BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017767
         (366 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1U3I|A Chain A, Crystal Structure Of Glutathione S-Tranferase From
           Schistosoma Mansoni
          Length = 211

 Score = 30.8 bits (68), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 199 FEEGPYVFPNTSWGVLIPPNIEDDHSPLPGWMIESLKAVKYIDSDHF 245
           F++ P + P    G L    + DDH  +  WM+ESL   +Y+   H 
Sbjct: 38  FQDWPKIKPTIPGGRLPAVKVTDDHGHVK-WMLESLAIARYMAKKHH 83


>pdb|2F8F|A Chain A, Crystal Structure Of The Y10f Mutant Of The Gluathione
           S-Transferase From Schistosoma Haematobium
 pdb|2F8F|B Chain B, Crystal Structure Of The Y10f Mutant Of The Gluathione
           S-Transferase From Schistosoma Haematobium
          Length = 211

 Score = 29.6 bits (65), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 199 FEEGPYVFPNTSWGVLIPPNIEDDHSPLPGWMIESLKAVKYIDSDH 244
           F++ P + P    G L    I D+H  +  WM+ESL   +Y+   H
Sbjct: 38  FQDWPKIKPTIPGGRLPAVKITDNHGHVK-WMVESLAIARYMAKKH 82


>pdb|1OE7|A Chain A, 28kda Glutathione S-Transferase From Schistosoma
           Haematobium
 pdb|1OE7|B Chain B, 28kda Glutathione S-Transferase From Schistosoma
           Haematobium
 pdb|1OE8|A Chain A, 28kda Glutathione S-transferase From Schistosoma
           Haematobium (glutathione Saturated)
 pdb|1OE8|B Chain B, 28kda Glutathione S-transferase From Schistosoma
           Haematobium (glutathione Saturated)
 pdb|2C80|A Chain A, Stucture Of Sh28gst In Complex With S-Hexyl Glutathione
 pdb|2C80|B Chain B, Stucture Of Sh28gst In Complex With S-Hexyl Glutathione
 pdb|2CA8|A Chain A, Structure Of Sh28gst In Complex With Gsh At Ph 6.0
          Length = 211

 Score = 29.6 bits (65), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 199 FEEGPYVFPNTSWGVLIPPNIEDDHSPLPGWMIESLKAVKYIDSDHF 245
           F++ P + P    G L    I D+H  +  WM+ESL   +Y+   H 
Sbjct: 38  FQDWPKIKPTIPGGRLPAVKITDNHGHVK-WMVESLAIARYMAKKHH 83


>pdb|2C8U|A Chain A, Structure Of R21q Mutant Of Sh28gst
 pdb|2C8U|B Chain B, Structure Of R21q Mutant Of Sh28gst
          Length = 211

 Score = 29.6 bits (65), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 199 FEEGPYVFPNTSWGVLIPPNIEDDHSPLPGWMIESLKAVKYIDSDHF 245
           F++ P + P    G L    I D+H  +  WM+ESL   +Y+   H 
Sbjct: 38  FQDWPKIKPTIPGGRLPAVKITDNHGHVK-WMVESLAIARYMAKKHH 83


>pdb|2CAI|A Chain A, Structure Of Glutathione-S-Transferase Mutant, R21l, From
           Schistosoma Haematobium
 pdb|2CAI|B Chain B, Structure Of Glutathione-S-Transferase Mutant, R21l, From
           Schistosoma Haematobium
 pdb|2CAQ|A Chain A, Structure Of R21l Mutant Of Sh28gst In Complex With Gsh
          Length = 211

 Score = 29.6 bits (65), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 199 FEEGPYVFPNTSWGVLIPPNIEDDHSPLPGWMIESLKAVKYIDSDHF 245
           F++ P + P    G L    I D+H  +  WM+ESL   +Y+   H 
Sbjct: 38  FQDWPKIKPTIPGGRLPAVKITDNHGHVK-WMVESLAIARYMAKKHH 83


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.320    0.137    0.420 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,409,952
Number of Sequences: 62578
Number of extensions: 489967
Number of successful extensions: 1007
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1007
Number of HSP's gapped (non-prelim): 5
length of query: 366
length of database: 14,973,337
effective HSP length: 100
effective length of query: 266
effective length of database: 8,715,537
effective search space: 2318332842
effective search space used: 2318332842
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)