Query 017772
Match_columns 366
No_of_seqs 162 out of 1497
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 03:17:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017772.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017772hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01676 GLDHase galactonolac 100.0 4.5E-67 9.8E-72 519.1 35.1 354 1-360 184-540 (541)
2 PLN02465 L-galactono-1,4-lacto 100.0 1.9E-64 4.2E-69 504.1 31.8 351 1-362 219-572 (573)
3 TIGR01679 bact_FAD_ox FAD-link 100.0 2.3E-56 5.1E-61 439.3 30.5 288 1-361 131-419 (419)
4 TIGR01678 FAD_lactone_ox sugar 100.0 8.7E-57 1.9E-61 442.9 27.3 291 1-354 137-438 (438)
5 TIGR01677 pln_FAD_oxido plant- 100.0 1.7E-52 3.6E-57 420.6 26.7 314 1-362 161-511 (557)
6 PF04030 ALO: D-arabinono-1,4- 100.0 9.5E-47 2.1E-51 349.8 8.3 257 38-359 1-259 (259)
7 KOG4730 D-arabinono-1, 4-lacto 100.0 3.3E-42 7.3E-47 324.0 25.4 335 2-365 174-517 (518)
8 PLN00107 FAD-dependent oxidore 100.0 2E-37 4.3E-42 276.9 13.9 153 190-362 44-205 (257)
9 PLN02441 cytokinin dehydrogena 99.8 8.2E-19 1.8E-23 175.2 26.3 90 1-90 197-294 (525)
10 PF09129 Chol_subst-bind: Chol 99.5 6.1E-12 1.3E-16 113.0 19.0 262 54-361 9-321 (321)
11 COG0277 GlcD FAD/FMN-containin 99.3 1.9E-11 4.1E-16 122.4 12.0 119 210-358 336-457 (459)
12 KOG1231 Proteins containing th 99.3 1.4E-10 3E-15 110.8 15.1 48 1-48 194-241 (505)
13 PRK11282 glcE glycolate oxidas 98.8 1.7E-08 3.7E-13 97.1 8.1 69 1-69 120-194 (352)
14 KOG1262 FAD-binding protein DI 98.7 1.2E-06 2.7E-11 82.7 16.6 95 1-96 183-287 (543)
15 PRK11230 glycolate oxidase sub 98.4 1E-06 2.2E-11 89.1 8.9 69 1-69 182-256 (499)
16 PLN02805 D-lactate dehydrogena 98.3 2.1E-06 4.6E-11 87.6 8.9 69 1-69 258-333 (555)
17 TIGR00387 glcD glycolate oxida 98.1 1E-05 2.2E-10 80.2 8.5 69 1-69 124-199 (413)
18 PRK13905 murB UDP-N-acetylenol 96.9 0.00075 1.6E-08 63.9 3.6 42 1-45 149-192 (298)
19 KOG1233 Alkyl-dihydroxyacetone 95.1 0.022 4.8E-07 54.4 3.9 68 1-68 291-364 (613)
20 PF09265 Cytokin-bind: Cytokin 94.9 0.049 1.1E-06 50.7 5.4 124 211-353 145-276 (281)
21 PF08031 BBE: Berberine and be 94.7 0.02 4.4E-07 38.3 1.9 26 329-354 16-43 (47)
22 PF02913 FAD-oxidase_C: FAD li 94.1 0.15 3.3E-06 46.0 7.0 106 211-352 132-244 (248)
23 KOG1232 Proteins containing th 92.8 0.21 4.6E-06 47.9 5.5 63 1-63 216-285 (511)
24 TIGR00387 glcD glycolate oxida 90.7 0.91 2E-05 45.0 7.8 110 211-352 298-410 (413)
25 PRK11230 glycolate oxidase sub 90.7 2 4.3E-05 43.8 10.3 108 211-354 355-469 (499)
26 PLN02805 D-lactate dehydrogena 89.8 2.8 6.1E-05 43.2 10.6 108 211-352 432-544 (555)
27 PRK14652 UDP-N-acetylenolpyruv 89.0 0.83 1.8E-05 43.3 5.7 41 1-45 154-195 (302)
28 PRK13903 murB UDP-N-acetylenol 86.5 0.73 1.6E-05 44.8 3.7 43 1-46 151-197 (363)
29 PRK12436 UDP-N-acetylenolpyruv 85.9 1.8 3.9E-05 41.1 6.0 41 2-45 155-197 (305)
30 PRK11183 D-lactate dehydrogena 83.8 3.9 8.4E-05 41.8 7.5 50 20-70 239-292 (564)
31 PF03392 OS-D: Insect pheromon 65.9 4 8.7E-05 31.7 1.7 29 325-354 66-94 (95)
32 PRK13906 murB UDP-N-acetylenol 55.4 11 0.00025 35.7 3.2 41 1-44 154-196 (307)
33 TIGR00179 murB UDP-N-acetyleno 52.0 32 0.0007 32.2 5.6 44 1-47 131-177 (284)
34 COG0812 MurB UDP-N-acetylmuram 43.2 30 0.00064 32.6 3.8 42 1-45 140-183 (291)
35 PRK14649 UDP-N-acetylenolpyruv 40.3 23 0.0005 33.4 2.7 42 1-45 141-192 (295)
36 cd06397 PB1_UP1 Uncharacterize 37.4 56 0.0012 24.4 3.6 36 2-39 43-78 (82)
37 PF08077 Cm_res_leader: Chlora 32.3 46 0.001 16.6 1.7 12 29-40 5-16 (17)
38 PRK14653 UDP-N-acetylenolpyruv 30.1 60 0.0013 30.7 3.7 40 2-45 151-193 (297)
39 PF11094 UL11: Membrane-associ 23.0 61 0.0013 20.7 1.5 16 2-17 17-32 (39)
40 PRK00046 murB UDP-N-acetylenol 22.0 90 0.002 30.1 3.3 42 1-45 141-188 (334)
41 PRK14651 UDP-N-acetylenolpyruv 21.9 1.9E+02 0.0041 27.0 5.2 40 2-45 130-170 (273)
No 1
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=100.00 E-value=4.5e-67 Score=519.14 Aligned_cols=354 Identities=82% Similarity=1.307 Sum_probs=289.6
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEEEEeccHHHHHHHHHHHHhcCCcEEEEEec
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGLGGLGVVAEVTLQCVERQELVEHTTVSNIKEIKKNHKKLLSENKHVKYLHIP 80 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p 80 (366)
++||+|+|++++||+++|||||||++||+|+|||||+|||||+|++.+.......+++++++.+++++++++|++++|||
T Consensus 184 l~lVta~G~vv~~s~~~~pdLF~AargslG~LGVItevTLr~~Pa~~l~~~~~~~~~~e~l~~~~~~~~~~~h~~f~wfP 263 (541)
T TIGR01676 184 MKLVTPAKGTIEISKDKDPELFFLARCGLGGLGVVAEVTLQCVERQELVEHTFISNMKDIKKNHKKFLADNKHVKYLHIP 263 (541)
T ss_pred EEEEECCCCEEEECCCCCHHHHHHHhcCCCceEeEEEEEEEEEeccceeEEEEecCHHHHHHHHHHHHhcCCcEEEEEEc
Confidence 58999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHhhhhccccCCCC--CCCCcccchhhhHHHhhhhhc
Q 017772 81 YTDTVVVVTCNPVSKWKGPLKFKPKYTKDEALQHLRDLYRESLKKYRADVMTAKSPD--GTEPDINELSFTELRDKLLAL 158 (366)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~~~~ 158 (366)
+++.+++++.|+++.+..+++..++|..+..++.+.+++...++++.+. ..+ ...+.++...+..++..+..+
T Consensus 264 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~l~~~~~~~ 338 (541)
T TIGR01676 264 YTDAIVVVTCNPISKSRGPPKFKPKYTSEEAIQHVRDLYRESLKKYRGQ-----VADSASEEPDIDEFSFTELRDKLLAL 338 (541)
T ss_pred CCCceeEEEcCCCCcccCCCCccccccchhhhhhhhhhhhhhhhhhhcc-----cccccccccchhhhHHHHHHHHHhhC
Confidence 9999999999998754433333344555555554445554444433100 001 123445566777888887777
Q ss_pred CCccchhhhhhhhhhhhhhccCCCeeeecCccccccccCCCcccccccccCCccccccccHHHHHHHHHHHHHhCCCCCC
Q 017772 159 DPLNKEHVIKVNQAEAEFWRKSEGYRVGWADEILGFDCGGQQWVSETCFPSGTLAKLSMKDLEYIEELKQLIEKEDIPAP 238 (366)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~e~~f~~~e~~vP~~~~~~~l~~i~~~i~~~~~~~~ 238 (366)
.++.|.+++++|++...+|..+.+.++++|+++|+++|++.|+++||++|.....-|-.++.++|++|+++|++++.+++
T Consensus 339 ~~l~~~~~~~in~~~~~~~~~s~~~~v~~S~~vf~~~~~f~q~~~EyaiP~e~~~~~~~~~~~~l~el~~~i~~~~~~~~ 418 (541)
T TIGR01676 339 DPLNKEHVIEINKAEAEFWRKSEGYKVGWSDEILGFDCGGHQWVSETCFPAGTLAKPNMKDIEYIEELKQLIEKENIPAP 418 (541)
T ss_pred CcccchhHHHHHHHHHHHhhcCCceEeCcHHHhcCcccccceEEEEEEEecccccccccchHHHHHHHHHHHHhcCCCCC
Confidence 77777888899886655776677789999999999999999988764333222222222779999999999999999999
Q ss_pred CceEEEeecCCCCCccCCCCCCCCCceeEEEEEEeecCCchhhhhhhhHHHHhhHHHHHHHHHhhc-CCccccccccCCC
Q 017772 239 APIEQRWTARSQSVMSPAYSSVQDDIFSWVGIIMYLPTMDARQRKEITDEFFNYRHLSQKQLWDQY-SAYEHWAKIEVPK 317 (366)
Q Consensus 239 ~~i~vRf~~~d~~~LSp~~~~~~d~~~~~i~v~~y~p~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-gGRpHWgK~~~~~ 317 (366)
||||+||+++|++||||+|++++|+++|||+|+||.|..+..+|++++++|+.|++.. +.++.++ ||||||||.|.+.
T Consensus 419 fPiEvR~ta~Dd~~LSpa~~r~~~~~s~~I~v~~y~~~~~~~~~~~~~~~~f~~~~~~-e~i~~~~ygGRPHWgK~h~~~ 497 (541)
T TIGR01676 419 APIEQRWTACSKSPMSPASSSADDDIFSWVGIIMYLPTMDARQRKEITEEFFHYRHLT-QALLWDHFSAFEHWAKIEVPK 497 (541)
T ss_pred CCeEEEeecCCCcccCCccCCCCCCceEEEEEEecCCCCChhhhhhhHHHHHhhhHHH-HHHHHHhcCCccCcceecCCC
Confidence 9999999999999999999999877789999999998767667788888999765655 4666665 9999999999994
Q ss_pred chHHHHHHHHHHHhcCChhHHHHHHHhcCCCCCCCcchHHhhc
Q 017772 318 DKEELAALQARLRKRFPVDSYNKARKELDPNRILSNNMLEKLF 360 (366)
Q Consensus 318 ~~~~~~~~~~~~~~~YP~~~F~~~r~~lDP~g~F~N~~~~rll 360 (366)
+.+++..+...++++|||++|+++|+++||+|+|+|+|++++|
T Consensus 498 ~~~~l~~~yprl~~~YP~d~F~~~R~~lDP~g~F~N~yL~~lf 540 (541)
T TIGR01676 498 DKDELAALQARLKKKFPVDASNKARKALDPNKILSNNKLEKLF 540 (541)
T ss_pred CHHHHHHHHHHHHhhCCHHHHHHHHHHhCCCCccccHHHHHhh
Confidence 4667777777788888889999999999999999999999997
No 2
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=100.00 E-value=1.9e-64 Score=504.14 Aligned_cols=351 Identities=77% Similarity=1.236 Sum_probs=291.5
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEEEEeccHHHHHHHHHHHHhcCCcEEEEEec
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGLGGLGVVAEVTLQCVERQELVEHTTVSNIKEIKKNHKKLLSENKHVKYLHIP 80 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p 80 (366)
++||+++|++++||++++||||+|+++|+|.|||||+|||||+|.+.+.......+++++++.+++++++++|++++|||
T Consensus 219 l~lVta~G~vv~~s~~~~pdLF~aar~glG~lGVIteVTLql~P~~~L~~~~~~~~~~~~~~~~~~~~~~~~h~~f~wfP 298 (573)
T PLN02465 219 MKLVTPAKGTIELSKEDDPELFRLARCGLGGLGVVAEVTLQCVPAHRLVEHTFVSNRKEIKKNHKKWLSENKHIRYMWIP 298 (573)
T ss_pred EEEEECCCCEEEECCCCCHHHHhHhhccCCCCcEEEEEEEEEEecCceEEEEEEecHHHHHHHHHHHHHhCcccceeecC
Confidence 58999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHhhhhccccCCCCCCCCcccchhhhHHHhhhhhcCC
Q 017772 81 YTDTVVVVTCNPVSKWKGPLKFKPKYTKDEALQHLRDLYRESLKKYRADVMTAKSPDGTEPDINELSFTELRDKLLALDP 160 (366)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~ 160 (366)
+++.+++++.++++++..++...+.|.+++.+++.+.++..+.... ..+......+.+.++.++..++.+.+
T Consensus 299 ~td~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~l~~~~l~~~~~~~~~ 370 (573)
T PLN02465 299 YTDTVVVVTCNPLSKWKEPPKIKPKYSEDERVQPLRDLYKESAGTK--------SSENPEPDIQEMGFGELRDKLLALDP 370 (573)
T ss_pred CcceEEEEeCCCCCCccCCcccccccchhhhhhhhhhhhhhhcccc--------ccccccccccccchHHHHHHHhhcCc
Confidence 9999999999998655434444445777777777655654442211 11111223344677788888888888
Q ss_pred ccchhhhhhhhhhhhhhccCCCeeeecCccccccccCCCcccccccccCCccccccccHHHHHHHHHHHHHhCCCCCCCc
Q 017772 161 LNKEHVIKVNQAEAEFWRKSEGYRVGWADEILGFDCGGQQWVSETCFPSGTLAKLSMKDLEYIEELKQLIEKEDIPAPAP 240 (366)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~e~~f~~~e~~vP~~~~~~~l~~i~~~i~~~~~~~~~~ 240 (366)
+.|.+++++|++...||..+.+.++++|+++|+++|++.|+++||+||.....-|..++.++|++|+++|+++++++++|
T Consensus 371 l~p~~~~~vn~~~~~~~~~s~~~~v~~S~~if~~~~~~~q~~~EyaiP~~~~~~~~~~~~~~l~el~~~i~~~~~~~~fP 450 (573)
T PLN02465 371 LDPDHVKRVNAAEAEFWRRSEGYRVGWSDEILGFDCGGQQWVSEVCFPAGTLAKPSMKDLEFMEELLALIEKEGIPAPAP 450 (573)
T ss_pred cchhhhHHHHHHHHHHhhcCCCcEeCcHHHhcCccccceeEEEEEEEeccccccccccHHHHHHHHHHHHHhcCCCCCCc
Confidence 88889999998777778777788999999999999999999877544433222233388899999999999999999999
Q ss_pred eEEEeecCCCCCccCCCC--CCCCCceeEEEEEEeecCCchhhhhhhhHHHHhhH-HHHHHHHHhhcCCccccccccCCC
Q 017772 241 IEQRWTARSQSVMSPAYS--SVQDDIFSWVGIIMYLPTMDARQRKEITDEFFNYR-HLSQKQLWDQYSAYEHWAKIEVPK 317 (366)
Q Consensus 241 i~vRf~~~d~~~LSp~~~--~~~d~~~~~i~v~~y~p~~~~~~~~~~~~~~~~~~-~~~e~~~~~~~gGRpHWgK~~~~~ 317 (366)
||+||+++|++||||+|+ ++. .+|||+|+||.|..+..+|++++++|..|| +.+ |+|+.+|||||||||.|...
T Consensus 451 iE~R~ta~dd~~LSpa~~~~~d~--~s~~I~i~~Y~~~~~~~~~~~~~~~~~~yf~~~~-e~i~~~yggRPHWgK~h~~~ 527 (573)
T PLN02465 451 IEQRWTASSSSPMSPASSPSPDD--LHSWVGIIMYLPTEDERQRKEITEEFFHYRKKTQ-RNLWDKYSAYEHWAKIEVPK 527 (573)
T ss_pred eEEEeecCCccccCcccCCCCCC--ceEEEEEEeccCCChhhhhhhhhHHHHHHHHHHH-HHHHHHcCCCcccceecccc
Confidence 999999999999999999 321 138999999988654667888999999998 888 59999999999999999933
Q ss_pred chHHHHHHHHHHHhcCChhHHHHHHHhcCCCCCCCcchHHhhcCC
Q 017772 318 DKEELAALQARLRKRFPVDSYNKARKELDPNRILSNNMLEKLFPL 362 (366)
Q Consensus 318 ~~~~~~~~~~~~~~~YP~~~F~~~r~~lDP~g~F~N~~~~rll~~ 362 (366)
+.+++.-..++++++|||++|+++|++|||+|+|+|+|++++||.
T Consensus 528 ~~~~~~~~~~~L~~~YP~d~F~~~R~~lDP~g~f~N~~L~~lf~~ 572 (573)
T PLN02465 528 DKEELEALRERLRKRFPVDAFNKARKELDPKGILSNNLLEKLFPK 572 (573)
T ss_pred ccchhhcCHHHHHhhCCHHHHHHHHHHhCCCCccCCHHHHHhhCC
Confidence 333333349999999999999999999999999999999999985
No 3
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=100.00 E-value=2.3e-56 Score=439.29 Aligned_cols=288 Identities=22% Similarity=0.364 Sum_probs=232.5
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEEEEeccHHHHHHHHHHHHhcCCcEEEEEec
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGLGGLGVVAEVTLQCVERQELVEHTTVSNIKEIKKNHKKLLSENKHVKYLHIP 80 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p 80 (366)
++||+|||++++||+++|||||||++||+|+|||||++|||++|.+.++......+++++++.++++++.++|++++|+|
T Consensus 131 l~vV~a~G~v~~~~~~~~~dLf~a~~g~~G~lGVIt~vtl~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 210 (419)
T TIGR01679 131 LRLVTAGGKVLDLSEGDDQDMYLAARVSLGALGVISQVTLQTVALFRLRRRDWRRPLAQTLERLDEFVDGHRHFEFYVFP 210 (419)
T ss_pred EEEEcCCCCEEEEcCCCCHHHHHHHHhCCCceEEEEEEEEEeecceEeEEEEEecCHHHHHHHHHHHHhcCCeEEEEEec
Confidence 58999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHhhhhccccCCCCCCCCcccchhhhHHHhhhhhcCC
Q 017772 81 YTDTVVVVTCNPVSKWKGPLKFKPKYTKDEALQHLRDLYRESLKKYRADVMTAKSPDGTEPDINELSFTELRDKLLALDP 160 (366)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~ 160 (366)
+++++++++.+++++... .......+... . .+..++... ... ..
T Consensus 211 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~---~~~~l~~~~-----------~~~--------~~---------- 254 (419)
T TIGR01679 211 FAGKALTITMDRSDEQPK---PRQRDVDENFL-G---GLRLLRQTL-----------RRF--------PS---------- 254 (419)
T ss_pred CCCeEEEEECCcCCCccc---ccccchhhhHH-H---HHHHHHHhc-----------ccC--------ch----------
Confidence 999999999999874321 11111111111 1 111111100 000 11
Q ss_pred ccchhhhhhhhhhhhhhccCCCeeeecCccccccccCCCcccccccccCCccccccccHHHHHHHHHHHHHhCCCCCCCc
Q 017772 161 LNKEHVIKVNQAEAEFWRKSEGYRVGWADEILGFDCGGQQWVSETCFPSGTLAKLSMKDLEYIEELKQLIEKEDIPAPAP 240 (366)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~e~~f~~~e~~vP~~~~~~~l~~i~~~i~~~~~~~~~~ 240 (366)
..+.++.....+. ++.+.++.|+++|+.++. .+|.++||+||.+++.++|++|++++++++.++++|
T Consensus 255 ----~~~~~~~~~~~~~--~~~~~~~~~~r~~~~~~~-------~~f~q~e~~iP~~~~~~al~~i~~~i~~~~~~~~~p 321 (419)
T TIGR01679 255 ----LRPRLNRLMTNMM--SSETVVDRAYKVFATQRK-------VRFNEMEYHLPRENGRKALQEVIDLVERRSPPVMFP 321 (419)
T ss_pred ----hHHHHHHHHHhhc--CCceeeccceEEeccccc-------ceeeEEEEecchhHHHHHHHHHHHHHHhcCCCccce
Confidence 1111111111222 266788999999986654 456777999999999999999999999999999999
Q ss_pred eEEEeecCCCCCccCCCCCCCCCceeEEEEEEeecCCchhhhhhhhHHHHhhHHHHHHHHHhhcCCccccccccCCCchH
Q 017772 241 IEQRWTARSQSVMSPAYSSVQDDIFSWVGIIMYLPTMDARQRKEITDEFFNYRHLSQKQLWDQYSAYEHWAKIEVPKDKE 320 (366)
Q Consensus 241 i~vRf~~~d~~~LSp~~~~~~d~~~~~i~v~~y~p~~~~~~~~~~~~~~~~~~~~~e~~~~~~~gGRpHWgK~~~~~~~~ 320 (366)
||+||+++|++||||++++++ |+|++++|.. .+ +++|+ +.+ |+++.+|||||||||+|.++
T Consensus 322 ve~R~~~ad~~~LS~~~~r~~----~~ia~~~~~~-~~-------~~~~~---~~~-e~i~~~~gGRpHwgK~~~l~--- 382 (419)
T TIGR01679 322 IEVRFSAPDDSWLSPFYGRPT----CSIAVHQYAG-MD-------FESYF---RAV-EPIFRRYAGRPHWGKRHYLT--- 382 (419)
T ss_pred EEEEEecCCCcccCCCCCCCc----EEEEEEEcCC-CC-------HHHHH---HHH-HHHHHHcCCCCCchhccCCC---
Confidence 999999999999999999985 6799999753 22 24666 457 49999999999999999998
Q ss_pred HHHHHHHHHHhcCC-hhHHHHHHHhcCCCCCCCcchHHhhcC
Q 017772 321 ELAALQARLRKRFP-VDSYNKARKELDPNRILSNNMLEKLFP 361 (366)
Q Consensus 321 ~~~~~~~~~~~~YP-~~~F~~~r~~lDP~g~F~N~~~~rll~ 361 (366)
+++++++|| |++|+++|+++||+|+|+|+|++|+||
T Consensus 383 -----~~~l~~~YP~~~~F~~~r~~~DP~g~F~n~~~~rl~~ 419 (419)
T TIGR01679 383 -----AATLRERYPRWDDFAAVRDDLDPDRRFLNPYTRGLFG 419 (419)
T ss_pred -----HHHHHHHCcCHHHHHHHHHHhCCCCccCCHHHHHhhC
Confidence 899999999 999999999999999999999999996
No 4
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.
Probab=100.00 E-value=8.7e-57 Score=442.91 Aligned_cols=291 Identities=26% Similarity=0.400 Sum_probs=230.8
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEEEEeccHHHHHHHHHHHHhcCCcEEEEEec
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGLGGLGVVAEVTLQCVERQELVEHTTVSNIKEIKKNHKKLLSENKHVKYLHIP 80 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p 80 (366)
++||+++|++++||+++++|||+|+++|+|+|||||+|||+++|.+.+.......+++++++.+++++++++|++++|||
T Consensus 137 l~vV~~~G~i~~~s~~~~~dlf~a~~~~~G~lGIIt~vtl~l~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p 216 (438)
T TIGR01678 137 LTIMTADGEVLECSEERNADVFQAARVSLGCLGIIVTVTIQVVPQFHLQETSFVSTLKELLDNWDSHWKSSEFFRVLWFP 216 (438)
T ss_pred EEEEcCCCcEEEeCCCCChhHHHHHhcCCCceEeeEEEEEEEEeccceEEEEecCCHHHHHHHHHHHhhcCCeEEEEEEc
Confidence 58999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHhhhhccccCCCCCCCCcccchhhhHHHhhhhhcCC
Q 017772 81 YTDTVVVVTCNPVSKWKGPLKFKPKYTKDEALQHLRDLYRESLKKYRADVMTAKSPDGTEPDINELSFTELRDKLLALDP 160 (366)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~ 160 (366)
+++++++++.++++.+.. ....+..+..+++. .+..++.... ..|...|.++++.+...
T Consensus 217 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~l~~~~~-------~~~~~~~~~~~~~~~~~--------- 275 (438)
T TIGR01678 217 YTENVVIWRQNKTNKAPS---SPSNSFWDYKLGFF--LYEFLLWTSK-------YLPCLTPWIERFFFWML--------- 275 (438)
T ss_pred CCCcEEEEECccCCCCcc---cccchhhhhhHHHH--HHHHHHHHHh-------hcccccHHHHHHHHHhh---------
Confidence 999999999999774321 11234444333321 2211111111 11333333322211110
Q ss_pred ccchhhhhhhhhhhhhhcc--CCCeeeecCccccccccCCCcccccccccCCccccccccHHHHHHHHHHHHHhC----C
Q 017772 161 LNKEHVIKVNQAEAEFWRK--SEGYRVGWADEILGFDCGGQQWVSETCFPSGTLAKLSMKDLEYIEELKQLIEKE----D 234 (366)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~~~~~~~~e~~f~~~e~~vP~~~~~~~l~~i~~~i~~~----~ 234 (366)
+... .....++.|+++|.+.|.|.|+++ ||+||++++.++|++|++++++. +
T Consensus 276 ---------------~~~~~~~~~~~~~~s~~~~~~~~~f~~~~~-------Ey~vP~~~~~~al~~l~~~~~~~~~~~~ 333 (438)
T TIGR01678 276 ---------------YGEKSSTKKESSNLSHKIFTMECRFSQHVQ-------EWGIPREKTKEALLELKAMLEAHAKNKE 333 (438)
T ss_pred ---------------cCCccCCCcceecchHHhhcccceeehhce-------eecccHHHHHHHHHHHHHHHHhcccccC
Confidence 0000 022478899999999998777654 58999999999999999999987 7
Q ss_pred CCCCCceEEEeecC---CCCCccCCCCCCCCCceeEEEEEEeecCCchhhhhhhhHHHHhhHHHHHHHHHhhcCCccccc
Q 017772 235 IPAPAPIEQRWTAR---SQSVMSPAYSSVQDDIFSWVGIIMYLPTMDARQRKEITDEFFNYRHLSQKQLWDQYSAYEHWA 311 (366)
Q Consensus 235 ~~~~~~i~vRf~~~---d~~~LSp~~~~~~d~~~~~i~v~~y~p~~~~~~~~~~~~~~~~~~~~~e~~~~~~~gGRpHWg 311 (366)
..++|||||||+++ |++||||+|+|++ |||++++|++.....+ .++|+ +.+ |+++.+||||||||
T Consensus 334 ~~v~fpiEvR~~~~~~~Dd~wLSp~~~rds----~~i~~~~y~~~~~~~~----~~~~f---~~~-E~i~~~~gGRPHWg 401 (438)
T TIGR01678 334 VYAHYPVEVRFTRGTLPDECLLSPCFQVDT----CYINAIMYRPFGKDVP----RLDYF---LAY-ETIMKKFGGKPHWA 401 (438)
T ss_pred ceEeeeEEEEEeCCCCCCceecCCCCCCce----EEEEEEEccCCCCCCC----HHHHH---HHH-HHHHHHcCCCCCch
Confidence 88999999999999 9999999999985 8999999987532211 24555 668 49999999999999
Q ss_pred cccC-CCchHHHHHHHHHHHhcCC-hhHHHHHHHhcCCCCCCCcc
Q 017772 312 KIEV-PKDKEELAALQARLRKRFP-VDSYNKARKELDPNRILSNN 354 (366)
Q Consensus 312 K~~~-~~~~~~~~~~~~~~~~~YP-~~~F~~~r~~lDP~g~F~N~ 354 (366)
|+|. +. ..+++++|| |++|+++|+++||+|+|+|+
T Consensus 402 K~h~~~~--------~~~l~~~YP~~~~F~~vr~~~DP~g~F~N~ 438 (438)
T TIGR01678 402 KAHNVCK--------QKDFEEMYPTLHKFCDIRKKLDPTGVFLNS 438 (438)
T ss_pred hcccccC--------HHHHHHHCcCHHHHHHHHHhhCcccccCCC
Confidence 9999 66 788999999 99999999999999999996
No 5
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=100.00 E-value=1.7e-52 Score=420.57 Aligned_cols=314 Identities=16% Similarity=0.199 Sum_probs=223.8
Q ss_pred CEEEcCCC------CEEEEcCCCChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEEEEeccHHHHHHHHHHHHhcCCcE
Q 017772 1 MKLVTPAK------GTIEVSKEKDPDLFYLARCGLGGLGVVAEVTLQCVERQELVEHTTVSNIKEIKKNHKKLLSENKHV 74 (366)
Q Consensus 1 ~~lV~~~G------~i~~~s~~~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (366)
++||+++| ++++||+++|||||||++||+|+|||||+||||++|.+...........+++.+.++++.++++++
T Consensus 161 l~vV~a~G~a~G~~~v~~~s~~~~~dLf~a~rgslG~lGVVtevTL~~~P~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 240 (557)
T TIGR01677 161 IRLVVPASAAEGFAKVRILSEGDTPNEFNAAKVSLGVLGVISQVTLALQPMFKRSVTYTMRDDSDFEDQFVTFGKKHEFA 240 (557)
T ss_pred EEEEeCCCcccCcceEEEeCCCCCHHHHHhhccCCCccEeeeEEEEEEEccccceEEEEcCCHHHHHHHHHHhhcCCeEE
Confidence 58999998 899999999999999999999999999999999999998666667778888888899999999999
Q ss_pred EEEEeccCCeEEEEEecCCCCCCCCCCCCCCCc--hhh----hhhhHHHHHHHHHHHhhhhccccCCCCCCCCcccchhh
Q 017772 75 KYLHIPYTDTVVVVTCNPVSKWKGPLKFKPKYT--KDE----ALQHLRDLYRESLKKYRADVMTAKSPDGTEPDINELSF 148 (366)
Q Consensus 75 ~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 148 (366)
+++|+|+++++++++.++++.+... .....+. .+. .+++ ......+..... ..-...+. ...
T Consensus 241 ~f~w~P~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~---~~~ 308 (557)
T TIGR01677 241 DITWYPSQGKAVYRRDDRVPVNASG-NGVNDFLGFRSTLIAAIAGI--RALEETFERSRN------ANGKCVTA---TIT 308 (557)
T ss_pred EEEEECCCCeEEEEecCcCCCCCCc-chhhhhccccccchhhhhhh--hhhhHHHhhhcc------cccceecc---ccc
Confidence 9999999999999998887653211 1111111 010 0000 000000000000 00000000 000
Q ss_pred hHHHhhhhhcCCccchhhhhh-hhhhh---hhhccCCCeeeecCcccccc-ccCCC---------cc-ccc---ccccCC
Q 017772 149 TELRDKLLALDPLNKEHVIKV-NQAEA---EFWRKSEGYRVGWADEILGF-DCGGQ---------QW-VSE---TCFPSG 210 (366)
Q Consensus 149 ~~l~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~s~~~~~~-~~~~~---------~~-~~e---~~f~~~ 210 (366)
... .+.+ +.... .. .+....++.++++|.. .|... .+ ... ..|.++
T Consensus 309 ~~~--------------~~~~~~~~~~~~~~~--~~~~~~~g~s~~v~~~~~c~~~~~~~~~~~~~~~~~~~~~~~f~e~ 372 (557)
T TIGR01677 309 SAA--------------LFLPGYGLTNSGGII--FTGYPVVGSQGRMQTSGSCLDSPQDGLLTACAWDPRYKGLFFFHQT 372 (557)
T ss_pred cch--------------hhhhccccccccccc--ccCCceecchHhhcccccccccccccccccCccccccccccceeEE
Confidence 000 0000 00000 00 1123367888888863 22211 11 111 237889
Q ss_pred ccccccccHHHHHHHHHHHHHhC-----CCCCCCceEEEeecCCCCCccCCCCCCCCCceeEEEEEEeecCCchhhhhhh
Q 017772 211 TLAKLSMKDLEYIEELKQLIEKE-----DIPAPAPIEQRWTARSQSVMSPAYSSVQDDIFSWVGIIMYLPTMDARQRKEI 285 (366)
Q Consensus 211 e~~vP~~~~~~~l~~i~~~i~~~-----~~~~~~~i~vRf~~~d~~~LSp~~~~~~d~~~~~i~v~~y~p~~~~~~~~~~ 285 (366)
||+||++++.++|++|++++++. ...+++||||||+++|++|||| +|++ |||+|++|++.....+++
T Consensus 373 EyavP~e~~~~al~~vr~~~~~~~~~~~~~~~~fpievR~v~aDd~wLSp--~rds----~~i~~~~~~~~~~~~~~~-- 444 (557)
T TIGR01677 373 TLSVPVSRFRDFVLDVKRLRDMEPKSLCGVELYNGILIRYVKASPAYLGK--EEDA----VDFDFTYYRAKDPLTPRL-- 444 (557)
T ss_pred EEEeeHHHHHHHHHHHHHHHHhcccccCceeeecCeEEEEecCCccccCC--CCce----EEEEEEEecCCCCcccch--
Confidence 99999999999999999999977 6788999999999999999999 7874 789999997654323221
Q ss_pred hHHHHhhHHHHHHHH-HhhcCCccccccccCCCchHHHHHHHHHHHhcCC-hhHHHHHHHhcCCCCCCCcchHHhhcCC
Q 017772 286 TDEFFNYRHLSQKQL-WDQYSAYEHWAKIEVPKDKEELAALQARLRKRFP-VDSYNKARKELDPNRILSNNMLEKLFPL 362 (366)
Q Consensus 286 ~~~~~~~~~~~e~~~-~~~~gGRpHWgK~~~~~~~~~~~~~~~~~~~~YP-~~~F~~~r~~lDP~g~F~N~~~~rll~~ 362 (366)
.++|+ +.+| ++ +.+|||||||||+|.+. +++++++|| |++|+++|+++||+|+|+|+|++++||.
T Consensus 445 ~~~~f---~~~E-~i~l~~yggRPHWGK~h~~~--------~~~l~~~YP~~~dF~alR~~~DP~g~F~N~yl~~l~~~ 511 (557)
T TIGR01677 445 YEDVI---EEIE-QMAFFKYGALPHWGKNRNLA--------FDGVIRKYPNADKFLKVKDSYDPKGLFSSEWSDEILGI 511 (557)
T ss_pred HHHHH---HHHH-HHHHhhcCCCCCccccccch--------HHHHHHhCCCHHHHHHHHHhcCCCCccCCHHHHHHhCc
Confidence 23444 6785 87 99999999999999998 899999999 9999999999999999999999999986
No 6
>PF04030 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: IPR007173 This domain is specific to D-arabinono-1,4-lactone oxidase 1.1.3.37 from EC, which is involved in the final step of the D-erythroascorbic acid biosynthesis pathway [].; GO: 0003885 D-arabinono-1,4-lactone oxidase activity, 0055114 oxidation-reduction process, 0016020 membrane; PDB: 2VFU_A 2VFV_A 2VFT_A 2VFS_A 2VFR_A.
Probab=100.00 E-value=9.5e-47 Score=349.84 Aligned_cols=257 Identities=32% Similarity=0.496 Sum_probs=95.0
Q ss_pred EEEEeEecceeEEEEEeccHHHHHHHHHHHHhcCCcEEEEEeccCCeEEEEEecCCCCCCCCCCCCCCCchhhhhhhHHH
Q 017772 38 VTLQCVERQELVEHTTVSNIKEIKKNHKKLLSENKHVKYLHIPYTDTVVVVTCNPVSKWKGPLKFKPKYTKDEALQHLRD 117 (366)
Q Consensus 38 vtl~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (366)
|||||+|++.++.+....+++++++.+++++++++|++++|||+++++++++.++++.+... ...+..+..++..
T Consensus 1 VTlq~~p~f~L~~~~~~~~~~e~l~~~~~~~~~~~h~e~~wfP~t~~~~v~~~~~t~~~~~~---~~~~~~~~~l~~~-- 75 (259)
T PF04030_consen 1 VTLQCVPAFRLRERERPEPLDEVLENLDELLASHDHFEFFWFPYTDKVVVKTWNRTDEPPSK---PRNWFDDELLGNF-- 75 (259)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccc--
Confidence 79999999999999999999999999999999999999999999999999999999875411 1223333333211
Q ss_pred HHHHHHHHhhhhccccCCCCCCCCcccchhhhHHHhhhhhcCCccchhhhhhhhhhhhhhccCCCeeeecCccccccccC
Q 017772 118 LYRESLKKYRADVMTAKSPDGTEPDINELSFTELRDKLLALDPLNKEHVIKVNQAEAEFWRKSEGYRVGWADEILGFDCG 197 (366)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 197 (366)
++..++... ...|...|.++...+ .....+....++.|++++.+.|+
T Consensus 76 ~~~~l~~~~-------~~~p~~~~~~~~~~~--------------------------~~~~~~~~~~~~~s~~~~~~~~~ 122 (259)
T PF04030_consen 76 AFEALLWLA-------RWFPSLTPPINRLSF--------------------------RLLSSSPTERVDPSYRVFNFDCL 122 (259)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccc-------ccccccccccccccc--------------------------ccccccccccccccccccccccc
Confidence 111111100 011222222211111 11111246788999999999998
Q ss_pred CCcccccccccCCccccccccHHHHHHHHHHHHHhCC-CCCCCceEEEeecCCCCCccCCCCCCCCCceeEEEEEEeecC
Q 017772 198 GQQWVSETCFPSGTLAKLSMKDLEYIEELKQLIEKED-IPAPAPIEQRWTARSQSVMSPAYSSVQDDIFSWVGIIMYLPT 276 (366)
Q Consensus 198 ~~~~~~e~~f~~~e~~vP~~~~~~~l~~i~~~i~~~~-~~~~~~i~vRf~~~d~~~LSp~~~~~~d~~~~~i~v~~y~p~ 276 (366)
++++.+ ||+||++++.++|++|++++++++ .++++||++||+++|++||||+++++ +|||++++|++.
T Consensus 123 ~~~~~~-------E~~iP~~~~~~~l~~l~~~~~~~~~~~~~~pie~R~~~~d~~~Ls~~~~~~----~~~i~~~~~~~~ 191 (259)
T PF04030_consen 123 VRFWEM-------EYAIPIENAPEALRELRALIDKEGGFPVHFPIEVRFVKADDAWLSPAYGRD----TCYIEIHMYRPM 191 (259)
T ss_dssp ----EE-------EEEEEGGGHHHHHHHHHHTHHHHG--GGEEEEEEEEE--B-STT-TTBTS-----EEEEEEEE-S-H
T ss_pred ccceeE-------EEeeCHHHHHHHHHHHHHHHHHcccCceeEEEEEEEECCChhhcCCCCCCC----EEEEEEEEeCCc
Confidence 766654 679999999999999999999887 88999999999999999999999987 389999999764
Q ss_pred CchhhhhhhhHHHHhhHHHHHHHHHhhcCCccccccccCCCchHHHHHHHHHHHhcCC-hhHHHHHHHhcCCCCCCCcch
Q 017772 277 MDARQRKEITDEFFNYRHLSQKQLWDQYSAYEHWAKIEVPKDKEELAALQARLRKRFP-VDSYNKARKELDPNRILSNNM 355 (366)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~gGRpHWgK~~~~~~~~~~~~~~~~~~~~YP-~~~F~~~r~~lDP~g~F~N~~ 355 (366)
....+ +++|+ +.+ ++++.++||||||||++.++ .++++++|| |++|+++|+++||+|+|+|+|
T Consensus 192 ~~~~~----~~~~~---~~~-e~~~~~~ggRpHWgK~~~~~--------~~~l~~~Yp~~~~F~~~r~~~DP~g~F~n~~ 255 (259)
T PF04030_consen 192 GDPVP----YEEFF---RAF-EQILRKYGGRPHWGKNHTLT--------AEQLRKLYPRLDDFLAVRKKLDPQGVFLNDY 255 (259)
T ss_dssp H---H----HHHHH---HHH-HHHHGGGT-EE-TTS-------------HHHHHHT-TTHHHHHHHHHHH-TT-TT--HH
T ss_pred ccccc----HHHHH---HHH-HHHHHHcCCEECcCcCCCCC--------HHHHHHHCcCHHHHHHHHHHhCCCCCCCCHh
Confidence 32211 35566 557 48999999999999999887 888999999 999999999999999999999
Q ss_pred HHhh
Q 017772 356 LEKL 359 (366)
Q Consensus 356 ~~rl 359 (366)
++|+
T Consensus 256 ~~r~ 259 (259)
T PF04030_consen 256 LRRV 259 (259)
T ss_dssp HH--
T ss_pred hhcC
Confidence 9985
No 7
>KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms]
Probab=100.00 E-value=3.3e-42 Score=323.98 Aligned_cols=335 Identities=24% Similarity=0.306 Sum_probs=242.0
Q ss_pred EEEcCCCCEEEEcCCCChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEEEEeccHHHHHHHHH-HHHhcCCcEEEEEec
Q 017772 2 KLVTPAKGTIEVSKEKDPDLFYLARCGLGGLGVVAEVTLQCVERQELVEHTTVSNIKEIKKNHK-KLLSENKHVKYLHIP 80 (366)
Q Consensus 2 ~lV~~~G~i~~~s~~~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~w~p 80 (366)
.++.++|.++++|++.+||+|+|+++|||.||||++|||+|+|++++..+....+..++++++. ++.+++++++++|+|
T Consensus 174 ~~~~~~G~v~~Ls~e~dpe~F~AAkvSLG~LGVIs~VTl~~vp~Fk~s~t~~v~n~~dl~~d~~~~~~~~~EF~~~~w~P 253 (518)
T KOG4730|consen 174 PITPADGFVVVLSEEKDPELFNAAKVSLGVLGVISQVTLSVVPAFKRSLTYVVTNDSDLFKDWKVTLGESHEFVDVLWYP 253 (518)
T ss_pred eeccCCceEEEecccCCHHHHhhhhhcccceeEEEEEEEEEEecceeeeEEEEechHHHHHHHHHHhcccccceEEEEec
Confidence 3567999999999999999999999999999999999999999999999999999999998888 888999999999999
Q ss_pred cCCeEEEEEecCCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHhhhhccccCCCCCCCCcccchhhhHHHhhhhhcCC
Q 017772 81 YTDTVVVVTCNPVSKWKGPLKFKPKYTKDEALQHLRDLYRESLKKYRADVMTAKSPDGTEPDINELSFTELRDKLLALDP 160 (366)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~ 160 (366)
++++++++++|+++.+..++++.+......++......+..-+.+++..+......+...|.+..++++..+..++..+.
T Consensus 254 y~~kvV~~~~nrv~~ntg~~~f~p~~~~~s~~~~~~~s~~e~~~~~r~~~~kc~~a~~~tp~l~~~sf~~~~~~~~~t~~ 333 (518)
T KOG4730|consen 254 YTGKVVYRRDNRVPVNTGLPDFKPFRPQPSAVLAKLRSFEESIELFRDANGKCVSADSVTPYLERFSFGLTNGGKLFTGY 333 (518)
T ss_pred cCCeEEEEecCccccccCCccccCCCCcHHHHHHHHHHHHHHHHHhhhccCceecCcccchhHHHhhhheecCcEeeecC
Confidence 99999999999999887665555555555556555555555555443322211122345677777777777644433332
Q ss_pred ccchhhhhhhhhhhhhhccCCCeeeecCccccccccCCCcccccccccCCccccccccHHHHHHHHHHHHH-----hCCC
Q 017772 161 LNKEHVIKVNQAEAEFWRKSEGYRVGWADEILGFDCGGQQWVSETCFPSGTLAKLSMKDLEYIEELKQLIE-----KEDI 235 (366)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~e~~f~~~e~~vP~~~~~~~l~~i~~~i~-----~~~~ 235 (366)
..-.....++.....+|..+.+.+..|..++.++.| .+.-..+|++.+.+|+.+++.+.. .++.
T Consensus 334 pvig~q~~~~~s~sCl~s~~~g~~~~W~~ri~g~f~-----------~qt~~s~pl~~~~~ai~dik~l~~ie~~~~c~~ 402 (518)
T KOG4730|consen 334 PVIGVQGKMMSSGSCLDSQSDGTACEWDPRIKGFFF-----------HQTTFSIPLTAVKDAINDIKDLVKIEPKSLCGL 402 (518)
T ss_pred cccCccchhccchhhhhhccCccccCCCccccCchh-----------heeeeccchhhhhhHhhhhhhhcccChhhhhhh
Confidence 221112222223334554444455556666655433 223457899999999999999873 4667
Q ss_pred CCCCceEEEeecCCCCCccCCCCCCCCCceeEEEEEEeecCCchhhhhhh-hHHHHhhHHHHHHHHHh-hcCCccccccc
Q 017772 236 PAPAPIEQRWTARSQSVMSPAYSSVQDDIFSWVGIIMYLPTMDARQRKEI-TDEFFNYRHLSQKQLWD-QYSAYEHWAKI 313 (366)
Q Consensus 236 ~~~~~i~vRf~~~d~~~LSp~~~~~~d~~~~~i~v~~y~p~~~~~~~~~~-~~~~~~~~~~~e~~~~~-~~gGRpHWgK~ 313 (366)
..+.||.+|+++++.++|. +.++. |-+++.+|+. .+..|.... .+.++ ++.+| ++.. +|||.|||||+
T Consensus 403 ~~~~pi~iR~~t~sPayl~----~t~~~--~~fd~~Y~~a-~dyrp~~~~l~e~~~--~e~lE-q~al~kyna~PHWaKn 472 (518)
T KOG4730|consen 403 ETYNPILIRYVTSSPAYLG----KTSED--CDFDTTYYRA-KDYRPLTPRLYEDFY--FEELE-QIALFKYNAKPHWAKN 472 (518)
T ss_pred hhccceeEEEecCCchhhc----cCccc--ceeeeeeeec-cCCCcCCCCcchhHH--HHHHH-HHHHHHhcCCcchhhh
Confidence 7778999999999888863 33322 3355444432 211221111 23322 36676 5554 99999999999
Q ss_pred cCCCchHHHHHHHHHHHhcCC-hhHHHHHHHhcCCCCCCCcchHHhhcCCCCC
Q 017772 314 EVPKDKEELAALQARLRKRFP-VDSYNKARKELDPNRILSNNMLEKLFPLSDT 365 (366)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~YP-~~~F~~~r~~lDP~g~F~N~~~~rll~~~~~ 365 (366)
..+. .+.+.+.|| ++.|+++|+++||+|+|+|.|.+.|||..++
T Consensus 473 ~~la--------fe~vi~ky~n~~~flkvr~~lDP~~lFssew~d~il~~~g~ 517 (518)
T KOG4730|consen 473 RNLA--------FEGVIRKYKNLDKFLKVRKELDPKGLFSSEWTDQILGVKGN 517 (518)
T ss_pred hhhh--------HHHHHHhccChHHHHHHHHhcCccchhhhhhHHHHhcccCC
Confidence 9776 777899999 9999999999999999999999999998776
No 8
>PLN00107 FAD-dependent oxidoreductase; Provisional
Probab=100.00 E-value=2e-37 Score=276.88 Aligned_cols=153 Identities=16% Similarity=0.210 Sum_probs=130.8
Q ss_pred cccccccCCCcccc-cccccCCccccccccHHHHHHHHHHHHHhC-----CCCCCCceEEEeecCCCCCccCCCCCCCCC
Q 017772 190 EILGFDCGGQQWVS-ETCFPSGTLAKLSMKDLEYIEELKQLIEKE-----DIPAPAPIEQRWTARSQSVMSPAYSSVQDD 263 (366)
Q Consensus 190 ~~~~~~~~~~~~~~-e~~f~~~e~~vP~~~~~~~l~~i~~~i~~~-----~~~~~~~i~vRf~~~d~~~LSp~~~~~~d~ 263 (366)
..+...|.+...+. ...|.++||+||++++.++|++|++++++. ...+++|||+||+++|++||||+ +++
T Consensus 44 ~~~~~~c~wd~r~~~g~~F~E~EyaVP~e~~~~aL~elr~l~~~~~~~l~~~ev~fPIevR~vaADdawLSp~--rDS-- 119 (257)
T PLN00107 44 DGLITACPWDPRIKHGEFFFQSAISVPLSGAAAFINDIKALRDIEPDALCGLELNYGVLLRYVRASPAHLGKE--EDA-- 119 (257)
T ss_pred ccccccCCCCccccCCcceEEEEEEecHHHHHHHHHHHHHHHHhCcccccccccccCeEEEEecCcchhhCCC--CCe--
Confidence 33555788877775 788999999999999999999999999886 68899999999999999999995 764
Q ss_pred ceeEEEEEEeecCCc-hhhhhhhhHHHHhhHHHHHHHH-HhhcCCccccccccCCCchHHHHHHHHHHHhcCC-hhHHHH
Q 017772 264 IFSWVGIIMYLPTMD-ARQRKEITDEFFNYRHLSQKQL-WDQYSAYEHWAKIEVPKDKEELAALQARLRKRFP-VDSYNK 340 (366)
Q Consensus 264 ~~~~i~v~~y~p~~~-~~~~~~~~~~~~~~~~~~e~~~-~~~~gGRpHWgK~~~~~~~~~~~~~~~~~~~~YP-~~~F~~ 340 (366)
++|+|++|++..+ ..+ ..+.+|++.+| ++ +.+|||||||||+|.+. +++++++|| |++|++
T Consensus 120 --v~I~~~~yr~~~~~~~p-----r~~~~~f~eiE-qial~kygGRPHWGK~h~l~--------~~~l~~lYPr~~dFla 183 (257)
T PLN00107 120 --LDFDLTYYRSKDDPAAP-----RLHEDAMEEIE-QMAILKYGALPHWGKNRNAA--------FDGAIAKYKKAGEFLK 183 (257)
T ss_pred --EEEEEEEecccCCcccc-----ccHHHHHHHHH-HHHHHhcCCcCCchhccCCC--------HHHHHHHCcCHHHHHH
Confidence 6899999975422 111 23333446785 66 99999999999999998 899999999 999999
Q ss_pred HHHhcCCCCCCCcchHHhhcCC
Q 017772 341 ARKELDPNRILSNNMLEKLFPL 362 (366)
Q Consensus 341 ~r~~lDP~g~F~N~~~~rll~~ 362 (366)
+|+++||+|+|+|+|++++||.
T Consensus 184 vR~~lDP~G~F~N~yl~rllg~ 205 (257)
T PLN00107 184 VKERLDPEGLFSSEWSDKILGL 205 (257)
T ss_pred HHHHhCCCCccCCHHHHHHhCc
Confidence 9999999999999999999987
No 9
>PLN02441 cytokinin dehydrogenase
Probab=99.84 E-value=8.2e-19 Score=175.20 Aligned_cols=90 Identities=18% Similarity=0.291 Sum_probs=79.2
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEE--EEeccHHHHHHHHHHHHh-----cCCc
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGLGGLGVVAEVTLQCVERQELVEH--TTVSNIKEIKKNHKKLLS-----ENKH 73 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~ 73 (366)
++||+|+|++++||+++|+|||||++||+|+|||||++||+++|++..... ....++++++++++++++ +.+|
T Consensus 197 leVVtadGevv~~s~~~n~DLF~Av~GglG~fGIIT~atlrL~Pap~~v~~~~~~y~~~~~~~~d~~~li~~~~~~~~d~ 276 (525)
T PLN02441 197 LDVVTGKGEVVTCSPTQNSDLFFAVLGGLGQFGIITRARIALEPAPKRVRWIRVLYSDFSTFTRDQERLISRPPENSFDY 276 (525)
T ss_pred EEEEeCCceEEEeCCCCChhHHHhhccCCCCcEEEEEEEEEEEecCCceEEEEEEcCCHHHHHHHHHHHHhcCCCCCcce
Confidence 589999999999999999999999999999999999999999999875433 346799999999999887 7899
Q ss_pred EEEEEecc-CCeEEEEEe
Q 017772 74 VKYLHIPY-TDTVVVVTC 90 (366)
Q Consensus 74 ~~~~w~p~-~~~~~~~~~ 90 (366)
+|++|+|+ ++.+..++.
T Consensus 277 veg~~~p~~~~~~~~~~~ 294 (525)
T PLN02441 277 VEGFVIVNRNGLINNWRS 294 (525)
T ss_pred EeEEEEeCCCCceeeeec
Confidence 99999999 676666653
No 10
>PF09129 Chol_subst-bind: Cholesterol oxidase, substrate-binding; InterPro: IPR015213 The substrate-binding domain found in cholesterol oxidase is composed of an eight-stranded mixed beta-pleated sheet and six alpha-helices. This domain is positioned over the isoalloxazine ring system of the FAD cofactor bound by the FAD-binding domain (IPR006094 from INTERPRO) and forms the roof of the active site cavity, allowing for catalysis of oxidation and isomerisation of cholesterol to cholest-4-en-3-one []. ; PDB: 3JS8_A 1I19_B 2I0K_A.
Probab=99.47 E-value=6.1e-12 Score=113.03 Aligned_cols=262 Identities=18% Similarity=0.285 Sum_probs=118.7
Q ss_pred eccHHHHHH-------HHHHHHhcCCcEEEEEeccCCeEEEEEecCCCCCCCC-CCCC--CCC-chhhhhhhHHHHHHHH
Q 017772 54 VSNIKEIKK-------NHKKLLSENKHVKYLHIPYTDTVVVVTCNPVSKWKGP-LKFK--PKY-TKDEALQHLRDLYRES 122 (366)
Q Consensus 54 ~~~~~~~~~-------~~~~~~~~~~~~~~~w~p~~~~~~~~~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~ 122 (366)
-++..|+++ .++..+++.--+|..|||++++-+++-+..++..+.. .... .++ +.|.+...+.++...
T Consensus 9 dIpa~eLFA~~gs~gRT~~sfld~sGR~EaIWfPFT~~PWLKVWs~sP~kP~~SR~V~~PyNYpFSD~ip~~vtDLi~~- 87 (321)
T PF09129_consen 9 DIPATELFAAPGSGGRTFASFLDRSGRVEAIWFPFTDNPWLKVWSVSPTKPLLSREVTGPYNYPFSDNIPEPVTDLIGQ- 87 (321)
T ss_dssp -S-HHHHT--TT-SSS-HHHHHHHCSEEEEEE-TT-SS-EEEEEEE-SS--TTSEE-SSS---HHHHS--HHHHHHHHH-
T ss_pred CCCHHHhcCCCCCCCccHHHHHhhcCcEEEEEecCCCCcceeeeccCCCCCCcccccCCCCCCCccccccHHHHHHHHH-
Confidence 356666665 4666777788899999999999888777665532111 1111 122 234444444444332
Q ss_pred HHHhhhhccccCCCCCCCCcccchhhhHHHhhhhhcCCccchhhhhhhhhhhhhhccCCCeeeecCccccccccCCCccc
Q 017772 123 LKKYRADVMTAKSPDGTEPDINELSFTELRDKLLALDPLNKEHVIKVNQAEAEFWRKSEGYRVGWADEILGFDCGGQQWV 202 (366)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 202 (366)
...| .+...|.++..-.....-.|. .+...+-.|+|-+++.+-+.
T Consensus 88 ---i~~g------~~~ltP~~Gq~q~~~~~aGL~---------------------~t~s~DiWGwSkd~l~Yirp----- 132 (321)
T PF09129_consen 88 ---IVAG------NPGLTPLFGQTQYAITGAGLA---------------------ATDSSDIWGWSKDVLLYIRP----- 132 (321)
T ss_dssp ---HHTT-------GGGHHHHHHHHHHHHHHHHH---------------------HTT-SEEEEEHHHHH----T-----
T ss_pred ---HHcC------CccccchhhHHHHHHHHHHHh---------------------cccccccccccccceeEecc-----
Confidence 2221 133334333322222111100 01245677888877665443
Q ss_pred ccccccCCcccc--ccccHHHHHHHHHHHHH--------hCCCCCCCceEEEeecCCC-----------CCccCCCCCC-
Q 017772 203 SETCFPSGTLAK--LSMKDLEYIEELKQLIE--------KEDIPAPAPIEQRWTARSQ-----------SVMSPAYSSV- 260 (366)
Q Consensus 203 ~e~~f~~~e~~v--P~~~~~~~l~~i~~~i~--------~~~~~~~~~i~vRf~~~d~-----------~~LSp~~~~~- 260 (366)
+-.+....-|+| -+++...++.++.+..+ +..++++.|||||.++=|+ --||....|+
T Consensus 133 TTLRVTAnGyAVlTrRaniQrVi~eF~~~y~~r~~~Y~~~G~yP~NgPvEIRvtGLD~p~dv~v~~a~~P~LSAlrPrpD 212 (321)
T PF09129_consen 133 TTLRVTANGYAVLTRRANIQRVINEFVAFYQERLAAYQAQGQYPMNGPVEIRVTGLDQPADVGVPGAVPPTLSALRPRPD 212 (321)
T ss_dssp TS---EEEEEEEEE-GGGHHHHHHHHHHHHHHHHHHHHHTT-----S-EEEEEEE---GGGSSSTTS-S-TT-TT---TT
T ss_pred ceEEEecCCEEEEecHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCceEEEEecCCChhhcCCCCCCCccccccCCCCC
Confidence 123333345666 35566666666655543 3668899999999997544 2355332222
Q ss_pred --CCCceeEEEEEEeecCCchhhhhhhhHHHHhhHHHHHHHHHhhcCC-----ccccccccCCCch--H-HHHHHHHHHH
Q 017772 261 --QDDIFSWVGIIMYLPTMDARQRKEITDEFFNYRHLSQKQLWDQYSA-----YEHWAKIEVPKDK--E-ELAALQARLR 330 (366)
Q Consensus 261 --~d~~~~~i~v~~y~p~~~~~~~~~~~~~~~~~~~~~e~~~~~~~gG-----RpHWgK~~~~~~~--~-~~~~~~~~~~ 330 (366)
.=++.-|++|... |..+. ..+|+ +++|+-++..|.| ||.|.|-+..+.. + +-..+...+.
T Consensus 213 hpeWDvAiWldvLtl-PGTP~------a~~Fy---re~EqWm~~~y~g~yAt~RpEWSKGWayt~~~aw~d~~~l~~~iP 282 (321)
T PF09129_consen 213 HPEWDVAIWLDVLTL-PGTPG------ANAFY---REMEQWMFSNYSGSYATVRPEWSKGWAYTDDAAWTDETVLTTTIP 282 (321)
T ss_dssp -TT--EEEEEEEEE--TT-TT------HHHHH---HHHHHHHHHHSBTTTEEEEE-TTSB-S-SSS-TT--HHHHHTHHH
T ss_pred CCCcceEEEEeeccC-CCCcc------HHHHH---HHHHHHHHhhcCCccceEeeeeccccccCCCccccChhHHhhhch
Confidence 1123457887764 65443 24666 4576444456887 9999998876522 1 2122222233
Q ss_pred hcC----C----hhHHHHHHHhcCCCCCCCcchHHhhcC
Q 017772 331 KRF----P----VDSYNKARKELDPNRILSNNMLEKLFP 361 (366)
Q Consensus 331 ~~Y----P----~~~F~~~r~~lDP~g~F~N~~~~rll~ 361 (366)
+.| | |+.-.+...++||+++|+|+|+++||+
T Consensus 283 ~~~~~G~p~~~~Wd~A~atL~~~DPhriFss~llD~Llp 321 (321)
T PF09129_consen 283 NSYRAGQPADDNWDTARATLNRYDPHRIFSSPLLDRLLP 321 (321)
T ss_dssp HHTTTTS-CCCSHHHHHHHHHHH-TT--S--HHHHHH--
T ss_pred HHHhcCCCCCCCHHHHHHHHhccCccchhccHHHHhhcC
Confidence 344 4 777777788999999999999999984
No 11
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion]
Probab=99.29 E-value=1.9e-11 Score=122.38 Aligned_cols=119 Identities=13% Similarity=0.070 Sum_probs=79.9
Q ss_pred CccccccccHHHHHHHHHHHHHhCCCCCCCceEEEeecCCCCCccCCCCCCCCCceeEEEEEEeecCCchhhhhhhhHHH
Q 017772 210 GTLAKLSMKDLEYIEELKQLIEKEDIPAPAPIEQRWTARSQSVMSPAYSSVQDDIFSWVGIIMYLPTMDARQRKEITDEF 289 (366)
Q Consensus 210 ~e~~vP~~~~~~~l~~i~~~i~~~~~~~~~~i~vRf~~~d~~~LSp~~~~~~d~~~~~i~v~~y~p~~~~~~~~~~~~~~ 289 (366)
.++.+|.++..++++++.+.+.+.+. .+++...+..+|.. +. +.+... . .+.... .+..
T Consensus 336 ~d~~vp~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dg~-~~-------------~~~~~~-~-~~~~~~---~~~~ 394 (459)
T COG0277 336 EDVVVPLEALPEFLREILALLDKAGL--ALRVALFGHAGDGN-LH-------------LNILYD-V-GDEAEE---LARA 394 (459)
T ss_pred cceeeeHHHHHHHHHHHHHHHHhcCC--CceeeeecccCCCc-ce-------------eeeccC-C-CccHHH---HHHH
Confidence 36799999999999999999998754 33445555555432 32 222111 1 110000 1122
Q ss_pred HhhHHHHHHHHHhhcCCccccccccCCCchHHHHHHHHHHHhcCC---hhHHHHHHHhcCCCCCCCcchHHh
Q 017772 290 FNYRHLSQKQLWDQYSAYEHWAKIEVPKDKEELAALQARLRKRFP---VDSYNKARKELDPNRILSNNMLEK 358 (366)
Q Consensus 290 ~~~~~~~e~~~~~~~gGRpHWgK~~~~~~~~~~~~~~~~~~~~YP---~~~F~~~r~~lDP~g~F~N~~~~r 358 (366)
..+.+.+ ..++.++||+++|.+..... ...+...|+ |..++++|+++||+|+|.+..+.+
T Consensus 395 ~~~~~~i-~~~~~~~gG~~~~~h~~g~~--------~~~~~~~~~~~~~~~~~~~k~~~DP~~i~npg~~~~ 457 (459)
T COG0277 395 EALNEAI-EALAVELGGSISGEHGIGRT--------KAEFLELEPGEAWALLRAIKRAFDPNGIFNPGKLFR 457 (459)
T ss_pred HHHHHHH-HHHHHHhCCeeEEecccchh--------hHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCccCC
Confidence 2222455 37889999999999988766 566666666 999999999999999999987654
No 12
>KOG1231 consensus Proteins containing the FAD binding domain [Energy production and conversion]
Probab=99.26 E-value=1.4e-10 Score=110.81 Aligned_cols=48 Identities=23% Similarity=0.461 Sum_probs=46.0
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCCCCeEEEEEEEEEeEeccee
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGLGGLGVVAEVTLQCVERQEL 48 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~ 48 (366)
|+||+|+|+|++||+..|++||.++.||+|.|||||++|++|+|++..
T Consensus 194 LdVVtgkGeiv~cs~r~n~~lf~~vlGglGqfGIITrArI~le~aP~~ 241 (505)
T KOG1231|consen 194 LDVVTGKGEIVTCSKRANSNLFFLVLGGLGQFGIITRARIKLEPAPKR 241 (505)
T ss_pred EEEEcCCCcEEecccccCceeeeeeeccCcceeeEEEEEEEeccCCcc
Confidence 689999999999999999999999999999999999999999999854
No 13
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=98.78 E-value=1.7e-08 Score=97.07 Aligned_cols=69 Identities=19% Similarity=0.205 Sum_probs=56.5
Q ss_pred CEEEcCCCCEEEEcCC-----CChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEEE-EeccHHHHHHHHHHHHh
Q 017772 1 MKLVTPAKGTIEVSKE-----KDPDLFYLARCGLGGLGVVAEVTLQCVERQELVEHT-TVSNIKEIKKNHKKLLS 69 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~-----~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~ 69 (366)
+++|+++|++++++.. .++||||+++||+|+|||||++|||+.|.+....+. ...+.++.++.+.++..
T Consensus 120 ~~vV~~~Gei~~~gg~v~kn~~G~DL~~l~~Gs~GtLGVitevtlkl~P~p~~~~t~~~~~~~~~a~~~~~~~~~ 194 (352)
T PRK11282 120 TRLINGRGEHLRFGGQVMKNVAGYDVSRLMAGSLGTLGVLLEVSLKVLPRPRAELTLRLEMDAAEALRKLNEWGG 194 (352)
T ss_pred EEEEcCCceEEEeCCcccCCCCCchHHHHHhhCCchhhhheEEEEEEEecCceEEEEEEecCHHHHHHHHHHHhc
Confidence 5899999999999753 347999999999999999999999999998776553 34456777777776654
No 14
>KOG1262 consensus FAD-binding protein DIMINUTO [General function prediction only]
Probab=98.67 E-value=1.2e-06 Score=82.65 Aligned_cols=95 Identities=22% Similarity=0.296 Sum_probs=73.3
Q ss_pred CEEEcCCCCEEEEcCC-CChhhhHHhhcCCCCeEEEEEEEEEeEecceeE-EE-EEeccHHHHHHHHHHHHh---c---C
Q 017772 1 MKLVTPAKGTIEVSKE-KDPDLFYLARCGLGGLGVVAEVTLQCVERQELV-EH-TTVSNIKEIKKNHKKLLS---E---N 71 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~-~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~-~~-~~~~~~~~~~~~~~~~~~---~---~ 71 (366)
.|||+|||++++|+++ |+.|||.|+..|-|.+|..+.+||++.|..... .+ ..+..++++.+.+-++.. . +
T Consensus 183 YEvVladGelv~~t~dne~sdLfyaiPWSqGTlgfLVaatiriIkvK~Yvkltyip~~~l~e~c~k~~e~~~dsdkntk~ 262 (543)
T KOG1262|consen 183 YEVVLADGELVRVTPDNEHSDLFYAIPWSQGTLGFLVAATIRIIKVKKYVKLTYIPVHGLDEYCKKITELSGDSDKNTKN 262 (543)
T ss_pred eEEEecCCeEEEecCCcccCceEEEcccccCchheeeeeEEEEEeccceEEEEEEecccHHHHHHHHHhhcccccccccc
Confidence 3899999999999987 899999999999999999999999999986544 33 355678888776655332 1 2
Q ss_pred -CcEEEEEeccCCeEEEEEecCCCCC
Q 017772 72 -KHVKYLHIPYTDTVVVVTCNPVSKW 96 (366)
Q Consensus 72 -~~~~~~w~p~~~~~~~~~~~~~~~~ 96 (366)
+++|...+.. +.++++.++-++..
T Consensus 263 ~dfvE~liyn~-~egviMvG~fad~~ 287 (543)
T KOG1262|consen 263 ADFVEGLIYNK-NEGVIMVGNFADKV 287 (543)
T ss_pred cchhheeeecC-CccEEEEEeccCcc
Confidence 5677765544 56778888888744
No 15
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=98.39 E-value=1e-06 Score=89.15 Aligned_cols=69 Identities=17% Similarity=0.291 Sum_probs=56.6
Q ss_pred CEEEcCCCCEEEEcCC----CChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEE--EEeccHHHHHHHHHHHHh
Q 017772 1 MKLVTPAKGTIEVSKE----KDPDLFYLARCGLGGLGVVAEVTLQCVERQELVEH--TTVSNIKEIKKNHKKLLS 69 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~----~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 69 (366)
++||++||++++++.. .++||+|+++||.|+|||||++||++.|.+..... ....+.++..+.+.++..
T Consensus 182 levVl~~G~i~~~~~~~~~~~g~dl~~l~~Gs~GtlGIIt~atlkl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~ 256 (499)
T PRK11230 182 VEILTLDGEALTLGSDALDSPGFDLLALFTGSEGMLGVVTEVTVKLLPKPPVARVLLASFDSVEKAGLAVGDIIA 256 (499)
T ss_pred EEEEcCCCcEEEeCCccCCCCccchHhhhccCCCccEEEEEEEEEEEcCCcceEEEEEECCCHHHHHHHHHHHHh
Confidence 5899999999999853 36899999999999999999999999998765443 345677777777766554
No 16
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=98.30 E-value=2.1e-06 Score=87.60 Aligned_cols=69 Identities=23% Similarity=0.260 Sum_probs=54.1
Q ss_pred CEEEcCCCCEEEEcCC-----CChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEE--EEeccHHHHHHHHHHHHh
Q 017772 1 MKLVTPAKGTIEVSKE-----KDPDLFYLARCGLGGLGVVAEVTLQCVERQELVEH--TTVSNIKEIKKNHKKLLS 69 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~-----~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 69 (366)
+++|++||+++++... ..+||||+++||.|+|||||++||++.|.+..... ....++++..+...++..
T Consensus 258 levVl~dG~iv~~~~~~~k~~~g~dL~~l~~GseGtLGIIT~~tlrl~p~P~~~~~~~~~f~~~~~a~~av~~i~~ 333 (555)
T PLN02805 258 LKVVLPNGDVVKTASRARKSAAGYDLTRLVIGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPTIKDAADVAIATML 333 (555)
T ss_pred EEEEcCCceEEEecCccccCCCCccHHHHhccCCCceEEEEEEEEEeecCCcceEEEEEEcCCHHHHHHHHHHHHh
Confidence 5899999999987432 34799999999999999999999999997654433 345567777776666544
No 17
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=98.10 E-value=1e-05 Score=80.22 Aligned_cols=69 Identities=20% Similarity=0.274 Sum_probs=55.6
Q ss_pred CEEEcCCCCEEEEcCCC-----ChhhhHHhhcCCCCeEEEEEEEEEeEecceeEEE--EEeccHHHHHHHHHHHHh
Q 017772 1 MKLVTPAKGTIEVSKEK-----DPDLFYLARCGLGGLGVVAEVTLQCVERQELVEH--TTVSNIKEIKKNHKKLLS 69 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~-----~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 69 (366)
+++|+++|++++++... .+||+++..||.|+|||||++||++.|.+..... ....++++.++.+..+..
T Consensus 124 l~vV~~~G~~~~~~~~~~~~~~g~dl~~l~~Gs~GtlGiit~~~lkl~p~p~~~~~~~~~f~~~~~~~~~~~~~~~ 199 (413)
T TIGR00387 124 LEVVTADGEILRIGGKTAKDVAGYDLTGLFVGSEGTLGIVTEATLKLLPKPENIVVALAFFDSIEKAMQAVYDIIA 199 (413)
T ss_pred EEEEeCCCCEEEeCCcccCCCCCCChhhhcccCCccceEEEEEEEEeecCCCccEEEEEECCCHHHHHHHHHHHHh
Confidence 58999999999997532 4589999999999999999999999998765433 355678888877766554
No 18
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.92 E-value=0.00075 Score=63.92 Aligned_cols=42 Identities=14% Similarity=0.011 Sum_probs=37.5
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCCCC--eEEEEEEEEEeEec
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGLGG--LGVVAEVTLQCVER 45 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~lG~--lGVit~vtl~~~p~ 45 (366)
+++|+++|+++++++ .|++|+.|+|.+. +||||++||++.|.
T Consensus 149 v~vv~~~G~~~~~~~---~e~~~~yR~s~~~~~~gII~~~~l~l~~~ 192 (298)
T PRK13905 149 VEVLDRDGEIKTLSN---EELGFGYRHSALQEEGLIVLSATFQLEPG 192 (298)
T ss_pred EEEEeCCCCEEEEEH---HHcCCcCccccCCCCCEEEEEEEEEEcCC
Confidence 479999999999974 5999999998765 89999999999987
No 19
>KOG1233 consensus Alkyl-dihydroxyacetonephosphate synthase [General function prediction only]
Probab=95.13 E-value=0.022 Score=54.43 Aligned_cols=68 Identities=21% Similarity=0.279 Sum_probs=49.6
Q ss_pred CEEEcCCCCEE-EEcC---CCChhhhHHhhcCCCCeEEEEEEEEEeEecceeEE--EEEeccHHHHHHHHHHHH
Q 017772 1 MKLVTPAKGTI-EVSK---EKDPDLFYLARCGLGGLGVVAEVTLQCVERQELVE--HTTVSNIKEIKKNHKKLL 68 (366)
Q Consensus 1 ~~lV~~~G~i~-~~s~---~~~~dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~--~~~~~~~~~~~~~~~~~~ 68 (366)
+.+|++.|-|- .|+. +..||.-.-..||=|.|||||+|||++.|.+.+++ .....+++.-..-+.+..
T Consensus 291 ~~mVtP~Giiek~Cq~PRmS~GPDihh~IlGSEGTLGVitEvtiKirPiPe~~ryGS~aFPNFEqGV~f~REvA 364 (613)
T KOG1233|consen 291 LNMVTPKGIIEKQCQVPRMSSGPDIHHIILGSEGTLGVITEVTIKIRPIPEVKRYGSFAFPNFEQGVNFFREVA 364 (613)
T ss_pred EEeecCcchhhhhhcCCcccCCCCcceEEeccCcceeEEEEEEEEEeechhhhhcCccccCcHHHHHHHHHHHH
Confidence 46899999653 2332 35789777788999999999999999999877664 345567776665555544
No 20
>PF09265 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and cytokinin binding; InterPro: IPR015345 This domain adopts an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. It is predominantly found in plant cytokinin dehydrogenase 1, where it is capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin []. ; GO: 0019139 cytokinin dehydrogenase activity, 0050660 flavin adenine dinucleotide binding, 0009690 cytokinin metabolic process, 0055114 oxidation-reduction process; PDB: 2EXR_A 2Q4W_A 3S1E_A 1W1Q_A 2QPM_A 3C0P_A 3BW7_A 3S1C_A 1W1S_A 2QKN_A ....
Probab=94.87 E-value=0.049 Score=50.72 Aligned_cols=124 Identities=18% Similarity=0.250 Sum_probs=62.1
Q ss_pred ccccccccHHHHHHHHHHHHHhCCCCCCCceEEEeecCCC--CCccCCCCCCCCCceeEEEEEEee-cCCchhhhhhhhH
Q 017772 211 TLAKLSMKDLEYIEELKQLIEKEDIPAPAPIEQRWTARSQ--SVMSPAYSSVQDDIFSWVGIIMYL-PTMDARQRKEITD 287 (366)
Q Consensus 211 e~~vP~~~~~~~l~~i~~~i~~~~~~~~~~i~vRf~~~d~--~~LSp~~~~~~d~~~~~i~v~~y~-p~~~~~~~~~~~~ 287 (366)
..+||.++..++.+.+.+-|-+.. ....||.+.-...+. .-+|... .+++ ++.-+++.... |.... +..+
T Consensus 145 nlfvP~s~i~dF~~~V~~~il~~~-~~~GpiLvYP~~~~kwd~~~s~v~-Pde~-vfylv~lLrsa~P~~~~----~~l~ 217 (281)
T PF09265_consen 145 NLFVPKSRIEDFDRGVFKGILKDD-GNSGPILVYPLNRSKWDTRMSAVI-PDED-VFYLVALLRSADPSDGP----DDLE 217 (281)
T ss_dssp EEEEEHHHHHHHHHHCCCCCTTTS--S-SEEEEEEEEGGGS-TTSS-----SSS-EEEEEEEEE---TTSSC----CHHH
T ss_pred eeecchHHHHHHHHHHHHHhhccC-CCCceEEEEEecccccCCCCcccC-CCCC-eEEEEEEeCCCCCCCCc----hhHH
Confidence 568999998888888766552222 233588887666543 3444221 1112 22225554421 22111 1112
Q ss_pred HHHhh-HHHHHHHHHh--hcCCccccccccCCCchHHHHHHHHHHHhcCC--hhHHHHHHHhcCCCCCCCc
Q 017772 288 EFFNY-RHLSQKQLWD--QYSAYEHWAKIEVPKDKEELAALQARLRKRFP--VDSYNKARKELDPNRILSN 353 (366)
Q Consensus 288 ~~~~~-~~~~e~~~~~--~~gGRpHWgK~~~~~~~~~~~~~~~~~~~~YP--~~~F~~~r~~lDP~g~F~N 353 (366)
....- .+++ +.+. ..||+.+..-. .+ .++-++.|+ |++|.+.|+++||.+++.-
T Consensus 218 ~l~~qN~~il--~~c~~agi~~k~Yl~~~--~t--------~~dW~~HFG~~W~~f~~~K~~yDP~~IL~P 276 (281)
T PF09265_consen 218 RLLEQNRRIL--EFCRKAGIGGKQYLPHY--TT--------QEDWRRHFGPKWERFVERKRRYDPKAILAP 276 (281)
T ss_dssp HHHHHHHHHH--HHHHHTT--EEESS-----SS--------HHHHHHHHGHHHHHHHHHHHHH-TT--B-G
T ss_pred HHHHHHHHHH--HHHHHcCCceEECCCCC--CC--------HHHHHHHhchHHHHHHHHHHhCCchhhcCC
Confidence 22211 1322 3443 34466655532 44 778889998 9999999999999998763
No 21
>PF08031 BBE: Berberine and berberine like ; InterPro: IPR012951 This domain is found in the berberine bridge and berberine bridge-like enzymes, which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyse the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine [].; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 2IPI_A 2Y3S_A 2Y3R_D 2Y08_B 2Y4G_A 3D2H_A 3FW9_A 3FW8_A 3FWA_A 3D2J_A ....
Probab=94.72 E-value=0.02 Score=38.30 Aligned_cols=26 Identities=12% Similarity=0.321 Sum_probs=19.2
Q ss_pred HHhcCC--hhHHHHHHHhcCCCCCCCcc
Q 017772 329 LRKRFP--VDSYNKARKELDPNRILSNN 354 (366)
Q Consensus 329 ~~~~YP--~~~F~~~r~~lDP~g~F~N~ 354 (366)
....|+ +++..++++++||+++|.++
T Consensus 16 ~~~yyg~n~~rL~~iK~~yDP~n~F~~~ 43 (47)
T PF08031_consen 16 QEAYYGENYDRLRAIKRKYDPDNVFRFP 43 (47)
T ss_dssp HHHHHGGGHHHHHHHHHHH-TT-TS-ST
T ss_pred HHHHhchhHHHHHHHHHHhCccceeCCC
Confidence 444566 99999999999999999876
No 22
>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. The region around the histidine that binds the FAD group is conserved in these enzymes (see IPR006093 from INTERPRO).; GO: 0003824 catalytic activity, 0050660 flavin adenine dinucleotide binding; PDB: 1WVE_B 1DII_B 1WVF_A 1DIQ_A 2UUU_B 2UUV_A 1W1M_A 1E8H_B 1E0Y_B 1DZN_B ....
Probab=94.14 E-value=0.15 Score=45.97 Aligned_cols=106 Identities=15% Similarity=0.272 Sum_probs=59.1
Q ss_pred ccccccccHHHHHHHHHHHHHhCCCCCCCceEEEeecCCCCCccCCCCCCCCCceeEEEEEEeecCCchhhhhhhhHHHH
Q 017772 211 TLAKLSMKDLEYIEELKQLIEKEDIPAPAPIEQRWTARSQSVMSPAYSSVQDDIFSWVGIIMYLPTMDARQRKEITDEFF 290 (366)
Q Consensus 211 e~~vP~~~~~~~l~~i~~~i~~~~~~~~~~i~vRf~~~d~~~LSp~~~~~~d~~~~~i~v~~y~p~~~~~~~~~~~~~~~ 290 (366)
+.+||.++..++++++++.+++.+. ....|+-..+ + ..+ +.+.+ +..+.... ...+.+.
T Consensus 132 dv~vp~~~l~~~~~~~~~~~~~~~~-----~~~~~gH~~~--------g----~~h-~~~~~--~~~~~~~~-~~~~~~~ 190 (248)
T PF02913_consen 132 DVAVPPSRLPEFLREIRALLREYGL-----EVCHFGHAGD--------G----NLH-LYILF--DPRDPEEP-ERAEALW 190 (248)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHCTE-----EEEEEEEEEE--------C----EEE-EEEEE--ETTSHHHH-HHHHHHH
T ss_pred eecccchhhhhHHHhhhhhhhhccc-----cccceEEccC--------C----eEE-EEeec--ccchHHHH-HHHHHHH
Confidence 6799999999999999999998861 1222322211 1 112 22222 22221111 1112333
Q ss_pred hhHHHHHHHHHhhcCCccc----cccccCCCchHHHHHHHHHHHhcCC---hhHHHHHHHhcCCCCCCC
Q 017772 291 NYRHLSQKQLWDQYSAYEH----WAKIEVPKDKEELAALQARLRKRFP---VDSYNKARKELDPNRILS 352 (366)
Q Consensus 291 ~~~~~~e~~~~~~~gGRpH----WgK~~~~~~~~~~~~~~~~~~~~YP---~~~F~~~r~~lDP~g~F~ 352 (366)
. ++. +.+.++||-+- .|+.. ...+...++ +.-+.++|+.+||+|++.
T Consensus 191 ~--~~~--~~~~~~gG~is~eHG~G~~k-----------~~~~~~~~~~~~~~~~~~iK~~~DP~~ilN 244 (248)
T PF02913_consen 191 D--ELY--ELVLELGGSISAEHGIGKLK-----------KPYLEEEYGPAALRLMRAIKQAFDPNGILN 244 (248)
T ss_dssp H--HHH--HHHHHTT-BBSSSSGGGHHH-----------HHHHCHHCHHHHHHHHHHHHHHH-TTS-BS
T ss_pred H--HHH--HHHHhcccccccccchhhhh-----------HHHHHHhcchHHHHHHHHhhhccCCccCCC
Confidence 2 332 57889999652 22222 234555665 888999999999999985
No 23
>KOG1232 consensus Proteins containing the FAD binding domain [Energy production and conversion]
Probab=92.83 E-value=0.21 Score=47.91 Aligned_cols=63 Identities=21% Similarity=0.362 Sum_probs=46.0
Q ss_pred CEEEcCCCCEEEEc---CCCCh--hhhHHhhcCCCCeEEEEEEEEEeEecceeEEE--EEeccHHHHHHH
Q 017772 1 MKLVTPAKGTIEVS---KEKDP--DLFYLARCGLGGLGVVAEVTLQCVERQELVEH--TTVSNIKEIKKN 63 (366)
Q Consensus 1 ~~lV~~~G~i~~~s---~~~~~--dLf~A~~~~lG~lGVit~vtl~~~p~~~~~~~--~~~~~~~~~~~~ 63 (366)
+|+|+|+|+|+..- +.+|. |+=.-.+||=|.+||||.|++-+.|.++-... ....+++++.+.
T Consensus 216 le~Vlp~G~vl~~~~slRKDNTgydlkhLFIGSEGtlGVvT~vSil~~~kpksvn~af~gi~sf~~v~k~ 285 (511)
T KOG1232|consen 216 LEVVLPNGTVLDLLSSLRKDNTGYDLKHLFIGSEGTLGVVTKVSILAPPKPKSVNVAFIGIESFDDVQKV 285 (511)
T ss_pred eEEEcCCCchhhhhhhhcccCccccchhheecCCceeeEEeeEEEeecCCCcceeEEEEccccHHHHHHH
Confidence 58999999988652 23343 66677789999999999999999997654432 234567766654
No 24
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=90.71 E-value=0.91 Score=45.04 Aligned_cols=110 Identities=13% Similarity=0.077 Sum_probs=60.3
Q ss_pred ccccccccHHHHHHHHHHHHHhCCCCCCCceEEEeecCCCCCccCCCCCCCCCceeEEEEEEeecCCchhhhhhhhHHHH
Q 017772 211 TLAKLSMKDLEYIEELKQLIEKEDIPAPAPIEQRWTARSQSVMSPAYSSVQDDIFSWVGIIMYLPTMDARQRKEITDEFF 290 (366)
Q Consensus 211 e~~vP~~~~~~~l~~i~~~i~~~~~~~~~~i~vRf~~~d~~~LSp~~~~~~d~~~~~i~v~~y~p~~~~~~~~~~~~~~~ 290 (366)
+.+||.++..++++++++.+++.+... .+ |+-..++.|. +.+. | +..+.. . .+++.
T Consensus 298 d~~vp~~~l~~~~~~~~~~~~~~~~~~----~~-~gH~g~g~lh-------------~~~~-~-~~~~~~---~-~~~~~ 353 (413)
T TIGR00387 298 DGTVPRSKLPEALRGIADIARKYDFTI----AN-FGHAGDGNLH-------------PTIL-T-DPEDKG---E-MERVE 353 (413)
T ss_pred EEecCHHHHHHHHHHHHHHHHHcCCeE----EE-EEEecCCccc-------------cccC-C-CCCCHH---H-HHHHH
Confidence 579999999999999999998876431 12 2222232221 1111 1 111110 0 11222
Q ss_pred hhHHHHHHHHHhhcCCccccccccCCCchHHHHHHHHHHHhcCC---hhHHHHHHHhcCCCCCCC
Q 017772 291 NYRHLSQKQLWDQYSAYEHWAKIEVPKDKEELAALQARLRKRFP---VDSYNKARKELDPNRILS 352 (366)
Q Consensus 291 ~~~~~~e~~~~~~~gGRpHWgK~~~~~~~~~~~~~~~~~~~~YP---~~~F~~~r~~lDP~g~F~ 352 (366)
...+.+ -+.+.++||.. .+ .|.. +... ...+...|+ ++-+.++|+.+||+|++.
T Consensus 354 ~~~~~~-~~~~~~~gG~i-s~-eHG~-G~~r----~~~~~~~~~~~~~~~~~~iK~~fDP~~ilN 410 (413)
T TIGR00387 354 EAGGEI-FELAIELGGTI-SG-EHGI-GVVK----AEFMPYKFNEKELETMRAIKKAFDPDNILN 410 (413)
T ss_pred HHHHHH-HHHHHHcCCEE-EE-eccC-cHhH----HHHHHHhcCHHHHHHHHHHHHHcCcCcCCC
Confidence 111223 25678999853 00 0111 1110 234556666 888999999999999985
No 25
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=90.68 E-value=2 Score=43.81 Aligned_cols=108 Identities=11% Similarity=0.170 Sum_probs=63.5
Q ss_pred ccccccccHHHHHHHHHHHHHhCCCCCCCceEEEeecCCCCCccCCCCCCCCCceeEEEEEEeecCCchhhhhhhhHHHH
Q 017772 211 TLAKLSMKDLEYIEELKQLIEKEDIPAPAPIEQRWTARSQSVMSPAYSSVQDDIFSWVGIIMYLPTMDARQRKEITDEFF 290 (366)
Q Consensus 211 e~~vP~~~~~~~l~~i~~~i~~~~~~~~~~i~vRf~~~d~~~LSp~~~~~~d~~~~~i~v~~y~p~~~~~~~~~~~~~~~ 290 (366)
+.+||.++..+++++++++.++.+.. +.+.+..++- - +.+.+ ++ +..+... ....+++.
T Consensus 355 dv~vP~~~l~~~~~~~~~~~~~~~~~----~~~~gH~GdG-n-------------~H~~i-~~-~~~~~~~-~~~~~~~~ 413 (499)
T PRK11230 355 DGTIPRRELPGVLEGIARLSQQYGLR----VANVFHAGDG-N-------------MHPLI-LF-DANEPGE-LERAEALG 413 (499)
T ss_pred eecCChHHHHHHHHHHHHHHHHcCCe----EEEEEEeCCC-c-------------ceeee-cC-CCCCHHH-HHHHHHHH
Confidence 67999999999999999999887532 3333333321 1 11222 22 2111110 01112333
Q ss_pred hhHHHHHHHHHhhcCCc---ccc-ccccCCCchHHHHHHHHHHHhcCC---hhHHHHHHHhcCCCCCCCcc
Q 017772 291 NYRHLSQKQLWDQYSAY---EHW-AKIEVPKDKEELAALQARLRKRFP---VDSYNKARKELDPNRILSNN 354 (366)
Q Consensus 291 ~~~~~~e~~~~~~~gGR---pHW-gK~~~~~~~~~~~~~~~~~~~~YP---~~~F~~~r~~lDP~g~F~N~ 354 (366)
. +++ +.+.++||. -|= |+.. .+.+...|+ +.-+.++|+.+||+|++.-.
T Consensus 414 ~--~l~--~~~~~~GG~is~EHGiG~~k-----------~~~l~~~~g~~~~~~m~~IK~~fDP~~iLNPG 469 (499)
T PRK11230 414 G--KIL--ELCVEVGGSITGEHGVGREK-----------INQMCAQFNSDEITLFHAVKAAFDPDGLLNPG 469 (499)
T ss_pred H--HHH--HHHHHcCCeEeeeccCchhh-----------HHHHHHhcCHHHHHHHHHHHHHcCCCcCCCCC
Confidence 2 433 577899996 221 1111 345667775 89999999999999998643
No 26
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=89.80 E-value=2.8 Score=43.22 Aligned_cols=108 Identities=15% Similarity=0.178 Sum_probs=62.3
Q ss_pred ccccccccHHHHHHHHHHHHHhCCCCCCCceEEEeecCCCCCccCCCCCCCCCceeEEEEEEeecCCchhhhhhhhHHHH
Q 017772 211 TLAKLSMKDLEYIEELKQLIEKEDIPAPAPIEQRWTARSQSVMSPAYSSVQDDIFSWVGIIMYLPTMDARQRKEITDEFF 290 (366)
Q Consensus 211 e~~vP~~~~~~~l~~i~~~i~~~~~~~~~~i~vRf~~~d~~~LSp~~~~~~d~~~~~i~v~~y~p~~~~~~~~~~~~~~~ 290 (366)
+++||+++..++++++++++++.+... .-|+-..++- +. +.+ .+.+ .+.... ...+++.
T Consensus 432 DvaVP~s~L~e~i~~~~~~~~~~~~~~-----~~~gHaGdGn------------lH-~~i-~~~~-~~~~~~-~~~~~~~ 490 (555)
T PLN02805 432 DVCVPLSHLAELISRSKKELDASPLVC-----TVIAHAGDGN------------FH-TII-LFDP-SQEDQR-REAERLN 490 (555)
T ss_pred EEEEEHHHHHHHHHHHHHHHHHcCCeE-----EEEEEcCCCc------------EE-EEe-ccCC-CCHHHH-HHHHHHH
Confidence 579999999999999999999876331 1122222211 11 222 2212 111110 1112333
Q ss_pred hhHHHHHHHHHhhcCCc--cccccccCCCchHHHHHHHHHHHhcCC---hhHHHHHHHhcCCCCCCC
Q 017772 291 NYRHLSQKQLWDQYSAY--EHWAKIEVPKDKEELAALQARLRKRFP---VDSYNKARKELDPNRILS 352 (366)
Q Consensus 291 ~~~~~~e~~~~~~~gGR--pHWgK~~~~~~~~~~~~~~~~~~~~YP---~~~F~~~r~~lDP~g~F~ 352 (366)
+ + + -+.+.++||- -|-|- +..- .+.+...|+ ++-+.++|+.+||+|++.
T Consensus 491 ~--~-i-~~~~~~~gGsiSgEHGi-----G~~k----~~~l~~~~g~~~~~lm~~IK~a~DP~gILN 544 (555)
T PLN02805 491 H--F-M-VHTALSMEGTCTGEHGV-----GTGK----MKYLEKELGIEALQTMKRIKKALDPNNIMN 544 (555)
T ss_pred H--H-H-HHHHHHcCCeEeEECCC-----ChhH----HHHHHHhcCHHHHHHHHHHHHHhCcCcCCC
Confidence 2 3 3 2577899993 22221 1110 456777886 899999999999999874
No 27
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=89.03 E-value=0.83 Score=43.35 Aligned_cols=41 Identities=20% Similarity=0.077 Sum_probs=32.6
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCC-CCeEEEEEEEEEeEec
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGL-GGLGVVAEVTLQCVER 45 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~l-G~lGVit~vtl~~~p~ 45 (366)
+++|+++| +++++ ..|+.|+.|.|. +.-||||++||++.|.
T Consensus 154 v~vv~~~G-~~~~~---~~e~~f~YR~s~~~~~~II~~a~~~L~~~ 195 (302)
T PRK14652 154 VELATADG-AGFVP---AAALGYAYRTCRLPPGAVITRVEVRLRPG 195 (302)
T ss_pred EEEECCCC-cEEee---hhhcCcccceeccCCCeEEEEEEEEEecC
Confidence 47899999 66665 368999999864 4348999999999884
No 28
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=86.53 E-value=0.73 Score=44.81 Aligned_cols=43 Identities=23% Similarity=0.169 Sum_probs=35.3
Q ss_pred CEEEcC-CCCEEEEcCCCChhhhHHhhcCC--C-CeEEEEEEEEEeEecc
Q 017772 1 MKLVTP-AKGTIEVSKEKDPDLFYLARCGL--G-GLGVVAEVTLQCVERQ 46 (366)
Q Consensus 1 ~~lV~~-~G~i~~~s~~~~~dLf~A~~~~l--G-~lGVit~vtl~~~p~~ 46 (366)
+++++. +|++++++ +.|++|+.|.|. + ..+||++++|++.|..
T Consensus 151 V~vvd~~~G~~~~~~---~~el~f~YR~S~f~~~~~~IIl~a~f~L~~~~ 197 (363)
T PRK13903 151 VRLLDRRTGEVRWVP---AADLGFGYRTSVLKHSDRAVVLEVEFQLDPSG 197 (363)
T ss_pred EEEEECCCCEEEEEE---HHHcceeccccccCCCCCEEEEEEEEEEEcCC
Confidence 367885 49999987 579999999973 3 3789999999998863
No 29
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=85.92 E-value=1.8 Score=41.10 Aligned_cols=41 Identities=12% Similarity=0.079 Sum_probs=34.0
Q ss_pred EEEcCCCCEEEEcCCCChhhhHHhhcC-C-CCeEEEEEEEEEeEec
Q 017772 2 KLVTPAKGTIEVSKEKDPDLFYLARCG-L-GGLGVVAEVTLQCVER 45 (366)
Q Consensus 2 ~lV~~~G~i~~~s~~~~~dLf~A~~~~-l-G~lGVit~vtl~~~p~ 45 (366)
++|+++|+++++++ .|+.++.|.| + ..-.||++++|++.+.
T Consensus 155 ~vv~~~G~v~~~~~---~e~~f~YR~s~~~~~~~iil~a~~~l~~~ 197 (305)
T PRK12436 155 VVMTGDGELRTLTK---EAFEFGYRKSVFANNHYIILEARFELEEG 197 (305)
T ss_pred EEEeCCCCEEEEEH---HHhcCcCCCCcCCCCCEEEEEEEEEEcCC
Confidence 57789999999985 5799999987 3 2357999999999775
No 30
>PRK11183 D-lactate dehydrogenase; Provisional
Probab=83.77 E-value=3.9 Score=41.77 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=35.2
Q ss_pred hhhHHh--hcCCCCeEEEEEEEEEeEecceeEEEE--EeccHHHHHHHHHHHHhc
Q 017772 20 DLFYLA--RCGLGGLGVVAEVTLQCVERQELVEHT--TVSNIKEIKKNHKKLLSE 70 (366)
Q Consensus 20 dLf~A~--~~~lG~lGVit~vtl~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~ 70 (366)
|+-... .||=|.|||| +|+|++.|.+.-.... .+.+.+++.+....++..
T Consensus 239 Dl~~LfeasGseGkLgV~-avrLdtfp~p~~~~vf~ig~n~~~~~~~~rr~il~~ 292 (564)
T PRK11183 239 DPRRLFEASGCAGKLAVF-AVRLDTFPAEKNTQVFYIGTNDPAVLTEIRRHILAN 292 (564)
T ss_pred CHHHHhhccCCCceEEEE-EEEeccccCCCcceEEEEeCCCHHHHHHHHHHHHHh
Confidence 554555 7899999999 9999999987655443 345667666655555543
No 31
>PF03392 OS-D: Insect pheromone-binding family, A10/OS-D; InterPro: IPR005055 A class of small (14-20 Kd) water-soluble proteins, called odorant binding proteins (OBPs), first discovered in the insect sensillar lymph but also in the mucus of vertebrates, is postulated to mediate the solubilisation of hydrophobic odorant molecules, and thereby to facilitate their transport to the receptor neurons. The product of a gene expressed in the olfactory system of Drosophila melanogaster (Fruit fly), OS-D, shares features common to vertebrate odorant-binding proteins, but has a primary structure unlike odorant-binding proteins []. OS-D derivatives have subsequently been found in chemosensory organs of phylogenetically distinct insects, including cockroaches, phasmids and moths, suggesting that OS-D-like proteins seem to be conserved in the insect phylum.; PDB: 1KX9_A 1N8U_A 1KX8_A 1K19_A 1N8V_A 2GVS_A 2JNT_A.
Probab=65.92 E-value=4 Score=31.66 Aligned_cols=29 Identities=24% Similarity=0.495 Sum_probs=20.0
Q ss_pred HHHHHHhcCChhHHHHHHHhcCCCCCCCcc
Q 017772 325 LQARLRKRFPVDSYNKARKELDPNRILSNN 354 (366)
Q Consensus 325 ~~~~~~~~YP~~~F~~~r~~lDP~g~F~N~ 354 (366)
+...+.+.+| ++|.++++++||+|.+...
T Consensus 66 v~~~l~~~~P-~~w~~l~~KyDp~~~y~~k 94 (95)
T PF03392_consen 66 VIKFLKKNYP-DEWEELVKKYDPEGKYRKK 94 (95)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHTTT-TTHHH
T ss_pred HHHHHHHcCH-HHHHHHHHHHCCCcchhhc
Confidence 3455667777 5566777999999987644
No 32
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=55.36 E-value=11 Score=35.71 Aligned_cols=41 Identities=17% Similarity=0.049 Sum_probs=32.7
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCCCC--eEEEEEEEEEeEe
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGLGG--LGVVAEVTLQCVE 44 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~lG~--lGVit~vtl~~~p 44 (366)
+++|+++|+++++++ .|+.++.|.|.=. --||++++|++.|
T Consensus 154 v~vv~~~G~~~~~~~---~e~~f~YR~S~~~~~~~ii~~~~~~l~~ 196 (307)
T PRK13906 154 ALCVNEQGSLIKLTT---KELELDYRNSIIQKEHLVVLEAAFTLAP 196 (307)
T ss_pred EEEEeCCCCEEEEEH---HHccCcCCcccCCCCCEEEEEEEEEECC
Confidence 478999999999975 4677888876422 2499999999976
No 33
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase. This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan.
Probab=52.05 E-value=32 Score=32.23 Aligned_cols=44 Identities=14% Similarity=0.102 Sum_probs=34.7
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCC--CC-eEEEEEEEEEeEecce
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGL--GG-LGVVAEVTLQCVERQE 47 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~l--G~-lGVit~vtl~~~p~~~ 47 (366)
+++|+++|++++++. .|+-++.|-|. .. ..||+++++++.+.|.
T Consensus 131 v~vv~~~G~~~~~~~---~~~~f~YR~S~f~~~~~~iil~a~~~l~~~~~ 177 (284)
T TIGR00179 131 ATILLATGKTEWLTN---EQLGFGYRTSIFQHKYVGLVLKAEFQLTLGFG 177 (284)
T ss_pred EEEEeCCCCEEEEEH---HHccccCCccccCCCCcEEEEEEEEEeccccc
Confidence 478999999999974 57888888764 11 3799999999977665
No 34
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=43.17 E-value=30 Score=32.61 Aligned_cols=42 Identities=14% Similarity=0.058 Sum_probs=34.2
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCC-C-CeEEEEEEEEEeEec
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGL-G-GLGVVAEVTLQCVER 45 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~l-G-~lGVit~vtl~~~p~ 45 (366)
+++++.+|+++++++ .||-++.|-|. = .-.||++|+|++.|.
T Consensus 140 v~~ld~~G~~~~l~~---~el~f~YR~S~f~~~~~vvl~v~f~L~~~ 183 (291)
T COG0812 140 VEVLDRDGEVRWLSA---EELGFGYRTSPFKKEYLVVLSVEFKLTKG 183 (291)
T ss_pred EEEEcCCCCEEEEEH---HHhCcccccCcCCCCCEEEEEEEEEeCCC
Confidence 378999999999984 58888988774 2 228999999999876
No 35
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=40.32 E-value=23 Score=33.41 Aligned_cols=42 Identities=17% Similarity=0.073 Sum_probs=33.0
Q ss_pred CEEEcCCCCEEEEcCCCChhhhHHhhcCC--CC--------eEEEEEEEEEeEec
Q 017772 1 MKLVTPAKGTIEVSKEKDPDLFYLARCGL--GG--------LGVVAEVTLQCVER 45 (366)
Q Consensus 1 ~~lV~~~G~i~~~s~~~~~dLf~A~~~~l--G~--------lGVit~vtl~~~p~ 45 (366)
+++++.+|+++++++ .|++++.|.|. .. --||++++|++.+.
T Consensus 141 V~~~~~~g~~~~~~~---~el~f~YR~S~~~~~~~~~~~~~~~ii~~~~~~l~~~ 192 (295)
T PRK14649 141 AWLLLNGSECVEWSV---HDFAYGYRTSVLKQLRADGITWRPPLVLAARFRLHRD 192 (295)
T ss_pred EEEEeCCCCEEEEeH---HHcCcccceeecccccccccccCCeEEEEEEEEECCC
Confidence 368899999999975 49999999873 11 13999999999775
No 36
>cd06397 PB1_UP1 Uncharacterized protein 1. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions.
Probab=37.39 E-value=56 Score=24.45 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=26.8
Q ss_pred EEEcCCCCEEEEcCCCChhhhHHhhcCCCCeEEEEEEE
Q 017772 2 KLVTPAKGTIEVSKEKDPDLFYLARCGLGGLGVVAEVT 39 (366)
Q Consensus 2 ~lV~~~G~i~~~s~~~~~dLf~A~~~~lG~lGVit~vt 39 (366)
+-++-||.+++++. +.||..+.+-+--..|+|.++.
T Consensus 43 tYiDeD~D~ITlss--d~eL~d~~~~~~~~~~~v~k~~ 78 (82)
T cd06397 43 TYIDNDNDEITLSS--NKELQDFYRLSHRESTEVIKLN 78 (82)
T ss_pred EEEcCCCCEEEecc--hHHHHHHHHhcccccCceeEee
Confidence 45788999999974 6799899886555577766543
No 37
>PF08077 Cm_res_leader: Chloramphenicol resistance gene leader peptide; InterPro: IPR012537 This family consists of chloramphenicol (Cm) resistance gene leader peptides. Inducible resistance to Cm in both Gram-positive and Gram-negative bacteria is controlled by translation attenuation. In translation attenuation, the ribosome-binding-site (RBS) for the resistance determinant is sequestered in a secondary structure domain within the mRNA. Preceding the secondary structure is a short, translated ORF termed the leader. Ribosome stalling in the leader causes the destabilisation of the downstream secondary structure, allowing initiation of translation of the Cm resistance gene [].
Probab=32.27 E-value=46 Score=16.57 Aligned_cols=12 Identities=42% Similarity=0.567 Sum_probs=9.9
Q ss_pred CCCeEEEEEEEE
Q 017772 29 LGGLGVVAEVTL 40 (366)
Q Consensus 29 lG~lGVit~vtl 40 (366)
-|.+.|||+-|+
T Consensus 5 pgalavvtrrti 16 (17)
T PF08077_consen 5 PGALAVVTRRTI 16 (17)
T ss_pred CceEEEEEEeec
Confidence 488999998876
No 38
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=30.09 E-value=60 Score=30.70 Aligned_cols=40 Identities=15% Similarity=0.156 Sum_probs=28.5
Q ss_pred EEEcCCCCEEEEcCCCChhhhHHhhcC-CCC--eEEEEEEEEEeEec
Q 017772 2 KLVTPAKGTIEVSKEKDPDLFYLARCG-LGG--LGVVAEVTLQCVER 45 (366)
Q Consensus 2 ~lV~~~G~i~~~s~~~~~dLf~A~~~~-lG~--lGVit~vtl~~~p~ 45 (366)
++++ +|++++.+++ |+-++.|-| ++. --||++++|++.|.
T Consensus 151 ~~~d-~g~v~~~~~~---e~~f~YR~S~~~~~~~~iI~~a~f~L~~~ 193 (297)
T PRK14653 151 VAYD-GKKIIRLGKN---EIKFSYRNSIFKEEKDLIILRVTFKLKKG 193 (297)
T ss_pred EEEC-CCEEEEEchh---hccccCccccCCCCCcEEEEEEEEEEecC
Confidence 5677 6889988753 666777754 332 23999999999774
No 39
>PF11094 UL11: Membrane-associated tegument protein; InterPro: IPR024351 The UL11 gene product of herpes simplex virus is a membrane-associated tegument protein that is incorporated into the HSV virion and functions in viral envelopment []. UL11 is acylated, which is crucial for lipid raft association [].
Probab=22.96 E-value=61 Score=20.65 Aligned_cols=16 Identities=31% Similarity=0.393 Sum_probs=13.3
Q ss_pred EEEcCCCCEEEEcCCC
Q 017772 2 KLVTPAKGTIEVSKEK 17 (366)
Q Consensus 2 ~lV~~~G~i~~~s~~~ 17 (366)
+|||-+|+++.+++++
T Consensus 17 ~LvT~~Ge~vsL~a~~ 32 (39)
T PF11094_consen 17 VLVTHSGETVSLDAEE 32 (39)
T ss_pred EEEccCCeEEEeChhh
Confidence 5899999999997653
No 40
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=22.02 E-value=90 Score=30.07 Aligned_cols=42 Identities=10% Similarity=0.068 Sum_probs=32.5
Q ss_pred CEEEcCC-CCEEEEcCCCChhhhHHhhcCC-CC----eEEEEEEEEEeEec
Q 017772 1 MKLVTPA-KGTIEVSKEKDPDLFYLARCGL-GG----LGVVAEVTLQCVER 45 (366)
Q Consensus 1 ~~lV~~~-G~i~~~s~~~~~dLf~A~~~~l-G~----lGVit~vtl~~~p~ 45 (366)
+++++.+ |+++++++ .|+.++.|-|. -. =-||++++|++.|.
T Consensus 141 V~v~d~~~g~~~~~~~---~e~~f~YR~S~f~~~~~~~~iVl~a~f~L~~~ 188 (334)
T PRK00046 141 VEALDLATGEFVRLSA---AECRFGYRDSIFKHEYPDRYAITAVGFRLPKQ 188 (334)
T ss_pred EEEEECCCCcEEEEEH---HHcCcccccccCCCCCcCCEEEEEEEEEecCC
Confidence 3678877 99999974 58888888763 21 23999999999885
No 41
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=21.87 E-value=1.9e+02 Score=27.05 Aligned_cols=40 Identities=23% Similarity=0.103 Sum_probs=30.5
Q ss_pred EEEcCCCCEEEEcCCCChhhhHHhhcCC-CCeEEEEEEEEEeEec
Q 017772 2 KLVTPAKGTIEVSKEKDPDLFYLARCGL-GGLGVVAEVTLQCVER 45 (366)
Q Consensus 2 ~lV~~~G~i~~~s~~~~~dLf~A~~~~l-G~lGVit~vtl~~~p~ 45 (366)
++++ +|+++++++ .|+.++.|-|. -.=-||++++|++.|.
T Consensus 130 ~~~~-~g~~~~~~~---~e~~f~YR~S~~~~~~iIl~a~f~l~~~ 170 (273)
T PRK14651 130 EIVH-DGGFHQYSP---DELGFGYRHSGLPPGHVVTRVRLKLRPS 170 (273)
T ss_pred EEEE-CCCEEEEEH---HHccccccccCCCCCEEEEEEEEEECCC
Confidence 5676 899999974 58888888763 2224999999999875
Done!