Citrus Sinensis ID: 017769

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
MAAIISCNFVTPRLPTNRIQTTHYKCNNNNGRVLSRRLLPKCCVKNHNHNPFQKLKECAISIALAAGLITGVPAIADANINANINMAMPDVSVLISGPPIKDPGALLRYALPIDNKAVREVQKPLEDITDSLKIAGVKALDPVERNVRQASRTLKQGKSLIVEGLAESKKEHGMELLQKLEAGMDELQQIVEDRDRDAVAPKQKELLNYVGGVEEDMVDGFPYEVPEEYQSMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRADGFVVQTGDPEGPAEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLVM
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEECccccccccEEEEEEEEccccccHHHHHHHHHHcccccccEEEEcccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccEEccccccccc
***IISCNFVTPRLPTNRIQTTHYKCNNNN*****RRLLPKCCVKNHNHNPFQKLKECAISIALAAGLITGVPAIADANINANINMAMPDVSVLISGPPIKDPGALLRYALPIDNKAVREVQKPLEDITDSLKIAGVKALDPV****RQ***TLKQGKSLIV************ELLQKLEAG*********************ELLNYVGGVEEDMVDGFPYEVPEEYQSMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRADGFVVQTGD**************KTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLVM
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MAAIISCNFVTPRLPTNRIQTTHYKCNNNNGRVLSRRLLPKCCVKNHNHNPFQKLKECAISIALAAGLITGVPAIADANINANINMAMPDVSVLISGPPIKDPGALLRYALPIDNKAVREVQKPLEDITDSLKIAGVKALDPVERNVRQASRTLKQGKSLIVEGLAESKKEHGMELxxxxxxxxxxxxxxxxxxxxxAVAPKQKELLNYVGGVEEDMVDGFPYEVPEEYQSMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRADGFVVQTGDPEGPAEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDCLVM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Required for the assembly and stabilization of PSII.probableQ9SSA5
Peptidyl-prolyl cis-trans isomerase, chloroplastic PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Has a regulatory effect on thylakoid protein phosphorylation.probableO49939

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
5.-.-.-Isomerases.probable
5.2.-.-Cis-trans-isomerases.probable
5.2.1.-Cis-trans Isomerases.probable
5.2.1.8Peptidylprolyl isomerase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3RFY, chain A
Confidence level:very confident
Coverage over the Query: 84-362
View the alignment between query and template
View the model in PyMOL