Your job contains 1 sequence.
>017773
MSNFHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATG
GIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYD
GVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCV
STVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIR
FLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV
FVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK
KPLSAQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017773
(366 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2172883 - symbol:RUP2 "AT5G23730" species:3702... 1236 7.8e-126 1
TAIR|locus:2145111 - symbol:RUP1 "AT5G52250" species:3702... 1067 6.3e-108 1
DICTYBASE|DDB_G0288453 - symbol:DDB_G0288453 "E3 ubiquiti... 543 1.5e-51 1
TAIR|locus:2059359 - symbol:COP1 "CONSTITUTIVE PHOTOMORPH... 522 3.6e-50 1
TAIR|locus:2037005 - symbol:SPA4 "SPA1-related 4" species... 480 4.3e-45 1
RGD|1304773 - symbol:Rfwd2 "ring finger and WD repeat dom... 474 4.4e-45 1
UNIPROTKB|H0Y339 - symbol:RFWD2 "E3 ubiquitin-protein lig... 473 5.6e-45 1
ZFIN|ZDB-GENE-070410-134 - symbol:rfwd2 "ring finger and ... 472 1.1e-44 1
MGI|MGI:1347046 - symbol:Rfwd2 "ring finger and WD repeat... 474 1.2e-44 1
UNIPROTKB|Q8NHY2 - symbol:RFWD2 "E3 ubiquitin-protein lig... 473 1.5e-44 1
UNIPROTKB|E2RRJ5 - symbol:RFWD2 "Uncharacterized protein"... 472 2.0e-44 1
UNIPROTKB|F1MHX1 - symbol:RFWD2 "Uncharacterized protein"... 472 2.0e-44 1
UNIPROTKB|F1NQ64 - symbol:RFWD2 "Uncharacterized protein"... 459 4.8e-43 1
TAIR|locus:2039139 - symbol:SPA1 "SUPPRESSOR OF PHYA-105 ... 456 4.3e-42 1
TAIR|locus:2136133 - symbol:SPA2 "SPA1-related 2" species... 454 7.2e-42 1
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 194 1.8e-12 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 170 2.3e-12 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 170 2.3e-12 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 190 5.2e-12 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 190 5.2e-12 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 190 5.2e-12 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 190 5.3e-12 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 189 6.9e-12 1
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 184 3.7e-11 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 181 4.6e-11 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 179 1.4e-10 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 170 3.0e-10 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 168 4.1e-10 1
POMBASE|SPBC21B10.05c - symbol:pop3 "WD repeat protein Po... 166 5.6e-10 1
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 165 9.7e-10 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 170 9.8e-10 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 165 9.9e-10 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 164 1.1e-09 1
FB|FBgn0036733 - symbol:U4-U6-60K "U4-U6 small nuclear ri... 166 2.1e-09 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 153 2.2e-09 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 167 2.3e-09 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 162 2.4e-09 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 153 3.5e-09 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 153 3.5e-09 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 153 3.5e-09 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 153 3.5e-09 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 153 3.5e-09 2
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 165 3.6e-09 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 165 3.6e-09 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 155 3.8e-09 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 159 4.0e-09 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 160 4.3e-09 1
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 160 1.1e-08 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 158 1.4e-08 1
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 159 1.4e-08 1
UNIPROTKB|F1MNS4 - symbol:TBL3 "Transducin beta-like prot... 148 1.5e-08 2
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 148 1.5e-08 2
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 158 1.9e-08 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 145 3.2e-08 2
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 157 3.8e-08 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 151 4.0e-08 2
WB|WBGene00020423 - symbol:prp-19 species:6239 "Caenorhab... 155 5.1e-08 2
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 154 5.5e-08 1
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 153 5.6e-08 1
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 153 5.6e-08 1
POMBASE|SPAC12G12.14c - symbol:pfs2 "WD repeat protein Pf... 152 6.9e-08 1
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 148 7.3e-08 1
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 148 7.3e-08 1
UNIPROTKB|F1PLR0 - symbol:GNB2L1 "Uncharacterized protein... 148 7.3e-08 1
UNIPROTKB|P63244 - symbol:GNB2L1 "Guanine nucleotide-bind... 148 7.3e-08 1
UNIPROTKB|I3LI24 - symbol:GNB2L1 "Guanine nucleotide-bind... 148 7.3e-08 1
UNIPROTKB|P63246 - symbol:GNB2L1 "Guanine nucleotide-bind... 148 7.3e-08 1
UNIPROTKB|B1N1C2 - symbol:GNB2L1 "Uncharacterized protein... 148 7.3e-08 1
UNIPROTKB|Q4R7Y4 - symbol:GNB2L1 "Guanine nucleotide-bind... 148 7.3e-08 1
UNIPROTKB|Q5U275 - symbol:gnb2l1 "LOC495666 protein" spec... 148 7.3e-08 1
MGI|MGI:101849 - symbol:Gnb2l1 "guanine nucleotide bindin... 148 7.3e-08 1
RGD|69229 - symbol:Gnb2l1 "guanine nucleotide binding pro... 148 7.3e-08 1
UNIPROTKB|G8JL27 - symbol:GNB2L1 "Guanine nucleotide-bind... 148 7.5e-08 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 148 8.7e-08 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 148 9.0e-08 2
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 152 1.0e-07 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 154 1.1e-07 1
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 145 1.4e-07 1
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 150 1.5e-07 1
ZFIN|ZDB-GENE-990415-89 - symbol:gnb2l1 "guanine nucleoti... 145 1.6e-07 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 147 1.7e-07 1
UNIPROTKB|J3KNP2 - symbol:TBL3 "Transducin beta-like prot... 136 1.9e-07 2
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 149 1.9e-07 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 149 1.9e-07 1
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 148 2.0e-07 1
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 148 2.0e-07 1
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 148 2.1e-07 1
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 148 2.1e-07 1
FB|FBgn0038927 - symbol:CG6015 species:7227 "Drosophila m... 148 2.4e-07 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 148 2.4e-07 1
UNIPROTKB|Q12788 - symbol:TBL3 "Transducin beta-like prot... 136 2.7e-07 2
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 146 2.8e-07 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 149 2.8e-07 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 149 2.9e-07 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 145 3.2e-07 1
UNIPROTKB|D6RFX4 - symbol:GNB2L1 "Guanine nucleotide-bind... 133 3.7e-07 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 135 3.9e-07 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 145 3.9e-07 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 144 4.4e-07 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 142 4.8e-07 1
WARNING: Descriptions of 371 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2172883 [details] [associations]
symbol:RUP2 "AT5G23730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0010224 "response to UV-B"
evidence=IGI] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0043496 "regulation of protein homodimerization activity"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AB005244 GO:GO:0009658 GO:GO:0010224
HSSP:P16649 KO:K10143 GO:GO:0080008 ProtClustDB:CLSN2687591
EMBL:AY039941 EMBL:BT015119 IPI:IPI00518125 RefSeq:NP_568435.2
UniGene:At.8740 ProteinModelPortal:Q9FFA7 SMR:Q9FFA7 PRIDE:Q9FFA7
EnsemblPlants:AT5G23730.1 GeneID:832438 KEGG:ath:AT5G23730
TAIR:At5g23730 HOGENOM:HOG000238730 InParanoid:Q9FFA7 OMA:QATACEY
PhylomeDB:Q9FFA7 Genevestigator:Q9FFA7 Uniprot:Q9FFA7
Length = 368
Score = 1236 (440.2 bits), Expect = 7.8e-126, P = 7.8e-126
Identities = 229/371 (61%), Positives = 272/371 (73%)
Query: 1 MSNFHDHQQPQAETTN-ERARCEWDFNLRTTXXXXXXXXXXXXXXIGVIEFDPSDSVFAT 59
M+ H H+Q Q + E AR EWD +L T IG IEFDP+D++ AT
Sbjct: 1 MNTLHPHKQQQEQAQQQEEARYEWDLSLSTVVSSSSSSASDV---IGAIEFDPTDNIVAT 57
Query: 60 GGIARKIRIYNIKSXXXXXXXXXXXXX----SKVCDYYICTPAKLSSLKWKPGTSGRVLG 115
GI+RKIR Y + S + C+YYICTPAKLSSL+W+PG+ GRV+G
Sbjct: 58 AGISRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIG 117
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK--GDPVLGASGSDDGTMQMWDPR 173
SGDYDGVVMEYDLEK+ P+FERDEHGGRRVWSVDY++ G +GASGSDDGTMQ+WDPR
Sbjct: 118 SGDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPR 177
Query: 174 CDGGKCVSTVQPSA-SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
C + V V+P+ RSAVCCVEF P G VA GCAD+K Y YD+RK+VDP L GH
Sbjct: 178 CPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGH 237
Query: 233 RKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
KTV+Y+RFLD T+VTAGTDGCLKLW+V D RVIRTY+GHVNNRNFVGLSVWR+G L G
Sbjct: 238 TKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFG 297
Query: 293 CGSETNQVFVYDVRWGEPVWVHDFEPVTA-AGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
CGSE N+VFVYD RWG+PVWV FEPV +GS++ FVSSVCWR+ G D+CTLVAGGSDG
Sbjct: 298 CGSENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDG 357
Query: 352 LLHVFVGKKKP 362
+L V+VGK+KP
Sbjct: 358 VLQVYVGKRKP 368
>TAIR|locus:2145111 [details] [associations]
symbol:RUP1 "AT5G52250" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0010224 "response to
UV-B" evidence=IEP;IGI;RCA] [GO:0010114 "response to red light"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009813 "flavonoid biosynthetic process" evidence=RCA]
[GO:0043496 "regulation of protein homodimerization activity"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0010218 GO:GO:0010114 GO:GO:0010224
HSSP:P16649 KO:K10143 GO:GO:0080008 EMBL:AB025603 EMBL:BT003150
EMBL:AK228112 EMBL:AY087205 IPI:IPI00517585 RefSeq:NP_200038.1
UniGene:At.29626 ProteinModelPortal:Q9LTJ6 SMR:Q9LTJ6 STRING:Q9LTJ6
EnsemblPlants:AT5G52250.1 GeneID:835301 KEGG:ath:AT5G52250
TAIR:At5g52250 InParanoid:Q9LTJ6 OMA:VVTEYDV PhylomeDB:Q9LTJ6
ProtClustDB:CLSN2687591 Genevestigator:Q9LTJ6 Uniprot:Q9LTJ6
Length = 385
Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
Identities = 204/343 (59%), Positives = 242/343 (70%)
Query: 20 RCEWDFNLRTTXXXXXXXXXXXXXXIGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXX 79
RC+WD +L IG IEFDP+ + ATGGIARKIR Y + S
Sbjct: 53 RCDWDLSLSAVVSSASTGSDA----IGAIEFDPTGEIIATGGIARKIRSYRLSSLLESRD 108
Query: 80 XXXXXXXSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
S YICTPAKLSSLKW+P SGRV+GSGDYDGVV EYD+EK+VP+ ERDE
Sbjct: 109 DHVTASES-----YICTPAKLSSLKWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDE 163
Query: 140 HGGRRVWSVDYSK-GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
HGGRR+WSVDY+ ++GASGSDDGT+QMWDPR +GG TV+P +A+C VEF
Sbjct: 164 HGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPR-NGGTLEETVRPGGG-AAICSVEFD 221
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKL 258
PFG S +A GCAD+ AY YD+R++VDP++V DGH KTVTY RF+D T+VT TDG LK
Sbjct: 222 PFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQ 281
Query: 259 WNV-NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
W++ N RV+RTY+GHVN+RNFVGLSVWRHGGL+ GSE NQVFVYD RW EPVWV
Sbjct: 282 WDIDNGRRVVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCGLG 341
Query: 318 PVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
GS+R FVSSVC R+V ED CTLVAGGSDG L +F GK+
Sbjct: 342 HTNRFGSDRRFVSSVCLRQVDEDWCTLVAGGSDGALEIFSGKQ 384
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 543 (196.2 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 116/316 (36%), Positives = 180/316 (56%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLK 104
+ IEFD + FAT G+ +KI+I+ S V + C +K+S L
Sbjct: 670 VSSIEFDRDEEYFATAGVTKKIKIFEFSQIRDNVEVH-----SPVKEM-TCR-SKISCLS 722
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W ++ S DY+G++ +D I +EH +RVWSVD+S+ DP ASGSDD
Sbjct: 723 WNTYIKSQI-ASSDYEGIISLWDANTGQNIMTLEEHE-KRVWSVDFSRTDPTQLASGSDD 780
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W + + ++T++ S++ +CCV+F+P S+L+A G AD + YD+R+ D
Sbjct: 781 TRVKLWSTTTE--RAITTIE---SKANICCVKFNPCSSNLIAFGSADHHIHYYDLRQYKD 835
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+L+F GHRK V+Y++F++ D +++A TD LKLWNVN + +RT+ GH N +NFVGL+V
Sbjct: 836 PLLIFKGHRKAVSYVKFMNKDEIISASTDSTLKLWNVNQNDCVRTFTGHSNEKNFVGLTV 895
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG-----FVSSVCWRRVGE 339
+G + CGSE N V+ Y +P+ H F + G E FVSSVCW++
Sbjct: 896 --NGDYICCGSENNGVYTYYKTLSKPIVTHRFGANSGTGEETDDDGSQFVSSVCWKK--- 950
Query: 340 DECTLVAGGSDGLLHV 355
D L+A S G + +
Sbjct: 951 DSNILLAANSQGNIKI 966
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 115/318 (36%), Positives = 178/318 (55%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYY-ICTPAKLSSL 103
+ IEFD D +FAT G++R I++++ S C + T +KLS L
Sbjct: 374 VSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQ-------CPIVEMSTRSKLSCL 426
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
W + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P + SGSD
Sbjct: 427 SWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEHE-KRAWSVDFSRTEPSMLVSGSD 484
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D +++W R + V + A+ +CCV+++P S+ +A G AD + YD+R +
Sbjct: 485 DCKVKVWCTRQEAS--VINIDMKAN---ICCVKYNPGSSNYIAVGSADHHIHYYDLRNIS 539
Query: 224 DPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
P+ VF GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NFVGL+
Sbjct: 540 QPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLT 599
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-EP-VTAAGSERG--FVSSVCWRRVGE 339
V + L CGSETN+V+VY PV H F P + A E G F+S+VCW+
Sbjct: 600 V--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWK---S 654
Query: 340 DECTLVAGGSDGLLHVFV 357
D T++ S G + V V
Sbjct: 655 DSPTMLTANSQGTIKVLV 672
>TAIR|locus:2037005 [details] [associations]
symbol:SPA4 "SPA1-related 4" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0006281
"DNA repair" evidence=RCA] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA] [GO:0048608 "reproductive
structure development" evidence=RCA] InterPro:IPR017986
InterPro:IPR000719 InterPro:IPR001680 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400 PROSITE:PS50011
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
EMBL:AC022520 GO:GO:0080008 HOGENOM:HOG000029775 EMBL:AY040023
EMBL:AY133883 IPI:IPI00544468 PIR:E96571 RefSeq:NP_175717.1
RefSeq:NP_849802.1 UniGene:At.21898 ProteinModelPortal:Q94BM7
SMR:Q94BM7 IntAct:Q94BM7 STRING:Q94BM7 PaxDb:Q94BM7 PRIDE:Q94BM7
EnsemblPlants:AT1G53090.1 EnsemblPlants:AT1G53090.2 GeneID:841743
KEGG:ath:AT1G53090 GeneFarm:2950 TAIR:At1g53090 InParanoid:Q94BM7
OMA:WSINQGV PhylomeDB:Q94BM7 ProtClustDB:PLN00181
Genevestigator:Q94BM7 Uniprot:Q94BM7
Length = 794
Score = 480 (174.0 bits), Expect = 4.3e-45, P = 4.3e-45
Identities = 121/320 (37%), Positives = 177/320 (55%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLKWKP 107
I FD FAT G+ +KI+I+ +S V + + + +KLS + W
Sbjct: 490 IGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHY----PVVE--LASRSKLSGICWNS 543
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+V S +++GVV +D+ + + E EH +RVWS+DYS DP L ASGSDDG++
Sbjct: 544 YIKSQV-ASSNFEGVVQVWDVARNQLVTEMKEHE-KRVWSIDYSSADPTLLASGSDDGSV 601
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEF-HPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
++W + G + T++ A+ +CCV+F G SL A G AD K Y YD+R P+
Sbjct: 602 KLWS--INQGVSIGTIKTKAN---ICCVQFPSETGRSL-AFGSADHKVYYYDLRNPKLPL 655
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDS------RVIRTYKGHVNNRNFV 280
GH KTV+Y+RF+D TLV++ TD LKLW+++ S + ++ GH N +NFV
Sbjct: 656 CTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFV 715
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSERG--FVSSVCWR 335
GLSV G + GSETN+VFVY + PV + F +PV+ + F+SSVCWR
Sbjct: 716 GLSV--SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFISSVCWR 773
Query: 336 RVGEDECTLVAGGSDGLLHV 355
G+ TLVA S G + +
Sbjct: 774 --GQSS-TLVAANSTGNIKI 790
>RGD|1304773 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1304773 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 KO:K10143 CTD:64326 HOVERGEN:HBG054995 EMBL:BC091284
IPI:IPI00363852 RefSeq:NP_001020297.1 UniGene:Rn.8617
ProteinModelPortal:Q5BJY0 PhosphoSite:Q5BJY0 GeneID:360860
KEGG:rno:360860 NextBio:674404 Genevestigator:Q5BJY0 Uniprot:Q5BJY0
Length = 433
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 107/321 (33%), Positives = 170/321 (52%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y + C+ +K+S +
Sbjct: 126 VSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKISCIS 179
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 180 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 235
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 236 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 290
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL
Sbjct: 291 KQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGL 350
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA-GSERG------FVSSVCWR 335
+ +G + CGSE N +++Y + + F+ V + +R FVS+VCWR
Sbjct: 351 A--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR 408
Query: 336 RVGEDECT-LVAGGSDGLLHV 355
+ + E L+A S G + V
Sbjct: 409 ALSDGESNVLIAANSQGTIKV 429
>UNIPROTKB|H0Y339 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL359265 EMBL:AL162736 EMBL:AL513329 EMBL:AL590723
HGNC:HGNC:17440 ChiTaRS:RFWD2 Ensembl:ENST00000367666 Bgee:H0Y339
Uniprot:H0Y339
Length = 566
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 107/321 (33%), Positives = 170/321 (52%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y + C+ +K+S +
Sbjct: 259 VSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKISCIS 312
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 313 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 368
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 369 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 423
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL
Sbjct: 424 KQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGL 483
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA-GSERG------FVSSVCWR 335
+ +G + CGSE N +++Y + + F+ V + +R FVS+VCWR
Sbjct: 484 A--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR 541
Query: 336 RVGEDECT-LVAGGSDGLLHV 355
+ + E L+A S G + V
Sbjct: 542 ALPDGESNVLIAANSQGTIKV 562
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 472 (171.2 bits), Expect = 1.1e-44, P = 1.1e-44
Identities = 106/321 (33%), Positives = 169/321 (52%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI+++ + C+ +K+S +
Sbjct: 387 VSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCN------SKISCIS 440
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 441 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 496
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 497 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPTSRYHLAFGCADHCVHYYDLRNA 551
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F++ +V+A TD LKLWNVN +R++KGH+N +NFVGL
Sbjct: 552 KQPIMVFKGHRKAVSYAKFVNGGEIVSASTDSQLKLWNVNKPHCLRSFKGHINEKNFVGL 611
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA-------GSERGFVSSVCWR 335
+ +G + CGSE N +++Y + + F+ V + FVS+VCWR
Sbjct: 612 A--SNGDYVACGSENNSLYLYCKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAVCWR 669
Query: 336 RVGEDECT-LVAGGSDGLLHV 355
+ + E L+A S G + V
Sbjct: 670 ALPDGESNVLIAANSQGTIKV 690
>MGI|MGI:1347046 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1347046
Prosite:PS00518 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0016874 GO:GO:0016607 GO:GO:0008270 eggNOG:COG2319
GO:GO:0005925 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
CTD:64326 HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 ChiTaRS:RFWD2
EMBL:AF151110 EMBL:BC082804 IPI:IPI00621828 RefSeq:NP_036061.1
UniGene:Mm.328135 ProteinModelPortal:Q9R1A8 SMR:Q9R1A8
STRING:Q9R1A8 PhosphoSite:Q9R1A8 PaxDb:Q9R1A8 PRIDE:Q9R1A8
Ensembl:ENSMUST00000076894 GeneID:26374 KEGG:mmu:26374
UCSC:uc007ddz.1 GeneTree:ENSGT00700000104377 InParanoid:Q9R1A8
NextBio:304277 Bgee:Q9R1A8 CleanEx:MM_RFWD2 Genevestigator:Q9R1A8
GermOnline:ENSMUSG00000048949 Uniprot:Q9R1A8
Length = 733
Score = 474 (171.9 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 107/321 (33%), Positives = 170/321 (52%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y + C+ +K+S +
Sbjct: 426 VSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKISCIS 479
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 480 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 535
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 536 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 590
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL
Sbjct: 591 KQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGL 650
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA-GSERG------FVSSVCWR 335
+ +G + CGSE N +++Y + + F+ V + +R FVS+VCWR
Sbjct: 651 A--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR 708
Query: 336 RVGEDECT-LVAGGSDGLLHV 355
+ + E L+A S G + V
Sbjct: 709 ALSDGESNVLIAANSQGTIKV 729
>UNIPROTKB|Q8NHY2 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006977
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 eggNOG:COG2319 EMBL:CH471067 GO:GO:0005925
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
EMBL:AF508940 EMBL:BK000438 EMBL:AF527539 EMBL:AY509921
EMBL:AK025789 EMBL:AK314750 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 EMBL:BC094728 IPI:IPI00171771
IPI:IPI00184865 IPI:IPI00431955 RefSeq:NP_001001740.1
RefSeq:NP_071902.2 UniGene:Hs.523744 ProteinModelPortal:Q8NHY2
SMR:Q8NHY2 IntAct:Q8NHY2 MINT:MINT-260162 STRING:Q8NHY2
PhosphoSite:Q8NHY2 DMDM:55976539 PaxDb:Q8NHY2 PRIDE:Q8NHY2
DNASU:64326 Ensembl:ENST00000308769 Ensembl:ENST00000367669
GeneID:64326 KEGG:hsa:64326 UCSC:uc001gku.1 UCSC:uc001gkv.1
UCSC:uc009wwv.2 CTD:64326 GeneCards:GC01M175913 HGNC:HGNC:17440
HPA:HPA028197 MIM:608067 neXtProt:NX_Q8NHY2 PharmGKB:PA134952161
HOVERGEN:HBG054995 InParanoid:Q8NHY2 OrthoDB:EOG4M0F18
ChiTaRS:RFWD2 GenomeRNAi:64326 NextBio:66247 ArrayExpress:Q8NHY2
Bgee:Q8NHY2 CleanEx:HS_RFWD2 Genevestigator:Q8NHY2
GermOnline:ENSG00000143207 Uniprot:Q8NHY2
Length = 731
Score = 473 (171.6 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 107/321 (33%), Positives = 170/321 (52%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y + C+ +K+S +
Sbjct: 424 VSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKISCIS 477
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 478 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 533
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 534 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 588
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL
Sbjct: 589 KQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGL 648
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA-GSERG------FVSSVCWR 335
+ +G + CGSE N +++Y + + F+ V + +R FVS+VCWR
Sbjct: 649 A--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR 706
Query: 336 RVGEDECT-LVAGGSDGLLHV 355
+ + E L+A S G + V
Sbjct: 707 ALPDGESNVLIAANSQGTIKV 727
>UNIPROTKB|E2RRJ5 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 OMA:PICFEMI
CTD:64326 GeneTree:ENSGT00700000104377 EMBL:AAEX03005193
EMBL:AAEX03005194 RefSeq:XP_537181.2 ProteinModelPortal:E2RRJ5
Ensembl:ENSCAFT00000022674 GeneID:480060 KEGG:cfa:480060
Uniprot:E2RRJ5
Length = 733
Score = 472 (171.2 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 107/321 (33%), Positives = 170/321 (52%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y + C+ +K+S +
Sbjct: 426 VSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKISCIS 479
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 480 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 535
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 536 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 590
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL
Sbjct: 591 KQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGL 650
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA-GSERG------FVSSVCWR 335
+ +G + CGSE N +++Y + + F+ V + +R FVS+VCWR
Sbjct: 651 A--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR 708
Query: 336 RVGEDECT-LVAGGSDGLLHV 355
+ + E L+A S G + V
Sbjct: 709 ALPDGESNVLIAANSQGTIKV 729
>UNIPROTKB|F1MHX1 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:DAAA02043390 EMBL:DAAA02043391
EMBL:DAAA02043392 IPI:IPI00841834 UniGene:Bt.7449
Ensembl:ENSBTAT00000044452 ArrayExpress:F1MHX1 Uniprot:F1MHX1
Length = 735
Score = 472 (171.2 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 107/321 (33%), Positives = 170/321 (52%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y + C+ +K+S +
Sbjct: 428 VSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKISCIS 481
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 482 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 537
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 538 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 592
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL
Sbjct: 593 KQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGL 652
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA-GSERG------FVSSVCWR 335
+ +G + CGSE N +++Y + + F+ V + +R FVS+VCWR
Sbjct: 653 A--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR 710
Query: 336 RVGEDECT-LVAGGSDGLLHV 355
+ + E L+A S G + V
Sbjct: 711 ALPDGESNVLIAANSQGTIKV 731
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 459 (166.6 bits), Expect = 4.8e-43, P = 4.8e-43
Identities = 102/309 (33%), Positives = 164/309 (53%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y + C+ +K+S +
Sbjct: 410 VSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKISCIS 463
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 464 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 519
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 520 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 574
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL
Sbjct: 575 KQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNFVGL 634
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA-GSERG------FVSSVCWR 335
+ +G + CGSE N +++Y + + F+ V + +R FVS+VCWR
Sbjct: 635 A--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR 692
Query: 336 RVGEDECTL 344
+ + T+
Sbjct: 693 ALPDGHSTV 701
>TAIR|locus:2039139 [details] [associations]
symbol:SPA1 "SUPPRESSOR OF PHYA-105 1" species:3702
"Arabidopsis thaliana" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048575 "short-day photoperiodism, flowering"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:2000028 "regulation of
photoperiodism, flowering" evidence=IMP] [GO:0010017 "red or
far-red light signaling pathway" evidence=IMP] [GO:0010114
"response to red light" evidence=IEP] [GO:0010218 "response to far
red light" evidence=IEP] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0048608 "reproductive
structure development" evidence=RCA] [GO:0009585 "red, far-red
light phototransduction" evidence=IGI] InterPro:IPR017986
InterPro:IPR000719 InterPro:IPR001680 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400 PROSITE:PS00107
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0009640 GO:GO:0010218
GO:GO:0010114 GO:GO:0009658 GO:GO:0004672 GO:GO:0009585
EMBL:AC006526 HSSP:P16649 GO:GO:0080008 GO:GO:0010100 GO:GO:0048575
EMBL:AF135455 EMBL:AK227186 EMBL:AK221994 IPI:IPI00541649
PIR:F84901 PIR:G84901 RefSeq:NP_182157.2 UniGene:At.11156
ProteinModelPortal:Q9SYX2 SMR:Q9SYX2 IntAct:Q9SYX2 MINT:MINT-276478
STRING:Q9SYX2 PaxDb:Q9SYX2 PRIDE:Q9SYX2 EnsemblPlants:AT2G46340.1
GeneID:819242 KEGG:ath:AT2G46340 GeneFarm:2885 TAIR:At2g46340
HOGENOM:HOG000029775 InParanoid:Q9SYX2 KO:K16240 OMA:LKSELIC
PhylomeDB:Q9SYX2 ProtClustDB:CLSN2918282 Genevestigator:Q9SYX2
GO:GO:2000028 Uniprot:Q9SYX2
Length = 1029
Score = 456 (165.6 bits), Expect = 4.3e-42, P = 4.3e-42
Identities = 116/318 (36%), Positives = 163/318 (51%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLKWKP 107
+ FDP + A GI++KI+I++ + V +KLS + W
Sbjct: 722 LSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMV------NKSKLSCVCWNS 775
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
L S DYDGVV +D + EH +R WSVD+S DP SGSDD ++
Sbjct: 776 YIKN-YLASTDYDGVVQIWDAGTGQGFSQYTEHQ-KRAWSVDFSPSDPTKFVSGSDDCSV 833
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W + + + T+ A+ VCCV+F + + L+A G AD K Y YD+R + P
Sbjct: 834 KLWS--INEKRSLGTIWSPAN---VCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWC 888
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--------VIRTYKGHVNNRNF 279
GH K V+Y++F+D +T+V+A TD LKLWN+N + TYKGH N +NF
Sbjct: 889 TLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNF 948
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA-AGSE----RG-FVSSVC 333
VGLSV G + CGSETN+V+ Y P+ + F V +G+E G FVSSVC
Sbjct: 949 VGLSVL--DGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVC 1006
Query: 334 WRRVGEDECTLVAGGSDG 351
WR+ LVA S G
Sbjct: 1007 WRKKSN---MLVAANSTG 1021
>TAIR|locus:2136133 [details] [associations]
symbol:SPA2 "SPA1-related 2" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR017986 InterPro:IPR000719 InterPro:IPR001680
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400
PROSITE:PS50011 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161531 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
GO:GO:0080008 EMBL:AF080120 EMBL:AL049876 HOGENOM:HOG000029775
EMBL:AK229182 IPI:IPI00538672 PIR:T01922 PIR:T01923 PIR:T08190
RefSeq:NP_192849.4 UniGene:At.46392 ProteinModelPortal:Q9T014
SMR:Q9T014 IntAct:Q9T014 STRING:Q9T014 PRIDE:Q9T014
EnsemblPlants:AT4G11110.1 GeneID:826712 KEGG:ath:AT4G11110
GeneFarm:3132 TAIR:At4g11110 InParanoid:Q0WP97 OMA:FGGHTNE
PhylomeDB:Q9T014 ProtClustDB:CLSN2920287 Genevestigator:Q9T014
Uniprot:Q9T014
Length = 1036
Score = 454 (164.9 bits), Expect = 7.2e-42, P = 7.2e-42
Identities = 113/320 (35%), Positives = 166/320 (51%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLKWKPGT 109
FD + FAT G+++KI+IY S + +KLS + W
Sbjct: 731 FDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYPAIE------MPNRSKLSGVCWN-NY 783
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
L S DYDG+V +D+ I EH +R WSVD+S+ P ASGSDD ++++
Sbjct: 784 IRNYLASSDYDGIVKLWDVTTGQAISHFIEHE-KRAWSVDFSEACPTKLASGSDDCSVKL 842
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W+ + C+ T++ A+ VCCV+F P S L+A G +D + Y YD+R + P +
Sbjct: 843 WN--INERNCLGTIRNIAN---VCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCIL 897
Query: 230 DGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV--------NDSRVIRTYKGHVNNRNFVG 281
GH K V+Y +FLD +TLVTA TD LKLW++ + + T+ GH N +NFVG
Sbjct: 898 SGHNKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVG 957
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSERG---FVSSVCWR 335
LS G + CGSETN+V+ Y P+ + F +P++ E FVSSVCWR
Sbjct: 958 LST--SDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSSVCWR 1015
Query: 336 RVGEDECTLVAGGSDGLLHV 355
+ +V+ S+G + V
Sbjct: 1016 KRSN---MVVSASSNGSIKV 1032
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 194 (73.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 70/259 (27%), Positives = 108/259 (41%)
Query: 49 EFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLKWKPG 108
EF P ++ A G IR+++IK+ S + + + P
Sbjct: 331 EFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSP- 389
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ L S D + ++ K + H G VW V + A+ S D T Q
Sbjct: 390 -DNKYLLSCSEDASARLWSVDTKTALVAYKGHTGP-VWDVAFGPFGHYF-ATASHDQTAQ 446
Query: 169 MWDPRCDGGKCVSTVQPSASR-SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+W CD + ++ A S V CV FHP S+ V G +DK +DV + V
Sbjct: 447 LWS--CDH---IYPLRVFAGHLSDVDCVTFHP-NSAYVLTGSSDKTCRLWDVHRG-HSVR 499
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
VF+GH + VT + D T+ +A ++G + LW++ R I+T +GH N LS R
Sbjct: 500 VFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGH--RGNIYSLSFSR 557
Query: 287 HGGLLGCGSETNQVFVYDV 305
+L G V +DV
Sbjct: 558 ESTVLVSGGSDCTVRAWDV 576
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 170 (64.9 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 49/172 (28%), Positives = 85/172 (49%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 36 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 93
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 94 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 147
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
GH + V +RF D L +A D +KLW++ +++ + GH N V
Sbjct: 148 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 199
Score = 120 (47.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 32/136 (23%), Positives = 62/136 (45%)
Query: 173 RCDGGKCVSTVQPS-ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
RC V+ V+ A S V + L+A G D + + + K + ++ G
Sbjct: 7 RCAQAAAVAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKP-NCIMSLTG 65
Query: 232 HRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
H V +R + L+ AG+ G +++W++ ++++RT GH N L +G
Sbjct: 66 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH--KANICSLDFHPYGEF 123
Query: 291 LGCGSETNQVFVYDVR 306
+ GS+ + ++D+R
Sbjct: 124 VASGSQDTNIKLWDIR 139
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 170 (64.9 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 49/172 (28%), Positives = 85/172 (49%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
GH + V +RF D L +A D +KLW++ +++ + GH N V
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Score = 113 (44.8 bits), Expect = 0.00024, P = 0.00024
Identities = 25/104 (24%), Positives = 52/104 (50%)
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVN 262
L+A G D + + + K + ++ GH V +R + L+ AG+ G +++W++
Sbjct: 35 LLATGGDDCRVNLWSINKP-NCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
++++RT GH N L +G + GS+ + ++D+R
Sbjct: 94 AAKILRTLMGH--KANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 190 (71.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 67/244 (27%), Positives = 111/244 (45%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D+ F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWDLE--------KFQVVSCIEGEPGPVRSVLFN---PDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 190 (71.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 67/244 (27%), Positives = 111/244 (45%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D+ F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWDLE--------KFQVVSCIEGEPGPVRSVLFN---PDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 190 (71.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 67/244 (27%), Positives = 111/244 (45%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D+ F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWDLE--------KFQVVSCIEGEPGPVRSVLFN---PDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 190 (71.9 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 67/244 (27%), Positives = 111/244 (45%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D+ F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWDLE--------KFQVVSCIEGEPGPVRSVLFN---PDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 189 (71.6 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 66/244 (27%), Positives = 111/244 (45%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D+ F+ V+ E G V S+ + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWDLE--------KFQVVSCIEGEPGPVRSILFN---PDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 184 (69.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 58/197 (29%), Positives = 92/197 (46%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H + SV + + VL A+G+ GT+++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG-IDSVTFDASE-VLVAAGAASGTIKL 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + RS V+FHPFG A+G D +D+RK + +
Sbjct: 86 WD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHTY 139
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D +V+ G D +K+W++ +++ +K H L H
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQ--IQSLDFHPHE 197
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V +D+
Sbjct: 198 FLLATGSADRTVKFWDL 214
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A +AV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP-NAILSLYGHSSGIDSVTFDASEV 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H ++ G RG V+ + R D +V+GG D ++ V+
Sbjct: 131 R--KKGCIHTYK-----GHTRG-VNVL---RFTPDGRWVVSGGEDNIVKVW 170
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 181 (68.8 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 61/218 (27%), Positives = 103/218 (47%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEP--VTAAGS 324
LL GS + +D+ + V + EP V AGS
Sbjct: 203 -LLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGS 239
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 56/197 (28%), Positives = 91/197 (46%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H + SV + + ++ A+G+ GT+++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG-IDSVTFDASEGLV-AAGAASGTIKL 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + RS V FHPFG A+G D +D+RK + +
Sbjct: 86 WD--LEEAKVVRTL--TGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHTY 139
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D +V+ G D +K+W++ +++ +K H L H
Sbjct: 140 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGK--IQSLDFHPHE 197
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V +D+
Sbjct: 198 FLLATGSADKTVKFWDL 214
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 45/171 (26%), Positives = 81/171 (47%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A +AV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP-NAILSLYGHSSGIDSVTFDASEG 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++V+RT GH N V ++ G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKVVRTLTGH--RSNCVSVNFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H ++ G RG V+ + R D +V+GG D ++ V+
Sbjct: 131 R--KKGCIHTYK-----GHTRG-VNVL---RFTPDGRWIVSGGEDNVVKVW 170
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 170 (64.9 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 57/215 (26%), Positives = 101/215 (46%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+S + W + R+L SG D + ++L + H V+ +++ ++
Sbjct: 117 ISDVAWS--SDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNY-VFCCNFNPQSNLI-V 172
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD R GKC+ T+ P+ S V V F+ GS L+ + D +D
Sbjct: 173 SGSFDESVRIWDVRT--GKCLKTL-PAHS-DPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 227
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D V++++F + A T D LKLW+ + + ++TY GH N +
Sbjct: 228 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 287
Query: 279 --FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F SV G + GSE N V++++++ E V
Sbjct: 288 CIFANFSV-TGGKWIVSGSEDNMVYIWNLQSKEVV 321
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 168 (64.2 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 58/218 (26%), Positives = 107/218 (49%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+S + W + +++ S D + +D+E + H V+ V ++ ++
Sbjct: 91 ISDIAWSQDS--KLICSASDDKTIKIWDVESGKMVKTLKGHK-EYVFGVSFNPQSNLI-V 146
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D +++WD + G+C + SA V V F+ G+ LV +G D +D
Sbjct: 147 SGSFDENVRIWD--VNTGECTKMI--SAHSDPVTGVHFNRDGT-LVVSGSYDGTVRIWDT 201
Query: 220 R--KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSR-VIRTYKGHVN 275
++++ + DG K V++++F V AGT D L+LW+ N+++ ++TY GH N
Sbjct: 202 TTGQLLNTISTEDG--KEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKN 259
Query: 276 NRN--FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ F SV G + GSE N +++Y+++ E V
Sbjct: 260 EKYCIFSTFSV-TCGKWIVTGSEDNLIYIYNLQTREIV 296
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 49/173 (28%), Positives = 86/173 (49%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGRR-VWSVDYSKGDPVL 157
+SS+K+ P G+ L S D + + + K FER G + + + +S+ D L
Sbjct: 49 ISSVKFSP--DGKWLASASADKTIKIWGAYDGK---FERTLEGHKEGISDIAWSQ-DSKL 102
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S SDD T+++WD + GK V T++ + V V F+P S+L+ +G D+ +
Sbjct: 103 ICSASDDKTIKIWD--VESGKMVKTLK--GHKEYVFGVSFNP-QSNLIVSGSFDENVRIW 157
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRT 269
DV + + H VT + F TLV +G+ DG +++W+ +++ T
Sbjct: 158 DVNTG-ECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNT 209
Score = 121 (47.7 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 43/144 (29%), Positives = 73/144 (50%)
Query: 191 AVCCVEFHPFGSSLVAAGCADK--KAY-AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTL 247
++ V+F P G L +A ADK K + AYD + + L +GH++ ++ I + L
Sbjct: 48 SISSVKFSPDGKWLASAS-ADKTIKIWGAYDGK--FERTL--EGHKEGISDIAWSQDSKL 102
Query: 248 V-TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV-GLSVWRHGGLLGCGSETNQVFVYDV 305
+ +A D +K+W+V ++++T KGH + +V G+S L+ GS V ++DV
Sbjct: 103 ICSASDDKTIKIWDVESGKMVKTLKGH---KEYVFGVSFNPQSNLIVSGSFDENVRIWDV 159
Query: 306 RWGE---PVWVHDFEPVTAAGSER 326
GE + H +PVT R
Sbjct: 160 NTGECTKMISAHS-DPVTGVHFNR 182
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 166 (63.5 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 62/211 (29%), Positives = 95/211 (45%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
SV Y VL S D T++ W+ G C T+Q + S+ C+ P L A
Sbjct: 2 SVQYPPQHSVLLVSSGYDHTIRFWEAL--SGICSRTIQHADSQVNRLCIS--PDKKFLAA 57
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSR 265
AG + Y + + P++ F+GH VT I F D L T+ DG +K+W++
Sbjct: 58 AGNPHVRLYDINTSSQM-PLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPS 116
Query: 266 VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
V R Y H + N + + G LL C ++ +V +D+ GE H+ P E
Sbjct: 117 VQRNYD-HKSPVNDLLIHP-NQGELLSC-DQSGRVRAWDL--GENSCTHELIP-----EE 166
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+SS+ VG D L+AG + G +V+
Sbjct: 167 DVPMSSIT---VGSDGSMLIAGNNKGNCYVW 194
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 165 (63.1 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 67/266 (25%), Positives = 117/266 (43%)
Query: 47 VIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAK--LSSLK 104
V FDPS S FA+GG+ R+I ++N+ V +Y + K ++ L+
Sbjct: 55 VARFDPSGSYFASGGMDRQILLWNV--------------FGDVKNYGVLNGCKGAITDLQ 100
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W RV+ D +M +D I + H G V ++D K L S SDD
Sbjct: 101 WS--RDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGV-VNALDVLKVGSELLTSVSDD 157
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
TM++WD R C+ T++ +AV + G+ + G D +D+R
Sbjct: 158 CTMKVWDSRSKD--CIKTIEEKYPLTAVAIAQQ---GTQVFIGGI-DGAIKIWDLRNN-H 210
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKG--HVNNR 277
V GH+ +T + D +L++ D +++++V R ++ ++G H
Sbjct: 211 CSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEH 270
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVY 303
N +G++ R+ +G GS V+V+
Sbjct: 271 NLLGVAWSRNSRFVGAGSSDKNVYVW 296
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 170 (64.9 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 56/209 (26%), Positives = 99/209 (47%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+ +SSL T GR+L +G D V + + K + H + S+ S + ++
Sbjct: 21 SNVSSLVLGKST-GRLLATGGDDCRVNVWSVNKPNCVMSLTGHT-TPIESLQISAKEELI 78
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
A GS G++++WD + K + T+ ++ +C ++FHP+GS VA+G D +
Sbjct: 79 VA-GSQSGSIRVWD--LEAAKILRTLL--GHKANICSLDFHPYGS-FVASGSLDTDIKLW 132
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
DVR+ + + H + V +RF D L +A D +KLW++ +V+ + GH
Sbjct: 133 DVRRK-GCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGP 191
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
N V + LL GS + +D+
Sbjct: 192 VNVVEFHPSEY--LLASGSSDRTIRFWDL 218
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 165 (63.1 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 55/210 (26%), Positives = 92/210 (43%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
L W + G + S D V +D+E I + EH +G P++ SGS
Sbjct: 102 LHWT--SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI-ISGS 158
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DDGT ++WD R G +Q + + V F + G D +D+RK
Sbjct: 159 DDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDAADKIFTGG-VDNDVKVWDLRKG 212
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN- 276
+ + +GH+ T+T + D L+T G D L +W++ +R ++ ++GH +N
Sbjct: 213 -EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNF 271
Query: 277 -RNFVGLSVWRHGGL-LGCGSETNQVFVYD 304
+N + S W G + GS V ++D
Sbjct: 272 EKNLLKCS-WSPDGTKVTAGSSDRMVHIWD 300
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/264 (23%), Positives = 115/264 (43%)
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDY-SKGDP 155
P+ + ++K+ P +G ++ SG +D + + + F + + + + S G
Sbjct: 53 PSAVYTMKFNP--AGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ 110
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
++ AS D T++ WD + GK + + +S CC G L+ +G D A
Sbjct: 111 IVSAS--PDKTVRAWD--VETGKQIKKMAEHSSFVNSCCPTRR--GPPLIISGSDDGTAK 164
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D+R+ + F + +T + F D D + T G D +K+W++ T +GH
Sbjct: 165 LWDMRQR-GAIQTFPD-KYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQ 222
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVTAAGSERGFVSSV 332
+ G+S+ G L N++ V+D+R P V FE G + F ++
Sbjct: 223 DT--ITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFE-----GHQHNFEKNL 275
Query: 333 CWRRVGEDECTLVAGGSDGLLHVF 356
D + AG SD ++H++
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIW 299
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 55/216 (25%), Positives = 105/216 (48%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
++S + W +S R++ + D D + +D+ + H V+ D++ ++
Sbjct: 83 EISDVAWSSDSS-RLVSASD-DKTLKVWDMRSGKCLKTLKGHSDF-VFCCDFNPPSNLI- 138
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SGS D ++++W+ + GKC+ T+ SA + V F+ GS L+ +G D +D
Sbjct: 139 VSGSFDESVKIWEVKT--GKCLKTL--SAHSDPISAVNFNCNGS-LIVSGSYDGLCRIWD 193
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ D V++++F + ++TA D LKLW+ + R ++TY GH N +
Sbjct: 194 AASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEK 253
Query: 278 N--FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F SV ++ GSE N V++++++ E V
Sbjct: 254 YCLFASFSVTGRKWVVS-GSEDNMVYIWNLQTKEIV 288
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 49/181 (27%), Positives = 84/181 (46%)
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
P ++S + + P SGR L + YD +DLE+K + ++ H + V + Y V
Sbjct: 353 PHRVSKVAFHP--SGRFLATACYDSSWRLWDLEQKTEVLHQEGHA-KPVHCLSYHSDGSV 409
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L +G D ++WD R G+C+ ++ AV V+F P G +A G D
Sbjct: 410 L-VTGGLDAFGRVWDLRT--GRCIMFLE--GHLGAVFGVDFSPNGFH-IATGSQDNTCKI 463
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D+R+ PV H ++ +++ LVT D K+W+ + ++T +GH
Sbjct: 464 WDLRRR-QPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHD 522
Query: 275 N 275
N
Sbjct: 523 N 523
Score = 145 (56.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 43/155 (27%), Positives = 73/155 (47%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASG DG +++W + + ++ + V V FHP G L A C D +D
Sbjct: 326 ASGGHDGAVKLWG--FNNEESIADITGHMPHR-VSKVAFHPSGRFLATA-CYDSSWRLWD 381
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + + VL +GH K V + + D LVT G D ++W++ R I +GH+
Sbjct: 382 LEQKTE-VLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGA- 439
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
G+ +G + GS+ N ++D+R +PV+
Sbjct: 440 -VFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVY 473
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 153 (58.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD + GKC+ T+ P+ S V V F+ GS L+ + D +D
Sbjct: 120 SGSFDESVRIWDVKT--GKCLKTL-PAHS-DPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 174
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D V++++F + A T D LKLW+ + + ++TY GH N +
Sbjct: 175 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 234
Query: 279 --FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F SV G + GSE N V++++++ E V
Sbjct: 235 CIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEIV 268
Score = 140 (54.3 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGRR-VWSVDYSKGDPVL 157
+SS+K+ P +G L S D ++ + + K FE+ G + + V +S +L
Sbjct: 22 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLL 76
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S SDD T+++WD GKC+ T++ S CC F+P S+L+ +G D+ +
Sbjct: 77 -VSASDDKTLKIWD--VSSGKCLKTLK-GHSNYVFCC-NFNP-QSNLIVSGSFDESVRIW 130
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
DV K + H V+ + F D +V++ DG ++W+ + ++T
Sbjct: 131 DV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 182
Score = 115 (45.5 bits), Expect = 0.00040, P = 0.00040
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 191 AVCCVEFHPFGSSLVAAGCADK--KAY-AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
AV V+F P G L A+ ADK K + AYD K + GH+ ++ + + D +
Sbjct: 21 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYD-GKFEKTI---SGHKLGISDVAWSSDSNL 75
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETNQVFVYDV 305
LV+A D LK+W+V+ + ++T KGH N+V + L+ GS V ++DV
Sbjct: 76 LVSASDDKTLKIWDVSSGKCLKTLKGH---SNYVFCCNFNPQSNLIVSGSFDESVRIWDV 132
Query: 306 RWGE---PVWVHDFEPVTAAGSER 326
+ G+ + H +PV+A R
Sbjct: 133 KTGKCLKTLPAHS-DPVSAVHFNR 155
Score = 45 (20.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKS 73
F+P ++ +G +RI+++K+
Sbjct: 111 FNPQSNLIVSGSFDESVRIWDVKT 134
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 64/249 (25%), Positives = 112/249 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+SGR+L +G D V + + K I H V + ++ + + A GS G+++
Sbjct: 31 SSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSA-VGCIQFNSSEERVVA-GSLSGSLR 88
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K + T+ ++++ ++FHP G L A+G D +DVR+ V
Sbjct: 89 LWD--LEAAKILRTLM--GHKASISSLDFHPMGEYL-ASGSVDSNIKLWDVRRK-GCVFR 142
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V + F D L +A D +KLW++ ++I + H + N V +
Sbjct: 143 YKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEY 202
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS V ++D+ F + ++ E G V SV + G C +
Sbjct: 203 --LLASGSADRTVKLWDLE--------KFNMIGSSEGETGVVRSVLFNPDGS--C--LYS 248
Query: 348 GSDGLLHVF 356
GS+ L V+
Sbjct: 249 GSENTLRVY 257
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 162 (62.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 59/210 (28%), Positives = 91/210 (43%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
L W T + + D + +D K I EH G V S ++ P L ASGS
Sbjct: 111 LHWS--TDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGV-VNSCCPARRGPPLVASGS 167
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD + +++D R G Q ++VC F L+ G D +D+R
Sbjct: 168 DDRSARIFDTRSKGS--THLFQHKYPVTSVC---FSDASDQLITGGI-DNVIRVWDIRNQ 221
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHVNN- 276
DP+ H+ T+T D L++ D K+W++ +R I+T+ G NN
Sbjct: 222 EDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNF 281
Query: 277 -RNFVGLSVWR-HGGLLGCGSETNQVFVYD 304
+N + S W G +GCGS QV+++D
Sbjct: 282 EKNLIKSS-WSIDGRRIGCGSSDRQVYIWD 310
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 153 (58.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD + GKC+ T+ P+ S V V F+ GS L+ + D +D
Sbjct: 146 SGSFDESVRIWDVKT--GKCLKTL-PAHS-DPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 200
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D V++++F + A T D LKLW+ + + ++TY GH N +
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Query: 279 --FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F SV G + GSE N V++++++ E V
Sbjct: 261 CIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEIV 294
Score = 140 (54.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGRR-VWSVDYSKGDPVL 157
+SS+K+ P +G L S D ++ + + K FE+ G + + V +S +L
Sbjct: 48 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLL 102
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S SDD T+++WD GKC+ T++ S CC F+P S+L+ +G D+ +
Sbjct: 103 -VSASDDKTLKIWD--VSSGKCLKTLK-GHSNYVFCC-NFNP-QSNLIVSGSFDESVRIW 156
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
DV K + H V+ + F D +V++ DG ++W+ + ++T
Sbjct: 157 DV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 191 AVCCVEFHPFGSSLVAAGCADK--KAY-AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
AV V+F P G L A+ ADK K + AYD K + GH+ ++ + + D +
Sbjct: 47 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYD-GKFEKTI---SGHKLGISDVAWSSDSNL 101
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETNQVFVYDV 305
LV+A D LK+W+V+ + ++T KGH N+V + L+ GS V ++DV
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGH---SNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 306 RWGE---PVWVHDFEPVTAAGSER 326
+ G+ + H +PV+A R
Sbjct: 159 KTGKCLKTLPAHS-DPVSAVHFNR 181
Score = 45 (20.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKS 73
F+P ++ +G +RI+++K+
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKT 160
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 153 (58.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD + GKC+ T+ P+ S V V F+ GS L+ + D +D
Sbjct: 146 SGSFDESVRIWDVKT--GKCLKTL-PAHS-DPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 200
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D V++++F + A T D LKLW+ + + ++TY GH N +
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Query: 279 --FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F SV G + GSE N V++++++ E V
Sbjct: 261 CIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEIV 294
Score = 140 (54.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGRR-VWSVDYSKGDPVL 157
+SS+K+ P +G L S D ++ + + K FE+ G + + V +S +L
Sbjct: 48 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLL 102
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S SDD T+++WD GKC+ T++ S CC F+P S+L+ +G D+ +
Sbjct: 103 -VSASDDKTLKIWD--VSSGKCLKTLK-GHSNYVFCC-NFNP-QSNLIVSGSFDESVRIW 156
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
DV K + H V+ + F D +V++ DG ++W+ + ++T
Sbjct: 157 DV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 191 AVCCVEFHPFGSSLVAAGCADK--KAY-AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
AV V+F P G L A+ ADK K + AYD K + GH+ ++ + + D +
Sbjct: 47 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYD-GKFEKTI---SGHKLGISDVAWSSDSNL 101
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETNQVFVYDV 305
LV+A D LK+W+V+ + ++T KGH N+V + L+ GS V ++DV
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGH---SNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 306 RWGE---PVWVHDFEPVTAAGSER 326
+ G+ + H +PV+A R
Sbjct: 159 KTGKCLKTLPAHS-DPVSAVHFNR 181
Score = 45 (20.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKS 73
F+P ++ +G +RI+++K+
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKT 160
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 153 (58.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD + GKC+ T+ P+ S V V F+ GS L+ + D +D
Sbjct: 146 SGSFDESVRIWDVKT--GKCLKTL-PAHS-DPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 200
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D V++++F + A T D LKLW+ + + ++TY GH N +
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Query: 279 --FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F SV G + GSE N V++++++ E V
Sbjct: 261 CIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEIV 294
Score = 140 (54.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGRR-VWSVDYSKGDPVL 157
+SS+K+ P +G L S D ++ + + K FE+ G + + V +S +L
Sbjct: 48 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLL 102
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S SDD T+++WD GKC+ T++ S CC F+P S+L+ +G D+ +
Sbjct: 103 -VSASDDKTLKIWD--VSSGKCLKTLK-GHSNYVFCC-NFNP-QSNLIVSGSFDESVRIW 156
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
DV K + H V+ + F D +V++ DG ++W+ + ++T
Sbjct: 157 DV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 191 AVCCVEFHPFGSSLVAAGCADK--KAY-AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
AV V+F P G L A+ ADK K + AYD K + GH+ ++ + + D +
Sbjct: 47 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYD-GKFEKTI---SGHKLGISDVAWSSDSNL 101
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETNQVFVYDV 305
LV+A D LK+W+V+ + ++T KGH N+V + L+ GS V ++DV
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGH---SNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 306 RWGE---PVWVHDFEPVTAAGSER 326
+ G+ + H +PV+A R
Sbjct: 159 KTGKCLKTLPAHS-DPVSAVHFNR 181
Score = 45 (20.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKS 73
F+P ++ +G +RI+++K+
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKT 160
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 153 (58.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD + GKC+ T+ P+ S V V F+ GS L+ + D +D
Sbjct: 146 SGSFDESVRIWDVKT--GKCLKTL-PAHS-DPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 200
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D V++++F + A T D LKLW+ + + ++TY GH N +
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Query: 279 --FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F SV G + GSE N V++++++ E V
Sbjct: 261 CIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEIV 294
Score = 140 (54.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGRR-VWSVDYSKGDPVL 157
+SS+K+ P +G L S D ++ + + K FE+ G + + V +S +L
Sbjct: 48 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLL 102
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S SDD T+++WD GKC+ T++ S CC F+P S+L+ +G D+ +
Sbjct: 103 -VSASDDKTLKIWD--VSSGKCLKTLK-GHSNYVFCC-NFNP-QSNLIVSGSFDESVRIW 156
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
DV K + H V+ + F D +V++ DG ++W+ + ++T
Sbjct: 157 DV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 191 AVCCVEFHPFGSSLVAAGCADK--KAY-AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
AV V+F P G L A+ ADK K + AYD K + GH+ ++ + + D +
Sbjct: 47 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYD-GKFEKTI---SGHKLGISDVAWSSDSNL 101
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETNQVFVYDV 305
LV+A D LK+W+V+ + ++T KGH N+V + L+ GS V ++DV
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGH---SNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 306 RWGE---PVWVHDFEPVTAAGSER 326
+ G+ + H +PV+A R
Sbjct: 159 KTGKCLKTLPAHS-DPVSAVHFNR 181
Score = 45 (20.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKS 73
F+P ++ +G +RI+++K+
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKT 160
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 153 (58.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 46/155 (29%), Positives = 77/155 (49%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD + GKC+ T+ P+ S V V F+ GS L+ + D +D
Sbjct: 146 SGSFDESVRIWDVKT--GKCLKTL-PAHS-DPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 200
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D V++++F + A T D LKLW+ + + ++TY GH N +
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 260
Query: 279 --FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F SV G + GSE N V++++++ E V
Sbjct: 261 CIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEIV 294
Score = 140 (54.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGRR-VWSVDYSKGDPVL 157
+SS+K+ P +G L S D ++ + + K FE+ G + + V +S +L
Sbjct: 48 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLL 102
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S SDD T+++WD GKC+ T++ S CC F+P S+L+ +G D+ +
Sbjct: 103 -VSASDDKTLKIWD--VSSGKCLKTLK-GHSNYVFCC-NFNP-QSNLIVSGSFDESVRIW 156
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
DV K + H V+ + F D +V++ DG ++W+ + ++T
Sbjct: 157 DV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 191 AVCCVEFHPFGSSLVAAGCADK--KAY-AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
AV V+F P G L A+ ADK K + AYD K + GH+ ++ + + D +
Sbjct: 47 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYD-GKFEKTI---SGHKLGISDVAWSSDSNL 101
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETNQVFVYDV 305
LV+A D LK+W+V+ + ++T KGH N+V + L+ GS V ++DV
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGH---SNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 306 RWGE---PVWVHDFEPVTAAGSER 326
+ G+ + H +PV+A R
Sbjct: 159 KTGKCLKTLPAHS-DPVSAVHFNR 181
Score = 45 (20.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKS 73
F+P ++ +G +RI+++K+
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKT 160
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 51/184 (27%), Positives = 90/184 (48%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+ +SSL T GR+L +G D V + + K + H + S+ S + ++
Sbjct: 21 SNVSSLVLGKST-GRLLATGGDDCRVNVWSVNKPNCVMSLTGHT-TPIESLQISAKEELI 78
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
A GS G++++WD + K + T+ ++ +C ++FHP+GS VA+G D +
Sbjct: 79 VA-GSQSGSIRVWD--LEAAKILRTLL--GHKANICSLDFHPYGS-FVASGSLDTDIKLW 132
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
DVR+ + + H + V +RF D L +A D +KLW++ +V+ + GH
Sbjct: 133 DVRRK-GCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP 191
Query: 277 RNFV 280
N V
Sbjct: 192 VNVV 195
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 165 (63.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 51/184 (27%), Positives = 90/184 (48%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+ +SSL T GR+L +G D V + + K + H + S+ S + ++
Sbjct: 21 SNVSSLVLGKST-GRLLATGGDDCRVNVWSVNKPNCVMSLTGHT-TPIESLQISAKEELI 78
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
A GS G++++WD + K + T+ ++ +C ++FHP+GS VA+G D +
Sbjct: 79 VA-GSQSGSIRVWD--LEAAKILRTLL--GHKANICSLDFHPYGS-FVASGSLDTDIKLW 132
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
DVR+ + + H + V +RF D L +A D +KLW++ +V+ + GH
Sbjct: 133 DVRRK-GCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGP 191
Query: 277 RNFV 280
N V
Sbjct: 192 VNVV 195
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 155 (59.6 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 46/149 (30%), Positives = 76/149 (51%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD GKC+ V P+ S V V+F+ GS L+ + D +D
Sbjct: 130 SGSFDETVRIWDVTT--GKCLK-VLPAHS-DPVTAVDFNRDGS-LIVSSSYDGLCRIWDS 184
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D V+++RF + GT D L+LWN++ ++ ++TY GHVN +
Sbjct: 185 GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQY 244
Query: 279 FVG--LSVWRHGGLLGCGSETNQVFVYDV 305
+ SV +G + GSE N V ++++
Sbjct: 245 CISSAFSV-TNGKRIVSGSEDNCVHMWEL 272
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/144 (31%), Positives = 67/144 (46%)
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV----FDGHRKTVTYIRFL-DVD 245
AV V+F G L+A+ ADK Y + + DP+ F GH ++ + F D
Sbjct: 26 AVSSVKFSSDGR-LLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDAR 84
Query: 246 TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+V+A D LKLW+V +I+T GH N V + ++ GS V ++DV
Sbjct: 85 FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP--QSNMIVSGSFDETVRIWDV 142
Query: 306 RWGEPVWV---HDFEPVTAAGSER 326
G+ + V H +PVTA R
Sbjct: 143 TTGKCLKVLPAHS-DPVTAVDFNR 165
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEK-KVPIFER-DEHGGRR--VWSVDYSKGDP 155
+SS+K+ + GR+L S D + Y + PI E E G + V +S D
Sbjct: 27 VSSVKFS--SDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSS-DA 83
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
S SDD T+++WD + G + T+ + CV F+P S+++ +G D+
Sbjct: 84 RFIVSASDDKTLKLWD--VETGSLIKTL--IGHTNYAFCVNFNP-QSNMIVSGSFDETVR 138
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
+DV + V H VT + F D +V++ DG ++W+ ++T
Sbjct: 139 IWDVTTG-KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Score = 41 (19.5 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 5/24 (20%), Positives = 14/24 (58%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNI 71
+ F+P ++ +G +RI+++
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDV 142
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 159 (61.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 65/224 (29%), Positives = 96/224 (42%)
Query: 125 EYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
++ +E+ P ER G R + SVD+S L ASGS D +++W + + V
Sbjct: 3 QHSVEED-PSLERHFRGHRDAITSVDFSLNKKQL-ASGSMDSCLKIWSMKPQM-RAYCLV 59
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL- 242
+ AV CV+F P G LVA+G DK + V + VF H TV + F
Sbjct: 60 ---GHKDAVMCVQFSPSGH-LVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSS 114
Query: 243 DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFV 302
D +LVTA D +K+W V+ + + + H+N S G L+ S+ V +
Sbjct: 115 DGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSP--DGRLIASASDDKTVKL 172
Query: 303 YDVRWGEPVWVHDF-EPVTAAGSERGFVSSVCWRRVGEDECTLV 345
+D E +H F E A S C G D+ V
Sbjct: 173 WDKTSRE--CIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKV 214
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 65/252 (25%), Positives = 110/252 (43%)
Query: 110 SGRVLGSGDYDGVVMEY--DLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
SG ++ SG D V + ++ + +F+ H V SV +S L + SDD T+
Sbjct: 73 SGHLVASGSRDKTVCLWVPSVKGESTVFKA--HTAT-VRSVHFSSDGQSL-VTASDDKTI 128
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W K + ++ S + V C F P G L+A+ DK +D + + +
Sbjct: 129 KVWTVHRQ--KFLFSL--SQHINWVRCARFSPDGR-LIASASDDKTVKLWD-KTSRECIH 182
Query: 228 VFDGHRKTVTYIRFLDVDTLVTA-GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
F H ++ F T + A GTD +K+W+V +R+++ Y+ H N LS
Sbjct: 183 SFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVN--SLSFHP 240
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVW-VHDFE-PVTA-AGSERG--FVSSVCWRRVGEDE 341
G L S + + + D+ G ++ +H + P T A S G F S +V +
Sbjct: 241 SGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK 300
Query: 342 CTLVAGGSDGLL 353
A DG+L
Sbjct: 301 TNFSAADYDGVL 312
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 160 (61.4 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 71/273 (26%), Positives = 116/273 (42%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYY-ICTPAK--LSSLK 104
+ FDP+ A+G + R I ++N C+ Y I + K + L+
Sbjct: 72 VRFDPTAQHIASGSMDRSILLWNTYGQ---------------CENYGILSGHKGAILDLQ 116
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W + + S D + +D+E I H + SV+ SK + S SDD
Sbjct: 117 WS--RDSKTIFSASADMTLASWDIESGQRIRRYIGHE-EVINSVEISKRGQEMLVSASDD 173
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
GTM +WDPR + + ++ +AV E G+ + + G D + +D+RK
Sbjct: 174 GTMGIWDPRQK--EAIDYLETELPITAVAQSEA---GNEVFSGGI-DNAIHVWDIRKKAI 227
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGH-VN-NR 277
V GH T+T + D TL++ D ++ W++ +R IRTY G V +
Sbjct: 228 -VYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEK 286
Query: 278 NFVGLSVWRHGG-LLGCGSETNQVFVYDVRWGE 309
N + S W G + GS V V+D + G+
Sbjct: 287 NLIRAS-WNPAGDKIAAGSGDRSVVVWDFKTGK 318
Score = 125 (49.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 54/211 (25%), Positives = 93/211 (44%)
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
V+ +SG D GT+ PR G ++ + V V F P +A+G D+
Sbjct: 35 VVKSSGQD-GTLVQAVPRTSGLNA-PIMELTGHSGEVFAVRFDPTAQH-IASGSMDRSIL 91
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
++ + + GH+ + +++ D T+ +A D L W++ + IR Y GH
Sbjct: 92 LWNTYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHE 151
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE-PVTA-AGSERGFVSSV 332
N V +S R +L S+ + ++D R E + + E P+TA A SE G
Sbjct: 152 EVINSVEISK-RGQEMLVSASDDGTMGIWDPRQKEAIDYLETELPITAVAQSEAG----- 205
Query: 333 CWRRVGEDECTLVAGGSDGLLHVFVGKKKPL 363
+E + +GG D +HV+ +KK +
Sbjct: 206 -------NE--VFSGGIDNAIHVWDIRKKAI 227
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 52/164 (31%), Positives = 79/164 (48%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSS 203
VW +D S + ASGS D T ++W D ++ A A V CV+FHP S+
Sbjct: 387 VWDLDISPYS-LYFASGSHDRTARLWS--FDR---TYPLRIYAGHLADVDCVKFHP-NSN 439
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+A G DK + ++ + V +F GHR V + F + L +AG D LKLW++
Sbjct: 440 YLATGSTDKTVRLWSAQQG-NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ + +GH +N L+ GL+ S N V V+D+R
Sbjct: 499 SGTLYKELRGHTDN--ITSLTFSPDSGLIASASMDNSVRVWDIR 540
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 49/187 (26%), Positives = 87/187 (46%)
Query: 102 SLKWKPGTSGR-VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S ++ P TS R V GSGD+ + +D + + PI H V V ++ ++ A+
Sbjct: 139 SAQFSPSTSSRLVTGSGDFTARL--WDCDTQTPIATMKGHTNW-VSCVAWAPDASII-AT 194
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASR-SAVCCVEFH--P-FGSSLVAAGCADKKAYA 216
GS D T++ WDP+ G ++ A+C H P G L+A+G D
Sbjct: 195 GSMDNTIRFWDPK-KGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRI 253
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
++V K+ + GH +T +R+ + + ++ D +++W+ D + + KGH
Sbjct: 254 WNV-KLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAAR 312
Query: 277 RNFVGLS 283
N + LS
Sbjct: 313 VNHLSLS 319
Score = 105 (42.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 32/108 (29%), Positives = 49/108 (45%)
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
G LV+A D + +D +K P+ GH+K V + F D + TA D ++LW
Sbjct: 358 GERLVSAS-DDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLW 416
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGG-LLGCGSETNQVFVYDVR 306
+ + + T +GHV V W LL S+ + V+DVR
Sbjct: 417 DGKTGKFLATLRGHVAA---VYQCAWSTDSRLLVSSSQDTTLKVWDVR 461
Score = 70 (29.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 31/146 (21%), Positives = 61/146 (41%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYIC-TPAKLSSL 103
+ + + P S+ ATG + IR ++ K + +C P L+
Sbjct: 180 VSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMA---LCWQPLHLA-- 234
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
P + +L SG D V ++++ + +F H + V + + + S S
Sbjct: 235 ---PDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAP-ITCVRWGGQNWIY--SSSY 288
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASR 189
D T+++WD + GKC+ ++ A+R
Sbjct: 289 DKTIRIWDAK--DGKCLHILKGHAAR 312
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 52/164 (31%), Positives = 79/164 (48%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSS 203
VW VD S + ASGS D T ++W D ++ A A V CV+FHP S+
Sbjct: 387 VWDVDISPFS-LYFASGSHDRTARLWS--FDR---TYPLRIYAGHLADVDCVKFHP-NSN 439
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+A G DK + ++ + V +F GHR V + F + L +AG D LKLW++
Sbjct: 440 YLATGSTDKTVRLWSAQQG-NSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLA 498
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ + +GH ++ L+ GL+ S N V V+D+R
Sbjct: 499 SGTLFKELRGHTDS--ITSLAFSPDSGLIASASMDNSVRVWDIR 540
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 148 (57.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 41/129 (31%), Positives = 66/129 (51%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
SV + D +L A+GS D T ++W PRC + + T S R + CV+F P L
Sbjct: 484 SVAVAPNDKLL-ATGSQDRTAKLWALPRC---QLLGTF--SGHRRGLWCVQFSPMDQVLA 537
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDS 264
A AD + ++ + F+GH +V + F+ T L+++G+DG LKLW + ++
Sbjct: 538 TAS-ADGTIKLWALQDF-SCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNN 595
Query: 265 RVIRTYKGH 273
+RT H
Sbjct: 596 ECVRTLDAH 604
Score = 110 (43.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 41/149 (27%), Positives = 67/149 (44%)
Query: 160 SGSDDGTMQMWD-PRC--------DGGKCVSTVQPS--ASRSAVCCVEFHPFGSSLVAAG 208
+GS D T+++W P +GG Q + + V P L+A G
Sbjct: 439 TGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAVAP-NDKLLATG 497
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVI 267
D+ A + + + + F GHR+ + ++F +D L TA DG +KLW + D +
Sbjct: 498 SQDRTAKLWALPRC-QLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL 556
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
+T++GH + V V R LL GS+
Sbjct: 557 KTFEGHDASVLKVAF-VSRGTQLLSSGSD 584
Score = 57 (25.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNI 71
+ + FDP+ ++ ATGG +R++++
Sbjct: 112 VATMAFDPTSTLLATGGCDGAVRVWDV 138
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 148 (57.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 41/129 (31%), Positives = 66/129 (51%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
SV + D +L A+GS D T ++W PRC + + T S R + CV+F P L
Sbjct: 484 SVAVAPNDKLL-ATGSQDRTAKLWALPRC---QLLGTF--SGHRRGLWCVQFSPMDQVLA 537
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDS 264
A AD + ++ + F+GH +V + F+ T L+++G+DG LKLW + ++
Sbjct: 538 TAS-ADGTIKLWALQDF-SCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNN 595
Query: 265 RVIRTYKGH 273
+RT H
Sbjct: 596 ECVRTLDAH 604
Score = 110 (43.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 41/149 (27%), Positives = 67/149 (44%)
Query: 160 SGSDDGTMQMWD-PRC--------DGGKCVSTVQPS--ASRSAVCCVEFHPFGSSLVAAG 208
+GS D T+++W P +GG Q + + V P L+A G
Sbjct: 439 TGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAVAP-NDKLLATG 497
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVI 267
D+ A + + + + F GHR+ + ++F +D L TA DG +KLW + D +
Sbjct: 498 SQDRTAKLWALPRC-QLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL 556
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
+T++GH + V V R LL GS+
Sbjct: 557 KTFEGHDASVLKVAF-VSRGTQLLSSGSD 584
Score = 57 (25.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNI 71
+ + FDP+ ++ ATGG +R++++
Sbjct: 112 VATMAFDPTSTLLATGGCDGAVRVWDV 138
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 52/164 (31%), Positives = 78/164 (47%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSS 203
VW VD S + ASGS D T ++W D ++ A A V CV+FHP S+
Sbjct: 387 VWDVDISPYS-LYFASGSHDRTARLWS--FDR---TYPLRIYAGHLADVDCVKFHP-NSN 439
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+A G DK + ++ + V +F GHR V + F + L +AG D LKLW++
Sbjct: 440 YLATGSTDKTVRLWSAQQG-NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 498
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ + +GH +N L+ L+ S N V V+D+R
Sbjct: 499 SGTLFKELRGHTDN--ITSLTFSPDSSLIASASMDNSVRVWDIR 540
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 145 (56.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 45/155 (29%), Positives = 76/155 (49%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD + GKC+ T+ P+ S V V F+ GS L+ + D +D
Sbjct: 146 SGSFDESVRIWDVKT--GKCLKTL-PAHS-DPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 200
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D V++++F + A T D LKLW+ + + ++TY H N +
Sbjct: 201 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKY 260
Query: 279 --FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F SV G + GSE N V++++++ E V
Sbjct: 261 CIFANFSV-TGGKWIVSGSEDNLVYIWNLQTKEVV 294
Score = 140 (54.3 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 47/173 (27%), Positives = 84/173 (48%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGRR-VWSVDYSKGDPVL 157
+SS+K+ P +G L S D ++ + + K FE+ G + + V +S +L
Sbjct: 48 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLL 102
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S SDD T+++WD GKC+ T++ S CC F+P S+L+ +G D+ +
Sbjct: 103 -VSASDDKTLKIWD--VSSGKCLKTLK-GHSNYVFCC-NFNP-QSNLIVSGSFDESVRIW 156
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
DV K + H V+ + F D +V++ DG ++W+ + ++T
Sbjct: 157 DV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 191 AVCCVEFHPFGSSLVAAGCADK--KAY-AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
AV V+F P G L A+ ADK K + AYD K + GH+ ++ + + D +
Sbjct: 47 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYD-GKFEKTI---SGHKLGISDVAWSSDSNL 101
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETNQVFVYDV 305
LV+A D LK+W+V+ + ++T KGH N+V + L+ GS V ++DV
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGH---SNYVFCCNFNPQSNLIVSGSFDESVRIWDV 158
Query: 306 RWGE---PVWVHDFEPVTAAGSER 326
+ G+ + H +PV+A R
Sbjct: 159 KTGKCLKTLPAHS-DPVSAVHFNR 181
Score = 45 (20.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKS 73
F+P ++ +G +RI+++K+
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKT 160
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 157 (60.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 55/197 (27%), Positives = 86/197 (43%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+ L SG D V + ++ + H VW V +S A+ S D T ++W
Sbjct: 538 KYLLSGSEDKTVRLWSMDTHTALVSYKGHN-HPVWDVSFSPLGHYF-ATASHDQTARLWS 595
Query: 172 PRCDGGKCVSTVQPSASR-SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
CD + ++ A + V CV FHP G V G +DK +DV D V +F
Sbjct: 596 --CDH---IYPLRIFAGHLNDVDCVSFHPNGC-YVFTGSSDKTCRMWDV-STGDSVRLFL 648
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V I D L T DG + +W++ + ++ +GH N + LS + G
Sbjct: 649 GHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIY-SLSYSKEGN 707
Query: 290 LLGCGSETNQVFVYDVR 306
+L G + V V+D++
Sbjct: 708 VLISGGADHTVRVWDLK 724
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 54/222 (24%), Positives = 93/222 (41%)
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H G V+S +S + L SGS+D T+++W + V V V F P
Sbjct: 524 HSGT-VYSTSFSPDNKYL-LSGSEDKTVRLWSMDTH----TALVSYKGHNHPVWDVSFSP 577
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKL 258
G A D+ A + + P+ +F GH V + F V T +D ++
Sbjct: 578 LGHYFATAS-HDQTARLWSCDHIY-PLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRM 635
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
W+V+ +R + GH + ++V G L GSE + V+D+ G+ +
Sbjct: 636 WDVSTGDSVRLFLGHT--APVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRL------- 686
Query: 319 VTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
G + + S+ + + G L++GG+D + V+ KK
Sbjct: 687 KQMRGHGKNAIYSLSYSKEGN---VLISGGADHTVRVWDLKK 725
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 151 (58.2 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 46/158 (29%), Positives = 79/158 (50%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L SGS D ++++WD R G CV T+ P+ S V V F+ GS L+ +G D
Sbjct: 177 LVVSGSFDESVRIWDVRT--GMCVKTL-PAHS-DPVSAVSFNRDGS-LITSGSYDGLVRI 231
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+D + D V +++F + ++++ D LKLW+ + ++ Y+GH N
Sbjct: 232 WDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHEN 291
Query: 276 NRN--FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
N+ F SV G + GSE +++V++++ E V
Sbjct: 292 NKYCIFANFSV-TGGKWIISGSEDCKIYVWNLQTKEVV 328
Score = 116 (45.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 40/163 (24%), Positives = 75/163 (46%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SG +D V +D+ + + H V +V +++ D L SGS DG +++WD
Sbjct: 180 SGSFDESVRIWDVRTGMCVKTLPAHSDP-VSAVSFNR-DGSLITSGSYDGLVRIWDTA-- 235
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
G+CV T+ + V V+F P G ++++ D +D K + + GH
Sbjct: 236 NGQCVKTLVDDEN-PPVAFVKFSPNGKYILSSNL-DNTLKLWDFGKG-KTLKQYQGHENN 292
Query: 236 VTYIRFLDVDTL----VTAGTDGC-LKLWNVNDSRVIRTYKGH 273
Y F + + +G++ C + +WN+ V+++ +GH
Sbjct: 293 -KYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGH 334
Score = 39 (18.8 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNI 71
I ++F P T + ++I+N+
Sbjct: 82 ISAVKFSPCGKFLGTSSADKTVKIWNM 108
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 155 (59.6 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 53/172 (30%), Positives = 76/172 (44%)
Query: 151 SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA 210
+ GD +L AS DD D R C +V+P S+ AV +EFHP G + G A
Sbjct: 303 ASGDYILSAS--DDSYWAFSDIRSGKSLCKVSVEPG-SQIAVHSIEFHPDGL-IFGTGAA 358
Query: 211 DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRT 269
D +D++ F GH V I F + L T DG +KLW++ + ++T
Sbjct: 359 DAVVKIWDLKNQT-VAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKT 417
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE-PVT 320
+ + LS G LG G + QV ++ W E V + D PVT
Sbjct: 418 FANE-EKQPINSLSFDMTGTFLGIGGQKVQV-LHVKSWSEVVSLSDHSGPVT 467
Score = 122 (48.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 48/201 (23%), Positives = 90/201 (44%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + +G D V+ YD EK+ + + + +++ +V D + S S D +++W
Sbjct: 221 GNLSLTGGIDKTVVLYDYEKE-QVMQTFKGHNKKINAVVLHP-DNITAISASADSHIRVW 278
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY-DVR--KMVDPVL 227
K + V ++ V + + G +++A +D +A+ D+R K + V
Sbjct: 279 SATDSSSKAIIDVH----QAPVTDISLNASGDYILSA--SDDSYWAFSDIRSGKSLCKVS 332
Query: 228 VFDGHRKTVTYIRFLDVDTLV--TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
V G + V I F D L+ T D +K+W++ + V + GH + S
Sbjct: 333 VEPGSQIAVHSIEF-HPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFS-- 389
Query: 286 RHGGLLGCGSETNQVFVYDVR 306
+G L GSE +V ++D+R
Sbjct: 390 ENGYYLATGSEDGEVKLWDLR 410
Score = 38 (18.4 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 46 GVIEFDPSDSVFATGGIARKIRIYN 70
G+ D ++ TGGI + + +Y+
Sbjct: 213 GITALDIKGNLSLTGGIDKTVVLYD 237
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 154 (59.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSS 203
VW +D S + ASGS D T ++W D ++ A A V CV+FHP S+
Sbjct: 405 VWDLDISPYS-LYFASGSHDRTARLWS--FDR---TYPLRIYAGHLADVDCVKFHP-NSN 457
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+A G DK + ++ + V +F GHR V + F + L +AG D LKLW++
Sbjct: 458 YLATGSTDKTVRLWSAQQG-NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 516
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ + +GH +N L+ L+ S N V V+D+R
Sbjct: 517 SGTLYKELRGHTDN--ITSLTFSPDSSLIASASMDNSVRVWDIR 558
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 50/195 (25%), Positives = 87/195 (44%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++ + W P SGR LG+ YD +DLE + I ++ H V+ + + + D L
Sbjct: 324 RVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQ-DGSLA 379
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+G D ++WD R G+C+ ++ + + F P G +A G D +D
Sbjct: 380 GTGGLDAFGRVWDLRT--GRCIMFLEGHLKE--IYGISFSPNGYH-IATGSGDNTCKVWD 434
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+R+ V H+ VT ++F + D L+T D K+W ++T GH
Sbjct: 435 LRQR-RCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 493
Query: 277 RNFVGLSVWRHGGLL 291
+GL + G L+
Sbjct: 494 --VMGLDISSDGQLI 506
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 41/149 (27%), Positives = 70/149 (46%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G L C D+ +D
Sbjct: 296 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGRFL-GTTCYDRSWRLWD 350
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 351 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 407
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G+S +G + GS N V+D+R
Sbjct: 408 EIYGISFSPNGYHIATGSGDNTCKVWDLR 436
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 50/195 (25%), Positives = 87/195 (44%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++ + W P SGR LG+ YD +DLE + I ++ H V+ + + + D L
Sbjct: 324 RVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQ-DGSLA 379
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+G D ++WD R G+C+ ++ + + F P G +A G D +D
Sbjct: 380 GTGGLDAFGRVWDLRT--GRCIMFLEGHLKE--IYGINFSPNGYH-IATGSGDNTCKVWD 434
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+R+ V H+ VT ++F + D L+T D K+W ++T GH
Sbjct: 435 LRQR-RCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 493
Query: 277 RNFVGLSVWRHGGLL 291
+GL + G L+
Sbjct: 494 --VMGLDISSDGQLI 506
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 40/149 (26%), Positives = 70/149 (46%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G L C D+ +D
Sbjct: 296 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGRFL-GTTCYDRSWRLWD 350
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 351 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 407
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 408 EIYGINFSPNGYHIATGSGDNTCKVWDLR 436
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 152 (58.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
++ + + P S V S D G + ++ + HG V +VD+ +L
Sbjct: 166 EVRDVAFSPNDSKFVTASDD--GSLKVWNFHMSTEELKLTGHGWD-VKTVDWHPSKGLL- 221
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP-FGSSLVAAGCADKKAYAY 217
ASGS D ++ WDPR G C++T+ ++ + F FGS+ +A D +
Sbjct: 222 ASGSKDNLVKFWDPRT--GTCIATLH--GHKNTIMQASFQKNFGSNYLATVSRDSTCRVF 277
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
D+R M D V V GH K V + + L + L T G+DG + +++++ ++ K H
Sbjct: 278 DLRAMKD-VRVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSVNHYSLDEPPLLSQQKYHEK 336
Query: 276 NRNFVGLS 283
+ N V LS
Sbjct: 337 HPN-VTLS 343
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 148 (57.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 245
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 246 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 296
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 --TLFAGYTDNLVRVW 310
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 148 (57.2 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 66/256 (25%), Positives = 113/256 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 76 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 133
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 134 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 190
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGLS 283
+ G+ TVT D + G DG LW++N+ + + T G +N F
Sbjct: 191 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 248
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV-TAAGSERGFVSSVCWRRVGED 340
W C + + ++D+ G+ + V + E + T++ +E +S+ W G+
Sbjct: 249 YWL------CAATGPSIKIWDLE-GKII-VDELKQEVISTSSKAEPPQCTSLAWSADGQ- 299
Query: 341 ECTLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 300 --TLFAGYTDNLVRVW 313
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 148 (57.2 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 50/173 (28%), Positives = 83/173 (47%)
Query: 142 GRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG 201
G V SV S+ L SGSDD T+++WD R T++ +AVC F G
Sbjct: 140 GNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKK--HAAHTLESPFQVTAVC---FGDTG 194
Query: 202 SSLVAAGCADKKAYAYDVRKMVDPVLV-FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
+++ G D + +D+RK VL GH T+T + + D ++T D L++W
Sbjct: 195 EQVISGGI-DNEVKIWDIRKQA--VLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVW 251
Query: 260 NVND----SRVIRTYKGHVNN--RNFVGLSVWRHGG-LLGCGSETNQVFVYDV 305
+V R ++ ++GH +N +N + + W G + GS V+++DV
Sbjct: 252 DVRPYAPGERCVKVFQGHQHNFEKNLLRCA-WSPGSDKITSGSADRHVYIWDV 303
Score = 139 (54.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 49/181 (27%), Positives = 80/181 (44%)
Query: 183 VQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL 242
+Q + EFHP G L+++G D++ Y + V + + V+ GH V F
Sbjct: 49 MQLEGHEGEIFTAEFHPEGELLLSSGF-DRQIYIWQVYEDCENVMAMSGHSGAVMEAHFT 107
Query: 243 -DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGC-GSETNQV 300
D + T TD L W++ + R +KGH N N V S R G L C GS+ +
Sbjct: 108 PDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGS--RRGQQLLCSGSDDRTI 165
Query: 301 FVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
++D R H E V++VC+ GE +++GG D + ++ +K
Sbjct: 166 KIWDARKKHAA--HTLESPFQ-------VTAVCFGDTGEQ---VISGGIDNEVKIWDIRK 213
Query: 361 K 361
+
Sbjct: 214 Q 214
Score = 118 (46.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 42/164 (25%), Positives = 77/164 (46%)
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGT 166
G +G + SG D V +D+ K+ + H + + S +GD +L + + D T
Sbjct: 191 GDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDT-ITGMSLSPEGDFIL--TNAMDNT 247
Query: 167 MQMWD--PRCDGGKCVSTVQP---SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+++WD P G +CV Q + ++ + C + P GS + +G AD+ Y +DV
Sbjct: 248 LRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCA-WSP-GSDKITSGSADRHVYIWDVNT 305
Query: 222 MVDPVLV-FDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
+L GH +V + F + L+ +G+ D L L +++
Sbjct: 306 R--RILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEIDE 347
Score = 38 (18.4 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 49 EFDPSDSVFATGGIARKIRIYNI 71
EF P + + G R+I I+ +
Sbjct: 62 EFHPEGELLLSSGFDRQIYIWQV 84
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 148 (57.2 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 68/251 (27%), Positives = 102/251 (40%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK--GDPVLGASGSDDGTM 167
SG +G YD +D + + H V+++ ++ GD V A+GS D T
Sbjct: 103 SGSCFITGSYDRTCKIWDTASGEELHTLEGHRNV-VYAIAFNNPYGDKV--ATGSFDKTC 159
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W + GKC T + + + C+ F+P S+LVA G D A +DV + V
Sbjct: 160 KLWS--AETGKCFYTFRGHTAE--IVCLAFNP-QSTLVATGSMDTTAKLWDVESG-EEVS 213
Query: 228 VFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH + + F D LVT D LW+V R + GH + V + W
Sbjct: 214 TLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFN-W- 271
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVA 346
L+ S V+D G+ + T G V VC+ G+ L+A
Sbjct: 272 DCSLIATASLDKSCKVWDAEGGQCL-------ATLLG-HNDEVLDVCFNYTGQ----LIA 319
Query: 347 GGS-DGLLHVF 356
S DG VF
Sbjct: 320 TASADGTSRVF 330
Score = 41 (19.5 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS 73
+ F+ S S F TG R +I++ S
Sbjct: 98 VAFNKSGSCFITGSYDRTCKIWDTAS 123
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 51/186 (27%), Positives = 90/186 (48%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR--VWSVDYSKGDP 155
+ +SSL T GR+L +G D V + + + D G + S+ S +
Sbjct: 21 SNVSSLVLGKST-GRLLATGGDDCRVNVWSVAQ----LRHDLLTGHTTPIESLQISAKEE 75
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
++ A GS G++++WD + K + T+ ++ +C ++FHP+GS VA+G D
Sbjct: 76 LIVA-GSQSGSIRVWD--LEAAKILRTLL--GHKANICSLDFHPYGS-FVASGSLDTDIK 129
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+DVR+ + + H + V +RF D L +A D +KLW++ +V+ + GH
Sbjct: 130 LWDVRRK-GCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHY 188
Query: 275 NNRNFV 280
N V
Sbjct: 189 GPVNVV 194
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 67/248 (27%), Positives = 108/248 (43%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
TS +L GD D V + + K H V SV ++ + VL +G+ G ++
Sbjct: 27 TSRLLLTGGD-DYKVNLWSIGKTTSPMSLCGHTSP-VDSVAFNS-EEVLVLAGASSGVIK 83
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V + RS VEFHPFG L A+G +D +D RK +
Sbjct: 84 LWD--LEESKMVRAF--TGHRSNCSAVEFHPFGEFL-ASGSSDTNLRVWDTRKK-GCIQT 137
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH---VNNRNFVGLSV 284
+ GH + ++ I F D +V+ G D +K+W++ +++ +K H + + +F L
Sbjct: 138 YKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEF 197
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTL 344
LL GS V +D+ FE + E V ++ + G+ TL
Sbjct: 198 -----LLATGSADRTVKFWDLE--------TFELIGTTRPEATGVRAIAFHPDGQ---TL 241
Query: 345 VAGGSDGL 352
G DGL
Sbjct: 242 FCGLDDGL 249
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 44/166 (26%), Positives = 78/166 (46%)
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
V C+ S L+ G D K + + K P+ + GH V + F + LV AG
Sbjct: 18 VNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLC-GHTSPVDSVAFNSEEVLVLAG 76
Query: 252 -TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
+ G +KLW++ +S+++R + GH +N + V + G L GS + V+D R +
Sbjct: 77 ASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF--GEFLASGSSDTNLRVWDTR--KK 132
Query: 311 VWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ ++ G RG +S++ D +V+GG D ++ V+
Sbjct: 133 GCIQTYK-----GHTRG-ISTI---EFSPDGRWVVSGGLDNVVKVW 169
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 145 (56.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/165 (30%), Positives = 76/165 (46%)
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
V+ S D T++ W+ G C T+Q S S+ V +E L AG +
Sbjct: 3 VILVSAGYDHTIRFWEALT--GVCSRTIQHSDSQ--VNRLEITNDKKLLATAG--HQNVR 56
Query: 216 AYDVRKM-VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
YD+R +PV F+GHR VT + F D +VT+ DG +K+W+V + R YK H
Sbjct: 57 LYDIRTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYK-H 115
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
N V + G L+ C + N + ++D+ GE H P
Sbjct: 116 NAPVNEVVIHP-NQGELISCDRDGN-IRIWDL--GENQCTHQLTP 156
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/163 (29%), Positives = 75/163 (46%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VW VD S + ++ S D T ++W + + S V CV+FHP S+
Sbjct: 399 VWDVDVSPCS-LYFSTASHDRTARLWS----FARTYPLRLYAGHLSDVDCVKFHP-NSNY 452
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A G DK + R+ V +F GHR V + F + L +AG D LKLW++
Sbjct: 453 IATGSTDKTVRLWSTRQGAS-VRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLAS 511
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ + +GH + + LS + L+ S N V V+D+R
Sbjct: 512 GGLFKDLRGHTDTIS--SLSFSQDSSLVASASMDNTVRVWDIR 552
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 145 (56.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 65/254 (25%), Positives = 113/254 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 73 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSADNRQI-VSGSRDKTIK 130
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C T+Q + V CV F P S+ + C DK +++ K+
Sbjct: 131 LWNTL---GVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTN 187
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+ G+ TVT D + G DG LW++N+ + + T G + N + S
Sbjct: 188 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DTINALCFSPN 244
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP---VTAAGSERGFVSSVCWRRVGEDEC 342
R+ L C + + ++D+ G+ + V + T + +E +S+ W G+
Sbjct: 245 RYW-L--CAATGPSIKIWDLE-GKII-VDELRQDIITTNSKAEPPQCTSLAWSADGQ--- 296
Query: 343 TLVAGGSDGLLHVF 356
TL AG +D L+ V+
Sbjct: 297 TLFAGYTDNLIRVW 310
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 65/226 (28%), Positives = 96/226 (42%)
Query: 133 PIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
P ER G R V VD+S L ASGS D T+ +W + + + + A
Sbjct: 9 PSLERHFKGHRDAVTCVDFSLNTKHL-ASGSMDSTLMIWHMKPQS----RAYRFTGHKDA 63
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V CV F P G L+A+G DK + V + VF H TV + F D +LVTA
Sbjct: 64 VTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTA 121
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
D +K+W+ + R + + H+N S G L+ S+ V ++D E
Sbjct: 122 SDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP--DGRLIVSASDDKTVKLWDKTSRE- 178
Query: 311 VWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+H + GFV+ V + G C + A G D + V+
Sbjct: 179 -CIHSY------CEHGGFVTYVDFHPSGT--C-IAAAGMDNTVKVW 214
Score = 129 (50.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 52/197 (26%), Positives = 83/197 (42%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ L + D V + ++ +F +H V +S D L S SDD T++
Sbjct: 113 SDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINW-VRCAKFSP-DGRLIVSASDDKTVK 170
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD +C+ + V V+FHP G+ + AAG D +D R +L
Sbjct: 171 LWDKT--SRECIHSYCEHGG--FVTYVDFHPSGTCIAAAGM-DNTVKVWDAR--THRLLQ 223
Query: 229 -FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+ H V + F L+TA +D LK+ ++ + R++ T GH V S R
Sbjct: 224 HYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS--R 281
Query: 287 HGGLLGCGSETNQVFVY 303
G G QV V+
Sbjct: 282 TGEYFASGGSDEQVMVW 298
Score = 43 (20.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 48 IEFDPSDSVFATGGIARKIRIY--NIK 72
+ F PS + A+G + +RI+ N+K
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVK 93
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 136 (52.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
SV + D +L A+GS D T ++W P+C + + S R + CV+F P L
Sbjct: 373 SVAIAPNDKLL-ATGSQDRTAKLWALPQC---QLLGVF--SGHRRGLWCVQFSPMDQVLA 426
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDS 264
A AD + ++ + F+GH +V + F+ T L+++G+DG +KLW + ++
Sbjct: 427 TAS-ADGTIKLWALQDF-SCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNN 484
Query: 265 RVIRTYKGH 273
+RT H
Sbjct: 485 ECVRTLDAH 493
Score = 123 (48.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 58/224 (25%), Positives = 101/224 (45%)
Query: 91 DYYICTPAKLSSLK-WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFER-DEHGGRRVWSV 148
D ++ + LK ++ TS + G D +V+ D+ +K +F + R+W +
Sbjct: 255 DSHVVVASNSPCLKVFELQTSACQILHGHTD-IVLALDVFRKGWLFASCAKDQSVRIWRM 313
Query: 149 DYSKGDPVLGAS----GSDDGTMQMWD-PRC--------DGGKCVSTVQPS--ASRSAVC 193
+ + G +L S GS D T+++W P+ D G + Q + +
Sbjct: 314 NKA-GQVMLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDIN 372
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGT 252
V P L+A G D+ A + + + + VF GHR+ + ++F +D L TA
Sbjct: 373 SVAIAP-NDKLLATGSQDRTAKLWALPQC-QLLGVFSGHRRGLWCVQFSPMDQVLATASA 430
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
DG +KLW + D ++T++GH + V V R LL GS+
Sbjct: 431 DGTIKLWALQDFSCLKTFEGHDASVLKVAF-VSRGTQLLSSGSD 473
Score = 107 (42.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 51/205 (24%), Positives = 84/205 (40%)
Query: 111 GRVLGSGDYDGVVMEYDLE-----KKVPIFERDEHG---GRRVWSVDYSKGDPVLGASGS 162
G + S D + + +DL+ + VP+FE E S K + +
Sbjct: 115 GHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAG 174
Query: 163 DDGTMQMWDPRCDGGKCVST-VQPSA-SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
D GT+++W+ G+CV T QP + C H G L A AD Y+ R
Sbjct: 175 DQGTLRVWEAA--SGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTAT--ADHNLLLYEAR 230
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDT--LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ F G+ + V +RFL + +V A CLK++ + S + GH +
Sbjct: 231 SL-RLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFELQTS-ACQILHGHTDI-- 286
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVY 303
+ L V+R G L ++ V ++
Sbjct: 287 VLALDVFRKGWLFASCAKDQSVRIW 311
Score = 58 (25.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNI 71
+ + FDP+ ++ ATGG +R+++I
Sbjct: 20 VATMAFDPTSTLLATGGCDGAVRVWDI 46
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 57/192 (29%), Positives = 87/192 (45%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
VL +G D + + ++K ++ H G VW+ S+ + SGS D T+++W
Sbjct: 268 VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGG-VWTSQISQCGRYI-VSGSTDRTVKVWST 325
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
DG + T+Q S V C+ GS LV G D +DV + GH
Sbjct: 326 -VDGS-LLHTLQ--GHTSTVRCMAMA--GSILVT-GSRDTTLRVWDVESGRH-LATLHGH 377
Query: 233 RKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
V ++F D T+V+ G D +K+WN + R IRT GH NNR + L ++
Sbjct: 378 HAAVRCVQF-DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGH-NNRVY-SLLFESERSIVC 434
Query: 293 CGSETNQVFVYD 304
GS + V+D
Sbjct: 435 SGSLDTSIRVWD 446
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 51/194 (26%), Positives = 90/194 (46%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + SG YD V ++ I H R V+S+ + ++ SGS D ++++W
Sbjct: 388 GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNR-VYSLLFESERSIV-CSGSLDTSIRVW 445
Query: 171 D-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D R +G +CV+ +Q S ++ + G+ LV+ AD +D+ + V +
Sbjct: 446 DFTRPEGQECVALLQGHTSLTSGMQLR----GNILVSCN-ADSHVRVWDIHEGTC-VHML 499
Query: 230 DGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR--- 286
GHR +T +++ + + T+ DG +KLW++ +IR + N G +WR
Sbjct: 500 SGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGN--GGCIWRLCS 557
Query: 287 HGGLLGC--GSETN 298
+L C GS N
Sbjct: 558 TSTMLACAVGSRNN 571
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 149 (57.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 57/192 (29%), Positives = 87/192 (45%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
VL +G D + + ++K ++ H G VW+ S+ + SGS D T+++W
Sbjct: 268 VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGG-VWTSQISQCGRYI-VSGSTDRTVKVWST 325
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
DG + T+Q S V C+ GS LV G D +DV + GH
Sbjct: 326 -VDGS-LLHTLQ--GHTSTVRCMAMA--GSILVT-GSRDTTLRVWDVESGRH-LATLHGH 377
Query: 233 RKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
V ++F D T+V+ G D +K+WN + R IRT GH NNR + L ++
Sbjct: 378 HAAVRCVQF-DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGH-NNRVY-SLLFESERSIVC 434
Query: 293 CGSETNQVFVYD 304
GS + V+D
Sbjct: 435 SGSLDTSIRVWD 446
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 51/194 (26%), Positives = 90/194 (46%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + SG YD V ++ I H R V+S+ + ++ SGS D ++++W
Sbjct: 388 GTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNR-VYSLLFESERSIV-CSGSLDTSIRVW 445
Query: 171 D-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D R +G +CV+ +Q S ++ + G+ LV+ AD +D+ + V +
Sbjct: 446 DFTRPEGQECVALLQGHTSLTSGMQLR----GNILVSCN-ADSHVRVWDIHEGTC-VHML 499
Query: 230 DGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR--- 286
GHR +T +++ + + T+ DG +KLW++ +IR + N G +WR
Sbjct: 500 SGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGN--GGCIWRLCS 557
Query: 287 HGGLLGC--GSETN 298
+L C GS N
Sbjct: 558 TSTMLACAVGSRNN 571
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 49/195 (25%), Positives = 87/195 (44%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++ + W P SGR LG+ YD +DLE + I ++ H V+ + + + D L
Sbjct: 324 RVARVTWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQ-DGSLA 379
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+G D ++WD R G+C+ ++ + + F P G +A G D +D
Sbjct: 380 GTGGLDAFGRVWDLRT--GRCIMFLEGHLKE--IYGINFSPNGYH-IATGSGDNTCKVWD 434
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+R+ V H+ VT ++F + + L+T D K+W ++T GH
Sbjct: 435 LRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 493
Query: 277 RNFVGLSVWRHGGLL 291
+GL + G L+
Sbjct: 494 --VMGLDISSDGQLI 506
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 40/149 (26%), Positives = 70/149 (46%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G L C D+ +D
Sbjct: 296 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVTWHPSGRFL-GTTCYDRSWRLWD 350
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 351 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 407
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 408 EIYGINFSPNGYHIATGSGDNTCKVWDLR 436
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 49/195 (25%), Positives = 87/195 (44%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++ + W P SGR LG+ YD +DLE + I ++ H V+ + + + D L
Sbjct: 325 RVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQ-DGSLA 380
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+G D ++WD R G+C+ ++ + + F P G +A G D +D
Sbjct: 381 GTGGLDAFGRVWDLRT--GRCIMFLEGHLKE--IYGINFSPNGYH-IATGSGDNTCKVWD 435
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+R+ V H+ VT ++F + + L+T D K+W ++T GH
Sbjct: 436 LRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 494
Query: 277 RNFVGLSVWRHGGLL 291
+GL + G L+
Sbjct: 495 --VMGLDISSDGQLI 507
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 40/149 (26%), Positives = 70/149 (46%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G L C D+ +D
Sbjct: 297 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGRFL-GTTCYDRSWRLWD 351
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 352 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 408
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 409 EIYGINFSPNGYHIATGSGDNTCKVWDLR 437
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 49/195 (25%), Positives = 87/195 (44%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++ + W P SGR LG+ YD +DLE + I ++ H V+ + + + D L
Sbjct: 340 RVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQ-DGSLA 395
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+G D ++WD R G+C+ ++ + + F P G +A G D +D
Sbjct: 396 GTGGLDAFGRVWDLRT--GRCIMFLEGHLKE--IYGINFSPNGYH-IATGSGDNTCKVWD 450
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+R+ V H+ VT ++F + + L+T D K+W ++T GH
Sbjct: 451 LRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 509
Query: 277 RNFVGLSVWRHGGLL 291
+GL + G L+
Sbjct: 510 --VMGLDISSDGQLI 522
Score = 119 (46.9 bits), Expect = 0.00036, P = 0.00036
Identities = 40/149 (26%), Positives = 70/149 (46%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G L C D+ +D
Sbjct: 312 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGRFL-GTTCYDRSWRLWD 366
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 367 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 423
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 424 EIYGINFSPNGYHIATGSGDNTCKVWDLR 452
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 49/195 (25%), Positives = 87/195 (44%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++ + W P SGR LG+ YD +DLE + I ++ H V+ + + + D L
Sbjct: 342 RVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGHS-MGVYDIAFHQ-DGSLA 397
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+G D ++WD R G+C+ ++ + + F P G +A G D +D
Sbjct: 398 GTGGLDAFGRVWDLRT--GRCIMFLEGHLKE--IYGINFSPNGYH-IATGSGDNTCKVWD 452
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+R+ V H+ VT ++F + + L+T D K+W ++T GH
Sbjct: 453 LRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 511
Query: 277 RNFVGLSVWRHGGLL 291
+GL + G L+
Sbjct: 512 --VMGLDISSDGQLI 524
Score = 119 (46.9 bits), Expect = 0.00036, P = 0.00036
Identities = 40/149 (26%), Positives = 70/149 (46%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G L C D+ +D
Sbjct: 314 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGRFL-GTTCYDRSWRLWD 368
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 369 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 425
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 426 EIYGINFSPNGYHIATGSGDNTCKVWDLR 454
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 57/211 (27%), Positives = 99/211 (46%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDL--EKK-VPIFERDEHGGRRV-WSVDYSKGDP 155
+SS++W P T+ +L SG D V +++ E++ + F + + W+ ++G
Sbjct: 288 ISSIRWFPKTAHLLL-SGSMDCRVKLWEVYGERRCIRTFSGHRQAIKDIAWN---NRGTN 343
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS--LVAAGCADKK 213
L AS D +++WD + G VS +R CV+FHP S L AG +DKK
Sbjct: 344 FLSASY--DRYIKLWD--AETGDVVSRF---TTRKMPFCVKFHPDNSKQHLFVAGTSDKK 396
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D R D V +D H +V+ I F+D + VT D +++W D V Y
Sbjct: 397 IICWDTRSG-DIVQEYDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEW-DIPVDMKYIA 454
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
+ +++ +G + C S N++ ++
Sbjct: 455 DPTMHSMPAVTLAPNGKWMACQSLDNKIVIF 485
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 148 (57.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 50/164 (30%), Positives = 77/164 (46%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSS 203
VW +D S + AS S D T ++W D ++ A A V CV+FHP S+
Sbjct: 383 VWDLDISPHS-LYFASASHDRTARLWS--FDR---TYPLRIYAGHLADVDCVKFHP-NSN 435
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+A G DK + ++ + V +F GHR V + F + L +AG D LKLW++
Sbjct: 436 YLATGSTDKTVRLWSTQQG-NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLA 494
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ + +GH +N L+ L+ S N V V+D+R
Sbjct: 495 SGTLYKELRGHTDN--ITSLTFSPDSSLVASASMDNSVRVWDIR 536
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 136 (52.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
SV + D +L A+GS D T ++W P+C + + S R + CV+F P L
Sbjct: 484 SVAIAPNDKLL-ATGSQDRTAKLWALPQC---QLLGVF--SGHRRGLWCVQFSPMDQVLA 537
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDS 264
A AD + ++ + F+GH +V + F+ T L+++G+DG +KLW + ++
Sbjct: 538 TAS-ADGTIKLWALQDF-SCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNN 595
Query: 265 RVIRTYKGH 273
+RT H
Sbjct: 596 ECVRTLDAH 604
Score = 116 (45.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 42/149 (28%), Positives = 69/149 (46%)
Query: 160 SGSDDGTMQMWD-PRC--------DGGKCVSTVQPS--ASRSAVCCVEFHPFGSSLVAAG 208
+GS D T+++W P+ D G + Q + + V P L+A G
Sbjct: 439 TGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAP-NDKLLATG 497
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVI 267
D+ A + + + + VF GHR+ + ++F +D L TA DG +KLW + D +
Sbjct: 498 SQDRTAKLWALPQC-QLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL 556
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
+T++GH + V V R LL GS+
Sbjct: 557 KTFEGHDASVLKVAF-VSRGTQLLSSGSD 584
Score = 114 (45.2 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 62/252 (24%), Positives = 98/252 (38%)
Query: 111 GRVLGSGDYDGVVMEYDLE-----KKVPIFERDEHG---GRRVWSVDYSKGDPVLGASGS 162
G + S D + + +DL+ + VP+FE E S K + +
Sbjct: 207 GHTMLSSGRDKICIIWDLQSCQATRTVPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAG 266
Query: 163 DDGTMQMWDPRCDGGKCVST-VQPSA-SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
D GT+++W+ G+CV T QP + C H G L A AD Y+ R
Sbjct: 267 DQGTLRVWEAA--SGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTAT--ADHNLLLYEAR 322
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDT--LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ F G+ + V +RFL + +V A CLK++ + S + GH +
Sbjct: 323 SL-RLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFELQTS-ACQILHGHTDI-- 378
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
+ L V+R G L ++ V ++ + V V V +VC R+
Sbjct: 379 VLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMC-----VAQGSGHTHSVGTVCCSRLK 433
Query: 339 EDECTLVAGGSD 350
E LV G D
Sbjct: 434 ES--FLVTGSQD 443
Score = 58 (25.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNI 71
+ + FDP+ ++ ATGG +R+++I
Sbjct: 112 VATMAFDPTSTLLATGGCDGAVRVWDI 138
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 47/179 (26%), Positives = 86/179 (48%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
A++ + + P SG L S +D +D+ V + ++ H ++S+ + D L
Sbjct: 266 ARVGRVAFHP--SGDYLVSASFDTTWRLWDVHTGVELLMQEGHS-EGIFSIA-CQPDGSL 321
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
+SG +D ++WD R GK + + + + + + P G L A AD +
Sbjct: 322 VSSGGNDAIGRIWDLR--SGKSIMVLDEHIRQ--IVAMAWSPNGYQL-ATSSADDTVKIW 376
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLD--VDTLV-TAGTDGCLKLWNVNDSRVIRTYKGH 273
D+RK V H V+ +R+++ V+ + T+G DGC+KLWN + +I++ GH
Sbjct: 377 DLRK-VSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGH 434
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 47/230 (20%), Positives = 87/230 (37%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLK 104
I ++ F + + FA+G +++++N + D+Y A
Sbjct: 175 IAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQA------ 228
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W + L +G D V + + P+ + H R + GD ++ AS D
Sbjct: 229 WDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASF--D 286
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T ++WD V + + + P GS LV++G D +D+R
Sbjct: 287 TTWRLWDVHTG----VELLMQEGHSEGIFSIACQPDGS-LVSSGGNDAIGRIWDLRSGKS 341
Query: 225 PVLVFDGH-RKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
++V D H R+ V + L T+ D +K+W++ + T H
Sbjct: 342 -IMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAH 390
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 149 (57.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 75/289 (25%), Positives = 112/289 (38%)
Query: 54 DSVFATGGIARK-IRIYNI--KSXXXXXXXXXXXXXSKVCDYY---ICTPAKLSSLKWKP 107
DS GG A +R++++ K K D I S LK
Sbjct: 461 DSSMIVGGFADSTVRVWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILY 520
Query: 108 GTSGRVLGSG-----DY------DGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
G SG V G+ +Y DG V + L+ + H VW +S
Sbjct: 521 GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYY 579
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
SG D ++W D + + + + V C FHP S+ +A G AD+
Sbjct: 580 F-VSGGHDRVARLW--ATDHYQPLRIF--AGHLADVTCTRFHP-NSNYIATGSADRTVRL 633
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+DV + V +F GH+ + + F L T TDG + LW++ ++ KGH +
Sbjct: 634 WDVLNG-NCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 692
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYD-VRWGEPVWVHDFEPVTAAG 323
L R G +L GS N V ++D V+ E + DF TA G
Sbjct: 693 T--IYALRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDF--TTATG 737
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 149 (57.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 59/210 (28%), Positives = 87/210 (41%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
S DG V + L+ + H VW +S SG D ++W D
Sbjct: 560 SSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYF-VSGGHDRVARLW--ATD 615
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
+ + + + V C FHP S+ VA G AD+ +DV + V +F GH+
Sbjct: 616 HYQPLRIF--AGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGP 671
Query: 236 VTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
+ + F L T TDG + LW++ ++ KGH + L R G +L G
Sbjct: 672 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT--VCSLRFSRDGEILASG 729
Query: 295 SETNQVFVYD-VRWGEPVWVHDFEPVTAAG 323
S N V ++D V+ E V DF TA G
Sbjct: 730 SMDNTVRLWDAVKAFEDVETDDF--TTATG 757
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 145 (56.1 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 53/189 (28%), Positives = 87/189 (46%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
S+ + P +G+ L SG D V +DL + P F H R W S+ +S L A
Sbjct: 70 SVAFSP--TGKYLASGSGDTTVRFWDLSTETPHFTCQGH---RHWVLSISWSPDGKTL-A 123
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS----LVAAGCADKKAY 215
SG +G + +WDP GK V V S+ + + + P ++ +A+ D
Sbjct: 124 SGCKNGQILLWDPST--GKQVGRVLAGHSKW-ITGLSWEPLHANPECRYMASSSKDGSVR 180
Query: 216 AYDVRK-MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D + +L GH ++VT +R+ L +A D +K+W +D + RT +GH
Sbjct: 181 VWDTTAGRCERILT--GHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 238
Query: 275 NNRNFVGLS 283
+ N + LS
Sbjct: 239 HWVNTMALS 247
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 133 (51.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 46/167 (27%), Positives = 74/167 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +DG + +DL H + V SV +S + + SGS D T++
Sbjct: 32 SDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT-KDVLSVAFSSDNRQI-VSGSRDKTIK 89
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVR--KMVDP 225
+W+ G C TVQ + V CV F P S+ + C DK +++ K+
Sbjct: 90 LWNTL---GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 146
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+ G+ TVT D + G DG LW++N+ + + T G
Sbjct: 147 HIGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLDG 191
Score = 114 (45.2 bits), Expect = 0.00013, P = 0.00013
Identities = 40/165 (24%), Positives = 73/165 (44%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D SGS DGT+++WD G +T + V V F +V+ G DK
Sbjct: 33 DGQFALSGSWDGTLRLWD--LTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVS-GSRDKT 87
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT---LVTAGTDGCLKLWNVNDSRVIRTY 270
++ + + + H + V+ +RF + +V+ G D +K+WN+ + ++ +
Sbjct: 88 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 147
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHD 315
GH N V +S G L G + Q ++D+ G+ ++ D
Sbjct: 148 IGHTGYLNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLD 190
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 135 (52.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 53/189 (28%), Positives = 84/189 (44%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
S+ + P +G+ L SG D V +DL + P F H R W S+ +S L A
Sbjct: 132 SVAFSP--TGKYLASGSGDTTVRFWDLSTETPQFTAKGH---RHWVLSIAWSPDGKKL-A 185
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC-CVE---FHPFGSSLVAAGCADKKAY 215
SG + + +WDP G + V S+ C C E +P L +A D
Sbjct: 186 SGCKNSQIFLWDPAT--GNQIGRVLTGHSKWITCLCWEPLHINPECRYLASAS-KDGSIR 242
Query: 216 AYD-VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D + D +L GH ++VT +++ L ++ D +K+W D + RT +GH
Sbjct: 243 IWDTLMGRCDKILT--GHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHA 300
Query: 275 NNRNFVGLS 283
+ N + LS
Sbjct: 301 HWVNTMALS 309
Score = 52 (23.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 324 SERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKKPLS 364
S RG VS+V D LV+G SD L V+ + K L+
Sbjct: 422 SLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLA 462
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 145 (56.1 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 53/189 (28%), Positives = 86/189 (45%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
S+ + P +G+ L SG D V +DL + P F H R W S+ +S L A
Sbjct: 119 SVAFSP--TGKYLASGSGDTTVRFWDLSTETPHFTCQGH---RHWVLSISWSPDGKKL-A 172
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS----LVAAGCADKKAY 215
SG +G + +WDP GK V S+ + + + P ++ VA+ D
Sbjct: 173 SGCKNGQILLWDPST--GKQVGRALAGHSKW-ITALSWEPLHANPECRYVASSSKDGSVR 229
Query: 216 AYDVRK-MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D + +L GH ++VT +R+ L +A D +K+W +D + RT +GH
Sbjct: 230 VWDTTAGRCERILT--GHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 287
Query: 275 NNRNFVGLS 283
+ N + LS
Sbjct: 288 HWVNTMALS 296
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 144 (55.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 49/158 (31%), Positives = 78/158 (49%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S S+D T+++WD +CV+ S + V+F+P G+ + +AG +D+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTT--NKQCVNNFSDSVGFANF--VDFNPSGTCIASAG-SDQT 209
Query: 214 AYAYDVRKMVDPVLV-FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYK 271
+DVR V+ +L + H V I F D LVTA +DG LK+ ++ + R+I T +
Sbjct: 210 VKVWDVR--VNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQ 267
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
GH V S + G L G QV ++ + E
Sbjct: 268 GHTGPVFTVSFS--KGGELFASGGADTQVLLWRTNFDE 303
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 142 (55.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 61/257 (23%), Positives = 112/257 (43%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE-HGGRRVWSVDYSKGDPVLGASGS 162
K+ P +G L S +D +++ +++ + + H G V + Y+ +L S S
Sbjct: 74 KFHP--NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA-VMELHYNTDGSML-FSAS 129
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +WD + G+ V ++ S C G LV G D +D+RK
Sbjct: 130 TDKTVAVWDS--ETGERVKRLKGHTSFVNSCYPARR--GPQLVCTGSDDGTVKLWDIRKK 185
Query: 223 VDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ F + + + F D D +++ G D +K+W++ +++ T +GH ++ G
Sbjct: 186 A-AIQTFQNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS--VTG 241
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVTAAGSERGFVSSVCWRRVGE 339
LS+ G L + N V V+DVR P V F+ G+ F ++
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQ-----GNVHNFEKNLLRCSWSP 296
Query: 340 DECTLVAGGSDGLLHVF 356
D + AG +D ++V+
Sbjct: 297 DGSKIAAGSADRFVYVW 313
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 50/164 (30%), Positives = 73/164 (44%)
Query: 156 VLGASGSDDGT-MQMWDPRC--DGG--KCVSTVQP----SASRSAVCCVEFHPFGSSLVA 206
+LGA+GS G Q P G +C S P S V C +FHP GS+L +
Sbjct: 25 LLGAAGSGPGAGQQQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLAS 84
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSR 265
AG D+ ++V D GH V + + D L +A TD + +W+
Sbjct: 85 AGF-DRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGE 143
Query: 266 VIRTYKGHVNNRNFVGLSVW--RHGGLLGC-GSETNQVFVYDVR 306
++ KGH + FV S + R G L C GS+ V ++D+R
Sbjct: 144 RVKRLKGHTS---FVN-SCYPARRGPQLVCTGSDDGTVKLWDIR 183
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 142 (55.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 62/257 (24%), Positives = 112/257 (43%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE-HGGRRVWSVDYSKGDPVLGASGS 162
K+ P +G L S +D +++ +++ + + H G V + Y+ +L S S
Sbjct: 74 KFHP--NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA-VMELHYNTDGSML-FSAS 129
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +WD + G+ V ++ S C G LV G D +D+RK
Sbjct: 130 TDKTVAVWDS--ETGERVKRLKGHTSFVNSCYPARR--GPQLVCTGSDDGTVKLWDIRKK 185
Query: 223 VDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
V F + + + F D D +++ G D +K+W++ +++ T +GH ++ G
Sbjct: 186 A-AVQTFQNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS--VTG 241
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVTAAGSERGFVSSVCWRRVGE 339
LS+ G L + N V V+DVR P V F+ G+ F ++
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ-----GNVHNFEKNLLRCSWSP 296
Query: 340 DECTLVAGGSDGLLHVF 356
D + AG +D ++V+
Sbjct: 297 DGSKIAAGSADRFVYVW 313
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/157 (28%), Positives = 68/157 (43%)
Query: 155 PVLGASGSDDGTM-QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
P G + G + Q PRC + + CC +FHP GS+L +AG D+
Sbjct: 33 PGAGPQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCC-KFHPNGSTLASAGF-DRL 90
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
++V D GH V + + D L +A TD + +W+ ++ KG
Sbjct: 91 ILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 150
Query: 273 HVNNRNFVGLSVW--RHGGLLGC-GSETNQVFVYDVR 306
H + FV S + R G L C GS+ V ++D+R
Sbjct: 151 HTS---FVN-SCYPARRGPQLVCTGSDDGTVKLWDIR 183
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 145 (56.1 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 54/205 (26%), Positives = 93/205 (45%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKV-PIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G++L + GV +++ + I +H R V +S D L A+ S D T ++
Sbjct: 267 GKILATCSLSGVTKLWEMPQVTNTIAVLKDHK-ERATDVVFSPVDDCL-ATASADRTAKL 324
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + DG + T + R A V FHP G L DK +D+ + +L+
Sbjct: 325 W--KTDG-TLLQTFEGHLDRLAR--VAFHPSGKYLGTTSY-DKTWRLWDINTGAE-LLLQ 377
Query: 230 DGHRKTVTYIRFLDVDTLVTA-GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH ++V I F L + G D ++W++ R I ++GH+ V S +G
Sbjct: 378 EGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSP--NG 435
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWV 313
L G E NQ ++D+R + +++
Sbjct: 436 YHLASGGEDNQCRIWDLRMRKSLYI 460
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/177 (24%), Positives = 81/177 (45%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+L+ + + P SG+ LG+ YD +D+ + ++ H R V+ + + + D L
Sbjct: 341 RLARVAFHP--SGKYLGTTSYDKTWRLWDINTGAELLLQEGHS-RSVYGIAFQQ-DGALA 396
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS D ++WD R G+ + Q V V F P G L A+G D + +D
Sbjct: 397 ASCGLDSLARVWDLRT--GRSILVFQGHIK--PVFSVNFSPNGYHL-ASGGEDNQCRIWD 451
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDT--LVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+R M + + H V+ +++ + L TA D + +W+ D ++++ GH
Sbjct: 452 LR-MRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGH 507
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 141 (54.7 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 40/156 (25%), Positives = 73/156 (46%)
Query: 182 TVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
T+ ++ + V + F G +A+ D ++V + + V GH+ V ++
Sbjct: 30 TMLINSHKGEVYSINFSSDGK-YIASSSFDMTIMVHNVYNECETIGVLRGHKNAVLQAKW 88
Query: 242 LDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
L D + +A D L LW+V +R++KGH N N GL + H + C S+ N +
Sbjct: 89 LQDDNYICSASADHKLFLWDVECESKLRSFKGHDNIVN--GLDIINHNLFVSC-SDDNTL 145
Query: 301 FVYDVR--WGEPVWVHDFEPVTAAGSERG-FVSSVC 333
+D+R W + HDF ++ ++G F+ + C
Sbjct: 146 KFWDIRSKWAVHIIKHDFPLLSVCSDKKGEFLFTSC 181
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 60/251 (23%), Positives = 107/251 (42%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK--GDPVLGASGSDDGTM 167
+G +G YD +D + + H V+++ ++ GD + A+GS D T
Sbjct: 103 AGSCFITGSYDRTCKVWDTASGEELHTLEGHRNV-VYAIAFNNPYGDKI--ATGSFDKTC 159
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W + GKC T + + + C+ F+P S++VA G D A +D++ + V+
Sbjct: 160 KLWS--AETGKCYHTFRGHTAE--IVCLSFNP-QSTVVATGSMDTTAKLWDIQSG-EEVV 213
Query: 228 VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH + + F D ++T D + +W+ + R + T GH + S W
Sbjct: 214 TLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFS-W- 271
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVA 346
L+ GS ++D G+ V T G + + S C+ G+ L+A
Sbjct: 272 DCSLILTGSMDKTCMLWDATSGKCV-------ATLTGHDDEILDS-CFDYTGK----LIA 319
Query: 347 GGS-DGLLHVF 356
S DG V+
Sbjct: 320 TASADGTARVY 330
Score = 126 (49.4 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
A++ SL + TSG + +G +D V+ +D + H + S +S D L
Sbjct: 220 AEIISLSFD--TSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAE-ISSALFS-WDCSL 275
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
+GS D T +WD GKCV+T+ C ++ L+A AD A Y
Sbjct: 276 ILTGSMDKTCMLWD--ATSGKCVATLTGHDDEILDSCFDYT---GKLIATASADGTARVY 330
Query: 218 DV--RKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+ RK + + +GH ++ I F + L+T +D ++W+V + ++ +GH
Sbjct: 331 NATTRKCITKL---EGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHT 387
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
+ + G ++ GS+ N ++
Sbjct: 388 DE--IFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 47 (21.6 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS 73
+ F+P +V ATG + ++++I+S
Sbjct: 183 LSFNPQSTVVATGSMDTTAKLWDIQS 208
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF----ERDEHGGRRVWSVDYS---KGDP 155
L W P G +L + D D V +D+ + +D G D + D
Sbjct: 178 LSWNPNKEGLILSASD-DQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDG 236
Query: 156 VLGASGSDDGTMQMWDPRCDG-GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
V G+ G DD + +WD R G C+ A + V C+ F+P+ ++A G ADK
Sbjct: 237 VFGSVG-DDKKLLIWDVRTSTPGHCID-----AHSAEVNCLAFNPYSEFILATGSADKTV 290
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
+D+R + + F+ HR + +++ + L ++GTD L +W+++
Sbjct: 291 ALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS 340
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 44/170 (25%), Positives = 77/170 (45%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF----ERDEHGGRRVWSVDYS---KGDP 155
L W P G +L + D D V +D+ + +D G D + D
Sbjct: 178 LSWNPNKEGLILSASD-DQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDG 236
Query: 156 VLGASGSDDGTMQMWDPRCDG-GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
V G+ G DD + +WD R G C+ A + V C+ F+P+ ++A G ADK
Sbjct: 237 VFGSVG-DDKKLLIWDVRTSTPGHCID-----AHSAEVNCLAFNPYSEFILATGSADKTV 290
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
+D+R + + F+ HR + +++ + L ++GTD L +W+++
Sbjct: 291 ALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS 340
>FB|FBgn0038617 [details] [associations]
symbol:CG12333 species:7227 "Drosophila melanogaster"
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046331 HSSP:P16649
GeneTree:ENSGT00640000091456 OMA:TGLPRDM EMBL:AY094717
RefSeq:NP_650723.1 UniGene:Dm.12926 SMR:Q9VE73 IntAct:Q9VE73
MINT:MINT-1593181 EnsemblMetazoa:FBtr0083655 GeneID:42218
KEGG:dme:Dmel_CG12333 UCSC:CG12333-RA FlyBase:FBgn0038617
InParanoid:Q9VE73 OrthoDB:EOG434TNF GenomeRNAi:42218 NextBio:827735
Uniprot:Q9VE73
Length = 487
Score = 144 (55.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 61/225 (27%), Positives = 99/225 (44%)
Query: 131 KVPIFERDEHGGRR--VWSVDY-SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSA 187
+ P+ E GG V + D+ S D ++ +GS D T +WD + G +QP
Sbjct: 265 RTPLCEFTGPGGHLSVVVAADWLSSMDQII--TGSWDRTAILWD--VETGL---PLQPLT 317
Query: 188 SRS-AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
+ V HP LV D +D R+ + V VF GH +TVT F D
Sbjct: 318 GHDHELTHVSAHPT-QRLVVTASRDTTFRLWDFREAIPAVSVFQGHTETVTSSVFARDDK 376
Query: 247 LVTAGTDGCLKLWNVNDSR-VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+V+ D +K+W + + R + T + ++ N + +S GG++ + Q+ ++D+
Sbjct: 377 VVSGSDDRTIKVWELRNMRSALATIRTD-SSVNRLAVST---GGIIAIPHDNRQIRLFDL 432
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
G+ V P T+ R VSSV W +C L + G D
Sbjct: 433 N-GQRV---ARLPRTSRQGHRRMVSSVAWAEEPLLDCDLFSCGFD 473
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 144 (55.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 51/187 (27%), Positives = 82/187 (43%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL + P G L SG D V +DL + P F H + V V ++ L ASG
Sbjct: 124 SLNFSP--DGAHLASGSGDTTVRLWDLNTETPHFTCTGHK-QWVLCVSWAPDGKRL-ASG 179
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSS----LVAAGCADKKAYA 216
G++ +WDP K +P S + + C+ + P+ +A+ D
Sbjct: 180 CKAGSIIIWDPETGQQKG----RPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRI 235
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+DV K+ ++ GH VT +R+ + T+ D +K+W D + RT+ GH +
Sbjct: 236 WDV-KLGQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHW 294
Query: 277 RNFVGLS 283
N + LS
Sbjct: 295 VNNIALS 301
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 137 (53.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 56/178 (31%), Positives = 78/178 (43%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S SDD T+++WD +CV + V V+FHP G+ + AAG D
Sbjct: 187 DGRLIVSASDDKTVKLWDKT--SRECVHSYCEHGG--FVTYVDFHPSGTCVAAAGM-DNT 241
Query: 214 AYAYDVRKMVDPVLV-FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYK 271
+DVR +L + H V + F LVTA +D LK+ ++ + R++ T
Sbjct: 242 VKVWDVR--THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLH 299
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFV----YDV-RWGEPVWVHDFEPVTAAGS 324
GH V S R G G QV V +DV +GE + V P T A S
Sbjct: 300 GHQGPATTVAFS--RTGEYFASGGSDEQVMVWKSNFDVIDYGEVLRVQR-PPATLASS 354
Score = 115 (45.5 bits), Expect = 0.00056, P = 0.00056
Identities = 49/194 (25%), Positives = 76/194 (39%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L SG D +M + ++ + + H V V++S +L ASGS D T+++W P
Sbjct: 65 LASGSMDSCLMVWHMKPQSRAYRFTGHKDA-VTCVNFSPSGHLL-ASGSRDKTVRIWVPN 122
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
G V + RS C + G S V A DK + + + H
Sbjct: 123 IKGESTVFRAHTATVRSVHFCSD----GQSFVTAS-DDKTIKVWSTHRQKF-LFSLSQHI 176
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
V +F D +V+A D +KLW+ + +Y H +V G +
Sbjct: 177 NWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP--SGTCVA 234
Query: 293 CGSETNQVFVYDVR 306
N V V+DVR
Sbjct: 235 AAGMDNTVKVWDVR 248
Score = 113 (44.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
K+ P GR++ S D V +D + + EHGG V VD+ + A+G D
Sbjct: 183 KFSP--DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF-VTYVDFHPSGTCVAAAGMD 239
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
+ T+++WD R + + Q ++ AV + FHP G+ LV A +D D+ M
Sbjct: 240 N-TVKVWDVRTH--RLLQHYQLHSA--AVNALSFHPSGNYLVTAS-SDSTLKILDL--ME 291
Query: 224 DPVL-VFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVN 262
+L GH+ T + F + + G+D + +W N
Sbjct: 292 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 332
Score = 44 (20.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 48 IEFDPSDSVFATGGIARKIRIY--NIK 72
+ F PS + A+G + +RI+ NIK
Sbjct: 98 VNFSPSGHLLASGSRDKTVRIWVPNIK 124
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 44/158 (27%), Positives = 77/158 (48%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L SGS D ++++WD + G C+ T+ P+ S V V F+ GS L+A+G D
Sbjct: 185 LVVSGSFDESVRIWDVKT--GMCIKTL-PAHS-DPVSAVSFNRDGS-LIASGSYDGLVRI 239
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
+D + D V +++F + A D LKLW+ + + ++ Y GH N
Sbjct: 240 WDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHEN 299
Query: 276 NRN--FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ F SV G + GSE ++++++++ E V
Sbjct: 300 SKYCIFANFSV-TGGKWIISGSEDCKIYIWNLQTREIV 336
Score = 122 (48.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 41/163 (25%), Positives = 77/163 (47%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SG +D V +D++ + I H V +V +++ D L ASGS DG +++WD
Sbjct: 188 SGSFDESVRIWDVKTGMCIKTLPAHSDP-VSAVSFNR-DGSLIASGSYDGLVRIWDTA-- 243
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
G+C+ T+ + V V+F P G ++A+ D +D K + + GH +
Sbjct: 244 NGQCIKTLVDDEN-PPVAFVKFSPNGKYILASNL-DSTLKLWDFSKG-KTLKQYTGHENS 300
Query: 236 VTYIRFLDVDTL----VTAGTDGC-LKLWNVNDSRVIRTYKGH 273
Y F + + +G++ C + +WN+ +++ +GH
Sbjct: 301 -KYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGH 342
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 142 (55.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 44/158 (27%), Positives = 77/158 (48%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L SGS D ++++WD + G C+ T+ P+ S V V F+ GS L+A+G D
Sbjct: 185 LVVSGSFDESVRIWDVKT--GMCIKTL-PAHS-DPVSAVSFNRDGS-LIASGSYDGLVRI 239
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
+D + D V +++F + A D LKLW+ + + ++ Y GH N
Sbjct: 240 WDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHEN 299
Query: 276 NRN--FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ F SV G + GSE ++++++++ E V
Sbjct: 300 SKYCIFANFSV-TGGKWIISGSEDCKIYIWNLQTREIV 336
Score = 122 (48.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 41/163 (25%), Positives = 77/163 (47%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SG +D V +D++ + I H V +V +++ D L ASGS DG +++WD
Sbjct: 188 SGSFDESVRIWDVKTGMCIKTLPAHSDP-VSAVSFNR-DGSLIASGSYDGLVRIWDTA-- 243
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
G+C+ T+ + V V+F P G ++A+ D +D K + + GH +
Sbjct: 244 NGQCIKTLVDDEN-PPVAFVKFSPNGKYILASNL-DSTLKLWDFSKG-KTLKQYTGHENS 300
Query: 236 VTYIRFLDVDTL----VTAGTDGC-LKLWNVNDSRVIRTYKGH 273
Y F + + +G++ C + +WN+ +++ +GH
Sbjct: 301 -KYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGH 342
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 140 (54.3 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 64/246 (26%), Positives = 104/246 (42%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
S +D + +DLEK + H V SV S + + SGS D T+++W+
Sbjct: 80 SASWDKTIRLWDLEKGECTHQFVGHTSD-VLSVSISPDNRQV-VSGSRDKTIKIWNII-- 135
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSL--VAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
G C T+ V CV F P +L V+AG DK +D+ + GH
Sbjct: 136 -GNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGW-DKAVKVWDLETFSLRTSHY-GHT 192
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
V+ + D + G DG L LW++N+S + + + N + V+
Sbjct: 193 GYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN----INALVFSPNRYWL 248
Query: 293 CGSETNQVFVYDVRWGEPV--WVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
C + + + ++D+ E V DF V SE +S + W G+ TL +G +D
Sbjct: 249 CAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECIS-LTWSPDGQ---TLFSGWTD 304
Query: 351 GLLHVF 356
L+ V+
Sbjct: 305 NLIRVW 310
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 141 (54.7 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 61/257 (23%), Positives = 112/257 (43%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE-HGGRRVWSVDYSKGDPVLGASGS 162
K+ P +G L S +D +++ +++ + + H G V + Y+ +L S S
Sbjct: 73 KFHP--NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA-VMELHYNTDGSML-FSAS 128
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +WD + G+ V ++ S C G LV G D +D+RK
Sbjct: 129 TDKTVAVWDS--ETGERVKRLKGHTSFVNSCYPARR--GPQLVCTGSDDGTVKLWDIRKK 184
Query: 223 VDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ F + + + F D D +++ G D +K+W++ +++ T +GH ++ G
Sbjct: 185 A-AIQTFQNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS--VTG 240
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVTAAGSERGFVSSVCWRRVGE 339
LS+ G L + N V V+DVR P V F+ G+ F ++
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ-----GNVHNFEKNLLRCSWSP 295
Query: 340 DECTLVAGGSDGLLHVF 356
D + AG +D ++V+
Sbjct: 296 DGSKIAAGSADRFVYVW 312
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/157 (28%), Positives = 68/157 (43%)
Query: 155 PVLGASGSDDGTM-QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
P G + G + Q PRC + + CC +FHP GS+L +AG D+
Sbjct: 32 PGAGQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCC-KFHPNGSTLASAGF-DRL 89
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
++V D GH V + + D L +A TD + +W+ ++ KG
Sbjct: 90 ILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 149
Query: 273 HVNNRNFVGLSVW--RHGGLLGC-GSETNQVFVYDVR 306
H + FV S + R G L C GS+ V ++D+R
Sbjct: 150 HTS---FVN-SCYPARRGPQLVCTGSDDGTVKLWDIR 182
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 142 (55.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 44/145 (30%), Positives = 67/145 (46%)
Query: 133 PIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
P ER G R + SVD+S L ASGS D + +W + + + + A
Sbjct: 9 PSLERHFKGHRDAITSVDFSLNTKQL-ASGSMDSCLMVWHMKPQS----RAYRFAGHKDA 63
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V CV F P G L+A+G DK + + + VF H TV + F D +LVTA
Sbjct: 64 VTCVNFSPSGH-LLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTA 121
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVN 275
D +K+W+ + + + + H+N
Sbjct: 122 SDDKTVKVWSTHRQKFLFSLSQHIN 146
Score = 128 (50.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 60/224 (26%), Positives = 95/224 (42%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ L + D V + ++ +F +H V +S D L S SDD T++
Sbjct: 113 SDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINW-VRCARFSP-DGRLIVSASDDKTVK 170
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD +CV + V V+FHP G+ + AA D +DVR +L
Sbjct: 171 LWDKT--SRECVHSYCEHGG--FVTYVDFHPSGTCIAAASM-DNTVKVWDVR--THRLLQ 223
Query: 229 -FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+ H V + F L+TA +D LK+ ++ + R++ T GH V S R
Sbjct: 224 HYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS--R 281
Query: 287 HGGLLGCGSETNQVFV----YDV-RWGEPVWVH-DFEPVTAAGS 324
G G QV V +DV + E + VH P+ +G+
Sbjct: 282 TGEYFASGGSDEQVMVWKSNFDVVDYREVIKVHRPPAPLATSGN 325
Score = 43 (20.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 48 IEFDPSDSVFATGGIARKIRIY--NIK 72
+ F PS + A+G + +RI+ N+K
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWIPNVK 93
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 141 (54.7 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 61/257 (23%), Positives = 112/257 (43%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE-HGGRRVWSVDYSKGDPVLGASGS 162
K+ P +G L S +D +++ +++ + + H G V + Y+ +L S S
Sbjct: 74 KFHP--NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA-VMELHYNTDGSML-FSAS 129
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +WD + G+ V ++ S C G LV G D +D+RK
Sbjct: 130 TDKTVAVWDS--ETGERVKRLKGHTSFVNSCYPARR--GPQLVCTGSDDGTVKLWDIRKK 185
Query: 223 VDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ F + + + F D D +++ G D +K+W++ +++ T +GH ++ G
Sbjct: 186 A-AIQTFQNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS--VTG 241
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVTAAGSERGFVSSVCWRRVGE 339
LS+ G L + N V V+DVR P V F+ G+ F ++
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ-----GNVHNFEKNLLRCSWSP 296
Query: 340 DECTLVAGGSDGLLHVF 356
D + AG +D ++V+
Sbjct: 297 DGSKIAAGSADRFVYVW 313
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 50/164 (30%), Positives = 73/164 (44%)
Query: 156 VLGASGSDDGT-MQMWDPRC--DGG--KCVSTVQP----SASRSAVCCVEFHPFGSSLVA 206
+LGA+GS G Q P G +C S P S V C +FHP GS+L +
Sbjct: 25 LLGAAGSGPGAGQQQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLAS 84
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSR 265
AG D+ ++V D GH V + + D L +A TD + +W+
Sbjct: 85 AGF-DRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGE 143
Query: 266 VIRTYKGHVNNRNFVGLSVW--RHGGLLGC-GSETNQVFVYDVR 306
++ KGH + FV S + R G L C GS+ V ++D+R
Sbjct: 144 RVKRLKGHTS---FVN-SCYPARRGPQLVCTGSDDGTVKLWDIR 183
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 141 (54.7 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 61/257 (23%), Positives = 112/257 (43%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE-HGGRRVWSVDYSKGDPVLGASGS 162
K+ P +G L S +D +++ +++ + + H G V + Y+ +L S S
Sbjct: 74 KFHP--NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA-VMELHYNTDGSML-FSAS 129
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +WD + G+ V ++ S C G LV G D +D+RK
Sbjct: 130 TDKTVAVWDS--ETGERVKRLKGHTSFVNSCYPARR--GPQLVCTGSDDGTVKLWDIRKK 185
Query: 223 VDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ F + + + F D D +++ G D +K+W++ +++ T +GH ++ G
Sbjct: 186 A-AIQTFQNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS--VTG 241
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVTAAGSERGFVSSVCWRRVGE 339
LS+ G L + N V V+DVR P V F+ G+ F ++
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ-----GNVHNFEKNLLRCSWSP 296
Query: 340 DECTLVAGGSDGLLHVF 356
D + AG +D ++V+
Sbjct: 297 DGSKIAAGSADRFVYVW 313
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 50/164 (30%), Positives = 73/164 (44%)
Query: 156 VLGASGSDDGT-MQMWDPRC--DGG--KCVSTVQP----SASRSAVCCVEFHPFGSSLVA 206
+LGA+GS G Q P G +C S P S V C +FHP GS+L +
Sbjct: 25 LLGAAGSGPGAGQQQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLAS 84
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSR 265
AG D+ ++V D GH V + + D L +A TD + +W+
Sbjct: 85 AGF-DRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGE 143
Query: 266 VIRTYKGHVNNRNFVGLSVW--RHGGLLGC-GSETNQVFVYDVR 306
++ KGH + FV S + R G L C GS+ V ++D+R
Sbjct: 144 RVKRLKGHTS---FVN-SCYPARRGPQLVCTGSDDGTVKLWDIR 183
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 144 (55.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 48/163 (29%), Positives = 75/163 (46%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VW +D S + AS S D T ++W D + + V CV+FHP S+
Sbjct: 387 VWDLDISPCS-LYFASASHDRTARLWS--FDRTYPLRIY--AGHLLDVDCVKFHP-NSNY 440
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A G DK + ++ + V +F GHR V + F + L +AG D LKLW++
Sbjct: 441 LATGSTDKTVRLWSTQQG-NSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLAS 499
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ + +GH +N L+ L+ S N V V+D+R
Sbjct: 500 GTLYKELRGHTDN--ITSLTFSPDSSLIASASMDNSVRVWDIR 540
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 146 (56.5 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 58/210 (27%), Positives = 87/210 (41%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
S DG V + L+ + H VW +S SG D ++W D
Sbjct: 561 SSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYF-VSGGHDRVARLW--ATD 616
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
+ + + + V C FHP S+ VA G AD+ +DV + V +F GH+
Sbjct: 617 HYQPLRIF--AGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGP 672
Query: 236 VTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
+ + F L T TDG + LW++ ++ KGH + L R G +L G
Sbjct: 673 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT--VCSLRFSRDGEILASG 730
Query: 295 SETNQVFVYD-VRWGEPVWVHDFEPVTAAG 323
S N V ++D V+ E + DF TA G
Sbjct: 731 SMDNTVRLWDAVKAFEDLETDDF--TTATG 758
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 135 (52.6 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 53/196 (27%), Positives = 83/196 (42%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G++L + D V + ++ +F +H V +S D L S SDD T++
Sbjct: 113 SDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINW-VRCAKFSP-DGRLIVSASDDKTVK 170
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD +CV + V V+FHP G+ + AAG D +D R V
Sbjct: 171 LWDKT--SRECVHSYCEHGG--FVTYVDFHPSGTCIAAAGM-DNTVKVWDTRTH-RLVQH 224
Query: 229 FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ H V + F L+TA +D LK+ ++ + R++ T GH V S R
Sbjct: 225 YQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS--RT 282
Query: 288 GGLLGCGSETNQVFVY 303
G G QV V+
Sbjct: 283 GEYFASGGSDEQVMVW 298
Score = 43 (20.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 48 IEFDPSDSVFATGGIARKIRIY--NIK 72
+ F PS + A+G + +RI+ N+K
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVK 93
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 142 (55.0 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 57/222 (25%), Positives = 103/222 (46%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDY-SKGDPVLGASGSDDGTMQM 169
G+ L +G D ++ +D+E + + H + ++S+DY GD ++ SGS D T+++
Sbjct: 455 GKFLATGAEDRLIRIWDIENRKIVMILQGHE-QDIYSLDYFPSGDKLV--SGSGDRTVRI 511
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD------VRKMV 223
WD R G+C T+ + V V P +AAG D+ +D V ++
Sbjct: 512 WDLRT--GQCSLTL---SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLD 566
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV------NDSRVIR------TY 270
GH+ +V + F D ++V+ D +KLWN+ +DS+ TY
Sbjct: 567 SENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTY 626
Query: 271 KGHVNNRNFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
GH ++FV ++ ++ + GS+ V +D + G P+
Sbjct: 627 IGH---KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 665
Score = 46 (21.3 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKS 73
F P ATG R IRI++I++
Sbjct: 451 FSPDGKFLATGAEDRLIRIWDIEN 474
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 138 (53.6 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 56/178 (31%), Positives = 78/178 (43%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S SDD T+++WD +CV + V V+FHP G+ + AAG D
Sbjct: 156 DGRLIVSASDDKTVKLWDKT--SRECVHSYCEHGG--FVTYVDFHPSGTCIAAAGM-DNT 210
Query: 214 AYAYDVRKMVDPVLV-FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYK 271
+DVR +L + H V + F LVTA +D LK+ ++ + R++ T
Sbjct: 211 VKVWDVR--THRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLH 268
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFV----YD-VRWGEPVWVHDFEPVTAAGS 324
GH V S R G G QV V +D V +GE + V P T A S
Sbjct: 269 GHQGPATTVAFS--RTGEYFASGGSDEQVMVWKSNFDIVDYGEVLRVQR-PPATRASS 323
Score = 118 (46.6 bits), Expect = 0.00031, P = 0.00031
Identities = 49/194 (25%), Positives = 76/194 (39%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L SG D +M + ++ + + H V V++S +L ASGS D T+++W P
Sbjct: 34 LASGSMDSCLMVWHMKPQTRAYRFAGHKDA-VTCVNFSPSGHLL-ASGSRDKTVRIWVPN 91
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
G V + RS C + G S V A DK + + + H
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSD----GQSFVTAS-DDKTVKVWSTHRQKF-LFSLSQHI 145
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
V +F D +V+A D +KLW+ + +Y H +V G +
Sbjct: 146 NWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP--SGTCIA 203
Query: 293 CGSETNQVFVYDVR 306
N V V+DVR
Sbjct: 204 AAGMDNTVKVWDVR 217
Score = 114 (45.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 44/161 (27%), Positives = 73/161 (45%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
K+ P GR++ S D V +D + + EHGG V VD+ + A+G D
Sbjct: 152 KFSP--DGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF-VTYVDFHPSGTCIAAAGMD 208
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
+ T+++WD R + + Q ++ AV + FHP G+ LV A +D D+ M
Sbjct: 209 N-TVKVWDVRTH--RLLQHYQLHSA--AVNALSFHPSGNYLVTAS-SDSTLKILDL--ME 260
Query: 224 DPVL-VFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVN 262
+L GH+ T + F + + G+D + +W N
Sbjct: 261 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 43 (20.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 48 IEFDPSDSVFATGGIARKIRIY--NIK 72
+ F PS + A+G + +RI+ N+K
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVK 93
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 140 (54.3 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 51/203 (25%), Positives = 90/203 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
T G +L S D V +D E + H V S ++ P L +GSDDGT++
Sbjct: 109 TDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSF-VNSCFPARRGPQLACTGSDDGTVK 167
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD R V T Q + V V F+ +++ G D +D+R+ +
Sbjct: 168 LWDIRKKAS--VHTFQNTYQ---VLSVTFNDTSDQIISGGI-DNDIKVWDLRQN-KLIYS 220
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHVNN--RNFVG 281
GH +VT + D L++ D +++W++ R ++ ++G+V+N +N +
Sbjct: 221 MQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLR 280
Query: 282 LSVWRHGGLLGCGSETNQVFVYD 304
S G + GS V+++D
Sbjct: 281 CSWSADGSKIAAGSADRFVYIWD 303
Score = 140 (54.3 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 52/205 (25%), Positives = 94/205 (45%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE-HGGRRVWSVDYSKGDPVLGASGS 162
K+ P +G L S YD +++ +++ + + H G V + Y+ +L S S
Sbjct: 63 KFHP--NGATLASSGYDRLILMWNVYGDCENYATLKGHSGA-VMELHYNTDGSLL-FSAS 118
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +WD + G+ V ++ S C G L G D +D+RK
Sbjct: 119 TDKTVCVWDS--ETGERVKRLKGHTSFVNSCFPARR--GPQLACTGSDDGTVKLWDIRKK 174
Query: 223 VDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
V F + ++ + F D D +++ G D +K+W++ +++I + +GH ++ G
Sbjct: 175 AS-VHTFQNTYQVLS-VTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDS--VTG 230
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVR 306
LS+ G L S N V V+D+R
Sbjct: 231 LSLSADGSYLLSNSMDNSVRVWDIR 255
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 36/134 (26%), Positives = 61/134 (45%)
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDV 244
S V C +FHP G++L ++G D+ ++V + GH V + + D
Sbjct: 53 SGHEGEVYCCKFHPNGATLASSGY-DRLILMWNVYGDCENYATLKGHSGAVMELHYNTDG 111
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGC-GSETNQVFVY 303
L +A TD + +W+ ++ KGH + N + R G L C GS+ V ++
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPA--RRGPQLACTGSDDGTVKLW 169
Query: 304 DVRWGEPVWVHDFE 317
D+R + VH F+
Sbjct: 170 DIR--KKASVHTFQ 181
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 141 (54.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 61/257 (23%), Positives = 112/257 (43%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE-HGGRRVWSVDYSKGDPVLGASGS 162
K+ P +G L S +D +++ +++ + + H G V + Y+ +L S S
Sbjct: 73 KFHP--NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGA-VMELHYNTDGSML-FSAS 128
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +WD + G+ V ++ S C G LV G D +D+RK
Sbjct: 129 TDKTVAVWDS--ETGERVKRLKGHTSFVNSCYPARR--GPQLVCTGSDDGTVKLWDIRKK 184
Query: 223 VDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ F + + + F D D +++ G D +K+W++ +++ T +GH ++ G
Sbjct: 185 A-AIQTFQNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS--VTG 240
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVTAAGSERGFVSSVCWRRVGE 339
LS+ G L + N V V+DVR P V F+ G+ F ++
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ-----GNVHNFEKNLLRCSWSP 295
Query: 340 DECTLVAGGSDGLLHVF 356
D + AG +D ++V+
Sbjct: 296 DGSKIAAGSADRFVYVW 312
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/157 (28%), Positives = 68/157 (43%)
Query: 155 PVLGASGSDDGTM-QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
P G + G + Q PRC + + CC +FHP GS+L +AG D+
Sbjct: 32 PGAGQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCC-KFHPNGSTLASAGF-DRL 89
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
++V D GH V + + D L +A TD + +W+ ++ KG
Sbjct: 90 ILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKG 149
Query: 273 HVNNRNFVGLSVW--RHGGLLGC-GSETNQVFVYDVR 306
H + FV S + R G L C GS+ V ++D+R
Sbjct: 150 HTS---FVN-SCYPARRGPQLVCTGSDDGTVKLWDIR 182
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 140 (54.3 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 61/255 (23%), Positives = 109/255 (42%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE-HGGRRVWSVDYSKGDPVLGASGS 162
K+ P +G L S +D +++ + + + + H G V + Y+ +L S S
Sbjct: 74 KFHP--NGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGA-VMELHYNTDGSML-FSAS 129
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +WD + G+ V ++ S C G LV G D +D+RK
Sbjct: 130 TDKTVAVWDS--ETGERVKRLKGHTSFVNSCYPARR--GPQLVCTGSDDGTVKLWDIRKK 185
Query: 223 VDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ F + + + F D D +++ G D +K+W++ +++ T +GH ++ G
Sbjct: 186 A-AIQTFQNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS--VTG 241
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVTAAGSERGFVSSVCWRRVGE 339
LS+ G L + N V V+DVR P V F+ G+ F ++
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQ-----GNVHNFEKNLLRCSWSP 296
Query: 340 DECTLVAGGSDGLLH 354
D + AG +D L+
Sbjct: 297 DGSKIAAGSADSFLY 311
Score = 131 (51.2 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 50/164 (30%), Positives = 72/164 (43%)
Query: 156 VLGASGSDDGT-MQMWDPRC--DGG--KCVSTVQP----SASRSAVCCVEFHPFGSSLVA 206
+LGA+GS G Q P G +C S P S V C +FHP GS+L +
Sbjct: 25 LLGAAGSGPGAGQQQATPGALLQTGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLAS 84
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSR 265
AG D+ + V D GH V + + D L +A TD + +W+
Sbjct: 85 AGF-DRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGE 143
Query: 266 VIRTYKGHVNNRNFVGLSVW--RHGGLLGC-GSETNQVFVYDVR 306
++ KGH + FV S + R G L C GS+ V ++D+R
Sbjct: 144 RVKRLKGHTS---FVN-SCYPARRGPQLVCTGSDDGTVKLWDIR 183
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 145 (56.1 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 57/210 (27%), Positives = 87/210 (41%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
S DG V + L+ + H VW +S SG D ++W D
Sbjct: 558 SSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYF-VSGGHDRVARLW--ATD 613
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
+ + + + V C FHP S+ VA G AD+ +DV + V +F GH+
Sbjct: 614 HYQPLRIF--AGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGP 669
Query: 236 VTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
+ + F L T TDG + LW++ ++ KGH + L R G +L G
Sbjct: 670 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT--VCSLRFSRDGEILASG 727
Query: 295 SETNQVFVYD-VRWGEPVWVHDFEPVTAAG 323
S N V ++D ++ E + DF TA G
Sbjct: 728 SMDNTVRLWDAIKAFEDLETDDF--TTATG 755
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 145 (56.1 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 57/210 (27%), Positives = 87/210 (41%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
S DG V + L+ + H VW +S SG D ++W D
Sbjct: 560 SSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYF-VSGGHDRVARLW--ATD 615
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
+ + + + V C FHP S+ VA G AD+ +DV + V +F GH+
Sbjct: 616 HYQPLRIF--AGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGP 671
Query: 236 VTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
+ + F L T TDG + LW++ ++ KGH + L R G +L G
Sbjct: 672 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT--VCSLRFSRDGEILASG 729
Query: 295 SETNQVFVYD-VRWGEPVWVHDFEPVTAAG 323
S N V ++D ++ E + DF TA G
Sbjct: 730 SMDNTVRLWDAIKAFEDLETDDF--TTATG 757
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 150 (57.9 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 45/170 (26%), Positives = 80/170 (47%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
++GS D+ V Y+ +KV FE R + +V +K P + SGSDD T+++W+
Sbjct: 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI-AVHPTK--PYV-LSGSDDLTVKLWNW 126
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
+ T + V CV F+P S A+GC D+ + + + + G
Sbjct: 127 E-NNWALEQTFE--GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQ 183
Query: 233 RKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ V Y+ + D ++TA D +K+W+ + T +GH++N +F
Sbjct: 184 ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF 233
Score = 39 (18.8 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 290 LLGCGSETNQVFVYDVR---WGEPVWVH--DFEPVTAAGSERGFVSSVCWRRVGEDECTL 344
LLG + N+V++ D +G + + +F+ +T G + +V G+D T
Sbjct: 575 LLGYLARDNKVYLADREVHVYGYEISLEVLEFQTLTLRGEIEEAIENVLPNVEGKDSLTK 634
Query: 345 VAGGSDG 351
+A +G
Sbjct: 635 IARFLEG 641
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 142 (55.0 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 53/189 (28%), Positives = 85/189 (44%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
S+ + P +G+ L SG D V +DL + P F H R W S+ +S L A
Sbjct: 120 SVAFSP--TGKYLASGSGDTTVRFWDLSTETPHFTCQGH---RHWVLSISWSPDGKKL-A 173
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS----LVAAGCADKKAY 215
SG +G + +WDP GK V S+ + + + P ++ VA+ D
Sbjct: 174 SGCKNGQILLWDPST--GKQVGRALTGHSKW-ITALSWEPLHANPECRYVASSSKDGSVR 230
Query: 216 AYDVRK-MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D + L GH ++VT +R+ L +A D +K+W +D + RT +GH
Sbjct: 231 VWDTTAGRCERTLT--GHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 288
Query: 275 NNRNFVGLS 283
+ N + LS
Sbjct: 289 HWVNTMALS 297
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 144 (55.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 54/207 (26%), Positives = 85/207 (41%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
S DG + + L+ + H VW +S SG D ++W D
Sbjct: 516 SSSEDGTIRLWSLQTFTCLVGYKGHN-YPVWDTQFSPFGYYF-VSGGHDRVARLW--ATD 571
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
+ + + + V C FHP S+ VA G +D+ +DV + V +F GH+
Sbjct: 572 HYQPLRIF--AGHLADVTCTRFHP-NSNYVATGSSDRTVRLWDVLNG-NCVRIFTGHKGP 627
Query: 236 VTYIRFLDVDTLVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
+ + F + +G TDG + LW++ +I KGH L R G ++ G
Sbjct: 628 IHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGT--IYALKFSRDGEIIASG 685
Query: 295 SETNQVFVYDV-RWGEPVWVHDFEPVT 320
S N V ++DV R + V DF T
Sbjct: 686 SIDNTVRLWDVMRAIDDVETDDFTAAT 712
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 53/225 (23%), Positives = 100/225 (44%)
Query: 48 IEFDPSDSVFAT-GGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLKWK 106
++F+P ++ A GG + +++++ S + + + S+ W
Sbjct: 108 MQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWS 167
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P +G+ L G DG + +D+++ + + + H V S+ +S DP + SGSDDG
Sbjct: 168 P--NGKRLACGSMDGTICVFDVDRSKLLHQLEGHN-MPVRSLVFSPVDPRVLFSGSDDGH 224
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+ M D +G + ++ S S V V+ P G + +A G +D+ +D+ KM +
Sbjct: 225 VNMHD--AEGKTLLGSM--SGHTSWVLSVDASPDGGA-IATGSSDRTVRLWDL-KMRAAI 278
Query: 227 LVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVIRTY 270
H V + F T V AG +L +V+D + + Y
Sbjct: 279 QTMSNHNDQVWSVAFRPPGGTGVRAG-----RLASVSDDKSVSLY 318
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 48/210 (22%), Positives = 85/210 (40%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SG + S D V +D++ I E VW + + +L +G ++++
Sbjct: 71 SGIIAASSSIDSFVRVFDVDTNATIAVL-EAPPSEVWGMQFEPKGTILAVAGGSSASVKL 129
Query: 170 WDPRCDGGKCVSTV--------QPS---ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
WD + +ST+ +PS +S+ V V + P G L A G D +D
Sbjct: 130 WDTA--SWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRL-ACGSMDGTICVFD 186
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
V + + +GH V + F VD L + DG + + + ++ + GH +
Sbjct: 187 VDRS-KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSW 245
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
V S GG + GS V ++D++
Sbjct: 246 VLSVDASP--DGGAIATGSSDRTVRLWDLK 273
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/145 (28%), Positives = 73/145 (50%)
Query: 133 PIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
P ER+ G R + S+D+S + ASGS D ++ +W+ + + + + A
Sbjct: 8 PTLERNFKGHRDAITSLDFSPSGKQI-ASGSVDASVMVWNMKPQS----RAYRFTGHKDA 62
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTA 250
V CV+F P + L+A+ DK + V + ++F H +V + F D +L+TA
Sbjct: 63 VTCVQFSP-SAHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTA 120
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVN 275
D +KLW+V+ ++I T + H N
Sbjct: 121 SDDQSIKLWSVHRQKIICTLREHNN 145
Score = 133 (51.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 53/208 (25%), Positives = 89/208 (42%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++SL + P SG+ + SG D VM ++++ + + H V V +S +L A
Sbjct: 21 ITSLDFSP--SGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDA-VTCVQFSPSAHLL-A 76
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++W P G + + RS VC F G SL+ A D+ + V
Sbjct: 77 SSSRDKTVRLWVPSVKGESVLFRAHTGSVRS-VC---FSADGQSLLTAS-DDQSIKLWSV 131
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + H V RF D +V+ D +KLW+ + ++I T+ +
Sbjct: 132 HRQ-KIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSS 190
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+V + S N V V+D+R
Sbjct: 191 YVDFHP--SSTCIATASSDNTVRVWDIR 216
Score = 118 (46.6 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 40/151 (26%), Positives = 66/151 (43%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S SDD T+++WD + + T S+ V+FHP S+ +A +D
Sbjct: 155 DGQLMVSVSDDRTVKLWD--ASSRQLIHTFCEPGGYSSY--VDFHP-SSTCIATASSDNT 209
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D+R + + H V + F L+TA +D LK+ ++ + R++ T G
Sbjct: 210 VRVWDIRTHT-LLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHG 268
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
H + + V S R G QV V+
Sbjct: 269 HQGSASCVSFS--RSGDQFASAGSDQQVMVW 297
Score = 48 (22.0 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIK 72
++F PS A+G + + ++N+K
Sbjct: 24 LDFSPSGKQIASGSVDASVMVWNMK 48
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/187 (26%), Positives = 81/187 (43%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++ + W P SGR LG+ YD +DLE + I ++ H + V + + D L
Sbjct: 310 RVARVTWHP--SGRFLGTTCYDHSWRLWDLEVQEEILHQEGHS-KGVHDLHFHP-DGSLA 365
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+G D ++WD R G+CV ++ + + F P G VA G D +D
Sbjct: 366 GTGGLDSFARVWDLRT--GRCVMFLEGHIKE--IYSINFSPNGFH-VATGSGDNACKVWD 420
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDT--LVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+R+ + H+ V+ ++F D L+T D K+W ++T GH
Sbjct: 421 LRQR-RCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 479
Query: 277 RNFVGLS 283
V LS
Sbjct: 480 VMGVDLS 486
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 38/149 (25%), Positives = 71/149 (47%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + ++ ++ + R V V +HP G L C D +D
Sbjct: 282 ASCAADGSVKLWS--LDSDEPIADIEGHSMR--VARVTWHPSGRFL-GTTCYDHSWRLWD 336
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ ++ + +L +GH K V + F +L T G D ++W++ R + +GH+
Sbjct: 337 L-EVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEI 395
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ S +G + GS N V+D+R
Sbjct: 396 YSINFSP--NGFHVATGSGDNACKVWDLR 422
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 59/215 (27%), Positives = 83/215 (38%)
Query: 120 DGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKC 179
DG V + L+ PI + + H RV V + LG + D + ++WD
Sbjct: 287 DGSVKLWSLDSDEPIADIEGHS-MRVARVTWHPSGRFLGTTCYDH-SWRLWDLEVQE--- 341
Query: 180 VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI 239
+ V + FHP GS L G D A +D+R V+ +GH K + I
Sbjct: 342 -EILHQEGHSKGVHDLHFHPDGS-LAGTGGLDSFARVWDLRTG-RCVMFLEGHIKEIYSI 398
Query: 240 RFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETN 298
F V G+ D K+W++ R I T H N + V G L G+ N
Sbjct: 399 NFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQP-NDGHYLLTGAYDN 457
Query: 299 QVFVYDVRWGEPVWVHDFEPV-TAAGSERGFVSSV 332
+ W P W P+ T AG E G V V
Sbjct: 458 TAKI----WTHPGW----SPLKTLAGHE-GKVMGV 483
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/198 (24%), Positives = 89/198 (44%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDE-HGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G L S +D +++ +++ + + H G V + Y+ +L S S D T+ +
Sbjct: 105 GNTLASAGFDRLILLWNVYGDCDNYATLKGHSGA-VMELHYNTDGSML-FSASTDKTVAV 162
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + G+ V ++ S C G LV G D +D+RK V F
Sbjct: 163 WDS--ETGERVKRLKGHTSFVNSCYPARR--GPQLVCTGSDDGTVKLWDIRKKA-AVQTF 217
Query: 230 DGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+ + + F D D +++ G D +K+W++ +++ T +GH ++ GLS+ G
Sbjct: 218 QNTYQVLA-VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADS--VTGLSLSSEG 274
Query: 289 GLLGCGSETNQVFVYDVR 306
L + N V ++DVR
Sbjct: 275 SYLLSNAMDNTVRIWDVR 292
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 44/159 (27%), Positives = 69/159 (43%)
Query: 155 PVLGASGSDDGT---MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD 211
P G G T +Q PRC + + CC +FHP+G++L +AG D
Sbjct: 57 PAAGGGGGQPSTGALLQSGPPRCSSLQAPIMLLSGHEGEVYCC-KFHPWGNTLASAGF-D 114
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTY 270
+ ++V D GH V + + D L +A TD + +W+ ++
Sbjct: 115 RLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRL 174
Query: 271 KGHVNNRNFVGLSVW--RHGGLLGC-GSETNQVFVYDVR 306
KGH + FV S + R G L C GS+ V ++D+R
Sbjct: 175 KGHTS---FVN-SCYPARRGPQLVCTGSDDGTVKLWDIR 209
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/195 (25%), Positives = 86/195 (44%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++ + W P SGR LG+ YD +DLE + I ++ H + V+ + + D L
Sbjct: 324 RVARVMWHP--SGRFLGTTCYDHSWRLWDLEAQEEILHQEGHS-KGVYDIAFHT-DGSLA 379
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+G D ++WD R G+C+ ++ + + F P G VA G D +D
Sbjct: 380 GTGGLDAFGRVWDLRT--GRCIMFLEGHLKE--IYGLNFSPNGYH-VATGSGDNTCKVWD 434
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+R+ + H+ VT ++F + L+T D K+W ++T GH
Sbjct: 435 LRQR-KCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK 493
Query: 277 RNFVGLSVWRHGGLL 291
+GL + G L+
Sbjct: 494 --VMGLDISLDGQLI 506
Score = 125 (49.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 46/161 (28%), Positives = 76/161 (47%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+V K D L AS + DG++++W D + V+ ++ + R V V +HP G L
Sbjct: 285 TVSLDKKDVNL-ASCAADGSVKLWSLESD--EPVADIEGHSMR--VARVMWHPSGRFL-G 338
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSR 265
C D +D+ + +L +GH K V I F +L T G D ++W++ R
Sbjct: 339 TTCYDHSWRLWDLEAQ-EEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGR 397
Query: 266 VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
I +GH+ + GL+ +G + GS N V+D+R
Sbjct: 398 CIMFLEGHL--KEIYGLNFSPNGYHVATGSGDNTCKVWDLR 436
>TAIR|locus:2043333 [details] [associations]
symbol:SWA1 "AT2G47990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0006364 "rRNA processing" evidence=IEA;IMP]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009561
"megagametogenesis" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0000741 "karyogamy" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC005309 GO:GO:0009561
EMBL:AC006072 GO:GO:0006364 HSSP:P16649 GO:GO:0080008
HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK UniGene:At.436
UniGene:At.71162 IPI:IPI00525548 PIR:A84922 RefSeq:NP_182320.1
ProteinModelPortal:O82266 SMR:O82266 STRING:O82266 PaxDb:O82266
PRIDE:O82266 DNASU:819411 EnsemblPlants:AT2G47990.1 GeneID:819411
KEGG:ath:AT2G47990 TAIR:At2g47990 InParanoid:O82266
PhylomeDB:O82266 ProtClustDB:CLSN2683735 Genevestigator:O82266
Uniprot:O82266
Length = 530
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 58/254 (22%), Positives = 103/254 (40%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G + + D GVV +D+++++ + H + V Y D + SG DDG ++
Sbjct: 103 SDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARF-VKYPVQDKLHLVSGGDDGVVK 161
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
WD G +S + + V C + P S++ G D +D R +
Sbjct: 162 YWDVA--GATVISDLL--GHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNWIA 217
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWN-VNDSRVIRTYKGHVNNRNFVGLSVWRH 287
H V + +L L+ +K+W+ + +++ + + H N+ L V R
Sbjct: 218 EINHGLPVEDVVYLPSGGLIATAGGNSVKVWDLIGGGKMVCSMESH--NKTVTSLRVAR- 274
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
E+ + + V + V D+ S R F + + + D T V G
Sbjct: 275 -------MESAESRLVSVALDGYMKVFDYGRAKVTYSMR-FPAPLMSLGLSPDGSTRVIG 326
Query: 348 GSDGLLHVFVGKKK 361
GS+G+ VF GKKK
Sbjct: 327 GSNGM--VFAGKKK 338
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/152 (32%), Positives = 76/152 (50%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+++ SG D V+ +D + + E H + V V G+ VL A+ DGT++MW
Sbjct: 910 GKIV-SGSDDLSVIVWDKQTTQLLEELKGHDSQ-VSCVKMLSGERVLTAA--HDGTVKMW 965
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R D CV+TV SA+ +E+ L AAG D A +D+R +
Sbjct: 966 DVRTD--MCVATV--GRCSSAILSLEYDDSTGILAAAG-RDTVANIWDIRSGKQ-MHKLK 1019
Query: 231 GHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN 262
GH K + IR ++ DTL+T D ++W+V+
Sbjct: 1020 GHTKWIRSIRMVE-DTLITGSDDWTARVWSVS 1050
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 74/289 (25%), Positives = 121/289 (41%)
Query: 87 SKVCDYYICTPAK-----LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI-FER--D 138
+ VC +I T + ++ + W P GR L +G G E+ L + FE
Sbjct: 110 TSVCSRFIHTSSNKVKYPINCVSWTP--EGRRLVTGSSSG---EFTLWNGLTFNFETILQ 164
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
H V S+ +S + + SG D G ++ W P + K + S R + F
Sbjct: 165 AHDSA-VRSIIWSHNEDWM-VSGDDSGNIKYWQPNMNNVKIFKAHEQSKIRG----LSFS 218
Query: 199 PFGSSLVAAGCADKKAYA-YDVRKMV-DPVLVFDGHRKTVTYIRFLDVDTL-VTAGTDGC 255
P + L A CAD K +D + D LV GH V + + +L V+ G D
Sbjct: 219 P--TDLKLASCADDKIIKIWDFARCTEDNQLV--GHGWDVKCVSWHPQKSLIVSGGKDNN 274
Query: 256 LKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVF-VYDVRWGEPVWVH 314
+K+W+ S+ I T GH ++ V W G + ++Q+ V+D+R +
Sbjct: 275 IKIWDAKSSQNITTLHGH---KSTVSKVEWNQNGNWIVSASSDQLLKVFDIRT-----MK 326
Query: 315 DFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG-LLHVFVGKKKP 362
+ + G E V+++ ED V+G DG +L+ VG +P
Sbjct: 327 EMQTFKGHGKE---VTALALHPYHED--LFVSGDKDGKILYWIVGNPEP 370
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 57/210 (27%), Positives = 87/210 (41%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
S DG V + L+ + H VW +S SG D ++W D
Sbjct: 561 SSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYF-VSGGHDRVARLW--ATD 616
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
+ + + + V C +HP S+ VA G AD+ +DV + V +F GH+
Sbjct: 617 HYQPLRIF--AGHLADVNCTRYHP-NSNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGP 672
Query: 236 VTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
+ + F L T TDG + LW++ ++ KGH + L R G +L G
Sbjct: 673 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT--VCSLRFSRDGEILASG 730
Query: 295 SETNQVFVYD-VRWGEPVWVHDFEPVTAAG 323
S N V ++D V+ E + DF TA G
Sbjct: 731 SMDNTVRLWDAVKAFEDLETDDF--TTATG 758
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/197 (22%), Positives = 87/197 (44%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ W +++ SG +D +D + K + F+ H G ++S +S P A
Sbjct: 114 SVDWSQTRGEQLVVSGSWDQTAKLWDPAVGKSLRTFKG--HEGV-IYSTIWSPHIPGCFA 170
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD + G V V P+ + C ++ + +L+ G D +D+
Sbjct: 171 SASGDQTLRIWDVKAPG---VRLVIPAHQAEILSC-DWCKYDENLLVTGAVDCSLKGWDL 226
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSR-VIRTYKGHVNN 276
R + PV + GH V ++F L + D ++ W+ + ++ T + H
Sbjct: 227 RNVRQPVFILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFWDFSKPNPLLETVEHHTEF 286
Query: 277 RNFVGLSVWRHGGLLGC 293
+ LS+ + G ++ C
Sbjct: 287 TCGLDLSLHKCGQVVDC 303
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 60/258 (23%), Positives = 116/258 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +D + +DL + V + H + V SV +S + + SGS D +++
Sbjct: 79 SDGQFALSGSWDKTLRLWDLNQGVSTRQFISHT-KDVLSVAFSADNRQI-VSGSRDKSIK 136
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS--LVAAGCADKKAYAYDVR--KMVD 224
+W+ +C T+ V V F P +V+AG DK +++ ++
Sbjct: 137 LWNTLA---QCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGW-DKVVKVWNLGNCRLKT 192
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGL 282
+ G+ TVT D + G DG LW++N+ + + T G+ +N +F
Sbjct: 193 NHIGHTGYVNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDVINAMSFSPN 250
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP-VTAAGSERGFVS---SVCWRRVG 338
W C + + + ++D+ + + + +P + ++GS RG S+ W + G
Sbjct: 251 RYWL------CAAVGSSIKIWDLE--DKKEIEELKPEIASSGSSRGSSPQCISLAWSQDG 302
Query: 339 EDECTLVAGGSDGLLHVF 356
+ TL AG +D ++ V+
Sbjct: 303 Q---TLFAGYTDNIIRVY 317
Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 54/209 (25%), Positives = 94/209 (44%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSV---DYSKGDPVLGA------SGSDDGT 166
S D ++ +D++ P+ E GR V S+ ++ D V+ + SGS D T
Sbjct: 35 SSSRDKTILVWDVDSVAPVDEGPI--GRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKT 92
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD + G VST Q + V V F +V+ G DK ++
Sbjct: 93 LRLWD--LNQG--VSTRQFISHTKDVLSVAFSADNRQIVS-GSRDKSIKLWNTLAQCKYT 147
Query: 227 LVFDGHRKTVTYIRFLDVD---TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ D H V+ +RF + +V+AG D +K+WN+ + R+ + GH N V +S
Sbjct: 148 ITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVS 207
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
G L G + Q ++D+ G+ ++
Sbjct: 208 P--DGSLCASGGKDGQAMLWDLNEGKHLY 234
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 60/258 (23%), Positives = 116/258 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ SG +D + +DL + V + H + V SV +S + + SGS D +++
Sbjct: 79 SDGQFALSGSWDKTLRLWDLNQGVSTRQFISHT-KDVLSVAFSADNRQI-VSGSRDKSIK 136
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS--LVAAGCADKKAYAYDVR--KMVD 224
+W+ +C T+ V V F P +V+AG DK +++ ++
Sbjct: 137 LWNTLA---QCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGW-DKVVKVWNLGNCRLKT 192
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNRNFVGL 282
+ G+ TVT D + G DG LW++N+ + + T G+ +N +F
Sbjct: 193 NHIGHTGYVNTVTVSP--DGSLCASGGKDGQAMLWDLNEGKHLYTLPGNDVINAMSFSPN 250
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP-VTAAGSERGFVS---SVCWRRVG 338
W C + + + ++D+ + + + +P + ++GS RG S+ W + G
Sbjct: 251 RYWL------CAAVGSSIKIWDLE--DKKEIEELKPEIASSGSSRGSSPQCISLAWSQDG 302
Query: 339 EDECTLVAGGSDGLLHVF 356
+ TL AG +D ++ V+
Sbjct: 303 Q---TLFAGYTDNIIRVY 317
Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 54/209 (25%), Positives = 94/209 (44%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSV---DYSKGDPVLGA------SGSDDGT 166
S D ++ +D++ P+ E GR V S+ ++ D V+ + SGS D T
Sbjct: 35 SSSRDKTILVWDVDSVAPVDEGPI--GRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKT 92
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD + G VST Q + V V F +V+ G DK ++
Sbjct: 93 LRLWD--LNQG--VSTRQFISHTKDVLSVAFSADNRQIVS-GSRDKSIKLWNTLAQCKYT 147
Query: 227 LVFDGHRKTVTYIRFLDVD---TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ D H V+ +RF + +V+AG D +K+WN+ + R+ + GH N V +S
Sbjct: 148 ITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVS 207
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
G L G + Q ++D+ G+ ++
Sbjct: 208 P--DGSLCASGGKDGQAMLWDLNEGKHLY 234
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 57/213 (26%), Positives = 94/213 (44%)
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
C P + S ++ P +S L S D + +DLE H VW +D S
Sbjct: 339 CGP--VYSTRFLPDSSA--LLSCSEDTSIRYWDLESFTNTVLYQGHA-YPVWDLDISPHS 393
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
+ AS S D T ++W D + + + V CV+FHP S+ +A G DK
Sbjct: 394 -LFFASASYDHTARLWS--FDRTYPLRIY--AGHLAGVDCVKFHP-NSNYLATGSTDKTV 447
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ ++ + V +F GH V + F + LV+AG D LKLW++ + + GH
Sbjct: 448 RLWSAQQG-NSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGH 506
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
++ V S+ ++ S N V ++D++
Sbjct: 507 TDDITSVTFSL--DSSVIASASMDNSVRIWDIK 537
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 52/212 (24%), Positives = 94/212 (44%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLE-KKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
++ W S V +GD+ G V + V +++ + R + +S D S
Sbjct: 193 TMVWSHNDSWMV--TGDHGGYVKYWQSNMNNVKMYQAHKEAIR---GISFSPTDSKF-VS 246
Query: 161 GSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA--YAY 217
GSDDGT+++WD RC + + + V CV +HP ++ +G D + +
Sbjct: 247 GSDDGTLRIWDFMRCQEERVLR-----GHGADVKCVHWHP-QKGMIVSGSKDNQQPIKIW 300
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRV-IRTYKGHVN 275
D + + + H+ TV +++ D LVTA D LKL+++ + R ++ ++GH
Sbjct: 301 DPKSGI-ALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKK 359
Query: 276 NRNFVGLSVWR--HGGLLGCGSETNQVFVYDV 305
+ V W H GL G + ++V
Sbjct: 360 EASSVS---WHPIHEGLFCSGGSDGSILFWNV 388
Score = 120 (47.3 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 49/191 (25%), Positives = 87/191 (45%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGT--MQMWDP 172
SG DG + +D + ER G G V V + ++ SGS D +++WDP
Sbjct: 246 SGSDDGTLRIWDFMRCQE--ERVLRGHGADVKCVHWHPQKGMI-VSGSKDNQQPIKIWDP 302
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
+ G ++T+ A +S V ++++ G+ LV A D +D+R + + V VF GH
Sbjct: 303 K--SGIALATLH--AHKSTVMDLKWNDNGNWLVTAS-RDHLLKLFDIRNLREEVQVFRGH 357
Query: 233 RKTVTYIRFLDVDT--LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
+K + + + + + G+DG + WNV + I + + + V W G
Sbjct: 358 KKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVE--TAHDSIVWTLAWHPLGH 415
Query: 291 LGC-GSETNQV 300
+ C GS + +
Sbjct: 416 ILCSGSNDHTI 426
Score = 45 (20.9 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 48 IEFDPSDSVFATGGIARKIRIYN 70
I F P+DS F +G +RI++
Sbjct: 235 ISFSPTDSKFVSGSDDGTLRIWD 257
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 42/167 (25%), Positives = 75/167 (44%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK--GDPVLGASGSDDGTM 167
SG +G YD +D + + H V+++ ++ GD + A+GS D T
Sbjct: 103 SGSCFITGSYDRTCKLWDTASGEELHTLEGHRNV-VYAIAFNNPYGDKI--ATGSFDKTC 159
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W + GKC T + + + C+ F+P S+LVA G D A +D++ + V
Sbjct: 160 KLWS--VETGKCYHTFRGHTAE--IVCLSFNP-QSTLVATGSMDTTAKLWDIQSG-EEVF 213
Query: 228 VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GH + + F + ++T D + +W + R + T GH
Sbjct: 214 TLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGH 260
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 43/157 (27%), Positives = 71/157 (45%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH-PFGSSLVAAGCADK--KAYA 216
+GS D T ++WD G+ + T++ R+ V + F+ P+G +A G DK K ++
Sbjct: 109 TGSYDRTCKLWDTA--SGEELHTLE--GHRNVVYAIAFNNPYGDK-IATGSFDKTCKLWS 163
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
+ K F GH + + F TLV G+ D KLW++ + T GH
Sbjct: 164 VETGKCYH---TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGH-- 218
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
+ + LS G + GS + V V++ G V+
Sbjct: 219 SAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVY 255
Score = 117 (46.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 47/181 (25%), Positives = 82/181 (45%)
Query: 98 AKLSSLKWKPGTSG-RVL-GSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
A++ SL + TSG R++ GS D+ V E D +KV + H + S ++ D
Sbjct: 220 AEIISLSFN--TSGNRIITGSFDHTVTVWEADTGRKV--YTLIGHCAE-ISSAVFN-WDC 273
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
L +GS D T ++WD GKCV+T+ C ++ L+A AD A
Sbjct: 274 SLILTGSMDKTCKLWD--AVNGKCVATLTGHDDEILDSCFDYT---GKLIATASADGTAR 328
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+ + V +GH ++ I F + L+T +D ++W+ + ++ +GH
Sbjct: 329 IFSAATR-ECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHT 387
Query: 275 N 275
+
Sbjct: 388 D 388
Score = 44 (20.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/26 (26%), Positives = 17/26 (65%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS 73
+ F+P ++ ATG + ++++I+S
Sbjct: 183 LSFNPQSTLVATGSMDTTAKLWDIQS 208
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 49/209 (23%), Positives = 88/209 (42%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ W +++ SG +D V +D + K + F E ++S +S P A
Sbjct: 116 SVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESV---IYSTIWSPHIPGCFA 172
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD + G V V P+ + C ++ + +LV G D +D+
Sbjct: 173 SSSGDQTLRIWDVKTTG---VRIVVPAHQAEILSC-DWCKYNENLVVTGAVDCSLRGWDL 228
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVND-SRVIRTYKGHVNN 276
R + PV GH + ++F L + D ++ WN + ++ T + H
Sbjct: 229 RNVQQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEF 288
Query: 277 RNFVGLSVWRHGGLLGCG-SETNQVFVYD 304
+ LS+ + C ET + +YD
Sbjct: 289 TCGLDLSLQSPTQVADCAWDET--IKIYD 315
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 53/189 (28%), Positives = 86/189 (45%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
S+ + P +G+ L SG D V +DL + P F H R W S+ +S L A
Sbjct: 119 SVAFSP--TGKYLASGSGDTTVRFWDLSTETPHFTCKGH---RHWVLSISWSPDGRKL-A 172
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS----LVAAGCADKKAY 215
SG +G + +WDP GK V S+ + + + P ++ VA+ D
Sbjct: 173 SGCKNGQILLWDPST--GKQVGRTLAGHSKW-ITGLSWEPLHANPECRYVASSSKDGSVR 229
Query: 216 AYDVRK-MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D + +L GH ++VT +R+ L +A D +K+W +D + RT +GH
Sbjct: 230 IWDTTAGRCERILT--GHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 287
Query: 275 NNRNFVGLS 283
+ N + LS
Sbjct: 288 HWVNTMALS 296
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 50/191 (26%), Positives = 87/191 (45%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D +L A+G ++G +++WD GK + + V + F P GS ++ + DK
Sbjct: 139 DQLLLATGLNNGRIKIWDVYT--GKLLLNLVDHTE--VVRDLTFAPDGSLILVSASRDKT 194
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D++ + + V GH+ V F D L + G + LWN++ +IR +G
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEG 254
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVT---AAGSERG 327
H + + V G LL S +V+++D G+ + + H F P T A G+
Sbjct: 255 H--HHDVVACDFSPDGALLATASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDR 312
Query: 328 FVSSVCWRRVG 338
+V SV + G
Sbjct: 313 WVRSVSFSHDG 323
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 50/191 (26%), Positives = 87/191 (45%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D +L A+G ++G +++WD GK + + V + F P GS ++ + DK
Sbjct: 139 DQLLLATGLNNGRIKIWDVYT--GKLLLNLVDHTE--VVRDLTFAPDGSLILVSASRDKT 194
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D++ + + V GH+ V F D L + G + LWN++ +IR +G
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEG 254
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVT---AAGSERG 327
H + + V G LL S +V+++D G+ + + H F P T A G+
Sbjct: 255 H--HHDVVACDFSPDGALLATASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDR 312
Query: 328 FVSSVCWRRVG 338
+V SV + G
Sbjct: 313 WVRSVSFSHDG 323
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 146 (56.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 52/168 (30%), Positives = 81/168 (48%)
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
GG VWS S G+ ++ SGS D T+++WD D G CV T+Q S V C+ H
Sbjct: 1036 GG--VWSSQMS-GNIII--SGSTDRTLKVWD--MDSGACVHTLQ--GHTSTVRCMHLH-- 1084
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWN 260
GS +V+ G D +D+ + + V GH V +++ D +V+ D +K+W+
Sbjct: 1085 GSKVVS-GSRDATLRVWDIEQG-SCLHVLVGHLAAVRCVQY-DGKLIVSGAYDYMVKIWH 1141
Query: 261 VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ T +GH N R + S+ G + GS + V+DV G
Sbjct: 1142 PERQECLHTLQGHTN-RVY---SLQFDGLHVVSGSLDTSIRVWDVETG 1185
Score = 44 (20.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 91 DYYICTPAKLSSLKWKPG-TSGRVLGSGDY 119
+Y + P+ L S + K GR+L GDY
Sbjct: 736 EYSLTNPSSLMSHQRKRKFNEGRLLDGGDY 765
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 125 (49.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 42/134 (31%), Positives = 65/134 (48%)
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+PV+ F+GH+ VT ++F D +VT+ DG +K+W+V V R YK H N V +
Sbjct: 91 NPVMTFEGHKNNVTSLQFQADNKWMVTSSEDGTVKVWDVRSPSVQRNYK-HQCPVNEVVI 149
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDEC 342
G L+ C + N + V+D+ GE H P ++S+ V D
Sbjct: 150 HP-NQGELISCDQDGN-IRVWDL--GENSCTHHLIPEDDVP-----INSLS---VASDGS 197
Query: 343 TLVAGGSDGLLHVF 356
LVAG + G +V+
Sbjct: 198 MLVAGNNKGNCYVW 211
Score = 50 (22.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 22/66 (33%), Positives = 30/66 (45%)
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
V+ AS D T++ WD G C T+Q S+ V +E L AAG K Y
Sbjct: 3 VILASAGYDHTIRFWDALT--GVCSRTIQHPESQ--VNRLEITSDKRFLAAAGNLYVKLY 58
Query: 216 AYDVRK 221
D+R+
Sbjct: 59 --DIRQ 62
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 47/158 (29%), Positives = 77/158 (48%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S S+D T+++WD +CV+ S + V+F+P G+ + +AG +D+
Sbjct: 25 DGRLIVSCSEDKTIKIWDTT--NKQCVNNFSDSVGFANF--VDFNPSGTCIASAG-SDQT 79
Query: 214 AYAYDVRKMVDPVLV-FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYK 271
+DVR V+ +L + H V I F L+TA +DG LK+ ++ + R+I T +
Sbjct: 80 VKVWDVR--VNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 137
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
GH V S + G L G QV ++ + E
Sbjct: 138 GHTGPVFTVSFS--KGGELFASGGADTQVLLWRTNFDE 173
>UNIPROTKB|E1BDF6 [details] [associations]
symbol:E1BDF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 IPI:IPI00732803 OMA:LAYACDD
EMBL:DAAA02027701 EMBL:DAAA02027702 EMBL:DAAA02027703
ProteinModelPortal:E1BDF6 Ensembl:ENSBTAT00000049661 Uniprot:E1BDF6
Length = 351
Score = 113 (44.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPV 156
AK+ S+ W GR L SG +D + LEK + E + G G V + + +P
Sbjct: 56 AKVHSVAWS--CDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPD 113
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
L + S D T+++WD R KC++TV + S +C + P G ++
Sbjct: 114 LFVTASGDKTIRIWDVRTT--KCIATVNTKGNCSELC---WEPEGQTI 156
Score = 64 (27.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 28/127 (22%), Positives = 53/127 (41%)
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
PV + H I+F + G+ D + LW+V++ +R + + LS
Sbjct: 216 PVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRL--DWPVRTLS 273
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT---AAGSERGFVSSVCWRRVGED 340
G +L SE + + + +V G+ +W E T A +R ++ C + G+
Sbjct: 274 FSHDGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKY 333
Query: 341 ECTLVAG 347
+ + AG
Sbjct: 334 DSSREAG 340
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 44/156 (28%), Positives = 73/156 (46%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH-PFGSSLVAAGCADK--KAYA 216
+GS D T ++WD G+ ++T++ R+ V + F+ P+G +A G DK K ++
Sbjct: 109 TGSYDRTCKLWDTA--SGEELNTLE--GHRNVVYAIAFNNPYGDK-IATGSFDKTCKLWS 163
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
+ K F GH + + F TLV G+ D KLW++ + + T +GH
Sbjct: 164 VETGKCYH---TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGH-- 218
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ + LS G + GS + V V+D G V
Sbjct: 219 SAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV 254
Score = 135 (52.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 42/167 (25%), Positives = 75/167 (44%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK--GDPVLGASGSDDGTM 167
SG +G YD +D + + H V+++ ++ GD + A+GS D T
Sbjct: 103 SGSCFITGSYDRTCKLWDTASGEELNTLEGHRNV-VYAIAFNNPYGDKI--ATGSFDKTC 159
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W + GKC T + + + C+ F+P S+LVA G D A +D++ + V
Sbjct: 160 KLWS--VETGKCYHTFRGHTAE--IVCLSFNP-QSTLVATGSMDTTAKLWDIQNG-EEVY 213
Query: 228 VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GH + + F D ++T D + +W+ + R + GH
Sbjct: 214 TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGH 260
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 49/183 (26%), Positives = 84/183 (45%)
Query: 98 AKLSSLKWKPGTSG-RVL-GSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
A++ SL + TSG R++ GS D+ VV + D +KV I H + S ++ D
Sbjct: 220 AEIISLSFN--TSGDRIITGSFDHTVVVWDADTGRKVNILIG--HCAE-ISSASFN-WDC 273
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
L +GS D T ++WD GKCV+T+ C ++ L+A AD A
Sbjct: 274 SLILTGSMDKTCKLWD--ATNGKCVATLTGHDDEILDSCFDYT---GKLIATASADGTAR 328
Query: 216 AYDV--RKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKG 272
+ RK + + +GH ++ I F L+T +D ++W+ + ++ +G
Sbjct: 329 IFSAATRKCIAKL---EGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEG 385
Query: 273 HVN 275
H +
Sbjct: 386 HTD 388
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/173 (27%), Positives = 80/173 (46%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLE---------KKVPIFERDEHGGRRV-WSVDYSK 152
L W P G +L + D D V +D+ K IF+ E V W V +
Sbjct: 178 LSWNPNKEGLILSASD-DQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLH-- 234
Query: 153 GDPVLGASGSDDGTMQMWDPRCD-GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD 211
D V G+ G DD + +WD R + G + A + V C+ F+P+ ++A G AD
Sbjct: 235 -DGVFGSVG-DDKKLLIWDLRTNVPGHAID-----AHSAEVNCLAFNPYSEFILATGSAD 287
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ HR + +++ + L ++GTD L +W+++
Sbjct: 288 KTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS 340
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D +L A+G ++G +++WD GK + + V + F P GS ++ + DK
Sbjct: 139 DQLLLATGLNNGRIKIWDVYT--GKLLLNLVDHTE--VVRDLTFAPDGSLILVSASRDKT 194
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D++ + + V GH+ V F D L + G + LWN++ +IR +G
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEG 254
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVT---AAGSERG 327
H + + V G LL S +V+++D G + + H F P T A G+
Sbjct: 255 H--HHDVVACDFSPDGALLATASYDTRVYIWDPHTGAILMEFGHLFPPPTPIFAGGANDR 312
Query: 328 FVSSVCWRRVG 338
+V SV + G
Sbjct: 313 WVRSVSFSHDG 323
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 58/221 (26%), Positives = 91/221 (41%)
Query: 118 DYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGG 177
D G+V VP E+ W D +L A+G ++G +++WD G
Sbjct: 110 DCGGIVWGMAFGSSVP--EKQSRSINIEWHHFQFGRDQLLLATGLNNGRIKIWDVYT--G 165
Query: 178 KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVT 237
+ + V + F P GS ++ + DKK +D++ + V V GH V
Sbjct: 166 TLLLNLMDHTD--IVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVLWGHPNRVY 223
Query: 238 YIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
F D L + G + LWN++ +IR +GH N+ V G LL S
Sbjct: 224 SSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLEGHHND--VVSCEFSPDGALLATASY 281
Query: 297 TNQVFVYDVRWGEPVWV--HDF---EPVTAAGSERGFVSSV 332
+V V+D + G + H F P+ A G+ +V SV
Sbjct: 282 DTRVIVWDHQRGSILLELGHLFPPPSPIFAGGANDRWVRSV 322
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 132 (51.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 46/152 (30%), Positives = 67/152 (44%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S SDD T+++WD +CV + V V+FHP G+ + AAG D
Sbjct: 118 DGRLIVSASDDKTVKLWDK--SSRECVHSYCEHGG--FVTYVDFHPSGTCIAAAGM-DNT 172
Query: 214 AYAYDVRKMVDPVLV-FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYK 271
+DVR +L + H V + F L+TA +D LK+ ++ + R++ T
Sbjct: 173 VKVWDVR--THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLH 230
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
GH V S R G G QV V+
Sbjct: 231 GHQGPATTVAFS--RTGEYFASGGSDEQVMVW 260
Score = 111 (44.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 43/161 (26%), Positives = 73/161 (45%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
K+ P GR++ S D V +D + + EHGG V VD+ + A+G D
Sbjct: 114 KFSP--DGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGF-VTYVDFHPSGTCIAAAGMD 170
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
+ T+++WD R + + Q ++ AV + FHP G+ L+ A +D D+ M
Sbjct: 171 N-TVKVWDVRTH--RLLQHYQLHSA--AVNGLSFHPSGNYLITAS-SDSTLKILDL--ME 222
Query: 224 DPVL-VFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVN 262
+L GH+ T + F + + G+D + +W N
Sbjct: 223 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 263
Score = 43 (20.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 48 IEFDPSDSVFATGGIARKIRIY--NIK 72
+ F PS + A+G + +RI+ N+K
Sbjct: 29 VNFSPSGHLLASGSRDKTVRIWVPNVK 55
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 136 (52.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 148 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 205
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 206 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 260
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 261 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 313
>ASPGD|ASPL0000057386 [details] [associations]
symbol:AN1335 species:162425 "Emericella nidulans"
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA]
[GO:0031932 "TORC2 complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0001558 EMBL:BN001308 GO:GO:0031929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045860
GO:GO:0030295 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 GO:GO:0031932 GO:GO:0031234 KO:K08266
EMBL:AACD01000018 HOGENOM:HOG000208395 OrthoDB:EOG4GF6PT
RefSeq:XP_658939.1 ProteinModelPortal:Q5BDP5 STRING:Q5BDP5
EnsemblFungi:CADANIAT00001278 GeneID:2877090 KEGG:ani:AN1335.2
OMA:NDYSEPR Uniprot:Q5BDP5
Length = 393
Score = 136 (52.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 57/203 (28%), Positives = 88/203 (43%)
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
+L +G D T++ W+ G C T+Q S+ C+ P L AAG + K Y
Sbjct: 4 ILCTAGYDH-TIRFWEAL--SGICSRTIQHPDSQVNRLCIT--PDKRYLAAAGHNNVKLY 58
Query: 216 AYDVRKM-VDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
D++ +PV+ F+GH +T + F + +VT+ DG +K+W+ + R Y H
Sbjct: 59 --DIKSTNPNPVMTFEGHTNNITGVAFHCEGKWMVTSSEDGTVKVWDTRTGSLQRNY-AH 115
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVC 333
N V + G L+ G V V+D+ GE V H P V SV
Sbjct: 116 KAPVNDVVIHP-NQGELIS-GDRAGIVRVWDL--GESVCTHQLIPEDDVA-----VHSVS 166
Query: 334 WRRVGEDECTLVAGGSDGLLHVF 356
V D L AG G ++++
Sbjct: 167 ---VASDGSLLCAGNKKGNVYIW 186
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 138 (53.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 51/190 (26%), Positives = 78/190 (41%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
S DG V + L+ + H VW +S SG D ++W D
Sbjct: 320 SSSEDGTVRLWSLQTFTCLVGYKGHN-YPVWDTQFSPYGYYF-VSGGHDRVARLW--ATD 375
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
+ + + + V C FHP S+ VA G AD+ +DV + V +F GH+
Sbjct: 376 HYQPLRIF--AGHLADVNCTRFHP-NSNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGP 431
Query: 236 VTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
+ + F L T TDG + LW++ ++ KGH + L R G +L G
Sbjct: 432 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDT--VCSLRFSRDGEILASG 489
Query: 295 SETNQVFVYD 304
S N V ++D
Sbjct: 490 SMDNTVRLWD 499
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 53/187 (28%), Positives = 89/187 (47%)
Query: 120 DGVVMEYDLEKKVPIFERDEHG-GRRVWSVDY--SKGDPVLGASGSDDGT--MQMWDPRC 174
DG +D + ER G G V +D+ +KG L A+GS D +++WDP+
Sbjct: 238 DGTARVWDFARYTE--ERVLRGHGAEVRCIDWHPTKG---LIATGSRDTQQPVKIWDPK- 291
Query: 175 DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRK 234
G C++T+Q +S+V VEF+ G+ L+ G D YD+R M + + + H+K
Sbjct: 292 -SGSCLATLQEH--KSSVMAVEFNKNGNWLLTGG-RDHLVKMYDIRMMKE-MRTYRAHKK 346
Query: 235 TVTYIRFLDVDT--LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH-GGLL 291
V + + + V+ G DG + W V+ + I + H +++ + W G +L
Sbjct: 347 EVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLE-HAHDQAIWSMK-WHPLGHIL 404
Query: 292 GCGSETN 298
GS N
Sbjct: 405 ATGSNDN 411
Score = 118 (46.6 bits), Expect = 0.00080, P = 0.00080
Identities = 52/216 (24%), Positives = 94/216 (43%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLE-KKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+ +LKW ++ + L S D G V + +F H + + ++ D V
Sbjct: 178 IRALKW--ASNEQWLLSADQGGYVKYWQPNMNNAHMFSA--HKDEAIRGLAFAPTD-VKF 232
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK--AYA 216
A+ SDDGT ++WD + + V C+++HP L+A G D +
Sbjct: 233 ATASDDGTARVWD----FARYTEERVLRGHGAEVRCIDWHPT-KGLIATGSRDTQQPVKI 287
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+D K + H+ +V + F + + L+T G D +K++++ + +RTY+ H
Sbjct: 288 WDP-KSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAH-- 344
Query: 276 NRNFVGLSVWR--HGGLLGCGSETNQVFVYDVRWGE 309
+ + L+ W H GL G + VY + GE
Sbjct: 345 KKEVISLA-WHPIHEGLFVSGGGDGSI-VYWMVDGE 378
>ZFIN|ZDB-GENE-040426-2466 [details] [associations]
symbol:cirh1a "cirrhosis, autosomal recessive 1A
(cirhin)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-2466 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14548 CTD:84916
HOVERGEN:HBG050963 OrthoDB:EOG4JQ3X0 GeneTree:ENSGT00390000008662
HOGENOM:HOG000095656 eggNOG:NOG264702 EMBL:CT025859 EMBL:BC065322
IPI:IPI00510382 RefSeq:NP_998447.1 UniGene:Dr.7926 STRING:Q6P125
Ensembl:ENSDART00000010821 GeneID:406571 KEGG:dre:406571
InParanoid:Q6P125 NextBio:20818130 Uniprot:Q6P125
Length = 685
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 61/265 (23%), Positives = 122/265 (46%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
A + L W G L S +GV+ EYDL + + D +GG +W++ ++ L
Sbjct: 61 AGIEGLTWV----GERLFSAGLNGVITEYDLTNQRVKYTIDAYGGP-IWAITGNQQGTHL 115
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYA 216
A G +DGT+++++ D + + R + + +HP GS +AAG D + +
Sbjct: 116 -AVGCEDGTVKLFEVTEDKIQFERNLDRQKGR--IISLSWHPSGSK-IAAGMMDMIQVFN 171
Query: 217 YDVRKMVDPVLVFDGH-----RKTVTY-IRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTY 270
+ +LV G+ ++ V + + +L T+++ + G +K+W + +I+++
Sbjct: 172 VETGHSKHRILVDRGYGTSRGKECVVWSVVYLSDGTIISGDSVGMVKMWRDDTGTLIKSH 231
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVS 330
++ + + LSV ++ + G T++ FV ++ V ++ + + R
Sbjct: 232 --NITKSDVLSLSVSQNEDSIVAG--TSEGFVVQFQFLSMVLENNEKDWVRTRTFRNHTH 287
Query: 331 SVCWRRVGEDECTLVAGGSDGLLHV 355
V R V E +V+GG D L V
Sbjct: 288 DV--RAVAEITTAVVSGGMDTQLVV 310
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGNLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGNLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGNLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRR--VWSVDYSKGDP 155
L W P SG +L + D D + +D+ E KV + + G V V +
Sbjct: 183 LSWNPNLSGHLLSASD-DHTICLWDISAVPKEGKV-VDAKTIFTGHTAVVEDVSWHLLHE 240
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCAD 211
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G AD
Sbjct: 241 SLFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
K +D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 45/172 (26%), Positives = 82/172 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLE---KKVPIFE-RDEHGGRR--VWSVDYSKGDPV 156
L W P SG +L + D D + +D+ K+ I + + G V V +
Sbjct: 183 LSWNPNLSGNLLSASD-DHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCADK 212
L S +DD + +WD R + +T +PS S A V C+ F+P+ ++A G ADK
Sbjct: 242 LFGSVADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADK 296
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
+D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 297 TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 136 (52.9 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 47/158 (29%), Positives = 77/158 (48%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S S+D T+++WD +CV+ S + V+F+P G+ + +AG +D+
Sbjct: 113 DGRLIVSCSEDKTIKIWDTT--NKQCVNNFSDSVGFANF--VDFNPSGTCIASAG-SDQT 167
Query: 214 AYAYDVRKMVDPVLV-FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYK 271
+DVR V+ +L + H V I F L+TA +DG LK+ ++ + R+I T +
Sbjct: 168 VKVWDVR--VNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 225
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
GH V S + G L G QV ++ + E
Sbjct: 226 GHTGPVFTVSFS--KGGELFASGGADTQVLLWRTNFDE 261
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+S V GSGD + +D + P+ H V +V YS ++ A+GS D T++
Sbjct: 161 SSTMVSGSGDSTARI--WDCDTGTPLHTLKGHTSW-VLAVSYSPNGAMI-ATGSMDNTVR 216
Query: 169 MWDPRCDGGKCVSTVQPSASR--SAVCCVEFH--PFGSSLVAAGCADKKAYAYDV-RKMV 223
+WD + G+ + + +++ +H G +A+ D +DV K
Sbjct: 217 IWDAK--KGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRA 274
Query: 224 DPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
D +V GH+ +VT +R+ + T+ D +K+WN +I+T H + N + LS
Sbjct: 275 D--IVLSGHKGSVTCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALS 332
Score = 113 (44.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/107 (32%), Positives = 51/107 (47%)
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
LV+A D Y +D PV GH+K V ++ F D+ + +AG D +KLWN
Sbjct: 377 LVSAS-DDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGR 435
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
D + I T +GHV S LL S+ + V++VR G+
Sbjct: 436 DGKFITTLRGHVGAVYQCCFSA--DSRLLVSSSKDTTLKVWNVRTGK 480
Score = 50 (22.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 31/146 (21%), Positives = 55/146 (37%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLKWKP 107
+ + P+ ++ ATG + +RI++ K ++SL W+P
Sbjct: 197 VSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKW------------ITSLAWEP 244
Query: 108 ---GTSGRV-LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
SG L S D V +D+ K H G V V + + + S
Sbjct: 245 YHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGS-VTCVRWGGTGKIY--TSSH 301
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASR 189
D T+++W+ + G + T+ A R
Sbjct: 302 DRTIKVWNSQT--GTLIQTLSAHAHR 325
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 140 (54.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 60/261 (22%), Positives = 110/261 (42%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK--GDPVLGASGSDDGTMQ 168
G+ + SG D M +DLEKK I + H G + V K + + SDD T++
Sbjct: 436 GKHIISGSRDKSAMIWDLEKKESIAQLTGHTGV-ISCVALPKKPSTSMFAITASDDRTIK 494
Query: 169 MWD----PRCDGG--------KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+W GG K ++V A + + P + A D
Sbjct: 495 LWKGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSISIAP-NDKIFATASQDSYVKL 553
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGH-- 273
++V + +P+ HR+ V ++ F +D +T DG +K+W+++D ++T +GH
Sbjct: 554 WNVNNL-EPITSIKAHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKG 612
Query: 274 -VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSV 332
V +F+ + ++ SE + +++++ E ++ FE G S +
Sbjct: 613 SVLKASFISFGMQ----IVSVASE-GLIKLWNIKTNE--CLNTFE---------GHESKI 656
Query: 333 CWRRVGEDECTLVAGGSDGLL 353
V +D+ + GGSD L
Sbjct: 657 WALSVAKDQERFITGGSDSKL 677
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 132 (51.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 46/152 (30%), Positives = 67/152 (44%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S SDD T+++WD +CV + V V+FHP G+ + AAG D
Sbjct: 156 DGRLIVSASDDKTVKLWDK--SSRECVHSYCEHGG--FVTYVDFHPSGTCIAAAGM-DNT 210
Query: 214 AYAYDVRKMVDPVLV-FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYK 271
+DVR +L + H V + F L+TA +D LK+ ++ + R++ T
Sbjct: 211 VKVWDVR--THRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLH 268
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
GH V S R G G QV V+
Sbjct: 269 GHQGPATTVAFS--RTGEYFASGGSDEQVMVW 298
Score = 118 (46.6 bits), Expect = 0.00031, P = 0.00031
Identities = 52/196 (26%), Positives = 80/196 (40%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L SG D +M + ++ + + H V V++S +L ASGS D T+++W P
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFTGHKDA-VTCVNFSPSGHLL-ASGSRDKTVRIWVPN 91
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRKMVDPVLVFDG 231
G V + RS C + G S V A DK K +A +K +
Sbjct: 92 VKGESTVFRAHTATVRSVHFCSD----GQSFVTAS-DDKTVKVWATHRQKFL---FSLSQ 143
Query: 232 HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
H V +F D +V+A D +KLW+ + + +Y H +V G
Sbjct: 144 HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHP--SGTC 201
Query: 291 LGCGSETNQVFVYDVR 306
+ N V V+DVR
Sbjct: 202 IAAAGMDNTVKVWDVR 217
Score = 111 (44.1 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 43/161 (26%), Positives = 73/161 (45%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
K+ P GR++ S D V +D + + EHGG V VD+ + A+G D
Sbjct: 152 KFSP--DGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGF-VTYVDFHPSGTCIAAAGMD 208
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
+ T+++WD R + + Q ++ AV + FHP G+ L+ A +D D+ M
Sbjct: 209 N-TVKVWDVRTH--RLLQHYQLHSA--AVNGLSFHPSGNYLITAS-SDSTLKILDL--ME 260
Query: 224 DPVL-VFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVN 262
+L GH+ T + F + + G+D + +W N
Sbjct: 261 GRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN 301
Score = 43 (20.2 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 48 IEFDPSDSVFATGGIARKIRIY--NIK 72
+ F PS + A+G + +RI+ N+K
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVK 93
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 139 (54.0 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 58/222 (26%), Positives = 95/222 (42%)
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H G V+ V +S + L S S+D T+++W D + V V V+F P
Sbjct: 516 HSGP-VYGVSFSPDNKYL-LSCSEDKTVRLWS--LD--TYTALVSYKGHTQPVWDVKFSP 569
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKL 258
G V A D+ A + + P+ +F GH V + F V T +D ++
Sbjct: 570 LGHYFVTAS-HDQTARLW-ATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRM 627
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
W+V+ +R + GH N+ N + +S G L G E + V+D+ G +
Sbjct: 628 WDVHTGNCVRVFLGHTNSVNCLAVSP--DGRWLASGGEDGIICVWDIGSGRRL------- 678
Query: 319 VTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
+ G R + S+ + R D LV+G +D + V+ KK
Sbjct: 679 KSMRGHARASLYSLAFSR---DGTVLVSGCADNSVRVWDVKK 717
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 136 (52.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 47/158 (29%), Positives = 77/158 (48%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S S+D T+++WD +CV+ S + V+F+P G+ + +AG +D+
Sbjct: 155 DGRLIVSCSEDKTIKIWDTT--NKQCVNNFSDSVGFANF--VDFNPSGTCIASAG-SDQT 209
Query: 214 AYAYDVRKMVDPVLV-FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYK 271
+DVR V+ +L + H V I F L+TA +DG LK+ ++ + R+I T +
Sbjct: 210 VKVWDVR--VNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 267
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
GH V S + G L G QV ++ + E
Sbjct: 268 GHTGPVFTVSFS--KGGELFASGGADTQVLLWRTNFDE 303
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 47/164 (28%), Positives = 76/164 (46%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFE-RDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+L +G YD + +D E + R G R D +K L SGS D T+++W+
Sbjct: 361 ILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTK----L-ISGSMDRTIKVWN 415
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
R G+C+ST + R V + H F +S++A+G DK ++ G
Sbjct: 416 WRT--GECISTY--TGHRGGV--IGLH-FDASILASGSVDKTVKIWNFEDK--STFSLRG 466
Query: 232 HRKTVTYIRFLDVDTLVTAGTDGC-LKLWNVNDSRVIRTYKGHV 274
H V +R V + +D C ++LW+++ IRT+ GHV
Sbjct: 467 HTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHV 510
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 135 (52.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 49/191 (25%), Positives = 87/191 (45%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D +L A+G ++G +++WD GK + + V + F P GS ++ + DK
Sbjct: 139 DQLLLATGLNNGRIKIWDVYT--GKLLLNLVDHTE--VVRDLTFAPDGSLILVSASRDKT 194
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D++ + + V GH+ V F D L + G + LW+++ +IR +G
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIRKLEG 254
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVT---AAGSERG 327
H + + V G LL S +V+++D G+ + + H F P T A G+
Sbjct: 255 H--HHDVVACDFSPDGALLATASYDTRVYIWDPHTGDILMEFGHLFPPPTPIFAGGANDR 312
Query: 328 FVSSVCWRRVG 338
+V SV + G
Sbjct: 313 WVRSVSFSHDG 323
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 132 (51.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 48/209 (22%), Positives = 88/209 (42%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ W +++ SG +D V +D + K + F E ++S +S P A
Sbjct: 116 SVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESV---IYSTIWSPHIPGCFA 172
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD + G V V P+ + C ++ + +L+ G D +D+
Sbjct: 173 SASGDQTLRIWDVKSTG---VRIVVPAHQAEILSC-DWCKYNENLLVTGAVDCSLRGWDL 228
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVND-SRVIRTYKGHVNN 276
R + PV GH + ++F L + D ++ WN + ++ T + H
Sbjct: 229 RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEF 288
Query: 277 RNFVGLSVWRHGGLLGCG-SETNQVFVYD 304
+ LS+ + C ET + +YD
Sbjct: 289 TCGLDLSLQSPTQVADCAWDET--IKIYD 315
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 135 (52.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 50/187 (26%), Positives = 84/187 (44%)
Query: 150 YSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
++ GD +L S SDD Q W G+ ++ V +S A+ C +FHP G + G
Sbjct: 316 HATGDYLL--SSSDD---QYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGL-IFGTG 369
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVI 267
D + +D+++ + V F GH +T I F + L TA D +KLW++ +
Sbjct: 370 TMDSQIKIWDLKERTN-VANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNF 428
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT---AAGS 324
+T + NN L + G L G Q+++ +W E + + +T A G
Sbjct: 429 KTLQLD-NNFEVKSLIFDQSGTYLALGGTDVQIYICK-QWTEILHFTEHSGLTTGVAFGH 486
Query: 325 ERGFVSS 331
F++S
Sbjct: 487 HAKFIAS 493
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 132 (51.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 43/165 (26%), Positives = 80/165 (48%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V+ V+++ ++ SGS D T+++W+ + GKCV ++ A + V F+ GS +
Sbjct: 131 VFCVNFNPPSNLI-VSGSFDETIRIWEVKT--GKCVRMIK--AHSMPISSVHFNRDGSLI 185
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
V+A D +D ++ + D V++ +F + T D LKL N
Sbjct: 186 VSAS-HDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYAT 244
Query: 264 SRVIRTYKGHVNNRNFVGLSVWR--HGGLLGCGSETNQVFVYDVR 306
+ ++ Y GH N + F S + +G + GSE N V+++D++
Sbjct: 245 GKFLKVYTGHTN-KVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQ 288
Score = 127 (49.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 42/173 (24%), Positives = 79/173 (45%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
A +S +K+ G +L S D ++ + I + H + + +S D
Sbjct: 44 AAISCVKFS--NDGNLLASASVDKTMILWSATNYSLIHRYEGHSSG-ISDLAWSS-DSHY 99
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S SDD T+++WD R +C+ ++ + V CV F+P S+L+ +G D+ +
Sbjct: 100 TCSASDDCTLRIWDARSPY-ECLKVLR--GHTNFVFCVNFNP-PSNLIVSGSFDETIRIW 155
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
+V K V + H ++ + F D +V+A DG K+W+ + ++T
Sbjct: 156 EV-KTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKT 207
Score = 107 (42.7 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 42/165 (25%), Positives = 73/165 (44%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SG +D + ++++ + H + SV +++ D L S S DG+ ++WD +
Sbjct: 145 SGSFDETIRIWEVKTGKCVRMIKAHS-MPISSVHFNR-DGSLIVSASHDGSCKIWDAK-- 200
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSS-LVAAGCADKKAYAYDVRKMVDPVLVFDGHRK 234
G C+ T+ S AV +F P G LVA + K Y K + V+ GH
Sbjct: 201 EGTCLKTLIDDKS-PAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLK---VYTGHTN 256
Query: 235 TVTYIRFLDVDT----LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
V I T +V+ D C+ LW++ +++ +GH +
Sbjct: 257 KVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTD 301
Score = 46 (21.3 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS 73
+ F+P ++ +G IRI+ +K+
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKT 159
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 116 (45.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 45/165 (27%), Positives = 70/165 (42%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK-GDPVLG 158
++SL + P SG +L SG D V +D+ + + + + ++ GD L
Sbjct: 253 ITSLNFFPN-SGHLLLSGSADSTVKIWDVYHQRELLRTYSGHSKSLSDTTFNTHGDKFLS 311
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP---FGSSLVAAGCADKKAY 215
AS D M++WD + GKC++ + V F+P G VA G +D K
Sbjct: 312 ASF--DRMMKLWDT--ETGKCIAKFTTGKTPHVV---RFNPTSELGHEFVA-GMSDNKIV 363
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLW 259
+D R + V +D H V I F D +T D L+ W
Sbjct: 364 QFDTRAGNETVQEYDHHLGPVNTITFCDDGRRFMTTSDDRTLRAW 408
Score = 62 (26.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 25/105 (23%), Positives = 44/105 (41%)
Query: 252 TDGCLKLWNVNDS-RVIR--TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+D + +++ ND R R +Y+GH N + + + + G L G V +D W
Sbjct: 444 SDNQIVVYSSNDKFRQNRKKSYRGHNNAGSAIDIDISADGQFLASGDTGGYVAFWD--WK 501
Query: 309 EPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLL 353
H + E G VS V W ++ + GG+ G++
Sbjct: 502 SCKMFHKIQV------EDGQVSCVKWHP--QESSKVATGGASGII 538
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 134 (52.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 50/187 (26%), Positives = 83/187 (44%)
Query: 150 YSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
++ GD +L S SDD Q W G+ ++ V S ++ C +FHP G + G
Sbjct: 315 HATGDYLL--SSSDD---QYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGL-IFGTG 368
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVI 267
D + +D+++ + V F GH +T I F + L TA D +KLW++ +
Sbjct: 369 TMDSQIKIWDLKERTN-VANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT---AAGS 324
+T + NN L + G L G Q+++ +W E + + VT A G
Sbjct: 428 KTLQLD-NNFEVKSLIFDQSGTYLALGGTDVQIYICK-QWTEILHFTEHSGVTTGVAFGH 485
Query: 325 ERGFVSS 331
F++S
Sbjct: 486 HAKFIAS 492
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 131 (51.2 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 34/113 (30%), Positives = 60/113 (53%)
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDG 254
+F GS L +AG D++ + ++V + V GH+ + ++F D LV+AGTD
Sbjct: 43 QFSSDGSFLASAGY-DQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLVSAGTDK 101
Query: 255 CLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG-SETNQVFVYDVR 306
+++W++ IR +K H + N V ++ R G + C S+ V V+D+R
Sbjct: 102 TVRVWDMETGSCIRNFKSHTDIVNSVDVN--RRGPQMICSASDDGTVMVHDMR 152
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 135 (52.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 48/166 (28%), Positives = 74/166 (44%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP----SASRSAVCCVEFHPF 200
VW +S AS S D T ++W + +QP + S V CV++HP
Sbjct: 463 VWDAQFSPFGHYF-ASCSHDRTARIWS--------MDRIQPLRIMAGHLSDVDCVQWHP- 512
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLW 259
+ +A G +DK +DV+ + V +F GHR V + + +G DG + +W
Sbjct: 513 NCNYIATGSSDKTVRLWDVQTG-ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW 571
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+++ +R I GH N LS G LL GS V ++DV
Sbjct: 572 DLSTARCITPLMGH--NSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 43/170 (25%), Positives = 80/170 (47%)
Query: 140 HGGRRVWSVDYSK-GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
H G V+S +S GD VL S S D T+++W + + + V V +F
Sbjct: 417 HSGP-VYSATFSPPGDFVL--SSSADTTIRLWSTKLNA----NLVCYKGHNYPVWDAQFS 469
Query: 199 PFGSSLVAAGCA-DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCL 256
PFG A C+ D+ A + + + + P+ + GH V +++ + + + T +D +
Sbjct: 470 PFGHYF--ASCSHDRTARIWSMDR-IQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTV 526
Query: 257 KLWNVNDSRVIRTYKGHVNNRNFV-GLSVWRHGGLLGCGSETNQVFVYDV 305
+LW+V +R + GH R+ V L++ G + G E + ++D+
Sbjct: 527 RLWDVQTGECVRIFIGH---RSMVLSLAMSPDGRYMASGDEDGTIMMWDL 573
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 130 (50.8 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 48/209 (22%), Positives = 87/209 (41%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ W +++ SG +D V +D + + F E ++S +S P A
Sbjct: 111 SVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESV---IYSTIWSPHIPGCFA 167
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD + G V V P+ + C ++ + +LV G D +D+
Sbjct: 168 SASGDQTLRIWDVKTTG---VRIVIPAHQTEILSC-DWCKYNENLVVTGAVDCSLRGWDL 223
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVND-SRVIRTYKGHVNN 276
R + PV GH + ++F L + D ++ WN + ++ T + H
Sbjct: 224 RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEF 283
Query: 277 RNFVGLSVWRHGGLLGCG-SETNQVFVYD 304
+ LS+ + C ET + +YD
Sbjct: 284 TCGLDLSLQSPTQVADCSWDET--IKIYD 310
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 133 (51.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 49/180 (27%), Positives = 79/180 (43%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI-FERDEHGGRRVWSVDYSKGDPVLGAS 160
+L W +G + GS D + + D + P+ + HG + + K + G S
Sbjct: 218 ALDWVDN-NGFLSGSNDAQIALWQVD-KSSTPLQLFKGHHGA--INDISSIKEKHLFG-S 272
Query: 161 GSDDGTMQMWDPRCDGGKC--VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SDD T Q D R + V TV+ S ++ C++FHP +L A G D YD
Sbjct: 273 VSDDSTTQFHDTRVNATDINPVITVENSHIQN---CIQFHPDIQTLYATGGKDNVVSLYD 329
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+R P F GH +V +++ + D LV+ G D + W++ + TY +N
Sbjct: 330 IRNYSTPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDATSN 389
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 133 (51.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 49/180 (27%), Positives = 79/180 (43%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI-FERDEHGGRRVWSVDYSKGDPVLGAS 160
+L W +G + GS D + + D + P+ + HG + + K + G S
Sbjct: 218 ALDWVDN-NGFLSGSNDAQIALWQVD-KSSTPLQLFKGHHGA--INDISSIKEKHLFG-S 272
Query: 161 GSDDGTMQMWDPRCDGGKC--VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SDD T Q D R + V TV+ S ++ C++FHP +L A G D YD
Sbjct: 273 VSDDSTTQFHDTRVNATDINPVITVENSHIQN---CIQFHPDIQTLYATGGKDNVVSLYD 329
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+R P F GH +V +++ + D LV+ G D + W++ + TY +N
Sbjct: 330 IRNYSTPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDLKNLDEDFTYPDATSN 389
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 133 (51.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 52/189 (27%), Positives = 84/189 (44%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
S+ + P +G+ L SG D V +DL + P F H R W S+ +S L A
Sbjct: 121 SVAFSP--TGKYLASGSGDTTVRFWDLSTETPHFTCKGH---RHWVLSISWSPDGKKL-A 174
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS----LVAAGCADKKAY 215
SG +G + +WDP G V S+ + + + P + VA+ D
Sbjct: 175 SGCKNGQILLWDPST--GTQVGRTLTGHSKW-ITGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 216 AYDVRK-MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D + +L GH ++VT +R+ L +A D +K+W +D + RT +GH
Sbjct: 232 VWDTTAGRCERILT--GHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 289
Query: 275 NNRNFVGLS 283
+ N + LS
Sbjct: 290 HWVNTMALS 298
>ZFIN|ZDB-GENE-040426-1049 [details] [associations]
symbol:pwp1 "PWP1 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1049
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:11137 GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:CU571163 EMBL:BC049457 IPI:IPI00497637 RefSeq:NP_956586.1
UniGene:Dr.79178 STRING:Q7ZWE1 Ensembl:ENSDART00000003790
GeneID:393262 KEGG:dre:393262 InParanoid:Q7ZWE1 NextBio:20814321
Uniprot:Q7ZWE1
Length = 490
Score = 133 (51.9 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS S D T+ +WD + GK +T+ + V ++FHPF + + +G DK YD
Sbjct: 271 ASASADETVILWD--LEKGKPAATLAKHTDK--VQTLKFHPFEAQTLISGSFDKSVILYD 326
Query: 219 VRKMVDPVLV--FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
R D + F G + VT+ F + L + DG + + + + T + H
Sbjct: 327 CRSPDDSHRIWRFSGQVERVTWDHFSPCNFLAST-EDGFIYCLDARSDKPVFTLRAHDGE 385
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVH 314
+ + LS G L+ C ++ + V ++D+ +P +H
Sbjct: 386 VSGMDLSSQIRGCLVTCSADKH-VKIWDILGNKPNLIH 422
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 132 (51.5 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 51/191 (26%), Positives = 86/191 (45%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D +L A+G ++G +++WD GK + + V + F P GS ++ + DK
Sbjct: 139 DQLLLATGLNNGRIKIWDVYT--GKLLLNLMDHTE--VVRDLTFAPDGSLILVSASRDKT 194
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D++ + + V GH+ V F D L + G + LW+++ +IR +G
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEG 254
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVT---AAGSERG 327
H N+ V G LL S +V+V+D G + + H F P T A G+
Sbjct: 255 HHND--VVACEFSPDGALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIFAGGANDR 312
Query: 328 FVSSVCWRRVG 338
+V SV + G
Sbjct: 313 WVRSVSFSHDG 323
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 132 (51.5 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 51/191 (26%), Positives = 86/191 (45%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D +L A+G ++G +++WD GK + + V + F P GS ++ + DK
Sbjct: 139 DQLLLATGLNNGRIKIWDVYT--GKLLLNLMDHTE--VVRDLTFAPDGSLILVSASRDKT 194
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D++ + + V GH+ V F D L + G + LW+++ +IR +G
Sbjct: 195 LRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEG 254
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVT---AAGSERG 327
H N+ V G LL S +V+V+D G + + H F P T A G+
Sbjct: 255 HHND--VVACEFSPDGALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIFAGGANDR 312
Query: 328 FVSSVCWRRVG 338
+V SV + G
Sbjct: 313 WVRSVSFSHDG 323
>MGI|MGI:1926139 [details] [associations]
symbol:Wsb1 "WD repeat and SOCS box-containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:1926139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ ChiTaRS:WSB1 EMBL:AF033186 IPI:IPI00119829
RefSeq:NP_062627.3 UniGene:Mm.307022 UniGene:Mm.474790
ProteinModelPortal:O54927 SMR:O54927 IntAct:O54927 STRING:O54927
PhosphoSite:O54927 PRIDE:O54927 Ensembl:ENSMUST00000017821
GeneID:78889 KEGG:mmu:78889 InParanoid:O54927 NextBio:349672
Bgee:O54927 CleanEx:MM_WSB1 Genevestigator:O54927
GermOnline:ENSMUSG00000017677 Uniprot:O54927
Length = 421
Score = 132 (51.5 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D +L A+G ++G +++WD GK + + V + F P GS L+ + DK
Sbjct: 139 DQLLLATGLNNGRIKIWDVYT--GKLLLNLVDHIEM--VRDLTFAPDGSLLLVSASRDKT 194
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D++ + V V H+ V F D L + G + LWN++ +IR +G
Sbjct: 195 LRVWDLKDDGNMVKVLRAHQNWVYSCAFSPDCSMLCSVGASKAVFLWNMDKYTMIRKLEG 254
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFE---PVTAAGSERG 327
H + + V G LL S +V+V+D G+ + + H F P+ A G+
Sbjct: 255 H--HHDVVACDFSPDGALLATASYDTRVYVWDPHNGDLLMEFGHLFPSPTPIFAGGANDR 312
Query: 328 FVSSVCWRRVG 338
+V +V + G
Sbjct: 313 WVRAVSFSHDG 323
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 130 (50.8 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 46/180 (25%), Positives = 77/180 (42%)
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
P L ++++ P + + SG DG + Y +E D G+ S+ YS
Sbjct: 127 PVDLWTVQFSP--CNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKY 184
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASG+ DG + ++D GK V T++ A C F P S L+ D
Sbjct: 185 I-ASGAIDGIITIFDVAA--GKVVQTLEGHAMPVRSLC--FSP-NSQLLLTASDDGHMKL 238
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
YDV D V GH V + F D ++ +D +K+W+ ++ + + T+ H +
Sbjct: 239 YDVTHS-DVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTD 297
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 53/212 (25%), Positives = 89/212 (41%)
Query: 109 TSGRVLGSGDYDGVVMEYDL---EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
+ G+ + S D + +D +KK + G +W+V +S + + SG +DG
Sbjct: 95 SDGQTIASSSLDSTMCLWDARSGDKKHLL----SFGPVDLWTVQFSPCNKYV-ISGLNDG 149
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
+ M+ + GK T+ + + + + P G +A+G D +DV
Sbjct: 150 KISMYS--VETGKAEQTLDAQNGKYTLS-IAYSPDGK-YIASGAIDGIITIFDVAAG-KV 204
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
V +GH V + F + L+TA DG +KL++V S V+ T GH + V S
Sbjct: 205 VQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFS- 263
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF 316
G S N V ++D E +H F
Sbjct: 264 -EDGKHFASSSSDNSVKIWDT--SERKCLHTF 292
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 138 (53.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 57/211 (27%), Positives = 91/211 (43%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ S+ + P G+ L SG YD V +D + D H G V S+ +S +L A
Sbjct: 753 VESVVFSP--DGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGT-VESLAFSPDGKLL-A 808
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+ +WD G+ + T + ++ V F P G L +A D +D+
Sbjct: 809 SGSYDNTIDLWDSAT--GELLQTFE--GHPHSIWSVAFAPDGKELASAS-DDSTIKIWDL 863
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D H ++V + F D L ++ D +K+WN + ++ +G
Sbjct: 864 ATG-ELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVK 922
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G L GSE N V +++ GE
Sbjct: 923 SVAFSP--DGKKLASGSEKNTVKLWNPATGE 951
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 59/215 (27%), Positives = 97/215 (45%)
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
P + S+ + P G+ L S D + +DL D H + V SV +S +
Sbjct: 834 PHSIWSVAFAP--DGKELASASDDSTIKIWDLATGELQQTLDSHS-QSVRSVAFSPDGKL 890
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAY 215
L AS S D T+++W+P G+ +++ RS V V F P G L A+G ++K
Sbjct: 891 L-ASSSLDSTIKVWNPAT--GELQQSLE---GRSGWVKSVAFSPDGKKL-ASG-SEKNTV 942
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+ + +GH ++V + F D L ++ +D +KLWN + +T+KGH
Sbjct: 943 KLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHD 1002
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G L GS+ N + ++D+ E
Sbjct: 1003 LWIRAVAFSP--DGKHLVSGSDDNTIKLWDLATSE 1035
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 58/214 (27%), Positives = 94/214 (43%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+ SL + P G++L SG YD + +D + + FE H +WSV ++ L
Sbjct: 795 VESLAFSP--DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHS---IWSVAFAPDGKEL 849
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAY 215
AS SDD T+++WD G+ T+ S S+S V V F P G L+A+ D K +
Sbjct: 850 -ASASDDSTIKIWDLAT--GELQQTLD-SHSQS-VRSVAFSPDGK-LLASSSLDSTIKVW 903
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
++ + G K+V + D L + +KLWN +++T +GH
Sbjct: 904 NPATGELQQSLEGRSGWVKSVAFSP--DGKKLASGSEKNTVKLWNPATGELLQTLEGHSQ 961
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ V S G L S + +++ GE
Sbjct: 962 SVRSVAFSP--DGKQLASSSSDTTIKLWNSTTGE 993
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 127 (49.8 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 44/159 (27%), Positives = 77/159 (48%)
Query: 111 GRVLGS-GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
GR++ S GD D V +D I ++GG + VD++ + +SG+D+ T+++
Sbjct: 156 GRLIASCGD-DRTVRLWDTSSHQCINIFTDYGGSATF-VDFNSSGTCIASSGADN-TIKI 212
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD R + K + + + V C FHP G+ L++ G +D D +++ L++
Sbjct: 213 WDIRTN--KLIQHYK--VHNAGVNCFSFHPSGNYLIS-GSSDSTIKILD---LLEGRLIY 264
Query: 230 D--GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN-DS 264
GH+ V + F D D + G D + +W N DS
Sbjct: 265 TLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDS 303
Score = 115 (45.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 55/244 (22%), Positives = 109/244 (44%)
Query: 110 SGRVLGSGDYDGVVMEY--DLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
SG ++ S D V + ++ + +F+ H V SV +S+ L + SDD ++
Sbjct: 71 SGSLVASSSRDQTVRLWTPSIKGESTVFKA--HTAS-VRSVHFSRDGQRL-VTASDDKSV 126
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W + K + ++ + + V C F P G + + G D+ +D +
Sbjct: 127 KVWG--VERKKFLYSL--NRHTNWVRCARFSPDGRLIASCG-DDRTVRLWDTSSH-QCIN 180
Query: 228 VFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+F + + T++ F T + ++G D +K+W++ +++I+ YK H N S
Sbjct: 181 IFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVH--NAGVNCFSFHP 238
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVA 346
G L GS + + + D+ G ++ T G +G V +V + R G+ +
Sbjct: 239 SGNYLISGSSDSTIKILDLLEGRLIY-------TLHG-HKGPVLTVTFSRDGD---LFAS 287
Query: 347 GGSD 350
GG+D
Sbjct: 288 GGAD 291
Score = 47 (21.6 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNI 71
I +F+P++ ATG + + I+N+
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNL 47
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 132 (51.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 42/168 (25%), Positives = 78/168 (46%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLE---KKVPIFE-RDEHGGRR--VWSVDYSKGDPV 156
L W P SG +L + D D + +D+ K+ I + + G V V +
Sbjct: 183 LSWNPNLSGCLLSASD-DHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHES 241
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L S +DD + +WD R + S A + V C+ F+P+ ++A G ADK
Sbjct: 242 LFGSVADDQKLMIWDTRSNNTSKPSHAV-DAHTAEVNCLSFNPYSEFILATGSADKTVAL 300
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
+D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 301 WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 348
>ASPGD|ASPL0000003994 [details] [associations]
symbol:AN6160 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0031124 "mRNA 3'-end processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006397 EMBL:BN001301 EMBL:AACD01000105 KO:K15542
RefSeq:XP_663764.1 ProteinModelPortal:Q5AZX0 STRING:Q5AZX0
EnsemblFungi:CADANIAT00006850 GeneID:2870757 KEGG:ani:AN6160.2
HOGENOM:HOG000213918 OMA:RDICILR OrthoDB:EOG4QVGMD Uniprot:Q5AZX0
Length = 567
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/158 (26%), Positives = 73/158 (46%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG--AS 160
L W P + + L + D D + YD + H W V P G S
Sbjct: 161 LAWSPSDT-KFLSASD-DTTLKIYDFTARTCDTVLTGHN----WDVKSCDWHPTKGLLVS 214
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GS D ++ WDPR +C++T+ + ++ V +F ++L+A D+ A +D+R
Sbjct: 215 GSKDHQVKFWDPRT--ARCLTTLH--SHKNTVTATKFSRVNNNLLATSSRDQTARVFDLR 270
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGT-DGCL 256
M D + + GH K ++ + + V +L++ G+ DG L
Sbjct: 271 MMRD-ICILRGHEKPISTLTWHPVHCSLISTGSEDGSL 307
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/209 (22%), Positives = 87/209 (41%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ W +++ SG +D V +D + + F E ++S +S P A
Sbjct: 111 SVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESV---IYSTIWSPHIPGCFA 167
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD + G V V P+ + C ++ + +LV G D +D+
Sbjct: 168 SASGDQTLRIWDVKTAG---VRIVIPAHQTEILSC-DWCKYNENLVVTGAVDCSLRGWDL 223
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVND-SRVIRTYKGHVNN 276
R + PV GH + ++F L + D ++ WN + ++ T + H
Sbjct: 224 RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEF 283
Query: 277 RNFVGLSVWRHGGLLGCG-SETNQVFVYD 304
+ LS+ + C ET + +YD
Sbjct: 284 TCGLDLSLQSPTEVADCSWDET--IKIYD 310
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/189 (27%), Positives = 84/189 (44%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
S+ + P +G+ L SG D V +DL + P F H R W S+ +S L A
Sbjct: 119 SVAFSP--TGKYLASGSGDTTVRFWDLSTETPHFTCKGH---RHWVLSISWSPDGKKL-A 172
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS----LVAAGCADKKAY 215
SG +G + +WDP G V S+ + + + P + VA+ D
Sbjct: 173 SGCKNGQVLLWDPST--GLQVGRTLTGHSKW-ITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 216 AYDVRK-MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D + +L GH ++VT +R+ L +A D +K+W +D + RT +GH
Sbjct: 230 VWDTTAGRCERILT--GHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHG 287
Query: 275 NNRNFVGLS 283
+ N + LS
Sbjct: 288 HWVNTMALS 296
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 43/178 (24%), Positives = 78/178 (43%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ W +++ SG +D V +D + K + F E ++S +S P A
Sbjct: 116 SVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHES---IIYSTIWSPHIPGCFA 172
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD + G V V P+ + C ++ + +L+ G D +D+
Sbjct: 173 SASGDQTLRIWDVKAAG---VRIVIPAHQAEILSC-DWCKYNENLLVTGAVDCSLRGWDL 228
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVN--DSRVIRTYKGH 273
R + PV GH + ++F L + D ++ WN + DS ++ T + H
Sbjct: 229 RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDS-LLETVEHH 285
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 120 (47.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 50/209 (23%), Positives = 91/209 (43%)
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
P S+ + P + L +G + G V + +E + D G + + S+ YS
Sbjct: 106 PVDAWSVAFSPDSQH--LATGSHVGKVNIFGVETGKKEYSLDTRG-KFILSIAYSPDGKY 162
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASG+ DG + ++D GK + T++ A + + F P LV A D
Sbjct: 163 L-ASGAIDGIINIFDIAT--GKLLHTLEGHAM--PIRSLTFSPDSQLLVTAS-DDGYIKI 216
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
Y+V+ GH V + F DT V++ +D +K+W+V+ + T+ H +
Sbjct: 217 YEVQH-ASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQD 275
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
G+ ++G + ++ ++ VYD
Sbjct: 276 Q--VWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 112 (44.5 bits), Expect = 0.00086, P = 0.00086
Identities = 44/166 (26%), Positives = 71/166 (42%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SG ++ S D + +DLE I D G WSV +S L A+GS G + +
Sbjct: 75 SGNIMASSSLDAHIRLWDLESGKQIRAIDA-GPVDAWSVAFSPDSQHL-ATGSHVGKVNI 132
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL-V 228
+ + GK ++ + + + P G L A+G D +D+ +L
Sbjct: 133 FG--VETGKKEYSLDTRGK--FILSIAYSPDGKYL-ASGAIDGIINIFDIA--TGKLLHT 185
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+GH + + F D LVTA DG +K++ V + + T GH
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGH 231
Score = 47 (21.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/31 (29%), Positives = 20/31 (64%)
Query: 45 IGVIEFD--PSDSVFATGGIARKIRIYNIKS 73
+GV+ D PS ++ A+ + IR+++++S
Sbjct: 65 LGVVSVDVSPSGNIMASSSLDAHIRLWDLES 95
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 48/171 (28%), Positives = 85/171 (49%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKV---PIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
SG++ +G + + + +DL K+V ++E D V +V SK D L ASG DG+
Sbjct: 27 SGKLAITGCGERISI-WDLRKQVLNQSLYEEDIKA--EVTNVCLSK-DGALLASGYSDGS 82
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++W + V + R +V + F+ G+ LV+ G D + +D+ + +
Sbjct: 83 IRIWSMSDYQLQAVF----NGHRGSVTTMTFNRLGNILVS-GSKDTEVIVWDI--ITESG 135
Query: 227 LV-FDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
L GHR +T ++ L+ L+T+ DG +K+W+ I+T GH N
Sbjct: 136 LFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRN 186
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/172 (28%), Positives = 74/172 (43%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM--W 170
V GS D+ V Y+ +KV FE H + ++ P L S SDD T++ W
Sbjct: 72 VCGSDDFQVRVYNYNTGEKVTQFEA--HPDY-IRALVVHPTQPFLLTS-SDDMTIKCFNW 127
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D KCV T + SR V + +P ++ A+ C D + V
Sbjct: 128 DM---SWKCVQTFE-GHSRY-VMSLAINPKDTNTFASSCLDGTVKVWSFGSSVAN-FTLQ 181
Query: 231 GHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
H + V Y+ + D L+TAG D +K+W+ +R +GH NN +F
Sbjct: 182 AHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVRILEGHTNNVSF 233
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 54/249 (21%), Positives = 102/249 (40%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SG +D V +DL I H V+SV +S + + S S D T+++W+
Sbjct: 89 SGSWDHSVRLWDLSLGETIRSFIGHTSD-VFSVSFSPDNRQI-VSASRDKTIKLWNTLA- 145
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVRKMVDPVLVFDGHRK 234
+C T+ + CV F P + + C DK +++ K D +GH
Sbjct: 146 --QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNL-KNCDLNKNLEGHTG 202
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK--GHVNNRNFVGLSVWRHGGLL 291
+ + D + G DG KLW+V + + + + + +N+ F W
Sbjct: 203 VLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPCDYWL----- 257
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
C + + ++++ + + + PV + + +S+ W G+ L G +DG
Sbjct: 258 -CAATDRFIRIWNLE--SKLIISEIYPVKQSKIGVPWCTSLTWSANGQ---LLYCGSTDG 311
Query: 352 LLHVFVGKK 360
++V+ KK
Sbjct: 312 NIYVYEVKK 320
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 54/249 (21%), Positives = 102/249 (40%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SG +D V +DL I H V+SV +S + + S S D T+++W+
Sbjct: 89 SGSWDHSVRLWDLSLGETIRSFIGHTSD-VFSVSFSPDNRQI-VSASRDKTIKLWNTLA- 145
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVRKMVDPVLVFDGHRK 234
+C T+ + CV F P + + C DK +++ K D +GH
Sbjct: 146 --QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNL-KNCDLNKNLEGHTG 202
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK--GHVNNRNFVGLSVWRHGGLL 291
+ + D + G DG KLW+V + + + + + +N+ F W
Sbjct: 203 VLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPCDYWL----- 257
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
C + + ++++ + + + PV + + +S+ W G+ L G +DG
Sbjct: 258 -CAATDRFIRIWNLE--SKLIISEIYPVKQSKIGVPWCTSLTWSANGQ---LLYCGSTDG 311
Query: 352 LLHVFVGKK 360
++V+ KK
Sbjct: 312 NIYVYEVKK 320
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/169 (24%), Positives = 81/169 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLE---KKVPIFE-RDEHGGRR--VWSVDYSKGDPV 156
L W P +G +L + D D + +D+ K+ + + ++ G V V +
Sbjct: 187 LSWNPNLNGYLLSASD-DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHES 245
Query: 157 LGASGSDDGTMQMWDPRCDG-GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
L S +DD + +WD R + K TV A + V C+ F+P+ ++A G ADK
Sbjct: 246 LFGSVADDQKLMIWDTRNNNTSKPSHTVD--AHTAEVNCLSFNPYSEFILATGSADKTVA 303
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
+D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 304 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/187 (26%), Positives = 83/187 (44%)
Query: 150 YSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
++ GD +L S SDD Q W G+ ++ V S ++ C +FHP G + G
Sbjct: 315 HATGDYLL--SSSDD---QYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGL-IFGTG 368
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVI 267
D + +D+++ + V F GH +T I F + L TA D +KLW++ +
Sbjct: 369 TMDSQIKIWDLKERTN-VANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT---AAGS 324
+T + NN L + G L G Q+++ +W E + + +T A G
Sbjct: 428 KTLQLD-NNFEVKSLIFDQSGTYLALGGTDVQIYICK-QWTEILHFTEHSGLTTGVAFGH 485
Query: 325 ERGFVSS 331
F++S
Sbjct: 486 HAKFIAS 492
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/187 (26%), Positives = 83/187 (44%)
Query: 150 YSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
++ GD +L S SDD Q W G+ ++ V S ++ C +FHP G + G
Sbjct: 315 HATGDYLL--SSSDD---QYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGL-IFGTG 368
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVI 267
D + +D+++ + V F GH +T I F + L TA D +KLW++ +
Sbjct: 369 TMDSQIKIWDLKERTN-VANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT---AAGS 324
+T + NN L + G L G Q+++ +W E + + +T A G
Sbjct: 428 KTLQLD-NNFEVKSLIFDQSGTYLALGGTDVQIYICK-QWTEILHFTEHSGLTTGVAFGH 485
Query: 325 ERGFVSS 331
F++S
Sbjct: 486 HAKFIAS 492
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/187 (26%), Positives = 83/187 (44%)
Query: 150 YSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
++ GD +L S SDD Q W G+ ++ V S ++ C +FHP G + G
Sbjct: 315 HATGDYLL--SSSDD---QYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGL-IFGTG 368
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVI 267
D + +D+++ + V F GH +T I F + L TA D +KLW++ +
Sbjct: 369 TMDSQIKIWDLKERTN-VANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT---AAGS 324
+T + NN L + G L G Q+++ +W E + + +T A G
Sbjct: 428 KTLQLD-NNFEVKSLIFDQSGTYLALGGTDVQIYICK-QWTEILHFTEHSGLTTGVAFGH 485
Query: 325 ERGFVSS 331
F++S
Sbjct: 486 HAKFIAS 492
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/187 (26%), Positives = 83/187 (44%)
Query: 150 YSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
++ GD +L S SDD Q W G+ ++ V S ++ C +FHP G + G
Sbjct: 315 HATGDYLL--SSSDD---QYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGL-IFGTG 368
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVI 267
D + +D+++ + V F GH +T I F + L TA D +KLW++ +
Sbjct: 369 TMDSQIKIWDLKERTN-VANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT---AAGS 324
+T + NN L + G L G Q+++ +W E + + +T A G
Sbjct: 428 KTLQLD-NNFEVKSLIFDQSGTYLALGGTDVQIYICK-QWTEILHFTEHSGLTTGVAFGH 485
Query: 325 ERGFVSS 331
F++S
Sbjct: 486 HAKFIAS 492
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/187 (26%), Positives = 83/187 (44%)
Query: 150 YSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
++ GD +L S SDD Q W G+ ++ V S ++ C +FHP G + G
Sbjct: 315 HATGDYLL--SSSDD---QYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGL-IFGTG 368
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVI 267
D + +D+++ + V F GH +T I F + L TA D +KLW++ +
Sbjct: 369 TMDSQIKIWDLKERTN-VANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNF 427
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT---AAGS 324
+T + NN L + G L G Q+++ +W E + + +T A G
Sbjct: 428 KTLQLD-NNFEVKSLIFDQSGTYLALGGTDVQIYICK-QWTEILHFTEHSGLTTGVAFGH 485
Query: 325 ERGFVSS 331
F++S
Sbjct: 486 HAKFIAS 492
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 49/187 (26%), Positives = 83/187 (44%)
Query: 150 YSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
++ GD +L S SDD Q W G+ ++ V S ++ C +FHP G + G
Sbjct: 324 HATGDYLL--SSSDD---QYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGL-IFGTG 377
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVI 267
D + +D+++ + V F GH +T I F + L TA D +KLW++ +
Sbjct: 378 TMDSQIKIWDLKERTN-VANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNF 436
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT---AAGS 324
+T + NN L + G L G Q+++ +W E + + +T A G
Sbjct: 437 KTLQLD-NNFEVKSLIFDQSGTYLALGGTDVQIYICK-QWTEILHFTEHSGLTTGVAFGH 494
Query: 325 ERGFVSS 331
F++S
Sbjct: 495 HAKFIAS 501
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 60/256 (23%), Positives = 105/256 (41%)
Query: 111 GRVLGSGDYDGVVMEY---DLEKKVPIFERDEHGGRRVW----SVDYSK--GDPVLGASG 161
G+ + +G++ G + +LE+K+ + + G W ++ S V SG
Sbjct: 209 GQTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGATLPESNVSESAVNFVSG 268
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+G + +W D + ++T++ + R VC EFHP G +A+ D +DV
Sbjct: 269 GGEGNVCLWS--LDKDQPLATLEGHSGR--VCRTEFHPSGK-YIASASYDTTWRLWDVET 323
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ L +GH + V + F D L + G D ++W++ R + +GH+ R
Sbjct: 324 TAELQLQ-EGHSREVYTVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHI--REIF 380
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
GL G + GS V +D+R + G+ + VS V W + E
Sbjct: 381 GLDWGVDGYRVLSGSGDGWVKCWDLR--------QVKNTGGIGAHKSVVSDVRWYKGSES 432
Query: 341 ECTL-VAGGSDGLLHV 355
L G G + V
Sbjct: 433 ASFLPTTEGQPGRMDV 448
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 49/172 (28%), Positives = 78/172 (45%)
Query: 147 SVDYSK-GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
S+D SK G+ +L SGSDDGT+ +WDPR ++ +AV E G+ +
Sbjct: 150 SLDISKRGEEIL-FSGSDDGTIGIWDPRKK--HAADYIESDFPVTAVAISEA---GNEIY 203
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND- 263
+ G D +DVRK V GHR T+T ++ D +L++ D + W++
Sbjct: 204 SGGI-DNDIKVWDVRKKA-VVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPF 261
Query: 264 ---SRVIRTYKGHVNN--RNFVGLSVW-RHGGLLGCGSETNQVFVYDVRWGE 309
R IRT+ G +N V W + G + G+ V ++ G+
Sbjct: 262 APTERHIRTFDGAPMGIEKNLVR-GGWDKEGKRVAMGAADGTVVIWSNETGK 312
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 44/151 (29%), Positives = 76/151 (50%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S S+D T+++WD +CV+ S + V+F+P G+ + +AG +D
Sbjct: 155 DGRLIVSCSEDKTIKIWDTT--NKQCVNNFSDSVGFANF--VDFNPNGTCIASAG-SDHA 209
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D+R M + + H V + F + ++LVTA +DG +K+ ++ + R+I T +G
Sbjct: 210 VKIWDIR-MNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQG 268
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
H V S + G LL G QV ++
Sbjct: 269 HTGPVFTVSFS--KDGELLTSGGADAQVLIW 297
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 134 (52.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 58/237 (24%), Positives = 103/237 (43%)
Query: 90 CDYYICTPAKLS-SLKWKPGTSGRVL-GSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWS 147
C Y + ++ SL +SG VL +G D V ++ K I H G + +
Sbjct: 393 CSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGD-ILA 451
Query: 148 VDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS----- 202
V ++K SGS D T+++W DG S + +V S
Sbjct: 452 VAFAKKSFSFFVSGSGDRTLKVWS--LDGISEDSEEPINLKTRSVVAAHDKDINSVAVAR 509
Query: 203 --SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLW 259
SLV G D+ A + + +V V+ GH++ + + F VD V TA D +K+W
Sbjct: 510 NDSLVCTGSEDRTASIWRLPDLVH-VVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGG-LLGCGSETNQVFVYDVRWGEPVWVHD 315
++D ++T++GH ++ + S G + CG++ + +++V E + +D
Sbjct: 569 AISDGSCLKTFEGHTSS--VLRASFITDGTQFVSCGAD-GLLKLWNVNTSECIATYD 622
Score = 132 (51.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 50/179 (27%), Positives = 76/179 (42%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG--RRVWSVDYSKGDP 155
AK S + G+ R L DG+ D E+ + + R + + SV ++ D
Sbjct: 455 AKKSFSFFVSGSGDRTLKVWSLDGI--SEDSEEPINLKTRSVVAAHDKDINSVAVARNDS 512
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
++ +GS+D T +W R V V + + VEF ++ A DK
Sbjct: 513 LV-CTGSEDRTASIW--RLPD--LVHVVTLKGHKRRIFSVEFSTVDQCVMTAS-GDKTVK 566
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ + + F+GH +V F+ D V+ G DG LKLWNVN S I TY H
Sbjct: 567 IWAISDG-SCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQH 624
Score = 43 (20.2 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 6/26 (23%), Positives = 17/26 (65%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS 73
+ P D + + G +R+IR++++++
Sbjct: 66 LALSPDDKLLFSAGHSRQIRVWDLET 91
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/160 (25%), Positives = 82/160 (51%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR + SG YD +V +D E + + H R V+S+ + D + SGS D ++++W
Sbjct: 391 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR-VYSLQF---DGIHVVSGSLDTSIRVW 446
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLV 228
D + G C+ T+ + +S +E +++ +G AD +D++ + + +
Sbjct: 447 D--VETGNCIHTL--TGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQG 499
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIR 268
+ H+ VT ++F + + ++T+ DG +KLW++ IR
Sbjct: 500 PNKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLKTGEFIR 538
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 55/241 (22%), Positives = 108/241 (44%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
RV+ SG D + +D+E + H V V Y G V+ SG+ D +++WD
Sbjct: 353 RVV-SGSRDATLRVWDIETGQCLHVLMGHVAA-VRCVQYD-GRRVV--SGAYDFMVKVWD 407
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
P + C+ T+Q +R V ++F G +V+ G D +DV + + + G
Sbjct: 408 PETE--TCLHTLQGHTNR--VYSLQFD--GIHVVS-GSLDTSIRVWDV-ETGNCIHTLTG 459
Query: 232 HRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
H+ + + D + LV+ D +K+W++ + ++T +G +++ V + ++
Sbjct: 460 HQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 518
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR-RVGEDECTLVAGGSD 350
S+ V ++D++ GE ++ + + + GS V WR R + G +
Sbjct: 519 -TSSDDGTVKLWDLKTGE--FIRNLVTLESGGS-----GGVVWRIRASNTKLVCAVGSRN 570
Query: 351 G 351
G
Sbjct: 571 G 571
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 143 (55.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ +KW G +++ + +G ++ YDL + + R + R+V + ++ P
Sbjct: 151 VKDVKWSHGLYDQIIATAVANGRIVVYDLHRTGLEYCRFQGHSRQVHRLAFNPHQPAWLL 210
Query: 160 SGSDDGTMQMWDPRC---DGGK--CVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
SGS D ++MWD R D G C S Q +++ AV V + P G ++ A D A
Sbjct: 211 SGSQDAHIRMWDLRTVPTDRGVSVCGSRDQYNSNSDAVRDVRWSP-GDGVLFAVATDSGA 269
Query: 215 YA-YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
+D+RK P+L H + + + D +V+ GTD +K+W
Sbjct: 270 IQLWDIRKSSSPILRITAHDRPCYSVDWHPDGKHIVSGGTDRQVKVW 316
Score = 37 (18.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 6/11 (54%), Positives = 7/11 (63%)
Query: 302 VYDVRWGEPVW 312
V +VRW P W
Sbjct: 338 VLNVRWRPPSW 348
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 130 (50.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 55/214 (25%), Positives = 99/214 (46%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L +G D + +D+ + + H + ++S+D+++ + ASGS D T+++W
Sbjct: 358 GKYLATGAEDKQIRVWDITTRTIRIQFAGHE-QDIYSLDFARDGRTI-ASGSGDRTVRLW 415
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK--MVDPVLV 228
D V T++ V V P + VAAG DK +D+ + V+ +
Sbjct: 416 DIENGTALTVFTIE-----DGVTTVAISP-DTKYVAAGSLDKSVRVWDLTQGCPVERLEG 469
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW-------NVNDS-----RVIRTYKGHVN 275
DGH+ +V + F + LVT D +KLW N+ + R ++T++GH
Sbjct: 470 PDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGH-- 527
Query: 276 NRNFV-GLSVWRHGGLLGCGSETNQVFVYDVRWG 308
R+FV +++ + GS+ V +D R G
Sbjct: 528 -RDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTG 560
Score = 43 (20.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 50 FDPSDSVFATGGIARKIRIYNI 71
F P ATG ++IR+++I
Sbjct: 354 FSPDGKYLATGAEDKQIRVWDI 375
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 41/160 (25%), Positives = 82/160 (51%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR + SG YD +V +D E + + H R V+S+ + D + SGS D ++++W
Sbjct: 431 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR-VYSLQF---DGIHVVSGSLDTSIRVW 486
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLV 228
D + G C+ T+ + +S +E +++ +G AD +D++ + + +
Sbjct: 487 D--VETGNCIHTL--TGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQG 539
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIR 268
+ H+ VT ++F + + ++T+ DG +KLW++ IR
Sbjct: 540 PNKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLKTGEFIR 578
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 55/241 (22%), Positives = 108/241 (44%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
RV+ SG D + +D+E + H V V Y G V+ SG+ D +++WD
Sbjct: 393 RVV-SGSRDATLRVWDIETGQCLHVLMGHVAA-VRCVQYD-GRRVV--SGAYDFMVKVWD 447
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
P + C+ T+Q +R V ++F G +V+ G D +DV + + + G
Sbjct: 448 PETE--TCLHTLQGHTNR--VYSLQFD--GIHVVS-GSLDTSIRVWDV-ETGNCIHTLTG 499
Query: 232 HRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
H+ + + D + LV+ D +K+W++ + ++T +G +++ V + ++
Sbjct: 500 HQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 558
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR-RVGEDECTLVAGGSD 350
S+ V ++D++ GE ++ + + + GS V WR R + G +
Sbjct: 559 -TSSDDGTVKLWDLKTGE--FIRNLVTLESGGS-----GGVVWRIRASNTKLVCAVGSRN 610
Query: 351 G 351
G
Sbjct: 611 G 611
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 45/180 (25%), Positives = 85/180 (47%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYD-----LEKKVPIFERDE---HGGRRVWSVDY 150
K ++K+ P + + L +G DG + +D L K + D+ H + + +
Sbjct: 227 KPETIKFSPDS--KYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDA-ILCIAF 283
Query: 151 SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA 210
SK L A+GS D +++W + GKC+ +P A + V C++F S+ + +G
Sbjct: 284 SKDGEFL-ATGSLDNKIKVWQIK--SGKCLRKFEP-AHTNGVTCLQFSR-NSTQILSGSF 338
Query: 211 DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRT 269
D + + K + +F GH+ V F D D +++ +DG +K+W+ S ++T
Sbjct: 339 DSSLKIHGL-KSGKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQT 397
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD + G+C+ T+ AV + F + ++ D+ +D+
Sbjct: 277 SGSSDATVRVWD--VETGECIKTLIHHCE--AVLHLRF---ANGIMVTCSKDRSIAVWDM 329
Query: 220 RKMVDPVL--VFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
D + V GHR V + F D +V+A D +K+W+++ +RT GH R
Sbjct: 330 VSPRDITIRRVLVGHRAAVNVVDF-DDRYIVSASGDRTIKVWSMDTLEFVRTLAGH---R 385
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ +R G L+ GS N + ++D+ G
Sbjct: 386 RGIACLQYR-GRLVVSGSSDNTIRLWDIHSG 415
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD + G+C+ T+ AV + F + ++ D+ +D+
Sbjct: 277 SGSSDATVRVWD--VETGECIKTLIHHCE--AVLHLRF---ANGIMVTCSKDRSIAVWDM 329
Query: 220 RKMVDPVL--VFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
D + V GHR V + F D +V+A D +K+W+++ +RT GH R
Sbjct: 330 VSPRDITIRRVLVGHRAAVNVVDF-DDRYIVSASGDRTIKVWSMDTLEFVRTLAGH---R 385
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ +R G L+ GS N + ++D+ G
Sbjct: 386 RGIACLQYR-GRLVVSGSSDNTIRLWDIHSG 415
>UNIPROTKB|Q4V837 [details] [associations]
symbol:dtl-a "Denticleless protein homolog A" species:8355
"Xenopus laevis" [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0019985 "translesion synthesis" evidence=ISS]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006511 GO:GO:0000209 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 EMBL:BC097560
RefSeq:NP_001090030.1 UniGene:Xl.78280 ProteinModelPortal:Q4V837
GeneID:735103 KEGG:xla:735103 CTD:735103 Xenbase:XB-GENE-6254292
HOVERGEN:HBG057737 KO:K11790 Uniprot:Q4V837
Length = 710
Score = 97 (39.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 32/129 (24%), Positives = 56/129 (43%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQP---------SASRSAVCCVEFHPFGSSLVAAGC 209
++G+ DG +++WD R + P S + + P G++L A+ C
Sbjct: 233 SAGAVDGVVKIWDLRKNYSAYRQDPVPVKHFPYPGNSTRKLGYSSLVLDPTGTNLFAS-C 291
Query: 210 ADKKAYAYDVRKM-VDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSR 265
D Y ++ + DPV +F GH+ + YI+ D L++ +D +W V+D
Sbjct: 292 TDDNVYMFNATGLKTDPVSIFRGHQNSTFYIKASVSPDGQFLLSGSSDHSAYIWQVSDPM 351
Query: 266 VIR-TYKGH 273
T GH
Sbjct: 352 AAPVTLMGH 360
Score = 80 (33.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ W PG V SGD + +D+ I E H + SV +SK + + ++G
Sbjct: 104 IAWVPGEHKLVTASGDQTAKL--WDVMAGELIGECRGHQCS-LKSVSFSKFERAVFSTGG 160
Query: 163 DDGTMQMWDPRC 174
DG + MWD RC
Sbjct: 161 RDGNIMMWDTRC 172
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 45/206 (21%), Positives = 86/206 (41%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ W +++ SG +D V +D + + F E ++S +S P A
Sbjct: 111 SVDWSQTRDEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESV---IYSTIWSPHIPGCFA 167
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD + G V V P+ + C ++ + +L+ G D +D+
Sbjct: 168 SASGDQTLRIWDVKTTG---VRIVIPAHQAEILSC-DWCKYNENLLVTGAVDCSLRGWDL 223
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVND-SRVIRTYKGHVNN 276
R + PV GH + ++F L + D ++ WN + ++ T + H
Sbjct: 224 RNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEF 283
Query: 277 RNFVGLSVWRHGGLLGCG-SETNQVF 301
+ LS+ + C ET +++
Sbjct: 284 TCGLDLSLQSPTEVADCSWDETVKIY 309
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/160 (25%), Positives = 81/160 (50%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR + SG YD +V +D E + + H R V+S+ + D + SGS D ++++W
Sbjct: 433 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR-VYSLQF---DGIHVVSGSLDTSIRVW 488
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLV 228
D + G C+ T+ + +S +E +++ +G AD +D++ + + +
Sbjct: 489 D--VETGNCIHTL--TGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQG 541
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIR 268
H+ VT ++F + + ++T+ DG +KLW++ IR
Sbjct: 542 PSKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLKTGEFIR 580
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/160 (25%), Positives = 82/160 (51%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR + SG YD +V +D E + + H R V+S+ + D + SGS D ++++W
Sbjct: 511 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR-VYSLQF---DGIHVVSGSLDTSIRVW 566
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLV 228
D + G C+ T+ + +S +E +++ +G AD +D++ + + +
Sbjct: 567 D--VETGNCIHTL--TGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQG 619
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIR 268
+ H+ VT ++F + + ++T+ DG +KLW++ IR
Sbjct: 620 PNKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLKTGEFIR 658
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 55/241 (22%), Positives = 108/241 (44%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
RV+ SG D + +D+E + H V V Y G V+ SG+ D +++WD
Sbjct: 473 RVV-SGSRDATLRVWDIETGQCLHVLMGHVAA-VRCVQYD-GRRVV--SGAYDFMVKVWD 527
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
P + C+ T+Q +R V ++F G +V+ G D +DV + + + G
Sbjct: 528 PETE--TCLHTLQGHTNR--VYSLQFD--GIHVVS-GSLDTSIRVWDV-ETGNCIHTLTG 579
Query: 232 HRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
H+ + + D + LV+ D +K+W++ + ++T +G +++ V + ++
Sbjct: 580 HQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 638
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR-RVGEDECTLVAGGSD 350
S+ V ++D++ GE ++ + + + GS V WR R + G +
Sbjct: 639 -TSSDDGTVKLWDLKTGE--FIRNLVTLESGGS-----GGVVWRIRASNTKLVCAVGSRN 690
Query: 351 G 351
G
Sbjct: 691 G 691
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/160 (25%), Positives = 82/160 (51%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR + SG YD +V +D E + + H R V+S+ + D + SGS D ++++W
Sbjct: 516 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR-VYSLQF---DGIHVVSGSLDTSIRVW 571
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLV 228
D + G C+ T+ + +S +E +++ +G AD +D++ + + +
Sbjct: 572 D--VETGNCIHTL--TGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQG 624
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIR 268
+ H+ VT ++F + + ++T+ DG +KLW++ IR
Sbjct: 625 PNKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLKTGEFIR 663
Score = 121 (47.7 bits), Expect = 0.00032, P = 0.00032
Identities = 55/241 (22%), Positives = 108/241 (44%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
RV+ SG D + +D+E + H V V Y G V+ SG+ D +++WD
Sbjct: 478 RVV-SGSRDATLRVWDIETGQCLHVLMGHVAA-VRCVQYD-GRRVV--SGAYDFMVKVWD 532
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
P + C+ T+Q +R V ++F G +V+ G D +DV + + + G
Sbjct: 533 PETE--TCLHTLQGHTNR--VYSLQFD--GIHVVS-GSLDTSIRVWDV-ETGNCIHTLTG 584
Query: 232 HRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
H+ + + D + LV+ D +K+W++ + ++T +G +++ V + ++
Sbjct: 585 HQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI 643
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR-RVGEDECTLVAGGSD 350
S+ V ++D++ GE ++ + + + GS V WR R + G +
Sbjct: 644 -TSSDDGTVKLWDLKTGE--FIRNLVTLESGGS-----GGVVWRIRASNTKLVCAVGSRN 695
Query: 351 G 351
G
Sbjct: 696 G 696
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 51/169 (30%), Positives = 76/169 (44%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G +L +G DG+V +DL PI H ++V SVD+S L AS S+D T+
Sbjct: 440 SDGSLLATGSQDGLVRIWDLRSGRPILYFQGHS-KQVISVDWSPNGYQL-ASSSEDNTVV 497
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL------VAAGCADKKAY-AYDVRK 221
+WD R C Q A S V CV+F + + GC + A ++D +
Sbjct: 498 IWDIRKKEQSC----QILAHNSIVSCVKFQKQSTQTNNNNNNSSPGCVNYLATCSFDGKI 553
Query: 222 MV------DPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDS 264
P+ F+GH VT I + L T+ D K+W+ ND+
Sbjct: 554 KTWSPNTWSPLATFEGHSSKVTSIDLTNSKILSTS-FDKTWKIWS-NDN 600
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 118 (46.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 37/131 (28%), Positives = 64/131 (48%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
SV + D +L A+GS D T ++W P C + + S R + CV+F P L
Sbjct: 481 SVAVAPNDKLL-ATGSQDRTAKLWALPHC---QLLGIF--SGHRRGLWCVQFSPMDQVLA 534
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVT--AGTDGCLKLWNVN 262
A AD + ++ + F+GH +V + F+ T L++ +G+DG +KLW +
Sbjct: 535 TAS-ADGTIKLWALQDF-SCLKTFEGHDASVLKVVFVSRGTQLLSRPSGSDGLVKLWTIK 592
Query: 263 DSRVIRTYKGH 273
++ ++T H
Sbjct: 593 NNECVKTLDAH 603
Score = 109 (43.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 160 SGSDDGTMQMWD-PRC--------DGGKCVSTVQPS--ASRSAVCCVEFHPFGSSLVAAG 208
+GS D T+++W P D G + Q + + V P L+A G
Sbjct: 436 TGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRCHDKDINSVAVAP-NDKLLATG 494
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVI 267
D+ A + + + +F GHR+ + ++F +D L TA DG +KLW + D +
Sbjct: 495 SQDRTAKLWALPHC-QLLGIFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCL 553
Query: 268 RTYKGH 273
+T++GH
Sbjct: 554 KTFEGH 559
Score = 58 (25.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNI 71
+ + FDP+ ++ ATGG +R+++I
Sbjct: 109 VATMAFDPTSTLLATGGCDGAVRVWDI 135
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 41/160 (25%), Positives = 81/160 (50%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR + SG YD +V +D E + + H R V+S+ + D + SGS D ++++W
Sbjct: 433 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR-VYSLQF---DGIHVVSGSLDTSIRVW 488
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLV 228
D + G C+ T+ + +S +E +++ +G AD +D++ + + +
Sbjct: 489 D--VETGNCIHTL--TGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQG 541
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIR 268
H+ VT ++F + + ++T+ DG +KLW++ IR
Sbjct: 542 PSKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLKTGEFIR 580
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 55/241 (22%), Positives = 108/241 (44%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
RV+ SG D + +D+E + H V V Y G V+ SG+ D +++WD
Sbjct: 395 RVV-SGSRDATLRVWDIETGQCLHVLMGHVAA-VRCVQYD-GRRVV--SGAYDFMVKVWD 449
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
P + C+ T+Q +R V ++F G +V+ G D +DV + + + G
Sbjct: 450 PETE--TCLHTLQGHTNR--VYSLQFD--GIHVVS-GSLDTSIRVWDV-ETGNCIHTLTG 501
Query: 232 HRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
H+ + + D + LV+ D +K+W++ + ++T +G +++ V + ++
Sbjct: 502 HQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVI 560
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR-RVGEDECTLVAGGSD 350
S+ V ++D++ GE ++ + + + GS V WR R + G +
Sbjct: 561 -TSSDDGTVKLWDLKTGE--FIRNLVTLESGGS-----GGVVWRIRASNTKLVCAVGSRN 612
Query: 351 G 351
G
Sbjct: 613 G 613
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 62/267 (23%), Positives = 111/267 (41%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYS-KG 153
AK+ ++ W G R+L S DG ++ Y K I R V + Y+ G
Sbjct: 56 AKIYAMHW--GYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSW----VMTCAYAPSG 109
Query: 154 DPVLGASGSDDGTMQMWDPRC-DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ V A G D +++ + +G VS P + CC F G + ++G D
Sbjct: 110 NYV--ACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCC-RFLDDGQIITSSG--DT 164
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D+ + F GH V + D+ T V+ D KLW++ D +++
Sbjct: 165 TCALWDI-ETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFT 223
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
GH+++ N V S + G GS+ ++D+R + + ++ + + + F S
Sbjct: 224 GHISDINAV--SFFPSGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFSKS 281
Query: 332 VCWRRVGEDE--CTL---VAGGSDGLL 353
G D+ C++ + GG G+L
Sbjct: 282 GRLLLAGYDDFNCSVWDALKGGRSGVL 308
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 129 (50.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 35/128 (27%), Positives = 61/128 (47%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
SV S D ++ A+GS D ++W C + + + + CV+F P ++A
Sbjct: 495 SVAVSPNDKLI-ATGSQDRLAKLWS--CPDCSLLGVF--TGHKRGIWCVQFSPV-DQILA 548
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSR 265
AD + ++ + F+GH +V I F+ T L++ G+DG LKLW + +
Sbjct: 549 TSSADGTLKLWGLQDF-SCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNE 607
Query: 266 VIRTYKGH 273
++T GH
Sbjct: 608 CVKTLDGH 615
Score = 121 (47.7 bits), Expect = 0.00038, P = 0.00038
Identities = 38/113 (33%), Positives = 53/113 (46%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL-VAAGCADKKAYAY 217
A+G D T+++WD K T S V VEFHP S L + + D K +
Sbjct: 126 ATGGCDSTIKIWDMI----KQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIW 181
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRT 269
D+ V V DGH VT + F D +TL+++G D +WN+ IRT
Sbjct: 182 DLNSS-KCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRT 233
Score = 46 (21.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNI 71
+ + FD + ++ ATGG I+I+++
Sbjct: 113 VATMVFDSTSTLLATGGCDSTIKIWDM 139
>FB|FBgn0001086 [details] [associations]
symbol:fzy "fizzy" species:7227 "Drosophila melanogaster"
[GO:0008054 "cyclin catabolic process" evidence=IMP;IDA]
[GO:0005813 "centrosome" evidence=IDA;TAS] [GO:0005819 "spindle"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA;TAS] [GO:0007096 "regulation
of exit from mitosis" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0030162 "regulation of proteolysis" evidence=TAS]
[GO:0007049 "cell cycle" evidence=IMP] [GO:0009987 "cellular
process" evidence=IMP] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS;IDA] [GO:0005680 "anaphase-promoting complex"
evidence=ISS;IDA] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=IDA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0007147 "female meiosis II" evidence=IMP]
[GO:0007144 "female meiosis I" evidence=IGI] [GO:0051488
"activation of anaphase-promoting complex activity" evidence=ISS]
[GO:0007067 "mitosis" evidence=IMP] [GO:0030718 "germ-line stem
cell maintenance" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005813 GO:GO:0006911
GO:GO:0000776 GO:GO:0007067 EMBL:AE014134 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030162 GO:GO:0008054
GO:GO:0007096 GO:GO:0030718 KO:K03363 OMA:RTPGKSN
GeneTree:ENSGT00580000081599 GO:GO:0007144 GO:GO:0007147
EMBL:U22419 EMBL:BT029432 EMBL:BT056243 RefSeq:NP_477501.1
UniGene:Dm.4066 SMR:Q24044 MINT:MINT-922907 STRING:Q24044
EnsemblMetazoa:FBtr0080833 GeneID:34968 KEGG:dme:Dmel_CG4274
UCSC:CG4274-RA CTD:34968 FlyBase:FBgn0001086 InParanoid:Q24044
OrthoDB:EOG4W3R3B GenomeRNAi:34968 NextBio:791144 Uniprot:Q24044
Length = 526
Score = 129 (50.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 71/267 (26%), Positives = 117/267 (43%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL W G++L G+ G V +D K + D H R V S+ ++ L +SG
Sbjct: 256 SLSWIQ--EGQILAIGNSTGAVELWDCSKVKRLRVMDGHSAR-VGSLAWNS---FLVSSG 309
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-----KAYA 216
S DGT+ D R K +ST+ S VC +++ +A+G D A +
Sbjct: 310 SRDGTIVHHDVRAREHK-LSTL--SGHTQEVCGLKWST-DFKYLASGGNDNLVNVWSAAS 365
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAG--TDGCLKLWNVNDSRVIRTYKG 272
V DP+ F+ H+ V + + TL + G D C+K WNVN+ ++++
Sbjct: 366 GGVGTATDPLHKFNDHQAAVRALAWCPWQPSTLASGGGTADRCIKFWNVNNGTLMKS--- 422
Query: 273 HVNNRNFV-GLSVWRH-GGLLGC-GSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFV 329
V++++ V L RH L+ G NQ+ + W P V + +T G
Sbjct: 423 -VDSKSQVCSLLFSRHYKELISAHGFANNQLTI----WKYPTMVKQAD-LT------GHT 470
Query: 330 SSVCWRRVGEDECTLVAGGSDGLLHVF 356
S V + D T+++ G+D L ++
Sbjct: 471 SRVLQMAMSPDGSTVISAGADETLRLW 497
Score = 41 (19.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 92 YYICTPAKLSS-LKWKPGTSGRVLGSGDY 119
Y I TP S ++ P TS R+L + D+
Sbjct: 179 YSIKTPISTKSGSRYIPTTSERILDAPDF 207
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 40/177 (22%), Positives = 77/177 (43%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ W +++ SG +D V +D + + + F+ E ++S +S P A
Sbjct: 116 SVDWSQTRGEQLVVSGSWDQTVKLWDPTVGRSLCTFKGHES---IIYSTIWSPHIPGCFA 172
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD + G V V P+ + C ++ + +L+ G D +D+
Sbjct: 173 SASGDQTLRIWDVKTTG---VRIVVPAHQAEILSC-DWCKYNENLLVTGAVDCSLRGWDL 228
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLD--VDTLVTAGTDGCLKLWNVNDSR-VIRTYKGH 273
R + PV GH + ++F L + D ++ WN + ++ T + H
Sbjct: 229 RNVRQPVFELLGHTYAIRRVKFSPFYASVLASCSYDFTVRFWNFSKPNPLLETVEHH 285
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 54/180 (30%), Positives = 84/180 (46%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKV--PIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
G+ L +G D + +D+ + IF E ++S+D++ G+ ASGS D T++
Sbjct: 328 GKYLATGAEDKQIRVWDIATRTIKHIFSGHEQD---IYSLDFA-GNGRYIASGSGDKTVR 383
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK--MVDPV 226
+WD GK V T+ + V V P G VAAG DK +D +V+ +
Sbjct: 384 LWD--IAEGKLVYTL---SIEDGVTTVAMSPDGL-YVAAGSLDKTVRVWDTTTGYLVERL 437
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTY----KGHVNNRNFVG 281
DGH+ +V + F + LV+ D +KLW +N R + Y KG +R F G
Sbjct: 438 ENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPR--QQYNSAGKGGKCHRTFEG 495
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 58/206 (28%), Positives = 90/206 (43%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFE--RDEHGGRR-VWSVDYSKGDPVLGASGSDDG 165
+ GR + SG D +D+EK F +E G + V SV S D L A+GS D
Sbjct: 379 SDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSP-DGRLVAAGSLDN 437
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV---RKM 222
+++WD + G + + +V V F P G SL A+G DK +D+ R
Sbjct: 438 IVRLWDAQT--GYFLERYE--GHLDSVYSVAFSPDGKSL-ASGSLDKSLKLWDLSGSRSR 492
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
F+GH+ V + F D L++ D ++ W+ + +GH N+ V
Sbjct: 493 SRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVA 552
Query: 282 LSVWR--HGGLL-GCGSETNQVFVYD 304
LS HG G G ++++ YD
Sbjct: 553 LSPKNNSHGVFATGSGDFRSRLWKYD 578
Score = 125 (49.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 62/239 (25%), Positives = 101/239 (42%)
Query: 127 DLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM--WDPRCDGGKCVSTVQ 184
+L KK P E + RR + S+ +G + GT + ++P + +
Sbjct: 224 NLNKK-PDMEEVKEEDRRRHDTEMSE------ENGKEKGTDWLVGYNPSVQTNLNIDLLH 276
Query: 185 PSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFL 242
S VCCV F G L A GC ++ A YDV K V V + + YIR +
Sbjct: 277 NLQHNSVVCCVNFSNDGKYL-ATGC-NRSAQIYDVDTGKKVH-AFVDESEKDGDLYIRSV 333
Query: 243 ----DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETN 298
D + L T D +K+W+++ ++ T+ GH + L G + GS
Sbjct: 334 CFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGH--ELDIYSLDYSSDGRFIVSGSGDK 391
Query: 299 QVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS-DGLLHVF 356
+ ++D+ G+ + E V G + G V+SV G LVA GS D ++ ++
Sbjct: 392 KAKIWDIEKGKCAFTLGNEEV---GPKNG-VTSVAMSPDGR----LVAAGSLDNIVRLW 442
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 45/179 (25%), Positives = 78/179 (43%)
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
P ++S + + P +G L + +D YDL K + ++ H + V V + D
Sbjct: 296 PQRVSKVAFHP--NGHHLATACFDSTWRMYDLTTKKELLYQEGHS-KSVADVAFHP-DGS 351
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ +G D ++WD R G+C+ + + VE+ P G ++ G +D
Sbjct: 352 VALTGGHDCYGRVWDMRT--GRCIMFLDGHTKE--IHSVEWMPNGYEMIT-GSSDNSMKV 406
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+D+R M H VT +R D LV+A D LK+W+ + +R +GH
Sbjct: 407 WDLR-MRRNTYTMPAHTSVVTRVR-ADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGH 463
Score = 127 (49.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 45/161 (27%), Positives = 74/161 (45%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
S YDG V+ + L ++ PI E ++H +RV V + L A+ D T +M+D
Sbjct: 271 SCSYDGTVLLWSLSQESPIGELEQHP-QRVSKVAFHPNGHHL-ATACFDSTWRMYDLTT- 327
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
K Q S+S V V FHP GS + G D +D+R ++ DGH K
Sbjct: 328 --KKELLYQEGHSKS-VADVAFHPDGSVALTGG-HDCYGRVWDMRTG-RCIMFLDGHTKE 382
Query: 236 VTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ + ++ ++T +D +K+W++ R T H +
Sbjct: 383 IHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTS 423
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 117 (46.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 29/107 (27%), Positives = 57/107 (53%)
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCADKKAYAY 217
+DD + +WD R + +T +PS S A V C+ F+P+ ++A G ADK +
Sbjct: 2 ADDQKLMIWDTRSN-----NTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 56
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
D+R + + F+ H+ + +++ + L ++GTD L +W+++
Sbjct: 57 DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS 103
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS--SLVAAGCADKKAYAY 217
S + D +++WD + G+C+S +R CV+F+P +L AG +DKK +
Sbjct: 214 SAAYDRYLKLWDT--ETGQCISRF---TNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQW 268
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D+R + V +D H V I F+D + V+ D L++W D V Y +
Sbjct: 269 DIRSG-EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW-DIPVDFKYIAEPSM 326
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVY 303
+ +++ +G L C S NQ+ ++
Sbjct: 327 HSMPAVTLSPNGKWLACQSMDNQILIF 353
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 43/161 (26%), Positives = 80/161 (49%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR + SG YD +V +D E + + H R V+S+ + D + SGS D ++++W
Sbjct: 564 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR-VYSLQF---DGIHVVSGSLDTSIRVW 619
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G C+ T+ + +S +E +++ +G AD +D+ K +
Sbjct: 620 D--VETGNCIHTL--TGHQSLTSGMELK---DNILVSGNADSTVKIWDI-KTGQCLQTLQ 671
Query: 231 G---HRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIR 268
G H+ VT ++F + + ++T+ DG +KLW++ IR
Sbjct: 672 GPHKHQSAVTCLQF-NKNFVITSSDDGTVKLWDLRTGEFIR 711
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 56/241 (23%), Positives = 108/241 (44%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
RV+ SG D + +D+E + H V V Y G V+ SG+ D +++WD
Sbjct: 526 RVV-SGSRDATLRVWDIETGQCLHVLMGHVAA-VRCVQYD-GRRVV--SGAYDFMVKVWD 580
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
P + C+ T+Q +R V ++F G +V+ G D +DV + + + G
Sbjct: 581 PETE--TCLHTLQGHTNR--VYSLQFD--GIHVVS-GSLDTSIRVWDV-ETGNCIHTLTG 632
Query: 232 HRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
H+ + + D + LV+ D +K+W++ + ++T +G +++ V + ++
Sbjct: 633 HQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVI 691
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR-RVGEDECTLVAGGSD 350
S+ V ++D+R GE ++ + + + GS V WR R + G +
Sbjct: 692 -TSSDDGTVKLWDLRTGE--FIRNLVTLESGGS-----GGVVWRIRASNTKLVCAVGSRN 743
Query: 351 G 351
G
Sbjct: 744 G 744
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 125 (49.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 84/337 (24%), Positives = 136/337 (40%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSXXXXXXXXXXXXXSKVCDYYICTPAKLSSLKWKP 107
+ + P +VFA+ G + IRI+++ + + ++W P
Sbjct: 20 VAWHPKGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRT----------IREIRWSP 69
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERD---EHGGRRVWSVDYSKGDPVLGASGSDD 164
G+ L S +DG + K FE + E V SV +S+ +L A+ S D
Sbjct: 70 --CGQYLASASFDGTTAIWS--KSSGEFECNATLEGHENEVKSVSWSRSGGLL-ATCSRD 124
Query: 165 GTMQMWDPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRK 221
++ +W+ D +C + + P V V +HP L+A+ D K +A D
Sbjct: 125 KSVWIWEVAGDDEFECAAVLNPHTQD--VKRVVWHPT-KELLASASYDNTIKMFAEDALD 181
Query: 222 MV-DPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNV----NDSRVIRTYKGHV 274
D V H TV I F D + LV+ D LK+W ND+ V K V
Sbjct: 182 SDWDCVATLSSHTSTVWSIDF-DATGERLVSCSDDTSLKIWQAYHPGNDAGVATPDKQTV 240
Query: 275 ----------NNRNFVGLSVWRHGGLLG--CGSETNQVF--VYDVRWGEPVWVHDFEPVT 320
++R +S + L+ CG + ++F D + EP FE +T
Sbjct: 241 WKCVCTISGQHSRAIYDVSWCKLTNLIATACGDDGIRIFKETSDSKRDEPT----FEQLT 296
Query: 321 AA-GSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
A G+ V+SV W V E + L++ DG + V+
Sbjct: 297 AEEGAHDQDVNSVEWNPVVEGQ--LISCSDDGTIKVW 331
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS--SLVAAGCADKKAYAY 217
S + D +++WD + G+C+S +R CV+F+P +L AG +DKK +
Sbjct: 217 SAAYDRYLKLWDT--ETGQCISRF---TNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQW 271
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D+R + V +D H V I F+D + V+ D L++W D V Y +
Sbjct: 272 DIRSG-EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW-DIPVDFKYIAEPSM 329
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVY 303
+ +++ +G L C S NQ+ ++
Sbjct: 330 HSMPAVTLSPNGKWLACQSMDNQILIF 356
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 44/172 (25%), Positives = 79/172 (45%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLE---KKVPIFERDE-HGGRR--VWSVDYSKGDPV 156
L W SG +L + D D V +D+ K+ I + G V V +
Sbjct: 173 LSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 231
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPS----ASRSAVCCVEFHPFGSSLVAAGCADK 212
L S +DD + +WD R + +T +PS A + V C+ F+P+ ++A G ADK
Sbjct: 232 LFGSVADDQKLMIWDTRSN-----TTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADK 286
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
+D+R + + F+ H+ + + + + L ++GTD L +W+++
Sbjct: 287 TVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 338
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 44/172 (25%), Positives = 79/172 (45%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLE---KKVPIFERDE-HGGRR--VWSVDYSKGDPV 156
L W SG +L + D D V +D+ K+ I + G V V +
Sbjct: 173 LSWNSNLSGHLLSASD-DHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHES 231
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPS----ASRSAVCCVEFHPFGSSLVAAGCADK 212
L S +DD + +WD R + +T +PS A + V C+ F+P+ ++A G ADK
Sbjct: 232 LFGSVADDQKLMIWDTRSN-----TTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADK 286
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVN 262
+D+R + + F+ H+ + + + + L ++GTD L +W+++
Sbjct: 287 TVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS 338
WARNING: HSPs involving 221 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.443 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 366 339 0.00094 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 471
No. of states in DFA: 622 (66 KB)
Total size of DFA: 273 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.94u 0.39s 25.33t Elapsed: 00:00:01
Total cpu time: 25.00u 0.39s 25.39t Elapsed: 00:00:01
Start: Tue May 21 02:17:25 2013 End: Tue May 21 02:17:26 2013
WARNINGS ISSUED: 2