
Sbjct: 39 LNEEQKGFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYVRTDVGGSGL 98
Query: 114 SVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWA 173
S ++ +A S + +I +H+ A + + G+EEQ+ K+ P L + A +
Sbjct: 99 SRLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSF-GNEEQRHKFCPPLCTMEKFASYC 157
Query: 174 LTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN--TTTNQINGYL 231
LTEP GSDA++L T+A + +IL G K +I +D+ V+ R + I+ +
Sbjct: 158 LTEPGSGSDAASLLTSAKQQGDHYILNGSKAFISGGGESDIYVVMCRTGGSGAKGISCIV 217
Query: 232 VKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVM 290
V+K PGL+ K E K+G ++ + VP +R+ F K L R+
Sbjct: 218 VEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRIN 277
Query: 291 VAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRL 347
VA +G + + +LK RKQFGAPLA Q Q +L M A LV RL
Sbjct: 278 VASCSLGAAHASVILTQEHLKVRKQFGAPLARSQYLQFQLADM-----ATKLVASRL 329
>sp|Q06319|ACDS_MEGEL Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera
elsdenii PE=1 SV=1
Length = 383
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 142/294 (48%), Gaps = 9/294 (3%)
Query: 55 LTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK----GYGC 110
LT +Q + EK++AP + E K + +I +L +L + G + G G
Sbjct: 5 LTDIQQDFLKLAHDFGEKKLAPTVTERDHKGIYDKELIDELLSLGITGAYFEEKYGGSGD 64
Query: 111 PGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIA 170
G V +A+ E+A+ DA + + SL I G+E QK+K+L L + +
Sbjct: 65 DGGDVLSYILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLG 124
Query: 171 CWALTEPAYGSDASALNTTATKVEGG-WILEGQKRWIGNSTFADVLVIFA---RNTTTNQ 226
+ LTEP G+DAS T ATK + G + L G K +I N AD+ ++FA ++ +
Sbjct: 125 AFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKSKGNHG 184
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL-PGVNSFQDTSKVLA 285
I ++++ PG T K E+K+G+ Q +++ + V VP E+ L F+ L
Sbjct: 185 ITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLD 244
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQA 339
R+ VA Q +GI+ Y K+R QFG PL FQ KL M I+A
Sbjct: 245 GGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEA 298
>sp|Q0NXR6|ACAD8_BOVIN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACAD8
PE=2 SV=1
Length = 416
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 136/292 (46%), Gaps = 6/292 (2%)
Query: 57 SEEQAVRMKVR-ECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGHS 114
SEEQ KV +E+AP MAE+ +K FP + K L G ++ G G S
Sbjct: 43 SEEQKEFQKVAFNFAAREMAPHMAEWDQKELFPVDTMRKAAQLGFGGVYVQTDVGGAGLS 102
Query: 115 VTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWAL 174
+I +A S + ++ +H ++ + I GSEEQ+ + P L + A + L
Sbjct: 103 RLDTSIIFEALATGCTSTTAYMSIH-NMCVWIIDRFGSEEQRHRLCPPLCTMEKFASYCL 161
Query: 175 TEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN--QINGYLV 232
TEP GSDA++L T+A + +IL G K +I AD+ V+ R I+ +V
Sbjct: 162 TEPGSGSDAASLMTSAVRQHDHYILNGSKAFISGGGEADIYVVMCRTGGPGPRGISCVVV 221
Query: 233 KKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMV 291
+K PGL+ K E K+G ++ + VP +R+ F K L R+ V
Sbjct: 222 EKGTPGLSFGKKEKKVGWNSQPTQAVIFEDCAVPVANRIGDEGQGFLIAMKGLNGGRINV 281
Query: 292 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
A +G + + YLK RKQFG PLA Q Q +L M + A L+
Sbjct: 282 ASCSLGAAHASIVLARDYLKVRKQFGEPLANSQYLQFQLADMAARLVASRLM 333
>sp|P45952|ACADM_MOUSE Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadm PE=1 SV=1
Length = 421
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 146/323 (45%), Gaps = 9/323 (2%)
Query: 51 FDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYG 109
F LT +++ + R+ +EI P+ EY + E+PF +I + L + I + G
Sbjct: 37 FSFELTEQQKEFQATARKFAREEIIPVAPEYDKSGEYPFPLIKRAWELGLINAHIPESCG 96
Query: 110 CPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTI 169
G A + E+A T I +S L + + L G+++QK+KYL + + +
Sbjct: 97 GLGLGTFDACLITEELAYGCTGVQTAIEANS-LGQMPVILAGNDQQKKKYLGRMTEQPMM 155
Query: 170 ACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNT------T 223
+ +TEP+ GSD +A+ T A K +++ GQK WI N A+ + AR+
Sbjct: 156 CAYCVTEPSAGSDVAAIKTKAEKKGDEYVINGQKMWITNGGKANWYFLLARSNPDPKVPA 215
Query: 224 TNQINGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVNS-FQDTSK 282
+ G++V+ D PG+ + K E +G R I + V VP E+ L G + F+
Sbjct: 216 SKAFTGFIVEADTPGIHIGKKELNMGQRCSDTRGIAFEDVRVPKENVLIGEGAGFKIAMG 275
Query: 283 VLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMIL 342
+R VA +G++ D +Y +RK FG L Q L +M ++ L
Sbjct: 276 AFDRTRPTVAAGAVGLAQRALDEATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARL 335
Query: 343 VGWRLCKLYEKGAMTPGHASLGK 365
R + G +AS+ K
Sbjct: 336 SYQRAAWEVDSGRRNTYYASIAK 358
>sp|P79274|ACADL_PIG Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADL PE=2 SV=1
Length = 430
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 139/292 (47%), Gaps = 10/292 (3%)
Query: 54 LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKA-EFPFHVIPKLGALRVAGGTI-KGYGCP 111
+ +SE R VR+ ++E+ P AE WEKA E + K G + G I + +G
Sbjct: 52 IFSSEHDIFRESVRKFFQEEVIPHHAE-WEKAGEVSRELWEKAGKQGLLGINIAERHGGI 110
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G + AAI E A + + F L HS + M IA GSEEQ + ++P + I
Sbjct: 111 GGDLYSAAIVWEEQAYSNCTGPGFSL-HSDIVMPYIANYGSEEQIKHFIPQMTAGKCIGA 169
Query: 172 WALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFA-----RNTTTNQ 226
A+TEP GSD + T A K WIL G K +I N +DV+++ A + +
Sbjct: 170 IAMTEPGAGSDLQGVRTNAKKDGSDWILNGSKVFITNGWLSDVVIVVAVTNREARSPAHG 229
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN-SFQDTSKVLA 285
I+ +LV+ G + +KIGL+ ++ + V +P L N F + L
Sbjct: 230 ISLFLVENGMKGFVKGRKLHKIGLKAQDTAELFFEDVRLPASALLGEENKGFYYLMQELP 289
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
R+++A + S +++ Y+K+RK FG +A Q Q KL ++ +I
Sbjct: 290 QERLLIAELAVSASEFMFEETRNYVKQRKAFGKTVAHIQTVQHKLAELKTHI 341
>sp|Q22347|ACADM_CAEEL Probable medium-chain specific acyl-CoA dehydrogenase 10,
mitochondrial OS=Caenorhabditis elegans GN=acdh-10 PE=2
SV=1
Length = 417
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 11/301 (3%)
Query: 74 IAPIMAEYWEKAEFPFHVIPKLGALRVAGGTI-KGYGCPGHSVTGAAIAIAEIARVDASC 132
+ P A++ E EFP+ ++ + +L + I + YG PG + A+ I E +
Sbjct: 50 LVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGPGMTTLETAL-IVEALSYGCTG 108
Query: 133 STFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWALTEPAYGSDASALNTTATK 192
++ SLA+ + + G+EEQK+KYL +LA IA + +TEP GSD + + T K
Sbjct: 109 IQLGIMGPSLAIAPVYISGNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEK 168
Query: 193 VEGGWILEGQKRWIGNSTFADVLVIFARNTTTNQ------INGYLVKKDAPGLTVTKIEN 246
+I+ G K WI A + AR+ + ++V D PG+T K E
Sbjct: 169 KGDEYIINGSKAWITGGGHAKWFFVLARSDPNPKTPAGKAFTAFIVDGDTPGITRGKKEK 228
Query: 247 KIGLRIVQNGDILLKKVFVPDEDRL--PGVNSFQDTSKVLAVSRVMVAWQPIGISMGVYD 304
+G R I + V VP E+ L PG F+ + ++R VA +G+S D
Sbjct: 229 NMGQRCSDTRVITFEDVRVPAENVLGAPGAG-FKVAMEAFDMTRPGVAAGALGLSWRCLD 287
Query: 305 MCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILVGWRLCKLYEKGAMTPGHASLG 364
+Y ERK FG +A Q Q L M N++ L+ ++ + + +AS+
Sbjct: 288 ESAKYALERKAFGTVIANHQAVQFMLADMAVNLELARLITYKSANDVDNKVRSSYNASIA 347
Query: 365 K 365
K
Sbjct: 348 K 348
>sp|P28330|ACADL_HUMAN Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADL PE=2 SV=2
Length = 430
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 137/292 (46%), Gaps = 10/292 (3%)
Query: 54 LLTSEEQAVRMKVRECMEKEIAPIMAEYWEKA-EFPFHVIPKLGALRVAGGTIKGY-GCP 111
+ + E R VR+ ++E+ P +E WEKA E V K G + G I + G
Sbjct: 52 IFSPEHDIFRKSVRKFFQEEVIPHHSE-WEKAGEVSREVWEKAGKQGLLGVNIAEHLGGI 110
Query: 112 GHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIAC 171
G + AAI E A + S F +HS + M I GSEEQ + ++P + I
Sbjct: 111 GGDLYSAAIVWEEQAYSNCSGPGFS-IHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGA 169
Query: 172 WALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARN-----TTTNQ 226
A+TEP GSD + T A K WIL G K +I N + +DV+++ A + +
Sbjct: 170 IAMTEPGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAHG 229
Query: 227 INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGVN-SFQDTSKVLA 285
I+ +LV+ G + +K+GL+ ++ + + +P L N F K L
Sbjct: 230 ISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGEENKGFYYIMKELP 289
Query: 286 VSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNI 337
R+++A I S +++ Y+K+RK FG +A Q Q KL ++ +I
Sbjct: 290 QERLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHI 341
>sp|Q9UKU7|ACAD8_HUMAN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens
GN=ACAD8 PE=1 SV=1
Length = 415
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 139/292 (47%), Gaps = 6/292 (2%)
Query: 57 SEEQAVRMKVR-ECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGTIK-GYGCPGHS 114
+EEQ KV + +E+AP MAE+ +K FP V+ K L G I+ G G S
Sbjct: 42 NEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLS 101
Query: 115 VTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSLAQLNTIACWAL 174
++ +A S + +I +H+ A + + G+EEQ+ K+ P L + A + L
Sbjct: 102 RLDTSVIFEALATGCTSTTAYISIHNMCAWMIDSF-GNEEQRHKFCPPLCTMEKFASYCL 160
Query: 175 TEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTTTN--QINGYLV 232
TEP GSDA++L T+A K +IL G K +I + +D+ V+ R I+ +V
Sbjct: 161 TEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTGGPGPKGISCIVV 220
Query: 233 KKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRLPGV-NSFQDTSKVLAVSRVMV 291
+K PGL+ K E K+G ++ + VP +R+ F + L R+ +
Sbjct: 221 EKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINI 280
Query: 292 AWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLGNIQAMILV 343
A +G + + +L RKQFG PLA+ Q Q L M + A L+
Sbjct: 281 ASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLM 332
>sp|A8XNF0|ACAD1_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 1,
mitochondrial OS=Caenorhabditis briggsae GN=CBG15946
PE=3 SV=1
Length = 417
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 151/330 (45%), Gaps = 11/330 (3%)
Query: 45 ASDYYQFDDLLTSEEQAVRMKVRECMEKEIAPIMAEYWEKAEFPFHVIPKLGALRVAGGT 104
AS Q L+ ++ ++ + ++ + P A++ E EFP+ ++ + +L +
Sbjct: 21 ASQSRQISFDLSDTQKEIQAAALKFSKEVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQ 80
Query: 105 I-KGYGCPGHSVTGAAIAIAEIARVDASCSTFILVHSSLAMLTIALCGSEEQKQKYLPSL 163
I + YG PG + A+ I E + ++ SLA+ + + G+EEQK+KYL +L
Sbjct: 81 IPEKYGGPGMTTLETAL-IVEALSYGCTGLQLGIMGPSLAIAPVYIAGNEEQKKKYLGAL 139
Query: 164 AQLNTIACWALTEPAYGSDASALNTTATKVEGGWILEGQKRWIGNSTFADVLVIFARNTT 223
A IA + +TEP GSD + + T K +I+ G K WI A + AR+ +
Sbjct: 140 AAEPIIASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWITGGGHAKWFFVLARSDS 199
Query: 224 TNQ------INGYLVKKDAPGLTVTKIENKIGLRIVQNGDILLKKVFVPDEDRL--PGVN 275
+ ++V D PG++ K E +G R I + V VP E+ L PG
Sbjct: 200 DPKAPAGKAFTAFIVDGDTPGISRGKKEKNMGQRCSDTRTITFEDVRVPAENVLGAPGAG 259
Query: 276 SFQDTSKVLAVSRVMVAWQPIGISMGVYDMCHRYLKERKQFGAPLAAFQINQQKLVQMLG 335
F+ ++R VA +G++ D +Y +RK FG +A Q Q L M
Sbjct: 260 -FKVAMGAFDMTRPGVAAGALGLAWRCLDESAKYALQRKAFGTEIANHQAVQFMLADMAV 318
Query: 336 NIQAMILVGWRLCKLYEKGAMTPGHASLGK 365
N++ L+ ++ + + +AS+ K
Sbjct: 319 NLELARLITYKSATDVDNKVRSSYNASIAK 348
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,549,673
Number of Sequences: 539616
Number of extensions: 5132301
Number of successful extensions: 11277
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 10867
Number of HSP's gapped (non-prelim): 184
length of query: 366
length of database: 191,569,459
effective HSP length: 119
effective length of query: 247
effective length of database: 127,355,155
effective search space: 31456723285
effective search space used: 31456723285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)