Query 017769
Match_columns 366
No_of_seqs 240 out of 1456
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 04:39:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017769.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017769hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rfy_A Peptidyl-prolyl CIS-tra 100.0 9.2E-81 3.2E-85 617.4 21.8 279 84-362 16-294 (369)
2 2fu0_A Cyclophilin, putative; 99.9 4.3E-24 1.5E-28 189.9 11.1 94 239-365 6-100 (160)
3 2ok3_A Peptidyl-prolyl CIS-tra 99.9 5E-24 1.7E-28 189.4 11.1 93 240-365 2-95 (161)
4 2b71_A Cyclophilin-like protei 99.9 1.3E-24 4.6E-29 199.2 7.3 104 229-365 29-133 (196)
5 2x7k_A Peptidyl-prolyl CIS-tra 99.9 5.7E-24 1.9E-28 190.1 11.1 95 238-365 11-106 (166)
6 1zkc_A Peptidyl-prolyl CIS-tra 99.9 1.2E-23 3.9E-28 193.2 11.8 97 236-365 17-114 (197)
7 2hq6_A Serologically defined c 99.9 1.2E-23 4.2E-28 191.2 11.8 102 229-365 17-119 (185)
8 2a2n_A Peptidylprolyl isomeras 99.9 2.5E-23 8.6E-28 187.7 11.5 95 238-365 21-116 (176)
9 2poe_A Cyclophilin-like protei 99.9 1.9E-23 6.5E-28 189.9 10.6 93 238-363 16-109 (185)
10 3bo7_A Peptidyl-prolyl CIS-tra 99.9 2.9E-23 9.9E-28 190.7 11.1 98 235-365 3-113 (201)
11 3bkp_A Cyclophilin; malaria, i 99.9 4.6E-23 1.6E-27 193.4 12.2 102 228-364 13-117 (232)
12 2k7n_A Peptidyl-prolyl CIS-tra 99.9 5.3E-23 1.8E-27 189.7 10.5 95 238-365 11-106 (203)
13 2z6w_A Peptidyl-prolyl CIS-tra 99.9 2.6E-22 8.9E-27 179.1 11.3 98 239-365 4-106 (165)
14 3ich_A Peptidyl-prolyl CIS-tra 99.9 2.3E-22 8E-27 183.1 10.6 104 231-365 10-118 (188)
15 1v9t_A Cyclophilin B; beta bar 99.9 4.1E-22 1.4E-26 177.8 11.0 91 236-362 2-93 (166)
16 2c3b_A Ppiase, cyclophilin; is 99.9 8.3E-23 2.8E-27 183.6 6.3 100 240-365 4-110 (172)
17 1a58_A Cyclophilin; isomerase, 99.9 5.4E-22 1.8E-26 178.9 11.6 99 238-365 6-117 (177)
18 2r99_A Peptidyl-prolyl CIS-tra 99.9 6E-22 2E-26 178.1 11.8 99 238-365 11-114 (173)
19 1qng_A Peptidyl-prolyl CIS-tra 99.9 5.1E-22 1.7E-26 178.0 11.0 99 238-365 3-112 (170)
20 2igv_A Peptidyl-prolyl CIS-tra 99.9 5.5E-22 1.9E-26 178.3 11.1 99 238-365 3-113 (173)
21 2cmt_A Peptidyl-prolyl CIS-tra 99.9 6.9E-22 2.3E-26 177.7 11.6 99 238-365 10-113 (172)
22 1mzw_A Cyclophilin H, U-snRNP- 99.9 6.3E-22 2.2E-26 178.5 11.2 99 238-365 10-118 (177)
23 1w74_A Peptidyl-prolyl CIS-tra 99.9 7.4E-22 2.5E-26 180.4 11.5 93 237-365 22-130 (191)
24 2wfi_A Peptidyl-prolyl CIS-tra 99.9 8E-22 2.7E-26 178.2 11.6 99 238-365 9-120 (179)
25 3pmp_A Cyclophilin A; peptidyl 99.9 6.7E-22 2.3E-26 176.1 10.9 97 240-365 4-105 (164)
26 2haq_A Cyclophilin; rotamase, 99.9 9.8E-22 3.3E-26 176.8 11.0 97 239-365 12-113 (172)
27 2poy_A Peptidyl-prolyl CIS-tra 99.9 1.1E-21 3.6E-26 178.6 11.0 101 236-365 17-129 (186)
28 4fru_A Cyclophilin B, peptidyl 99.9 7.5E-22 2.6E-26 179.0 9.6 103 232-365 8-115 (185)
29 1z81_A Cyclophilin; structural 99.9 1.5E-21 5.3E-26 182.8 11.9 100 237-365 58-167 (229)
30 2he9_A NK-tumor recognition pr 99.9 1.7E-21 5.9E-26 178.0 11.5 99 238-365 19-130 (192)
31 1ihg_A Cyclophilin 40; ppiase 99.9 1.9E-21 6.5E-26 189.0 12.0 99 238-365 15-126 (370)
32 3k2c_A Peptidyl-prolyl CIS-tra 99.8 3.6E-21 1.2E-25 175.9 11.0 100 237-365 26-130 (193)
33 3rdd_A Peptidyl-prolyl CIS-tra 99.8 4.3E-21 1.5E-25 174.2 11.0 101 236-365 20-125 (184)
34 1lop_A Cyclophilin A; rotamase 99.8 2E-21 6.7E-26 173.1 8.4 86 241-362 2-88 (164)
35 3s6m_A Peptidyl-prolyl CIS-tra 99.8 3.7E-21 1.3E-25 171.5 8.5 58 239-304 4-62 (167)
36 2ose_A Probable peptidyl-proly 99.8 1E-20 3.4E-25 177.7 10.3 100 231-361 7-133 (234)
37 1vyk_A Oxygen-evolving enhance 95.2 0.056 1.9E-06 47.5 7.7 125 85-212 8-143 (149)
38 3zsu_A TLL2057 protein, cyanoq 93.9 0.19 6.4E-06 43.3 7.9 93 116-211 28-120 (130)
39 3ls0_A SLL1638 protein, PSBQ; 91.9 0.22 7.5E-06 43.1 5.5 93 116-211 30-123 (133)
40 2khf_A PLNJ; anti-microbial, b 41.3 7.9 0.00027 24.0 0.7 16 271-286 3-18 (26)
41 2nnz_A Hypothetical protein; b 36.4 26 0.0009 30.4 3.5 24 255-278 38-61 (153)
42 3kop_A Uncharacterized protein 31.4 55 0.0019 29.6 4.8 32 240-278 23-55 (188)
43 4dnd_A Syntaxin-10, SYN10; str 31.0 1E+02 0.0034 26.0 6.2 68 116-199 31-100 (130)
44 2c5k_T Syntaxin TLG1, T-snare 25.2 2.6E+02 0.0087 22.2 7.4 25 168-192 36-60 (95)
45 4dnd_A Syntaxin-10, SYN10; str 21.8 1.4E+02 0.0047 25.1 5.4 19 174-192 66-84 (130)
46 3ghg_C Fibrinogen gamma chain; 21.5 2.3E+02 0.0078 28.4 7.7 99 104-217 27-135 (411)
No 1
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=9.2e-81 Score=617.44 Aligned_cols=279 Identities=85% Similarity=1.332 Sum_probs=272.9
Q ss_pred hcCCCCCcccccCCCCCCCHHHHhhhcCCCCCHhHHHHhhhHhhhhhhhhcccCcCChhhhhhHHHHHHHHhcccchhhc
Q 017769 84 INMAMPDVSVLISGPPIKDPGALLRYALPIDNKAVREVQKPLEDITDSLKIAGVKALDPVERNVRQASRTLKQGKSLIVE 163 (366)
Q Consensus 84 ~~~~~~~~a~l~~g~~i~d~~a~LR~alPi~n~~ir~iQ~~LE~i~~~Lr~~~~K~w~~~~~~v~~a~~~l~~~~~~il~ 163 (366)
.+++.|..|+||+|||||||+|||||||||+|++||+||++||+|+++||+||||||++|++||++|+++|++++++||+
T Consensus 16 ~~~~~~~~~~l~~g~~~~~~~a~lr~alp~~~~~~~~~q~~le~~~~~lr~~~~k~~~~~~~~~~~~~~~~~~~~~~il~ 95 (369)
T 3rfy_A 16 ANPVIPDVSVLISGPPIKDPEALLRYALPIDNKAIREVQKPLEDITDSLKIAGVKALDSVERNVRQASRTLQQGKSIIVA 95 (369)
T ss_dssp ECTTSCSCCEEEESTTSCCHHHHHHHHSCCCCHHHHHHHHHHHTHHHHTTSCSTTTHHHHHHHHHHHHHHHSCHHHHHTT
T ss_pred ecccCchhhccCCCCCCCCHHHHHhhhcCCCChhHHHHHHHHHHHHHHhccccCCCchHHHHHHHHHHHHHhhCHHHHHh
Confidence 46888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHhHHHHHHHHhhcCccchhhHHHHHHHHhhchhhhcccCCCCCCCcccccCCCCCCceEEEE
Q 017769 164 GLAESKKEHGMELLQKLEAGMDELQQIVEDRDRDAVAPKQKELLNYVGGVEEDMVDGFPYEVPEEYQSMPLLKGRATVDM 243 (366)
Q Consensus 164 ~vp~~~~~~~~~l~~~l~~~l~~l~~~~~~kd~d~~~~~~~~~L~~v~~lE~~~v~~~p~~vP~~y~~~P~L~GratV~~ 243 (366)
+||+++|++|+++|++|+++|++|++++++||+++|...|+++|+.|++||++|+++|||+||++|.++|+++||++|+|
T Consensus 96 ~v~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~~~~~~~~~~~l~~v~~le~~~~~~fp~~vP~~y~~~P~l~gra~V~m 175 (369)
T 3rfy_A 96 GFAESKKDHGNEMIEKLEAGMQDMLKIVEDRKRDAVAPKQKEILKYVGGIEEDMVDGFPYEVPEEYRNMPLLKGRASVDM 175 (369)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHHHCCCSSCCCSSSGGGHHHHHHHHHHHHHHSSCSSCSSCCSSCTTSCEECSEEEEEE
T ss_pred hcChhhHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhhccCCCccCchhcccCccCCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeeeCCceEecCCCCCCCCCccCCCCCccccccchh
Q 017769 244 KVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRADGFVVQTGDPEGPAEGFIDPSTEKTRTIPLEI 323 (366)
Q Consensus 244 ~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV~gFVIQgGDp~g~g~G~~dp~tg~~~~iPlEI 323 (366)
+|++++++++..|+|+|+||++.||+||+||++||+.|||||+.||||+|||||||||.++|.||.+|.++..+.+|+||
T Consensus 176 ~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV~gFmIQgGDp~g~G~G~~~~~~g~~~~iP~E~ 255 (369)
T 3rfy_A 176 KVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRSDGFVVQTGDPEGPAEGFIDPSTEKTRTVPLEI 255 (369)
T ss_dssp EEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEEEEEEECCCCCCCCCSCCCSCCCCCCCSSSSSS
T ss_pred EEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeeeCCeeEecCCCCCCCCCccCcccCcCcccCccc
Confidence 99988877788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecC
Q 017769 324 MVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARD 362 (366)
Q Consensus 324 ~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs 362 (366)
...|.+.|+|+.+|+++||+...+.|+||++|+|||||+
T Consensus 256 ~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns 294 (369)
T 3rfy_A 256 MVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMARE 294 (369)
T ss_dssp CSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSC
T ss_pred cccCCCCCcCCCccccccccccccccccCCCceEEEeec
Confidence 999999999999999999877788999999999999997
No 2
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=99.90 E-value=4.3e-24 Score=189.91 Aligned_cols=94 Identities=22% Similarity=0.218 Sum_probs=82.7
Q ss_pred eEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCccc
Q 017769 239 ATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKTR 317 (366)
Q Consensus 239 atV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G~~dp~tg~~~ 317 (366)
..|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||||||||.++|.|
T Consensus 6 ~~v~~~T~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~g---------- 67 (160)
T 2fu0_A 6 KSAIIYTT--------MGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTG---------- 67 (160)
T ss_dssp CEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSC----------
T ss_pred CEEEEEec--------CccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCC----------
Confidence 47888998 7999999999999999999999999999999999999 9999999999877665
Q ss_pred cccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 318 TIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 318 ~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++||.+|+++. .+.++|+.+|+|||||+.++
T Consensus 68 -----------g~si~g~~~~dE~----~~~l~h~~~G~lsmA~~gp~ 100 (160)
T 2fu0_A 68 -----------GESIWGNEFEDEF----FDHLNHSKPFMVSMANCGPN 100 (160)
T ss_dssp -----------CCCTTSSCBCCCC----BTTBCSSSSSEEEECCSSTT
T ss_pred -----------CCcccCCCccccc----cCCcccCCceEEEEecCCCC
Confidence 2568888888752 34689999999999998653
No 3
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=99.90 E-value=5e-24 Score=189.43 Aligned_cols=93 Identities=29% Similarity=0.487 Sum_probs=82.0
Q ss_pred EEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCcccc
Q 017769 240 TVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKTRT 318 (366)
Q Consensus 240 tV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G~~dp~tg~~~~ 318 (366)
.|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||+|||||.++|.|
T Consensus 2 ~v~~~T~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~g----------- 62 (161)
T 2ok3_A 2 SVTLHTD--------VGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG----------- 62 (161)
T ss_dssp EEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSC-----------
T ss_pred EEEEEeC--------CccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCC-----------
Confidence 4778887 7999999999999999999999999999999999999 9999999999877655
Q ss_pred ccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 319 IPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 319 iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++||.+++++. .+.|+|+++|+|||||+.++
T Consensus 63 ----------g~si~g~~~~dE~----~~~l~h~~~G~lsma~~gp~ 95 (161)
T 2ok3_A 63 ----------GNSIWGKKFEDEY----SEYLKHNVRGVVSMANNGPN 95 (161)
T ss_dssp ----------CCCTTSSCBCCCC----CTTCCSCSTTEEEECCSSTT
T ss_pred ----------CCcccCCcccccc----CcCcCcCCCeEEEEecCCCC
Confidence 3578888888752 35789999999999998653
No 4
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=99.90 E-value=1.3e-24 Score=199.23 Aligned_cols=104 Identities=28% Similarity=0.452 Sum_probs=88.7
Q ss_pred cccCCCCCCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCC
Q 017769 229 YQSMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEG 307 (366)
Q Consensus 229 y~~~P~L~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G 307 (366)
|-..|...++..|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||||||||.++|.|
T Consensus 29 ~~~~~~~~~~~~V~l~T~--------~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~g 100 (196)
T 2b71_A 29 YYKMKGHTERGYITIYTN--------LGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKG 100 (196)
T ss_dssp HHHHHHHHHSCEEEEEET--------TEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSC
T ss_pred eeecCCcCCCcEEEEEeC--------CCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCC
Confidence 344444445678999998 7999999999999999999999999999999999999 9999999999887665
Q ss_pred ccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 308 FIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 308 ~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++||.+|+++ ..+.++|+++|+|||||+.++
T Consensus 101 ---------------------g~si~g~~~~dE----~~~~l~h~~~G~lsMAn~gpn 133 (196)
T 2b71_A 101 ---------------------GKSIYGEYFEDE----INKELKHTGAGILSMSNNGPN 133 (196)
T ss_dssp ---------------------CCBTTBSCBCCC----CCTTCCCCSTTEEEECCSSTT
T ss_pred ---------------------CCccCCCccccc----ccCCcCcCCCeEEEEccCCCC
Confidence 356788888875 246789999999999998653
No 5
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=99.90 E-value=5.7e-24 Score=190.14 Aligned_cols=95 Identities=29% Similarity=0.513 Sum_probs=84.0
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCcc
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKT 316 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G~~dp~tg~~ 316 (366)
...|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||||||||.++|.|
T Consensus 11 ~~~v~l~t~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~g--------- 73 (166)
T 2x7k_A 11 PPNVYLETS--------MGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRG--------- 73 (166)
T ss_dssp CSEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSC---------
T ss_pred CCEEEEEeC--------CCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCC---------
Confidence 468999998 7999999999999999999999999999999999999 9999999999877665
Q ss_pred ccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 317 RTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 317 ~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++|+.+|+++. .+.++|+++|+|||||+.++
T Consensus 74 ------------g~si~g~~~~dE~----~~~l~h~~~G~lsmAn~gp~ 106 (166)
T 2x7k_A 74 ------------GASIYGKQFEDEL----HPDLKFTGAGILAMANAGPD 106 (166)
T ss_dssp ------------CCCTTSSCBCCCC----CTTSCCCSTTEEEECBSSTT
T ss_pred ------------CCccCCCcccccc----ccccCCCCCeEEEEeeCCCC
Confidence 3567888888752 36789999999999998654
No 6
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.90 E-value=1.2e-23 Score=193.24 Aligned_cols=97 Identities=27% Similarity=0.535 Sum_probs=85.6
Q ss_pred CCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCC
Q 017769 236 KGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTE 314 (366)
Q Consensus 236 ~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G~~dp~tg 314 (366)
+...+|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||||||||.++|.|
T Consensus 17 ~~~~~v~l~T~--------~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~G------- 81 (197)
T 1zkc_A 17 RGSGYVRLHTN--------KGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTG------- 81 (197)
T ss_dssp CSCEEEEEEET--------TEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSC-------
T ss_pred CCCcEEEEEeC--------CccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCC-------
Confidence 45678999998 7999999999999999999999999999999999999 9999999999887665
Q ss_pred ccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 315 KTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 315 ~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++||.+|+++ ..+.++|+.+|+|||||+.++
T Consensus 82 --------------g~si~g~~f~dE----~~~~l~h~~~G~lsMAn~gp~ 114 (197)
T 1zkc_A 82 --------------GESYWGKPFKDE----FRPNLSHTGRGILSMANSGPN 114 (197)
T ss_dssp --------------CCBTTBSCBCCC----CCTTCCSCSTTEEEECCSSTT
T ss_pred --------------CCccCCCccccc----cCcCcCCCCceEEEEecCCCC
Confidence 256788888875 246789999999999998654
No 7
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=99.90 E-value=1.2e-23 Score=191.16 Aligned_cols=102 Identities=32% Similarity=0.475 Sum_probs=85.9
Q ss_pred cccCCCCCCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCC
Q 017769 229 YQSMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEG 307 (366)
Q Consensus 229 y~~~P~L~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G 307 (366)
|...|.. ...|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||||||||.++|.|
T Consensus 17 ~~~~~~~--~~~V~l~T~--------~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~g 86 (185)
T 2hq6_A 17 RGSEPPT--NGKVLLKTT--------AGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSG 86 (185)
T ss_dssp TTCCCCC--BCEEEEEET--------TEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSC
T ss_pred cccCCCC--CCEEEEEeC--------CccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCC
Confidence 3334443 346788898 7999999999999999999999999999999999999 9999999999877665
Q ss_pred ccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 308 FIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 308 ~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++||.+|+++. .+.++|+.+|+|||||+.++
T Consensus 87 ---------------------g~si~g~~~~dE~----~~~l~h~~~G~lsMA~~g~~ 119 (185)
T 2hq6_A 87 ---------------------GESIYGAPFKDEF----HSRLRFNRRGLVAMANAGSH 119 (185)
T ss_dssp ---------------------CCCTTSSCBCCCC----BTTBCSCSSSEEEECCSSTT
T ss_pred ---------------------CCcccCCcccccc----ccCcccCCCeEEEEccCCCC
Confidence 2567888888752 35688999999999998653
No 8
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.89 E-value=2.5e-23 Score=187.73 Aligned_cols=95 Identities=24% Similarity=0.364 Sum_probs=83.4
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCcc
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKT 316 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G~~dp~tg~~ 316 (366)
...|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||||||||.++|.|
T Consensus 21 ~~~v~~~t~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~g--------- 83 (176)
T 2a2n_A 21 SDSAIIHTS--------MGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMG--------- 83 (176)
T ss_dssp CSEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSC---------
T ss_pred CCEEEEEec--------CccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCC---------
Confidence 457889998 7999999999999999999999999999999999999 9999999999877665
Q ss_pred ccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 317 RTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 317 ~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++||.+|+|+. .+.++|+++|+|||||+.++
T Consensus 84 ------------g~si~g~~~~dE~----~~~l~h~~~G~lsmA~~gp~ 116 (176)
T 2a2n_A 84 ------------GESIWGGEFEDEF----HSTLRHDRPYTLSMANAGSN 116 (176)
T ss_dssp ------------CCCTTSSCBCCCC----CTTCCSCSSSEEEECCSSTT
T ss_pred ------------CCcccCCcccccc----ccccccCCceEEEEEeCCCC
Confidence 2568888888752 34689999999999998653
No 9
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=99.89 E-value=1.9e-23 Score=189.88 Aligned_cols=93 Identities=23% Similarity=0.420 Sum_probs=82.7
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCcc
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKT 316 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G~~dp~tg~~ 316 (366)
...|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||||||||.++|.|
T Consensus 16 ~~~v~i~t~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~g--------- 78 (185)
T 2poe_A 16 FQGVRIITN--------YGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKG--------- 78 (185)
T ss_dssp CCEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSC---------
T ss_pred ceEEEEEec--------CccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCC---------
Confidence 457888887 7999999999999999999999999999999999999 9999999999877665
Q ss_pred ccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCC
Q 017769 317 RTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDC 363 (366)
Q Consensus 317 ~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~ 363 (366)
+.++||.+|+++. .+.|+|+++|+|||||+.
T Consensus 79 ------------g~si~g~~~~dE~----~~~l~h~~~G~lsmA~~g 109 (185)
T 2poe_A 79 ------------GESIYGRYFDDEI----YPELKYDRRGILSMASKG 109 (185)
T ss_dssp ------------CCBTTBSCBCCCC----CTTSCCCSTTEEEECCSC
T ss_pred ------------CCccCCCcccccc----cCCCccCCCeEEEEecCC
Confidence 2467888888752 377899999999999987
No 10
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=99.89 E-value=2.9e-23 Score=190.65 Aligned_cols=98 Identities=23% Similarity=0.372 Sum_probs=78.3
Q ss_pred CCCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecC-----CCCCCCCCc
Q 017769 235 LKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTG-----DPEGPAEGF 308 (366)
Q Consensus 235 L~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgG-----Dp~g~g~G~ 308 (366)
++.+.+|.|+|+ .|+|+|+||++.||+||+||+.||+.|||||+.|||| ++|||||| ||.++|.|.
T Consensus 3 ~~~~~~v~l~T~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg 74 (201)
T 3bo7_A 3 LKKKGYLRIVTT--------QGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQ 74 (201)
T ss_dssp --CCEEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------
T ss_pred CCCceEEEEEeC--------CCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCC
Confidence 346789999998 7999999999999999999999999999999999999 99999999 998877662
Q ss_pred cCCCCCccccccchhcccCCCCCCC-------CcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 309 IDPSTEKTRTIPLEIMVEGEKSPFY-------GATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 309 ~dp~tg~~~~iPlEI~~~g~~~PiY-------g~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
.++| +.+|+++ ..+.++|+++|+|||||+.++
T Consensus 75 ---------------------~si~~~~~~~~g~~f~dE----~~~~l~h~~~G~lsmA~~gp~ 113 (201)
T 3bo7_A 75 ---------------------QSPRSISGFPGGAPFEDE----FDNRLVHQGIGVLSMANDGKH 113 (201)
T ss_dssp ---------------------CCSSCCCSSTTCCCBCCC----CCTTCCCCSTTEEEECCSSTT
T ss_pred ---------------------ccccccccccCCCcccCc----ccCCCCcCCCcEEEEeeCCCC
Confidence 3455 5666654 246788999999999998653
No 11
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.89 E-value=4.6e-23 Score=193.40 Aligned_cols=102 Identities=22% Similarity=0.308 Sum_probs=85.9
Q ss_pred ccccCCCCCCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCC
Q 017769 228 EYQSMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAE 306 (366)
Q Consensus 228 ~y~~~P~L~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~ 306 (366)
.|...|..+ ..|.|+|+ .|+|+|+||++.||+||+||+.||+.|||||+.|||| ++||||||||.++|.
T Consensus 13 ~~~~~p~~~--~~V~l~T~--------~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~ 82 (232)
T 3bkp_A 13 NLYFQGSTR--GKVVLHTS--------LGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGR 82 (232)
T ss_dssp GGGCCCSCB--CEEEEEET--------TEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSS
T ss_pred cccccCCCC--CEEEEEEC--------CCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCC
Confidence 355566544 46788898 7999999999999999999999999999999999999 999999999998776
Q ss_pred CccCCCCCccccccchhcccCCCCCCC--CcchhhhhcccccCCCCCCCceEEEeecCCC
Q 017769 307 GFIDPSTEKTRTIPLEIMVEGEKSPFY--GATLEELGLYKAQTKLPFNAFGTMAMARDCL 364 (366)
Q Consensus 307 G~~dp~tg~~~~iPlEI~~~g~~~PiY--g~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~ 364 (366)
| +.++| |.+|+++. .+.++|+.+|+|||||+.+
T Consensus 83 G---------------------g~si~~~g~~f~dE~----~~~l~h~~~G~lsMA~~g~ 117 (232)
T 3bkp_A 83 G---------------------GADTTFDGKPFDVET----HPRLKFRYRGLVGVANLGR 117 (232)
T ss_dssp C---------------------CCCCTTTTCCBCCCC----CTTCCCCSTTEEEECCCC-
T ss_pred C---------------------CCccccCCCccCCcc----ccCcCcCCCeEEEEeccCC
Confidence 6 24567 77777652 3578899999999999865
No 12
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=99.88 E-value=5.3e-23 Score=189.66 Aligned_cols=95 Identities=29% Similarity=0.513 Sum_probs=83.8
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCcc
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKT 316 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G~~dp~tg~~ 316 (366)
...|.|+|+ .|+|+|+||++.||+||+||++||++|||||+.|||| ++||||||||.+++.|
T Consensus 11 ~~~V~l~T~--------~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~g--------- 73 (203)
T 2k7n_A 11 PPNVYLETS--------MGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRG--------- 73 (203)
T ss_dssp CSEEEEEES--------SCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSC---------
T ss_pred CCEEEEEeC--------CCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCC---------
Confidence 468999998 7999999999999999999999999999999999999 9999999999877655
Q ss_pred ccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 317 RTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 317 ~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++|+.+|++|. .+.|+|+++|+|||||+.++
T Consensus 74 ------------g~si~g~~f~dE~----~~~l~h~~~G~lsMAn~gpn 106 (203)
T 2k7n_A 74 ------------GASIYGKQFEDEL----HPDLKFTGAGILAMANAGPD 106 (203)
T ss_dssp ------------CCTTSCSCBCCCC----CCSSCCCSSCEEEEEESSTT
T ss_pred ------------CCccCCCcccccc----cccccCCCCeEEEEeeCCCC
Confidence 3567888888752 36789999999999998653
No 13
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=99.87 E-value=2.6e-22 Score=179.13 Aligned_cols=98 Identities=24% Similarity=0.331 Sum_probs=81.6
Q ss_pred eEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh--ccC-CCCceeeee-CCceEecCCCC-CCCCCccCCCC
Q 017769 239 ATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGDPE-GPAEGFIDPST 313 (366)
Q Consensus 239 atV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFVIQgGDp~-g~g~G~~dp~t 313 (366)
..|.|++.+.+ ...|+|+|+||++.||+||+||++||+ +|| |||+.|||| ++|||||||+. ++|.|
T Consensus 4 ~~v~~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g------ 74 (165)
T 2z6w_A 4 PLVYLDVDANG---KPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTG------ 74 (165)
T ss_dssp CEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSC------
T ss_pred CEEEEEEEECC---EeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCC------
Confidence 45666665432 247999999999999999999999999 999 999999999 99999999985 55554
Q ss_pred CccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 314 EKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 314 g~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++|+.+|+|+ .+.++|+.+|+|||||+.++
T Consensus 75 ---------------g~si~g~~f~dE-----~~~l~h~~~G~lsmA~~gp~ 106 (165)
T 2z6w_A 75 ---------------GKSIYGSRFPDE-----NFTLKHVGPGVLSMANAGPN 106 (165)
T ss_dssp ---------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred ---------------CCcccCCcccCc-----ccccccCCCCEEEEeeCCCC
Confidence 256788888774 46789989999999998653
No 14
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.87 E-value=2.3e-22 Score=183.12 Aligned_cols=104 Identities=26% Similarity=0.382 Sum_probs=84.8
Q ss_pred cCCCCCCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh--ccC-CCCceeeee-CCceEecCC-CCCCC
Q 017769 231 SMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGD-PEGPA 305 (366)
Q Consensus 231 ~~P~L~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFVIQgGD-p~g~g 305 (366)
..|.++.++.+++.+.. ...|+|+|+||++.||+||+||+.||+ +|| |||+.|||| ++||||||| +.++|
T Consensus 10 ~~p~~~~~v~~di~i~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g 84 (188)
T 3ich_A 10 KGPKVTVKVYFDLRIGD-----EDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDG 84 (188)
T ss_dssp CSCEEEEEEEEEEEETT-----EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCcCCeEEEEEEECC-----EeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCC
Confidence 45666665666655431 247999999999999999999999994 899 999999999 999999999 56776
Q ss_pred CCccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 306 EGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 306 ~G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
.| +.++||.+|+++ .+.++|+++|+|||||+.++
T Consensus 85 ~g---------------------g~si~g~~f~dE-----~~~l~h~~~G~lsmAn~gp~ 118 (188)
T 3ich_A 85 TG---------------------GKSIYGERFPDE-----NFKLKHYGPGWVSMANAGKD 118 (188)
T ss_dssp SC---------------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred CC---------------------CccccCCccccc-----ccCcccCCCeEEEEccCCCC
Confidence 65 256888888874 56789999999999998653
No 15
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=99.87 E-value=4.1e-22 Score=177.77 Aligned_cols=91 Identities=30% Similarity=0.407 Sum_probs=74.4
Q ss_pred CCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCC
Q 017769 236 KGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTE 314 (366)
Q Consensus 236 ~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G~~dp~tg 314 (366)
+|+..|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++|||||||+.+.+.+
T Consensus 2 ~~~~~v~~~t~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~------- 66 (166)
T 1v9t_A 2 KGDPHVLLTTS--------AGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQ------- 66 (166)
T ss_dssp CCSCEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCCB-------
T ss_pred CCCeEEEEEeC--------CccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCCC-------
Confidence 47789999998 7999999999999999999999999999999999999 9999999999865322
Q ss_pred ccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecC
Q 017769 315 KTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARD 362 (366)
Q Consensus 315 ~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs 362 (366)
..|+.+|+++. ....+|.+|+|||||+
T Consensus 67 ----------------~~~g~~~~dE~-----~~~l~~~~G~lsmA~~ 93 (166)
T 1v9t_A 67 ----------------KKPNPPIKNEA-----DNGLRNTRGTIAMART 93 (166)
T ss_dssp ----------------CCCCCCBCCCG-----GGSCCCCTTEEEECCC
T ss_pred ----------------CCCCCcccccc-----cccccCCceEEEEeec
Confidence 01233444432 1224678999999996
No 16
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=99.87 E-value=8.3e-23 Score=183.55 Aligned_cols=100 Identities=22% Similarity=0.296 Sum_probs=64.7
Q ss_pred EEEEEeccc--CCCCccceeEEEEEeCCCChhhHHHHHHhHh--ccC-CCCceeeee-CCceEecCC-CCCCCCCccCCC
Q 017769 240 TVDMKVKVK--DNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGD-PEGPAEGFIDPS 312 (366)
Q Consensus 240 tV~~~t~~~--d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFVIQgGD-p~g~g~G~~dp~ 312 (366)
.|.|++++. +......|+|+|+||++.||+||+||++||+ +|| |||+.|||| ++||||||| +.++|.|
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g----- 78 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTG----- 78 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC-------------
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCC-----
Confidence 345555544 3444567999999999999999999999999 889 999999999 999999999 7777665
Q ss_pred CCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 313 TEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 313 tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++||.+|+|+ .+.++|+++|+|||||+.++
T Consensus 79 ----------------g~si~g~~f~dE-----~~~~~h~~~G~lsmA~~gp~ 110 (172)
T 2c3b_A 79 ----------------GRSIYGDKFADE-----NFSRKHDKKGILSMANAGPN 110 (172)
T ss_dssp -----------------------------------CHHHHHTCEEEEC-----
T ss_pred ----------------CcccCCCcccCc-----ccccccCCCeEEEEeeCCCC
Confidence 256888888875 46788999999999998643
No 17
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=99.87 E-value=5.4e-22 Score=178.89 Aligned_cols=99 Identities=23% Similarity=0.312 Sum_probs=82.8
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhc--------c---CCCCceeeee-CCceEecCCCC-CC
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQR--------H---FYDGMEIQRA-DGFVVQTGDPE-GP 304 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~--------G---fYDG~~FhRV-~gFVIQgGDp~-g~ 304 (366)
+..|.|++.+.+ ...|+|+|+||++.||+||+||+.||+. | ||||+.|||| ++|||||||+. ++
T Consensus 6 ~~~v~~di~i~~---~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~ 82 (177)
T 1a58_A 6 RRRVFLDVTIDG---NLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGD 82 (177)
T ss_dssp CEEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSS
T ss_pred CcEEEEEEEECC---EeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCC
Confidence 567777776533 3589999999999999999999999974 4 9999999999 99999999986 66
Q ss_pred CCCccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 305 AEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 305 g~G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
|.| +.++|+.+|+|+ ...++|+.+|+|||||+.++
T Consensus 83 g~g---------------------g~si~g~~f~dE-----~~~~~h~~~G~lsmAn~gp~ 117 (177)
T 1a58_A 83 GTG---------------------GESIYGGMFDDE-----EFVMKHDEPFVVSMANKGPN 117 (177)
T ss_dssp SSC---------------------CCCTTSSCBCCC-----CCCSCCCSSSEEEECCSSTT
T ss_pred CCC---------------------CCcccCCcccCc-----ccCcccCCCeEEEEeeCCCC
Confidence 655 357899888875 45789999999999998654
No 18
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=99.87 E-value=6e-22 Score=178.11 Aligned_cols=99 Identities=24% Similarity=0.381 Sum_probs=81.6
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhH--hccC-CCCceeeee-CCceEecCCCC-CCCCCccCCC
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLV--QRHF-YDGMEIQRA-DGFVVQTGDPE-GPAEGFIDPS 312 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv--~~Gf-YDG~~FhRV-~gFVIQgGDp~-g~g~G~~dp~ 312 (366)
+..|.|++.+.+ ...|+|+|+||++.||+||+||++|| ++|| |||+.|||| ++|||||||+. ++|.|
T Consensus 11 ~~~v~~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g----- 82 (173)
T 2r99_A 11 NPQVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTG----- 82 (173)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSC-----
T ss_pred CCEEEEEEEECC---ccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCC-----
Confidence 456666654321 24899999999999999999999999 4898 999999999 99999999986 55554
Q ss_pred CCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 313 TEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 313 tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++|+..|+|+ .+.++|+.+|+|||||+.++
T Consensus 83 ----------------g~si~g~~f~dE-----~~~l~h~~~G~lsmA~~gp~ 114 (173)
T 2r99_A 83 ----------------GKSIYGKKFDDE-----NFILKHTGPGLLSMANSGPN 114 (173)
T ss_dssp ----------------CCBTTBSCBCCC-----CCCSCCCSSSEEEECCSSTT
T ss_pred ----------------CCccCCCcccCc-----ccCcccCCCcEEEEccCCCC
Confidence 357888888874 46789999999999998654
No 19
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=99.86 E-value=5.1e-22 Score=178.01 Aligned_cols=99 Identities=21% Similarity=0.323 Sum_probs=83.0
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh-ccC--------CCCceeeee-CCceEecCCCC-CCCC
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ-RHF--------YDGMEIQRA-DGFVVQTGDPE-GPAE 306 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~-~Gf--------YDG~~FhRV-~gFVIQgGDp~-g~g~ 306 (366)
+..|.|++++.+ ...|+|+|+||++.||+||+||++||+ .|| |||+.|||| ++|||||||+. ++|.
T Consensus 3 ~~~v~~di~i~~---~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 79 (170)
T 1qng_A 3 RSKVFFDISIDN---SNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGS 79 (170)
T ss_dssp SCEEEEEEEESS---SEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCEEEEEEeECC---EeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCC
Confidence 446777776543 348999999999999999999999998 599 999999999 99999999985 6665
Q ss_pred CccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 307 GFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 307 G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
| +.++|+.+|+|+ .+.++|+.+|+|||||+.++
T Consensus 80 g---------------------g~si~g~~f~dE-----~~~l~h~~~G~lsmAn~gp~ 112 (170)
T 1qng_A 80 G---------------------GESIYGRSFTDE-----NFNMKHDQPGLLSMANAGPN 112 (170)
T ss_dssp C---------------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred C---------------------CccccCCccccc-----ccccccCCCCEEEEeecCCC
Confidence 5 257888888874 46789999999999998654
No 20
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=99.86 E-value=5.5e-22 Score=178.26 Aligned_cols=99 Identities=24% Similarity=0.350 Sum_probs=82.3
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhc--c--------CCCCceeeee-CCceEecCCCC-CCC
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQR--H--------FYDGMEIQRA-DGFVVQTGDPE-GPA 305 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~--G--------fYDG~~FhRV-~gFVIQgGDp~-g~g 305 (366)
+..|.|++++.+ ...|+|+|+||++.||+||+||+.||+. | ||||+.|||| ++|||||||+. ++|
T Consensus 3 ~~~v~~di~i~~---~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (173)
T 2igv_A 3 RSKVFFDITIGG---KASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNG 79 (173)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCEEEEEEEECC---EecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCC
Confidence 346777776532 3479999999999999999999999975 6 7999999999 99999999986 565
Q ss_pred CCccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 306 EGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 306 ~G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
.| +.++|+.+|+|+ .+.++|+.+|+|||||+.++
T Consensus 80 ~g---------------------g~siyg~~f~dE-----~~~l~h~~~G~lsmAn~gp~ 113 (173)
T 2igv_A 80 TG---------------------GESIYGEKFPDE-----NFKEKHTGPGVLSMANAGPN 113 (173)
T ss_dssp SC---------------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred CC---------------------CCccCCCcccCc-----ccccCCCCCeEEEEeeCCCC
Confidence 55 356888888874 46789999999999998654
No 21
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=99.86 E-value=6.9e-22 Score=177.67 Aligned_cols=99 Identities=26% Similarity=0.397 Sum_probs=81.3
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh--ccC-CCCceeeee-CCceEecCCCC-CCCCCccCCC
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGDPE-GPAEGFIDPS 312 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFVIQgGDp~-g~g~G~~dp~ 312 (366)
+..|.|++.+.+ ...|+|+|+||++.||+||+||++||+ +|| |||+.|||| ++|||||||+. ++|.|
T Consensus 10 ~~~v~~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g----- 81 (172)
T 2cmt_A 10 LPRVFFDIRIGN---GDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTG----- 81 (172)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSC-----
T ss_pred CCEEEEEEEECC---eecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCC-----
Confidence 345666654322 248999999999999999999999997 599 999999999 99999999986 55555
Q ss_pred CCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 313 TEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 313 tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++|+.+|+|+ .+.++|+++|+|||||+.++
T Consensus 82 ----------------g~si~g~~f~dE-----~~~l~h~~~G~lsmA~~gp~ 113 (172)
T 2cmt_A 82 ----------------GKSIYGRKFDDE-----NFQLRHEGFGVLSMANSGPN 113 (172)
T ss_dssp ----------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred ----------------CCccCCCccccc-----ccCcccCCceEEEEeeCCCC
Confidence 356788888874 45789999999999998654
No 22
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=99.86 E-value=6.3e-22 Score=178.54 Aligned_cols=99 Identities=26% Similarity=0.374 Sum_probs=83.0
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccC--------CCCceeeee-CCceEecCCCC-CCCCC
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHF--------YDGMEIQRA-DGFVVQTGDPE-GPAEG 307 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~Gf--------YDG~~FhRV-~gFVIQgGDp~-g~g~G 307 (366)
+..|.|+++..+ ...|+|+|+||++.||+||+||++||+.+| |||+.|||| ++|||||||+. ++|.|
T Consensus 10 ~~~v~~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 86 (177)
T 1mzw_A 10 NPVVFFDVSIGG---QEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTG 86 (177)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCC
T ss_pred CCEEEEEEEECC---eeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCC
Confidence 456777775432 248999999999999999999999999998 999999999 99999999985 66655
Q ss_pred ccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 308 FIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 308 ~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++||.+|+|+ ...++|+.+|+|||||+.++
T Consensus 87 ---------------------g~si~g~~f~dE-----~~~l~h~~~G~lsmAn~gp~ 118 (177)
T 1mzw_A 87 ---------------------VASIYRGPFADE-----NFKLRHSAPGLLSMANSGPS 118 (177)
T ss_dssp ---------------------CCCTTSSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred ---------------------CCccCCCcccCc-----ccccccCCCCEEEEccCCCC
Confidence 256888888874 45789999999999998654
No 23
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=99.86 E-value=7.4e-22 Score=180.36 Aligned_cols=93 Identities=33% Similarity=0.492 Sum_probs=78.8
Q ss_pred CceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhH---------------hccCCCCceeeee-CCceEecCC
Q 017769 237 GRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLV---------------QRHFYDGMEIQRA-DGFVVQTGD 300 (366)
Q Consensus 237 GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv---------------~~GfYDG~~FhRV-~gFVIQgGD 300 (366)
...+|.|+|+ .|+|+|+||++.||+||+||+.|| +.+||||+.|||| ++|||||||
T Consensus 22 ~~~~v~l~t~--------~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd 93 (191)
T 1w74_A 22 ATATATLHTN--------RGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGD 93 (191)
T ss_dssp CSEEEEEEET--------TEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECC
T ss_pred CCeEEEEEec--------ceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCC
Confidence 3578899998 799999999999999999999999 4689999999999 999999999
Q ss_pred CCCCCCCccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 301 PEGPAEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 301 p~g~g~G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++|.|. ||.+|+|| ..+.++|+++|+|||||+.++
T Consensus 94 ~~g~G~gg------------------------~g~~f~dE----~~~~l~h~~~G~lsMAn~gpn 130 (191)
T 1w74_A 94 PTGTGRGG------------------------PGYKFADE----FHPELQFDKPYLLAMANAGPG 130 (191)
T ss_dssp TTSSSSCC------------------------SSCCBCCC----CCTTCCSCSSSEEEECCSSTT
T ss_pred CCCCCCCC------------------------CCCccccc----cccCCCcCCCcEEEEeeCCCC
Confidence 98876651 34455553 146789999999999998653
No 24
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=99.86 E-value=8e-22 Score=178.17 Aligned_cols=99 Identities=22% Similarity=0.249 Sum_probs=82.3
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh-----------ccCCCCceeeee-CCceEecCCCC-CC
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ-----------RHFYDGMEIQRA-DGFVVQTGDPE-GP 304 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~-----------~GfYDG~~FhRV-~gFVIQgGDp~-g~ 304 (366)
+..|.|++.+.+ ...|+|+|+||++.||+||+||+.||+ .+||||+.|||| ++|||||||+. ++
T Consensus 9 ~~~vf~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~ 85 (179)
T 2wfi_A 9 RPRCFFDIAINN---QPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGN 85 (179)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCeEEEEEEECC---ccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCC
Confidence 456666665432 358999999999999999999999996 689999999999 99999999986 66
Q ss_pred CCCccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 305 AEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 305 g~G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
|.| +.++|+.+|+|+ .+.++|+.+|+|||||+.++
T Consensus 86 g~g---------------------g~si~g~~f~dE-----~~~~~h~~~G~lsMAn~gp~ 120 (179)
T 2wfi_A 86 GRG---------------------GESIYGGFFEDE-----SFAVKHNKEFLLSMANRGKD 120 (179)
T ss_dssp SSC---------------------CCCTTSSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred CCC---------------------CCcccCCccccc-----ccCcCcCCCeEEEEEeCCCC
Confidence 555 357899888875 45789999999999998654
No 25
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=99.86 E-value=6.7e-22 Score=176.08 Aligned_cols=97 Identities=24% Similarity=0.351 Sum_probs=80.5
Q ss_pred EEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh--ccC-CCCceeeee-CCceEecCC-CCCCCCCccCCCCC
Q 017769 240 TVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGD-PEGPAEGFIDPSTE 314 (366)
Q Consensus 240 tV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFVIQgGD-p~g~g~G~~dp~tg 314 (366)
.|.|++.+.+ ...|+|+|+||++.||+||+||++||+ +|| |||+.|||+ ++||+|||| +.+++.|
T Consensus 4 ~vf~di~i~~---t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g------- 73 (164)
T 3pmp_A 4 NVFFNISIND---KPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTG------- 73 (164)
T ss_dssp CEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSC-------
T ss_pred EEEEEEEECC---EEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCC-------
Confidence 3445544322 348999999999999999999999999 999 999999999 999999999 5566655
Q ss_pred ccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 315 KTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 315 ~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++|+.+++++ .+.++|+.+|+|||||+.++
T Consensus 74 --------------g~si~g~~~~dE-----~~~l~h~~~G~lsma~~g~~ 105 (164)
T 3pmp_A 74 --------------GKSIYGEKFADE-----NFQVKHTKPGLLSMANAGAN 105 (164)
T ss_dssp --------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECBSSTT
T ss_pred --------------CcccCCcccccc-----ccccCcCCCcEEEEeeCCCC
Confidence 357889888874 56799999999999998754
No 26
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=99.86 E-value=9.8e-22 Score=176.85 Aligned_cols=97 Identities=26% Similarity=0.383 Sum_probs=80.1
Q ss_pred eEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhH--hccC-CCCceeeee-CCceEecCC-CCCCCCCccCCCC
Q 017769 239 ATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLV--QRHF-YDGMEIQRA-DGFVVQTGD-PEGPAEGFIDPST 313 (366)
Q Consensus 239 atV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv--~~Gf-YDG~~FhRV-~gFVIQgGD-p~g~g~G~~dp~t 313 (366)
..|.|++.+.+ ...|+|+|+||++.||+||+||++|| ++|| |||+.|||| ++||||||| +.++|.|
T Consensus 12 ~~v~~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g------ 82 (172)
T 2haq_A 12 AKVYFDVMIDS---EPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTG------ 82 (172)
T ss_dssp EEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSC------
T ss_pred CeEEEEEEECC---EecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCC------
Confidence 35555555422 35899999999999999999999999 7999 999999999 999999999 5666655
Q ss_pred CccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 314 EKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 314 g~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++||.+|+|+ ++.++|. +|+|||||+.++
T Consensus 83 ---------------g~si~g~~f~dE-----~~~l~h~-~G~lsmAn~gp~ 113 (172)
T 2haq_A 83 ---------------GKSIYGEKFADE-----NLNVKHF-VGALSMANAGPN 113 (172)
T ss_dssp ---------------CCCSSSSCBCCC-----CCCSCCC-TTEEEECCSSTT
T ss_pred ---------------CccccCCcccCc-----CCCcccC-ceEEEEccCCCC
Confidence 257899888874 4678887 999999998654
No 27
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=99.86 E-value=1.1e-21 Score=178.57 Aligned_cols=101 Identities=23% Similarity=0.342 Sum_probs=82.9
Q ss_pred CCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh--ccC--------CCCceeeee-CCceEecCCCC-C
Q 017769 236 KGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF--------YDGMEIQRA-DGFVVQTGDPE-G 303 (366)
Q Consensus 236 ~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf--------YDG~~FhRV-~gFVIQgGDp~-g 303 (366)
..+..|.|++++.+ ...|+|+|+||++.||+||+||+.||+ +|| |||+.|||| ++|||||||+. +
T Consensus 17 ~~~~~v~~di~i~~---t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~ 93 (186)
T 2poy_A 17 QGNPVVYFDISIGQ---TPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRG 93 (186)
T ss_dssp -CCCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTS
T ss_pred CCCCEEEEEEeECC---EecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCC
Confidence 44567777776532 347999999999999999999999995 799 999999999 99999999986 5
Q ss_pred CCCCccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 304 PAEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 304 ~g~G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+|.| +.++||.+|+|+ .+.++|+.+|+|||||+.++
T Consensus 94 ~G~g---------------------g~si~g~~f~dE-----~~~l~h~~~G~lsMAn~gpn 129 (186)
T 2poy_A 94 DGTG---------------------GESIYGSKFRDE-----NFVYTHDAPFLLSMANAGPN 129 (186)
T ss_dssp SSSC---------------------CCCTTC-CBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred CCCC---------------------CCccCCCcccCc-----ccccccCCCcEEEEeeCCCC
Confidence 6555 257889888875 46789999999999998654
No 28
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.86 E-value=7.5e-22 Score=178.98 Aligned_cols=103 Identities=26% Similarity=0.327 Sum_probs=83.8
Q ss_pred CCCCCCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhc--c-CCCCceeeee-CCceEecCCCC-CCCC
Q 017769 232 MPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQR--H-FYDGMEIQRA-DGFVVQTGDPE-GPAE 306 (366)
Q Consensus 232 ~P~L~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~--G-fYDG~~FhRV-~gFVIQgGDp~-g~g~ 306 (366)
.|.++.++.+++++.. ...|+|+|+||++.||+||+||++||+. | ||||+.|||+ ++|||||||+. ++|.
T Consensus 8 ~p~~~~~v~~di~i~~-----~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 82 (185)
T 4fru_A 8 GPKVTVKVYFDLRIGD-----EDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGT 82 (185)
T ss_dssp EEEEEEEEEEEEEETT-----EEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCcCcEEEEEEEECC-----EecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCC
Confidence 4666666666655432 2479999999999999999999999965 7 7999999999 99999999986 5555
Q ss_pred CccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 307 GFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 307 G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
| +.++|+..|+++ ...++|+.+|+|||||+.++
T Consensus 83 g---------------------g~si~g~~f~de-----~~~~~h~~~G~lsma~~gp~ 115 (185)
T 4fru_A 83 G---------------------GKSIYGERFPDE-----NFKLKHYGPGWVSMANAGKD 115 (185)
T ss_dssp C---------------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred C---------------------CccccCCccCcc-----ccccCcCCCeEEEEeeCCCC
Confidence 4 356788888874 46789999999999998754
No 29
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=99.86 E-value=1.5e-21 Score=182.85 Aligned_cols=100 Identities=20% Similarity=0.265 Sum_probs=84.2
Q ss_pred CceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhcc--------CCCCceeeee-CCceEecCCCC-CCCC
Q 017769 237 GRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRH--------FYDGMEIQRA-DGFVVQTGDPE-GPAE 306 (366)
Q Consensus 237 GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~G--------fYDG~~FhRV-~gFVIQgGDp~-g~g~ 306 (366)
.+..|.|+|++.+ ...|+|+|+||.+.||+||+||++||+.+ ||||+.|||| ++|||||||+. ++|.
T Consensus 58 ~~~~V~~disi~~---t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~ 134 (229)
T 1z81_A 58 SNPVVFMDINLGN---NFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGS 134 (229)
T ss_dssp TCCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSC
T ss_pred CCcEEEEEEeECC---eecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCC
Confidence 4667888886432 24799999999999999999999999987 7999999999 99999999985 6665
Q ss_pred CccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 307 GFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 307 G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
| +.++|+.+|+|+ .+.++|+++|+|||||+.++
T Consensus 135 G---------------------g~siyg~~f~dE-----~~~l~h~~~G~LsMAn~gpn 167 (229)
T 1z81_A 135 G---------------------SLSIYGEKFDDE-----NFDIKHDKEGLLSMANSGPN 167 (229)
T ss_dssp C---------------------CCBTTBSCCCCC-----CCCSCCCSTTEEEECCSSSS
T ss_pred C---------------------CCccCCCccccc-----ccccccCCCcEEEeccCCCC
Confidence 5 256888888875 46789999999999998653
No 30
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=99.85 E-value=1.7e-21 Score=177.98 Aligned_cols=99 Identities=20% Similarity=0.294 Sum_probs=82.2
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh-----------ccCCCCceeeee-CCceEecCCCC-CC
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ-----------RHFYDGMEIQRA-DGFVVQTGDPE-GP 304 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~-----------~GfYDG~~FhRV-~gFVIQgGDp~-g~ 304 (366)
+..|.|++.+.+ ...|+|+|+||++.||+||+||+.||+ .+||||+.|||| ++|||||||+. ++
T Consensus 19 ~~~vf~di~i~~---t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~ 95 (192)
T 2he9_A 19 SPQCHFDIEINR---EPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGN 95 (192)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCeEEEEEEECC---EecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCC
Confidence 456666665432 348999999999999999999999995 689999999999 99999999986 56
Q ss_pred CCCccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 305 AEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 305 g~G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
|.| +.++||.+|+|+ .+.++|+.+|+|||||+.++
T Consensus 96 G~g---------------------g~siyg~~f~dE-----~~~l~h~~~G~lsMAn~gp~ 130 (192)
T 2he9_A 96 GKG---------------------GESIYGGYFKDE-----NFILKHDRAFLLSMANRGKH 130 (192)
T ss_dssp SSC---------------------CCCTTSSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred CCC---------------------CCcccCCcccCc-----cccCCCCCCeEEEEEeCCCC
Confidence 555 357899888875 45789999999999998654
No 31
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.85 E-value=1.9e-21 Score=189.04 Aligned_cols=99 Identities=22% Similarity=0.279 Sum_probs=84.6
Q ss_pred ceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhc--------c---CCCCceeeee-CCceEecCCCC-CC
Q 017769 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQR--------H---FYDGMEIQRA-DGFVVQTGDPE-GP 304 (366)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~--------G---fYDG~~FhRV-~gFVIQgGDp~-g~ 304 (366)
+..|.|+|++++ ...|+|+|+||++.||+||+||+.||+. | ||||+.|||| +||||||||+. ++
T Consensus 15 ~~~v~~~~~~~~---~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~ 91 (370)
T 1ihg_A 15 NPRVFFDVDIGG---ERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQN 91 (370)
T ss_dssp SCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCeEEEEEEECC---EecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCC
Confidence 567888887543 2479999999999999999999999987 6 7999999999 99999999998 77
Q ss_pred CCCccCCCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 305 AEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 305 g~G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
|+| +.++||.+|+|+ .+.++|+.+|+|||||+.++
T Consensus 92 g~g---------------------~~~~~~~~~~~e-----~~~~~~~~~g~l~ma~~~~~ 126 (370)
T 1ihg_A 92 GTG---------------------GESIYGEKFEDE-----NFHYKHDKEGLLSMANAGSN 126 (370)
T ss_dssp SSC---------------------CCBTTBSCBCCC-----CCCBCCCSTTEEEECCSSTT
T ss_pred CCC---------------------CCCCCCCCcCCC-----cCCcCCCCCeEEEEeeCCCC
Confidence 665 357899999875 45789999999999998754
No 32
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=99.84 E-value=3.6e-21 Score=175.91 Aligned_cols=100 Identities=25% Similarity=0.331 Sum_probs=82.0
Q ss_pred CceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh--ccC-CCCceeeee-CCceEecCCC-CCCCCCccCC
Q 017769 237 GRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGDP-EGPAEGFIDP 311 (366)
Q Consensus 237 GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFVIQgGDp-~g~g~G~~dp 311 (366)
.+..|.|++.+.+ ...|+|+|+||++.||+||+||++||+ +|| |||+.|||| ++|||||||+ .+++.|
T Consensus 26 ~~p~v~~di~i~~---t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g---- 98 (193)
T 3k2c_A 26 ASGNVYFDVYANE---ESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTG---- 98 (193)
T ss_dssp CTTCEEEEEEETT---EEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSC----
T ss_pred CCCEEEEEEeECC---EEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcC----
Confidence 3455666665422 348999999999999999999999998 888 999999999 9999999995 455554
Q ss_pred CCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 312 STEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 312 ~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++|+.+|+++ ++.++|+.+|+|||||+.++
T Consensus 99 -----------------g~si~g~~f~dE-----~~~l~h~~~G~lsmAn~gp~ 130 (193)
T 3k2c_A 99 -----------------GRSIYGEKFPDE-----NFELKHTKEGILSMANCGAH 130 (193)
T ss_dssp -----------------CCCTTSSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred -----------------CcccCCCccccc-----ccccccCCCcEEEEEeCCCC
Confidence 357788888774 56789999999999998654
No 33
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=99.84 E-value=4.3e-21 Score=174.16 Aligned_cols=101 Identities=27% Similarity=0.318 Sum_probs=82.1
Q ss_pred CCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh--ccC-CCCceeeee-CCceEecCCCC-CCCCCccC
Q 017769 236 KGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGDPE-GPAEGFID 310 (366)
Q Consensus 236 ~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFVIQgGDp~-g~g~G~~d 310 (366)
..+..|.|+|++.+ ...|+|+|+||++.||+||+||++||+ .|| |||+.|||| ++|||||||+. ++|.|
T Consensus 20 ~~~p~v~~di~i~~---~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g--- 93 (184)
T 3rdd_A 20 MVNPTVFFDIAVDG---EPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTG--- 93 (184)
T ss_dssp -CCCEEEEEEEETT---EEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSC---
T ss_pred CCCCEEEEEEeECC---EeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCC---
Confidence 34567777776432 347999999999999999999999995 466 999999999 99999999954 55544
Q ss_pred CCCCccccccchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecCCCC
Q 017769 311 PSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLV 365 (366)
Q Consensus 311 p~tg~~~~iPlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs~~~ 365 (366)
+.++|+.+|+++ ++.++|+.+|+|||||+.++
T Consensus 94 ------------------g~si~g~~~~de-----~~~l~h~~~G~lsmA~~gp~ 125 (184)
T 3rdd_A 94 ------------------GKSIYGEKFEDE-----NFILKHTGPGILSMANAGPN 125 (184)
T ss_dssp ------------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSSTT
T ss_pred ------------------CcccCCCcccCc-----ccccccCCCcEEEEEeCCCC
Confidence 356888888874 46789999999999998754
No 34
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=99.84 E-value=2e-21 Score=173.06 Aligned_cols=86 Identities=28% Similarity=0.364 Sum_probs=70.2
Q ss_pred EEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCccccc
Q 017769 241 VDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKTRTI 319 (366)
Q Consensus 241 V~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~g~G~~dp~tg~~~~i 319 (366)
|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++|||||||+... .|
T Consensus 2 v~l~T~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~-~g------------ 60 (164)
T 1lop_A 2 VTFHTN--------HGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPG-MK------------ 60 (164)
T ss_dssp EEEEET--------TEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETT-TE------------
T ss_pred EEEEeC--------CCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccC-CC------------
Confidence 678888 7999999999999999999999999999999999999 9999999998631 12
Q ss_pred cchhcccCCCCCCCCcchhhhhcccccCCCCCCCceEEEeecC
Q 017769 320 PLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARD 362 (366)
Q Consensus 320 PlEI~~~g~~~PiYg~t~ed~G~~~~~p~Lpf~~~GtLAMArs 362 (366)
..+|+.+|++|. .+.++ |.+|+|||||+
T Consensus 61 ----------~~~~g~~~~dE~----~~~l~-~~~G~lsmA~~ 88 (164)
T 1lop_A 61 ----------QKATKEPIKNEA----NNGLK-NTRGTLAMART 88 (164)
T ss_dssp ----------ECCCCCCBCCCC----CSSCC-CCTTEEEECCC
T ss_pred ----------cCCCCCcccccc----ccccc-cCccEEEEeec
Confidence 234566666542 12344 58999999985
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=99.84 E-value=3.7e-21 Score=171.47 Aligned_cols=58 Identities=33% Similarity=0.592 Sum_probs=54.9
Q ss_pred eEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHhccCCCCceeeee-CCceEecCCCCCC
Q 017769 239 ATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGP 304 (366)
Q Consensus 239 atV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFVIQgGDp~g~ 304 (366)
..|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++|||||||+.+.
T Consensus 4 ~~v~l~T~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~ 62 (167)
T 3s6m_A 4 SMVELHTN--------HGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPG 62 (167)
T ss_dssp CEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETT
T ss_pred cEEEEEeC--------CceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCC
Confidence 47889998 7999999999999999999999999999999999999 9999999998754
No 36
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=99.83 E-value=1e-20 Score=177.71 Aligned_cols=100 Identities=18% Similarity=0.256 Sum_probs=77.1
Q ss_pred cCCCCCCceEEEEEecccCCCCccceeEEEEEeCCCChhhHHHHHHhHh-------------c----c--C-CCCceeee
Q 017769 231 SMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ-------------R----H--F-YDGMEIQR 290 (366)
Q Consensus 231 ~~P~L~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~-------------~----G--f-YDG~~FhR 290 (366)
++|....+..|.|++.+.+ ...|+|+|+||++.||+||+||++||+ . | | |||+.|||
T Consensus 7 ~~p~~~~~p~v~~di~i~~---t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHR 83 (234)
T 2ose_A 7 DLPNSGKNPRVYMDIVLNN---EIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHN 83 (234)
T ss_dssp SCCCCCSSCEEEEEEEETT---EEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCE
T ss_pred ccCcCCCCCEEEEEEEECC---cccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEE
Confidence 5666777888888865432 238999999999999999999999998 3 6 8 99999999
Q ss_pred e-CCceEecCC-CCCCCCCccCCCCCccccccchhcccCCCCCCCCcc-----hhhhhcccccCCCCCCCceEEEeec
Q 017769 291 A-DGFVVQTGD-PEGPAEGFIDPSTEKTRTIPLEIMVEGEKSPFYGAT-----LEELGLYKAQTKLPFNAFGTMAMAR 361 (366)
Q Consensus 291 V-~gFVIQgGD-p~g~g~G~~dp~tg~~~~iPlEI~~~g~~~PiYg~t-----~ed~G~~~~~p~Lpf~~~GtLAMAr 361 (366)
| ++||||||| +.++|.|. .++||.+ |+ ++.++|+++|+|||||
T Consensus 84 Vi~~FmiQgGd~~~g~G~Gg---------------------~siyg~~~~p~~f~-------~~~l~h~~~G~lsMAn 133 (234)
T 2ose_A 84 VLHNNYIVSGDIYNSNGSSA---------------------GTVYCDEPIPPVFG-------DYFYPHESKGLLSLVP 133 (234)
T ss_dssp EETTTEEEECCCC----CCC---------------------CCTTTTCCBCCCCC-------SCCCCSCSTTEEEECC
T ss_pred EECCCEEEcCCccCCCCCCC---------------------ccccCCccCccccc-------CcCccCCCCCEEEEec
Confidence 9 999999999 56777662 3556654 43 2468898999999999
No 37
>1vyk_A Oxygen-evolving enhancer protein 3; photosystem II, oxygen-enhancer evolving complex, water oxidizing complex, PSBQ, OEE3, photosynthesis; 1.49A {Spinacia oleracea} PDB: 1nze_A
Probab=95.15 E-value=0.056 Score=47.54 Aligned_cols=125 Identities=14% Similarity=0.163 Sum_probs=82.0
Q ss_pred cCCCCCcccccCCCCCCCHHHH-hhh-----cCC-C-CCHhHHHHhhh---HhhhhhhhhcccCcCChhhhhhHHHHHHH
Q 017769 85 NMAMPDVSVLISGPPIKDPGAL-LRY-----ALP-I-DNKAVREVQKP---LEDITDSLKIAGVKALDPVERNVRQASRT 153 (366)
Q Consensus 85 ~~~~~~~a~l~~g~~i~d~~a~-LR~-----alP-i-~n~~ir~iQ~~---LE~i~~~Lr~~~~K~w~~~~~~v~~a~~~ 153 (366)
+++||...+||.-.-+--++-+ |.. .+| . -+..+-.|++. |.++...+-. |.|.-+...++.-+.-
T Consensus 8 ~~~~~~~~~~~g~~~~~~ard~~l~~~k~~f~~~~l~~~~a~~rIk~~a~~i~~vk~lI~k---~~W~~vrn~LR~~~~~ 84 (149)
T 1vyk_A 8 GPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDR---KAWPSLQNDLRLRASY 84 (149)
T ss_dssp CCCCCC--------------------CTTCCEECCCCHHHHHHHHHHHHHHHHTTHHHHHT---TCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCcccchhhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHhhh---ccHHHHHHHHHHhHHH
Confidence 3555666677644333333332 221 111 1 12344455554 4445555544 8999999999999999
Q ss_pred HhcccchhhccccccchHHHHHHHHHHHHhHHHHHHHHhhcCccchhhHHHHHHHHhhc
Q 017769 154 LKQGKSLIVEGLAESKKEHGMELLQKLEAGMDELQQIVEDRDRDAVAPKQKELLNYVGG 212 (366)
Q Consensus 154 l~~~~~~il~~vp~~~~~~~~~l~~~l~~~l~~l~~~~~~kd~d~~~~~~~~~L~~v~~ 212 (366)
|..+=..|..++|+++|..+.++..+|-..|++|..++..||........++++..+.+
T Consensus 85 Lr~Dl~~li~slp~~~kk~l~~La~~Lf~~le~LD~AAr~kd~~~a~~~Y~~t~~~ld~ 143 (149)
T 1vyk_A 85 LRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINE 143 (149)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888777776655543
No 38
>3zsu_A TLL2057 protein, cyanoq; photosystem II assembly, photosynthesis, extrinsic protein; 1.60A {Thermosynechococcus elongatus}
Probab=93.92 E-value=0.19 Score=43.32 Aligned_cols=93 Identities=9% Similarity=0.043 Sum_probs=73.2
Q ss_pred HhHHHHhhhHhhhhhhhhcccCcCChhhhhhHHHHHHHHhcccchhhccccccchHHHHHHHHHHHHhHHHHHHHHhhcC
Q 017769 116 KAVREVQKPLEDITDSLKIAGVKALDPVERNVRQASRTLKQGKSLIVEGLAESKKEHGMELLQKLEAGMDELQQIVEDRD 195 (366)
Q Consensus 116 ~~ir~iQ~~LE~i~~~Lr~~~~K~w~~~~~~v~~a~~~l~~~~~~il~~vp~~~~~~~~~l~~~l~~~l~~l~~~~~~kd 195 (366)
++|.+.+++|.++...+-. |.|..+..-+..=+--|.++-..|-.++++..|++|.++..+|...|.+|-.+...+|
T Consensus 28 ~~i~~~r~Rl~eL~~lI~~---~~W~~~Rn~IhGPlg~lr~~m~~l~~~Llp~dqk~A~~lak~l~~~L~~LD~AA~~~n 104 (130)
T 3zsu_A 28 RDIEKNAERFADLEVSVAK---GDWQEARNIMRGPLGEMLMDMRALNRNLLAKDQPTPTALTRALTDDFLKIDQGADLDS 104 (130)
T ss_dssp HHHHHHHTTHHHHHHHHHT---TCHHHHHHHHHTHHHHHHHHHHHHHHTSCGGGSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhh---cchHHHHHHHhchHHHHHHHHHHHHHhcCHhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3466677777777777765 8899887666655556666666777788899999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHhh
Q 017769 196 RDAVAPKQKELLNYVG 211 (366)
Q Consensus 196 ~d~~~~~~~~~L~~v~ 211 (366)
........++++....
T Consensus 105 ~~~a~k~Y~~a~adfd 120 (130)
T 3zsu_A 105 VTVAQEGFREAEADFK 120 (130)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9888777777655444
No 39
>3ls0_A SLL1638 protein, PSBQ; photosynthesis, four helix bundle; 1.80A {Synechocystis SP} PDB: 3ls1_A
Probab=91.95 E-value=0.22 Score=43.07 Aligned_cols=93 Identities=10% Similarity=0.154 Sum_probs=66.3
Q ss_pred HhHHHHhhhHhh-hhhhhhcccCcCChhhhhhHHHHHHHHhcccchhhccccccchHHHHHHHHHHHHhHHHHHHHHhhc
Q 017769 116 KAVREVQKPLED-ITDSLKIAGVKALDPVERNVRQASRTLKQGKSLIVEGLAESKKEHGMELLQKLEAGMDELQQIVEDR 194 (366)
Q Consensus 116 ~~ir~iQ~~LE~-i~~~Lr~~~~K~w~~~~~~v~~a~~~l~~~~~~il~~vp~~~~~~~~~l~~~l~~~l~~l~~~~~~k 194 (366)
++|.+.+++|.+ +...+-. |.|..+..-+..=+--|.++-..|-.++.+..|++|.++..+|...|++|-.+...+
T Consensus 30 ~~i~~ar~Rl~e~L~~lI~~---~~W~~~Rn~IhGPlg~lr~~m~~l~~~Llp~dqk~A~~lak~l~~~L~~LD~AA~~~ 106 (133)
T 3ls0_A 30 NPIAVARDGMEKRLQGLIAD---QNWVDTQTYIHGPLGQLRRDMLGLASSLLPKDQDKAKTLAKEVFGHLERLDAAAKDR 106 (133)
T ss_dssp HHHHHHHHHHHHTHHHHHHT---TCHHHHHHHHHTTTTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhHHHHHHHhhh---cchHHHHHHHhchHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 346677777777 7666665 888877644333333333333445556777777899999999999999999999999
Q ss_pred CccchhhHHHHHHHHhh
Q 017769 195 DRDAVAPKQKELLNYVG 211 (366)
Q Consensus 195 d~d~~~~~~~~~L~~v~ 211 (366)
|........++++....
T Consensus 107 n~~~a~k~Y~~a~adfd 123 (133)
T 3ls0_A 107 NGSQAKIQYQEALADFD 123 (133)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99888777777655444
No 40
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=41.33 E-value=7.9 Score=24.02 Aligned_cols=16 Identities=38% Similarity=0.638 Sum_probs=13.8
Q ss_pred HHHHHHhHhccCCCCc
Q 017769 271 AGNFVDLVQRHFYDGM 286 (366)
Q Consensus 271 a~NFv~Lv~~GfYDG~ 286 (366)
..||-.-.++|||||.
T Consensus 3 wknfwsslrkgfydge 18 (26)
T 2khf_A 3 WKNFWSSLRKGFYDGE 18 (26)
T ss_dssp HHHHHHHHHHHHTTTH
T ss_pred HHHHHHHHHhhcccch
Confidence 4689999999999985
No 41
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=36.36 E-value=26 Score=30.42 Aligned_cols=24 Identities=21% Similarity=0.134 Sum_probs=21.8
Q ss_pred ceeEEEEEeCCCChhhHHHHHHhH
Q 017769 255 ECVFRIVLDGYNAPVTAGNFVDLV 278 (366)
Q Consensus 255 ~G~I~IeLdg~~AP~Ta~NFv~Lv 278 (366)
...++++|+...||+||..|+++-
T Consensus 38 ~~~~~a~L~D~~aP~Ta~~f~~~L 61 (153)
T 2nnz_A 38 SAECEVELYEEWAPETVRAIADAL 61 (153)
T ss_dssp TEEEEECCCTTSCHHHHHHHHHTC
T ss_pred CEEEEEEEcCCCCHHHHHHHHHhC
Confidence 478999999999999999999876
No 42
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=31.44 E-value=55 Score=29.64 Aligned_cols=32 Identities=16% Similarity=0.176 Sum_probs=25.7
Q ss_pred EEEEEecccCCCCccce-eEEEEEeCCCChhhHHHHHHhH
Q 017769 240 TVDMKVKVKDNPNVDEC-VFRIVLDGYNAPVTAGNFVDLV 278 (366)
Q Consensus 240 tV~~~t~~~d~~~~~~G-~I~IeLdg~~AP~Ta~NFv~Lv 278 (366)
.+++++.. .| .++.+|..+.||+||+.|.++-
T Consensus 23 ~i~itl~~-------~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 23 YINITLEK-------RGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp EEEEEETT-------TTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred EEEEEEec-------CCeEEEEEEccccChHHHHHHHHhC
Confidence 56666653 45 4899999999999999999876
No 43
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=31.01 E-value=1e+02 Score=25.95 Aligned_cols=68 Identities=10% Similarity=0.098 Sum_probs=38.2
Q ss_pred HhHHHHhhhHhhhhhhhhcccCcCChhhhhhHHHHHHHHhcccchhhccccccchHHHHHHHHHHHHhHHHHHHHHh--h
Q 017769 116 KAVREVQKPLEDITDSLKIAGVKALDPVERNVRQASRTLKQGKSLIVEGLAESKKEHGMELLQKLEAGMDELQQIVE--D 193 (366)
Q Consensus 116 ~~ir~iQ~~LE~i~~~Lr~~~~K~w~~~~~~v~~a~~~l~~~~~~il~~vp~~~~~~~~~l~~~l~~~l~~l~~~~~--~ 193 (366)
.--.+||++|..+...++. |..+.++-+.+. ..-+. ..+..-...|.+|+..|++|++.|. .
T Consensus 31 ~Vk~EVq~sl~~l~~l~~~-----w~~l~~~~~~~s-------~~E~~----~~~~EL~~~l~sie~dLeDLe~sI~ivE 94 (130)
T 4dnd_A 31 VVRGEVQKAVNTARGLYQR-----WCELLQESAAVG-------REELD----WTTNELRNGLRSIEWDLEDLEETIGIVE 94 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----HHHC----------------CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-----HHHhhccCCCcc-------hHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456888888888776653 655544332110 01111 1233445678888999999998766 4
Q ss_pred cCccch
Q 017769 194 RDRDAV 199 (366)
Q Consensus 194 kd~d~~ 199 (366)
+|+.+|
T Consensus 95 ~np~kF 100 (130)
T 4dnd_A 95 ANPGKF 100 (130)
T ss_dssp HCHHHH
T ss_pred hCHHhc
Confidence 777654
No 44
>2c5k_T Syntaxin TLG1, T-snare affecting A late golgi compartment protein 1; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae} PDB: 2c5j_A 2c5i_T
Probab=25.24 E-value=2.6e+02 Score=22.19 Aligned_cols=25 Identities=16% Similarity=0.332 Sum_probs=15.0
Q ss_pred cchHHHHHHHHHHHHhHHHHHHHHh
Q 017769 168 SKKEHGMELLQKLEAGMDELQQIVE 192 (366)
Q Consensus 168 ~~~~~~~~l~~~l~~~l~~l~~~~~ 192 (366)
..+..-+..+.+|.+.|.+|.+.|.
T Consensus 36 ~~~~El~~~l~el~e~l~DL~~SI~ 60 (95)
T 2c5k_T 36 DQEEEIQDILKDVEETIVDLDRSII 60 (95)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555666666666666665444
No 45
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=21.81 E-value=1.4e+02 Score=25.08 Aligned_cols=19 Identities=16% Similarity=0.157 Sum_probs=9.4
Q ss_pred HHHHHHHHHhHHHHHHHHh
Q 017769 174 MELLQKLEAGMDELQQIVE 192 (366)
Q Consensus 174 ~~l~~~l~~~l~~l~~~~~ 192 (366)
..+-.+|+..|+.++.-++
T Consensus 66 ~~~~~EL~~~l~sie~dLe 84 (130)
T 4dnd_A 66 DWTTNELRNGLRSIEWDLE 84 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444555555555554443
No 46
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=21.51 E-value=2.3e+02 Score=28.43 Aligned_cols=99 Identities=12% Similarity=0.126 Sum_probs=54.7
Q ss_pred HHHhhhcCCCCCHhHHHHhhhHhhhhhhh----------hcccCcCChhhhhhHHHHHHHHhcccchhhccccccchHHH
Q 017769 104 GALLRYALPIDNKAVREVQKPLEDITDSL----------KIAGVKALDPVERNVRQASRTLKQGKSLIVEGLAESKKEHG 173 (366)
Q Consensus 104 ~a~LR~alPi~n~~ir~iQ~~LE~i~~~L----------r~~~~K~w~~~~~~v~~a~~~l~~~~~~il~~vp~~~~~~~ 173 (366)
..||++--++ .++|.++.+.|++|++.= +.--.++=..+..+ ..++++..+++|+. +.+-
T Consensus 27 d~L~kye~~V-~~~l~~L~~~l~~isn~Ts~~~~~v~~ik~~~~~~q~~~~~n----~~~~~q~Skkml~~-----~~~~ 96 (411)
T 3ghg_C 27 DFLSTYQTKV-DKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPNM----IDAATLKSRKMLEE-----IMKY 96 (411)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTCCCTTC----HHHHHHHHHHHHHH-----HHHH
T ss_pred HHHHHhccch-hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhccccCCCCcc----hhhHHHHHHHHHHH-----HHHH
Confidence 5788888888 568999999998875522 11000000000010 12223333333332 3334
Q ss_pred HHHHHHHHHhHHHHHHHHhhcCccchhhHHHHHHHHhhchhhhc
Q 017769 174 MELLQKLEAGMDELQQIVEDRDRDAVAPKQKELLNYVGGVEEDM 217 (366)
Q Consensus 174 ~~l~~~l~~~l~~l~~~~~~kd~d~~~~~~~~~L~~v~~lE~~~ 217 (366)
+.+|......|..||.+++..+. +.+++...|..|+...
T Consensus 97 ~~~~~~~~~~i~~l~~~~~~~~~-----~i~~L~~~v~~l~~~~ 135 (411)
T 3ghg_C 97 EASILTHDSSIRYLQEIYNSNNQ-----KIVNLKEKVAQLEAQC 135 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHTTS
T ss_pred HHHHHhhHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHh
Confidence 77788888888888888765532 2355555666666554
Done!