Query 017771
Match_columns 366
No_of_seqs 116 out of 1317
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 03:16:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017771.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017771hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0708 XthA Exonuclease III [ 100.0 1.7E-47 3.6E-52 345.9 23.6 256 42-351 1-261 (261)
2 PRK13911 exodeoxyribonuclease 100.0 7.3E-43 1.6E-47 320.9 27.5 246 42-349 1-249 (250)
3 PRK11756 exonuclease III; Prov 100.0 2.4E-37 5.2E-42 288.5 27.4 261 42-351 1-268 (268)
4 TIGR00195 exoDNase_III exodeox 100.0 2.2E-35 4.7E-40 273.2 27.2 251 42-349 1-254 (254)
5 TIGR00633 xth exodeoxyribonucl 100.0 8.2E-33 1.8E-37 255.6 26.7 250 42-350 1-255 (255)
6 PRK05421 hypothetical protein; 99.9 6.8E-22 1.5E-26 183.8 20.3 215 37-352 39-262 (263)
7 COG3568 ElsH Metal-dependent h 99.8 4.1E-20 8.9E-25 167.4 16.7 236 42-352 10-258 (259)
8 TIGR03395 sphingomy sphingomye 99.8 9.2E-19 2E-23 164.1 19.0 162 42-228 1-192 (283)
9 KOG3873 Sphingomyelinase famil 99.8 8.4E-19 1.8E-23 162.0 9.5 258 36-357 3-298 (422)
10 PRK15251 cytolethal distending 99.8 7.8E-17 1.7E-21 147.2 21.3 172 38-229 21-200 (271)
11 PTZ00297 pantothenate kinase; 99.8 3.9E-17 8.5E-22 180.0 22.7 267 38-352 7-315 (1452)
12 PLN03144 Carbon catabolite rep 99.8 5E-17 1.1E-21 164.2 19.1 162 37-228 250-470 (606)
13 KOG2756 Predicted Mg2+-depende 99.7 2E-17 4.4E-22 147.3 11.6 241 37-350 95-348 (349)
14 KOG1294 Apurinic/apyrimidinic 99.7 1E-16 2.2E-21 151.2 15.7 263 41-351 63-335 (335)
15 PF03372 Exo_endo_phos: Endonu 99.7 8.1E-17 1.8E-21 145.5 11.8 155 45-228 1-171 (249)
16 smart00476 DNaseIc deoxyribonu 99.6 1.2E-14 2.6E-19 134.9 19.1 158 40-227 16-190 (276)
17 KOG2338 Transcriptional effect 99.5 1E-12 2.2E-17 127.2 17.7 160 40-229 115-308 (495)
18 COG3021 Uncharacterized protei 99.4 1.3E-12 2.9E-17 120.7 10.4 147 38-228 85-237 (309)
19 PF14529 Exo_endo_phos_2: Endo 99.3 1.6E-11 3.4E-16 99.7 10.2 119 175-346 1-119 (119)
20 COG5239 CCR4 mRNA deadenylase, 99.0 9.9E-10 2.2E-14 102.6 10.2 44 41-84 30-86 (378)
21 smart00128 IPPc Inositol polyp 99.0 4.3E-08 9.3E-13 93.3 17.8 165 41-227 4-195 (310)
22 COG2374 Predicted extracellula 98.7 9.4E-07 2E-11 89.9 17.1 259 36-354 458-791 (798)
23 KOG0620 Glucose-repressible al 98.6 1.9E-07 4.1E-12 90.0 8.2 40 41-80 19-72 (361)
24 KOG0566 Inositol-1,4,5-triphos 97.8 0.00017 3.8E-09 75.2 11.9 164 41-226 538-727 (1080)
25 COG5411 Phosphatidylinositol 5 95.8 0.038 8.2E-07 53.8 8.2 48 310-364 292-339 (460)
26 PLN03191 Type I inositol-1,4,5 94.9 0.26 5.5E-06 50.5 10.9 36 42-80 110-148 (621)
27 PTZ00312 inositol-1,4,5-tripho 88.2 2.1 4.5E-05 40.1 7.4 54 174-227 81-142 (356)
28 KOG1294 Apurinic/apyrimidinic 69.3 16 0.00035 35.1 6.9 54 161-218 9-64 (335)
29 PLN03191 Type I inositol-1,4,5 67.8 5.2 0.00011 41.2 3.4 17 337-353 577-593 (621)
30 KOG1976 Inositol polyphosphate 30.6 86 0.0019 29.7 4.6 57 173-229 169-233 (391)
No 1
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=100.00 E-value=1.7e-47 Score=345.95 Aligned_cols=256 Identities=31% Similarity=0.532 Sum_probs=214.4
Q ss_pred cEEEEEeCccchhhhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCCC
Q 017771 42 LKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPFK 121 (366)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 121 (366)
|||+||||||++.+.+ .+.+|+.+++||||||||++.....++.. .+ ...
T Consensus 1 mkI~SwNVNgiRar~~----~~~~~l~~~~pDVlclQEtK~~~~~fp~~-----------------------~~---~~~ 50 (261)
T COG0708 1 MKIASWNVNGLRARLK----KLLDWLEEEQPDVLCLQETKAQDEQFPRE-----------------------EL---EAL 50 (261)
T ss_pred CeeEEEehhhHHHHHH----HHHHHHHHhCCCEEEEEecccCcccCCHh-----------------------HH---hhC
Confidence 7999999999999884 59999999999999999999998766521 11 117
Q ss_pred CceEEEecCCCCcceEEEEEecCCCcceeeecccccccCCCCCCCEEEEEeCCEEEEEEeecCCCC-cchhhhHHHHHHH
Q 017771 122 NYQIWWSLADSKYAGTALLVKKCFQPKKVSFSLEKTALKYEPDGRVILAEFETFYLLNTYAPNNGW-KEEENSFQRRRKW 200 (366)
Q Consensus 122 ~y~~~~~~~~~~~~Gvailsr~~i~~~~~~~~~~~~~~~~~~~~r~i~~~~~~l~v~nvh~~~~~~-~~~~~~~~~r~~~ 200 (366)
||+.++..+.+||+||||+||.+. ..+..++++ ....+.++|+|.+.+..+.|+|+|+|++.. +.+ ++.+|+.|
T Consensus 51 GY~~~~~~gqKgysGVailsr~~~--~~v~~g~~~-~~~~d~e~R~I~a~~~~~~v~~~Y~PnG~~~~~~--k~~yKl~f 125 (261)
T COG0708 51 GYHHVFNHGQKGYSGVAILSKKPP--DDVRRGFPG-EEEDDEEGRVIEAEFDGFRVINLYFPNGSSIGLE--KFDYKLRF 125 (261)
T ss_pred CceEEEecCcCCcceEEEEEccCc--hhhhcCCCC-CccccccCcEEEEEECCEEEEEEEcCCCCCCCCc--chHHHHHH
Confidence 996666567788999999999864 356677764 134567899999999999999999999997 444 58889999
Q ss_pred HHHHHHHHHhc--CCCCEEEEccCCccCCcCcCcCh-hhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhccCCeee
Q 017771 201 DKRIQEFVLQC--SGKPLIWCGDLNVSHEEIDVSHP-EFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLID 277 (366)
Q Consensus 201 ~~~l~~~l~~~--~~~p~Il~GDFN~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D 277 (366)
++.+..++.+. .+.|+|+|||||.+|.+.|.++| +.|. +.+..+|.+.+|++|..+++.| |+|
T Consensus 126 ~~~l~~~l~~l~~~~~~~vl~GD~NIap~~iDv~~~~~~~~-------------n~~~~~f~~eeR~~~~~ll~~G-~~D 191 (261)
T COG0708 126 LDALRNYLEELLKKGKPVVLCGDFNIAPEEIDVANPKKRWL-------------NEGNSGFLPEERAWFRRLLNAG-FVD 191 (261)
T ss_pred HHHHHHHHHHHhhcCCCEEEecccccCCchhcccCchhhhh-------------cCCCCCCCHHHHHHHHHHHHcc-hhh
Confidence 99999999763 66999999999999999999988 5542 3478899999999999999987 999
Q ss_pred eeecccCCCCCCcceeecCCCCCCC-CCCcceeEEEEeChhhHhhheEEEEcCCccccCCCCCCCCcceEEEecc
Q 017771 278 AYRFLHKEKDMDCGFSWSGNPIGKY-RGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELSE 351 (366)
Q Consensus 278 ~~~~~~p~~~~~~~~T~~~~~~~~~-~~~~~rID~I~~s~~~~~~~~~~~v~~~~~~~~~~~~SDH~Pv~~~l~~ 351 (366)
++|.++|.. ..||||+++...+ .+.|.||||+++|+.+..++.++.|..+.. ....+|||+||.++|++
T Consensus 192 ~~R~~~p~~---~~YTwW~YR~~~~~~n~G~RID~~l~S~~L~~~~~~a~I~~~~r--g~e~pSDHaPV~~e~~~ 261 (261)
T COG0708 192 TFRLFHPEP---EKYTWWDYRANAARRNRGWRIDYILVSPALADRLKDAGIDREVR--GWEKPSDHAPVWVELDL 261 (261)
T ss_pred hhHhhCCCC---CcccccccccchhhhcCceeEEEEEeCHHHHHHHHhcCccHHHh--cCCCCCCcCcEEEEecC
Confidence 999999987 4599999887755 468999999999999999999999986421 23567999999999874
No 2
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=100.00 E-value=7.3e-43 Score=320.91 Aligned_cols=246 Identities=35% Similarity=0.687 Sum_probs=200.9
Q ss_pred cEEEEEeCccchhhhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCCC
Q 017771 42 LKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPFK 121 (366)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 121 (366)
|||+||||||++.+.++ .+.+||.+++||||||||++...+.+. + ...
T Consensus 1 mki~swNVNgir~~~~~---~~~~~l~~~~~DIiclQEtK~~~~~~~--------------------------~---~~~ 48 (250)
T PRK13911 1 MKLISWNVNGLRACMTK---GFMDFFNSVDADVFCIQESKMQQEQNT--------------------------F---EFK 48 (250)
T ss_pred CEEEEEEeCChhHhhhh---hHHHHHHhcCCCEEEEEeecccccccc--------------------------c---ccC
Confidence 79999999999987643 699999999999999999998875321 0 127
Q ss_pred CceEEEec-CCCCcceEEEEEecCCCcceeeecccccccCCCCCCCEEEEEeCCEEEEEEeecCCCCcchhhhHHHHHHH
Q 017771 122 NYQIWWSL-ADSKYAGTALLVKKCFQPKKVSFSLEKTALKYEPDGRVILAEFETFYLLNTYAPNNGWKEEENSFQRRRKW 200 (366)
Q Consensus 122 ~y~~~~~~-~~~~~~Gvailsr~~i~~~~~~~~~~~~~~~~~~~~r~i~~~~~~l~v~nvh~~~~~~~~~~~~~~~r~~~ 200 (366)
||..++.. +..+|+||||++|.+ |..+.++++. ...+.+||+|.++++.+.|+|+|+|+++.+.+ ++++|.+|
T Consensus 49 gY~~~~~~~~~kgy~GVAi~~k~~--~~~v~~~~~~--~~~d~eGR~I~~~~~~~~l~nvY~Pn~~~~~~--r~~~K~~~ 122 (250)
T PRK13911 49 GYFDFWNCAIKKGYSGVVTFTKKE--PLSVSYGINI--EEHDKEGRVITCEFESFYLVNVYTPNSQQALS--RLSYRMSW 122 (250)
T ss_pred CceEEEEecccCccceEEEEEcCC--chheEEcCCC--CcccccCCEEEEEECCEEEEEEEecCCCCCCc--chHHHHHH
Confidence 89876643 356799999999985 4456666652 34567899999999999999999999986544 67778999
Q ss_pred HHHHHHHHHhc-CCCCEEEEccCCccCCcCcCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhccCCeeeee
Q 017771 201 DKRIQEFVLQC-SGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLIDAY 279 (366)
Q Consensus 201 ~~~l~~~l~~~-~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~ 279 (366)
.+.+.+++++. .+.++|+|||||.++.+.|.++|.. +.+..+|++.++++|..+++.| |+|++
T Consensus 123 ~~~~~~~l~~l~~~~~~Ii~GD~Nva~~~~D~~~~~~---------------~~~~~gf~~~er~~f~~~l~~g-l~D~~ 186 (250)
T PRK13911 123 EVEFKKFLKALELKKPVIVCGDLNVAHNEIDLENPKT---------------NRKNAGFSDEERGKFSELLNAG-FIDTF 186 (250)
T ss_pred HHHHHHHHHhcccCCCEEEEccccCCCChhhccChhh---------------cCCCCCcCHHHHHHHHHHHhcC-Ceehh
Confidence 99999999764 4579999999999999999988753 2356799999999999999865 99999
Q ss_pred ecccCCCCCCcceeecCCCCC-CCCCCcceeEEEEeChhhHhhheEEEEcCCccccCCCCCCCCcceEEEe
Q 017771 280 RFLHKEKDMDCGFSWSGNPIG-KYRGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLEL 349 (366)
Q Consensus 280 ~~~~p~~~~~~~~T~~~~~~~-~~~~~~~rID~I~~s~~~~~~~~~~~v~~~~~~~~~~~~SDH~Pv~~~l 349 (366)
|.++|... +.||||++... ...+.+.|||||++++++...+.++.+... ..+|||+||.++|
T Consensus 187 R~~~p~~~--~~yTww~~~~~~~~~n~g~RIDyilvs~~~~~~~~~~~i~~~------~~~SDH~Pv~~~~ 249 (250)
T PRK13911 187 RYFYPNKE--KAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIYKD------ILGSDHCPVGLEL 249 (250)
T ss_pred hhhCCCCC--CCCccCCCcCCccccCCcceEEEEEEChHHhhhEEEEEECCC------CCCCCcccEEEEe
Confidence 99999853 67999986544 335778999999999999988888888652 4679999999987
No 3
>PRK11756 exonuclease III; Provisional
Probab=100.00 E-value=2.4e-37 Score=288.52 Aligned_cols=261 Identities=23% Similarity=0.370 Sum_probs=187.9
Q ss_pred cEEEEEeCccchhhhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCCC
Q 017771 42 LKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPFK 121 (366)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 121 (366)
|||+||||+|++.+. ..+.++|++.+|||||||||+.....+.. .+.. ..
T Consensus 1 mri~T~Nv~g~~~~~----~~i~~~i~~~~pDIi~LQE~~~~~~~~~~--------------------~~~~------~~ 50 (268)
T PRK11756 1 MKFVSFNINGLRARP----HQLEAIIEKHQPDVIGLQETKVHDEMFPL--------------------EEVE------AL 50 (268)
T ss_pred CEEEEEEcCCHHHHH----HHHHHHHHhcCCCEEEEEecccccccCCH--------------------HHHH------hc
Confidence 799999999987654 56999999999999999999865432210 0011 16
Q ss_pred CceEEEecCCCCcceEEEEEecCCCcceeeecccccccCCCCCCCEEEEEeC----CEEEEEEeecCCCCcchhhhHHHH
Q 017771 122 NYQIWWSLADSKYAGTALLVKKCFQPKKVSFSLEKTALKYEPDGRVILAEFE----TFYLLNTYAPNNGWKEEENSFQRR 197 (366)
Q Consensus 122 ~y~~~~~~~~~~~~Gvailsr~~i~~~~~~~~~~~~~~~~~~~~r~i~~~~~----~l~v~nvh~~~~~~~~~~~~~~~r 197 (366)
||.+++. +..++.|||||||.|+. .....++. ...+.+++++.+.+. .+.|+|+|+|++........+..|
T Consensus 51 gy~~~~~-~~~~~~GvailSr~p~~--~~~~~~~~--~~~~~~~r~l~~~i~~~~g~~~v~n~y~P~~~~~~~~~~~~~r 125 (268)
T PRK11756 51 GYHVFYH-GQKGHYGVALLSKQTPI--AVRKGFPT--DDEEAQRRIIMATIPTPNGNLTVINGYFPQGESRDHPTKFPAK 125 (268)
T ss_pred CCEEEEe-CCCCCCEEEEEECCChH--HeEECCCC--ccccccCCEEEEEEEcCCCCEEEEEEEecCCCCCCcchhHHHH
Confidence 8877665 45568899999999763 23333331 122345788877663 599999999987643322344456
Q ss_pred HHHHHHHHHHHHh--cCCCCEEEEccCCccCCcCcCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhccCCe
Q 017771 198 RKWDKRIQEFVLQ--CSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRL 275 (366)
Q Consensus 198 ~~~~~~l~~~l~~--~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 275 (366)
.+|+..|..++.+ ..+.|+|+|||||+++.+.|..++......+ ...+..++++.+++++..+++.+ |
T Consensus 126 ~~~~~~l~~~l~~~~~~~~pvIl~GDfN~~~~~~D~~~~~~~~~~~---------~~~~~~~~~~~er~~~~~l~~~~-l 195 (268)
T PRK11756 126 RQFYQDLQNYLETELSPDNPLLIMGDMNISPTDLDIGIGEENRKRW---------LRTGKCSFLPEEREWLDRLMDWG-L 195 (268)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEeecccCCChhhcCCcccChHHh---------cccCCccCCHHHHHHHHHHHhCC-c
Confidence 7788888888865 3567999999999999888775432100000 01145678899999999888755 9
Q ss_pred eeeeecccCCCCCCcceeecCCCCCCC-CCCcceeEEEEeChhhHhhheEEEEcCCccccCCCCCCCCcceEEEecc
Q 017771 276 IDAYRFLHKEKDMDCGFSWSGNPIGKY-RGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELSE 351 (366)
Q Consensus 276 ~D~~~~~~p~~~~~~~~T~~~~~~~~~-~~~~~rID~I~~s~~~~~~~~~~~v~~~~~~~~~~~~SDH~Pv~~~l~~ 351 (366)
+|+||.++|... ..|||++.....+ .+.+.||||||+++.+..++.++.|.... ..+..+|||+||.++|++
T Consensus 196 ~D~~R~~~p~~~--~~~T~~~~~~~~~~~~~g~RIDyi~~s~~~~~~v~~~~i~~~~--~~~~~~SDH~PV~~~~~~ 268 (268)
T PRK11756 196 VDTFRQLNPDVN--DRFSWFDYRSKGFDDNRGLRIDLILATQPLAERCVETGIDYDI--RGMEKPSDHAPIWATFKL 268 (268)
T ss_pred EeehhhhCCCCC--CcccCcCCcccccccCCceEEEEEEeCHHHHhhheEeEEeHHH--hCCCCCCCcccEEEEEeC
Confidence 999999999732 6799987665443 45789999999999999889999987532 223568999999999974
No 4
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=100.00 E-value=2.2e-35 Score=273.21 Aligned_cols=251 Identities=30% Similarity=0.587 Sum_probs=187.8
Q ss_pred cEEEEEeCccchhhhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCCC
Q 017771 42 LKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPFK 121 (366)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 121 (366)
|||+||||+|++... ..+.++|..++||||||||++.....+. ..+. ...
T Consensus 1 mri~t~Ni~g~~~~~----~~~~~~l~~~~~DIi~LQE~~~~~~~~~------------------------~~~~--~~~ 50 (254)
T TIGR00195 1 MKIISWNVNGLRARL----HKGLAWLKENQPDVLCLQETKVQDEQFP------------------------LEPF--HKE 50 (254)
T ss_pred CEEEEEEcCcHHHhH----HHHHHHHHhcCCCEEEEEecccchhhCC------------------------HHHh--hcC
Confidence 799999999987655 3589999999999999999987543221 0010 116
Q ss_pred CceEEEecCCCCcceEEEEEecCCCcceeeecccccccCCCCCCCEEEEEeCCEEEEEEeecCCCCcchhhhHHHHHHHH
Q 017771 122 NYQIWWSLADSKYAGTALLVKKCFQPKKVSFSLEKTALKYEPDGRVILAEFETFYLLNTYAPNNGWKEEENSFQRRRKWD 201 (366)
Q Consensus 122 ~y~~~~~~~~~~~~Gvailsr~~i~~~~~~~~~~~~~~~~~~~~r~i~~~~~~l~v~nvh~~~~~~~~~~~~~~~r~~~~ 201 (366)
||..++.. ..++.|++|++|.+ |..+..+++ ....+.++|++.++++++.|+|+|+|+++... .+++..|.+|+
T Consensus 51 g~~~~~~~-~~g~~Gvailsr~~--~~~~~~~~~--~~~~~~~~r~i~~~~~~~~l~~~~~p~~~~~~-~~~~~~r~~~~ 124 (254)
T TIGR00195 51 GYHVFFSG-QKGYSGVAIFSKEE--PLSVRRGFG--VEEEDAEGRIIMAEFDSFLVINGYFPNGSRDD-SEKLPYKLQWL 124 (254)
T ss_pred CcEEEEec-CCCcceEEEEEcCC--cceEEECCC--CcccccCCCEEEEEECCEEEEEEEccCCCCCC-CccHHHHHHHH
Confidence 88777664 35678999999953 333444333 12344678999999999999999999965322 23456678888
Q ss_pred HHHHHHHHhc--CCCCEEEEccCCccCCcCcCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhccCCeeeee
Q 017771 202 KRIQEFVLQC--SGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLIDAY 279 (366)
Q Consensus 202 ~~l~~~l~~~--~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~ 279 (366)
+.|.+.+.+. .+.|+|+|||||+.+.+.|..++.. +.+..++++.+++.|..+++.+ |+|+|
T Consensus 125 ~~l~~~~~~~~~~~~pvIi~GDfN~~~~~~d~~~~~~---------------~~~~~~~~~~e~~~~~~l~~~~-l~D~~ 188 (254)
T TIGR00195 125 EALQNYLEKLVDKDKPVLICGDMNIAPTEIDLHSPDE---------------NRNHTGFLPEEREWLDRLLEAG-LVDTF 188 (254)
T ss_pred HHHHHHHHHHHhcCCcEEEEeecccCCChhhccChhh---------------cCCCcCcChHHHHHHHHHHHcC-CEeee
Confidence 9998888763 4689999999999999888766542 2245678899999999998755 99999
Q ss_pred ecccCCCCCCcceeecCCCCCCC-CCCcceeEEEEeChhhHhhheEEEEcCCccccCCCCCCCCcceEEEe
Q 017771 280 RFLHKEKDMDCGFSWSGNPIGKY-RGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLEL 349 (366)
Q Consensus 280 ~~~~p~~~~~~~~T~~~~~~~~~-~~~~~rID~I~~s~~~~~~~~~~~v~~~~~~~~~~~~SDH~Pv~~~l 349 (366)
|.++|.. +.|||++.+.... .+.+.||||||+++.+..++.++.+.... .....+|||+||.++|
T Consensus 189 r~~~~~~---~~~T~~~~~~~~~~~~~g~RID~i~~s~~~~~~v~~~~i~~~~--~~~~~~SDH~Pv~~~~ 254 (254)
T TIGR00195 189 RKFNPDE---GAYSWWDYRTKARDRNRGWRIDYFLVSEPLKERCVDCGIDYDI--RGSEKPSDHCPVVLEF 254 (254)
T ss_pred cccCCCC---CCCcccCCcCCccccCCceEEEEEEECHHHHhhhhEEEEcHHH--hcCCCCCCcccEEEeC
Confidence 9998874 6899987544322 35678999999999999889999997532 1124689999999985
No 5
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=8.2e-33 Score=255.56 Aligned_cols=250 Identities=33% Similarity=0.642 Sum_probs=179.2
Q ss_pred cEEEEEeCccchhhhhCCchhH-HHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCC
Q 017771 42 LKFVTWNANSLLLRVKNNWPEF-SNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPF 120 (366)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l-~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 120 (366)
|||+||||+|++...+ .+ .++|..++||||||||++.....+. ..+. ..
T Consensus 1 lri~t~Nv~g~~~~~~----~~~~~~l~~~~~DIv~LQE~~~~~~~~~------------------------~~~~--~~ 50 (255)
T TIGR00633 1 MKIISWNVNGLRARLH----KLFLDWLKEEQPDVLCLQETKVADEQFP------------------------AELF--EE 50 (255)
T ss_pred CEEEEEecccHHHHhh----ccHHHHHHhcCCCEEEEEeccCchhhCC------------------------HhHh--cc
Confidence 7999999999877653 45 8999999999999999987642111 0000 12
Q ss_pred CCceEEEecCC-CCcceEEEEEecCCCcceeeecccccccCCCCCCCEEEEEeCCEEEEEEeecCCCCcchhhhHHHHHH
Q 017771 121 KNYQIWWSLAD-SKYAGTALLVKKCFQPKKVSFSLEKTALKYEPDGRVILAEFETFYLLNTYAPNNGWKEEENSFQRRRK 199 (366)
Q Consensus 121 ~~y~~~~~~~~-~~~~Gvailsr~~i~~~~~~~~~~~~~~~~~~~~r~i~~~~~~l~v~nvh~~~~~~~~~~~~~~~r~~ 199 (366)
.||..++.... .++.|++|++|.++.. +..+++ ....+.++|++.+....+.|+++|+|+...... ..+..|.+
T Consensus 51 ~g~~~~~~~~~~~~~~G~ailsr~~~~~--~~~~~~--~~~~~~~~r~l~~~~~~~~i~~vy~p~~~~~~~-~~~~~r~~ 125 (255)
T TIGR00633 51 LGYHVFFHGAKSKGYSGVAILSKVEPLD--VRYGFG--GEEHDEEGRVITAEFDGFTVVNVYVPNGGSRGL-ERLEYKLQ 125 (255)
T ss_pred CCceEEEeecccCCcceEEEEEcCCcce--EEECCC--CCcccCCCcEEEEEECCEEEEEEEccCCCCCCc-hhHHHHHH
Confidence 68877665443 3678999999997642 223222 123455788888888899999999998773221 23445666
Q ss_pred HHHHHHHHHHh--cCCCCEEEEccCCccCCcCcCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhccCCeee
Q 017771 200 WDKRIQEFVLQ--CSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLID 277 (366)
Q Consensus 200 ~~~~l~~~l~~--~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D 277 (366)
+++.+...+.+ ..+.|+|+|||||+.+...|..++. .+.+..++.+.++..|..+++. +|+|
T Consensus 126 ~~~~l~~~~~~~~~~~~~~Il~GDFN~~~~~~d~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~-~l~D 189 (255)
T TIGR00633 126 FWDALFQYYEKELDAGKPVIICGDMNVAHTEIDLGNPK---------------ENKGNAGFTPEEREWFDELLEA-GLVD 189 (255)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEeecccCCChHHccChh---------------hcCCCCCcCHHHHHHHHHHHHc-CCEe
Confidence 77777766643 2567999999999998877665443 1224556777788889998884 4999
Q ss_pred eeecccCCCCCCcceeecCCCCCC-CCCCcceeEEEEeChhhHhhheEEEEcCCccccCCCCCCCCcceEEEec
Q 017771 278 AYRFLHKEKDMDCGFSWSGNPIGK-YRGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELS 350 (366)
Q Consensus 278 ~~~~~~p~~~~~~~~T~~~~~~~~-~~~~~~rID~I~~s~~~~~~~~~~~v~~~~~~~~~~~~SDH~Pv~~~l~ 350 (366)
+|+..+|... +.|||++..... ..+.+.||||||++..+...+.++.+... ..+|||+||.++|+
T Consensus 190 ~~~~~~~~~~--~~~T~~~~~~~~~~~~~~~rID~i~~s~~~~~~~~~~~i~~~------~~~SDH~pv~~~~~ 255 (255)
T TIGR00633 190 TFRHFNPDTE--GAYTWWDYRSGARDRNRGWRIDYFLVSEPLAERVVDSYIDSE------IRGSDHCPIVLELD 255 (255)
T ss_pred cchhhCCCCC--CcCcCcCCccCccccCCceEEEEEEECHHHHhhhcEeEECCC------CCCCCcccEEEEEC
Confidence 9999888752 479998754332 23457899999999998877888888742 23599999999984
No 6
>PRK05421 hypothetical protein; Provisional
Probab=99.89 E-value=6.8e-22 Score=183.80 Aligned_cols=215 Identities=17% Similarity=0.179 Sum_probs=120.9
Q ss_pred CCCCCcEEEEEeCccchhhhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhC
Q 017771 37 SKKDPLKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALS 116 (366)
Q Consensus 37 ~~~~~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 116 (366)
.-.++|||+||||++..... +....+.+ ..+|||||||||..... . ..+.
T Consensus 39 ~~~~~lri~t~NI~~~~~~~---~~~~l~~l-~~~~DiI~LQEv~~~~~-~-------------------------~~~~ 88 (263)
T PRK05421 39 STEERLRLLVWNIYKQQRAG---WLSVLKNL-GKDADLVLLQEAQTTPE-L-------------------------VQFA 88 (263)
T ss_pred CcCCceeEEEEEcccccccc---HHHHHHHh-ccCCCEEEEEecccCcc-h-------------------------HHHh
Confidence 34578999999998765431 13455555 88999999999975432 0 0010
Q ss_pred CCCCCCceEEE--ec-CCCCcceEEEEEecCCCcceeeecccccccCCCCCCC-EEEE--Ee---CCEEEEEEeecCCCC
Q 017771 117 SPPFKNYQIWW--SL-ADSKYAGTALLVKKCFQPKKVSFSLEKTALKYEPDGR-VILA--EF---ETFYLLNTYAPNNGW 187 (366)
Q Consensus 117 ~~~~~~y~~~~--~~-~~~~~~Gvailsr~~i~~~~~~~~~~~~~~~~~~~~r-~i~~--~~---~~l~v~nvh~~~~~~ 187 (366)
. ..+|.+.+ .. ...+++|++||||.|+... ..+....+.. ...| ++.+ +. ..+.|+|+|+.+...
T Consensus 89 ~--~~~~~~~~~~~~~~~~~~~GvaiLSR~pi~~~---~~~~~~~~~~-~~~r~~l~a~~~~~~g~~l~v~ntHl~~~~~ 162 (263)
T PRK05421 89 T--ANYLAADQAPAFVLPQHPSGVMTLSKAHPVYC---CPLREREPWL-RLPKSALITEYPLPNGRTLLVVNIHAINFSL 162 (263)
T ss_pred h--cccchHHhccccccCCCccceeEeeeccccee---eccCCCCccc-cCcceeEEEEEEeCCCCEEEEEEECccccCc
Confidence 0 02332211 11 1334779999999986422 1111111111 1122 2333 33 249999999987643
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCcCcCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHH
Q 017771 188 KEEENSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFG 267 (366)
Q Consensus 188 ~~~~~~~~~r~~~~~~l~~~l~~~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (366)
.. ..|..+++.+.+.+.+ ...|+|+|||||+..... ...+.
T Consensus 163 ~~-----~~r~~q~~~l~~~~~~-~~~p~Il~GDFN~~~~~~---------------------------------~~~l~ 203 (263)
T PRK05421 163 GV-----DVYSKQLEPIGDQIAH-HSGPVILAGDFNTWSRKR---------------------------------MNALK 203 (263)
T ss_pred Ch-----HHHHHHHHHHHHHHHh-CCCCEEEEcccccCcccc---------------------------------hHHHH
Confidence 21 1244456667777754 356999999999743210 01234
Q ss_pred hhhccCCeeeeeecccCCCCCCcceeecCCCCCCCCCCcceeEEEEeChhhHhhheEEEEcCCccccCCCCCCCCcceEE
Q 017771 268 AILKEGRLIDAYRFLHKEKDMDCGFSWSGNPIGKYRGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSL 347 (366)
Q Consensus 268 ~~l~~~~l~D~~~~~~p~~~~~~~~T~~~~~~~~~~~~~~rID~I~~s~~~~~~~~~~~v~~~~~~~~~~~~SDH~Pv~~ 347 (366)
.++...++.+.+ |..... ....+.+|||||++ ++ .+.++.+.. ...|||+||.+
T Consensus 204 ~~~~~~~l~~~~--------------~~~~~~--~~~~~~~ID~I~~~-~~--~v~~~~v~~-------~~~SDH~Pv~a 257 (263)
T PRK05421 204 RFARELGLKEVR--------------FTDDQR--RRAFGRPLDFVFYR-GL--NVSKASVLV-------TRASDHNPLLV 257 (263)
T ss_pred HHHHHcCCCccC--------------cCCccc--ccccCCCcceEEEC-Cc--EEEEEEcCC-------CCCCCccCEEE
Confidence 444433344321 111000 00013699999985 33 356666653 46799999999
Q ss_pred EeccC
Q 017771 348 ELSEA 352 (366)
Q Consensus 348 ~l~~~ 352 (366)
+|.+.
T Consensus 258 ~l~l~ 262 (263)
T PRK05421 258 EFSLK 262 (263)
T ss_pred EEEec
Confidence 99875
No 7
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=99.85 E-value=4.1e-20 Score=167.35 Aligned_cols=236 Identities=20% Similarity=0.231 Sum_probs=129.6
Q ss_pred cEEEEEeCc-cchh-hhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCC
Q 017771 42 LKFVTWNAN-SLLL-RVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPP 119 (366)
Q Consensus 42 lrI~s~Ni~-g~~~-~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 119 (366)
++|+||||+ ++.. +.+-+.+.+.+.+++..+|||||||+......... -+.++ .....+. .
T Consensus 10 ~~v~TyNih~~~~~~d~r~~~~r~~~~i~~~~~Div~LQEv~~~~~~~r~------~~~~~--------~~~~~~~---~ 72 (259)
T COG3568 10 FKVLTYNIHKGFGAFDRRFDLPRIAEVIREVGADIVALQEVDGAFGRHRD------GLLDL--------PHLLGRL---G 72 (259)
T ss_pred eEEEEEEEEEccCccCceecHHHHHHHHHhhccCeeeeeccccccccccc------ccchh--------HHHHHHh---c
Confidence 899999995 3333 33334578999999999999999999753211110 00000 0111111 1
Q ss_pred CCCceEEEec----CCCCcceEEEEEecCCCcceeeecccccccCCCCCCC-EEEE--Ee---CCEEEEEEeecCCCCcc
Q 017771 120 FKNYQIWWSL----ADSKYAGTALLVKKCFQPKKVSFSLEKTALKYEPDGR-VILA--EF---ETFYLLNTYAPNNGWKE 189 (366)
Q Consensus 120 ~~~y~~~~~~----~~~~~~Gvailsr~~i~~~~~~~~~~~~~~~~~~~~r-~i~~--~~---~~l~v~nvh~~~~~~~~ 189 (366)
+..|.++... ...+..|++|||+.++..+. ...++. . ...+.| .+.+ +. +.+.|+|+|+.-..
T Consensus 73 ~~~~~~~~~~~~a~~~~~~~GnaiLS~~pi~~v~-~~~lp~--~-~~~~~Rgal~a~~~~~~g~~l~V~~~HL~l~~--- 145 (259)
T COG3568 73 LAPYWWSGAAFGAVYGEGQHGNAILSRLPIRDVE-NLALPD--P-TGLEPRGALLAEIELPGGKPLRVINAHLGLSE--- 145 (259)
T ss_pred CCccccchhhhhhhcccceeeeEEEecCcccchh-hccCCC--C-CCCCCceeEEEEEEcCCCCEEEEEEEeccccH---
Confidence 0111111111 23346799999988764221 122331 0 011222 3333 32 27999999998322
Q ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCcCcCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhh
Q 017771 190 EENSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAI 269 (366)
Q Consensus 190 ~~~~~~~r~~~~~~l~~~l~~~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (366)
..|.++++.|.+.+......|+|+|||||+.+.+.++.... .. .
T Consensus 146 -----~~R~~Q~~~L~~~~~l~~~~p~vl~GDFN~~p~s~~yr~~~-------------------~~------------~ 189 (259)
T COG3568 146 -----ESRLRQAAALLALAGLPALNPTVLMGDFNNEPGSAEYRLAA-------------------RS------------P 189 (259)
T ss_pred -----HHHHHHHHHHHhhccCcccCceEEEccCCCCCCCccceecc-------------------CC------------c
Confidence 12455566666643223445999999999988876542110 00 0
Q ss_pred hc-cCCeeeeeecccCCCCCCcceeecCCCCCCCCCCcceeEEEEeChhhHhhheEEEEcCCccccCCCCCCCCcceEEE
Q 017771 270 LK-EGRLIDAYRFLHKEKDMDCGFSWSGNPIGKYRGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLE 348 (366)
Q Consensus 270 l~-~~~l~D~~~~~~p~~~~~~~~T~~~~~~~~~~~~~~rID~I~~s~~~~~~~~~~~v~~~~~~~~~~~~SDH~Pv~~~ 348 (366)
++ ...+.+.+....+. ..-||+++.. ..+|||||++.++. +....+..+.. ....|||+||.++
T Consensus 190 ~~~~~~~~~~~~~a~~~----~~~tfps~~p------~lriD~Ifvs~~~~--i~~~~v~~~~~---a~~aSDHlPl~ae 254 (259)
T COG3568 190 LNAQAALTGAFAPAVGR----TIRTFPSNTP------LLRLDRIFVSKELA--IRSVHVLTDRL---ARVASDHLPLLAE 254 (259)
T ss_pred hhhccccccccCcccCc----ccCCCCCCCc------cccccEEEecCccc--EEEEEeecCCC---ccccccccceEEE
Confidence 10 01133333332221 1135655321 25999999999876 45566655422 2467999999999
Q ss_pred eccC
Q 017771 349 LSEA 352 (366)
Q Consensus 349 l~~~ 352 (366)
|.++
T Consensus 255 L~~~ 258 (259)
T COG3568 255 LRLK 258 (259)
T ss_pred EecC
Confidence 9865
No 8
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=99.82 E-value=9.2e-19 Score=164.09 Aligned_cols=162 Identities=18% Similarity=0.117 Sum_probs=89.8
Q ss_pred cEEEEEeCccchh------hhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhh
Q 017771 42 LKFVTWNANSLLL------RVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRAL 115 (366)
Q Consensus 42 lrI~s~Ni~g~~~------~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 115 (366)
||||||||+.+.. ....|.+.+...+...+||||||||+...... ..+++.|
T Consensus 1 lkVmtyNv~~l~~~~~~~~g~~~R~~~i~~~~~~~~~DVV~LQEv~~~~~~----------------------~~l~~~L 58 (283)
T TIGR03395 1 IKILSHNVYMLSTNLYPNWGQMERADLIASADYIKNQDVVILNEAFDTSAS----------------------KRLLDNL 58 (283)
T ss_pred CeEEEEEeeeecccccCCccHhHHHHHHHHhhcccCCCEEEEecccchHHH----------------------HHHHHHH
Confidence 6899999964321 11223356777788889999999999754310 0112222
Q ss_pred CCCCCCCceEEEe---------------cCCCCcceEEEEEecCCCcce-eeecccccccCCCCCCCEEEEEeC----CE
Q 017771 116 SSPPFKNYQIWWS---------------LADSKYAGTALLVKKCFQPKK-VSFSLEKTALKYEPDGRVILAEFE----TF 175 (366)
Q Consensus 116 ~~~~~~~y~~~~~---------------~~~~~~~Gvailsr~~i~~~~-~~~~~~~~~~~~~~~~r~i~~~~~----~l 175 (366)
... .+|..... .......|++||||.||.... ..+.......... ...++.+++. .+
T Consensus 59 ~~~--yp~~~~~~g~~~~g~~~~~g~~~~~~~~~~G~~iLSr~Pi~~~~~~~f~~~~~~d~~~-~kg~l~a~i~~~g~~~ 135 (283)
T TIGR03395 59 REE--YPYQTDVIGRSKKGWDKTLGNYSSSALEDGGVAIVSKWPIEEKIQYIFNKGCGADNLS-NKGFAYVKINKNGKKF 135 (283)
T ss_pred Hhh--CCceEeecccccccchhccccccccCccCCEEEEEECCCccccEEEEccCCCCCcccc-CCceEEEEEecCCeEE
Confidence 110 12221111 011235699999999985332 1121111001111 1224444432 59
Q ss_pred EEEEEeecCCCCcchhhh-HHHHHHHHHHHHHHHHhc---CCCCEEEEccCCccCCc
Q 017771 176 YLLNTYAPNNGWKEEENS-FQRRRKWDKRIQEFVLQC---SGKPLIWCGDLNVSHEE 228 (366)
Q Consensus 176 ~v~nvh~~~~~~~~~~~~-~~~r~~~~~~l~~~l~~~---~~~p~Il~GDFN~~~~~ 228 (366)
.|+++|+.+......... ...|..++++|.+++.+. .+.|+|||||||..+.+
T Consensus 136 ~v~~THL~~~~~~~~~~~~~~~R~~Q~~~i~~~i~~~~~~~~~pvIl~GDfN~~~~s 192 (283)
T TIGR03395 136 HVIGTHLQAQDSMCSKLGPASIRANQLNEIQDFIDSKNIPKDETVLIGGDLNVNKGS 192 (283)
T ss_pred EEEEeCCCCCcccccccccHHHHHHHHHHHHHHHhhccCCCCceEEEEeeCCCCCCC
Confidence 999999987643211011 234677788888888642 46789999999986643
No 9
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]
Probab=99.77 E-value=8.4e-19 Score=162.03 Aligned_cols=258 Identities=19% Similarity=0.154 Sum_probs=144.4
Q ss_pred cCCCCCcEEEEEeCccchhhhh---CCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHH
Q 017771 36 NSKKDPLKFVTWNANSLLLRVK---NNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILM 112 (366)
Q Consensus 36 ~~~~~~lrI~s~Ni~g~~~~~~---~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 112 (366)
+...-.|||+++|++|+.-..+ .++..+.+++....+||+.|||++...+ .+.+.
T Consensus 3 n~~a~~lriltlN~Wgip~~Sk~R~~Rm~~~g~~l~~E~yDiv~LQEvWs~eD----------------------~~~L~ 60 (422)
T KOG3873|consen 3 NMLALELRILTLNIWGIPYVSKDRRHRMDAIGDELASEKYDIVSLQEVWSQED----------------------FEYLQ 60 (422)
T ss_pred cchhheeeeeEeeccccccccchhHHHHHHHhHHHhhcccchhhHHHHHHHHH----------------------HHHHH
Confidence 3456689999999999753222 3446788899999999999999997642 23333
Q ss_pred HhhCCCCCCCce-EEEecCCCCcceEEEEEecCCCcce-eeecccccc------cCCCCCCCEEE-EEeC--CEEEEEEe
Q 017771 113 RALSSPPFKNYQ-IWWSLADSKYAGTALLVKKCFQPKK-VSFSLEKTA------LKYEPDGRVIL-AEFE--TFYLLNTY 181 (366)
Q Consensus 113 ~~l~~~~~~~y~-~~~~~~~~~~~Gvailsr~~i~~~~-~~~~~~~~~------~~~~~~~r~i~-~~~~--~l~v~nvh 181 (366)
+..+.. ..|. +|.+ +-. .+|+|+|||.||..+. -.+.+.+-. +.....+.-++ +... .+.++|+|
T Consensus 61 ~~~ss~--yPysh~FHS-Gim-GaGL~vfSK~PI~~t~~~~y~lNG~p~~i~rGDWf~GK~Vgl~~l~~~g~~v~~yntH 136 (422)
T KOG3873|consen 61 SGCSSV--YPYSHYFHS-GIM-GAGLCVFSKHPILETLFHRYSLNGYPHAIHRGDWFGGKGVGLTVLLVGGRMVNLYNTH 136 (422)
T ss_pred Hhcccc--CchHHhhhc-ccc-cCceEEeecCchhhhhhhccccCCccceeeeccccccceeEEEEEeeCCEEeeeeehh
Confidence 333211 3443 3433 222 6799999999984221 223333310 11111221121 2222 46777777
Q ss_pred ecCCCCcchhhhH-HHHHHHHHHHHHHHHh--cCCCCEEEEccCCccCCcCcCcChhhhhhhhcCCCCCCCCCCCCCCCC
Q 017771 182 APNNGWKEEENSF-QRRRKWDKRIQEFVLQ--CSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGF 258 (366)
Q Consensus 182 ~~~~~~~~~~~~~-~~r~~~~~~l~~~l~~--~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (366)
+.+....... .| .-|..++=++.++++. .++.-+|++||||+.|.+..+.-
T Consensus 137 LHAeY~rq~D-~YL~HR~~QAwdlaqfi~~t~q~~~vVI~~GDLN~~P~dl~~~l------------------------- 190 (422)
T KOG3873|consen 137 LHAEYDRQND-EYLCHRVAQAWDLAQFIRATRQNADVVILAGDLNMQPQDLGHKL------------------------- 190 (422)
T ss_pred ccccccccCc-hhhhHHHHHHHHHHHHHHHHhcCCcEEEEecCCCCCccccceee-------------------------
Confidence 6665533221 23 2243334466777765 37888999999999888754321
Q ss_pred CHHHHHHHHhhhccCCeeeeeecccCCCCC--C-----------------cceeecCCCCCCC-CCCcceeEEEEeChhh
Q 017771 259 TIAERKRFGAILKEGRLIDAYRFLHKEKDM--D-----------------CGFSWSGNPIGKY-RGKRMRIDYFIVSEEL 318 (366)
Q Consensus 259 ~~~~~~~~~~~l~~~~l~D~~~~~~p~~~~--~-----------------~~~T~~~~~~~~~-~~~~~rID~I~~s~~~ 318 (366)
+-+.+|+|+|+..++.... + ...||.+. .... ...+.||||+|++++.
T Consensus 191 -----------l~~a~l~daw~~~h~~q~e~~~~r~s~~~~l~~g~tcd~~~N~y~~a-qk~~ddp~~~RiDYvl~k~~~ 258 (422)
T KOG3873|consen 191 -----------LLSAGLVDAWTSLHLDQCESDSFRLSEDKELVEGNTCDSPLNCYTSA-QKREDDPLGKRIDYVLVKPGD 258 (422)
T ss_pred -----------eeccchhhhHhhhchhhhcCcccccchhhhhhcCCcccCcchhhhHH-HhCCCCccceeeeEEEEcCcc
Confidence 1122244444444333210 0 11233320 1111 1237999999998875
Q ss_pred H-hhheEEEEcCCccccCCCCCCCCcceEEEeccCCCchh
Q 017771 319 K-DRIIACEMQGHGIELEGFYGSDHCPVSLELSEASSDSE 357 (366)
Q Consensus 319 ~-~~~~~~~v~~~~~~~~~~~~SDH~Pv~~~l~~~~~~~~ 357 (366)
. .....+++.....+..+-..|||.+++++|.+...+.+
T Consensus 259 ~~~~~a~~~~t~~rvP~~d~s~SDH~Al~a~L~I~~~~~~ 298 (422)
T KOG3873|consen 259 CNAKIAEVEFTEPRVPGEDCSYSDHEALMATLKIFKQPPR 298 (422)
T ss_pred eEEEeeeEEecCCCCCCCCCCccchhhheeEEEeecCCCC
Confidence 3 22334444332233334577999999999998765444
No 10
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=99.77 E-value=7.8e-17 Score=147.19 Aligned_cols=172 Identities=13% Similarity=0.154 Sum_probs=99.0
Q ss_pred CCCCcEEEEEeCccchhhhhCCch-hHHHHHhhc-CCcEEEEeeeecCCCCCCCCCccccccchhhhh--hHHHHHHHHH
Q 017771 38 KKDPLKFVTWNANSLLLRVKNNWP-EFSNFITTF-DPDVIALQEVRMPAAGSKDAPKNHQELKDDTKA--SREEKLILMR 113 (366)
Q Consensus 38 ~~~~lrI~s~Ni~g~~~~~~~~~~-~l~~~i~~~-~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ 113 (366)
.-..+++.|||++|-......+|. .+..+|... ++||+++||+-.........++ +-+..-. +..|-.+
T Consensus 21 ~~~~~~~~twn~qg~s~~~~~kw~~~v~~l~~~~~~~DIla~QEags~p~~a~~~~~----~~~~~g~~~~v~ey~w--- 93 (271)
T PRK15251 21 NLEDYKVATWNLQGSSASTESKWNVNVRQLLSGENPADILMVQEAGSLPSSAVPTGR----HVQPGGVGIPIDEYTW--- 93 (271)
T ss_pred ccccceEEEeecCCCCCCChhhhhhhHHHHhcCCCCCCEEEEEecCCCccccccccc----cccccccccCcccEEE---
Confidence 344689999999997543333454 578888864 6999999998654432111000 0000000 0000000
Q ss_pred hhCCCCCCCceEEEecCC---CCcceEEEEEecCCCcceeeecccccccCCCCCCCEEEEEeCCEEEEEEeecCCCCcch
Q 017771 114 ALSSPPFKNYQIWWSLAD---SKYAGTALLVKKCFQPKKVSFSLEKTALKYEPDGRVILAEFETFYLLNTYAPNNGWKEE 190 (366)
Q Consensus 114 ~l~~~~~~~y~~~~~~~~---~~~~Gvailsr~~i~~~~~~~~~~~~~~~~~~~~r~i~~~~~~l~v~nvh~~~~~~~~~ 190 (366)
.+.....+++.+++.... .+..|+||+||.++.. .+.++. .....+.++.++++++.++++|+.+.+. .+
T Consensus 94 ~l~~~srpgm~YiY~~aiD~~ggr~glAIlSr~~a~~---~~~l~~---p~~~~Rpilgi~i~~~~ffstH~~a~~~-~d 166 (271)
T PRK15251 94 NLGTRSRPNQVYIYYSRVDVGANRVNLAIVSRRRADE---VIVLRP---PTVASRPIIGIRIGNDVFFSIHALANGG-TD 166 (271)
T ss_pred EccCccCCCceEEEEecccCCCCceeEEEEecccccc---eEEecC---CCCcccceEEEEecCeEEEEeeecCCCC-cc
Confidence 011111245554443332 2466999999997532 122321 1222355777888889999999999852 22
Q ss_pred hhhHHHHHHHHHHHHHHHH-hcCCCCEEEEccCCccCCcC
Q 017771 191 ENSFQRRRKWDKRIQEFVL-QCSGKPLIWCGDLNVSHEEI 229 (366)
Q Consensus 191 ~~~~~~r~~~~~~l~~~l~-~~~~~p~Il~GDFN~~~~~~ 229 (366)
+.+.++.+.+... .....|+|||||||..|.+.
T Consensus 167 ------a~aiV~~I~~~f~~~~~~~pw~I~GDFNr~P~sl 200 (271)
T PRK15251 167 ------AGAIVRAVHNFFRPNMRHINWMIAGDFNRSPDRL 200 (271)
T ss_pred ------HHHHHHHHHHHHhhccCCCCEEEeccCCCCCcch
Confidence 2334666666665 34557999999999887753
No 11
>PTZ00297 pantothenate kinase; Provisional
Probab=99.76 E-value=3.9e-17 Score=179.98 Aligned_cols=267 Identities=14% Similarity=0.143 Sum_probs=130.9
Q ss_pred CCCCcEEEEEeCccchhh-hhCCchhHHHHHhhc-CCcEEEEeeeecCCCC-CCCCCccccccchhhhhhHHHHHHHHHh
Q 017771 38 KKDPLKFVTWNANSLLLR-VKNNWPEFSNFITTF-DPDVIALQEVRMPAAG-SKDAPKNHQELKDDTKASREEKLILMRA 114 (366)
Q Consensus 38 ~~~~lrI~s~Ni~g~~~~-~~~~~~~l~~~i~~~-~~DIv~LQEv~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 114 (366)
...+|||+|||++.+... .....+.+..+|+.. ++|||||||+...... ++.. .+. +.-..+...
T Consensus 7 ~~~~l~VlTyNv~~~~~~~~~~~~~ri~~~i~~l~~~DIv~lQEvf~~~~~~~~~~----~~~--------~~~~~~~~~ 74 (1452)
T PTZ00297 7 GCAQARVLSYNFNILPRGCGGFQHERIETFLASVDAYDVVLLQEVYAASVLPYFLQ----KQL--------CFQKMLVDE 74 (1452)
T ss_pred CCCceEEEEEEccccCCCcccccHHHHHHHHHhccCCCEEEEeccccccccccccc----ccc--------hhhHHHHHH
Confidence 345799999999744211 011226788899884 7899999999865311 1100 000 000111222
Q ss_pred hCCCCCCCceEEEec-CC---C-------CcceEEEEEecCCCcceeeeccccccc--CCCCCC-CEEEEEe-------C
Q 017771 115 LSSPPFKNYQIWWSL-AD---S-------KYAGTALLVKKCFQPKKVSFSLEKTAL--KYEPDG-RVILAEF-------E 173 (366)
Q Consensus 115 l~~~~~~~y~~~~~~-~~---~-------~~~Gvailsr~~i~~~~~~~~~~~~~~--~~~~~~-r~i~~~~-------~ 173 (366)
+.. .||.++... .. . ...|+||+||+||... ....++.... .....| ....+++ .
T Consensus 75 l~~---~g~~~~~~~~~~~~~~~~~~~~~~~~G~AILSR~PI~~~-~~~~l~~~~~~~~~~~RG~L~a~I~vp~~~g~~~ 150 (1452)
T PTZ00297 75 LKA---RGFHHYVISKQPSYLTMLRYNVCSDNGLIIASRFPIWQR-GSYTFRNHERGEQSVRRGCLFAEVEVPLAEGGSQ 150 (1452)
T ss_pred HHh---cCCceeEeecCccccccccCccccCCEEEEEECCChhhc-eeeecCcccccccccccceEEEEEEccccCCCCc
Confidence 221 466544322 11 1 3569999999998432 2233321000 001112 1223333 2
Q ss_pred CEEEEEEeecCCCCcchhhhHHHHHHHHHHHHHHHHh-----------cCCCCEEEEccCCccCCcCcCcChhhhhhhhc
Q 017771 174 TFYLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQ-----------CSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKL 242 (366)
Q Consensus 174 ~l~v~nvh~~~~~~~~~~~~~~~r~~~~~~l~~~l~~-----------~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~ 242 (366)
.+.|+++|+........ |.++++++.+++.. ....|+||+||||.....+ .+
T Consensus 151 ~v~v~~tHL~~~~~~~~------R~~Q~~ql~~~i~~~i~~~~~~~~~~~~~PvILaGDFN~~~~~~--~~--------- 213 (1452)
T PTZ00297 151 RIVFFNVHLRQEDSLPS------TSSQVQETRRFVESVIANVYEQNNDGAEIPFVIAGDFNINGIDP--HN--------- 213 (1452)
T ss_pred eEEEEEeCCCCCCCcch------HHHHHHHHHHHHHHhhhhhcccccCCCCCCEEEEeeCCCccccc--cc---------
Confidence 59999999987754322 23334444444432 1456999999999742110 00
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHh-hhc-cCCeeeeeecccCCCC-CCcceeecC-C-CCCCCCCCcceeEEEEeChh
Q 017771 243 NGYVPPNKEDWGQPGFTIAERKRFGA-ILK-EGRLIDAYRFLHKEKD-MDCGFSWSG-N-PIGKYRGKRMRIDYFIVSEE 317 (366)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~-~~~l~D~~~~~~p~~~-~~~~~T~~~-~-~~~~~~~~~~rID~I~~s~~ 317 (366)
.+....+...|.. +.. ..++.|++........ +.+..+|.. . +..+......||||||+++.
T Consensus 214 -------------~~~~s~e~~~ml~~l~~~~~~l~dv~~~~~~~~~~T~p~~~~fP~~~p~~~~~~~~~riD~Ifv~~~ 280 (1452)
T PTZ00297 214 -------------GGHPTKRFQELLNELQDLGSGVREVIYDETGQHPPTRPPILFFPEQSKLERYSSTPQRQDYFFVTPC 280 (1452)
T ss_pred -------------cCCccHHHHHHHHHhhhccccHhHHhHhhcCCCCCCCCccccccccCccccccCCCcceeEEEEeCC
Confidence 0000011111221 111 1224444332221110 012233322 1 11111112369999999976
Q ss_pred hHhhheEEEEcCCcc--ccCCCCCCCCcceEEEeccC
Q 017771 318 LKDRIIACEMQGHGI--ELEGFYGSDHCPVSLELSEA 352 (366)
Q Consensus 318 ~~~~~~~~~v~~~~~--~~~~~~~SDH~Pv~~~l~~~ 352 (366)
+. +..+.+..... ..++.++|||+||.++|.+.
T Consensus 281 v~--v~~~~v~~~~~~~~~~~~~~SDH~Pv~a~l~l~ 315 (1452)
T PTZ00297 281 VQ--VEKPRIEKFVVSSRRPYTYLSDHFGVSARLTLP 315 (1452)
T ss_pred ce--EEEEEEecccccCCCCCCCcCcCccEEEEEEeC
Confidence 54 56666643210 12346799999999999984
No 12
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=99.75 E-value=5e-17 Score=164.24 Aligned_cols=162 Identities=19% Similarity=0.239 Sum_probs=88.3
Q ss_pred CCCCCcEEEEEeCcc-c--h-----------hhhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhh
Q 017771 37 SKKDPLKFVTWNANS-L--L-----------LRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTK 102 (366)
Q Consensus 37 ~~~~~lrI~s~Ni~g-~--~-----------~~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~ 102 (366)
+...++|||||||-. . . ..+..|...|.+.|..++||||||||+..... .+
T Consensus 250 ~~~~~frVmSYNILAd~ya~~dly~ycp~~aL~W~yRk~lIl~EI~~~~aDIICLQEV~~~~~------------~d--- 314 (606)
T PLN03144 250 SSAGTFTVLSYNILSDLYATSDMYSYCPPWALSWTYRRQNLLREIVGYRADILCLQEVQSDHF------------EE--- 314 (606)
T ss_pred CCCCCEEEEEeeeccccccCcccccCCCccccCHHHHHHHHHHHHHhcCCCEEEEeecCHHHH------------HH---
Confidence 346689999999931 1 0 01223447799999999999999999965431 00
Q ss_pred hhHHHHHHHHHhhCCCCCCCceEEEecCCC--------CcceEEEEEecCC-Ccce---eeecc-----ccccc----CC
Q 017771 103 ASREEKLILMRALSSPPFKNYQIWWSLADS--------KYAGTALLVKKCF-QPKK---VSFSL-----EKTAL----KY 161 (366)
Q Consensus 103 ~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~--------~~~Gvailsr~~i-~~~~---~~~~~-----~~~~~----~~ 161 (366)
.+...|. ..||..++..... +..|+|||.|..- ..++ +.+.- ..... ..
T Consensus 315 -------~~~p~L~---~~GY~Gv~~~Kt~~~~~~~~~~~DGcAIFyr~drFeLv~~~~ief~~~~lslt~~~~~s~~~~ 384 (606)
T PLN03144 315 -------FFAPELD---KHGYQALYKKKTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVEFNKAAQSLTEALIPSAQKK 384 (606)
T ss_pred -------HHHhhhh---hcCceEEEeCCCCccccccccCCceeEEEEECcceEEEEeeeeeccchhhccCccccccccch
Confidence 0111232 1688876654211 2458999998752 1111 11110 00000 00
Q ss_pred CCCCC--------EEEEEeC-------------CEEEEEEeecCCCCcchhhhHHHHHHHHHHHHHHHHh---cCCCCEE
Q 017771 162 EPDGR--------VILAEFE-------------TFYLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQ---CSGKPLI 217 (366)
Q Consensus 162 ~~~~r--------~i~~~~~-------------~l~v~nvh~~~~~~~~~~~~~~~r~~~~~~l~~~l~~---~~~~p~I 217 (366)
+...| ++.++.. .|.|+|+|+-......+ . |+.++..|.+.+++ ..+.|+|
T Consensus 385 ~~l~Rl~kdNVAliv~Le~k~~~~~~~~~~~~~~l~VaNTHL~~~p~~~d-v----Rl~Q~~~Ll~~l~~~~~~~~~PvI 459 (606)
T PLN03144 385 AALNRLLKDNVALIVVLEAKFGNQGADNGGKRQLLCVANTHIHANQELKD-V----KLWQVHTLLKGLEKIAASADIPML 459 (606)
T ss_pred hhhhhhccCcEEEEEEEEEecccccccCCCCccEEEEEEeeeccCCccch-h----HHHHHHHHHHHHHHHhhcCCCceE
Confidence 01112 1222221 38999999954432111 1 33334445455543 2578999
Q ss_pred EEccCCccCCc
Q 017771 218 WCGDLNVSHEE 228 (366)
Q Consensus 218 l~GDFN~~~~~ 228 (366)
||||||+.+.+
T Consensus 460 lcGDFNS~P~S 470 (606)
T PLN03144 460 VCGDFNSVPGS 470 (606)
T ss_pred EeccCCCCCCC
Confidence 99999998876
No 13
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]
Probab=99.73 E-value=2e-17 Score=147.26 Aligned_cols=241 Identities=20% Similarity=0.367 Sum_probs=136.8
Q ss_pred CCCCCcEEEEEeCccchhh-hhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhh
Q 017771 37 SKKDPLKFVTWNANSLLLR-VKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRAL 115 (366)
Q Consensus 37 ~~~~~lrI~s~Ni~g~~~~-~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 115 (366)
.....+.+++||+.|+.-. ...|+.++..+|+.++|||||||||-....+. ++.+
T Consensus 95 ~~g~~~S~~~WnidgLdln~l~~RMrAv~H~i~l~sPdiiflQEV~p~~y~~------------------------~~K~ 150 (349)
T KOG2756|consen 95 TQGSMFSLITWNIDGLDLNNLSERMRAVCHYLALYSPDVIFLQEVIPPYYSY------------------------LKKR 150 (349)
T ss_pred hcccEEEEEEeeccccccchHHHHHHHHHHHHHhcCCCEEEEeecCchhhHH------------------------HHHh
Confidence 4456689999999887532 11233689999999999999999998664311 1111
Q ss_pred CCCCCCCceEEEecCCCCcceEEEE--EecCCCcce-eeecccccccCCCCCCCEEEEEeC--CEEEEEEeecCCCCcch
Q 017771 116 SSPPFKNYQIWWSLADSKYAGTALL--VKKCFQPKK-VSFSLEKTALKYEPDGRVILAEFE--TFYLLNTYAPNNGWKEE 190 (366)
Q Consensus 116 ~~~~~~~y~~~~~~~~~~~~Gvail--sr~~i~~~~-~~~~~~~~~~~~~~~~r~i~~~~~--~l~v~nvh~~~~~~~~~ 190 (366)
...|..+.. ....+.+.+++ ++..+...+ +.++-. .+.+.-.++.+... .+++.+.|+.+...+..
T Consensus 151 ----~s~y~i~~~-~~~~~~~~~~l~~s~~~Vks~~~i~F~NS----~M~R~L~I~Ev~v~G~Kl~l~tsHLEStr~h~P 221 (349)
T KOG2756|consen 151 ----SSNYEIITG-HEEGYFTAIMLKKSRVKVKSQEIIPFPNS----KMMRNLLIVEVNVSGNKLCLMTSHLESTRGHAP 221 (349)
T ss_pred ----hhheeEEEe-ccceeeeeeeeehhhcCccccceeccCcc----hhhheeEEEEEeecCceEEEEeccccCCCCCCh
Confidence 033444443 23334454444 444432111 112221 12112223334443 69999999998876542
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCcCcCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhh
Q 017771 191 ENSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAIL 270 (366)
Q Consensus 191 ~~~~~~r~~~~~~l~~~l~~~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 270 (366)
.+.++-..-++.+.+.+...++..||++||+|......... + +
T Consensus 222 -~r~~qF~~~~~k~~EaIe~lPnA~ViFGGD~NlrD~ev~r~------------------------~------------l 264 (349)
T KOG2756|consen 222 -ERMNQFKMVLKKMQEAIESLPNATVIFGGDTNLRDREVTRC------------------------G------------L 264 (349)
T ss_pred -HHHHHHHHHHHHHHHHHHhCCCceEEEcCcccchhhhcccC------------------------C------------C
Confidence 12222223466677777667899999999999754432111 0 1
Q ss_pred ccCCeeeeeecccCCCCCCcceeecCCCCCCCCC---CcceeEEEEeChhhH-hh--heEEEEcC-CccccCCCCCCCCc
Q 017771 271 KEGRLIDAYRFLHKEKDMDCGFSWSGNPIGKYRG---KRMRIDYFIVSEELK-DR--IIACEMQG-HGIELEGFYGSDHC 343 (366)
Q Consensus 271 ~~~~l~D~~~~~~p~~~~~~~~T~~~~~~~~~~~---~~~rID~I~~s~~~~-~~--~~~~~v~~-~~~~~~~~~~SDH~ 343 (366)
-++ .+|+|..+.... +..|||.+..+....+ -..|+|+||.+..-. .. ........ ...-..+.++|||.
T Consensus 265 PD~-~vDvWE~lg~p~--~~~FTwDT~~N~nl~G~~a~k~RfDRi~~r~~~~~G~~~~~~l~l~g~~kiRgc~~fPSDHw 341 (349)
T KOG2756|consen 265 PDN-IVDVWEFLGKPK--HCQFTWDTQMNSNLGGTAACKLRFDRIFFRAAAEEGHIIPRSLDLLGLEKLRGCGRFPSDHW 341 (349)
T ss_pred Cch-HHHHHHHhCCCC--cCceeeecccCcccchhHHHHHHHHHHhhhhhhhcCCcCccccchhhhhhhccCCCCCcccc
Confidence 123 788998887333 2789998754433322 248999999843211 00 01111111 00112347899999
Q ss_pred ceEEEec
Q 017771 344 PVSLELS 350 (366)
Q Consensus 344 Pv~~~l~ 350 (366)
+|.++|.
T Consensus 342 gll~Tl~ 348 (349)
T KOG2756|consen 342 GLLCTLD 348 (349)
T ss_pred eeeeecc
Confidence 9999986
No 14
>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]
Probab=99.72 E-value=1e-16 Score=151.23 Aligned_cols=263 Identities=35% Similarity=0.508 Sum_probs=190.3
Q ss_pred CcEEEEEeCccchhhhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCC
Q 017771 41 PLKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPF 120 (366)
Q Consensus 41 ~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 120 (366)
.+.|+.||+.+.+...+. .-..++.....|++|+||++..-...+. . .+..
T Consensus 63 ~~~i~~~~i~~~~~~~~~---~~~~~~~~~l~d~~~~~~t~~~i~~~~~-------------------------~-~~~~ 113 (335)
T KOG1294|consen 63 VLNICPWDIAGLEACEKF---SGDPEISSELRDLQCLLETKCTIDSGPC-------------------------S-HPTE 113 (335)
T ss_pred EeecCchhhhhhhhhhcc---ccchhccccchhhhhhhhccceeccCcc-------------------------e-eccc
Confidence 468899999888765543 2456777889999999999876332211 0 0112
Q ss_pred CCc-eEEEecC--CCCcceEEEEEecCCCcceeeecccccccCCCCCCCEEEEEeCCEEEEEEeecCCCCcchhhhHHHH
Q 017771 121 KNY-QIWWSLA--DSKYAGTALLVKKCFQPKKVSFSLEKTALKYEPDGRVILAEFETFYLLNTYAPNNGWKEEENSFQRR 197 (366)
Q Consensus 121 ~~y-~~~~~~~--~~~~~Gvailsr~~i~~~~~~~~~~~~~~~~~~~~r~i~~~~~~l~v~nvh~~~~~~~~~~~~~~~r 197 (366)
.+| +.++..+ ..++.|+..+++. .|..+.++.......++..+++|.+++..+.+++.|+|+...+.....+..+
T Consensus 114 ~~~~~~~~~~~~~~~~y~~~~~~~~~--~p~~v~~~~~~~~s~h~~~g~~i~~e~e~~~l~~~y~p~~~~~~~~~~~~~~ 191 (335)
T KOG1294|consen 114 KGYTHSLLSCASKKDGYSGEIDYSKF--KPLKVHYGFGAMGSDHRPVGRVIIAEFEIFILINTYVPNIGGGLVNLVYRIL 191 (335)
T ss_pred CCcccceeecccccCCccceeeeeec--ccceeeecccccCCccCccceEEEEeecceeeccccCcccccccchhhhhhh
Confidence 677 4555544 3358888888887 4555666655212345667899999999999999999999877654445333
Q ss_pred HHHHHHHHHHHHhc-----CCCCEEEEccCCccCCcCcCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHH-Hhhhc
Q 017771 198 RKWDKRIQEFVLQC-----SGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRF-GAILK 271 (366)
Q Consensus 198 ~~~~~~l~~~l~~~-----~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 271 (366)
..|.+.+...+.+. ...++++|||.|..+...+...+ .+.+........++++.++.++ ..+++
T Consensus 192 ~~~~~~~~~~~~~~~~~k~~~~~~v~~gd~nvs~~~i~~~~~----------~~~~~~~~~~~~~~t~e~R~~~~~~~~~ 261 (335)
T KOG1294|consen 192 DRWDKEIEEKRKKQSSSKNLKAPVVICGDLNVSHEEIDPSKP----------LVSPAGNTLSNAGFTPEERDSFFAELLE 261 (335)
T ss_pred hhhHHHHHHHhhhccccccccCcceeccccccchhhcccccc----------ccccccCCcCCCCCCHHHhhhHHHhhcc
Confidence 56666777776553 23479999999999998874221 1222333447889999999999 68888
Q ss_pred cCCeeeeeecccCCCCCCcceeec-CCCCCCCCCCcceeEEEEeChhhHhhheEEEEcCCccccCCCCCCCCcceEEEec
Q 017771 272 EGRLIDAYRFLHKEKDMDCGFSWS-GNPIGKYRGKRMRIDYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELS 350 (366)
Q Consensus 272 ~~~l~D~~~~~~p~~~~~~~~T~~-~~~~~~~~~~~~rID~I~~s~~~~~~~~~~~v~~~~~~~~~~~~SDH~Pv~~~l~ 350 (366)
.+.++|+|+.++++.. ..+|+| ...+.+.++.+.|+||++++..+......+.|...+ ..+|||+|+.+.|.
T Consensus 262 ~~~~iDt~r~~~~~~~--~~~t~Wk~~~~~r~~~~~~r~dy~~Vsk~~~n~~r~~~Ic~r~-----~~gsdh~pi~~~~~ 334 (335)
T KOG1294|consen 262 KGPLIDTYRELHKDQK--KAYTFWKYMPNGRQRGHGERCDYILVSKPGPNNGRRFYICSRP-----IHGSDHCPITLEFF 334 (335)
T ss_pred CCcceeehhhhcCCcc--ccccchhhccccccCCCCCceeEEEecCcCCCCCceeeeecCc-----cCCCCCCCeeeeec
Confidence 8889999999999874 367755 445566678899999999999998889999998742 56799999999986
Q ss_pred c
Q 017771 351 E 351 (366)
Q Consensus 351 ~ 351 (366)
+
T Consensus 335 ~ 335 (335)
T KOG1294|consen 335 L 335 (335)
T ss_pred C
Confidence 4
No 15
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=99.70 E-value=8.1e-17 Score=145.47 Aligned_cols=155 Identities=23% Similarity=0.265 Sum_probs=75.5
Q ss_pred EEEeCccchhhh--hCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCCCCCCC
Q 017771 45 VTWNANSLLLRV--KNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSSPPFKN 122 (366)
Q Consensus 45 ~s~Ni~g~~~~~--~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 122 (366)
+||||++...+. ..+...+.++|..++||||||||+..... ...+...+.. ..+
T Consensus 1 ~T~Nv~~~~~~~~~~~~~~~i~~~i~~~~~Dii~LQEv~~~~~----------------------~~~~~~~~~~--~~~ 56 (249)
T PF03372_consen 1 MTWNVRGWNYRSDNDRKRREIAQWIAELDPDIIALQEVRNDDL----------------------SELLEEQLRG--YLG 56 (249)
T ss_dssp EEEEESTHHHHHHHHHHHHHHHHHHHHHT-SEEEEEEEESHHH----------------------HHHHHHHHHT--CTT
T ss_pred CeEEeCcCcccccchhHHHHHHHHHHhcCCCEEEEecchhhhh----------------------hhhhhhhccc--ccc
Confidence 699998842221 11124599999999999999999995421 0011122221 133
Q ss_pred ceEEEecCCC-----CcceEEEEEecCCCcceeeecccccccCCCCCC-CEE------EE--EeCCEEEEEEeecCCCCc
Q 017771 123 YQIWWSLADS-----KYAGTALLVKKCFQPKKVSFSLEKTALKYEPDG-RVI------LA--EFETFYLLNTYAPNNGWK 188 (366)
Q Consensus 123 y~~~~~~~~~-----~~~Gvailsr~~i~~~~~~~~~~~~~~~~~~~~-r~i------~~--~~~~l~v~nvh~~~~~~~ 188 (366)
+......+.. +..|++|++|.++..... .............. ... .+ ....|.|+++|+++....
T Consensus 57 ~~~~~~~~~~~~~~~~~~g~~i~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~H~~~~~~~ 135 (249)
T PF03372_consen 57 YYGSFWPGNSPPSDAGGYGVAILSRSPIFSSVS-YVFSLFSKPGIRIFRRSSKSKGIVPVSINGKPITVVNVHLPSSNDE 135 (249)
T ss_dssp HEEEEEETSSSTTCSSSEEEEEEESSCCCEEEE-EEEEEESSSTTCEEEEEEEEEEEEEEEEETEEEEEEEEETTSHHHH
T ss_pred cccceeccccccccccCceEEEEEccccccccc-cccccccccccccccccccccccccccccceEEEeeeccccccchh
Confidence 3333322222 246999999998642211 11110000000000 000 01 123688999998884311
Q ss_pred chhhhHHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCc
Q 017771 189 EEENSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEE 228 (366)
Q Consensus 189 ~~~~~~~~r~~~~~~l~~~l~~~~~~p~Il~GDFN~~~~~ 228 (366)
...+..+++..+..........|+|||||||+.+..
T Consensus 136 ----~~~~~~~~~~~~~~~~~~~~~~~~iv~GDfN~~~~~ 171 (249)
T PF03372_consen 136 ----RQEQWRELLARIQKIYADNPNEPVIVMGDFNSRPDS 171 (249)
T ss_dssp ----HHHHHHHHHHHHHHHHHTSSCCEEEEEEE-SS-BSS
T ss_pred ----hhhhhhhhhhhhhhcccccccceEEEEeecccCCcc
Confidence 111112233333332222233479999999998764
No 16
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=99.65 E-value=1.2e-14 Score=134.86 Aligned_cols=158 Identities=15% Similarity=0.110 Sum_probs=86.8
Q ss_pred CCcEEEEEeCccchhhhhCCc----hhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhh
Q 017771 40 DPLKFVTWNANSLLLRVKNNW----PEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRAL 115 (366)
Q Consensus 40 ~~lrI~s~Ni~g~~~~~~~~~----~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 115 (366)
..|||+||||+.+... +..| +.++++|+ ++|||++||+..... . ....++.+|
T Consensus 16 ~~l~I~SfNIr~fgd~-k~~~~~r~~~i~~il~--~~DIiglQEV~d~q~---------~-----------~l~~ll~~L 72 (276)
T smart00476 16 ASLRICAFNIQSFGDS-KMSNATLMSIIVKILS--RYDIALVQEVRDSDL---------S-----------AVPKLMDQL 72 (276)
T ss_pred CcEEEEEEECcccCCc-cccHHHHHHHHHHHhc--cCCEEEEEEeecchh---------H-----------HHHHHHHHH
Confidence 4699999999865532 2222 44666665 899999999987542 1 123345556
Q ss_pred CCCCCCCceEEEecCCC--C-cceEEEEEecCCC-cceeeeccccc----ccCCCCCCCEEEEEe-----CCEEEEEEee
Q 017771 116 SSPPFKNYQIWWSLADS--K-YAGTALLVKKCFQ-PKKVSFSLEKT----ALKYEPDGRVILAEF-----ETFYLLNTYA 182 (366)
Q Consensus 116 ~~~~~~~y~~~~~~~~~--~-~~Gvailsr~~i~-~~~~~~~~~~~----~~~~~~~~r~i~~~~-----~~l~v~nvh~ 182 (366)
+.....+|.++.+.... + ..-.+++.|.... ... ....+.. .....++..+..+.. ..|.++++|.
T Consensus 73 n~~~~~~Y~~v~s~r~gr~~~~E~~a~~Yr~drv~v~~-~~~f~d~~~~~~~~F~ReP~~~~F~~~~~~~~~F~li~~H~ 151 (276)
T smart00476 73 NSDSPNTYSYVSSEPLGRNSYKEQYLFLYRSDLVSVLD-SYLYDDGCECGNDVFSREPFVVKFSSPSTAVKEFVIVPLHT 151 (276)
T ss_pred hhcCCCCceEEecCCCCCCCCCEEEEEEEecceEEEcc-cceecCCCCCccccccccceEEEEEeCCCCCccEEEEEecC
Confidence 54333588888765321 1 2246888877531 111 0111110 011122232333332 2699999999
Q ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCC
Q 017771 183 PNNGWKEEENSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHE 227 (366)
Q Consensus 183 ~~~~~~~~~~~~~~r~~~~~~l~~~l~~~~~~p~Il~GDFN~~~~ 227 (366)
.+.....+ .....+.+.+..++....++||+||||+..+
T Consensus 152 ~p~~~~~e------~~aL~~v~~~~~~~~~~~~villGDFNa~~~ 190 (276)
T smart00476 152 TPEAAVAE------IDALYDVYLDVRQKWGTEDVIFMGDFNAGCS 190 (276)
T ss_pred ChHHHHHH------HHHHHHHHHHHHHhhccCCEEEEccCCCCCC
Confidence 88652111 1111222333333337899999999998543
No 17
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]
Probab=99.50 E-value=1e-12 Score=127.20 Aligned_cols=160 Identities=21% Similarity=0.211 Sum_probs=92.9
Q ss_pred CCcEEEEEeC--ccc-h-----------h--hhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhh
Q 017771 40 DPLKFVTWNA--NSL-L-----------L--RVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKA 103 (366)
Q Consensus 40 ~~lrI~s~Ni--~g~-~-----------~--~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~ 103 (366)
..++|||||| ..+ + . .+.+|+..|+..|...+|||+|||||.....
T Consensus 115 f~ftvmSYNILAQ~l~~~~~r~~~~~s~~~L~W~~R~~~Ll~EL~~~dpDIlCLQEVq~d~~------------------ 176 (495)
T KOG2338|consen 115 FDFTVMSYNILAQDLLRDIRRLYFPESGPALKWLRRSQNLLNELKHYDPDVLCLQEVQEDHY------------------ 176 (495)
T ss_pred cceEEEEehHhHHHHHHHhHHhhccCChhhcchhHHhHHHHHHHhhcCCCeeeehhhhhhhh------------------
Confidence 5899999999 222 0 0 1222446799999999999999999987652
Q ss_pred hHHHHHHHHHhhCCCCCCCceEEEecCC-CCcceEEEEEecCC---Ccc-eeeeccccc-ccCCCCCCCEEEEEe-----
Q 017771 104 SREEKLILMRALSSPPFKNYQIWWSLAD-SKYAGTALLVKKCF---QPK-KVSFSLEKT-ALKYEPDGRVILAEF----- 172 (366)
Q Consensus 104 ~~~~~~~~~~~l~~~~~~~y~~~~~~~~-~~~~Gvailsr~~i---~~~-~~~~~~~~~-~~~~~~~~r~i~~~~----- 172 (366)
.++.+..+ ...||..++.... .+..|++++++... .+- .+.+..... ....+.-+.++.+.+
T Consensus 177 -~~~~~~~~------~~lGy~~~~~r~t~~KthG~ai~w~~~~F~lv~~~~l~y~~~~~~l~n~~NV~lvv~l~f~~~~~ 249 (495)
T KOG2338|consen 177 -PEFWQPLL------GKLGYTGFFKRRTGTKTHGVAILWHSAKFKLVNHSELNYFDSGSALANRDNVGLVVSLEFRLVDE 249 (495)
T ss_pred -HHHHHHHH------hhcCceEEEEeccCCCCceEEEEEecccceecccchhhcccccchhhcccceeEEEEEEecccCc
Confidence 01223322 2279987665444 44669999987742 110 011111100 001111233444444
Q ss_pred --CCEEEEEEeecCCCCcchhhhHHHHHHHHHHHHHHHHh----c-CCCCEEEEccCCccCCcC
Q 017771 173 --ETFYLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQ----C-SGKPLIWCGDLNVSHEEI 229 (366)
Q Consensus 173 --~~l~v~nvh~~~~~~~~~~~~~~~r~~~~~~l~~~l~~----~-~~~p~Il~GDFN~~~~~~ 229 (366)
..|.|+|+|+-....+.. . |+.+...|.+-+++ . ...|+++|||||+.+.+.
T Consensus 250 ~sq~ilVanTHLl~np~~~~-v----rL~Q~~iiL~~~~~~~~~~~~~~pi~l~GDfNt~p~~~ 308 (495)
T KOG2338|consen 250 SSQGILVANTHLLFNPSRSD-V----RLAQVYIILAELEKMSKSSKSHWPIFLCGDFNTEPDSP 308 (495)
T ss_pred ccCceEEEeeeeeecCcccc-h----hhHHHHHHHHHHHHHHhhcccCCCeEEecCCCCCCCCC
Confidence 169999999977754432 1 23333333344433 1 356999999999988754
No 18
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.40 E-value=1.3e-12 Score=120.66 Aligned_cols=147 Identities=16% Similarity=0.087 Sum_probs=85.3
Q ss_pred CCCCcEEEEEeCccchhhhhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHHHHhhCC
Q 017771 38 KKDPLKFVTWNANSLLLRVKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLILMRALSS 117 (366)
Q Consensus 38 ~~~~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 117 (366)
.+..++++++|+..-+... ..+...+...++|+|.+||+....... +.++.
T Consensus 85 ~~~~~~~l~~N~r~~n~~~----~k~Lsl~~~~~~D~v~~~E~~~~~~~~------------------------~~~l~- 135 (309)
T COG3021 85 DQRLLWNLQKNVRFDNASV----AKLLSLIQQLDADAVTTPEGVQLWTAK------------------------VGALA- 135 (309)
T ss_pred cchhhhhhhhhccccCcCH----HHHHHHHhhhCcchhhhHHHHHHhHhH------------------------HHHHH-
Confidence 5667888888975433322 347777777889999999987543200 11221
Q ss_pred CCCCCceEEEecC-CCCcceEEEEEecC-CCcceeeecccccccCCCCCCCEEEEE----eCCEEEEEEeecCCCCcchh
Q 017771 118 PPFKNYQIWWSLA-DSKYAGTALLVKKC-FQPKKVSFSLEKTALKYEPDGRVILAE----FETFYLLNTYAPNNGWKEEE 191 (366)
Q Consensus 118 ~~~~~y~~~~~~~-~~~~~Gvailsr~~-i~~~~~~~~~~~~~~~~~~~~r~i~~~----~~~l~v~nvh~~~~~~~~~~ 191 (366)
..|.++.... ..+..+++++||.+ + +. ....+ ....+.+++++.. ...+.|+++|..+.....+
T Consensus 136 ---~~yP~~~~~~~~~~~~~~a~~sr~~~~-~~--~~~e~---~~~~pk~~~~t~~~~~~g~~l~v~~lh~~~~~~~~~- 205 (309)
T COG3021 136 ---AQYPAFILCQHPTGVFTLAILSRRPCC-PL--TEAEP---WLRLPKSALATAYPLPDGTELTVVALHAVNFPVGTD- 205 (309)
T ss_pred ---HhCCceeecCCCCCeeeeeeccccccc-cc--cccCc---cccCCccceeEEEEcCCCCEEEEEeeccccccCCcc-
Confidence 3555443333 22555788888874 2 11 11111 0111233444332 2469999999986554332
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCc
Q 017771 192 NSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEE 228 (366)
Q Consensus 192 ~~~~~r~~~~~~l~~~l~~~~~~p~Il~GDFN~~~~~ 228 (366)
.+ | .++.+|.+.+. ....|+|++||||+.+.+
T Consensus 206 -~~--~-~ql~~l~~~i~-~~~gpvIlaGDfNa~pWS 237 (309)
T COG3021 206 -PQ--R-AQLLELGDQIA-GHSGPVILAGDFNAPPWS 237 (309)
T ss_pred -HH--H-HHHHHHHHHHH-cCCCCeEEeecCCCcchh
Confidence 22 2 44556666663 456999999999997643
No 19
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=99.30 E-value=1.6e-11 Score=99.73 Aligned_cols=119 Identities=24% Similarity=0.387 Sum_probs=63.6
Q ss_pred EEEEEEeecCCCCcchhhhHHHHHHHHHHHHHHHHhcCCCCEEEEccCCccCCcCcCcChhhhhhhhcCCCCCCCCCCCC
Q 017771 175 FYLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQCSGKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWG 254 (366)
Q Consensus 175 l~v~nvh~~~~~~~~~~~~~~~r~~~~~~l~~~l~~~~~~p~Il~GDFN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (366)
|.|+|||+|+.. + +..+.+.|.+++......++||+||||+.+..++....
T Consensus 1 i~i~~vY~pp~~---~------~~~~~~~l~~~~~~~~~~~~Ii~GDFN~~~~~w~~~~~-------------------- 51 (119)
T PF14529_consen 1 ITIISVYAPPSS---E------REEFFDQLRQLLKNLPPAPIIIGGDFNAHHPNWDSSNT-------------------- 51 (119)
T ss_dssp EEEEEEE--TTS----------CHHHHHHHHHHHHCCTTSSEEEEEE-----GGGT-SCH--------------------
T ss_pred CEEEEEECCCCc---c------HHHHHHHHHHHHHhCCCCCEEEEeECCCCchhhhhccc--------------------
Confidence 689999999988 1 12346677777765544499999999996554432211
Q ss_pred CCCCCHHHHHHHHhhhccCCeeeeeecccCCCCCCcceeecCCCCCCCCCCcceeEEEEeChhhHhhheEEEEcCCcccc
Q 017771 255 QPGFTIAERKRFGAILKEGRLIDAYRFLHKEKDMDCGFSWSGNPIGKYRGKRMRIDYFIVSEELKDRIIACEMQGHGIEL 334 (366)
Q Consensus 255 ~~~~~~~~~~~~~~~l~~~~l~D~~~~~~p~~~~~~~~T~~~~~~~~~~~~~~rID~I~~s~~~~~~~~~~~v~~~~~~~ 334 (366)
.......+..++...+|.+.... . ..+||.+... .++||++|++..+... ....+..
T Consensus 52 ----~~~~~~~l~~~~~~~~l~~~~~~----~---~~~T~~~~~~------~s~iD~~~~s~~~~~~-~~~~~~~----- 108 (119)
T PF14529_consen 52 ----NSRRGEQLLDWLDSHNLVDLNPP----G---RPPTFISNSH------GSRIDLILTSDNLLSW-CVWVISS----- 108 (119)
T ss_dssp ----HHHHHHHHHHHHHHCTEEE---T----T------SEEECCC------EE--EEEEEECCGCCC-EEEEEET-----
T ss_pred ----cchhHHHHHHHhhhceeeeeecC----C---CCCcccCCCC------CceEEEEEECChHHhc-CcEEEeC-----
Confidence 00244567777777778776321 1 3477765322 4899999999987754 2222222
Q ss_pred CCCCCCCCcceE
Q 017771 335 EGFYGSDHCPVS 346 (366)
Q Consensus 335 ~~~~~SDH~Pv~ 346 (366)
....|||+||.
T Consensus 109 -~~~~SDH~~I~ 119 (119)
T PF14529_consen 109 -DDSGSDHCPIT 119 (119)
T ss_dssp -TSSSSSB--EE
T ss_pred -CCCCCCccCCC
Confidence 24679999984
No 20
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=99.05 E-value=9.9e-10 Score=102.62 Aligned_cols=44 Identities=16% Similarity=0.251 Sum_probs=32.0
Q ss_pred CcEEEEEeC--ccc--------h-h--hhhCCchhHHHHHhhcCCcEEEEeeeecCC
Q 017771 41 PLKFVTWNA--NSL--------L-L--RVKNNWPEFSNFITTFDPDVIALQEVRMPA 84 (366)
Q Consensus 41 ~lrI~s~Ni--~g~--------~-~--~~~~~~~~l~~~i~~~~~DIv~LQEv~~~~ 84 (366)
.++|||||+ +.. . . .+..|.+.|.+.|..+++||+|||||....
T Consensus 30 ~ftimTYN~Laq~y~~r~~y~~s~~aL~W~~R~~~L~~EL~~Yn~Di~CLQEvd~~~ 86 (378)
T COG5239 30 DFTIMTYNVLAQTYATRKMYPYSGWALKWSYRSRLLLQELLYYNADILCLQEVDAED 86 (378)
T ss_pred eeEEEehhhhhhhhccccccCCchhhhhhHHHHHHHHHHHhccCCceeeeehhhhhH
Confidence 799999999 111 0 1 111233668899999999999999998664
No 21
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=98.96 E-value=4.3e-08 Score=93.26 Aligned_cols=165 Identities=18% Similarity=0.191 Sum_probs=83.9
Q ss_pred CcEEEEEeCccchhhhhCCchhHHHHHhh-------cCCcE--EEEeeee-cCCCCCCCCCccccccchhhhhhHHHHHH
Q 017771 41 PLKFVTWNANSLLLRVKNNWPEFSNFITT-------FDPDV--IALQEVR-MPAAGSKDAPKNHQELKDDTKASREEKLI 110 (366)
Q Consensus 41 ~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~-------~~~DI--v~LQEv~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 110 (366)
.+-++||||++...... ..+..||.. ..||| |+|||+. ........ ........-...
T Consensus 4 ~v~v~TwNv~~~~~~p~---~~l~~~l~~~~~~~~~~~pDI~viglQEi~~~~~~~~~~---------~~~~~~~~W~~~ 71 (310)
T smart00128 4 KVLVGTWNVGGLKADPK---VDVTSWLFQKIDVKQSEKPDIYVIGLQEVVDLENGVLLE---------TIAGKERLWSKL 71 (310)
T ss_pred EEEEEEEECCCccCCCh---hhHHHhhccccccccCCCCCEEEEEeeeecccchhhhhh---------ccchhHHHHHHH
Confidence 46789999988641111 356677764 67999 7799983 22211100 000000001122
Q ss_pred HHHhhCCCCCCCceEEEecCCCCcceEEEEEecCCCcc-------eeeecccccccCCCCCCCEEEEEeC--CEEEEEEe
Q 017771 111 LMRALSSPPFKNYQIWWSLADSKYAGTALLVKKCFQPK-------KVSFSLEKTALKYEPDGRVILAEFE--TFYLLNTY 181 (366)
Q Consensus 111 ~~~~l~~~~~~~y~~~~~~~~~~~~Gvailsr~~i~~~-------~~~~~~~~~~~~~~~~~r~i~~~~~--~l~v~nvh 181 (366)
+...|.. ...|....+. .-+.-++.|++|..+.+. .+..++.+ ......+..+.+.+. .+.++++|
T Consensus 72 i~~~l~~--~~~Y~~v~~~-~l~gi~l~vf~~~~~~~~i~~v~~~~v~~G~~~--~~~nKG~v~i~~~~~~~~~~fv~~H 146 (310)
T smart00128 72 IESSLNG--DGQYNVLAKV-RLVGILVLVFVKANHLVYIKDVETFTVKTGMGG--LWGNKGAVAVRFKLSDTSFCFVNSH 146 (310)
T ss_pred HHHhcCC--CCceEEEeee-eecceEEEEEEehhhcCccceeEeeeeeccccc--eeecCceEEEEEEEcCcEEEEEeec
Confidence 2233311 1345544432 222335678888765311 11222221 111223455566655 49999999
Q ss_pred ecCCCCcchhhhHHHHHHHHHHHHHHHHh--------cCCCCEEEEccCCccCC
Q 017771 182 APNNGWKEEENSFQRRRKWDKRIQEFVLQ--------CSGKPLIWCGDLNVSHE 227 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~r~~~~~~l~~~l~~--------~~~~p~Il~GDFN~~~~ 227 (366)
++++... ..+|.+....+...+.- .....+|++||||-.-.
T Consensus 147 L~a~~~~-----~~~R~~~~~~I~~~~~f~~~~~~~~~~~d~~f~~GDlNyRi~ 195 (310)
T smart00128 147 LAAGASN-----VEQRNQDYKTILRALSFPERAELSQFDHDVVFWFGDLNFRLD 195 (310)
T ss_pred cccccch-----hhhhHHHHHHHHHhcCCCCCccccccccceEEEecCcceeec
Confidence 9997743 23344334444433321 13578999999997544
No 22
>COG2374 Predicted extracellular nuclease [General function prediction only]
Probab=98.67 E-value=9.4e-07 Score=89.93 Aligned_cols=259 Identities=18% Similarity=0.187 Sum_probs=135.2
Q ss_pred cCCCCCcEEEEEeCcc-ch----------hh-----------hhCCchhHHHHHhhcCCcEEEEeeeecCCCCCCCCCcc
Q 017771 36 NSKKDPLKFVTWNANS-LL----------LR-----------VKNNWPEFSNFITTFDPDVIALQEVRMPAAGSKDAPKN 93 (366)
Q Consensus 36 ~~~~~~lrI~s~Ni~g-~~----------~~-----------~~~~~~~l~~~i~~~~~DIv~LQEv~~~~~~~~~~~~~ 93 (366)
+.....|||.++||.+ +. .. ..+....+...|..+++||++|-|+.....-....
T Consensus 458 ~~v~G~LkiasfNVlNyf~~~~~~g~~~~~~~d~rga~~~~e~~~Q~~k~v~ai~~ldaDV~GL~Eien~~~~~~s~--- 534 (798)
T COG2374 458 PDVGGSLKIASFNVLNYFNKLSGDGGGASTFSDCRGANTTEEFARQRAKIVTAILTLDADVLGLMEIENNGYGTDSG--- 534 (798)
T ss_pred cccCceeeeeeeehhhhhccCCCCCCCccccccccCccchhHHHHHHHHHHHHHhhcchhhheeeeeeccCCCCCcH---
Confidence 5577889999999932 21 00 00112558888999999999999998764211000
Q ss_pred ccccchhhhhhHHHHHHHHHhhCCCCC-C-CceEEEecCCCC----cceEEEEEecCCC-cceeeecccc-ccc----CC
Q 017771 94 HQELKDDTKASREEKLILMRALSSPPF-K-NYQIWWSLADSK----YAGTALLVKKCFQ-PKKVSFSLEK-TAL----KY 161 (366)
Q Consensus 94 ~~~l~~~~~~~~~~~~~~~~~l~~~~~-~-~y~~~~~~~~~~----~~Gvailsr~~i~-~~~~~~~~~~-~~~----~~ 161 (366)
.++ ..++.+|....+ . .|.++......+ .-+++++.|.... +......... ... ..
T Consensus 535 -~ai-----------~~lV~~lna~~G~~~~y~~v~p~~~~~lgtD~I~vg~iY~~~~V~~~g~~~~~~~~a~~~v~~~~ 602 (798)
T COG2374 535 -DAI-----------AQLVNALNAKAGAGTRYAFVAPGRNGGLGTDAIRVGFIYKPSAVSLVGKAAIVDNDAFLGVGEID 602 (798)
T ss_pred -HHH-----------HHHHHHHHhhcCCCceEEEEecCccCCcCCCceeEEEEeccceEEeccccccccccccccccccc
Confidence 011 122344432222 3 455444322211 3357777765321 1000000000 000 00
Q ss_pred CCCCCE------EEE-EeCCEEEEEEeecCCCCcch---------hhhHHHHHHHHHHHHHHHHh----cCCCCEEEEcc
Q 017771 162 EPDGRV------ILA-EFETFYLLNTYAPNNGWKEE---------ENSFQRRRKWDKRIQEFVLQ----CSGKPLIWCGD 221 (366)
Q Consensus 162 ~~~~r~------i~~-~~~~l~v~nvh~~~~~~~~~---------~~~~~~r~~~~~~l~~~l~~----~~~~p~Il~GD 221 (366)
+...|- ..+ ..+.|+++.-|+.+.++... ..--..|......|..|+.. ..+.+++|+||
T Consensus 603 ~~n~R~~laqtF~~~~~~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~AqaL~~~la~~~~~~~d~~~viLGD 682 (798)
T COG2374 603 DNNARPPLAQTFQDLSGGEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRAAQALAAFLATNPTGKADADIVILGD 682 (798)
T ss_pred ccccCcchhhhhhhccCCcEEEEEEeeecccCCCCCCcccccccccchhhHHHHHHHHHHHHHhhCcccccCCCEEEEec
Confidence 001111 001 11258888889877654311 01112355667788888874 25789999999
Q ss_pred CCccCCcCcCcChhhhhhhhcCCCCCCCCCCCCCCCCCHHHHHHHHhhhccCCeeeeeecccCCCCCCcceeecCCCCCC
Q 017771 222 LNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDWGQPGFTIAERKRFGAILKEGRLIDAYRFLHKEKDMDCGFSWSGNPIGK 301 (366)
Q Consensus 222 FN~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~D~~~~~~p~~~~~~~~T~~~~~~~~ 301 (366)
||+...+. | ++. +.+.++......+++.. ..|||.
T Consensus 683 ~N~y~~ed----p-------------------------------I~~-l~~aGy~~l~~~~~~~~---~~YSY~------ 717 (798)
T COG2374 683 FNDYAFED----P-------------------------------IQA-LEGAGYMNLAARFHDAG---DRYSYV------ 717 (798)
T ss_pred cchhhhcc----H-------------------------------HHH-HhhcCchhhhhhccCCC---CceEEE------
Confidence 99865431 1 122 22222333333344332 457764
Q ss_pred CCCCcceeEEEEeChhhHhhheEEEEcC-Cccc--------------------cCCCCCCCCcceEEEeccCCC
Q 017771 302 YRGKRMRIDYFIVSEELKDRIIACEMQG-HGIE--------------------LEGFYGSDHCPVSLELSEASS 354 (366)
Q Consensus 302 ~~~~~~rID~I~~s~~~~~~~~~~~v~~-~~~~--------------------~~~~~~SDH~Pv~~~l~~~~~ 354 (366)
+.+.-..+||+|+|.++..++..+.... .+.+ -.....|||-||.+.|.+...
T Consensus 718 f~G~~gtLDhaLas~sl~~~v~~a~ewHINAdE~~~ldYn~~Fk~q~~~~~~~~~~fR~SDHDPvvvglnL~~~ 791 (798)
T COG2374 718 FNGQSGTLDHALASASLAAQVSGATEWHINADEPDALDYNLEFKGQNVSLYKTTNPFRASDHDPVVVGLNLLGT 791 (798)
T ss_pred ECCccchHhhhhhhhhhhhhccCceeeeecccccchhhhhhhhccccccccccCCccccCCCCCeEEEEEeccc
Confidence 1222368999999999887765554432 1110 123567999999999998643
No 23
>KOG0620 consensus Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins [Transcription]
Probab=98.56 E-value=1.9e-07 Score=90.02 Aligned_cols=40 Identities=23% Similarity=0.311 Sum_probs=27.9
Q ss_pred CcEEEEEeCccch----------h----hhhCCchhHHHHHhhcCCcEEEEeee
Q 017771 41 PLKFVTWNANSLL----------L----RVKNNWPEFSNFITTFDPDVIALQEV 80 (366)
Q Consensus 41 ~lrI~s~Ni~g~~----------~----~~~~~~~~l~~~i~~~~~DIv~LQEv 80 (366)
.++|+|||+-... . .+..+...+.+.|...+||++|||||
T Consensus 19 ~~~v~s~n~l~~~~~~~~~~~~~~~~~~~w~~r~~~~~~ei~~~~ad~icLqev 72 (361)
T KOG0620|consen 19 TFTVLSYNILSQLYATSKLYMYCPSWALSWEYRRQLLLEEILNYNADILCLQEV 72 (361)
T ss_pred eEEeechhhhhhhhcccCCCcccchhhccHHHHHHHHHHHHhCCCcceeecchh
Confidence 8999999992211 0 01112245777788889999999999
No 24
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.83 E-value=0.00017 Score=75.17 Aligned_cols=164 Identities=20% Similarity=0.236 Sum_probs=77.1
Q ss_pred CcEEEEEeCccchhhhhCCchhHHHHHhhc-------CCcE--EEEeeeecCCCCCCCCCccccccchhhhhhHHHHHHH
Q 017771 41 PLKFVTWNANSLLLRVKNNWPEFSNFITTF-------DPDV--IALQEVRMPAAGSKDAPKNHQELKDDTKASREEKLIL 111 (366)
Q Consensus 41 ~lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~-------~~DI--v~LQEv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 111 (366)
.+-+.||||||.....+ ..|.+||-.. -+|| |+|||+-.-....-..+. ..+..+=|. .+
T Consensus 538 ~IfvgTfNvNG~s~~~k---~~L~~WLfp~s~~~~~~~aDIyviG~eEvVeLnag~iv~As-------~tk~~~Wee-~i 606 (1080)
T KOG0566|consen 538 SIFVGTFNVNGRSAAFK---DDLSDWLFPISRGKEFSPADIYVIGFEEVVELNAGNIVSAS-------TTKRRFWEE-KI 606 (1080)
T ss_pred EEEEEeeeccCccccch---hhHHhhccccccCCcCCcCcEEEEeehhhhhcCccceeccC-------hHHHHHHHH-HH
Confidence 34566899999433222 4577776543 3675 678997433221110000 001111111 12
Q ss_pred HHhhCCCCCCCceEEEecCCCCcceEEEE--EecCCCcc----e---eeecccccccCCCCCCCEEEEEeC--CEEEEEE
Q 017771 112 MRALSSPPFKNYQIWWSLADSKYAGTALL--VKKCFQPK----K---VSFSLEKTALKYEPDGRVILAEFE--TFYLLNT 180 (366)
Q Consensus 112 ~~~l~~~~~~~y~~~~~~~~~~~~Gvail--sr~~i~~~----~---~~~~~~~~~~~~~~~~r~i~~~~~--~l~v~nv 180 (366)
.+.|++. ...|-...+ ....||+++ .|..-.|. + ...|+++.. -......|...+. .+++++.
T Consensus 607 ~~~Ln~~-~~kYvlL~s---~QlvGv~L~iF~r~~~~p~Ik~V~~~tkKTGfGG~t--gNKGAVAIrf~~~~TsfCFv~S 680 (1080)
T KOG0566|consen 607 LKTLNRY-KNKYVLLRS---EQLVGVCLLLFIRPDHAPYIKDVAGDTKKTGFGGAT--GNKGAVAIRFVYHATSFCFVCS 680 (1080)
T ss_pred HHHhcCC-CCceEEEeh---hhhheeeEEEEEcccccchhhhcccceeeccccccc--CCCceEEEEEEeccccEEEEec
Confidence 3344432 244544443 245677644 55532111 1 123333210 0011223445543 7999999
Q ss_pred eecCCCCcchhhhHHHHHHHHHHHHHHHHh------cCCCCEEEEccCCccC
Q 017771 181 YAPNNGWKEEENSFQRRRKWDKRIQEFVLQ------CSGKPLIWCGDLNVSH 226 (366)
Q Consensus 181 h~~~~~~~~~~~~~~~r~~~~~~l~~~l~~------~~~~p~Il~GDFN~~~ 226 (366)
|+.++....+ +|..=.+.+..-|.= .....++.|||||-.-
T Consensus 681 HlAAG~snv~-----ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYRI 727 (1080)
T KOG0566|consen 681 HLAAGQSNVE-----ERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYRI 727 (1080)
T ss_pred ccccccchHh-----hhhhhHHHHHHhccccCCccccCCceEEEecccceee
Confidence 9999886432 121111222222221 1346799999999643
No 25
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=95.83 E-value=0.038 Score=53.85 Aligned_cols=48 Identities=19% Similarity=0.134 Sum_probs=28.8
Q ss_pred EEEEeChhhHhhheEEEEcCCccccCCCCCCCCcceEEEeccCCCchhHHhhhcC
Q 017771 310 DYFIVSEELKDRIIACEMQGHGIELEGFYGSDHCPVSLELSEASSDSEKREKKNL 364 (366)
Q Consensus 310 D~I~~s~~~~~~~~~~~v~~~~~~~~~~~~SDH~Pv~~~l~~~~~~~~~~~~~~~ 364 (366)
|+|++.++-.. .....-.+ ....|||.||+++|...-.--.+.+|.++
T Consensus 292 DRIl~~s~~~~-p~sY~sip------~l~~SDHrPV~a~~~~~i~~~d~~~k~~~ 339 (460)
T COG5411 292 DRILYKSEQLT-PHSYSSIP------HLMISDHRPVYATFRAKIKVVDPSKKEGL 339 (460)
T ss_pred hhhhhhccccc-cccccccC------ceeecCCCeEEEEEecceEEeCcchhhhh
Confidence 99998876321 11111111 13679999999999977554444444443
No 26
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=94.89 E-value=0.26 Score=50.46 Aligned_cols=36 Identities=33% Similarity=0.590 Sum_probs=24.2
Q ss_pred cEEEEEeCccchhhhhCCchhHHHHHhhcCC-c--EEEEeee
Q 017771 42 LKFVTWNANSLLLRVKNNWPEFSNFITTFDP-D--VIALQEV 80 (366)
Q Consensus 42 lrI~s~Ni~g~~~~~~~~~~~l~~~i~~~~~-D--Iv~LQEv 80 (366)
+-|+||||+|-..... -.+.+||...+| | ||+|||+
T Consensus 110 v~v~TWNV~g~~p~~~---l~l~~wl~~~~p~DiyviG~QE~ 148 (621)
T PLN03191 110 VTIGTWNVAGRLPSED---LEIEDWLSTEEPADIYIIGFQEV 148 (621)
T ss_pred EEEEEeecCCCCCccc---CCHHHhccCCCCCCEEEEeeEEe
Confidence 4678899988654322 247778875554 6 4678997
No 27
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=88.18 E-value=2.1 Score=40.08 Aligned_cols=54 Identities=19% Similarity=0.168 Sum_probs=31.5
Q ss_pred CEEEEEEeecCCCCcchhh-----hH-HHHHHHHHHHHHHHHh--cCCCCEEEEccCCccCC
Q 017771 174 TFYLLNTYAPNNGWKEEEN-----SF-QRRRKWDKRIQEFVLQ--CSGKPLIWCGDLNVSHE 227 (366)
Q Consensus 174 ~l~v~nvh~~~~~~~~~~~-----~~-~~r~~~~~~l~~~l~~--~~~~p~Il~GDFN~~~~ 227 (366)
.|.++|+|+-+..++.+.. .+ ..|..-+..+...+.. ....++++.||||-...
T Consensus 81 ~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~~~~~~~~~lF~fGDfNyRld 142 (356)
T PTZ00312 81 VVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECSAFISPSDPLFIFGDFNVRLD 142 (356)
T ss_pred EEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHhhccCCCCcEEEeccceeeec
Confidence 5899999998877543311 01 1222222222222322 26789999999997544
No 28
>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]
Probab=69.34 E-value=16 Score=35.13 Aligned_cols=54 Identities=26% Similarity=0.471 Sum_probs=37.7
Q ss_pred CCCCCCEEEEEeCCEEEEEEeecCCCCcchhhhHHHHHHHHHHHHHHHHh--cCCCCEEE
Q 017771 161 YEPDGRVILAEFETFYLLNTYAPNNGWKEEENSFQRRRKWDKRIQEFVLQ--CSGKPLIW 218 (366)
Q Consensus 161 ~~~~~r~i~~~~~~l~v~nvh~~~~~~~~~~~~~~~r~~~~~~l~~~l~~--~~~~p~Il 218 (366)
.+++++++..+.+.+.+++||.+........ .+..|...+...++. ..+.++++
T Consensus 9 ~~~~~~~~~~~k~~~~~~~v~~~~~~~e~~~----~~~~~~~~l~~r~~~~~~~g~~~~~ 64 (335)
T KOG1294|consen 9 LDSEGRCVIVDKEMFVLINVYCPRNSPEISK----RRLRFAKVLHYRVEKLLKQGNRKVL 64 (335)
T ss_pred hhccCCeeeeecccccccceeccccCCcchh----hhhhhhhHHHHHHHHHHHhCCeeEe
Confidence 4567888888888899999999998865431 145555566555544 36677777
No 29
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=67.81 E-value=5.2 Score=41.24 Aligned_cols=17 Identities=35% Similarity=0.229 Sum_probs=14.2
Q ss_pred CCCCCCcceEEEeccCC
Q 017771 337 FYGSDHCPVSLELSEAS 353 (366)
Q Consensus 337 ~~~SDH~Pv~~~l~~~~ 353 (366)
...|||.||.+.|.+..
T Consensus 577 i~~SDHRPV~A~F~v~V 593 (621)
T PLN03191 577 IRLSDHRPVSSMFLVEV 593 (621)
T ss_pred cccCCchhcceEEEEEE
Confidence 46799999999988764
No 30
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]
Probab=30.58 E-value=86 Score=29.71 Aligned_cols=57 Identities=11% Similarity=0.102 Sum_probs=32.8
Q ss_pred CCEEEEEEeecCCCCcch-----hhhHHH-HHHHHHHHHHHHHhc--CCCCEEEEccCCccCCcC
Q 017771 173 ETFYLLNTYAPNNGWKEE-----ENSFQR-RRKWDKRIQEFVLQC--SGKPLIWCGDLNVSHEEI 229 (366)
Q Consensus 173 ~~l~v~nvh~~~~~~~~~-----~~~~~~-r~~~~~~l~~~l~~~--~~~p~Il~GDFN~~~~~~ 229 (366)
..+.++|+|+-+.-+.-. ...++. |.+.++.+...+.+. ...-+++.||||....+.
T Consensus 169 k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~~~~~~~fVfGdfNfrLds~ 233 (391)
T KOG1976|consen 169 KEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEGLRNDAIFVFGDFNFRLDST 233 (391)
T ss_pred ceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhccCceEEEEecccccccchH
Confidence 469999999854332110 112222 344455555555442 455677889999866554
Done!