BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017773
(366 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225470155|ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 382
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/384 (64%), Positives = 299/384 (77%), Gaps = 23/384 (5%)
Query: 1 MSNFHDH---QQPQAETTN------------ERARCEWDFNLRTTVSSSSSPNAAVSDSI 45
M NF Q P+ E N ERARC+W+FNL T V+SSS+ A +D+I
Sbjct: 1 MKNFSTQFNPQSPEVENPNIQEEKAEQHIEEERARCDWEFNLSTVVTSSST--GASTDTI 58
Query: 46 GVIEFDPSDSVFATGGIARKIRIYNIKSVLV--DHP----VVAVVDHSKVCDYYICTPAK 99
GVIEFDPSD++ ATGGIARKIR+Y++KS+L +H V ++ H+ CDYYI TPAK
Sbjct: 59 GVIEFDPSDNLVATGGIARKIRVYSVKSLLPGENHSHGEHNVKLLQHNNACDYYIWTPAK 118
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
LSSL+WKPG+SGRVLGSGDYDGVV EYDL++K+PIFERDEHGGRR+WSVDYS +P +GA
Sbjct: 119 LSSLRWKPGSSGRVLGSGDYDGVVTEYDLDRKIPIFERDEHGGRRIWSVDYSHWNPFVGA 178
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDDGT+QMWDPRC+G V+ V+PSA AVCCVEF+PFG LVA GCAD++AY YDV
Sbjct: 179 SGSDDGTIQMWDPRCEGTTNVAKVRPSAGGGAVCCVEFNPFGGPLVAVGCADRRAYGYDV 238
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
RKMVDPVL+FDGH+K VTY+RFLD +VT+GTDGCL+LW+++D+R+IR Y GH+N RNF
Sbjct: 239 RKMVDPVLIFDGHQKPVTYVRFLDEHMMVTSGTDGCLRLWSMHDARMIRVYMGHMNTRNF 298
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
VGLSVWR GGLLGCGSE N VFVYD RW EP+WVH+F + G + FVSSVCWR+VG+
Sbjct: 299 VGLSVWRTGGLLGCGSENNHVFVYDKRWSEPIWVHEFGGGSRDGCDPKFVSSVCWRQVGK 358
Query: 340 DECTLVAGGSDGLLHVFVGKKKPL 363
D CTLVAGGSDG L V +GK++
Sbjct: 359 DVCTLVAGGSDGSLQVILGKRRAF 382
>gi|225470157|ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 383
Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/368 (65%), Positives = 294/368 (79%), Gaps = 10/368 (2%)
Query: 3 NFHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGI 62
N + ++ Q ERAR +W+F+ + SSS + A +D+IG+IEFDPSD++ TGGI
Sbjct: 19 NIQEEKREQ-HIEEERARRDWEFS--LSTVVSSSSDGASTDTIGIIEFDPSDNLVVTGGI 75
Query: 63 ARKIRIYNIKSVLVDHP------VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
ARKIR+Y+IKS L D V + H+ CDYY+CTPAKLSSL+WKPG++GRVLGS
Sbjct: 76 ARKIRVYSIKSFLSDENHSHGERKVTWLQHNDACDYYVCTPAKLSSLRWKPGSAGRVLGS 135
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDG 176
GDYDGVV EYDL++K+PIFERDEHGGRR+WSVDYS DP +GASGSDDGTMQMWDPRC+G
Sbjct: 136 GDYDGVVTEYDLDQKIPIFERDEHGGRRIWSVDYSHWDPFVGASGSDDGTMQMWDPRCEG 195
Query: 177 GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV 236
K V+ V+PS SAVCCVEF+PFG L+A GCAD++AY YDVRKMVDPVL+FDGH+KTV
Sbjct: 196 IKNVAKVRPSGGGSAVCCVEFNPFGGPLIAVGCADRRAYGYDVRKMVDPVLIFDGHQKTV 255
Query: 237 TYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
TY+RFLD T+VT+GTDGCL+LW+++D+R+IR Y GH+N R+FVGLSVWR GGLLGCGSE
Sbjct: 256 TYVRFLDQHTMVTSGTDGCLRLWSMHDARMIRVYMGHMNTRSFVGLSVWRTGGLLGCGSE 315
Query: 297 TNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV-GEDECTLVAGGSDGLLHV 355
N VFVYD RWGEP+WVH+F + G + FVSSVCWR+V GED CTLVAGGSDG+L V
Sbjct: 316 NNHVFVYDKRWGEPIWVHEFGVGSRDGRDPNFVSSVCWRQVGGEDGCTLVAGGSDGILEV 375
Query: 356 FVGKKKPL 363
VGKKK
Sbjct: 376 IVGKKKAF 383
>gi|255575819|ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223531761|gb|EEF33581.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 426
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/373 (63%), Positives = 293/373 (78%), Gaps = 16/373 (4%)
Query: 2 SNFHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVS----DSIGVIEFDPSDSVF 57
S +QP+ E ERARCEW F+L+T VSSSSS + D++GVIEFD S+++
Sbjct: 53 SQARQEKQPEEEEEEERARCEWGFSLKTVVSSSSSSTSGGGAVSPDALGVIEFDQSENIV 112
Query: 58 ATGGIARKIRIYNIKSVLVDHPV------VAVVDHSKVCDYYICTPAKLSSLKWKPGTSG 111
ATGGIARKIRIY+IKS+L +A++DH C+++ICTPAKLSSL+WKP + G
Sbjct: 113 ATGGIARKIRIYSIKSLLPQEQQHENGNDIALMDHVNACEFFICTPAKLSSLRWKPCSGG 172
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
RV+GSGDYDGVVMEYD+E ++PIFERDEHGGRR+WSVDYS PV+GASGSDDGTMQMWD
Sbjct: 173 RVIGSGDYDGVVMEYDVETRIPIFERDEHGGRRIWSVDYSHWSPVVGASGSDDGTMQMWD 232
Query: 172 PRCDGGKCVSTVQPSASRS--AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
PR +GG CV+TV+PS + S AVC VEF+PFG S++A GCAD++ Y YDVR + +PV V
Sbjct: 233 PRHEGGGCVATVKPSVTSSCRAVCSVEFNPFGGSIIAVGCADRRVYGYDVRMITNPVFVL 292
Query: 230 DGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
DGH+KTVTY+RF+D TL +AG DGCLKLWN+ DS+++RTYKGH+N+RNFVGLSVWR+GG
Sbjct: 293 DGHKKTVTYVRFMDNGTLASAGIDGCLKLWNLQDSQLLRTYKGHLNSRNFVGLSVWRNGG 352
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
LLGCGSE NQVFVYD RW EP+W + P ++ GFV+SVCW +VGED CTLV GGS
Sbjct: 353 LLGCGSENNQVFVYDKRWSEPIWAYGSGPA----ADHGFVNSVCWSQVGEDRCTLVTGGS 408
Query: 350 DGLLHVFVGKKKP 362
+G+L VF GK+KP
Sbjct: 409 NGVLQVFEGKRKP 421
>gi|449517463|ref|XP_004165765.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
COP1-like [Cucumis sativus]
Length = 384
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/354 (65%), Positives = 281/354 (79%), Gaps = 14/354 (3%)
Query: 20 RCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL---V 76
RCEWDF L + VSS + N A SD++GV+EFDPSDS+ AT GIARKIR Y + ++L +
Sbjct: 30 RCEWDFTLASVVSSPT--NCAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDI 87
Query: 77 DH-PVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF 135
DH + +DH++ D+ ICTPAKLSSL+WKP +GR+LGSGDYDGVVMEYDLE KVPIF
Sbjct: 88 DHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIF 147
Query: 136 ERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCV 195
ERDEHGGRRVWSVDYS +PV+GASGSDDGT+Q+WD RC+ G+CV+ VQPS RSAVCCV
Sbjct: 148 ERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVCCV 207
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGC 255
EF+PFG LVA GCAD+KAY YD RKM +PV+VF+GH KTVTY++F+D T+V+A TDG
Sbjct: 208 EFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGS 267
Query: 256 LKLWNVND---SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
LK+W + +RV+RTY+GHVN R+FVGLSVWR GGL+GCGSE +VFVYD RWGEP+W
Sbjct: 268 LKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIW 327
Query: 313 VHDFE-----PVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKK 361
V +F+ GS G VSSVCWR+VGE ECTLVAGGSDG+L VFVG KK
Sbjct: 328 VKEFDGSGGGVGVGMGSGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKK 381
>gi|449461297|ref|XP_004148378.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 383
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/353 (65%), Positives = 281/353 (79%), Gaps = 13/353 (3%)
Query: 20 RCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL---V 76
RCEWDF L + VSS + N A SD++GV+EFDPSDS+ AT GIARKIR Y + ++L +
Sbjct: 30 RCEWDFTLASVVSSPT--NCAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDI 87
Query: 77 DH-PVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF 135
DH + +DH++ D+ ICTPAKLSSL+WKP +GR+LGSGDYDGVVMEYDLE KVPIF
Sbjct: 88 DHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIF 147
Query: 136 ERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCV 195
ERDEHGGRRVWSVDYS +PV+GASGSDDGT+Q+WD RC+ G+CV+ VQPS RSAVCCV
Sbjct: 148 ERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVCCV 207
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGC 255
EF+PFG LVA GCAD+KAY YD RKM +PV+VF+GH KTVTY++F+D T+V+A TDG
Sbjct: 208 EFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGS 267
Query: 256 LKLWNVND---SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
LK+W + +RV+RTY+GHVN R+FVGLSVWR GGL+GCGSE +VFVYD RWGEP+W
Sbjct: 268 LKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGEPIW 327
Query: 313 VHDFE----PVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKK 361
V +F+ G+ G VSSVCWR+VGE ECTLVAGGSDG+L VFVG KK
Sbjct: 328 VKEFDGGVGVGVGGGAGYGLVSSVCWRQVGEQECTLVAGGSDGVLQVFVGHKK 380
>gi|79518327|ref|NP_568435.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|10176840|dbj|BAB10046.1| unnamed protein product [Arabidopsis thaliana]
gi|332005822|gb|AED93205.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
Length = 368
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 234/371 (63%), Positives = 286/371 (77%), Gaps = 12/371 (3%)
Query: 1 MSNFHDHQQPQAETTNERA-RCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFAT 59
M+ H H+Q Q + + R EWD + + SS +++ SD IG IEFDP+D++ AT
Sbjct: 1 MNTLHPHKQQQEQAQQQEEARYEWDL---SLSTVVSSSSSSASDVIGAIEFDPTDNIVAT 57
Query: 60 GGIARKIRIYNIKSVLVDHPV----VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLG 115
GI+RKIR Y + S+L ++ V V+ VD + C+YYICTPAKLSSL+W+PG+ GRV+G
Sbjct: 58 AGISRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIG 117
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK--GDPVLGASGSDDGTMQMWDPR 173
SGDYDGVVMEYDLEK+ P+FERDEHGGRRVWSVDY++ G +GASGSDDGTMQ+WDPR
Sbjct: 118 SGDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPR 177
Query: 174 CDGGKCVSTVQPSA-SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
C + V V+P+ RSAVCCVEF P G VA GCAD+K Y YD+RK+VDP L GH
Sbjct: 178 CPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGH 237
Query: 233 RKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
KTV+Y+RFLD T+VTAGTDGCLKLW+V D RVIRTY+GHVNNRNFVGLSVWR+G L G
Sbjct: 238 TKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFG 297
Query: 293 CGSETNQVFVYDVRWGEPVWVHDFEPV-TAAGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
CGSE N+VFVYD RWG+PVWV FEPV +GS++ FVSSVCWR+ G D+CTLVAGGSDG
Sbjct: 298 CGSENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDG 357
Query: 352 LLHVFVGKKKP 362
+L V+VGK+KP
Sbjct: 358 VLQVYVGKRKP 368
>gi|297808375|ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317908|gb|EFH48330.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/370 (64%), Positives = 288/370 (77%), Gaps = 13/370 (3%)
Query: 1 MSNFHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATG 60
M+ H H+Q + E A+ EWD +L T VSSSS ++ SD IG IEFDP+D++ AT
Sbjct: 1 MNTLHPHKQ--QQEQEEEAKHEWDLSLSTVVSSSS---SSASDVIGAIEFDPTDNIVATA 55
Query: 61 GIARKIRIYNIKSVLVDHPV----VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
GI+RKIR Y + S+L + V V+ VD + C+YYICTPAKLSSL+W+PG+ RV+GS
Sbjct: 56 GISRKIRFYGLPSLLRTNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGSRVIGS 115
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK-GDP-VLGASGSDDGTMQMWDPRC 174
GDYDGVV EYDLEK+ P+FERDEHGGRRVWSVDY++ GD +GASGSDDGTMQ+WDPRC
Sbjct: 116 GDYDGVVTEYDLEKRTPVFERDEHGGRRVWSVDYTRHGDASAVGASGSDDGTMQVWDPRC 175
Query: 175 DGGKCVSTVQPSA-SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
+ VS V+PS RSAVCCVEF P G VA GCAD+K Y YD+RK+VDP L GH
Sbjct: 176 PPEESVSVVRPSGICRSAVCCVEFDPSGGPTVAVGCADRKGYVYDIRKLVDPALTLQGHT 235
Query: 234 KTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGC 293
KTV+Y+RFLD T+VTAGTDGCLKLW+V D RVIRTY+GHVNNRNFVGLSVWR+G L GC
Sbjct: 236 KTVSYVRFLDGCTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGC 295
Query: 294 GSETNQVFVYDVRWGEPVWVHDFEPV-TAAGSERGFVSSVCWRRVGEDECTLVAGGSDGL 352
GSE N+VFVYD RWG+PVWV FEPV +GS++ FVSSVCWR+ G D+CTLVAGGSDG+
Sbjct: 296 GSENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGV 355
Query: 353 LHVFVGKKKP 362
L V+VGK+KP
Sbjct: 356 LQVYVGKRKP 365
>gi|15242945|ref|NP_200038.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|8885538|dbj|BAA97468.1| unnamed protein product [Arabidopsis thaliana]
gi|27808604|gb|AAO24582.1| At5g52250 [Arabidopsis thaliana]
gi|110736198|dbj|BAF00070.1| hypothetical protein [Arabidopsis thaliana]
gi|332008809|gb|AED96192.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
Length = 385
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/353 (60%), Positives = 256/353 (72%), Gaps = 13/353 (3%)
Query: 10 PQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIY 69
P RC+WD +L VSS+S+ SD+IG IEFDP+ + ATGGIARKIR Y
Sbjct: 43 PTIMNIENIPRCDWDLSLSAVVSSASTG----SDAIGAIEFDPTGEIIATGGIARKIRSY 98
Query: 70 NIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE 129
+ S+L DH + YICTPAKLSSLKW+P SGRV+GSGDYDGVV EYD+E
Sbjct: 99 RLSSLLESRD-----DHVTASESYICTPAKLSSLKWRPDFSGRVIGSGDYDGVVTEYDVE 153
Query: 130 KKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
K+VP+ ERDEHGGRR+WSVDY+ ++GASGSDDGT+QMWDPR +GG TV+P
Sbjct: 154 KQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPR-NGGTLEETVRPGGG 212
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
+A+C VEF PFG S +A GCAD+ AY YD+R++VDP++V DGH KTVTY RF+D T+V
Sbjct: 213 -AAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHTIV 271
Query: 249 TAGTDGCLKLWNV-NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
T TDG LK W++ N RV+RTY+GHVN+RNFVGLSVWRHGGL+ GSE NQVFVYD RW
Sbjct: 272 TGSTDGSLKQWDIDNGRRVVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRW 331
Query: 308 GEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
EPVWV GS+R FVSSVC R+V ED CTLVAGGSDG L +F GK+
Sbjct: 332 EEPVWVCGLGHTNRFGSDRRFVSSVCLRQVDEDWCTLVAGGSDGALEIFSGKQ 384
>gi|21592812|gb|AAM64761.1| contains similarity to photomorphogenesis repressor protein
[Arabidopsis thaliana]
Length = 385
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/353 (60%), Positives = 255/353 (72%), Gaps = 13/353 (3%)
Query: 10 PQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIY 69
P RC+WD +L VSS+S+ SD+IG IEFDP+ + ATGGIARKIR Y
Sbjct: 43 PTIMNIENIPRCDWDLSLSAVVSSASTG----SDAIGAIEFDPTGEIIATGGIARKIRSY 98
Query: 70 NIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE 129
+ S+L DH + ICTPAKLSSLKW+P SGRV+GSGDYDGVV EYD+E
Sbjct: 99 RLSSLLESRD-----DHVTASESCICTPAKLSSLKWRPDFSGRVIGSGDYDGVVTEYDVE 153
Query: 130 KKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
K+VP+ ERDEHGGRR+WSVDY+ +LGASGSDDGT+QMWDPR +GG TV+P
Sbjct: 154 KQVPVSERDEHGGRRIWSVDYTLYNGSLLGASGSDDGTVQMWDPR-NGGTLEETVRPGGG 212
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
+A+C VEF PFG S +A GCAD+ AY YD+R++VDP++V DGH KTVTY RF+D T+V
Sbjct: 213 -AAICSVEFDPFGGSSIAVGCADQNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHTIV 271
Query: 249 TAGTDGCLKLWNV-NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
T TDG LK W++ N RV+RTY+GHVN+RNFVGLSVWRHGGL+ GSE NQVFVYD RW
Sbjct: 272 TGSTDGSLKQWDIDNGRRVVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRW 331
Query: 308 GEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
EPVWV GS+R FVSSVC R+V ED CTLVAGGSDG L +F GK+
Sbjct: 332 EEPVWVCGLGHTNRFGSDRRFVSSVCLRQVDEDWCTLVAGGSDGALEIFSGKQ 384
>gi|297792549|ref|XP_002864159.1| hypothetical protein ARALYDRAFT_495294 [Arabidopsis lyrata subsp.
lyrata]
gi|297309994|gb|EFH40418.1| hypothetical protein ARALYDRAFT_495294 [Arabidopsis lyrata subsp.
lyrata]
Length = 384
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/353 (59%), Positives = 253/353 (71%), Gaps = 13/353 (3%)
Query: 10 PQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIY 69
P RC+WD +L VSS+S+ SD+IG IEFDP+ + ATGGIARKIR Y
Sbjct: 42 PTIMNIENIPRCDWDLSLSAVVSSASTG----SDAIGAIEFDPTGEIIATGGIARKIRSY 97
Query: 70 NIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE 129
+ S+L DH D I TPAKLSSLKW+P SGRV+GSGDYDGVV EYD+E
Sbjct: 98 RLSSLLESRD-----DHVTASDSCIYTPAKLSSLKWRPDLSGRVIGSGDYDGVVTEYDVE 152
Query: 130 KKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
K+VP+ ERDEHGGRR+WSVDY+ ++GASGSDDGT+QMWDPR +GG TV+P
Sbjct: 153 KQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPR-NGGTLEETVRPGGG 211
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
+A+C VEF PFG S +A GCAD+ AY YD+R++VDP++V DGH KTVTY RF+D T+V
Sbjct: 212 -AAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHTIV 270
Query: 249 TAGTDGCLKLWNV-NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
T TDG LK WN+ N RV+RTY+GHVN+RNFVGLSVWRHGGL+ GSE NQVFVYD RW
Sbjct: 271 TGSTDGSLKQWNIDNGRRVVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRW 330
Query: 308 GEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
EPVWV G++R FVSSVC R+V ED CTL AGGSDG L +F GK+
Sbjct: 331 EEPVWVCGLGQPDRFGADRRFVSSVCLRQVDEDWCTLAAGGSDGALEIFSGKR 383
>gi|224134807|ref|XP_002321910.1| predicted protein [Populus trichocarpa]
gi|222868906|gb|EEF06037.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/241 (73%), Positives = 200/241 (82%), Gaps = 4/241 (1%)
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
MEY+LE+++PIFERDEHGGRRVWSVDYS DP +GASGSDDGTMQMWD R + G+CV+TV
Sbjct: 1 MEYNLERRIPIFERDEHGGRRVWSVDYSHCDPTMGASGSDDGTMQMWDTRSESGECVATV 60
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLD 243
QPS RSAVCCVEF+PFG +VA GCAD+K Y YD+R M DPV V DGHRKTVTYI+FLD
Sbjct: 61 QPSVRRSAVCCVEFNPFGGPIVAIGCADRKVYGYDLRMMADPVFVLDGHRKTVTYIKFLD 120
Query: 244 VDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
TLV+A DGCLKLWN ++S VIRTY GHVNNRNFVGLSVWR+GGLLGCGSE N+VFVY
Sbjct: 121 NATLVSASIDGCLKLWNSDNSNVIRTYHGHVNNRNFVGLSVWRNGGLLGCGSENNKVFVY 180
Query: 304 DVRWGEPVWVHDFEPVTAAGSER---GFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
D RW EPVWVH+ G +R GFVSSVCWR+VGED+CTLV GGSDG+L VF GK+
Sbjct: 181 DKRWSEPVWVHE-SSSPIMGKDRCGSGFVSSVCWRQVGEDQCTLVTGGSDGILQVFRGKR 239
Query: 361 K 361
K
Sbjct: 240 K 240
>gi|224122376|ref|XP_002318819.1| predicted protein [Populus trichocarpa]
gi|222859492|gb|EEE97039.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 171/238 (71%), Positives = 199/238 (83%)
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
MEY LE+++PIFERDEHGGRRVWSVDYS DPVLGASGSDDGTMQMWD RC+ G+ V+TV
Sbjct: 1 MEYCLERRIPIFERDEHGGRRVWSVDYSHWDPVLGASGSDDGTMQMWDTRCESGEGVATV 60
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLD 243
QP RSAVCCVEF+PFG +VA GCAD++ Y YD+R DPV V DGHRKTVTYI+FLD
Sbjct: 61 QPGVGRSAVCCVEFNPFGGPIVAVGCADRRVYGYDIRMTGDPVFVLDGHRKTVTYIKFLD 120
Query: 244 VDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
TLV+A DGCLKLW+ ++S VIR+YKGHVN+R+F+GLSVWR+GGLLGCGSE N+VFVY
Sbjct: 121 NVTLVSASIDGCLKLWDSDNSNVIRSYKGHVNSRSFIGLSVWRNGGLLGCGSENNKVFVY 180
Query: 304 DVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKK 361
D RWGEP+WVH+ PV G GFVSSVCWR+V ED+CTLVAGGSDG L VF G++K
Sbjct: 181 DRRWGEPIWVHESNPVGRDGCGGGFVSSVCWRQVEEDQCTLVAGGSDGDLQVFQGRRK 238
>gi|14532634|gb|AAK64045.1| unknown protein [Arabidopsis thaliana]
gi|50253578|gb|AAT71991.1| At5g23730 [Arabidopsis thaliana]
Length = 243
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/243 (69%), Positives = 198/243 (81%), Gaps = 4/243 (1%)
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSK--GDPVLGASGSDDGTMQMWDPRCDGGKCVS 181
MEYDLEK+ P+FERDEHGGRRVWSVDY++ G +GASGSDDGTMQ+WDPRC + V
Sbjct: 1 MEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEESVG 60
Query: 182 TVQPSA-SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIR 240
V+P+ RSAVCCVEF P G VA GCAD+K Y YD+RK+VDP L GH KTV+Y+R
Sbjct: 61 VVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVR 120
Query: 241 FLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
FLD T+VTAGTDGCLKLW+V D RVIRTY+GHVNNRNFVGLSVWR+G L GCGSE N+V
Sbjct: 121 FLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRV 180
Query: 301 FVYDVRWGEPVWVHDFEPV-TAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGK 359
FVYD RWG+PVWV FEPV +GS++ FVSSVCWR+ G D+CTLVAGGSDG+L V+VGK
Sbjct: 181 FVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQVYVGK 240
Query: 360 KKP 362
+KP
Sbjct: 241 RKP 243
>gi|357138463|ref|XP_003570811.1| PREDICTED: protein SPA1-RELATED 3-like [Brachypodium distachyon]
Length = 421
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 217/355 (61%), Gaps = 33/355 (9%)
Query: 21 CEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV 80
CEW+F L TV S + A SD+IG ++FDPS S+ AT GIARK+RIYN ++L+D
Sbjct: 55 CEWEFRLAATVPSPAMVGA--SDAIGSVDFDPSGSLLATAGIARKVRIYNAATLLLDQ-- 110
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKP--GTSGRVLGSGDYDGVVMEYDLEKK-VPIFER 137
S IC PAKLSS++W+P +SGR +G GDYDGVV EYDL++ +ER
Sbjct: 111 -----QSSSPAACICVPAKLSSVRWRPDSSSSGRFVGCGDYDGVVTEYDLDRGGAATWER 165
Query: 138 DEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEF 197
DEH GRRVW++DYS + ASGSDD T +WDPR + + + V CVEF
Sbjct: 166 DEHSGRRVWALDYSPSS-SMAASGSDDRTAHVWDPRSPAAGWAT----AKASGPVLCVEF 220
Query: 198 HPFGSSLVAAGCADKKAYAYDVRKM-VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCL 256
P G+ +A G AD++A YDVR M PV +GH + VTY+R+ D LVT+ DG
Sbjct: 221 DPSGAPRLAVGSADRRAALYDVRNMGRGPVATAEGHARAVTYVRWAPGDRLVTSAADGTH 280
Query: 257 KLWN---------VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
+LW+ V R +R Y GHV+ R+FVG+ +WR GL+ CGSE+N VFVYD+RW
Sbjct: 281 RLWDWAAAGAQGMVGPGREVRAYSGHVSGRSFVGMGLWRGPGLVACGSESNHVFVYDLRW 340
Query: 308 GEPVWVHDFEPVTAAGSERGFVSSVCWRR-----VGEDECTLVAGGSDGLLHVFV 357
+PVWVH F V + GFVS+V WR+ G D LVAGGSDG+L +F
Sbjct: 341 PKPVWVHPFF-VPSGDGGGGFVSAVAWRQQAEDGGGGDAGVLVAGGSDGVLKLFT 394
>gi|326487848|dbj|BAJ89763.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 412
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/357 (45%), Positives = 219/357 (61%), Gaps = 31/357 (8%)
Query: 20 RCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHP 79
RCEW+F L TV S S A S++IG ++FDP+ + ATGGIARK+RIY + L P
Sbjct: 61 RCEWEFRLAATVPSPSL--AGASEAIGSVDFDPAGRLLATGGIARKVRIYGVAG-LPSSP 117
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSG-RVLGSGDYDGVVMEYDLEKKVPIFERD 138
A IC PAKLSS++W+P G R +G GDYDGVV EYD+E+ V +ERD
Sbjct: 118 SPAAC---------ICVPAKLSSVRWRPEEGGGRAVGCGDYDGVVTEYDVERGVAAWERD 168
Query: 139 EHGGRRVWSVDYS-KGDPV-LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVE 196
EH GRRVW++DY+ +G P + ASGSDD T +WDPR G + + + AV CVE
Sbjct: 169 EHAGRRVWALDYAPRGAPTSMAASGSDDRTAHVWDPRAPSGSWAT----ARAGGAVLCVE 224
Query: 197 FHPFGSSLVAAGCADKKAYAYDVRKMV-DPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGC 255
F P G +A G AD++A YDVR + V DGH + VTY+R+ +VT+G DG
Sbjct: 225 FDPSGGPQLAVGSADRRAAVYDVRALGHGAVACMDGHARAVTYVRWAPARRVVTSGADGT 284
Query: 256 LKLWN---------VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+LW +R +R+Y GHV+ R+FVG+ +WR GL+ GSE+N VFVYD+R
Sbjct: 285 HRLWEWPAAPARELSGPAREVRSYSGHVSGRSFVGMGLWRGAGLVASGSESNHVFVYDLR 344
Query: 307 WGEPVWVHDFEPVTAAGSER-GFVSSVCWRRVGED-ECTLVAGGSDGLLHVFVGKKK 361
WG+PVWVH F+ + + S+ GFVS+V W + D LVAG SDG+L +F + +
Sbjct: 345 WGKPVWVHPFDVASDSSSDAGGFVSAVTWLQGDADGGGALVAGRSDGVLKMFTCQPR 401
>gi|41052591|dbj|BAD07933.1| putative COP1 [Oryza sativa Japonica Group]
gi|41052817|dbj|BAD07708.1| putative COP1 [Oryza sativa Japonica Group]
Length = 404
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 166/369 (44%), Positives = 215/369 (58%), Gaps = 39/369 (10%)
Query: 10 PQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIY 69
P E RCEW+F L TV S + A SDSIG ++FDP+ ATGGIARKIRIY
Sbjct: 40 PDDEDKLSPPRCEWEFRLAATVPSPA--LAGASDSIGSLDFDPTGRHLATGGIARKIRIY 97
Query: 70 NIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRV----LGSGDYDGVVME 125
VA C IC PAKLSS++W+PG V +G GDYDGVV E
Sbjct: 98 R----------VAEPSSPAAC---ICVPAKLSSVRWRPGGGEAVAASHVGCGDYDGVVTE 144
Query: 126 YDLEKKVPIFERDEHGGRRVWSVDYSKGD--PVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
YD+E+ VP++ERDEH GRRVW++DY++G + ASGSDD T +WDPR G S
Sbjct: 145 YDVERGVPVWERDEHEGRRVWALDYARGGGAATMVASGSDDRTAHVWDPRAPAGAAGSWA 204
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM-VDPVLVFDGHRKTVTYIRFL 242
A AV CVEF P G +A G AD++A +DVR + V DGH + VTY+R+
Sbjct: 205 TARAG-GAVLCVEFDPAGGPQLAVGSADRRAAVHDVRALGRGAVASMDGHGRAVTYVRWA 263
Query: 243 -DVDTLVTAGTDGCLKLWNVNDS-------RVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
+VT+ DG +LW + R +R+Y GHV+ R+FVG+ VWR GL+ G
Sbjct: 264 ATARRVVTSAADGTHRLWALPAPAAAETAAREVRSYSGHVSGRSFVGMGVWRGAGLIASG 323
Query: 295 SETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDEC--TLVAGGSDGL 352
SE+ VFVYD+RW +P+WVH F A FVS+V WR++ D+ LVAGGSDG+
Sbjct: 324 SESGHVFVYDLRWSKPIWVHPFSHADA------FVSAVAWRQLAGDDSDGQLVAGGSDGV 377
Query: 353 LHVFVGKKK 361
L +F ++
Sbjct: 378 LKLFTTHRR 386
>gi|125537798|gb|EAY84193.1| hypothetical protein OsI_05571 [Oryza sativa Indica Group]
Length = 404
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/369 (44%), Positives = 215/369 (58%), Gaps = 39/369 (10%)
Query: 10 PQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIY 69
P E RCEW+F L TV S + A SDSIG ++FDP+ ATGGIARKIRIY
Sbjct: 40 PDDEDKLSPPRCEWEFRLAATVPSPA--LAGASDSIGSLDFDPTGRHLATGGIARKIRIY 97
Query: 70 NIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRV----LGSGDYDGVVME 125
VA C IC PAKLSS++W+PG V +G GDYDGVV E
Sbjct: 98 R----------VAEPSSPAAC---ICVPAKLSSVRWRPGGGEAVAASHVGCGDYDGVVTE 144
Query: 126 YDLEKKVPIFERDEHGGRRVWSVDYSKGD--PVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
YD+E+ VP++ERDEH GRRVW++DY++G + ASGSDD T +WDPR G S
Sbjct: 145 YDVERGVPVWERDEHEGRRVWALDYARGGGAATMVASGSDDRTAHVWDPRAPAGAAGSWA 204
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM-VDPVLVFDGHRKTVTYIRFL 242
A AV CVEF P G +A G AD++A +DVR + V DGH + VTY+R+
Sbjct: 205 TARAG-GAVLCVEFDPAGGPQLAVGSADRRAAVHDVRALGRGAVASMDGHGRAVTYVRWA 263
Query: 243 DV-DTLVTAGTDGCLKLWNVNDS-------RVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
+VT+ DG +LW + R +R+Y GHV+ R+FVG+ VWR GL+ G
Sbjct: 264 AAARRVVTSAADGTHRLWALPAPAAPETAAREVRSYSGHVSGRSFVGMGVWRGAGLIASG 323
Query: 295 SETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDEC--TLVAGGSDGL 352
SE+ VFVYD+RW +P+WVH F A FVS+V WR++ D+ LVAGGSDG+
Sbjct: 324 SESGHVFVYDLRWSKPIWVHPFSHADA------FVSAVAWRQLAGDDSDGQLVAGGSDGV 377
Query: 353 LHVFVGKKK 361
L +F ++
Sbjct: 378 LKLFTTHRR 386
>gi|413935244|gb|AFW69795.1| hypothetical protein ZEAMMB73_177863 [Zea mays]
Length = 416
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 220/379 (58%), Gaps = 44/379 (11%)
Query: 20 RCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHP 79
RCEWDF L TV +++ P A SD+IG ++ DP+ + ATGGIARKIR+Y++ S+L+ P
Sbjct: 22 RCEWDFRLAATVPTTALPGA--SDAIGSVDLDPTGRLLATGGIARKIRMYDVPSMLLPPP 79
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
A + IC PAKLSS++W+P G +G GDYDGVV EYD E+ V +ERDE
Sbjct: 80 DSAGPAPAPAPAACICVPAKLSSVRWRP-DGGAAVGCGDYDGVVTEYDAERGVASWERDE 138
Query: 140 HGGRRVWSVDYSKGDPVLGA--SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEF 197
HGGRRVWS+DY+ SGSDD T +WDPR + + + +AV CVEF
Sbjct: 139 HGGRRVWSLDYAPPGAPAAMAASGSDDRTAHVWDPRAPSCGWAT----ARAGAAVLCVEF 194
Query: 198 HPFGSSLVAAGCADKKAYAYDVRKM---VDPVLVFDGHRKTVTYIRFL-----DVDTLVT 249
P G+ +A G AD++A+ YDVR + V +GH + VTY+R+ + +VT
Sbjct: 195 DPSGAPHLAVGSADRRAHVYDVRALGRGAVHVARMEGHARAVTYVRWAGPGPAERRRVVT 254
Query: 250 AGTDGCLKLWNVND--------SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVF 301
+ DG +LW +R +R+Y GH + R+FVG+ VWR GL+ GSE+N VF
Sbjct: 255 SAADGTHRLWEWPPGTSEQGAAAREVRSYSGHASARSFVGMGVWRGAGLVASGSESNHVF 314
Query: 302 VYDVRWGEPVWVHDFE---PVTAAGSE------------RGFVSSVCWRRVGE----DEC 342
VYD+RW +P+WV F PVT + GFVS+V WR+ D
Sbjct: 315 VYDLRWAKPIWVQPFASHGPVTIGPEQVDAHAPAAGAGAGGFVSAVAWRQGSHSDDPDGG 374
Query: 343 TLVAGGSDGLLHVFVGKKK 361
LVAGGSDG+L VF +++
Sbjct: 375 ALVAGGSDGVLKVFTCRRR 393
>gi|168007458|ref|XP_001756425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692464|gb|EDQ78821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 329
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 191/338 (56%), Gaps = 30/338 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D IG I F+ + FATGGIARKIR+Y ++ +DH++ C +CTPAKLS
Sbjct: 3 TDIIGTIAFEKTHEYFATGGIARKIRVYAYSPLVSGLTSAIDIDHARCCVQEVCTPAKLS 62
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL+W V+ GDYDGVV E+D+E+ I ERDE+GG+R+WS+DYSK P L AS
Sbjct: 63 SLQWHQERPN-VIACGDYDGVVAEWDVERMCAICERDENGGQRIWSIDYSKDFPDLIASA 121
Query: 162 SDDGTMQMWDPRCDGGKCV---STVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SDDGT++MWD + + ST P +CC EF P SSL+A AD Y YD
Sbjct: 122 SDDGTVRMWDQSSEQSVAIIFHSTFSP------ICCAEFGPASSSLIALASADSNVYLYD 175
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRV------------ 266
R + P+L H++ +Y+RFLD LV++ D +KLW+V
Sbjct: 176 TRWLSTPLLTLAHHKRATSYVRFLDSHRLVSSSIDSSVKLWDVQSMSCSSCRTAPVASQR 235
Query: 267 ----IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA 322
++++ H N RNF GLSV GL+ CGSETNQ FVYD + P+ H F+ A
Sbjct: 236 CNAPVKSFDSHYNVRNFTGLSVRGEDGLIACGSETNQAFVYDSQKCSPILSHSFDYYNPA 295
Query: 323 GSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
VS+VCW R D+CTLVA SDG+L + G +
Sbjct: 296 ---VLIVSAVCW-RAKPDDCTLVAANSDGVLRLLSGNR 329
>gi|168061990|ref|XP_001782967.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665532|gb|EDQ52213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 469
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 216/397 (54%), Gaps = 62/397 (15%)
Query: 17 ERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL- 75
E R WDF + +V S + N +D IG I F+ ++ FATGGIARKIR+Y+ ++
Sbjct: 77 EDHRSSWDFKVVASVKSQNR-NLTSTDVIGTIAFEKTNEYFATGGIARKIRVYSYSQLVS 135
Query: 76 ------------------VDH----------PVVAVVDHSKVCDYYICTPAKLSSLKW-- 105
+D+ + +DH++ C +CTPAKLSSL+W
Sbjct: 136 GVSSTYEDEDEDEDEEESLDYLKQRRLRKRRASTSEIDHARCCVQEVCTPAKLSSLQWYQ 195
Query: 106 -KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+P ++ GDYDGVV E+DLE+ I ERDE+GG+R+WS+DYSK P L AS SDD
Sbjct: 196 ERPN----LIACGDYDGVVAEWDLERNCTISERDENGGQRIWSIDYSKDFPNLIASASDD 251
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
GT+++WD + + + + S +CC EF P SSL+A AD Y YD R +
Sbjct: 252 GTVRIWDRNSEQS---AAILSHPTYSPICCAEFGPVSSSLIALASADSNVYLYDTRWLST 308
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND----------------SRVIR 268
P+L H++ +Y+RFL +LV++ D +KLW++ +++
Sbjct: 309 PLLTLAHHKRAASYVRFLTRHSLVSSSIDSSVKLWDITSLSSTSERAASVIYQHCDTLVK 368
Query: 269 TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVH--DFEPVTAAGSE- 325
++ H N RNF GLSV GGL+ CGSETNQ FVYD + P+ +H D++P ++ +
Sbjct: 369 SFGSHYNVRNFTGLSVRSEGGLIACGSETNQAFVYDSQTSNPILMHSFDYKPTSSNMNPI 428
Query: 326 --RGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
VS+VCWR D CTLVA SDG+L V G +
Sbjct: 429 LGSLIVSAVCWRTKSND-CTLVAANSDGVLRVLSGSQ 464
>gi|302817272|ref|XP_002990312.1| hypothetical protein SELMODRAFT_447996 [Selaginella moellendorffii]
gi|300141874|gb|EFJ08581.1| hypothetical protein SELMODRAFT_447996 [Selaginella moellendorffii]
Length = 436
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 202/389 (51%), Gaps = 62/389 (15%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
W F +R T+ +S +++IG + FD S+ + ATGGIARKIR+Y+I ++L
Sbjct: 54 WAFRVRATIKPFAS---HATETIGSVAFDSSNELMATGGIARKIRVYDISAILDSEEKQQ 110
Query: 83 -------------------------------VVDHSKVCDYYICTPAKLSSLKWKPGTSG 111
D + IC P++LSSL+W+PG +G
Sbjct: 111 QDQAADEDDEDGLEDEDEEGRFVSSRRRARNTFDTDRSSLSVICAPSRLSSLQWRPGKTG 170
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+ GDYDGVV E+ +E+++P+ ERDEHGGR VWSVDY+ G + S SDDGT ++W
Sbjct: 171 -TITCGDYDGVVTEWSVERQIPLVERDEHGGRHVWSVDYATGMSDVCVSASDDGTARVW- 228
Query: 172 PRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
GG S + A S CC EF P S+L+A CAD K Y +D+R+ PV
Sbjct: 229 ---QGGMERSALTIRAPDSKPFCCAEFDPLSSTLLALACADGKVYVHDLRRPECPVWTLA 285
Query: 231 GHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN---DSRVIRTYKGHVNNRNFVGLSVWRH 287
HR+ +Y RFLD + LVTA D + +W++ RV+ ++ H N RNFVGLSVWR
Sbjct: 286 HHRRAASYARFLDRERLVTASVDSTICVWDLAAPPAPRVVESFSQHQNVRNFVGLSVWRK 345
Query: 288 GGLLGCGSETNQVFVYDVRWGEP---------VWVHDF--------EPVTAAGSERGFVS 330
G ++ CGSETNQ +VY V G V H F ++A S
Sbjct: 346 GEMVACGSETNQAYVYQVGSGGGGGGGGDQSFVLRHQFSSSSWSSSTDSSSARRNSSLAS 405
Query: 331 SVCWRRVGEDECTLVAGGSDGLLHVFVGK 359
+VCW + + CTL A S+G+L + G+
Sbjct: 406 AVCW--MEDCSCTLAAANSEGVLQILSGE 432
>gi|302794955|ref|XP_002979241.1| hypothetical protein SELMODRAFT_444188 [Selaginella moellendorffii]
gi|300153009|gb|EFJ19649.1| hypothetical protein SELMODRAFT_444188 [Selaginella moellendorffii]
Length = 432
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 201/385 (52%), Gaps = 58/385 (15%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
W F +R T+ +S +++IG + FD S+ + ATGGIARKIR+Y+I ++L
Sbjct: 54 WAFRVRATIKPFAS---HATETIGSVAFDSSNELMATGGIARKIRVYDISAILDSEDKQQ 110
Query: 83 -------------------------------VVDHSKVCDYYICTPAKLSSLKWKPGTSG 111
D + IC P++LSSL+W+PG +G
Sbjct: 111 QDQAADEDDEDGLEDEDEEGRFVSSRRRARNTFDTDRSSLSVICAPSRLSSLQWRPGKTG 170
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+ GDYDGVV E+ +E+++P+ ERDEHGGR VWSVDY+ + S SDDGT ++W
Sbjct: 171 -TIACGDYDGVVTEWSVERQIPLVERDEHGGRHVWSVDYATDMSGVCVSASDDGTARVW- 228
Query: 172 PRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
GG S + A S CC EF P S+L+A CAD K Y +D+R+ PV
Sbjct: 229 ---QGGMERSALTIRAPDSKPFCCAEFDPLSSTLLALACADGKVYVHDLRRPECPVWTLA 285
Query: 231 GHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN---DSRVIRTYKGHVNNRNFVGLSVWRH 287
HR+ +Y RFLD + LVTA D + +W++ RV+ ++ H N RNFVGLSVWR
Sbjct: 286 HHRRAASYARFLDRERLVTASVDSTICVWDLAAPPAPRVVESFSQHQNVRNFVGLSVWRK 345
Query: 288 GGLLGCGSETNQVFVYDVRWG-----EPVWVHDF--------EPVTAAGSERGFVSSVCW 334
G ++ CGSETNQ +VY V G V H F ++A S+VCW
Sbjct: 346 GEMVACGSETNQAYVYQVGSGGGGDQSFVLRHQFSSSSWSSSTDSSSARRNSSLASAVCW 405
Query: 335 RRVGEDECTLVAGGSDGLLHVFVGK 359
+ + CTL A S+G+L + G+
Sbjct: 406 --MEDCSCTLAAANSEGVLQILSGE 428
>gi|330793214|ref|XP_003284680.1| hypothetical protein DICPUDRAFT_45662 [Dictyostelium purpureum]
gi|325085378|gb|EGC38786.1| hypothetical protein DICPUDRAFT_45662 [Dictyostelium purpureum]
Length = 629
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/321 (37%), Positives = 184/321 (57%), Gaps = 24/321 (7%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
S + IEFD FAT G+ +KI+++ + + V H+ V + IC +K+
Sbjct: 325 TSSIVSSIEFDRDQEFFATAGVTKKIKVFEFSQIRDNVDV-----HTPVREM-ICR-SKI 377
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S L W ++ S DY+G++ +D I +EH +RVWSVD+S+ DP AS
Sbjct: 378 SCLSWNTYIKSQI-ASSDYEGIISLWDSNTGQSIMTFEEHE-KRVWSVDFSRTDPTQLAS 435
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDD +++W D ++T++ S++ +CCV+F+P S+L+A G AD + YD+R
Sbjct: 436 GSDDTKVKLWSTNTDHA--ITTIE---SKANICCVKFNPSSSNLIAFGSADHHIHYYDLR 490
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ DP++VF GHRK V+Y++F++ D L++A TD LKLWNVN + IRT+ GH N +NFV
Sbjct: 491 QYKDPLVVFKGHRKAVSYVKFMNKDELISASTDSTLKLWNVNSNECIRTFTGHSNEKNFV 550
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-----RGFVSSVCWR 335
GL+V +G + CGSE N V+ Y +P+ H F + G E FVSSVCW+
Sbjct: 551 GLTV--NGDYICCGSENNGVYTYYKTLSKPIVTHKFGANSGTGDETDEDGSQFVSSVCWK 608
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
+ D L+A S G + +
Sbjct: 609 K---DSNILLAANSQGNIKIL 626
>gi|66806049|ref|XP_636746.1| hypothetical protein DDB_G0288453 [Dictyostelium discoideum AX4]
gi|60465153|gb|EAL63252.1| hypothetical protein DDB_G0288453 [Dictyostelium discoideum AX4]
Length = 970
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 185/321 (57%), Gaps = 24/321 (7%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
S + IEFD + FAT G+ +KI+I+ + + V HS V + + +K+
Sbjct: 666 TSSIVSSIEFDRDEEYFATAGVTKKIKIFEFSQIRDNVEV-----HSPVKE--MTCRSKI 718
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S L W ++ S DY+G++ +D I +EH +RVWSVD+S+ DP AS
Sbjct: 719 SCLSWNTYIKSQI-ASSDYEGIISLWDANTGQNIMTLEEHE-KRVWSVDFSRTDPTQLAS 776
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDD +++W + + ++T++ S++ +CCV+F+P S+L+A G AD + YD+R
Sbjct: 777 GSDDTRVKLWSTTTE--RAITTIE---SKANICCVKFNPCSSNLIAFGSADHHIHYYDLR 831
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ DP+L+F GHRK V+Y++F++ D +++A TD LKLWNVN + +RT+ GH N +NFV
Sbjct: 832 QYKDPLLIFKGHRKAVSYVKFMNKDEIISASTDSTLKLWNVNQNDCVRTFTGHSNEKNFV 891
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-----RGFVSSVCWR 335
GL+V +G + CGSE N V+ Y +P+ H F + G E FVSSVCW+
Sbjct: 892 GLTV--NGDYICCGSENNGVYTYYKTLSKPIVTHRFGANSGTGEETDDDGSQFVSSVCWK 949
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
+ D L+A S G + +
Sbjct: 950 K---DSNILLAANSQGNIKIL 967
>gi|281205537|gb|EFA79727.1| hypothetical protein PPL_07418 [Polysphondylium pallidum PN500]
Length = 829
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 188/339 (55%), Gaps = 26/339 (7%)
Query: 24 DFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLV-DHPVVA 82
DF + TT+ N S + IEFD D FAT G+ +KI+++ + + DH +
Sbjct: 508 DFRVITTLKYGDLNNT--SSIVSSIEFDKDDEFFATAGVTKKIKVFEYAQLNIRDHVDIH 565
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
V C +K+S L W ++ S DY+G++ +D+ + +EH
Sbjct: 566 VPIKEMTC------RSKISCLSWNTYIKSQI-ASSDYEGIITLWDVNTGQDVMSMEEHE- 617
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+RVWSVD+S+ DP ASGSDD +++W + ++T++ S++ +CCV+F+P S
Sbjct: 618 KRVWSVDFSRTDPTQLASGSDDTRVKLWSTT--SKRAITTIE---SKANICCVKFNPSSS 672
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN 262
L+A G AD + YD+R +P+ +F GHRK V+Y++F++ + +++A TD LKLWNVN
Sbjct: 673 HLIAFGSADHHIHYYDLRHPKEPLSIFKGHRKAVSYVKFMNREEIISASTDSTLKLWNVN 732
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA 322
+ +RTY GH N +NFVGL+V G + CGSE N V+ Y +P+ H F + +
Sbjct: 733 QNECVRTYVGHANEKNFVGLTV--SGDYICCGSENNGVYTYYKTLSKPIVTHRFGANSGS 790
Query: 323 GSE-----RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
G E FVSSVCW++ D L+A S G + V
Sbjct: 791 GEETDDDGSQFVSSVCWKK---DSNILLAANSQGNIKVL 826
>gi|302760721|ref|XP_002963783.1| hypothetical protein SELMODRAFT_141846 [Selaginella moellendorffii]
gi|300169051|gb|EFJ35654.1| hypothetical protein SELMODRAFT_141846 [Selaginella moellendorffii]
Length = 560
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 177/319 (55%), Gaps = 27/319 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY---YICTPA 98
S+ + IEFD D FAT G++R+I+++ AVV+ S Y I + A
Sbjct: 263 SNIVSSIEFDRDDEFFATAGVSRRIKVFEYS---------AVVNSSADVHYPAMEIPSRA 313
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
KLS L W + S DYDG V +D+ I E +EH +R WSVD+++ DP L
Sbjct: 314 KLSCLSWNKCIKHHI-ASSDYDGSVTIWDVNNAQSIMEYEEHA-KRAWSVDFARTDPNLL 371
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SGSDDG +++W R + S+V ++ +CCV+F+P S+ VA G AD + + YD
Sbjct: 372 VSGSDDGKLKVWSTRQE-----SSVMGIDMKANICCVKFNPSSSNFVAVGSADHRIHYYD 426
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+R PV F GH+KTV+Y++F+ + LV+A TD L++WNV + IRT GH+N RN
Sbjct: 427 LRSPASPVHTFSGHQKTVSYVKFITPEELVSASTDSTLRIWNVRTNTPIRTLTGHINERN 486
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
FVGLS + + CGSETN+VFVY P H F + F+S+VCW+
Sbjct: 487 FVGLS--GNSDYVTCGSETNEVFVYHKAISRPATRHRFGSL---DDSLHFISAVCWK--- 538
Query: 339 EDECTLVAGGSDGLLHVFV 357
D TL+A S G + V V
Sbjct: 539 SDSPTLLAANSQGTIKVLV 557
>gi|350537659|ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum]
gi|4090943|gb|AAC98912.1| COP1 homolog [Solanum lycopersicum]
Length = 677
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 186/317 (58%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ SV V+ P A H V + + T +KLS L
Sbjct: 376 VSSIEFDRDDELFATAGVSRRIKVFDFSSV-VNEPADA---HCPVVE--MSTRSKLSCLS 429
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T + S DYDG+V +D+ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 430 WNKYTKNHI-ASSDYDGIVTVWDVTTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 487
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C K ++V ++ +CCV+++P S +A G AD + YD+R
Sbjct: 488 CKVKVW---C--TKQEASVLNIDMKANICCVKYNPGSSVHIAVGSADHHIHYYDLRNTSQ 542
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV +F GHRK V+Y++FL + L +A TD L+LW+V D+ +RT +GH N +NFVGLSV
Sbjct: 543 PVHIFSGHRKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTLRGHTNEKNFVGLSV 602
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSERG--FVSSVCWRRVGED 340
+ L CGSETN+VFVY +PV H F + A + G F+S+VCW+ D
Sbjct: 603 --NNEFLSCGSETNEVFVYHKAISKPVTWHRFGSPDIDEADEDAGSYFISAVCWK---SD 657
Query: 341 ECTLVAGGSDGLLHVFV 357
T++A S G + V V
Sbjct: 658 SPTMLAANSQGTIKVLV 674
>gi|224131692|ref|XP_002321154.1| predicted protein [Populus trichocarpa]
gi|222861927|gb|EEE99469.1| predicted protein [Populus trichocarpa]
Length = 672
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 187/317 (58%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D FAT G++R+I++++ SV V+ P H V + + T +KLS L
Sbjct: 371 VSSIEFDRDDEFFATAGVSRRIKVFDFSSV-VNEPADV---HCPVVE--MSTRSKLSCLS 424
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T ++ S DY+G+V +D+ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 425 WNKFTKNQI-ASSDYEGIVTVWDVTTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 482
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C K ++V ++ +CCV+++P S+ +A G AD + + YD+R + +
Sbjct: 483 CKVKVW---C--TKQEASVLNIDMKANICCVKYNPGSSNYIAVGSADHQIHYYDLRNVTN 537
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GHRKTV+Y++FL L +A TD L+LW+V ++ +RT++GH N +NFVGLSV
Sbjct: 538 PLYVFSGHRKTVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLSV 597
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-EPVTAAGSERG---FVSSVCWRRVGED 340
+ CGSETN+VFVY +PV H F P E F+S+VCW+ D
Sbjct: 598 --SSEYIACGSETNEVFVYHKEISKPVTWHRFGSPEMDDADEDAGSYFISAVCWK---SD 652
Query: 341 ECTLVAGGSDGLLHVFV 357
T+++ S G + V V
Sbjct: 653 SPTMLSANSQGTIKVLV 669
>gi|168054700|ref|XP_001779768.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668853|gb|EDQ55452.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 629
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 182/318 (57%), Gaps = 20/318 (6%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + IEFD D FAT G++R+I+++ +V+ + V H V + I T +KLS
Sbjct: 327 SNIVSSIEFDRDDEFFATAGVSRRIKVFEFATVVNELADV----HCPVVE--ISTRSKLS 380
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL W + S DY+G++ +D+ + E +EH +R WSVD+S+ DP + SG
Sbjct: 381 SLSWNKCIKSHI-ASSDYEGIITVWDINTHQSVMEYEEHE-KRAWSVDFSRTDPTMLVSG 438
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDDG +++W R + S+V ++ +CCV+++P S+ VA G AD + +DVR
Sbjct: 439 SDDGKVKLWCTRQE-----SSVLTMDMKANICCVKYNPSSSNYVAIGSADHHIHYFDVRS 493
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
P+ VF GHRK V+Y++FL + L +A TD L+LW+V + IRT +GH N +NFVG
Sbjct: 494 PQLPLYVFHGHRKAVSYVKFLSSNELASASTDSTLRLWDVKSNCAIRTLRGHTNEKNFVG 553
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE--RGFVSSVCWRRVGE 339
LSV + +GCGS TN+VFVY +P H F + + F+S+VCW+
Sbjct: 554 LSV--NSEYIGCGSVTNEVFVYHKAMSKPTCSHRFGSLDEESDDDTSHFISAVCWK---S 608
Query: 340 DECTLVAGGSDGLLHVFV 357
+ T++A S G + V V
Sbjct: 609 ESPTMLAANSQGTIKVQV 626
>gi|168037507|ref|XP_001771245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677486|gb|EDQ63956.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 184/319 (57%), Gaps = 21/319 (6%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + IEFD D +FAT G++R+I+++ +V+ + V H V + + T +KLS
Sbjct: 367 SNIVSSIEFDRDDQLFATAGVSRRIKVFEFATVVNELADV----HCPVVE--MSTRSKLS 420
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W + + S DY+G++ +D+ I E +EH +R WSVD+S+ DP + SG
Sbjct: 421 CLSWNKYINSHI-ASSDYEGIITVWDVNTHQSIMEYEEHE-KRAWSVDFSRTDPTMLVSG 478
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDDG +++W R + S+V ++ +CCV+++P SS VA G AD + +DVR
Sbjct: 479 SDDGKVKIWCTRQE-----SSVINIDMKANICCVKYNPGSSSYVAVGSADHHIHYFDVRN 533
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
P+ +F+GHRK V+Y++FL L +A TD L+LW+V D+ RT KGH N +NFVG
Sbjct: 534 SHMPLYMFNGHRKAVSYVKFLSPTELASASTDSTLRLWDVKDNCPTRTLKGHTNEKNFVG 593
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE---RGFVSSVCWRRVG 338
L+V + + CGSETN+VFVY +P H F A S+ F+S+VCW+
Sbjct: 594 LTV--NSEYIACGSETNEVFVYHKAMSKPASWHRFGSQDAEESDDDTSHFISAVCWK--- 648
Query: 339 EDECTLVAGGSDGLLHVFV 357
+ T++A S G + V V
Sbjct: 649 SESPTMLAANSQGTIKVLV 667
>gi|328875233|gb|EGG23598.1| hypothetical protein DFA_05732 [Dictyostelium fasciculatum]
Length = 751
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 179/322 (55%), Gaps = 24/322 (7%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
S + IEFD D FAT G+ +KI+++ V + V VC +K+
Sbjct: 445 TSSIVSSIEFDKDDEFFATAGVTKKIKVFEFSQVTMKDVDVHAPVKEMVC------RSKI 498
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S L W ++ S DY+G++ +D+ + +EH +RVWSVD+S+ DP AS
Sbjct: 499 SCLSWNTYFKNQI-ASSDYEGIITLWDVNTGQEMAMMEEHE-KRVWSVDFSRTDPTQFAS 556
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDD +++W K ++T++ S++ +CCV+F+P S L+A G AD + YD+R
Sbjct: 557 GSDDTKVKLWSTT--QKKALTTIE---SKANICCVKFNPSFSHLIAFGSADHHIHYYDLR 611
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR-VIRTYKGHVNNRNF 279
+ V VF GHRK V+Y++F++ D +++A TD LKLWNVN S +RTY GH N +NF
Sbjct: 612 QPTTAVSVFKGHRKAVSYVKFMNKDEIISASTDSTLKLWNVNASESCVRTYSGHSNEKNF 671
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-----RGFVSSVCW 334
VGL+V +G + CGSE N V+ Y +P+ H F + +G E FVSSVCW
Sbjct: 672 VGLAV--NGDYICCGSENNGVYTYYKALSKPIVTHRFGANSGSGEETDEDGTQFVSSVCW 729
Query: 335 RRVGEDECTLVAGGSDGLLHVF 356
++ D L+A S G + V
Sbjct: 730 KK---DSNILLAANSQGNIKVL 748
>gi|356501265|ref|XP_003519446.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Glycine max]
Length = 669
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 185/317 (58%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ S +V+ P A H V + + T +KLS L
Sbjct: 368 VSSIEFDRDDDLFATAGVSRRIKVFDF-SAVVNEPTDA---HCPVVE--MSTRSKLSCLS 421
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W ++ S DY+G+V +D+ + + E +EH +R WSVD+S+ DP + SGSDD
Sbjct: 422 WNKFAKNQI-ASSDYEGIVTVWDVTTRKSLMEYEEHE-KRAWSVDFSRTDPSMLVSGSDD 479
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +CCV+++P + +A G AD + YD+R +
Sbjct: 480 CKVKIW---CTNQE--ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISR 534
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GHRK V+Y++FL D L +A TD L+LW+V ++ +RT+KGH N +NFVGL+V
Sbjct: 535 PVHVFSGHRKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFKGHANEKNFVGLTV 594
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSERG--FVSSVCWRRVGED 340
+ CGSETN+VFVY P+ H F + A E G F+S+VCW+ D
Sbjct: 595 --SSEYIACGSETNEVFVYHKEISRPLTSHRFGSPDMDDAEDEAGSYFISAVCWK---SD 649
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 650 RPTILTANSQGTIKVLV 666
>gi|224118164|ref|XP_002331573.1| predicted protein [Populus trichocarpa]
gi|222873797|gb|EEF10928.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/316 (37%), Positives = 181/316 (57%), Gaps = 21/316 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I+I+ SV+ + V H V + + T +KLS L
Sbjct: 302 VSSIEFDRDDELFATAGVSRRIKIFEFSSVMNEPADV----HCPVVE--MSTRSKLSCLS 355
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T + S DY+G+V +D+ + I E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 356 WNKYTKNHI-ASSDYEGIVTVWDVTTRQSIMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 413
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +C V+++P S VA G AD + YD+R +
Sbjct: 414 CKVKIW---CTQQE--ASVLNIDMKANICSVKYNPGSSIHVAVGSADHHIHYYDLRNISQ 468
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GHRK V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NFVGL+V
Sbjct: 469 PLYVFSGHRKAVSYVKFLSSNELASASTDSTLRLWDVKDNLALRTFRGHTNEKNFVGLTV 528
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG---FVSSVCWRRVGEDE 341
+ + CGSETN+VFVY +P H F G + F+S+VCW+ D
Sbjct: 529 --NSEYIACGSETNEVFVYHKAISKPAAWHRFSTDLENGEDDAGSYFISAVCWK---SDS 583
Query: 342 CTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 584 PTMLTANSQGTIKVLV 599
>gi|356554527|ref|XP_003545597.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Glycine max]
Length = 675
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 185/317 (58%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ S +V+ P A H V + + T +KLS L
Sbjct: 374 VSSIEFDCDDDLFATAGVSRRIKVFDF-SAVVNEPTDA---HCPVVE--MSTRSKLSCLS 427
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W ++ S DY+G+V +D+ + + E +EH +R WSVD+S+ DP + SGSDD
Sbjct: 428 WNKYAKNQI-ASSDYEGIVTVWDVTTRKSLMEYEEHE-KRAWSVDFSRTDPSMLVSGSDD 485
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +CCV+++P + +A G AD + YD+R +
Sbjct: 486 CKVKIW---CTNQE--ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISR 540
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GHRK V+Y++FL D L +A TD L+LW+V ++ +RT+KGH N +NFVGL+V
Sbjct: 541 PVHVFSGHRKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFKGHANEKNFVGLTV 600
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSERG--FVSSVCWRRVGED 340
+ CGSETN+VFVY P+ H F + A E G F+S+VCW+ D
Sbjct: 601 --SSEYIACGSETNEVFVYHKEISRPLTCHRFGSPDMDDAEDEAGSYFISAVCWK---SD 655
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 656 RPTILTANSQGTIKVLV 672
>gi|11127996|gb|AAG31173.1| COP1 [Ipomoea nil]
Length = 677
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 180/317 (56%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ SV V+ P A H V + + T +KLS L
Sbjct: 376 VSSIEFDRDDELFATAGVSRRIKVFDFSSV-VNEPADA---HCPVVE--MSTRSKLSCLS 429
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T + S DYDG+V +D+ + + E +EH +R WSVD+S+ DP + SGSDD
Sbjct: 430 WNKYTKNHI-ASSDYDGIVTVWDVTTRQSVMEYEEHE-KRAWSVDFSRTDPSMLVSGSDD 487
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W + + + ++ +CCV+++P S VA G AD + YD+R
Sbjct: 488 CKVKVWCTKQEASALNIDM-----KANICCVKYNPGSSFHVAVGSADHHIHYYDLRNTSA 542
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ +F GH+K V+Y++FL L +A TD L+LW+V D+ +R ++GH N +NFVGLSV
Sbjct: 543 PLHIFSGHKKAVSYVKFLSSHELASASTDSTLRLWDVKDNSPVRVFRGHTNEKNFVGLSV 602
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-EPVTAAGSE---RGFVSSVCWRRVGED 340
+ CGSETN+VFVY +PV H F P E F+S+VCW+ D
Sbjct: 603 --SNEFISCGSETNEVFVYHKAISKPVTWHRFGSPDVDEADEDVTSFFISAVCWK---SD 657
Query: 341 ECTLVAGGSDGLLHVFV 357
T++A S G + V V
Sbjct: 658 SPTMLAANSQGTIKVLV 674
>gi|168002467|ref|XP_001753935.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694911|gb|EDQ81257.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 702
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 181/321 (56%), Gaps = 23/321 (7%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + IEFD D FATGG++R+I+++ +V+ + V H V + + T +KLS
Sbjct: 397 SNIVSSIEFDRDDEFFATGGVSRRIKVFEFATVVNELADV----HCPVVE--MSTRSKLS 450
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVP----IFERDEHGGRRVWSVDYSKGDPVL 157
L W + S DY+G++ +D+ K I E +EH +R WSVD+S+ DP +
Sbjct: 451 CLSWNKYIKSHI-ASSDYEGIITVWDINKHQAMLQSIMEYEEHE-KRAWSVDFSRTDPTM 508
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
SGSDDG +W R + S+V ++ +CCV+++P + VA G AD + +
Sbjct: 509 LVSGSDDGKASLWCTRQE-----SSVLNIDMKANICCVKYNPGSCNYVAVGSADHHIHYF 563
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
DVR P+ VF+GHRK V+Y++FL D L +A TD L+LW+V ++ IRT KGH N +
Sbjct: 564 DVRNSQMPLYVFNGHRKAVSYVKFLSSDELASASTDSTLRLWDVKENHAIRTLKGHANEK 623
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG-FVSSVCWRR 336
NFVGL+V + + CGSE+N+VFVY +P H F + F+S+VCW+
Sbjct: 624 NFVGLTV--NSEYIACGSESNEVFVYHKAMSKPATWHRFGSQDEESDDTSHFISAVCWK- 680
Query: 337 VGEDECTLVAGGSDGLLHVFV 357
+ T++A S G + V V
Sbjct: 681 --SESPTMLAANSQGTIKVLV 699
>gi|168028370|ref|XP_001766701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682133|gb|EDQ68554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 185/319 (57%), Gaps = 21/319 (6%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + IEF D +FAT G++R+I+I+ +V+ + V H V + + T +KLS
Sbjct: 397 SNIVSSIEFGRDDELFATAGVSRRIKIFEFATVVNEFAGV----HCPVVE--MSTRSKLS 450
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W + S DY+G++ +D+ ++ I E +EH +R WSVD+S+ DP + SG
Sbjct: 451 CLSWNKYIKSHI-ASSDYEGIITVWDVNRRQSITEYEEHE-KRAWSVDFSRTDPTMLVSG 508
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDDG +++W R + S+V ++ +CCV+++P S+ VA G AD + +DVR
Sbjct: 509 SDDGKVKIWCTRQE-----SSVINIDMKANICCVKYNPGSSNYVAVGSADHHIHYFDVRN 563
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
P+ VF+GHRK V+Y++FL + L +A TD L LW+V ++ IRT KGH N +NFVG
Sbjct: 564 SHLPLYVFNGHRKAVSYVKFLSPNELASASTDSTLCLWDVKENCPIRTLKGHTNEKNFVG 623
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE---RGFVSSVCWRRVG 338
L+V + + CGSETN+VFVY +P H F A S+ F+S+VCW+
Sbjct: 624 LTV--NSEYIACGSETNEVFVYHKAMSKPASWHRFGSEDAGESDDDTSHFISAVCWK--- 678
Query: 339 EDECTLVAGGSDGLLHVFV 357
+ T++A S G + V V
Sbjct: 679 SESPTMLAANSQGTIKVLV 697
>gi|332656170|gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa subsp. rapa]
Length = 677
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 182/322 (56%), Gaps = 32/322 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICTPAK 99
+ IEFD D +FAT G++R I++++ SV+ + P+V + T +K
Sbjct: 376 VSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADIQCPIVE-----------MSTRSK 424
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
LS L W + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P +
Sbjct: 425 LSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEHE-KRAWSVDFSRTEPSMLV 482
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W R + +V ++ +CCV+++P S+ +A G AD + YD+
Sbjct: 483 SGSDDCKVKVWCTRQEA-----SVLNIDMKANICCVKYNPGSSNFIAVGSADHHIHYYDL 537
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R + P+ VF GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NF
Sbjct: 538 RNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNF 597
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWR 335
VGL+V + L CGSETN+V+VY +PV H F + +E F+S+VCW+
Sbjct: 598 VGLTV--NSEYLACGSETNEVYVYHKEITKPVTSHRFGSLDMEEAEEEAGSYFISAVCWK 655
Query: 336 RVGEDECTLVAGGSDGLLHVFV 357
D T++ S G + V V
Sbjct: 656 ---SDSPTMLTANSQGTIKVLV 674
>gi|302774074|ref|XP_002970454.1| hypothetical protein SELMODRAFT_171333 [Selaginella moellendorffii]
gi|300161970|gb|EFJ28584.1| hypothetical protein SELMODRAFT_171333 [Selaginella moellendorffii]
Length = 646
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 182/322 (56%), Gaps = 27/322 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + IEFD D +FAT G++R+I+I+ +V+ + V H V + + T +KLS
Sbjct: 343 SNIVSSIEFDRDDELFATAGVSRRIKIFEFATVVNELADV----HCPVAE--MSTRSKLS 396
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W G++ S DY+G V +D+ + E +EH RR WSVD+S+ DP + SG
Sbjct: 397 CLSWNKYIKGQI-ASSDYEGTVTVWDVNSCQSVMEYEEHE-RRAWSVDFSRTDPTMLVSG 454
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDDG +++W R + ++V ++ +CCV+++P S+ VA G AD + YD+R
Sbjct: 455 SDDGKVKLWCTRQE-----TSVLNIDMKANICCVKYNPGSSNFVAVGSADHHIHYYDLRN 509
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
P+ VF GHRK V+Y++F+ + L +A TD L+LW+V S IR+ GH N +NFVG
Sbjct: 510 SKSPLHVFSGHRKAVSYVKFVSPNELASASTDSTLRLWDVQKSSQIRSLTGHANEKNFVG 569
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG------FVSSVCWR 335
L+V + + CGSETN+V VY +P H F T SE F+S+VCW+
Sbjct: 570 LTV--NSEYIACGSETNEVVVYHKEVPKPAARHRF---TNHDSEESDDDVFHFISAVCWK 624
Query: 336 RVGEDECTLVAGGSDGLLHVFV 357
D T++A S G + V V
Sbjct: 625 ---SDSPTMLAANSQGTIKVLV 643
>gi|255587080|ref|XP_002534127.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223525812|gb|EEF28255.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 677
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 183/317 (57%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ +VL D V H V + + T +KLS L
Sbjct: 376 VSSIEFDRDDELFATAGVSRRIKVFDFSTVLNDPADV----HCPVEE--MSTRSKLSCLS 429
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W ++ S DY+G+V +D+ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 430 WNKYAKNQI-ASSDYEGIVTVWDVTTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 487
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +CCV+++P S+ +A G AD + YD+R +
Sbjct: 488 CKVKVW---CTNQE--ASVLNIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNVSH 542
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GHRK V+Y++FL L +A TD L+LW+V ++ +RT++GH N +NFVGLSV
Sbjct: 543 PLHVFSGHRKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLSV 602
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-EPVTAAGSERG---FVSSVCWRRVGED 340
R + CGSETN+V+VY PV H F P E F+S+VCW+ D
Sbjct: 603 NR--DYIACGSETNEVYVYHKEISRPVTWHRFGSPEMDDADEDAGSYFISAVCWK---SD 657
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 658 SPTMLTANSQGTIKVLV 674
>gi|313667084|gb|ADR72985.1| COP1 protein [Brassica rapa var. purpuraria]
gi|338224822|gb|AEI89703.1| COP1 protein [Brassica rapa subsp. chinensis]
Length = 676
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 183/322 (56%), Gaps = 32/322 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICTPAK 99
+ IEFD D +FAT G++R I++++ SV+ + P+V + T +K
Sbjct: 375 VSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADIQCPIVE-----------MSTRSK 423
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
LS L W + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P +
Sbjct: 424 LSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEHE-KRAWSVDFSRTEPSMLV 481
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W C K ++V ++ +CCV+++P S+ +A G AD + YD+
Sbjct: 482 SGSDDCKVKVW---C--TKQEASVLNIDMKANICCVKYNPGSSNFIAVGSADHHIHYYDL 536
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R + P+ VF GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NF
Sbjct: 537 RNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNF 596
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWR 335
VGL+V + L CGSETN+V+VY +PV H F + +E F+S+VCW+
Sbjct: 597 VGLTV--NSEYLACGSETNEVYVYHKEITKPVTSHRFGSLDMEEAEEEAGSYFISAVCWK 654
Query: 336 RVGEDECTLVAGGSDGLLHVFV 357
D T++ S G + V V
Sbjct: 655 ---SDSPTMLTANSQGTIKVLV 673
>gi|302633366|gb|ADL59932.1| constitutively photomorphogenic 1 [Brassica napus]
Length = 677
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 182/322 (56%), Gaps = 32/322 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICTPAK 99
+ IEFD D +FAT G++R I++++ SV+ + P+V + T +K
Sbjct: 376 VSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADIQCPIVE-----------MSTRSK 424
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
LS L W + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P +
Sbjct: 425 LSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEHE-KRAWSVDFSRTEPSMLV 482
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W R + +V ++ +CCV+++P S+ +A G AD + YD+
Sbjct: 483 SGSDDCKVKVWCTRQEA-----SVLNIDMKANICCVKYNPGSSNFIAVGSADHHIHYYDL 537
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R + P+ VF GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NF
Sbjct: 538 RNISQPLHVFSGHKKAVSYVKFLSNNELESASTDSTLRLWDVKDNLPVRTFRGHTNEKNF 597
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWR 335
VGL+V + L CGSETN+V+VY +PV H F + +E F+S+VCW+
Sbjct: 598 VGLTV--NSEYLACGSETNEVYVYHKEITKPVTSHRFGALDMEEAEEEAGSYFISAVCWK 655
Query: 336 RVGEDECTLVAGGSDGLLHVFV 357
D T++ S G + V V
Sbjct: 656 ---SDSPTMLTANSQGTIKVLV 674
>gi|168013805|ref|XP_001759457.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689387|gb|EDQ75759.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 668
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 187/326 (57%), Gaps = 28/326 (8%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYIC 95
P S+ + I+FD D +FAT G+ R+I+I+N +V+ D VVD H V + I
Sbjct: 361 PFQPSSNIVSSIDFDGDDQLFATAGVTRRIKIFNFATVIDD-----VVDVHCPVTE--IP 413
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W ++ S DY+G++ +D+ + + E +EH +R WSVD+S DP
Sbjct: 414 TRSKLSCLSWN-KLKKPLVASSDYEGIIAVWDVNRSQSVVEYEEHE-KRAWSVDFSCIDP 471
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS---RSAVCCVEFHPFGSSLVAAGCADK 212
+ SGSDDG +++W C++ + S ++ +CCV+++P S+ +A G +D
Sbjct: 472 SMMVSGSDDGKVKVW--------CINQDASAFSIDMKANICCVKYNPGSSNHIAIGSSDH 523
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+ YD+R + P+ VF GHRK V+Y++F+ + LV+A TD L+LW+V ++T G
Sbjct: 524 HIHYYDLRNLRTPLFVFKGHRKAVSYVKFMSSNELVSASTDSTLRLWDVQTDTSVQTLGG 583
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA--GSERGFVS 330
H N +NFVGL+V + + CGSET++VFVY +P + H F A G + FVS
Sbjct: 584 HTNEKNFVGLTV--NSDYIACGSETSEVFVYHKATSKPSFSHKFRSSYAEDIGDDISFVS 641
Query: 331 SVCWRRVGEDECTLVAGGSDGLLHVF 356
+VCW+ + T++A S G + V
Sbjct: 642 AVCWK---SESPTMLAANSQGTIKVL 664
>gi|7688063|emb|CAB89693.1| constitutively photomorphogenic 1 protein [Pisum sativum]
Length = 675
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 184/317 (58%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ S +V+ P A H V + + T +KLS L
Sbjct: 374 VSSIEFDRDDDLFATAGVSRRIKVFDF-SAVVNEPTDA---HCPVVE--MTTRSKLSCLS 427
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W ++ S DY+G+V +D+ + + E +EH +R WSVD+S+ DP + SGSDD
Sbjct: 428 WNKYAKNQI-ASSDYEGIVTVWDVTTRKSLMEYEEHE-KRAWSVDFSRTDPSMLVSGSDD 485
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +CCV+++P + +A G AD + YD+R +
Sbjct: 486 CKVKVW---CTNQE--ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISR 540
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL D L +A TD L+LW+V + +RT++GH N +NFVGL+V
Sbjct: 541 PVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQNLPVRTFRGHANEKNFVGLTV 600
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ CGSETN+VFVY +P+ H F + +E F+S+VCW+ D
Sbjct: 601 --SSEYIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGSYFISAVCWK---SD 655
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 656 RPTILTANSQGTIKVLV 672
>gi|357493175|ref|XP_003616876.1| E3 ubiquitin-protein ligase COP1 [Medicago truncatula]
gi|355518211|gb|AES99834.1| E3 ubiquitin-protein ligase COP1 [Medicago truncatula]
Length = 761
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 185/317 (58%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ S +V+ P A H V + + T +KLS L
Sbjct: 460 VSSIEFDRDDDLFATAGVSRRIKVFDF-SAVVNEPTDA---HCPVVE--MTTRSKLSCLS 513
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W ++ S DY+G+V +D+ + + E +EH +R WSVD+S+ DP + SGSDD
Sbjct: 514 WNKYAKNQI-ASSDYEGIVTVWDVTTRKSLMEYEEHE-KRAWSVDFSRTDPSMLVSGSDD 571
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +CCV+++P + +A G AD + YD+R +
Sbjct: 572 CKVKVW---CTNQE--ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISR 626
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL D L +A TD L+LW+V + +RT++GH N +NFVGL+V
Sbjct: 627 PVHVFSGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQNVPVRTFRGHANEKNFVGLTV 686
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP--VTAAGSERG--FVSSVCWRRVGED 340
+ CGSETN+VFVY +P+ H F + A E G F+S+VCW+ D
Sbjct: 687 --SSEYIACGSETNEVFVYHKEISKPLTWHRFSSPDMDDAEDEAGSYFISAVCWK---SD 741
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 742 RPTILTANSQGTIKVLV 758
>gi|297823085|ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata]
gi|297325264|gb|EFH55684.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata]
Length = 675
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 182/320 (56%), Gaps = 28/320 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV---VAVVDHSKVCDYYICTPAKLS 101
+ IEFD D +FAT G++R I++++ SV V+ P +V+ S T +KLS
Sbjct: 374 VSSIEFDRDDELFATAGVSRCIKVFDFSSV-VNEPADMQCPIVEMS--------TRSKLS 424
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P + SG
Sbjct: 425 CLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEHE-KRAWSVDFSRTEPSMLVSG 482
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD +++W R + +V ++ +CCV+++P S+ VA G AD + YD+R
Sbjct: 483 SDDCKVKVWCTRQEA-----SVLNIDMKANICCVKYNPGSSNYVAVGSADHHIHYYDLRN 537
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ P+ VF GH+K V+Y++FL + L +A TD L+LW+V D +RT++GH N +NFVG
Sbjct: 538 ISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDHLPVRTFRGHTNEKNFVG 597
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSERG--FVSSVCWRRV 337
L+V + L CGSETN+V+VY PV H F + A E G F+S+VCW+
Sbjct: 598 LTV--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSFFISAVCWK-- 653
Query: 338 GEDECTLVAGGSDGLLHVFV 357
D T++ S G + V V
Sbjct: 654 -SDSPTMLTANSQGTIKVLV 672
>gi|15225760|ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3 ubiquitin-protein ligase COP1; AltName:
Full=Constitutive photomorphogenesis protein 1
gi|2702280|gb|AAB91983.1| COP1 regulatory protein [Arabidopsis thaliana]
gi|95147316|gb|ABF57293.1| At2g32950 [Arabidopsis thaliana]
gi|330253672|gb|AEC08766.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
Length = 675
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 183/320 (57%), Gaps = 28/320 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV---VAVVDHSKVCDYYICTPAKLS 101
+ IEFD D +FAT G++R I++++ SV V+ P +V+ S T +KLS
Sbjct: 374 VSSIEFDRDDELFATAGVSRCIKVFDFSSV-VNEPADMQCPIVEMS--------TRSKLS 424
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P + SG
Sbjct: 425 CLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEHE-KRAWSVDFSRTEPSMLVSG 482
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD +++W R + +V ++ +CCV+++P S+ +A G AD + YD+R
Sbjct: 483 SDDCKVKVWCTRQEA-----SVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRN 537
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ P+ VF GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NFVG
Sbjct: 538 ISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVG 597
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSERG--FVSSVCWRRV 337
L+V + L CGSETN+V+VY PV H F + A E G F+S+VCW+
Sbjct: 598 LTV--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWK-- 653
Query: 338 GEDECTLVAGGSDGLLHVFV 357
D T++ S G + V V
Sbjct: 654 -SDSPTMLTANSQGTIKVLV 672
>gi|8574407|emb|CAB94800.1| COP1 regulatory protein [Pisum sativum]
Length = 970
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 183/317 (57%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ S +V+ P A H V + + T +KLS L
Sbjct: 669 VSSIEFDRDDDLFATAGVSRRIKVFDF-SAVVNEPTDA---HCPVVE--MTTRSKLSCLS 722
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W ++ S DY+G+V + + + + E +EH +R WSVD+S+ DP + SGSDD
Sbjct: 723 WNKYAKNQI-ASSDYEGIVTVWTMTTRKSLMEYEEHE-KRAWSVDFSRTDPSMLVSGSDD 780
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +CCV+++P + +A G AD + YD+R +
Sbjct: 781 CKVKVW---CTNQE--ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISR 835
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL D L +A TD L+LW+V + +RT++GH N +NFVGL+V
Sbjct: 836 PVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQNLPVRTFRGHANEKNFVGLTV 895
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ CGSETN+VFVY +P+ H F + +E F+S+VCW+ D
Sbjct: 896 --RSEYIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGSYFISAVCWK---SD 950
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 951 RPTILTANSQGTIKVLV 967
>gi|168044506|ref|XP_001774722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674022|gb|EDQ60537.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 182/319 (57%), Gaps = 21/319 (6%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + IEFD D FAT G++R+I+I++ +V+ + V H V + I T +K+S
Sbjct: 347 SNIVSSIEFDRDDEFFATAGVSRRIKIFDFATVINELTDV----HCPVVE--IPTRSKMS 400
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W ++ S DY+G+V +D+ + + E +EH +R WS+D+S+ DP + SG
Sbjct: 401 CLSWNKCLKP-LIASSDYEGIVTVWDVNTRQSVMEYEEHE-KRAWSIDFSRTDPSMLVSG 458
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDDG M++W R + S+ ++ +CCV+++P S+ +A G AD + + +D+R
Sbjct: 459 SDDGKMKVWCTRQE-----SSALSLDMKANICCVKYNPGSSNHIAVGSADHQIHYFDLRN 513
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ P+ VF GHRK V+Y++F+ L +A TD L+LW+V IRT +GH N +NFVG
Sbjct: 514 VRKPLNVFKGHRKAVSYVKFISPTELASASTDSTLRLWDVQRDSSIRTLRGHTNEKNFVG 573
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE---RGFVSSVCWRRVG 338
L+V + + CGSE+N+V VY P H F GS+ F+S+VCW+ G
Sbjct: 574 LTV--NNEYIACGSESNEVVVYHKAIPRPAACHGFGSQNPEGSDDDGSHFISAVCWKSEG 631
Query: 339 EDECTLVAGGSDGLLHVFV 357
T++A S G + V V
Sbjct: 632 P---TMLAANSQGTVKVLV 647
>gi|3121867|sp|P93471.1|COP1_PEA RecName: Full=E3 ubiquitin-protein ligase COP1; AltName:
Full=Constitutive photomorphogenesis protein 1
gi|1694900|emb|CAA70768.1| Cop1 protein [Pisum sativum]
gi|8574409|emb|CAB94801.1| COP1 regulatory protein [Pisum sativum]
Length = 672
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 183/317 (57%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ S +V+ P A H V + + T +KLS L
Sbjct: 371 VSSIEFDRDDDLFATAGVSRRIKVFDF-SAVVNEPTDA---HCPVVE--MTTRSKLSCLS 424
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W ++ S DY+G+V + + + + E +EH +R WSVD+S+ DP + SGSDD
Sbjct: 425 WNKYAKNQI-ASSDYEGIVTVWTMTTRKSLMEYEEHE-KRAWSVDFSRTDPSMLVSGSDD 482
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +CCV+++P + +A G AD + YD+R +
Sbjct: 483 CKVKVW---CTNQE--ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISR 537
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL D L +A TD L+LW+V + +RT++GH N +NFVGL+V
Sbjct: 538 PVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQNLPVRTFRGHANEKNFVGLTV 597
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ CGSETN+VFVY +P+ H F + +E F+S+VCW+ D
Sbjct: 598 --RSEYIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGSYFISAVCWK---SD 652
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 653 RPTILTANSQGTIKVLV 669
>gi|168027087|ref|XP_001766062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682705|gb|EDQ69121.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 687
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 182/319 (57%), Gaps = 21/319 (6%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + IEFD D FAT G++R+I++++ V+ D VA V H V + I T +KLS
Sbjct: 384 SNIVSSIEFDRDDEFFATAGVSRRIKVFDFSRVVND---VADV-HCPVVE--IPTRSKLS 437
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W ++ S DY+G+V +D+ + + E +EH RR WSVD+S+ +P + SG
Sbjct: 438 CLSWNKCEKS-LIASSDYEGIVTLWDVNTRQSVMEYEEHE-RRAWSVDFSRTEPSMLVSG 495
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDDG +++W R + ++ R+ +CCV+++P S+ +A G AD + +D+R
Sbjct: 496 SDDGKVKVWCTRQE-----TSALSLDMRANICCVKYNPGSSNHIAVGSADHHIHYFDLRN 550
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
P+ VF GHRK V+Y++F+ L +A TD L+LW+V + RT +GH N +NFVG
Sbjct: 551 ARIPLYVFKGHRKAVSYVKFISPTELASASTDSTLRLWDVQKDCLTRTLRGHTNEKNFVG 610
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSERGFVSSVCWRRVG 338
L+V + + CGSE+N+VFVY +P H F P + F+S+VCW+
Sbjct: 611 LTV--NSEYVACGSESNEVFVYHKAMSKPAAWHRFGSQNPDDSDDDSSHFISAVCWK--- 665
Query: 339 EDECTLVAGGSDGLLHVFV 357
+ T++A S G + V V
Sbjct: 666 SESPTMLAANSQGTIKVLV 684
>gi|15029364|gb|AAK81856.1|AF394913_1 photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar]
Length = 662
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 182/317 (57%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD +FAT G+++ I++++ SV+ D + H+ V + + T +KLS L
Sbjct: 361 VSSIEFDRDYELFATAGVSKCIKVFDFSSVVNDPADM----HTAVVE--MPTRSKLSCLS 414
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T + S DY+G+V +D++ + + E +EH +R WSVD+S +P + SGSDD
Sbjct: 415 WNKFTKNHI-ASTDYEGIVTVWDVDTRQSVMEYEEHE-KRAWSVDFSCTEPSMLVSGSDD 472
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W R + +V ++ +CCV+++P S+ +A G AD + YD+R +
Sbjct: 473 CKVKVWCTRQEA-----SVLNIDMKANICCVKYNPGSSNCIAVGSADHHIHYYDLRNVSQ 527
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GHRK V+Y++FL L +A TD L+LWNV D+ +RT+KGH N +NFVGL+V
Sbjct: 528 PLHVFTGHRKAVSYVKFLSNYELASASTDSTLRLWNVKDNIPVRTFKGHTNEKNFVGLTV 587
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +PV H F +E F+S+VCW+ D
Sbjct: 588 --NSEYIACGSETNEVFVYHKEISKPVTWHRFGSPDMEDTEDDAGSYFISAVCWK---SD 642
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 643 SPTMLTANSQGTIKVLV 659
>gi|302793522|ref|XP_002978526.1| hypothetical protein SELMODRAFT_176960 [Selaginella moellendorffii]
gi|300153875|gb|EFJ20512.1| hypothetical protein SELMODRAFT_176960 [Selaginella moellendorffii]
Length = 647
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/323 (37%), Positives = 182/323 (56%), Gaps = 28/323 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + IEFD D +FAT G++R+I+I+ +V+ + V H V + + T +KLS
Sbjct: 343 SNIVSSIEFDRDDELFATAGVSRRIKIFEFATVVNELADV----HCPVAE--MSTRSKLS 396
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W G++ S DY+G V +D+ + E +EH RR WSVD+S+ DP + SG
Sbjct: 397 CLSWNKYIKGQI-ASSDYEGTVTVWDVNSCQSVMEYEEHE-RRAWSVDFSRTDPTMLVSG 454
Query: 162 SDDG-TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
SDDG +++W R + ++V ++ +CCV+++P S+ VA G AD + YD+R
Sbjct: 455 SDDGKVVKLWCTRQE-----TSVLNIDMKANICCVKYNPGSSNFVAVGSADHHIHYYDLR 509
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
P+ VF GHRK V+Y++F+ + L +A TD L+LW+V S IR+ GH N +NFV
Sbjct: 510 NSKSPLHVFSGHRKAVSYVKFVSPNELASASTDSTLRLWDVQKSSQIRSLTGHANEKNFV 569
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG------FVSSVCW 334
GL+V + + CGSETN+V VY +P H F T SE F+S+VCW
Sbjct: 570 GLTV--NSEYIACGSETNEVVVYHKEVPKPAARHRF---TNHDSEESDDDVFHFISAVCW 624
Query: 335 RRVGEDECTLVAGGSDGLLHVFV 357
+ D T++A S G + V V
Sbjct: 625 K---SDSPTMLAANSQGTIKVLV 644
>gi|294464327|gb|ADE77676.1| unknown [Picea sitchensis]
Length = 347
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/332 (37%), Positives = 188/332 (56%), Gaps = 40/332 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD +FAT G+ ++I+++ ++L +++PV+ ++ SK
Sbjct: 36 SNLVCSLSFDRDKELFATAGVNKRIKVFECDTILNDNMDINYPVIEMIGKSK-------- 87
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
S++ W ++ S D++GVV +D + PI + EHG +RVWSVD+S+ DP
Sbjct: 88 ---FSNVCWNSHIKNQI-ASSDFEGVVRIWDATRSQPIMDYKEHG-KRVWSVDFSQSDPT 142
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
ASGSDD T+++W + G VST++ A+ VCCV+F P L+A G AD K Y
Sbjct: 143 KLASGSDDCTVKLWS--INQGGSVSTIRTKAN---VCCVQFQPDSGHLIALGSADYKIYC 197
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV--NDSRV----IRTY 270
YD+R + P + H KTV+Y++FLD +LV+A TD LKLW++ N R+ +RT+
Sbjct: 198 YDLRNIKTPWYILASHSKTVSYVKFLDSASLVSASTDNTLKLWDLATNKGRILKNPVRTF 257
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSE-- 325
GH N +NFVGLSV G + GSETN+VFVY PV + F +P+T E
Sbjct: 258 TGHTNVKNFVGLSV--ADGYIATGSETNEVFVYHKSLPMPVASYKFNCEDPMTGLEMEDD 315
Query: 326 -RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVS VCWR G+ + TLVA S G + +
Sbjct: 316 SAQFVSCVCWR--GQTQ-TLVATNSTGNIKIL 344
>gi|302786202|ref|XP_002974872.1| hypothetical protein SELMODRAFT_101639 [Selaginella moellendorffii]
gi|300157767|gb|EFJ24392.1| hypothetical protein SELMODRAFT_101639 [Selaginella moellendorffii]
Length = 283
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 169/304 (55%), Gaps = 27/304 (8%)
Query: 57 FATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY---YICTPAKLSSLKWKPGTSGRV 113
FAT G++R+I+++ AVV+ S Y I + AKLS L W +
Sbjct: 1 FATAGVSRRIKVFEYS---------AVVNSSADVHYPAMEIPSRAKLSCLSWNKCIKHHI 51
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
S DYDG V +D+ I E +EH +R WSVD+++ DP L SGSDDG +++W R
Sbjct: 52 -ASSDYDGHVTIWDVNNAQSIMEYEEHA-KRAWSVDFARTDPNLLVSGSDDGKLKVWSTR 109
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
+ S+V ++ +CCV+F+P S+ VA G AD + + YD+R PV F GH+
Sbjct: 110 QE-----SSVMGIDMKANICCVKFNPSSSNFVAVGSADHRIHYYDLRSPASPVHTFSGHQ 164
Query: 234 KTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGC 293
KTV+Y++F+ + LV+A TD L++WNV + IRT GH+N RNFVGLS + + C
Sbjct: 165 KTVSYVKFITPEELVSASTDSTLRIWNVRTNTPIRTLTGHINERNFVGLS--GNSDYVTC 222
Query: 294 GSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLL 353
GSETN+VFVY P H F + F+S+VCW+ D TL+A S G +
Sbjct: 223 GSETNEVFVYHKAISRPATRHRFGSL---DDSLHFISAVCWK---SDSPTLLAANSQGTI 276
Query: 354 HVFV 357
V V
Sbjct: 277 KVLV 280
>gi|308802161|ref|XP_003078394.1| COP1-like protein (ISS) [Ostreococcus tauri]
gi|116056846|emb|CAL53135.1| COP1-like protein (ISS) [Ostreococcus tauri]
Length = 635
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 179/316 (56%), Gaps = 29/316 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLV--DHPVVAVVDHSKVCDYYICTPAKLSS 102
I IEFD ++ FAT G++++I+ YN++ VL P ++ HSK L+
Sbjct: 343 ISSIEFDSTEENFATAGVSKRIQFYNLERVLAGSRQPAEQIMTHSK-----------LTC 391
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
L + + S DY+GVV +D+EKK I + +EH +R+WSVD+ + +P L SGS
Sbjct: 392 LSYNKLIRQHIAAS-DYEGVVSIWDVEKKRAIIDFEEHE-KRIWSVDFCRSNPSLLVSGS 449
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W+ D V + A+ VCCV+F P +A C ++KAY +D+R++
Sbjct: 450 DDYLVKIWNT--DQRNSVHEIDMEAN---VCCVQFSPNDDHGIAISCVNQKAYIFDLRRL 504
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+P+ V + HRK V+YI++L+ +VTA TD + +WN N + T KGH+N RNFVGL
Sbjct: 505 DEPLHVLEAHRKAVSYIKYLNAKEVVTASTDNTINVWNTNSGDLTCTLKGHLNERNFVGL 564
Query: 283 SVW--RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
+ +H + CGSETN+VF+Y P+ F A ERGF+S+ W+ D
Sbjct: 565 TTAGSQH---IACGSETNEVFLYRKDLPMPITSISFAQ-ERAPEERGFISACTWK---SD 617
Query: 341 ECTLVAGGSDGLLHVF 356
+ L+ S+G++ VF
Sbjct: 618 DSVLIGANSNGVVRVF 633
>gi|402685|gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]
Length = 675
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 181/320 (56%), Gaps = 28/320 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV---VAVVDHSKVCDYYICTPAKLS 101
+ IEFD D +FAT G++R I++++ S V+ P +V+ S T +KLS
Sbjct: 374 VSSIEFDRDDELFATAGVSRCIKVFDFSS-FVNEPADMQCPIVEMS--------TRSKLS 424
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W + S DY+G+V +D+ + E +EH +R WSVD+S+ +P + SG
Sbjct: 425 CLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSRMEYEEHE-KRAWSVDFSRTEPSMLVSG 482
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD +++W R + +V ++ +CCV+++P S+ +A G AD + YD+R
Sbjct: 483 SDDCKVKVWCTRQEA-----SVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRN 537
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ P+ VF GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NFVG
Sbjct: 538 ISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVG 597
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSERG--FVSSVCWRRV 337
L+V + L CGSETN+V+VY PV H F + A E G F+S+VCW+
Sbjct: 598 LTV--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWK-- 653
Query: 338 GEDECTLVAGGSDGLLHVFV 357
D T++ S G + V V
Sbjct: 654 -SDSPTMLTANSQGTIKVLV 672
>gi|449516806|ref|XP_004165437.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 494
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 183/317 (57%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R I++++ SV+ + P H + + + T AKLS L
Sbjct: 193 VSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDA----HCPIVE--MSTRAKLSCLS 246
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S ++ S DY+G+V +D+ + + E +EH +R WSVD+S+ +P SGSDD
Sbjct: 247 WDK-QSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHE-KRAWSVDFSRTEPSRLVSGSDD 304
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C K ++V ++ +CCV+F+P + +A G AD + YD+R +
Sbjct: 305 CKVKVW---C--MKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 359
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GH+K V+Y++FL L +A TD L+LW+V ++ +RT++GH N +NFVGL+V
Sbjct: 360 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 419
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSERG--FVSSVCWRRVGED 340
+ + CGSETN+VFVY P+ H F VT + G F+S+VCW+ D
Sbjct: 420 --NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVTDVEDDVGSYFISAVCWK---SD 474
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 475 SPTILTANSQGTIKVLV 491
>gi|384253047|gb|EIE26522.1| WD40 repeat-like protein [Coccomyxa subellipsoidea C-169]
Length = 533
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 185/332 (55%), Gaps = 33/332 (9%)
Query: 33 SSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY 92
+S+ AA+ SI EFD +VFAT G++++I +++ +VL HP V H +
Sbjct: 223 ASARQQAAILSSI---EFDRDRAVFATAGVSKRISLFDYANVLA-HP--HVQQHCPAAE- 275
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
+ T +KLS L W ++ S DY+G V +D++ + + E + H +R+WSVDYS
Sbjct: 276 -LVTRSKLSCLSWNKYVRSHIISS-DYEGCVTLWDVDTQATVNEYEAHD-KRIWSVDYST 332
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS-----RSAVCCVEFHPFGSSLVAA 207
DP+L SGSDDG +++W ST Q +A+ R+ VCCV+++P + +A
Sbjct: 333 ADPLLFVSGSDDGFIKVW----------STNQAAAAVAIDMRANVCCVKYNPASAHEIAV 382
Query: 208 GCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVI 267
G AD + YD+R + PV VF GHRK V+Y+R+L +V+A TD L+LWN
Sbjct: 383 GSADHSVHLYDLRNVSAPVHVFAGHRKAVSYVRYLSSTEVVSASTDSTLRLWNTQTLSQT 442
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-- 325
R + GHVN +NFVGLSV + CGSET++V+VY +P+ F TA+G
Sbjct: 443 RRFSGHVNEKNFVGLSV--DSEFIACGSETDEVYVYYRALAKPIAKRVFSGPTASGQASE 500
Query: 326 -RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+S+VCW+ + L+A S G + +
Sbjct: 501 GSQFISAVCWKPQAQ---VLLAANSQGCIKLM 529
>gi|449450966|ref|XP_004143233.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 675
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 182/317 (57%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R I++++ SV+ + P H + + + T AKLS L
Sbjct: 374 VSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPPDA----HCPIVE--MSTRAKLSCLS 427
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S ++ S DY+G+V +D+ + + E +EH +R WSVD+S+ +P SGSDD
Sbjct: 428 WDK-QSKNIIASSDYEGIVTVWDVNRGQSVMEYEEHE-KRAWSVDFSRTEPSRLVSGSDD 485
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W K ++V ++ +CCV+F+P + +A G AD + YD+R +
Sbjct: 486 CKVKVW-----CMKQEASVLDIDMKANICCVKFNPGSGNHIAVGSADHNIHYYDLRNISH 540
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GH+K V+Y++FL L +A TD L+LW+V ++ +RT++GH N +NFVGL+V
Sbjct: 541 PLHVFTGHKKAVSYVKFLSNSELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV 600
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSERG--FVSSVCWRRVGED 340
+ + CGSETN+VFVY P+ H F VT + G F+S+VCW+ D
Sbjct: 601 --NNEYIACGSETNEVFVYHKEISRPLTWHRFGSPDVTDVEDDVGSYFISAVCWK---SD 655
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 656 SPTILTANSQGTIKVLV 672
>gi|224116030|ref|XP_002317189.1| predicted protein [Populus trichocarpa]
gi|222860254|gb|EEE97801.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 177/316 (56%), Gaps = 21/316 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I+I+ V+ + V H V + + T +KLS +
Sbjct: 307 VSSIEFDRDDELFATTGVSRRIKIFEFSKVMNEPEDV----HCPVVE--MSTRSKLSCVS 360
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W + S DY+G+V +D+ + I E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 361 WNKYMKNHI-ASSDYEGIVTVWDVTTRQSIMEYEEHE-KRAWSVDFSQNEPSMLVSGSDD 418
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W K ++V ++ +C V+++P S VA G AD + YD+R +
Sbjct: 419 CKVKIW-----CTKQEASVLNIDMKANICSVKYNPGSSIHVAVGSADHHIHYYDLRNISQ 473
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GH KTV+Y++FL D L ++ TD L+LW+V ++ +RT++GH N RNFVGL+V
Sbjct: 474 PLYVFRGHWKTVSYVKFLSSDELASSSTDSTLRLWDVKENLALRTFRGHTNERNFVGLTV 533
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG---FVSSVCWRRVGEDE 341
+ + CGSETN+VFVY +P H F G + F S+VCW+ D
Sbjct: 534 --NSEYIACGSETNEVFVYHKAISKPAASHRFSTDLENGGDDARSYFTSAVCWK---SDS 588
Query: 342 CTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 589 PTMLTANSQGTIKVLV 604
>gi|225447155|ref|XP_002271415.1| PREDICTED: E3 ubiquitin-protein ligase COP1 [Vitis vinifera]
gi|297739218|emb|CBI28869.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 203 bits (517), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 180/316 (56%), Gaps = 22/316 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ SV+ + + H V + + T +KLS L
Sbjct: 375 VSSIEFDCDDELFATAGVSRRIKVFDFSSVVNERAEM----HCPVVE--MSTRSKLSCLS 428
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P SGSDD
Sbjct: 429 WNKCTKNHI-ASSDYEGIVTVWDVNTRQSVMEYEEHE-KRAWSVDFSRTEPSRLVSGSDD 486
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +CCV+++P S +A G AD + YD+R
Sbjct: 487 CKVKVW---CTNQE--ASVLNIDMKANICCVKYNPGSSIYIAVGSADHHIHYYDLRNTSH 541
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ +F GH+K V+Y++FL + L +A TD L+LW+V ++ +RT++GH N +NFVGLSV
Sbjct: 542 PLHIFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLSV 601
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-EPVTAAGSERG---FVSSVCWRRVGED 340
+ + CGSETN VFVY +PV H F P + F+S+VCW+ D
Sbjct: 602 --NSEYISCGSETNDVFVYHKEISKPVTWHKFGSPDVDDLDDDVGPYFISAVCWK---SD 656
Query: 341 ECTLVAGGSDGLLHVF 356
T++ S G + V
Sbjct: 657 SPTMLTANSQGTIKVL 672
>gi|296090656|emb|CBI41056.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 180/317 (56%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I+++ SV V+ P H V + + T +KLS L
Sbjct: 301 VSSIEFDRDDELFATAGVSRRIKVFEFSSV-VNEPADV---HCPVVE--MSTRSKLSCLS 354
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 355 WNKYTKNHI-ASSDYEGIVTVWDVTTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 412
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C K ++V ++ +C V+++P S VA G AD + YD+R +
Sbjct: 413 CKVKIW---C--TKQEASVLNIDMKANICSVKYNPGSSIYVAVGSADHHIHYYDLRNISQ 467
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GHRK V+Y++FL + L +A TD L+LW+V ++ +RT++GH N +NFVGL+V
Sbjct: 468 PLHVFSGHRKAVSYVKFLSNNELASASTDSTLRLWDVKENMPVRTFRGHSNEKNFVGLTV 527
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VF Y +P H F ++ F+S+VCW+ D
Sbjct: 528 --NSEYIACGSETNEVFAYHKAISKPAAWHRFGSSDLDDTDDDNGSYFISAVCWK---SD 582
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 583 SPTMLTANSQGTIKVLV 599
>gi|7688065|emb|CAB89694.1| constitutively photomorphogenic 1 protein [Pisum sativum]
Length = 968
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 184/318 (57%), Gaps = 26/318 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ S +V+ P A H V + + T +KLS L
Sbjct: 669 VSSIEFDRDDDLFATAGVSRRIKVFDF-SAVVNEPTDA---HCPVVE--MTTRSKLSCLS 722
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W ++ S DY+G+V +D+ + + E +EH +R WSVD+S+ DP + SGSDD
Sbjct: 723 WNKYAKNQI-ASSDYEGIVTVWDVTTRKSLMEYEEHE-KRAWSVDFSRTDPSMLVSGSDD 780
Query: 165 -GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
+++W C + ++V ++ +CCV+++P + +A G AD + YD+R +
Sbjct: 781 CKQVKVW---CTNQE--ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNIS 835
Query: 224 DPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
PV VF GH+K V+Y++FL D L +A TD L+LW+V + +RT++GH N +NFVGL+
Sbjct: 836 RPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQNLPVRTFRGHANEKNFVGLT 895
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGE 339
V + CGSETN+VFVY EP+ H F + +E F+S+VCW+
Sbjct: 896 V--SSEYIACGSETNEVFVY---HKEPLTWHRFGTLDMEDAEDEAGSYFISAVCWK---S 947
Query: 340 DECTLVAGGSDGLLHVFV 357
D T++ S G + V V
Sbjct: 948 DRPTILTANSQGTIKVLV 965
>gi|147825286|emb|CAN71084.1| hypothetical protein VITISV_028588 [Vitis vinifera]
Length = 676
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 179/321 (55%), Gaps = 32/321 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----PVVAVVDHSKVCDYYICTPAK 99
+ IEFD D +FAT G++R+I++++ SV+ + PVV + T +K
Sbjct: 375 VSSIEFDCDDELFATAGVSRRIKVFDFSSVVNERAEXHCPVVE-----------MSTRSK 423
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
LS L W T + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P
Sbjct: 424 LSCLSWNKCTKNHI-ASSDYEGIVTVWDVNTRQSVMEYEEHE-KRAWSVDFSRTEPSRLV 481
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W C + ++V ++ +CCV+++P S +A G AD + YD+
Sbjct: 482 SGSDDCKVKVW---CTNQE--ASVLNIDMKANICCVKYNPGSSIYIAVGSADHHIHYYDL 536
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P+ +F GH+K V+Y++FL + L +A TD L+LW+V ++ +RT++GH N +NF
Sbjct: 537 RNTSHPLHIFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLPVRTFRGHTNEKNF 596
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-EPVTAAGSERG---FVSSVCWR 335
VGLSV + + CGSETN VFVY +PV H F P + F+S+VCW+
Sbjct: 597 VGLSV--NSEYISCGSETNDVFVYHKEISKPVTWHKFGSPDVDDLDDDVGPYFISAVCWK 654
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
D T++ S G + V
Sbjct: 655 ---SDSPTMLTANSQGTIKVL 672
>gi|359483452|ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 687
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 180/317 (56%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I+++ SV V+ P H V + + T +KLS L
Sbjct: 386 VSSIEFDRDDELFATAGVSRRIKVFEFSSV-VNEPADV---HCPVVE--MSTRSKLSCLS 439
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 440 WNKYTKNHI-ASSDYEGIVTVWDVTTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 497
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C K ++V ++ +C V+++P S VA G AD + YD+R +
Sbjct: 498 CKVKIW---C--TKQEASVLNIDMKANICSVKYNPGSSIYVAVGSADHHIHYYDLRNISQ 552
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GHRK V+Y++FL + L +A TD L+LW+V ++ +RT++GH N +NFVGL+V
Sbjct: 553 PLHVFSGHRKAVSYVKFLSNNELASASTDSTLRLWDVKENMPVRTFRGHSNEKNFVGLTV 612
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VF Y +P H F ++ F+S+VCW+ D
Sbjct: 613 --NSEYIACGSETNEVFAYHKAISKPAAWHRFGSSDLDDTDDDNGSYFISAVCWK---SD 667
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 668 SPTMLTANSQGTIKVLV 684
>gi|449455449|ref|XP_004145465.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 663
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 179/330 (54%), Gaps = 36/330 (10%)
Query: 36 SPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVC 90
SPN S IEFD D FAT G++R I+++ SV+ V PVV +
Sbjct: 359 SPNIVSS-----IEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMA------ 407
Query: 91 DYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDY 150
T +KLS L W T + S DY+G+V +D+ + + E +EH +R WSVD+
Sbjct: 408 -----TRSKLSCLSWNKYTKSHI-ASSDYEGIVTVWDVNTRQSVMEYEEHE-KRAWSVDF 460
Query: 151 SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA 210
S+ +P + SGSDD +++W R + +V ++ VC V+++P S VA G A
Sbjct: 461 SRSEPSMLVSGSDDCKVKIWCTRQEA-----SVFNIDMKANVCSVKYNPGSSLYVAVGSA 515
Query: 211 DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTY 270
D + YD+R + P+ VF+GH+K V+Y++FL + L +A TD L+LW+V ++ I Y
Sbjct: 516 DHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLPICVY 575
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG--- 327
+GH N +NFVGL+V + + CGSETN+VF+Y +P+ H F E
Sbjct: 576 RGHTNEKNFVGLTV--NSEYIACGSETNEVFIYHKAISKPMAWHRFSSDLEDNDEDAGSY 633
Query: 328 FVSSVCWRRVGEDECTLVAGGSDGLLHVFV 357
F+S+VCW+ D T++ S G + V V
Sbjct: 634 FISAVCWK---SDSPTILTANSQGTIKVLV 660
>gi|226501498|ref|NP_001145835.1| uncharacterized protein LOC100279342 [Zea mays]
gi|219884613|gb|ACL52681.1| unknown [Zea mays]
gi|413924382|gb|AFW64314.1| hypothetical protein ZEAMMB73_321715 [Zea mays]
Length = 655
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 184/317 (58%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 354 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 407
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S ++ S DY+G+V +D++ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 408 WN-KYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 465
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W K ++V ++ +C V+++P S VA G AD + +D+R
Sbjct: 466 CKVKVW-----CTKQEASVINIDMKANICSVKYNPGSSFYVAVGSADHHIHYFDLRNPSA 520
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NFVGLSV
Sbjct: 521 PVHVFGGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHKNEKNFVGLSV 580
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSERG--FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F + A + G F+S+VCW+ D
Sbjct: 581 --NNEYIACGSETNEVFVYHKAISKPAASHRFVSSNLDDADDDPGSYFISAVCWK---SD 635
Query: 341 ECTLVAGGSDGLLHVFV 357
T++A S G + V V
Sbjct: 636 SPTMLAANSQGTIKVHV 652
>gi|449513531|ref|XP_004164350.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 670
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 179/330 (54%), Gaps = 36/330 (10%)
Query: 36 SPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVC 90
SPN S IEFD D FAT G++R I+++ SV+ V PVV +
Sbjct: 366 SPNIVSS-----IEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMA------ 414
Query: 91 DYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDY 150
T +KLS L W T + S DY+G+V +D+ + + E +EH +R WSVD+
Sbjct: 415 -----TRSKLSCLSWNKYTKSHI-ASSDYEGIVTVWDVNTRQSVMEYEEHE-KRAWSVDF 467
Query: 151 SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA 210
S+ +P + SGSDD +++W R + +V ++ VC V+++P S VA G A
Sbjct: 468 SRSEPSMLVSGSDDCKVKIWCTRQEA-----SVFNIDMKANVCSVKYNPGSSLYVAVGSA 522
Query: 211 DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTY 270
D + YD+R + P+ VF+GH+K V+Y++FL + L +A TD L+LW+V ++ I Y
Sbjct: 523 DHNIHYYDLRNISQPLHVFNGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENLPICVY 582
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG--- 327
+GH N +NFVGL+V + + CGSETN+VF+Y +P+ H F E
Sbjct: 583 RGHTNEKNFVGLTV--NSEYIACGSETNEVFIYHKAISKPMAWHRFSSDLEDNDEDAGSY 640
Query: 328 FVSSVCWRRVGEDECTLVAGGSDGLLHVFV 357
F+S+VCW+ D T++ S G + V V
Sbjct: 641 FISAVCWK---SDSPTILTANSQGTIKVLV 667
>gi|168040460|ref|XP_001772712.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675937|gb|EDQ62426.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 687
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 179/319 (56%), Gaps = 21/319 (6%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + IEFD D FAT G++R+++++N ++V+ + V H + + I T +KLS
Sbjct: 384 SNIVSSIEFDRDDEFFATAGVSRRVKVFNFETVVNELADV----HCPLVE--IATRSKLS 437
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W + ++ S DY+G V +D+ + + E +EH +R WSVD+S+ +P + SG
Sbjct: 438 CLSWNK-CAKPLIASSDYEGTVTVWDVNTRQAVMEYEEHE-KRAWSVDFSRTEPSMLVSG 495
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDDG +++W R + S+ R+ +CCV+++P S+ +A G AD + +D+R
Sbjct: 496 SDDGKVKVWCTRQE-----SSALSLDMRANICCVKYNPGSSNHIAVGSADHCIHYFDLRN 550
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
P+ VF GHRK V+Y++F+ L +A TD L+LW+V IRT +GH N +NFVG
Sbjct: 551 ASTPLYVFKGHRKAVSYVKFISPTELASASTDSTLRLWDVQRDCSIRTLRGHTNEKNFVG 610
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGS---ERGFVSSVCWRRVG 338
L+V + + CGSE+N+VFVY P H F + + F+S+VCW+
Sbjct: 611 LTV--NNEYIACGSESNEVFVYHKAMSRPASWHRFGSHNSEDNGDDSSHFISAVCWK--- 665
Query: 339 EDECTLVAGGSDGLLHVFV 357
T++A S G + V
Sbjct: 666 SQSPTMLAANSQGTIKVLA 684
>gi|218191653|gb|EEC74080.1| hypothetical protein OsI_09100 [Oryza sativa Indica Group]
Length = 636
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 180/317 (56%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 335 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 388
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S V+ S DY+G+V +D++ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 389 WN-KYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 446
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W + + + ++ +C V+++P S VA G AD + +D+R
Sbjct: 447 CKVKVWCTKQEASAINIDM-----KANICSVKYNPGSSHYVAVGSADHHIHYFDLRNPSA 501
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL + L +A TD L+LW+V ++ +RT++GH N +NFVGLSV
Sbjct: 502 PVHVFGGHKKAVSYVKFLSTNELASASTDSTLRLWDVKENCPVRTFRGHKNEKNFVGLSV 561
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F ++ F+S+VCW+ D
Sbjct: 562 --NNEYIACGSETNEVFVYHKAISKPAANHRFVSSDLDDADDDPGSYFISAVCWK---SD 616
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 617 SPTMLTANSQGTIKVLV 633
>gi|302773880|ref|XP_002970357.1| hypothetical protein SELMODRAFT_147206 [Selaginella moellendorffii]
gi|300161873|gb|EFJ28487.1| hypothetical protein SELMODRAFT_147206 [Selaginella moellendorffii]
Length = 467
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 203/376 (53%), Gaps = 38/376 (10%)
Query: 8 QQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIR 67
+ P+ E+ ++ W+F S + P+ SD I I++D + + ATGG+ARKIR
Sbjct: 92 RMPEPESCDQSRHETWEFETLVPFSCET-PSLLSSDVISTIDYDETGQLIATGGLARKIR 150
Query: 68 IYNIKSVLVDHPVVAVVDHSKVCDYY--ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVME 125
I + + LV+ V + + IC PAKLSSLKW+PG S V+ GDYDG V E
Sbjct: 151 ICSYQE-LVNGMGRECFQGRNVKNLFTTICMPAKLSSLKWRPGGS-EVIACGDYDGSVTE 208
Query: 126 YDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP 185
+D+E V + ER EH GR VWS+DYS+ L AS S D T++ W + + V ++
Sbjct: 209 WDVEHGVTVSERYEHTGRTVWSIDYSRDFRGLLASASSDSTVRFWSRNVE--RSVGIIK- 265
Query: 186 SASRSAVCCVEFHPFGSS-----LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIR 240
S R+++CCVE FG S VA CAD Y YD+R + PV GH ++V+Y+R
Sbjct: 266 SLKRNSMCCVE---FGRSSGPCCYVAVACADASVYLYDMRSLGSPVATLRGHERSVSYVR 322
Query: 241 FLDVDTLVTAGTDGCLKLWNV--------------NDSRVI-RTYKGHVNNRNFV----G 281
+L ++LV++ DG ++LW++ ND I RT+ H N RNFV
Sbjct: 323 WLGENSLVSSSPDGTIRLWDIASTVTGTGESWHARNDELPIARTFGCHSNTRNFVGLSVA 382
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGE-PVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S GGL+ GSE N+VFVY E PV+ H F ++ FV SVCW + +D
Sbjct: 383 SSGGGSGGLIASGSENNEVFVYSSSVSERPVFRHKFNDAVVL-DDKAFVGSVCWTK-QQD 440
Query: 341 ECTLVAGGSDGLLHVF 356
+L++ S+G++ V
Sbjct: 441 HLSLISANSEGIVQVI 456
>gi|46805328|dbj|BAD16847.1| putative COP1, constitutive photomorphogenesis 1 [Oryza sativa
Japonica Group]
Length = 604
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 180/317 (56%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 303 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 356
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S V+ S DY+G+V +D++ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 357 WN-KYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 414
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W + + + ++ +C V+++P S VA G AD + +D+R
Sbjct: 415 CKVKVWCTKQEASAINIDM-----KANICSVKYNPGSSHYVAVGSADHHIHYFDLRNPSA 469
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL + L +A TD L+LW+V ++ +RT++GH N +NFVGLSV
Sbjct: 470 PVHVFGGHKKAVSYVKFLSTNELASASTDSTLRLWDVKENCPVRTFRGHKNEKNFVGLSV 529
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F ++ F+S+VCW+ D
Sbjct: 530 --NNEYIACGSETNEVFVYHKAISKPAANHRFVSSDLDDADDDPGSYFISAVCWK---SD 584
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 585 SPTMLTANSQGTIKVLV 601
>gi|13925701|gb|AAK49415.1|AF261992_1 COP1, partial [Oryza sativa Indica Group]
Length = 519
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 180/317 (56%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 218 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 271
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S V+ S DY+G+V +D++ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 272 WN-KYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 329
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W + + + ++ +C V+++P S VA G AD + +D+R
Sbjct: 330 CKVKVWCTKQEASAINIDM-----KANICSVKYNPGSSHYVAVGSADHHIHYFDLRNPSA 384
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL + L +A TD L+LW+V ++ +RT++GH N +NFVGLSV
Sbjct: 385 PVHVFGGHKKAVSYVKFLSTNELASASTDSTLRLWDVKENCPVRTFRGHKNEKNFVGLSV 444
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F ++ F+S+VCW+ D
Sbjct: 445 --NNEYIACGSETNEVFVYHKAISKPAANHRFVSSDLDDADDDPGSYFISAVCWK---SD 499
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 500 SPTMLTANSQGTIKVLV 516
>gi|125583833|gb|EAZ24764.1| hypothetical protein OsJ_08537 [Oryza sativa Japonica Group]
Length = 685
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 180/317 (56%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 384 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 437
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S V+ S DY+G+V +D++ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 438 WN-KYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 495
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W + + + ++ +C V+++P S VA G AD + +D+R
Sbjct: 496 CKVKVWCTKQEASAINIDM-----KANICSVKYNPGSSHYVAVGSADHHIHYFDLRNPSA 550
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL + L +A TD L+LW+V ++ +RT++GH N +NFVGLSV
Sbjct: 551 PVHVFGGHKKAVSYVKFLSTNELASASTDSTLRLWDVKENCPVRTFRGHKNEKNFVGLSV 610
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F ++ F+S+VCW+ D
Sbjct: 611 --NNEYIACGSETNEVFVYHKAISKPAANHRFVSSDLDDADDDPGSYFISAVCWK---SD 665
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 666 SPTMLTANSQGTIKVLV 682
>gi|326499049|dbj|BAK06015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 693
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 181/317 (57%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 392 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 445
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S V+ S DY+G+V +D++ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 446 WN-KYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTEPKMLVSGSDD 503
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + S + ++ +C V+++P S VA G AD + +D+R
Sbjct: 504 CKVKVW---CTNQE-ASAINIDM-KANICSVKYNPGSSYYVAVGSADHHIHYFDLRNPSA 558
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NFVGLSV
Sbjct: 559 PLHVFGGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNCPLRTFRGHKNEKNFVGLSV 618
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F +E F+S+VCW+ D
Sbjct: 619 --NNEYIACGSETNEVFVYHKAISKPASSHRFLSTDLDDAEDDPGSYFISAVCWK---SD 673
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 674 SPTMLTANSQGTIKVLV 690
>gi|7592844|dbj|BAA94422.1| COP1 [Oryza sativa Japonica Group]
Length = 685
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 180/317 (56%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 384 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 437
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S V+ S DY+G+V +D++ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 438 WN-KYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 495
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W + + + ++ +C V+++P S VA G AD + +D+R
Sbjct: 496 CKVKVWCTKQEASAINIDM-----KANICSVKYNPGSSHYVAVGSADHHIHYFDLRNPSA 550
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL + L +A TD L+LW+V ++ +RT++GH N +NFVGLSV
Sbjct: 551 PVHVFGGHKKAVSYVKFLSTNELASASTDSTLRLWDVKENCPVRTFRGHKNEKNFVGLSV 610
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F ++ F+S+VCW+ D
Sbjct: 611 --NNEYIACGSETNEVFVYHKAISKPAANHRFVSSDLDDADDDPGSYFISAVCWK---SD 665
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 666 SPTMLTANSQGTIKVLV 682
>gi|115448949|ref|NP_001048254.1| Os02g0771100 [Oryza sativa Japonica Group]
gi|16151847|gb|AAL14875.1| copI [Oryza sativa]
gi|46805327|dbj|BAD16846.1| COP1, constitutive photomorphogenesis 1 [Oryza sativa Japonica
Group]
gi|113537785|dbj|BAF10168.1| Os02g0771100 [Oryza sativa Japonica Group]
gi|215767107|dbj|BAG99335.1| unnamed protein product [Oryza sativa Japonica Group]
gi|333943945|dbj|BAK26796.1| E3 ubiquitin-protein ligase [Oryza sativa Japonica Group]
Length = 685
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 180/317 (56%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 384 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 437
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S V+ S DY+G+V +D++ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 438 WN-KYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTEPSMLVSGSDD 495
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W + + + ++ +C V+++P S VA G AD + +D+R
Sbjct: 496 CKVKVWCTKQEASAINIDM-----KANICSVKYNPGSSHYVAVGSADHHIHYFDLRNPSA 550
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL + L +A TD L+LW+V ++ +RT++GH N +NFVGLSV
Sbjct: 551 PVHVFGGHKKAVSYVKFLSTNELASASTDSTLRLWDVKENCPVRTFRGHKNEKNFVGLSV 610
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F ++ F+S+VCW+ D
Sbjct: 611 --NNEYIACGSETNEVFVYHKAISKPAANHRFVSSDLDDADDDPGSYFISAVCWK---SD 665
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 666 SPTMLTANSQGTIKVLV 682
>gi|226503711|ref|NP_001152482.1| ubiquitin ligase protein COP1 [Zea mays]
gi|195656705|gb|ACG47820.1| ubiquitin ligase protein COP1 [Zea mays]
Length = 693
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 181/317 (57%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 392 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 445
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S ++ S DY+G+V +D++ + + E +EH +R WSVD+S+ D + SGSDD
Sbjct: 446 WN-KYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTDSSMLVSGSDD 503
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +C V+++P S VA G AD + +D+R
Sbjct: 504 CKVKVW---CTNQE--ASVINIDMKANICSVKYNPGSSFYVAVGSADHHIHYFDLRNPSS 558
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV +F GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NFVGLSV
Sbjct: 559 PVHIFGGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNCPVRTFRGHKNEKNFVGLSV 618
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F ++ F+S+VCW+ D
Sbjct: 619 --NNEYIACGSETNEVFVYHKAISKPAASHRFVSSDPDDADDDPGSYFISAVCWK---SD 673
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 674 SPTMLTANSQGTIKVLV 690
>gi|413939110|gb|AFW73661.1| ubiquitin ligase protein COP1 [Zea mays]
Length = 693
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 181/317 (57%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 392 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 445
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S ++ S DY+G+V +D++ + + E +EH +R WSVD+S+ D + SGSDD
Sbjct: 446 WN-KYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTDSSMLVSGSDD 503
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +C V+++P S VA G AD + +D+R
Sbjct: 504 CKVKVW---CTNQE--ASVINIDMKANICSVKYNPGSSFYVAVGSADHHIHYFDLRNPSS 558
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV +F GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NFVGLSV
Sbjct: 559 PVHIFGGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNCPVRTFRGHKNEKNFVGLSV 618
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F ++ F+S+VCW+ D
Sbjct: 619 --NNEYIACGSETNEVFVYHKAISKPAASHRFVSSDLDDADDDPGSYFISAVCWK---SD 673
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 674 SPTMLTANSQGTIKVLV 690
>gi|302782155|ref|XP_002972851.1| hypothetical protein SELMODRAFT_98534 [Selaginella moellendorffii]
gi|300159452|gb|EFJ26072.1| hypothetical protein SELMODRAFT_98534 [Selaginella moellendorffii]
Length = 731
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 182/353 (51%), Gaps = 48/353 (13%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----P 79
F ++ T+ N A + + + FD + FAT G+ +KI+++ +VL +H P
Sbjct: 403 FEVKATLRHGDLLNTA--NMVCSLSFDRDEEFFATAGVCKKIKVFECDTVLNEHVDIHYP 460
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
VV + SK LS++ W L S DYDGV+ +D + E E
Sbjct: 461 VVEMASRSK-----------LSNICWNSYIKSH-LASSDYDGVIQLWDASTSQTLVEYKE 508
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S DP ASGSDDGT+++W + T++ A+ VCCV+F
Sbjct: 509 HE-KRAWSVDFSHADPTKLASGSDDGTVKLWSINQEAS--TGTIKTKAN---VCCVQFPS 562
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
+ L+ G AD K Y YD+R P+ + H K V+Y+RF+D T+V+A TD LKLW
Sbjct: 563 DSAHLLTFGSADYKIYCYDLRNTKGPLCILSSHNKAVSYVRFVDSSTIVSASTDSTLKLW 622
Query: 260 NVNDSRVIR----------TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
++ S+V+R TY GH N +NFVGLSV G + CGSETN VF Y
Sbjct: 623 DL--SKVMRNGNSSNACSLTYTGHTNEKNFVGLSV--SDGYIACGSETNAVFCYHKSLPM 678
Query: 310 PVWVHDF---EPVTAAGSER---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
P+ H F +PV+ +E FVSSVCWR + TL+A S G + V
Sbjct: 679 PLATHKFGSSDPVSGQENEDDGGQFVSSVCWRGKSQ---TLLAANSMGNIKVL 728
>gi|302805344|ref|XP_002984423.1| hypothetical protein SELMODRAFT_181056 [Selaginella moellendorffii]
gi|300147811|gb|EFJ14473.1| hypothetical protein SELMODRAFT_181056 [Selaginella moellendorffii]
Length = 731
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 182/353 (51%), Gaps = 48/353 (13%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----P 79
F ++ T+ N A + + + FD + FAT G+ +KI+++ +VL +H P
Sbjct: 403 FEVKATLRHGDLLNTA--NMVCSLSFDRDEEFFATAGVCKKIKVFECDTVLNEHVDIHYP 460
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
VV + SK LS++ W L S DYDGV+ +D + E E
Sbjct: 461 VVEMASRSK-----------LSNICWNSYIKSH-LASSDYDGVIQLWDASTSQTLVEYKE 508
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S DP ASGSDDGT+++W + T++ A+ VCCV+F
Sbjct: 509 HE-KRAWSVDFSHADPTKLASGSDDGTVKLWSINQEAS--TGTIKTKAN---VCCVQFPS 562
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
+ L+ G AD K Y YD+R P+ + H K V+Y+RF+D T+V+A TD LKLW
Sbjct: 563 DSAHLLTFGSADYKIYCYDLRNTKGPLCILSSHNKAVSYVRFVDSSTIVSASTDNTLKLW 622
Query: 260 NVNDSRVIR----------TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
++ S+V+R TY GH N +NFVGLSV G + CGSETN VF Y
Sbjct: 623 DL--SKVMRNGNSSNACGLTYTGHTNEKNFVGLSV--SDGYIACGSETNAVFCYHKSLPM 678
Query: 310 PVWVHDF---EPVTAAGSER---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
P+ H F +PV+ +E FVSSVCWR + TL+A S G + V
Sbjct: 679 PLATHKFGSSDPVSGQENEDDGGQFVSSVCWRGKSQ---TLLAANSMGNIKVL 728
>gi|357137921|ref|XP_003570547.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Brachypodium
distachyon]
Length = 670
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 182/326 (55%), Gaps = 27/326 (8%)
Query: 36 SPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYIC 95
SPN S IEFD D +FAT G++++I+++ +V+ + V H V + +
Sbjct: 365 SPNIVSS-----IEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MA 413
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W S V+ S DY+G+V +D++ + + E +EH +R WSVD+S+ +P
Sbjct: 414 TRSKLSCLSWN-KYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTEP 471
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
+ SGSDD +++W + + + ++ +C V+++P S VA G AD +
Sbjct: 472 SMLVSGSDDCKVKVWCTKQEASAINIDM-----KANICSVKYNPGSSYYVAVGSADHNIH 526
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+D+R P+ +F GH+K V+Y++FL + L +A TD L+LW+V ++ +RT++GH N
Sbjct: 527 YFDLRNPSTPLHIFGGHKKAVSYVKFLSNNELASASTDSTLRLWDVKENCPVRTFRGHKN 586
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSS 331
+NFVGLSV + CGSETN+VFVY +P H F ++ F+S+
Sbjct: 587 EKNFVGLSV--SNDYIACGSETNEVFVYHKAISKPASSHRFVSSDVDDADDDPGTYFISA 644
Query: 332 VCWRRVGEDECTLVAGGSDGLLHVFV 357
VCW+ D T++ S G + V V
Sbjct: 645 VCWK---SDSPTMLTANSQGTIKVLV 667
>gi|449017032|dbj|BAM80434.1| photoregulatory zinc-finger protein COP1 [Cyanidioschyzon merolae
strain 10D]
Length = 855
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/353 (36%), Positives = 176/353 (49%), Gaps = 62/353 (17%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYIC---TPA 98
S+ + ++FD + A G+ RKI+I+++ +V VDH Y IC A
Sbjct: 524 SNIVSCLDFDMFGELLAAAGVMRKIKIFDLHTV---------VDHDAQVKYPICELPARA 574
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
KLS L W P T + S DYDGVV +D E + E +EH +R W+VDY P +
Sbjct: 575 KLSCLSWSPSTRQHI-ASSDYDGVVCIWDTESCKLVAEYEEHE-KRAWTVDYCPMKPHIL 632
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS-LVAAGCADKKAYAY 217
ASGSDDG +++W V T++ +A+ VCC++F P L+A G AD +AY Y
Sbjct: 633 ASGSDDGNVKIWS--TTQRDSVGTIRMNAN---VCCIKFAPLQHECLLAVGSADHQAYVY 687
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D+R M P+ + GHRK ++YIRF + +VTA TD L+LW++ + R Y GH N
Sbjct: 688 DLRSMAQPLHILKGHRKAISYIRFFCSNREIVTASTDSTLRLWDLRSCQCERIYTGHCNE 747
Query: 277 RNFVGLSV---WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVT----------- 320
RNFVGLSV W + CGSE N V+ Y P V DF EP
Sbjct: 748 RNFVGLSVKPDW-----IACGSEDNHVYTYYRSLTSPAIVSDFAAEPAQHSAEVVARSGG 802
Query: 321 ------AAGSE-----------RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
A GS FVS+V WR+ D TL A S GL+ +F
Sbjct: 803 ALDVAGAPGSRFLQPDSGTFGGPHFVSAVAWRK---DTDTLAAANSQGLIRIF 852
>gi|62859105|ref|NP_001016199.1| ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
[Xenopus (Silurana) tropicalis]
gi|89268128|emb|CAJ82063.1| ring finger and WD repeat domain 2 [Xenopus (Silurana) tropicalis]
gi|213624124|gb|AAI70678.1| ring finger and WD repeat domain 2 [Xenopus (Silurana) tropicalis]
Length = 684
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 178/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 374 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 427
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W VL S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 428 CISWS-SYHKNVLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 483
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 484 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 538
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F++ D +V+A TD LKLWNV+ +R++KGH+N +NF
Sbjct: 539 RNTKQPIMVFKGHRKAVSYAKFVNGDEIVSASTDSQLKLWNVSRPHCLRSFKGHINEKNF 598
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 599 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 656
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 657 CWRALPDGESNVLIAANSQGTIKVL 681
>gi|302769404|ref|XP_002968121.1| hypothetical protein SELMODRAFT_409247 [Selaginella moellendorffii]
gi|300163765|gb|EFJ30375.1| hypothetical protein SELMODRAFT_409247 [Selaginella moellendorffii]
Length = 499
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 202/376 (53%), Gaps = 38/376 (10%)
Query: 9 QPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRI 68
P+ E ++ W+F S + P+ SD I I++D + + ATGG+ARKIRI
Sbjct: 132 MPEPEPCDQSKHETWEFETLVPFSCET-PSLLSSDVISTIDYDETGQLIATGGLARKIRI 190
Query: 69 YNIKSVLVDHPVVAVVDHSKVCDYY--ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEY 126
+ + LV+ V + + IC PAKLSSLKW+PG+S V+ GDYDG V E+
Sbjct: 191 CSYQE-LVNGMGRECFQGRNVKNLFTTICMPAKLSSLKWRPGSS-EVIACGDYDGSVTEW 248
Query: 127 DLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPS 186
D+E V + ER EH GR VWS+DY + L AS S D T++ W + + V ++ S
Sbjct: 249 DVEHGVTVSERYEHTGRTVWSIDYCRDFRGLLASASSDSTVRFWSRNVE--RSVGIIK-S 305
Query: 187 ASRSAVCCVEFHPFGSS-----LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
R+++CCVE FG S VA CAD Y YD+R + PV GH ++V+Y+R+
Sbjct: 306 LKRNSMCCVE---FGRSSGPCCYVAVACADASVYLYDMRSLGSPVANLRGHERSVSYVRW 362
Query: 242 LDVDTLVTAGTDGCLKLWNV--------------NDSRVI-RTYKGHVNNRNFV----GL 282
L ++LV++ DG ++LW++ ND I RT+ H N RNFV
Sbjct: 363 LGENSLVSSSPDGTIRLWDIASTLTGTGESWHARNDELPIARTFGCHSNTRNFVGLSVAS 422
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGE-PVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
S GGL+ GSE N+VFVY E PV+ H F ++ FV SVCW + ED
Sbjct: 423 SGGGSGGLIASGSENNEVFVYSSSVSERPVFRHKFNDAVVL-DDKAFVGSVCWTK-QEDH 480
Query: 342 CTLVAGGSDGLLHVFV 357
+L++ S+G++ ++
Sbjct: 481 LSLISANSEGIVQEWL 496
>gi|171846427|gb|AAI61699.1| LOC100158422 protein [Xenopus laevis]
Length = 727
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 178/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 417 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 470
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 471 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 526
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 527 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 581
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F++ D +V+A TD LKLWNV+ +R++KGH+N +NF
Sbjct: 582 RNTKQPIMVFKGHRKAVSYAKFVNGDEIVSASTDSQLKLWNVSRPHCLRSFKGHINEKNF 641
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 642 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 699
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 700 CWRALPDGESNVLIAANSQGTIKVL 724
>gi|15219179|ref|NP_175717.1| SPA1-related 4 protein [Arabidopsis thaliana]
gi|30695417|ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana]
gi|75332075|sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4
gi|14532798|gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis
thaliana]
gi|22136946|gb|AAM91817.1| putative phytochrome A supressor spa1 protein [Arabidopsis
thaliana]
gi|332194767|gb|AEE32888.1| SPA1-related 4 protein [Arabidopsis thaliana]
gi|332194768|gb|AEE32889.1| SPA1-related 4 protein [Arabidopsis thaliana]
Length = 794
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 182/331 (54%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICT 96
S+ + I FD FAT G+ +KI+I+ +S++ D +PVV + SK
Sbjct: 484 SNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSK-------- 535
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W +V S +++GVV +D+ + + E EH +RVWS+DYS DP
Sbjct: 536 ---LSGICWNSYIKSQV-ASSNFEGVVQVWDVARNQLVTEMKEHE-KRVWSIDYSSADPT 590
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGSDDG++++W + G + T++ A+ +CCV+F +A G AD K Y
Sbjct: 591 LLASGSDDGSVKLWS--INQGVSIGTIKTKAN---ICCVQFPSETGRSLAFGSADHKVYY 645
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN------DSRVIRTY 270
YD+R P+ GH KTV+Y+RF+D TLV++ TD LKLW+++ + + ++
Sbjct: 646 YDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSF 705
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSERG 327
GH N +NFVGLSV G + GSETN+VFVY + PV + F +PV+ +
Sbjct: 706 MGHTNVKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDA 763
Query: 328 --FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SSVCWR G+ TLVA S G + +
Sbjct: 764 SQFISSVCWR--GQS-STLVAANSTGNIKIL 791
>gi|75335085|sp|Q9LJR3.1|SPA3_ARATH RecName: Full=Protein SPA1-RELATED 3
gi|9294263|dbj|BAB02165.1| photomorphogenesis repressor protein-like [Arabidopsis thaliana]
gi|330688323|gb|AEC32932.1| SPA3 isoform 1 [Arabidopsis thaliana]
Length = 845
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 182/331 (54%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICT 96
S+ + + FD +FAT G+ +KI+I+ S++ D +PVV + SK
Sbjct: 534 SNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSK-------- 585
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSSL W ++ S ++DGVV +D+ + + E EH +RVWS+D S DP
Sbjct: 586 ---LSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEHK-KRVWSIDISSADPT 640
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGSDDGT+++W + G + T++ A+ VCCV+F +A G AD K Y
Sbjct: 641 LLASGSDDGTVKLWS--INQGVSIGTIKTKAN---VCCVQFPSDSGRSLAFGSADHKVYY 695
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN------DSRVIRTY 270
YD+R P+ GH KTV+Y++F+D TLV++ TD LKLW+++ + + ++
Sbjct: 696 YDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSF 755
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV-TAAGSE---- 325
GH N +NFVGLSV G + GSETN+VFVY + PV + F + +G E
Sbjct: 756 TGHTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDA 813
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SS+CWR G+ TLVA S+G + +
Sbjct: 814 SQFISSICWR--GQS-STLVAANSNGNIKIL 841
>gi|242021289|ref|XP_002431077.1| RING finger and WD repeat domain protein, putative [Pediculus
humanus corporis]
gi|212516326|gb|EEB18339.1| RING finger and WD repeat domain protein, putative [Pediculus
humanus corporis]
Length = 642
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 178/321 (55%), Gaps = 29/321 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD + FA G+ + I+IY+ SV+ D +VD C + + +K+S +
Sbjct: 339 VSSIEFDKDNEFFAIAGVTKLIKIYDYGSVIRD-----MVDIHYPC-LEMTSTSKISCVS 392
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W G L S DY+G + +D+ ++ F+ E +R WSVD++ D L ASGS
Sbjct: 393 WNFYHKG-TLASSDYEGTITVWDVTTGQRTKTFQEHE---KRCWSVDFNNVDTRLIASGS 448
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++WD D +V +++ VCCV+F+P S +A G AD + YD+RKM
Sbjct: 449 DDARVKLWDLNNDH-----SVASLEAKANVCCVKFNPCSSYNLAFGSADHCVHYYDLRKM 503
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ + VF GHRK V+Y++FL+ + +V+A TD LK+WNVN S +R++ GH+N +NFVGL
Sbjct: 504 KEALSVFKGHRKAVSYVKFLNKEDIVSASTDSQLKMWNVNQSHCLRSFVGHINEKNFVGL 563
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG-------FVSSVCWR 335
+ G + CGSE N ++VY + ++ F+ V + + FVS+VCWR
Sbjct: 564 AT--DGDYVACGSENNSLYVYYKGVTKQLFNFKFDTVRSVLEKSSKEDDANEFVSAVCWR 621
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
+ +VA S G++ +
Sbjct: 622 QQSN---VVVAANSQGIIKIL 639
>gi|449446929|ref|XP_004141223.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus]
gi|449498653|ref|XP_004160596.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus]
Length = 850
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 186/330 (56%), Gaps = 38/330 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ RKI+++ S++ + +PVV + SK
Sbjct: 541 SNLVCSLSFDRDGEFFATAGVNRKIKVFGYDSIVNEDRDIHYPVVEMASRSK-------- 592
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSS+ W ++ S +++GVV +D+ + + E EH RRVWS+D+S DP
Sbjct: 593 ---LSSVCWNRYIKSQI-ASSNFEGVVQVWDVTRSQVVTEMGEHE-RRVWSIDFSSADPT 647
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASGSDDG++++W + G + T++ A+ VCCV+F +A G AD K Y
Sbjct: 648 ILASGSDDGSVKLWS--INQGISIGTIRTKAN---VCCVQFPVDSGRSLAFGSADHKIYY 702
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV--NDSRV----IRTY 270
YD+R + P+ F GH KTV+Y++++D TLV+A TD LKLW++ + SRV ++++
Sbjct: 703 YDMRNIRVPLCTFTGHNKTVSYVKYIDSSTLVSASTDNTLKLWDLSMSTSRVVDSPVQSF 762
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE--PVTAAGSERG- 327
GH+N +NFVGLSV G + GSETN+VFVY + P + F+ P+++ +
Sbjct: 763 TGHMNIKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPALSYKFQIDPLSSHEMDDSA 820
Query: 328 -FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SSVCWR +LVA S G + +
Sbjct: 821 QFISSVCWR---SQSSSLVAANSTGHIKIL 847
>gi|414880672|tpg|DAA57803.1| TPA: hypothetical protein ZEAMMB73_989456 [Zea mays]
Length = 438
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 182/331 (54%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----PVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+++ ++ +H PVV + + SK
Sbjct: 128 SNLVCSVGFDRDREFFATAGVNKKIKVFEYNMIVNEHRDIHYPVVEMSNRSK-------- 179
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W + S D++G+V +D+ + E EH RRVWSVD+S DP
Sbjct: 180 ---LSCISWNSYMKSHI-ASSDFEGIVQVWDVTRSQVFVEMREHE-RRVWSVDFSIVDPT 234
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
SGSDDG++++WD G + T++ +R+ VC V+F P + +A G AD K Y
Sbjct: 235 KLVSGSDDGSVKLWDMNQAGS--IGTIK---TRANVCSVQFQPDTARSIAIGSADHKIYC 289
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDS--RVI----RTY 270
YD+R + P GH KTV+Y+++LD T+V+A TD LKLW+++ S R+I +T+
Sbjct: 290 YDLRHIRAPYCTLVGHTKTVSYVKYLDASTIVSASTDNSLKLWDLSMSPGRIIDSPVQTF 349
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAA--GSE 325
KGH N +NFVGLS+ G + GSETN+VFVY + PV + F +P++ +
Sbjct: 350 KGHTNTKNFVGLSI--SDGYIATGSETNEVFVYHKEFPMPVLAYKFSVTDPISGQEIDDQ 407
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+S VCWR G+ TL++ S G + +
Sbjct: 408 SQFISCVCWR--GQSS-TLLSANSSGNIKIL 435
>gi|297847694|ref|XP_002891728.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337570|gb|EFH67987.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 786
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 180/331 (54%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICT 96
S+ + I FD FAT G+ +KI+I+ +S++ D +PVV + SK
Sbjct: 476 SNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSK-------- 527
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W +V S +++GVV +D + + E EH +RVWS+DYS DP
Sbjct: 528 ---LSGICWNSYIKSQV-ASSNFEGVVQVWDAARSQLVTEMKEHE-KRVWSIDYSSADPT 582
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGSDDG++++W + G + T++ A+ +CCV+F +A G AD K Y
Sbjct: 583 LLASGSDDGSVKLWS--INQGVSIGTIKTKAN---ICCVQFPSESGRSLAFGSADHKVYY 637
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN------DSRVIRTY 270
YD+R P+ GH KTV+Y+RF+D TLV++ TD LKLW+++ + + ++
Sbjct: 638 YDLRNPKLPLCTMIGHNKTVSYVRFMDSSTLVSSSTDNTLKLWDLSMSISGVNETPLHSF 697
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVT--AAGSE 325
GH N +NFVGLSV G + GSETN+VFVY + PV + F +PV+
Sbjct: 698 MGHTNVKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSDLEVDDA 755
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SSVCWR G+ TLVA S G + +
Sbjct: 756 SQFISSVCWR--GQ-SSTLVAANSTGNIKIL 783
>gi|344240054|gb|EGV96157.1| E3 ubiquitin-protein ligase RFWD2 [Cricetulus griseus]
Length = 556
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 246 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 299
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 300 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 355
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 356 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 410
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 411 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 470
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 471 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 528
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 529 CWRALSDGESNVLIAANSQGTIKVL 553
>gi|387019679|gb|AFJ51957.1| e3 ubiquitin-protein ligase RFWD2-like [Crotalus adamanteus]
Length = 709
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 399 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 452
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 453 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 508
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 509 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 563
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 564 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF 623
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 624 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 681
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 682 CWRALPDGESNVLIAANSQGTIKVL 706
>gi|359485383|ref|XP_002274192.2| PREDICTED: protein SPA1-RELATED 3 [Vitis vinifera]
Length = 906
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 186/338 (55%), Gaps = 44/338 (13%)
Query: 35 SSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKV 89
+SPN S + FD FAT G+ +KI+I+ +L + +PV + SK
Sbjct: 594 NSPNLVCS-----LSFDRDREFFATAGVNKKIKIFECDMILNENRDIHYPVTEMASQSK- 647
Query: 90 CDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD 149
LS + W +++ S D++GVV +D+ + E EH +RVWSVD
Sbjct: 648 ----------LSCICWNGYIKNQIVSS-DFEGVVQVWDVSRSQRFMEMKEHE-KRVWSVD 695
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
+S DP ASG DDG +++W+ + G + T++ A+ VCCV+F P + +A G
Sbjct: 696 FSLADPTKLASGGDDGAVKLWN--INQGGSIGTIKTKAN---VCCVQFPPDSARSLAIGS 750
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--DSRV- 266
AD K Y YD+R P+ +GH KTV+Y++F++ TLV+A TD LKLW+++ SRV
Sbjct: 751 ADHKVYCYDLRNTRIPLATLNGHSKTVSYVKFINSTTLVSASTDSSLKLWDLSTCTSRVL 810
Query: 267 ---IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVT 320
++T+ GH+N +NFVGLS+ G + GSETN+VF+Y + PV F +P++
Sbjct: 811 DSPLQTFTGHMNVKNFVGLSI--SDGYIATGSETNEVFIYHKAFPMPVLSFKFSTMDPLS 868
Query: 321 AAGSERG--FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ G FVS+VCWR G+ TL+A S G + +
Sbjct: 869 GQNVDDGQQFVSTVCWR--GQS-TTLLAANSAGHIKLL 903
>gi|355746208|gb|EHH50833.1| hypothetical protein EGM_01718, partial [Macaca fascicularis]
Length = 625
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 176/324 (54%), Gaps = 27/324 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 315 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 368
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 369 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 424
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D S+V + +++ VCCV+F P +A GCAD + YD+
Sbjct: 425 SGSDDAKVKLWYTNLD-----SSVASTEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDL 479
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 480 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 539
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 540 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 597
Query: 333 CWRRVGEDECT-LVAGGSDGLLHV 355
CWR + + E L+A S G + V
Sbjct: 598 CWRALPDGESNVLIAANSQGTIKV 621
>gi|354477523|ref|XP_003500969.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Cricetulus
griseus]
Length = 812
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 502 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 555
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 556 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 611
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 612 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 666
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 667 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 726
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 727 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 784
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 785 CWRALSDGESNVLIAANSQGTIKVL 809
>gi|187957396|gb|AAI58003.1| Ring finger and WD repeat domain 2 [Mus musculus]
Length = 733
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 423 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 476
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 477 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 532
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 533 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 587
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 588 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 647
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 648 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 705
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 706 CWRALSDGESNVLIAANSQGTIKVL 730
>gi|345325443|ref|XP_001515470.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Ornithorhynchus
anatinus]
Length = 756
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 446 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 499
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 500 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 555
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 556 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 610
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 611 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF 670
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 671 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 728
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 729 CWRALPDGESNVLIAANSQGTIKVL 753
>gi|26024211|ref|NP_036061.1| E3 ubiquitin-protein ligase RFWD2 [Mus musculus]
gi|55976616|sp|Q9R1A8.2|RFWD2_MOUSE RecName: Full=E3 ubiquitin-protein ligase RFWD2; AltName:
Full=Constitutive photomorphogenesis protein 1 homolog;
Short=mCOP1; AltName: Full=RING finger and WD repeat
domain protein 2
gi|20800468|gb|AAD51094.2| constitutive photomorphogenic protein [Mus musculus]
gi|52350654|gb|AAH82804.1| Ring finger and WD repeat domain 2 [Mus musculus]
gi|148707402|gb|EDL39349.1| ring finger and WD repeat domain 2 [Mus musculus]
Length = 733
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 423 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 476
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 477 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 532
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 533 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 587
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 588 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 647
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 648 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 705
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 706 CWRALSDGESNVLIAANSQGTIKVL 730
>gi|68341963|ref|NP_001020297.1| ring finger and WD repeat domain 2 [Rattus norvegicus]
gi|60551479|gb|AAH91284.1| Ring finger and WD repeat domain 2 [Rattus norvegicus]
Length = 433
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 175/322 (54%), Gaps = 27/322 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S +
Sbjct: 126 VSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKISCIS 179
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 180 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 235
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 236 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 290
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL
Sbjct: 291 KQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGL 350
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSVCWR 335
+ +G + CGSE N +++Y + + F+ V + + FVS+VCWR
Sbjct: 351 A--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR 408
Query: 336 RVGEDECT-LVAGGSDGLLHVF 356
+ + E L+A S G + V
Sbjct: 409 ALSDGESNVLIAANSQGTIKVL 430
>gi|395530861|ref|XP_003767505.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Sarcophilus
harrisii]
Length = 460
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 150 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 203
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 204 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 259
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 260 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 314
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 315 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF 374
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 375 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 432
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 433 CWRALPDGESNVLIAANSQGTIKVL 457
>gi|149058294|gb|EDM09451.1| similar to constitutive photomorphogenic protein 1, isoform CRA_b
[Rattus norvegicus]
Length = 733
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 423 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 476
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 477 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 532
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 533 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 587
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 588 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 647
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 648 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 705
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 706 CWRALSDGESNVLIAANSQGTIKVL 730
>gi|338724555|ref|XP_001493699.3| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Equus caballus]
Length = 570
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 260 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 313
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 314 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 369
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 370 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 424
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 425 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 484
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 485 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 542
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 543 CWRALPDGESNVLIAANSQGTIKVL 567
>gi|119611408|gb|EAW91002.1| ring finger and WD repeat domain 2, isoform CRA_d [Homo sapiens]
Length = 530
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 220 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 273
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 274 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 329
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 330 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 384
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 385 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 444
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 445 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 502
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 503 CWRALPDGESNVLIAANSQGTIKVL 527
>gi|242054261|ref|XP_002456276.1| hypothetical protein SORBIDRAFT_03g033340 [Sorghum bicolor]
gi|241928251|gb|EES01396.1| hypothetical protein SORBIDRAFT_03g033340 [Sorghum bicolor]
Length = 783
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 181/331 (54%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----PVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI++++ ++ +H PVV + + SK
Sbjct: 473 SNLVCSVGFDRDREFFATAGVNKKIKVFDYNMIVNEHRDIHYPVVEMSNRSK-------- 524
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W + S D++G+V +D+ + E EH RRVWSVD+S DP
Sbjct: 525 ---LSCICWNSYMKSHI-ASSDFEGIVQVWDVTRSQVFVEMREHE-RRVWSVDFSIVDPT 579
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
SGSDDG++++WD G + T++ +R+ VC V+F P S +A G AD K Y
Sbjct: 580 KLVSGSDDGSVKLWDMNQAGS--IGTIR---TRANVCSVQFQPDTSRSIAIGSADHKIYC 634
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR------VIRTY 270
YD+R + P GH KTV+Y+++LD T+V+A TD LKLW+++ SR I+T+
Sbjct: 635 YDLRNIRAPYCTLVGHTKTVSYVKYLDASTIVSASTDNSLKLWDLSMSRGRIIDSPIQTF 694
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAA--GSE 325
GH N +NFVGLS+ G + GSETN+VFVY + PV + F +P++ +
Sbjct: 695 TGHTNTKNFVGLSI--SDGYIATGSETNEVFVYHKEFPMPVLAYKFSVTDPISGQEIDDQ 752
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+S VCWR G+ TL++ S G + +
Sbjct: 753 SQFISCVCWR--GQSS-TLLSANSSGNIKIL 780
>gi|169158558|emb|CAQ15481.1| novel protein similar to vertebrate ring finger and WD repeat
domain 2 (RFWD2, zgc:163067) [Danio rerio]
Length = 694
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 177/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI+++ +V+ D + + C+ +K+S
Sbjct: 384 SSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCN------SKIS 437
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 438 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 493
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 494 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPTSRYHLAFGCADHCVHYYDL 548
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F++ + +V+A TD LKLWNVN +R++KGH+N +NF
Sbjct: 549 RNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGHINEKNF 608
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 609 VGLA--SNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAV 666
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 667 CWRALPDGESNVLIAANSQGTIKVL 691
>gi|403266440|ref|XP_003925391.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Saimiri boliviensis
boliviensis]
Length = 564
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 254 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 307
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 308 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 363
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 364 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 418
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 419 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 478
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 479 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 536
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 537 CWRALPDGESNVLIAANSQGTIKVL 561
>gi|426239933|ref|XP_004013871.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Ovis aries]
Length = 564
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 254 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 307
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 308 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 363
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 364 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 418
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 419 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 478
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 479 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 536
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 537 CWRALPDGESNVLIAANSQGTIKVL 561
>gi|380798359|gb|AFE71055.1| E3 ubiquitin-protein ligase RFWD2 isoform a, partial [Macaca
mulatta]
Length = 531
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 175/322 (54%), Gaps = 27/322 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S +
Sbjct: 224 VSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKISCIS 277
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 278 W-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 333
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 334 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 388
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL
Sbjct: 389 KQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGL 448
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSVCWR 335
+ +G + CGSE N +++Y + + F+ V + + FVS+VCWR
Sbjct: 449 A--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR 506
Query: 336 RVGEDECT-LVAGGSDGLLHVF 356
+ + E L+A S G + V
Sbjct: 507 ALPDGESNVLIAANSQGTIKVL 528
>gi|410985932|ref|XP_003999269.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Felis catus]
Length = 570
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 260 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 313
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 314 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 369
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 370 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 424
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 425 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 484
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 485 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 542
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 543 CWRALPDGESNVLIAANSQGTIKVL 567
>gi|326924742|ref|XP_003208584.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Meleagris
gallopavo]
Length = 696
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 386 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 439
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 440 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 495
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 496 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 550
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 551 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF 610
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 611 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 668
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 669 CWRALPDGESNVLIAANSQGTIKVL 693
>gi|356542282|ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
Length = 892
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 183/331 (55%), Gaps = 38/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+++ S++ + +PVV + SK
Sbjct: 581 SNLVCSLSFDRDGEFFATAGVNKKIKVFECDSIINEDRDIHYPVVEMASRSK-------- 632
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSS+ W ++ S +++GVV +D+ + I E EH RRVWS+D+S DP
Sbjct: 633 ---LSSICWNTYIKSQI-ASSNFEGVVQLWDVTRSQVISEMREHE-RRVWSIDFSSADPT 687
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASGSDDG++++W + G V T++ A+ VCCV+F + +A G AD + Y
Sbjct: 688 MLASGSDDGSVKLWS--INQGVSVGTIKTKAN---VCCVQFPLDSARFLAFGSADHRIYY 742
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND--SRV----IRTY 270
YD+R + P+ GH KTV+YI+F+D LV+A TD LKLW+++ SRV I+++
Sbjct: 743 YDLRNLKMPLCTLVGHNKTVSYIKFVDTVNLVSASTDNTLKLWDLSTCASRVIDSPIQSF 802
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE---PVTAAGSERG 327
GH N +NFVGLSV G + GSETN+VF+Y + P F+ P++ +
Sbjct: 803 TGHANVKNFVGLSV--SDGYIATGSETNEVFIYHKAFPMPALSFKFQNTDPLSGNEVDDA 860
Query: 328 --FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVSSVCW G+ TL+A S G + +
Sbjct: 861 VQFVSSVCWH--GQSSSTLLAANSTGNVKIL 889
>gi|383210359|dbj|BAM08276.1| constitutive photomorphogenic 1 [Malus x domestica]
Length = 646
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 177/317 (55%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD + +FAT G++R I+++ SV V+ P H + + I + +KLS L
Sbjct: 345 VSSIEFDRDEELFATAGVSRCIKVFEFSSV-VNEPTDI---HCPIVE--ISSRSKLSCLS 398
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T + S DY+GVV +D+ + E +EH +R WSVD+S DP + SGSDD
Sbjct: 399 WNKYTRNHI-ASSDYEGVVTVWDVNTCQSMMEYEEHE-KRAWSVDFSCTDPSMLVSGSDD 456
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W K ++V ++ +C V+++P S VA G AD + YD+R +
Sbjct: 457 CKVKIW-----CTKQEASVLNIDMKANICSVKYNPGSSFFVAVGSADHHIHYYDLRNISQ 511
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GHRK V+Y++FL + L +A TD L+LW+V ++ + Y+GH+N +NFVGL+V
Sbjct: 512 PLHVFRGHRKAVSYVKFLSNNELASASTDSTLRLWDVKENLPLCMYRGHMNEKNFVGLAV 571
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN++FVY +P+ H F ++ F+S+VCW+R D
Sbjct: 572 --NNEYIACGSETNELFVYHKAISKPMTWHRFGSSDLGDNDDDPGPYFISAVCWKR---D 626
Query: 341 ECTLVAGGSDGLLHVFV 357
++ S G + V V
Sbjct: 627 SPMILTANSQGTIKVLV 643
>gi|395825001|ref|XP_003785734.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Otolemur
garnettii]
Length = 735
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 425 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 478
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 479 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 534
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 535 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 589
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 590 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 649
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 650 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 707
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 708 CWRALPDGESNVLIAANSQGTIKVL 732
>gi|348531414|ref|XP_003453204.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Oreochromis
niloticus]
Length = 716
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 177/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI+++ +V+ D + + C+ +K+S
Sbjct: 406 SSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCN------SKIS 459
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 460 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 515
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 516 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPTSRYHLAFGCADHCVHYYDL 570
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F++ + +V+A TD LKLWNVN +R++KGH+N +NF
Sbjct: 571 RNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGHINEKNF 630
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 631 VGLA--SNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAV 688
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 689 CWRALPDGESNVLIAANSQGTIKVL 713
>gi|432914419|ref|XP_004079103.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Oryzias latipes]
Length = 705
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 177/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI+++ +V+ D + + C+ +K+S
Sbjct: 395 SSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCN------SKIS 448
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 449 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 504
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 505 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPTSRYHLAFGCADHCVHYYDL 559
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F++ + +V+A TD LKLWNVN +R++KGH+N +NF
Sbjct: 560 RNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGHINEKNF 619
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 620 VGLA--SNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAV 677
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 678 CWRALPDGESNVLIAANSQGTIKVL 702
>gi|157074030|ref|NP_001096726.1| E3 ubiquitin-protein ligase RFWD2 [Bos taurus]
gi|126010815|gb|AAI33613.1| RFWD2 protein [Bos taurus]
Length = 735
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 425 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 478
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 479 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 534
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 535 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 589
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 590 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 649
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 650 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 707
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 708 CWRALPDGESNVLIAANSQGTIKVL 732
>gi|10438410|dbj|BAB15239.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 196 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 249
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 250 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 305
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 306 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 360
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 361 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 420
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 421 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 478
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 479 CWRALPDGESNVLIAANSQGTIKVL 503
>gi|395825003|ref|XP_003785735.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Otolemur
garnettii]
Length = 711
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 401 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 454
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 455 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 510
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 511 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 565
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 566 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 625
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 626 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 683
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 684 CWRALPDGESNVLIAANSQGTIKVL 708
>gi|327270275|ref|XP_003219915.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Anolis
carolinensis]
Length = 719
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 409 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 462
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 463 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 518
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 519 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 573
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 574 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF 633
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 634 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 691
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 692 CWRALPDGESNVLIAANSQGTIKVL 716
>gi|449509373|ref|XP_002192026.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Taeniopygia guttata]
Length = 671
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 361 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 414
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 415 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 470
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 471 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 525
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 526 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF 585
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 586 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 643
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 644 CWRALPDGESNVLIAANSQGTIKVL 668
>gi|73961335|ref|XP_537181.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Canis lupus
familiaris]
Length = 733
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 423 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 476
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 477 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 532
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 533 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 587
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 588 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 647
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 648 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 705
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 706 CWRALPDGESNVLIAANSQGTIKVL 730
>gi|170033008|ref|XP_001844371.1| E3 ubiquitin-ligase protein COP1 [Culex quinquefasciatus]
gi|167873485|gb|EDS36868.1| E3 ubiquitin-ligase protein COP1 [Culex quinquefasciatus]
Length = 685
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 183/325 (56%), Gaps = 26/325 (8%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
VS + IEFD FA G+ ++I+I++ S + D A VD + + +C +K+
Sbjct: 375 VSTIVSSIEFDKDSEYFAIAGVTKRIKIFDYYSAIRD----ASVDINYPINEMVCN-SKI 429
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S + W +L S DY+G+V +D+ K +EH +R W VD+++ D L AS
Sbjct: 430 SCVIWN-NYFKEILASSDYEGIVSVWDVSTKTRTKAFEEHD-KRCWCVDFNEVDTRLLAS 487
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDD +++W D V+T++ +R+ VCCV+F+P S +A G AD + YD+R
Sbjct: 488 GSDDARVKLWSLNVDHS--VATIE---ARANVCCVKFNPKSSCHLAFGSADHCVHYYDLR 542
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND-SRVIRTYKGHVNNRNF 279
+ +P+ VF GH+K V+Y++FL+ +V+AGTDG LKLWN+N +R++ GH+N +NF
Sbjct: 543 NIKEPLCVFRGHKKAVSYVKFLNTTEIVSAGTDGQLKLWNINSPPYCLRSFTGHINEKNF 602
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA---AGSERG-----FVSS 331
GL+ + L CGSE N + VY + ++ F + + +ER FVS+
Sbjct: 603 AGLAT--NNDYLACGSEDNSLCVYYKGLSKQLFNLKFSNNSTRSISDTERSSEGNDFVSA 660
Query: 332 VCWRRVGEDECTLVAGGSDGLLHVF 356
VCWR+ ++AG S+G++ +
Sbjct: 661 VCWRKQSN---IIIAGNSEGIIKIL 682
>gi|355559061|gb|EHH15841.1| hypothetical protein EGK_01992, partial [Macaca mulatta]
Length = 620
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 176/324 (54%), Gaps = 27/324 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 310 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 363
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 364 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 419
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 420 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 474
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 475 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 534
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 535 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 592
Query: 333 CWRRVGEDECT-LVAGGSDGLLHV 355
CWR + + E L+A S G + V
Sbjct: 593 CWRALPDGESNVLIAANSQGTIKV 616
>gi|297662665|ref|XP_002809816.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Pongo
abelii]
Length = 731
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 421 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 474
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 475 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 530
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 531 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 585
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 586 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 645
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 646 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 703
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 704 CWRALPDGESNVLIAANSQGTIKVL 728
>gi|301770741|ref|XP_002920790.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Ailuropoda
melanoleuca]
Length = 722
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 412 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 465
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 466 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 521
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 522 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 576
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 577 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 636
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 637 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 694
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 695 CWRALPDGESNVLIAANSQGTIKVL 719
>gi|356546870|ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
Length = 892
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 184/331 (55%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+++ S++ + +PVV + SK
Sbjct: 582 SNLVCSLSFDRDGEFFATAGVNKKIKVFECDSIINEDRDIHYPVVEMASRSK-------- 633
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSS+ W ++ S +++GVV +D+ + I E EH RRVWS+D+S DP
Sbjct: 634 ---LSSICWNTYIKSQI-ASSNFEGVVQLWDVTRSQVISEMREHE-RRVWSIDFSSADPT 688
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASGSDDG++++W + G V T++ A+ VCCV+F + +A G AD + Y
Sbjct: 689 MLASGSDDGSVKLWS--INQGVSVGTIKTKAN---VCCVQFPLDSARFLAFGSADHRIYY 743
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND--SRV----IRTY 270
YD+R + P+ GH KTV+YI+F+D LV+A TD LKLW+++ SRV I+++
Sbjct: 744 YDLRNLKMPLCTLVGHNKTVSYIKFVDTVNLVSASTDNTLKLWDLSTCASRVIDSPIQSF 803
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV-TAAGSE---- 325
GH N +NFVGLSV G + GSETN+VF+Y + P F+ +G+E
Sbjct: 804 TGHANVKNFVGLSV--SDGYIATGSETNEVFIYHKAFSMPALSFKFQNTDPLSGNEVDDA 861
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVSSVCWR G+ TL+A S G + +
Sbjct: 862 AQFVSSVCWR--GQSS-TLLAANSTGNVKIL 889
>gi|296478996|tpg|DAA21111.1| TPA: ring finger and WD repeat domain 2 [Bos taurus]
Length = 735
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 425 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 478
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 479 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 534
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 535 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 589
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 590 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 649
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 650 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 707
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 708 CWRALPDGESNVLIAANSQGTIKVL 732
>gi|410223720|gb|JAA09079.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410259874|gb|JAA17903.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410301284|gb|JAA29242.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410339121|gb|JAA38507.1| ring finger and WD repeat domain 2 [Pan troglodytes]
Length = 727
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 417 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 470
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 471 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 526
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 527 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 581
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 582 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 641
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 642 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 699
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 700 CWRALPDGESNVLIAANSQGTIKVL 724
>gi|21359963|ref|NP_071902.2| E3 ubiquitin-protein ligase RFWD2 isoform a [Homo sapiens]
gi|114568088|ref|XP_514018.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Pan
troglodytes]
gi|55976539|sp|Q8NHY2.1|RFWD2_HUMAN RecName: Full=E3 ubiquitin-protein ligase RFWD2; AltName:
Full=Constitutive photomorphogenesis protein 1 homolog;
Short=hCOP1; AltName: Full=RING finger and WD repeat
domain protein 2; AltName: Full=RING finger protein 200
gi|21105537|gb|AAM34692.1|AF508940_1 constitutive photomorphogenic protein [Homo sapiens]
gi|28394261|tpg|DAA01050.1| TPA_exp: RING finger protein COP1 [Homo sapiens]
gi|33327265|gb|AAQ08989.1| putative ubiquitin ligase COP1 [Homo sapiens]
gi|63102253|gb|AAH94728.1| Ring finger and WD repeat domain 2 [Homo sapiens]
gi|119611406|gb|EAW91000.1| ring finger and WD repeat domain 2, isoform CRA_b [Homo sapiens]
gi|189054516|dbj|BAG37289.1| unnamed protein product [Homo sapiens]
gi|410223718|gb|JAA09078.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410259872|gb|JAA17902.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410301282|gb|JAA29241.1| ring finger and WD repeat domain 2 [Pan troglodytes]
gi|410339119|gb|JAA38506.1| ring finger and WD repeat domain 2 [Pan troglodytes]
Length = 731
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 421 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 474
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 475 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 530
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 531 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 585
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 586 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 645
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 646 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 703
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 704 CWRALPDGESNVLIAANSQGTIKVL 728
>gi|395729376|ref|XP_003775537.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Pongo
abelii]
Length = 707
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 397 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 450
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 451 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 506
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 507 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 561
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 562 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 621
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 622 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 679
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 680 CWRALPDGESNVLIAANSQGTIKVL 704
>gi|390477079|ref|XP_003735239.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Callithrix
jacchus]
Length = 707
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 397 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 450
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 451 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 506
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 507 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 561
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 562 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 621
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 622 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 679
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 680 CWRALPDGESNVLIAANSQGTIKVL 704
>gi|351706098|gb|EHB09017.1| E3 ubiquitin-protein ligase RFWD2 [Heterocephalus glaber]
Length = 734
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 177/326 (54%), Gaps = 27/326 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 407 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 460
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 461 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 516
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 517 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 571
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 572 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 631
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 632 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 689
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVFV 357
CWR + + E L+A S G + + V
Sbjct: 690 CWRALPDGESNVLIAANSQGTIKLAV 715
>gi|50233824|ref|NP_001001740.1| E3 ubiquitin-protein ligase RFWD2 isoform d24 [Homo sapiens]
gi|332811252|ref|XP_001153038.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Pan
troglodytes]
gi|46241158|gb|AAS82851.1| constitutive photomorphogenic protein isoform d24 [Homo sapiens]
Length = 707
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 397 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 450
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 451 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 506
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 507 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 561
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 562 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 621
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 622 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 679
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 680 CWRALPDGESNVLIAANSQGTIKVL 704
>gi|296229716|ref|XP_002760382.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Callithrix
jacchus]
Length = 731
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 421 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 474
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 475 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 530
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 531 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 585
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 586 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 645
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 646 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 703
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 704 CWRALPDGESNVLIAANSQGTIKVL 728
>gi|383209880|dbj|BAM08275.1| constitutive photomorphogenic 1 [Malus x domestica]
Length = 646
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 176/317 (55%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD + +FAT G++R I+++ SV V+ P H + + I + +KLS L
Sbjct: 345 VSSIEFDRDEELFATAGVSRCIKVFEFSSV-VNEPTDI---HCPIVE--ISSRSKLSCLS 398
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T + S DY+GVV +D+ + E +EH +R WSVD+S DP + SGSDD
Sbjct: 399 WNKYTRNHI-ASSDYEGVVTVWDVNTCQSMMEYEEHE-KRAWSVDFSCTDPSMLVSGSDD 456
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W K +V ++ +C V+++P S VA G AD + YD+R +
Sbjct: 457 CKVKIW-----CTKQEPSVLNIDMKANICSVKYNPGSSFFVAVGSADHHIHYYDLRNISQ 511
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ VF GHRK V+Y++FL + L +A TD L+LW+V ++ + Y+GH+N +NFVGL+V
Sbjct: 512 PLHVFRGHRKAVSYVKFLSNNELASASTDSTLRLWDVKENLPLCMYRGHMNEKNFVGLAV 571
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN++FVY +P+ H F ++ F+S+VCW+R D
Sbjct: 572 --NNEYIACGSETNELFVYHKAISKPMTWHRFGSSDLGDNDDDPGPHFISAVCWKR---D 626
Query: 341 ECTLVAGGSDGLLHVFV 357
++ S G + V V
Sbjct: 627 SPMILTANSQGTIKVLV 643
>gi|388452804|ref|NP_001253194.1| E3 ubiquitin-protein ligase RFWD2 [Macaca mulatta]
gi|402858319|ref|XP_003893659.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Papio
anubis]
gi|383420755|gb|AFH33591.1| E3 ubiquitin-protein ligase RFWD2 isoform a [Macaca mulatta]
Length = 731
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 421 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 474
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 475 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 530
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 531 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 585
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 586 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 645
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 646 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 703
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 704 CWRALPDGESNVLIAANSQGTIKVL 728
>gi|383420753|gb|AFH33590.1| E3 ubiquitin-protein ligase RFWD2 isoform a [Macaca mulatta]
Length = 727
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 417 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 470
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 471 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 526
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 527 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 581
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 582 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 641
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 642 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 699
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 700 CWRALPDGESNVLIAANSQGTIKVL 724
>gi|397508595|ref|XP_003846253.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RFWD2
[Pan paniscus]
Length = 749
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 439 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 492
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 493 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 548
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 549 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 603
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 604 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINXKNF 663
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 664 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 721
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 722 CWRALPDGESNVLIAANSQGTIKVL 746
>gi|383420751|gb|AFH33589.1| E3 ubiquitin-protein ligase RFWD2 isoform a [Macaca mulatta]
Length = 711
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 401 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 454
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 455 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 510
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 511 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 565
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 566 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 625
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 626 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 683
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 684 CWRALPDGESNVLIAANSQGTIKVL 708
>gi|355716213|gb|AES05541.1| ring finger and WD repeat domain 2 [Mustela putorius furo]
Length = 577
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 175/325 (53%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 267 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 320
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 321 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 376
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 377 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 431
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWN +R++KGH+N +NF
Sbjct: 432 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNAGKPYCLRSFKGHINEKNF 491
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 492 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 549
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 550 CWRALPDGESNVLIAANSQGTIKVL 574
>gi|119611405|gb|EAW90999.1| ring finger and WD repeat domain 2, isoform CRA_a [Homo sapiens]
Length = 770
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 176/324 (54%), Gaps = 27/324 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 460 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 513
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 514 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 569
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 570 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 624
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 625 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 684
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 685 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 742
Query: 333 CWRRVGEDECT-LVAGGSDGLLHV 355
CWR + + E L+A S G + V
Sbjct: 743 CWRALPDGESNVLIAANSQGTIKV 766
>gi|402858321|ref|XP_003893660.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Papio
anubis]
Length = 707
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 397 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 450
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 451 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 506
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 507 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 561
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 562 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 621
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 622 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 679
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 680 CWRALPDGESNVLIAANSQGTIKVL 704
>gi|427785535|gb|JAA58219.1| Putative e3 ubiquitin-ligase protein [Rhipicephalus pulchellus]
Length = 626
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 176/321 (54%), Gaps = 29/321 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD + FA G+ +KI+++ +V+ D +VD + +C +K+S +
Sbjct: 323 VSSIEFDKDNEFFAIAGVTKKIKVFEYGTVIQD-----IVDIHYPVNEMMCN-SKISCIS 376
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W G +L S DY+G V +D +KV +++ E +R WSVD++K D + ASGS
Sbjct: 377 WSSYHKG-MLASSDYEGTVTIWDAFTGQKVKMYQEHE---KRCWSVDFNKVDTKIIASGS 432
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W CD +V +++ VCCV+F+P +A G AD + YD+R +
Sbjct: 433 DDAKVKLWSLSCD-----HSVTSLEAKANVCCVKFNPESRYHLALGSADHCVHYYDLRSV 487
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P+ VF GH+K V+Y++FL+ LV+A TD LKLWN+++ +R++KGH+N +NFVGL
Sbjct: 488 KQPLGVFKGHKKAVSYVKFLNTTELVSASTDSQLKLWNISNPHCLRSFKGHLNEKNFVGL 547
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV-------TAAGSERGFVSSVCWR 335
+ G + CGSE N +++Y + V F+ V FVS+VCW
Sbjct: 548 AT--DGDYVACGSENNALYIYYKGLSKQVLTFRFDVVRNILEKDKKEEDSNEFVSAVCW- 604
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
R+G +VA S G + V
Sbjct: 605 RMGSS--VVVAANSQGTIKVL 623
>gi|410924241|ref|XP_003975590.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Takifugu
rubripes]
Length = 703
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 175/325 (53%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI+++ +V+ D + + C+ +K+S
Sbjct: 393 SSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCN------SKIS 446
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D +K +++ E +R WSVD++ DP L A
Sbjct: 447 CISWS-SYHKNLLASSDYEGTVILWDGFTGQKSKVYQEHE---KRCWSVDFNLMDPKLLA 502
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 503 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPTSRYHLAFGCADHCVHYYDL 557
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 558 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF 617
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 618 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAV 675
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 676 CWRALPDGESNVLIAANSQGTIKVL 700
>gi|449452259|ref|XP_004143877.1| PREDICTED: protein SPA1-RELATED 2-like [Cucumis sativus]
gi|449501807|ref|XP_004161464.1| PREDICTED: protein SPA1-RELATED 2-like [Cucumis sativus]
Length = 1036
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 176/334 (52%), Gaps = 42/334 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICT 96
S+ I + FD + FA G+++KIRI+ SV D +P V + + SK
Sbjct: 723 SNVICSLSFDRDEEYFAAAGVSKKIRIFEFNSVFSDSVDIHYPAVEMFNRSK-------- 774
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W G L S DYDGVV +D + + +EH +R WSVD+S+ P
Sbjct: 775 ---LSCICWN-GYIKNYLASTDYDGVVKLWDATVGQEVSQFNEHN-KRAWSVDFSQVHPT 829
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
ASGSDD ++++W + C+ T++ A+ VCCV+F + L+A G AD + Y
Sbjct: 830 KLASGSDDCSVKLWS--INEKNCLGTIRNIAN---VCCVQFSAHSTHLLAFGSADYRTYC 884
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVI--------R 268
+D+R P V GH K V+Y++FLD TLV+A TD LKLW++N +
Sbjct: 885 FDLRNTKAPWCVLGGHEKAVSYVKFLDSGTLVSASTDNTLKLWDLNKTNPTGLSTKACSL 944
Query: 269 TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSE 325
T+ GH N +NFVGLSV G + CGSETN+V+ Y P+ + F +P++ +E
Sbjct: 945 TFSGHTNEKNFVGLSV--SNGYIACGSETNEVYAYHRSLPMPMTSYKFGSIDPISGKETE 1002
Query: 326 R---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVSSVCWR + T++A S G + V
Sbjct: 1003 DDNGQFVSSVCWRGKSD---TVIAANSSGCIKVL 1033
>gi|148235253|ref|NP_001083011.1| E3 ubiquitin-protein ligase RFWD2 [Danio rerio]
gi|141796336|gb|AAI39709.1| Zgc:163067 protein [Danio rerio]
Length = 694
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI+++ +V+ D + + C+ +K+S
Sbjct: 384 SSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCN------SKIS 437
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 438 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 493
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 494 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPTSRYHLAFGCADHCVHYYDL 548
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F++ +V+A TD LKLWNVN +R++KGH+N +NF
Sbjct: 549 RNAKQPIMVFKGHRKAVSYAKFVNGGEIVSASTDSQLKLWNVNKPHCLRSFKGHINEKNF 608
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 609 VGLA--SNGDYVACGSENNSLYLYCKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAV 666
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 667 CWRALPDGESNVLIAANSQGTIKVL 691
>gi|332219663|ref|XP_003258975.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 1 [Nomascus
leucogenys]
Length = 731
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 421 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 474
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 475 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 530
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W + V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 531 SGSDDAKVKLWSTNLNNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 585
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 586 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 645
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 646 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 703
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 704 CWRALPDGESNVLIAANSQGTIKVL 728
>gi|332219665|ref|XP_003258976.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 isoform 2 [Nomascus
leucogenys]
Length = 707
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 397 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 450
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 451 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 506
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W + V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 507 SGSDDAKVKLWSTNLNNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 561
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 562 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 621
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 622 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 679
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 680 CWRALPDGESNVLIAANSQGTIKVL 704
>gi|242091417|ref|XP_002441541.1| hypothetical protein SORBIDRAFT_09g029030 [Sorghum bicolor]
gi|241946826|gb|EES19971.1| hypothetical protein SORBIDRAFT_09g029030 [Sorghum bicolor]
Length = 1128
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 177/341 (51%), Gaps = 45/341 (13%)
Query: 38 NAAVSDSIGVI---EFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKV 89
NA + +S VI FD + FA G+++KI+I+ ++L D +P+V + SK
Sbjct: 808 NADILNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLVEMPSKSK- 866
Query: 90 CDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD 149
LS + W L S DYDG V +D + EH +R WSV
Sbjct: 867 ----------LSCVSWNNYIKN-YLASTDYDGTVQLWDASSGQGFTQFTEHR-KRAWSVS 914
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
+S+ DP + ASGSDD +++W + C+ T++ A+ VCCV+F P+ S ++A G
Sbjct: 915 FSEVDPTMLASGSDDCCVKVWS--INQRNCIDTIRNVAN---VCCVQFSPYSSRMLAFGS 969
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR---- 265
AD K Y YD+R P GH K V+Y+RFLD +TL++A TD LK+W++N +
Sbjct: 970 ADYKIYCYDLRNTRIPWCTISGHGKAVSYVRFLDPETLISASTDNTLKIWDLNRTNCSGL 1029
Query: 266 ----VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EP 318
T GH N +NFVGLSV H G + CGSETN+VF Y + P+ H F +P
Sbjct: 1030 STDSCSLTLNGHTNEKNFVGLSV--HDGYITCGSETNEVFSYYKTFPMPITSHRFGSIDP 1087
Query: 319 VTAAGS---ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+T + + FVSSVCWR +VA S G + V
Sbjct: 1088 ITGQVTNEDNQQFVSSVCWRGKSN---MVVAANSSGSIKVL 1125
>gi|168010514|ref|XP_001757949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690826|gb|EDQ77191.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 184/346 (53%), Gaps = 34/346 (9%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVV 84
F ++ T+ N A + + + FD + FAT G+ ++I+++ ++L +H V
Sbjct: 476 FEVKATLRHGDLLNTA--NMVCSLSFDRDEEYFATAGVCKRIKVFECDTILNEH----VD 529
Query: 85 DHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR 144
H V + I +KLSS+ W G L S DY+GVV +D + E +EH +R
Sbjct: 530 IHYPVVE--IPCRSKLSSVCWN-GYIKSHLASCDYEGVVQLWDASNNRVLKEYEEHE-KR 585
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
WSVD+SK P ASGSDDGT+++W + + + T++ A+ VCC++F P L
Sbjct: 586 AWSVDFSKAYPTKLASGSDDGTVKLWS--INQERSIGTIKTKAN---VCCIQFPPDSGHL 640
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDS 264
+ G AD K Y YD+R P+ + H+K V+Y++F+D TLV+A TD LKLW++ +
Sbjct: 641 LTFGSADYKVYVYDLRTTKLPLCILASHQKAVSYVKFVDSVTLVSASTDNTLKLWDLTRA 700
Query: 265 RVI--------RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF 316
TY GH N +NF+GLS+ G + CGSETN VF Y + H F
Sbjct: 701 NTAPHAQTGCSLTYTGHTNEKNFIGLSI--ADGYIACGSETNAVFAYHKSLPMEMASHKF 758
Query: 317 ---EPVTAAGSER---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+P+T E FVSSVCWR G+ + TLVA S G + +
Sbjct: 759 GCTDPITGREVEEDGGQFVSSVCWR--GKSQ-TLVAANSMGNIKIL 801
>gi|357136242|ref|XP_003569714.1| PREDICTED: protein SPA1-RELATED 3-like [Brachypodium distachyon]
Length = 781
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 180/331 (54%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----PVVAVVDHSKVCDYYICT 96
S+ + + FD + FAT G+ +KI+++ ++ +H PVV + + SK
Sbjct: 471 SNLVCSVGFDRDNEFFATAGVNKKIKVFEYNMLVNEHRDIHYPVVEMSNRSK-------- 522
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W + S D++G+V +D+ + E EH RRVWSVD+S DP
Sbjct: 523 ---LSCICWNSYMKSHI-ASSDFEGLVQVWDVTRSQVFVEMREHE-RRVWSVDFSLADPT 577
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
SGSDDG++++W G V T++ +R+ VC V+F P + +A G AD K Y
Sbjct: 578 KLVSGSDDGSVKLWSMNQAGS--VGTIR---TRANVCSVQFQPDSARSIAIGSADHKIYC 632
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV--NDSRVI----RTY 270
YD+R + P GH KTV+Y++++D T+V+ TD LKLW++ N SR+I +T+
Sbjct: 633 YDLRNIRAPYSTLVGHTKTVSYVKYVDASTIVSGSTDNSLKLWDLSMNQSRIIDNPVQTF 692
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAA--GSE 325
GH N +NFVGLS+ G + GSETN+VFVY + PV + F +P++ +
Sbjct: 693 TGHTNTKNFVGLSI--SDGYIATGSETNEVFVYHKAFPMPVLAYKFNVTDPISGQEIDDQ 750
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+S VCWR G+ TL++ S G + V
Sbjct: 751 SQFISCVCWR--GQSS-TLLSANSSGNIKVL 778
>gi|168021105|ref|XP_001763082.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685565|gb|EDQ71959.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 756
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 182/352 (51%), Gaps = 47/352 (13%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----P 79
F ++ T+ N A + + + FD + FAT G+ ++I+++ ++L +H P
Sbjct: 429 FEVKATLRHGDLLNTA--NMVCSLSFDRDEEYFATAGVCKRIKVFECDTILNEHVDIHYP 486
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERD- 138
VV + SK LSS+ W G L S DY+GVV +D VP RD
Sbjct: 487 VVEMPCRSK-----------LSSVCWN-GYIKSHLASCDYEGVVQLWD--ANVPRVLRDY 532
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
E +R WSVD+SK DP ASGSDDGT+++W S++ +++ VCCV+F
Sbjct: 533 EEHEKRAWSVDFSKADPTKLASGSDDGTVKLWSIN------QSSIGTIKTKANVCCVQFP 586
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKL 258
P L+ G AD K Y YD+R P+ + H+K V+Y++F+D TLV+A TD LKL
Sbjct: 587 PDSGHLLTFGSADYKVYVYDLRTTKLPLCILASHQKAVSYVKFVDSVTLVSASTDNTLKL 646
Query: 259 WNVNDSRVI--------RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
W++ + TY GH N +NF+GLS+ G + CGSETN VF Y
Sbjct: 647 WDLTRANTTPHAQTGCSLTYTGHTNEKNFIGLSI--ADGYIACGSETNAVFAYHKSLPME 704
Query: 311 VWVHDF---EPVTAAGSER---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ H F +P+T E FVSSVCWR G+ + TLVA S G + +
Sbjct: 705 MASHKFGCTDPITGREVEEDGGQFVSSVCWR--GKSQ-TLVAANSMGNIKIL 753
>gi|440897554|gb|ELR49211.1| E3 ubiquitin-protein ligase RFWD2, partial [Bos grunniens mutus]
Length = 608
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 177/324 (54%), Gaps = 28/324 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 286 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 339
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 340 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 395
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 396 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 450
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 451 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 510
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 511 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 568
Query: 333 CWRRVGEDECTLVAGGSDGLLHVF 356
CWR + D +LV+ LLH+F
Sbjct: 569 CWRALP-DGVSLVSLRY-KLLHIF 590
>gi|167525172|ref|XP_001746921.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774701|gb|EDQ88328.1| predicted protein [Monosiga brevicollis MX1]
Length = 499
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 171/325 (52%), Gaps = 26/325 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IE DP ++ FAT G++++IR+Y+ +VL A + H + + P+K+S L
Sbjct: 183 VSSIELDPEENRFATAGVSKQIRVYDYNTVLSRGRQGAEI-HLPILT--MDCPSKISCLA 239
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W P G L S D G V +D+ PI EH RRVWSVD ++ +PVL ASGSDD
Sbjct: 240 WNP-VQGHQLASSDNHGSVRVWDVNAGTPITVFQEHE-RRVWSVDVNRQNPVLLASGSDD 297
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W R + P+ VCCV F+ + VA G AD + YD+RK
Sbjct: 298 RQVKIWSTRIPQHSVYTMTGPAN----VCCVRFNESDGNYVAFGSADHHIHYYDLRKPNK 353
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
V F GH K V+Y++FL L++A TDG L++W V+ R + GH N RNFVGL+
Sbjct: 354 EVWTFRGHEKAVSYVQFLSGHELLSASTDGTLRVWRVDQQNAHRAFAGHCNERNFVGLA- 412
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVW--VHDFE-----PVTAAG------SERGFVSS 331
R GSE N V+VY P+ D E PV AAG + RGFVS+
Sbjct: 413 RRDANFFVTGSEDNAVYVYYKGLTAPLLRGACDTEAAVPQPVVAAGQAGAEPASRGFVSA 472
Query: 332 VCWRRVGEDECTLVAGGSDGLLHVF 356
V WRR D+ LVA S+G L V+
Sbjct: 473 VSWRRT--DDALLVA-NSEGTLLVY 494
>gi|242066674|ref|XP_002454626.1| hypothetical protein SORBIDRAFT_04g034480 [Sorghum bicolor]
gi|241934457|gb|EES07602.1| hypothetical protein SORBIDRAFT_04g034480 [Sorghum bicolor]
Length = 725
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 181/342 (52%), Gaps = 42/342 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 394 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 447
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S V+ S DY+G+V +D++ + + E +EH +R WSVD+S+ DP + SGSDD
Sbjct: 448 WN-KYSKNVIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTDPSMLVSGSDD 505
Query: 165 GTMQMWDPRC--------DGGKCVSTVQPSAS-----------------RSAVCCVEFHP 199
+ + + DG ++P ++ +C V+++P
Sbjct: 506 CKVFGFSRQLTAEMIVVSDGHSAYLNLKPVCQVKVWCTKQEASVINIDMKANICSVKYNP 565
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
+ VA G AD + +D+R PV +F GH+K V+Y++FL + L +A TD L+LW
Sbjct: 566 GSNFYVAVGSADHHIHYFDLRNPSAPVHIFGGHKKAVSYVKFLSNNELASASTDSTLRLW 625
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV 319
+V D+ +RT++GH N +NFVGLSV + + CGSETN+VFVY +P H F
Sbjct: 626 DVKDNCPVRTFRGHKNEKNFVGLSV--NNEYIACGSETNEVFVYHKAISKPAASHRFVSS 683
Query: 320 TAAGSERG----FVSSVCWRRVGEDECTLVAGGSDGLLHVFV 357
++ F+S+VCW+ D T++ S G + V V
Sbjct: 684 DLDDADDDPGSYFISAVCWK---SDSPTMLTANSQGTIKVLV 722
>gi|357452949|ref|XP_003596751.1| SPA1-like protein [Medicago truncatula]
gi|355485799|gb|AES67002.1| SPA1-like protein [Medicago truncatula]
Length = 875
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 184/331 (55%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+I+ +++ + +PVV + SK
Sbjct: 565 SNLVCSLSFDRDGEFFATAGVNKKIKIFECDTIIKGDRDIHYPVVEMACRSK-------- 616
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSSL W ++ S +++GVV +D+ + + E EH RRVWS+D+S DP
Sbjct: 617 ---LSSLCWNTYIKSQI-ASSNFEGVVQLWDVTRSQILSEMREHE-RRVWSIDFSSADPT 671
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASGSDDG++++W + G + T++ A+ VCCV+F + +A G AD + Y
Sbjct: 672 MLASGSDDGSVKLWS--INQGVSIGTIKTKAN---VCCVQFPLDSARYLAFGSADHRIYY 726
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--DSRV----IRTY 270
YD+R + P+ GH KTV+YI+F+D LV+A TD LKLW+++ SRV I+++
Sbjct: 727 YDLRNLRVPLCTLVGHNKTVSYIKFVDNVNLVSASTDNTLKLWDLSTCTSRVVDSPIQSF 786
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE---PVTAAGSERG 327
GH N +NFVGLSV G + GSETN+VFVY + P F+ P++ +
Sbjct: 787 TGHTNVKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPALQFKFQNTDPISGNEVDDA 844
Query: 328 --FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVSSVCWR G+ TL+A S G + +
Sbjct: 845 AQFVSSVCWR--GQSP-TLIAANSTGNVKIL 872
>gi|302771373|ref|XP_002969105.1| hypothetical protein SELMODRAFT_451298 [Selaginella moellendorffii]
gi|300163610|gb|EFJ30221.1| hypothetical protein SELMODRAFT_451298 [Selaginella moellendorffii]
Length = 595
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 169/316 (53%), Gaps = 28/316 (8%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIK-----SVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
++FDP D F T ++ +R++ S++V +P + I T KLS
Sbjct: 299 LDFDPGDEFFVTASVSGYLRVFEFPKAVRWSLVVWNPSLE-----------IQTGKKLSC 347
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ W S + + DYDG++ +D+ DEH RR+WSVD+S +P SG
Sbjct: 348 VSWD-KFSKSCVATSDYDGIIKIWDISACQNTVNYDEHE-RRIWSVDFSPMEPSRLVSGG 405
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DDG +++W V TV+ A+ +C V F+P S+LV AG AD Y YD+R+
Sbjct: 406 DDGKVKLWSKELKTS--VLTVEVKAN---ICSVTFNPISSNLVGAGSADHCIYYYDLRQT 460
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P+ +F GH K V+Y++F + +V+A TDG L+LW++ ++ Y+GH N +NFVGL
Sbjct: 461 KCPLHLFKGHEKAVSYVKFTPSNEMVSASTDGTLRLWSLESWNTLQVYRGHTNEKNFVGL 520
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-RGFVSSVCWRRVGEDE 341
SV + CGSETN+V+VY +P H F AA + R FVS+VCWRR D
Sbjct: 521 SV--TSDYIACGSETNEVYVYHKGIPKPALSHLFARKDAADDDTRPFVSAVCWRR--SDS 576
Query: 342 CTLVAGGSDGLLHVFV 357
T++A S G + +
Sbjct: 577 HTMLAASSQGEIRALM 592
>gi|159464074|ref|XP_001690267.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284255|gb|EDP10005.1| predicted protein [Chlamydomonas reinhardtii]
Length = 280
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 47 VIEFDPSDSVFATGGIARKIRIYNIKSV---LVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
+EF P + A GG+ ++IR+YN+ S L D + ++ + P+K+S +
Sbjct: 12 ALEFSPDGRLLAAGGVDKQIRLYNLSSFFGDLEDDDELGLLTDAADGAVVQRMPSKVSCI 71
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
W P G V+ GDYDGV+++ + + + D HGGR++WSV +S P L AS +D
Sbjct: 72 SWSPFMDG-VMTVGDYDGVLLQLHIASGHQLSDVDAHGGRKIWSVAHSSRRPHLAASAAD 130
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T ++W R CV+T+QP+ R++VCCV+F P ++A C+D+ +Y YD+R++
Sbjct: 131 DRTARLWAGR-GLAACVATLQPN-PRASVCCVDFSPEHDHMLALACSDRVSYLYDLRRLA 188
Query: 224 -DPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDS---RVIRTYKGHVNNRNF 279
P+ H + +Y RFL D LVTA TD L LW++ ++ R ++GH N +NF
Sbjct: 189 GGPLAALRHHSRPASYCRFLGGDRLVTAATDASLALWDLRNAVPQLPARVFRGHRNEKNF 248
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
VGLSV GL+ CGSE ++ F Y W +P+
Sbjct: 249 VGLSVRWPDGLVACGSECSRAFAYHTSWSDPL 280
>gi|390346065|ref|XP_003726470.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like
[Strongylocentrotus purpuratus]
Length = 647
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 177/331 (53%), Gaps = 25/331 (7%)
Query: 33 SSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY 92
S + P S + IEFD + FA G+ +KI+++ +V++D + H C+
Sbjct: 332 SYADPYNGQSSIVSSIEFDKDNDFFAIAGVTKKIKVFEYGTVIMDAVDIHYPVHEMACN- 390
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
+K+S + W G VL S DY+G V +D V EH +R WS+D+++
Sbjct: 391 -----SKISCVAWSAYHKG-VLASSDYEGTVTLWDAFAGVKTQSFQEHE-KRCWSIDFNR 443
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
DP L ASGSDD +++W + + +++++ A+ VCCV+F+P +A G AD
Sbjct: 444 MDPKLLASGSDDAKVKLWS--TNQEQSITSLEAKAN---VCCVKFNPTKMYGLAFGSADH 498
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+ YD+R P+ VF GHRK V+Y +F++ + +V+A TD LKLWNV+ +RT++G
Sbjct: 499 CVHYYDLRHPKQPLNVFKGHRKAVSYTKFVNSEEIVSASTDSQLKLWNVDKPHCLRTFRG 558
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE------- 325
H+N +NFVGL+ + + CGSE N +FV+ + + F+ V + +
Sbjct: 559 HINEKNFVGLT--SNDDYIACGSENNSLFVFYKGLSKQILTFKFDTVRSLMDKDKKEDDS 616
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVS+V W R G + LVA S G + V
Sbjct: 617 NEFVSAVAW-RTGSN--VLVAANSQGTIKVL 644
>gi|224128308|ref|XP_002329131.1| predicted protein [Populus trichocarpa]
gi|222869800|gb|EEF06931.1| predicted protein [Populus trichocarpa]
Length = 857
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 186/331 (56%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+++ +++ + +PVV +V SK
Sbjct: 547 SNLVCSLSFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVSRSK-------- 598
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSS+ W + ++ S +++GVV +D+ + + E EH RRVWS+D+S DP
Sbjct: 599 ---LSSICWNRYITSQI-ASSNFEGVVQVWDVTRSQVVTEMREHE-RRVWSIDFSSADPT 653
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASGSDDG++++W + G + +++ A+ VC V+F S +A G AD + Y
Sbjct: 654 MLASGSDDGSVKLWS--INQGVSIGSIKTKAN---VCSVQFPMDSSRSIAFGSADHRIYY 708
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--DSRVI----RTY 270
YD+R P+ GH KTV+Y++F+D +V+A TD LKLW+++ SRVI +++
Sbjct: 709 YDLRNSKVPLCTLIGHNKTVSYVKFVDTTNIVSASTDNTLKLWDLSMGTSRVIDNPLQSF 768
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSERG 327
GH+N +NFVGLSV G + GSETN+VFVY + PV F +P++ +
Sbjct: 769 TGHMNVKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVLSFKFNNTDPLSGHEMDDA 826
Query: 328 --FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SSVCWR G+ TLVA S G + +
Sbjct: 827 AQFISSVCWR--GQS-STLVAANSTGNIKIL 854
>gi|4559377|gb|AAD23037.1| putative photomorphogenesis repressor protein [Arabidopsis
thaliana]
Length = 532
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 173/328 (52%), Gaps = 42/328 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNI-----KSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ FDP + A GI++KI+I++ +SV V +P+V +V+ SK LS
Sbjct: 225 LSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSK-----------LSC 273
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ W L S DYDGVV +D + EH +R WSVD+S DP SGS
Sbjct: 274 VCWNSYIKN-YLASTDYDGVVQIWDAGTGQGFSQYTEHQ-KRAWSVDFSPSDPTKFVSGS 331
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD ++++W + + + T+ A+ VCCV+F + + L+A G AD K Y YD+R +
Sbjct: 332 DDCSVKLWS--INEKRSLGTIWSPAN---VCCVQFSSYSNHLLAFGSADYKVYCYDLRYV 386
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--------VIRTYKGHV 274
P GH K V+Y++F+D +T+V+A TD LKLWN+N + TYKGH
Sbjct: 387 KTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHT 446
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT-AAGSER-----GF 328
N +NFVGLSV G + CGSETN+V+ Y P+ + F V +G+E F
Sbjct: 447 NQKNFVGLSVL--DGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQF 504
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLLHVF 356
VSSVCWR+ LVA S G + +
Sbjct: 505 VSSVCWRKKSN---MLVAANSTGNMKLL 529
>gi|324507138|gb|ADY43033.1| E3 ubiquitin-protein ligase RFWD2 [Ascaris suum]
Length = 646
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 173/334 (51%), Gaps = 34/334 (10%)
Query: 33 SSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY 92
S +SP ++ + IEFD F G+ +KI++Y ++V VD++ Y
Sbjct: 334 SDTSPALSI---VSSIEFDKDGEYFVVAGVTKKIKVYAFRNV---------VDNADALHY 381
Query: 93 YICT---PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD 149
+ +K+S++ W P T +L S DYDG V +D I EH +R W+V
Sbjct: 382 PLTQLQCNSKISNVSWNPYTKN-MLASSDYDGTVQLWDTYMSKSIRRYQEHE-KRCWTVQ 439
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
++ DP L ASGSDD +++W D + V ++ ++ VCCV F P + G
Sbjct: 440 FNNVDPQLMASGSDDAKVKLWSLLSD--RSVGSID---AKVNVCCVYFSPTSRHSLVFGS 494
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
AD + YD+R V VF GHRK V+Y+++ + + +V+A TD L+LW+VN + IRT
Sbjct: 495 ADHCVHLYDLRNTSKAVNVFRGHRKAVSYVKYCNENEVVSASTDSNLRLWDVNTGKCIRT 554
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-------EPVTAA 322
KGH N +NFVGL+ G + CGSE NQ++VY +P+ +DF P
Sbjct: 555 MKGHQNEKNFVGLAT--DGSHIVCGSENNQLYVYYKGLSDPLMCYDFGRAEAERTPFATL 612
Query: 323 GSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
S FVS+VCW++ + +VA S G H+
Sbjct: 613 ESTSDFVSAVCWKK---NTNIIVAANSQGTTHIL 643
>gi|452821129|gb|EME28163.1| E3 ubiquitin-protein ligase RFWD2 [Galdieria sulphuraria]
Length = 541
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 158/284 (55%), Gaps = 28/284 (9%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCD 91
PN +S+ I IEFD AT G+ ++IRI+ S+L +PV +V
Sbjct: 279 PN--ISNIISSIEFDRDSEYIATAGVTKRIRIFEFGSILESVLDTHYPVKEMV------- 329
Query: 92 YYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS 151
+ KLS L W +L S DY+GVV +D + E +EH +R+W VD+S
Sbjct: 330 ----SSTKLSCLSWNSYIHNHLLSS-DYEGVVTLWDAITGQTLNEFEEHE-KRIWCVDFS 383
Query: 152 KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD 211
K +P AS SDDG +++W +++V +R+ VCCV+FHP L++ G AD
Sbjct: 384 KVEPTRFASASDDGKVKIW-----SSLQLNSVATIENRANVCCVQFHPTMEHLISFGSAD 438
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVI-RTY 270
+ Y YD+R+ + V GHRK V+YI+FL+ LV+A TD LKLWNV+ S V+ R++
Sbjct: 439 HQVYMYDLRQTKQALQVLRGHRKAVSYIQFLNGFHLVSASTDNTLKLWNVSQSSVVQRSF 498
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVH 314
+GH N +NFVGLS + + CGSE N V+VY P+ ++
Sbjct: 499 QGHRNEKNFVGLST--NEEYIACGSENNAVYVYYKEISIPMLLY 540
>gi|340725942|ref|XP_003401323.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Bombus
terrestris]
Length = 676
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 179/327 (54%), Gaps = 40/327 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICTPAK 99
+ IEFD + FA G+ ++I++++ +V+ D +P V +V SK+
Sbjct: 372 VSSIEFDKDNEFFAIAGVTKRIKVFDYSAVIRDTVDIHYPCVEMVSSSKI---------- 421
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVL 157
S + W G +L S DY+G+V +D ++ F+ E +R WSVD++ D L
Sbjct: 422 -SCVSWNSFHKG-MLASSDYEGIVTVWDAATCQRTKTFQEHE---KRCWSVDFNDVDTKL 476
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGSDD +++W D +V +++ VCCV+F+P S +A G AD + Y
Sbjct: 477 IASGSDDARVKLWSLNND-----HSVASLEAKANVCCVKFNPRSSCHLAFGSADHCVHYY 531
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
D+R M + + +F GHRK V+Y++F++ + +V+A TD LK+WN+N+ +R++ GHVN +
Sbjct: 532 DLRNMKEALCIFKGHRKAVSYVKFINKEEIVSASTDSQLKMWNINNPHCLRSFVGHVNEK 591
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA--AGSER------GFV 329
NF+GL+ G + CGSE N ++VY + ++ + F+ V + ER FV
Sbjct: 592 NFIGLTT--DGDYVACGSENNALYVYYKGLSKQLFSYKFDAVRSILEIQERREEDLNEFV 649
Query: 330 SSVCWRRVGEDECTLVAGGSDGLLHVF 356
S+VCW+++ +VA S G + +
Sbjct: 650 SAVCWKQMSN---VVVAANSQGTIKIL 673
>gi|449266465|gb|EMC77518.1| E3 ubiquitin-protein ligase RFWD2, partial [Columba livia]
Length = 580
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 166/303 (54%), Gaps = 26/303 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 285 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 338
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 339 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 394
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 395 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 449
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 450 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF 509
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 510 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 567
Query: 333 CWR 335
CWR
Sbjct: 568 CWR 570
>gi|307110243|gb|EFN58479.1| hypothetical protein CHLNCDRAFT_6949, partial [Chlorella
variabilis]
Length = 641
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 170/326 (52%), Gaps = 37/326 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVL-------VDHPVVAVVDHSKVCDYYICTP 97
+ +EFD ++FAT G++++I I+ SV+ + PVV +V SK
Sbjct: 337 VSSLEFDKEGALFATAGVSKRISIFEFASVVPSAASPGLHTPVVELVSRSK--------- 387
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
LS L W + S DY+GVV +D+ + E + H +R+WSVD+ + DP L
Sbjct: 388 --LSCLSWNKYIQAHI-ASSDYEGVVSVWDVGTSGQLLEYEAHS-KRIWSVDFCEADPTL 443
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGSDD ++++W K S+V +++ VC V + P + +A G AD Y Y
Sbjct: 444 LASGSDDCSVKVW-----STKSPSSVAQIDTKANVCTVRWRPGSAHELALGSADHGVYLY 498
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--DSRVIRTYKGHVN 275
D R+ PV F GHRK V+Y+RF LV+A TD L+LW + + +R ++GH N
Sbjct: 499 DTRRTDAPVATFRGHRKAVSYVRFCGSGELVSASTDSTLRLWGLGAPTTDALRVFEGHSN 558
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGS-----ERGFVS 330
+NFVGL+ G L CGSET+ ++VY +PV F AG + F+S
Sbjct: 559 EKNFVGLAA--DGDFLACGSETSDLYVYYKALSKPVAQQAFTAPGEAGDADTQHNKSFIS 616
Query: 331 SVCWRRVGEDECTLVAGGSDGLLHVF 356
+VCWR + TL+A S G + VF
Sbjct: 617 AVCWRPGAQ---TLLAANSMGTVKVF 639
>gi|307211652|gb|EFN87676.1| E3 ubiquitin-protein ligase RFWD2 [Harpegnathos saltator]
Length = 688
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 178/327 (54%), Gaps = 40/327 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICTPAK 99
+ IEFD + FA G+ ++I++++ +V+ D +P V +V SK+
Sbjct: 384 VSSIEFDKDNEFFAIAGVTKRIKVFDYGAVIRDTVDIHYPCVEMVSSSKI---------- 433
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVL 157
S + W G +L S DY+G V +D ++ F+ E +R WSVD++ D L
Sbjct: 434 -SCVSWNSFHKG-MLASSDYEGTVTVWDATTGQRTKAFQEHE---KRCWSVDFNDVDTKL 488
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGSDD +++W D +V +++ VCCV+F+P S +A G AD + Y
Sbjct: 489 IASGSDDARVKLWALNTD-----YSVASLEAKANVCCVKFNPRSSCHLAFGSADHCVHYY 543
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
D+R M + + +F GHRK V+Y++F++ + +V+A TD LK+WN+N+ +R++ GHVN +
Sbjct: 544 DLRNMKEALCIFKGHRKAVSYVKFINKEEIVSASTDSQLKMWNINNPLCLRSFVGHVNEK 603
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG--------FV 329
NFVGL+ G + CGSE N ++VY + ++ + F+ V + + FV
Sbjct: 604 NFVGLAT--DGDYVACGSENNALYVYYKGLTKQLFSYKFDAVRSILELQDRREEDLNEFV 661
Query: 330 SSVCWRRVGEDECTLVAGGSDGLLHVF 356
S+VCWR++ +VA S G++ +
Sbjct: 662 SAVCWRQMSN---VVVAANSQGIIKIL 685
>gi|255585740|ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223526576|gb|EEF28831.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 889
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 180/331 (54%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+I+ +++ + +PVV I T
Sbjct: 579 SNLVCSLSFDRDGEFFATAGVNKKIKIFECDAIINENRDIHYPVVE-----------IAT 627
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+KLSS+ W ++ S +++GVV +D+ + + E EH RRVWS+D+S DP
Sbjct: 628 RSKLSSVCWNSYIKSQI-ASSNFEGVVQVWDITRSQVLTEMREHE-RRVWSIDFSSADPT 685
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
ASGSDD ++++W+ + G + T++ A+ VC V+F S +A G AD K Y
Sbjct: 686 TLASGSDDCSVKLWN--INQGVSIGTIRTKAN---VCSVQFPLDSSRSLAFGSADHKVYY 740
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--DSRVIRT----Y 270
YD+R P+ GH KTV+Y+RF+D LV+A TD LKLW+++ SR+I T +
Sbjct: 741 YDLRNAKVPLCTLVGHNKTVSYVRFIDSTNLVSASTDNTLKLWDLSMCASRIIDTPLQSF 800
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSE-- 325
GH+N +NFVGLSV G + GSETN+VF+Y + P F +P++ +
Sbjct: 801 TGHMNVKNFVGLSV--SDGYIATGSETNEVFIYHKAFPMPALSFKFNNTDPLSGHEMDDP 858
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SSVCWR TLVA S G + +
Sbjct: 859 AQFISSVCWR---SQSSTLVAANSTGNIKIL 886
>gi|363736531|ref|XP_426628.3| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Gallus gallus]
Length = 698
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 166/303 (54%), Gaps = 26/303 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 397 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 450
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 451 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 506
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 507 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 561
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 562 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF 621
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 622 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 679
Query: 333 CWR 335
CWR
Sbjct: 680 CWR 682
>gi|110742626|dbj|BAE99225.1| putative photomorphogenesis repressor protein [Arabidopsis thaliana]
Length = 1029
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 173/328 (52%), Gaps = 42/328 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNI-----KSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ FDP + A GI++KI+I++ +SV V +P+V +V+ SK LS
Sbjct: 722 LSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSK-----------LSC 770
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ W L S DYDGVV +D + EH +R WSVD+S DP SGS
Sbjct: 771 VCWNSYIKN-YLASTDYDGVVQIWDAGTGQGFSQYTEHQ-KRAWSVDFSPSDPTKFVSGS 828
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD ++++W + + + T+ A+ VCCV+F + + L+A G AD K Y YD+R +
Sbjct: 829 DDCSVKLWS--INEKRSLGTIWSPAN---VCCVQFSSYSNHLLAFGSADYKVYCYDLRYV 883
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--------VIRTYKGHV 274
P GH K V+Y++F+D +T+V+A TD LKLWN+N + TYKGH
Sbjct: 884 KTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHT 943
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA-AGSER-----GF 328
N +NFVGLSV G + CGSETN+V+ Y P+ + F V +G+E F
Sbjct: 944 NQKNFVGLSVL--DGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQF 1001
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLLHVF 356
VSSVCWR+ LVA S G + +
Sbjct: 1002 VSSVCWRKKSN---MLVAANSTGNMKLL 1026
>gi|30690337|ref|NP_182157.2| protein SUPPRESSOR OF PHYA-105 1 [Arabidopsis thaliana]
gi|75337885|sp|Q9SYX2.1|SPA1_ARATH RecName: Full=Protein SUPPRESSOR OF PHYA-105 1
gi|4809171|gb|AAD30124.1|AF135455_1 phytochrome A supressor spa1 [Arabidopsis thaliana]
gi|330255587|gb|AEC10681.1| protein SUPPRESSOR OF PHYA-105 1 [Arabidopsis thaliana]
Length = 1029
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 173/328 (52%), Gaps = 42/328 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNI-----KSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ FDP + A GI++KI+I++ +SV V +P+V +V+ SK LS
Sbjct: 722 LSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSK-----------LSC 770
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ W L S DYDGVV +D + EH +R WSVD+S DP SGS
Sbjct: 771 VCWNSYIKN-YLASTDYDGVVQIWDAGTGQGFSQYTEHQ-KRAWSVDFSPSDPTKFVSGS 828
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD ++++W + + + T+ A+ VCCV+F + + L+A G AD K Y YD+R +
Sbjct: 829 DDCSVKLWS--INEKRSLGTIWSPAN---VCCVQFSSYSNHLLAFGSADYKVYCYDLRYV 883
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--------VIRTYKGHV 274
P GH K V+Y++F+D +T+V+A TD LKLWN+N + TYKGH
Sbjct: 884 KTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHT 943
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA-AGSER-----GF 328
N +NFVGLSV G + CGSETN+V+ Y P+ + F V +G+E F
Sbjct: 944 NQKNFVGLSVL--DGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQF 1001
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLLHVF 356
VSSVCWR+ LVA S G + +
Sbjct: 1002 VSSVCWRKKSN---MLVAANSTGNMKLL 1026
>gi|281340942|gb|EFB16526.1| hypothetical protein PANDA_009573 [Ailuropoda melanoleuca]
Length = 606
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 167/305 (54%), Gaps = 26/305 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 314 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 367
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 368 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 423
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 424 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 478
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 479 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 538
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 539 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 596
Query: 333 CWRRV 337
CWR +
Sbjct: 597 CWRAL 601
>gi|302843772|ref|XP_002953427.1| hypothetical protein VOLCADRAFT_42633 [Volvox carteri f.
nagariensis]
gi|300261186|gb|EFJ45400.1| hypothetical protein VOLCADRAFT_42633 [Volvox carteri f.
nagariensis]
Length = 353
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 168/332 (50%), Gaps = 42/332 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
FD D FA G++++I+IY ++VL H + H V + I + ++LSS+ W
Sbjct: 37 FDRDDEFFAVAGVSKRIKIYEREAVLRSH----IGAHYPVLE--ISSRSRLSSVTWSGYI 90
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G L S DY+GVV +D + + +EH +RVWS+D+S+ DP SG DDG +++
Sbjct: 91 KGH-LASADYEGVVQLWDANTNSELMQFEEHR-KRVWSIDFSQADPARLLSGGDDGLIKL 148
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + + + R+ VC V+F P L+AAGCA+ + + YD+R + +
Sbjct: 149 WSIQQETSTTTIDL-----RANVCSVQFSPTSPHLLAAGCANYRIFLYDIRNTSRALHIL 203
Query: 230 DGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN-------------------DSRVIRTY 270
GH + V+Y+RFL LV+A TD L+LW ++ ++ +
Sbjct: 204 PGHTRAVSYVRFLSPTQLVSASTDNTLRLWQLDRLGAGVPAASAAPGPVDAAAGSCVQVF 263
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG--- 327
+GH N RNF GLSV G + CGSE N+VF Y PV +DF AA G
Sbjct: 264 RGHANERNFTGLSV-SADGYISCGSENNRVFCYYQSLPMPVTSYDFSSPDAASVGIGCVG 322
Query: 328 ---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVSSVCW R L+A S GL+ +F
Sbjct: 323 SGQFVSSVCWSRRSN---LLLAANSVGLIKLF 351
>gi|126306441|ref|XP_001373596.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2 [Monodelphis
domestica]
Length = 808
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 167/305 (54%), Gaps = 26/305 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 430 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 483
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 484 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 539
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 540 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 594
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 595 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNF 654
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 655 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 712
Query: 333 CWRRV 337
CWR +
Sbjct: 713 CWRAL 717
>gi|297828353|ref|XP_002882059.1| suppressor of phya-105 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327898|gb|EFH58318.1| suppressor of phya-105 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1028
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 173/328 (52%), Gaps = 42/328 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNI-----KSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ FDP + A GI++KI+I++ +SV V +P+V +V+ SK LS
Sbjct: 721 LSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSK-----------LSC 769
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ W L S DYDGVV +D + EH +R WSVD+S DP SGS
Sbjct: 770 VCWNSYIKN-YLASTDYDGVVQIWDAGTGQGFSQYTEHQ-KRAWSVDFSPSDPTKFVSGS 827
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD ++++W + + + T+ A+ VCCV+F + + L+A G AD K Y YD+R +
Sbjct: 828 DDCSVKLWS--INEKRSLGTIWSPAN---VCCVQFSSYSNHLLAFGSADYKVYCYDLRYV 882
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--------VIRTYKGHV 274
P GH K V+Y++F+D +T+V+A TD LKLWN+N + TYKGH
Sbjct: 883 KTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHT 942
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA-AGSER-----GF 328
N +NFVGLSV G + CGSETN+V+ Y P+ + F V +G+E F
Sbjct: 943 NQKNFVGLSVL--DGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQF 1000
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLLHVF 356
VSSVCWR+ LVA S G + +
Sbjct: 1001 VSSVCWRKKSN---MLVAANSTGNMKLL 1025
>gi|22331100|ref|NP_683567.1| ubiquitin-protein ligase RFWD2 [Arabidopsis thaliana]
gi|332642126|gb|AEE75647.1| ubiquitin-protein ligase RFWD2 [Arabidopsis thaliana]
Length = 837
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 177/331 (53%), Gaps = 47/331 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICT 96
S+ + + FD +FAT G+ +KI+I+ S++ D +PVV + SK
Sbjct: 534 SNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSK-------- 585
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSSL W ++ S ++DGVV +D+ + + E EH +RVWS+D S DP
Sbjct: 586 ---LSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEHK-KRVWSIDISSADPT 640
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGSDDGT G + T++ A+ VCCV+F +A G AD K Y
Sbjct: 641 LLASGSDDGT----------GVSIGTIKTKAN---VCCVQFPSDSGRSLAFGSADHKVYY 687
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN------DSRVIRTY 270
YD+R P+ GH KTV+Y++F+D TLV++ TD LKLW+++ + + ++
Sbjct: 688 YDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSF 747
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV-TAAGSE---- 325
GH N +NFVGLSV G + GSETN+VFVY + PV + F + +G E
Sbjct: 748 TGHTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDA 805
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SS+CWR G+ TLVA S+G + +
Sbjct: 806 SQFISSICWR--GQS-STLVAANSNGNIKIL 833
>gi|344278495|ref|XP_003411029.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2 [Loxodonta africana]
Length = 720
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 166/303 (54%), Gaps = 26/303 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 421 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 474
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 475 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 530
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 531 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 585
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 586 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 645
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 646 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 703
Query: 333 CWR 335
CWR
Sbjct: 704 CWR 706
>gi|359493656|ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera]
Length = 903
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 180/329 (54%), Gaps = 37/329 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD +FAT G+ +KI+++ S+L + +P+V + SK
Sbjct: 595 SNLVCSVSFDRDGELFATAGVNKKIKVFECNSILNEDRDIHYPLVEMACRSK-------- 646
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSS+ W ++ S +++GVV +D+ + + E EH RRVWS+DYS DP
Sbjct: 647 ---LSSICWNSYIKSQI-ASSNFEGVVQVWDVTRSQVLTEMREHE-RRVWSIDYSLADPT 701
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASGSDDG++++W + G V T++ A+ VCCV+F P +A G AD + Y
Sbjct: 702 MLASGSDDGSVKLWS--INQGVSVGTIKTKAN---VCCVQFTPDSGRYLAFGSADHRIYY 756
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--DSRV----IRTY 270
YD+R P+ GH KTV+Y++F+D LV+A TD LKLW+++ +RV ++++
Sbjct: 757 YDLRNSKIPLCTLLGHNKTVSYVKFVDSTHLVSASTDNTLKLWDLSMCTARVLEGPLQSF 816
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA---AGSERG 327
GH N +NFVGLSV G + GSE N+V +Y + P F + + +
Sbjct: 817 TGHQNVKNFVGLSV--SDGYIATGSEANEVVIYHKAFPMPALTFKFNSMDSDHESDDSAQ 874
Query: 328 FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SSVCWR G+ TLVA S G + +
Sbjct: 875 FISSVCWR--GQS-STLVAANSAGNIKIL 900
>gi|119611407|gb|EAW91001.1| ring finger and WD repeat domain 2, isoform CRA_c [Homo sapiens]
Length = 460
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 166/302 (54%), Gaps = 26/302 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S +
Sbjct: 164 VSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKISCIS 217
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 218 W-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 273
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 274 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 328
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL
Sbjct: 329 KQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGL 388
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSVCWR 335
+ +G + CG+E N +++Y + + F+ V + + FVS+VCWR
Sbjct: 389 A--SNGDYIACGNENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWR 446
Query: 336 RV 337
+
Sbjct: 447 AL 448
>gi|145340093|ref|NP_192849.4| protein SPA1-related 2 [Arabidopsis thaliana]
gi|223635833|sp|Q9T014.2|SPA2_ARATH RecName: Full=Protein SPA1-RELATED 2
gi|332657574|gb|AEE82974.1| protein SPA1-related 2 [Arabidopsis thaliana]
Length = 1036
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 181/351 (51%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHP 79
F R + +S N S+ I + FD + FAT G+++KI+IY S+ + +P
Sbjct: 708 FETRGVLRTSELNN--TSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYP 765
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
+ + + SK LS + W L S DYDG+V +D+ I E
Sbjct: 766 AIEMPNRSK-----------LSGVCWNNYIRN-YLASSDYDGIVKLWDVTTGQAISHFIE 813
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S+ P ASGSDD ++++W+ + C+ T++ A+ VCCV+F P
Sbjct: 814 HE-KRAWSVDFSEACPTKLASGSDDCSVKLWN--INERNCLGTIRNIAN---VCCVQFSP 867
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
S L+A G +D + Y YD+R + P + GH K V+Y +FLD +TLVTA TD LKLW
Sbjct: 868 QSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLW 927
Query: 260 NVNDSR--------VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ + T+ GH N +NFVGLS G + CGSETN+V+ Y P+
Sbjct: 928 DLKKTTHGGLSTNACSLTFGGHTNEKNFVGLST--SDGYIACGSETNEVYAYHRSLPMPI 985
Query: 312 WVHDF---EPVTAAGSERG---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ F +P++ E FVSSVCWR+ +V+ S+G + V
Sbjct: 986 TSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSN---MVVSASSNGSIKVL 1033
>gi|110738246|dbj|BAF01052.1| COP1 like protein [Arabidopsis thaliana]
Length = 1100
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 181/351 (51%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHP 79
F R + +S N S+ I + FD + FAT G+++KI+IY S+ + +P
Sbjct: 772 FETRGVLRTSELNN--TSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYP 829
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
+ + + SK LS + W L S DYDG+V +D+ I E
Sbjct: 830 AIEMPNRSK-----------LSGVCWNNYIRN-YLASSDYDGIVKLWDVTTGQAISHFIE 877
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S+ P ASGSDD ++++W+ + C+ T++ A+ VCCV+F P
Sbjct: 878 HE-KRAWSVDFSEACPTKLASGSDDCSVKLWN--INERNCLGTIRNIAN---VCCVQFSP 931
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
S L+A G +D + Y YD+R + P + GH K V+Y +FLD +TLVTA TD LKLW
Sbjct: 932 QSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLW 991
Query: 260 NVNDSR--------VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ + T+ GH N +NFVGLS G + CGSETN+V+ Y P+
Sbjct: 992 DLKKTTHGGLSTNACSLTFGGHTNEKNFVGLST--SDGYIACGSETNEVYAYHRSLPMPI 1049
Query: 312 WVHDF---EPVTAAGSERG---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ F +P++ E FVSSVCWR+ +V+ S+G + V
Sbjct: 1050 TSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSN---MVVSASSNGSIKVL 1097
>gi|356495711|ref|XP_003516717.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max]
Length = 1129
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 172/332 (51%), Gaps = 44/332 (13%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIK-----SVLVDHPVVAVVDHSKVCDYYICTPAK 99
I + FD FA+ GI+RKI+I+ SV + +P V + + SK
Sbjct: 819 ICSLSFDRDADYFASAGISRKIKIFEFSALCNDSVDIHYPAVEMSNRSK----------- 867
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
LS + W L S DYDG+V +D + EH +R WSVD+S P A
Sbjct: 868 LSCVCWNNYIKN-YLASTDYDGIVKLWDASTGQEFSQFTEHE-KRAWSVDFSAVCPTKFA 925
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD T+++W C+ T++ +A+ VCCV+F S L+A G AD Y YD+
Sbjct: 926 SGSDDCTVKLWS--ISERNCLGTIRNAAN---VCCVQFSAHSSHLLAFGSADYSTYCYDL 980
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVI--------RTYK 271
R + P V GHRK V+Y++FLD +TLV+A TD LK+W++N + + T
Sbjct: 981 RNLRSPWCVLAGHRKAVSYVKFLDSETLVSASTDNTLKIWDLNKTSPVGASINACSLTLS 1040
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSER-- 326
GH N +NFVGLSV G + CGSETN+V+ Y PV H F +P++ ++
Sbjct: 1041 GHTNEKNFVGLSVA--DGYIACGSETNEVYTYYRSLPMPVTSHKFGSIDPISGKDTDDDN 1098
Query: 327 -GFVSSVCWR-RVGEDECTLVAGGSDGLLHVF 356
FVSSVCWR + G L+A S G + V
Sbjct: 1099 GQFVSSVCWRGKSG----MLIAANSSGCVKVL 1126
>gi|405977821|gb|EKC42254.1| E3 ubiquitin-protein ligase RFWD2 [Crassostrea gigas]
Length = 2317
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 165/300 (55%), Gaps = 27/300 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
IEFD FA G+ +KI+++ +V+ D VD + IC +K+S + W
Sbjct: 220 IEFDRDCDFFAIAGVTKKIKVFEYGTVIKD-----AVDIHYPVNEMICN-SKISCVTW-S 272
Query: 108 GTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
VL S DY+G + +D +K +F+ E +R WSVD++ DP L ASGSDD
Sbjct: 273 SYHKNVLASSDYEGTITLWDAFTGQKSKLFQEHE---KRCWSVDFNTMDPKLLASGSDDA 329
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
+++W + +++ +++ VCCV+F+P +A G AD + YD+R +
Sbjct: 330 KVKLWSINAE-----NSIACLEAKANVCCVKFNPESRYHLAFGSADHFVHYYDLRNTKEA 384
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
V+VF GHRK V+Y +FL+ +V+A TD LKLWN++ S +RT+KGH+N +NFVGL+
Sbjct: 385 VMVFKGHRKAVSYTKFLNTTEIVSASTDSQLKLWNIDKSNSLRTFKGHINEKNFVGLAT- 443
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG--------FVSSVCWRRV 337
G + CGSE N ++VY + + + F+ V + E+ FVS+V WR V
Sbjct: 444 -DGDYIACGSENNSLYVYYKGLSKQLMTYKFDTVRSVLQEKDKKEDEVNEFVSAVAWRPV 502
>gi|413946609|gb|AFW79258.1| hypothetical protein ZEAMMB73_545110 [Zea mays]
Length = 1120
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 174/341 (51%), Gaps = 45/341 (13%)
Query: 38 NAAVSDSIGVI---EFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKV 89
NA + +S VI FD + FA G+++KI+I+ ++L D +P++ + SK
Sbjct: 800 NADILNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLIEMPSKSK- 858
Query: 90 CDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD 149
LS + W L S DYDG V +D + EH +R WSV
Sbjct: 859 ----------LSCVCWNNYIKN-YLASTDYDGTVQLWDASSGQGFTQFTEHR-KRTWSVS 906
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
+S DP ASGSDD +++W + CV T++ A+ VCCV+F P+ S ++A G
Sbjct: 907 FSDVDPTKLASGSDDCCVKVWS--INQKNCVDTIRNVAN---VCCVQFSPYSSRMLAFGS 961
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR---- 265
AD K Y YD+R P GH K V+Y+RFLD TLV+A TD LK+W++N +
Sbjct: 962 ADYKIYCYDLRNTRIPWCTILGHGKAVSYVRFLDPYTLVSASTDNTLKIWDLNQTNCSGL 1021
Query: 266 ----VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EP 318
T GH N +NFVGLSV H G + CGSETN+VF Y + P+ H F +P
Sbjct: 1022 STDSCSLTLNGHTNEKNFVGLSV--HDGYITCGSETNEVFSYYKTFPMPITSHRFGSIDP 1079
Query: 319 VTAAGS---ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+T + + FVSSVCWR +VA S G + V
Sbjct: 1080 ITGQVTNEDNQQFVSSVCWRGKSN---MVVAANSSGSIKVL 1117
>gi|357128456|ref|XP_003565889.1| PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like [Brachypodium
distachyon]
Length = 1143
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 175/341 (51%), Gaps = 45/341 (13%)
Query: 38 NAAVSDSIGVI---EFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKV 89
NA + +S VI FD + FA G+++KI+I+ ++L D +P++ + SK
Sbjct: 823 NADILNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLIEMPSKSK- 881
Query: 90 CDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD 149
LS + W L S DYDG V +D + EH +R WSV
Sbjct: 882 ----------LSCVCWNSYIKN-YLASTDYDGTVQLWDASTGQGFTQFTEHR-KRAWSVS 929
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
+S+ DP ASGSDD +++W + CV T++ A+ VCCV+F P+ S ++A G
Sbjct: 930 FSEVDPTKLASGSDDCCVKVWS--INQKNCVDTIRNVAN---VCCVQFSPYSSRMLAFGS 984
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIR- 268
AD K Y YD+R P GH K V+Y+RFLD +TL++A TD LK+W++N +
Sbjct: 985 ADYKTYCYDLRHTRIPWCTISGHGKAVSYVRFLDPETLISASTDNTLKIWDLNRTNSSGL 1044
Query: 269 -------TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EP 318
T GH N +NFVGLSV H G + CGSE N+V+ Y + P+ H F +P
Sbjct: 1045 SSSACSLTLSGHTNEKNFVGLSV--HDGYITCGSENNEVYSYYKTFPMPITSHKFGSIDP 1102
Query: 319 VTAAGS---ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+T + + FVSSVCWR +VA S G + V
Sbjct: 1103 ITGQETNDDNQQFVSSVCWRGRSN---MVVAANSSGSIKVL 1140
>gi|115465541|ref|NP_001056370.1| Os05g0571000 [Oryza sativa Japonica Group]
gi|52353524|gb|AAU44090.1| unknown protein [Oryza sativa Japonica Group]
gi|113579921|dbj|BAF18284.1| Os05g0571000 [Oryza sativa Japonica Group]
gi|222632622|gb|EEE64754.1| hypothetical protein OsJ_19610 [Oryza sativa Japonica Group]
Length = 1144
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 174/341 (51%), Gaps = 45/341 (13%)
Query: 38 NAAVSDSIGVI---EFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKV 89
NA + +S VI FD + FA G+++KI+I+ ++L D +P++ + SK
Sbjct: 824 NADILNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLIEMPSKSK- 882
Query: 90 CDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD 149
LS + W L S DYDG V +D + EH +R WSV
Sbjct: 883 ----------LSCVCWNSYIKN-YLASTDYDGTVQLWDASSGQGFTQFTEHR-KRAWSVS 930
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
+S+ DP ASGSDD +++W + C T++ A+ VCCV+F P+ S ++A G
Sbjct: 931 FSEVDPTKLASGSDDCCVKVWS--INQKNCTDTIRNVAN---VCCVQFSPYSSRMLAFGS 985
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR---- 265
AD K Y YD+R P GH K V+Y+RFLD +TL++A TD LK+W++N +
Sbjct: 986 ADYKIYCYDLRNTRIPWCTISGHGKAVSYVRFLDPETLISASTDNTLKIWDLNQTNSSGL 1045
Query: 266 ----VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EP 318
T GH N +NFVGLSV H G + CGSE N+VF Y + P+ H F +P
Sbjct: 1046 STDACSMTLSGHTNEKNFVGLSV--HDGYITCGSENNEVFSYYKTFPMPITSHKFGSIDP 1103
Query: 319 VTAAGS---ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+T + + FVSSVCWR +VA S G + V
Sbjct: 1104 ITGQETNDDNQQFVSSVCWRGRSN---MVVAANSTGSIKVL 1141
>gi|356514725|ref|XP_003526054.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
Length = 804
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 185/333 (55%), Gaps = 43/333 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+++ + + + +PVV +V S
Sbjct: 494 SNLVCSLSFDRDAEFFATAGVNKKIKVFECNTTINEYRDIHYPVVEMVSRST-------- 545
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSS W ++ S +++GVV +D+ + E EH RRVWS+D+S DP
Sbjct: 546 ---LSSTCWNTYIKSQI-ASSNFEGVVQLWDVTRSQVQSEMKEHE-RRVWSIDFSSADPT 600
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGSDDG++++W+ + G V T++ A+ VCCV+F + +A G AD + Y
Sbjct: 601 LLASGSDDGSVKLWN--INQGVSVGTIKTKAN---VCCVQFPLDFAHFLAFGSADHQIYY 655
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--DSRV----IRTY 270
YD+R + P+ GH KTV+YI+F+D +LV+A TD LKLW+++ SRV I+++
Sbjct: 656 YDLRNLKVPLCAMVGHDKTVSYIKFVDTMSLVSASTDNTLKLWDLSMCASRVIDSPIQSF 715
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSER- 326
GH N +NFVGLSV G + GSETN+VF+Y + P F +P+ +G+E
Sbjct: 716 TGHKNVKNFVGLSV--SDGYIATGSETNEVFIYHKAFPMPALSFKFYSSDPL--SGNEED 771
Query: 327 ---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F++SVCWR G+ TLVA S G + +
Sbjct: 772 DSAQFITSVCWR--GQSS-TLVAANSTGNVKIL 801
>gi|348577823|ref|XP_003474683.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Cavia porcellus]
Length = 954
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 166/303 (54%), Gaps = 26/303 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 567 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 620
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 621 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 676
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 677 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 731
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 732 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 791
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 792 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 849
Query: 333 CWR 335
CWR
Sbjct: 850 CWR 852
>gi|218197299|gb|EEC79726.1| hypothetical protein OsI_21053 [Oryza sativa Indica Group]
Length = 1144
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 174/341 (51%), Gaps = 45/341 (13%)
Query: 38 NAAVSDSIGVI---EFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKV 89
NA + +S VI FD + FA G+++KI+I+ ++L D +P++ + SK
Sbjct: 824 NADILNSPNVICSLSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLIEMPSKSK- 882
Query: 90 CDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD 149
LS + W L S DYDG V +D + EH +R WSV
Sbjct: 883 ----------LSCVCWNSYIKN-YLASTDYDGTVQLWDASSGQGFTQFTEHR-KRAWSVS 930
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
+S+ DP ASGSDD +++W + C T++ A+ VCCV+F P+ S ++A G
Sbjct: 931 FSEVDPTKLASGSDDCCVKVWS--INQKNCTDTIRNVAN---VCCVQFSPYSSRMLAFGS 985
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR---- 265
AD K Y YD+R P GH K V+Y+RFLD +TL++A TD LK+W++N +
Sbjct: 986 ADYKIYCYDLRNTRIPWCTISGHGKAVSYVRFLDPETLISASTDNTLKIWDLNRTNSSGL 1045
Query: 266 ----VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EP 318
T GH N +NFVGLSV H G + CGSE N+VF Y + P+ H F +P
Sbjct: 1046 STDACSMTLSGHTNEKNFVGLSV--HDGYITCGSENNEVFSYYKTFPMPITSHKFGSIDP 1103
Query: 319 VTAAGS---ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+T + + FVSSVCWR +VA S G + V
Sbjct: 1104 ITGQETNDDNQQFVSSVCWRGRSN---MVVAANSTGSIKVL 1141
>gi|359489834|ref|XP_002276685.2| PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like [Vitis vinifera]
Length = 1072
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 179/351 (50%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HP 79
F +R T+ + N+A + + FD A G+++KI+I+ ++L D +P
Sbjct: 744 FEVRGTLRNGDLLNSA--NVTCSLSFDRDQDYIAAAGVSKKIKIFEFDALLNDSVDIHYP 801
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
VV + + SK LS + W L S DYDGVV +D + E
Sbjct: 802 VVEMSNKSK-----------LSCVCWN-NYIKNYLASTDYDGVVQMWDASTGEGFSQYTE 849
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S DP ASGSDD ++++W + ST+ A+ VCCV+F
Sbjct: 850 HQ-KRAWSVDFSPVDPTKFASGSDDCSVKLW--HINERNSTSTIWNPAN---VCCVQFSA 903
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
+ + L+ G AD K Y YD+R P V GH+K V+Y++FLD +TLV+A TD LKLW
Sbjct: 904 YSTHLLVFGSADYKIYGYDLRHTRIPWCVLAGHQKAVSYVKFLDSETLVSASTDNTLKLW 963
Query: 260 NVNDSRV--------IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++N + + T+ GH N +NFVGLSV G + CGSETN+V+ Y PV
Sbjct: 964 DLNKTNLDGLSSNACTLTFTGHTNEKNFVGLSVL--DGYIACGSETNEVYTYHRSLPMPV 1021
Query: 312 WVHDF---EPVTA---AGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
H F +P+T FVSSVCWR ++ +VA S G + +
Sbjct: 1022 TSHKFGSIDPITEHEIVDDNGQFVSSVCWR---QNSNMVVAANSSGRIKLL 1069
>gi|224114936|ref|XP_002316897.1| predicted protein [Populus trichocarpa]
gi|222859962|gb|EEE97509.1| predicted protein [Populus trichocarpa]
Length = 851
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 182/331 (54%), Gaps = 47/331 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + I FD FAT G+ +KI+++ +++ + +PVV +V SK
Sbjct: 549 SNLVCSISFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVCRSK-------- 600
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSS+ W + L S +++GVV +D+ + + E EH RRVWSVD+S DP
Sbjct: 601 ---LSSICWNSYIKSQ-LASSNFEGVVQVWDVTRSQVVTEMREHE-RRVWSVDFSSADPT 655
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASGSDDG+ G + +++ A+ +CCV+F S +A G AD + Y
Sbjct: 656 MLASGSDDGS----------GVSIGSIKTKAN---ICCVQFPLDSSCSIAFGSADHRIYY 702
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--DSRVI----RTY 270
YD+R P+ GH KTV+Y++F+D+ LV+A TD LKLW+++ SRVI +++
Sbjct: 703 YDLRNSKVPLCTLIGHNKTVSYVKFVDMTNLVSASTDNTLKLWDLSMGTSRVIDSPVQSF 762
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSE-- 325
GH+N +NFVGLSV G + GSETN+VFVY + PV F +P++ +
Sbjct: 763 TGHMNAKNFVGLSV--ADGYIATGSETNEVFVYHKAFPMPVLSFKFNNTDPLSGHEMDDT 820
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SSVCWR G+ TLVA S G + +
Sbjct: 821 AQFISSVCWR--GQSS-TLVAANSTGNIKIL 848
>gi|297809331|ref|XP_002872549.1| hypothetical protein ARALYDRAFT_911432 [Arabidopsis lyrata subsp.
lyrata]
gi|297318386|gb|EFH48808.1| hypothetical protein ARALYDRAFT_911432 [Arabidopsis lyrata subsp.
lyrata]
Length = 1032
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 175/336 (52%), Gaps = 42/336 (12%)
Query: 40 AVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYI 94
+ S+ I + FD + F T G+++KI+IY S+ + +P V + + SK
Sbjct: 717 STSNVICSLGFDRDEDYFVTAGVSKKIKIYEFNSLFNESVDIHYPAVEMPNRSK------ 770
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
LS + W L S DYDG+V +D+ I EH +R WSVD+S+
Sbjct: 771 -----LSGVCWNNYIRN-YLASSDYDGIVKLWDVTTGQAISHFIEHE-KRAWSVDFSEAC 823
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
P ASGSDD ++++W+ + C+ T++ A+ VCCV+F P S L+A G +D +
Sbjct: 824 PTKLASGSDDCSVKLWN--INERNCLGTIRNIAN---VCCVQFSPQSSHLLAFGSSDFRT 878
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--------V 266
Y YD+R + P + GH K V+Y +FLD +TLVTA TD LKLW++ +
Sbjct: 879 YCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNAC 938
Query: 267 IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAG 323
T+ GH N +NFVGLS G + CGSETN+V+ Y P+ + F +P++
Sbjct: 939 SLTFGGHTNEKNFVGLST--SDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPISGKE 996
Query: 324 SERG---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
E FVSSVCWR+ +V+ S+G + V
Sbjct: 997 IEEDNNLFVSSVCWRKRSN---MVVSASSNGSIKVL 1029
>gi|91077676|ref|XP_974586.1| PREDICTED: similar to E3 ubiquitin-ligase protein COP1 [Tribolium
castaneum]
gi|270001535|gb|EEZ97982.1| hypothetical protein TcasGA2_TC000377 [Tribolium castaneum]
Length = 662
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 177/319 (55%), Gaps = 25/319 (7%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD + A G+ +KI++++ +V+ D VD C + + +K+S +
Sbjct: 359 VSSIEFDKDNEFLAIAGVTKKIKVFDYGAVIKD-----TVDIHYPC-IEMLSKSKISCVS 412
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W +L S DY+G V +D EH +R WSVD+++ D L ASGSDD
Sbjct: 413 WNTYHKS-ILASSDYEGTVTIWDASTGQRTKTYQEHE-KRCWSVDFNEVDTRLIASGSDD 470
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
++++ +G ++T++ A+ VCCV+F+P S +A G AD + YD+R M +
Sbjct: 471 ARVKLYS--LNGEHSIATLEAKAN---VCCVKFNPRSSCHLAFGSADHCVHYYDLRNMKE 525
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
V VF GH+K V+Y++FL+ + +V+A TD LKLWNVN +R++ GH+N +NF+GL+
Sbjct: 526 AVAVFKGHKKAVSYVKFLNSEDIVSASTDSQLKLWNVNTPYCLRSFVGHINEKNFIGLAT 585
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA-GSER------GFVSSVCWRRV 337
G + CGSE N +++Y + ++ + FE + ER FVS+VCW+
Sbjct: 586 --DGDYVACGSENNAMYIYYKGLSKKLFSYKFEAIQGVLDQERREDDMNEFVSAVCWK-- 641
Query: 338 GEDECTLVAGGSDGLLHVF 356
++ +VA S G++++
Sbjct: 642 -QNSNVVVAANSQGIINIL 659
>gi|413948534|gb|AFW81183.1| hypothetical protein ZEAMMB73_790006 [Zea mays]
Length = 1121
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 174/341 (51%), Gaps = 47/341 (13%)
Query: 35 SSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKV 89
SSPN S + FD + FA G+++KI+I+ ++L D +P+V + SK
Sbjct: 806 SSPNVICS-----LSFDRDEEYFAAAGVSKKIKIFEFDALLNDRVDIHYPLVEMPSKSK- 859
Query: 90 CDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD 149
LS + W L S DYDG V +D + EH +R WSV
Sbjct: 860 ----------LSCVCWNSYIKN-YLASTDYDGTVQLWDAGSGQGFTQFTEHR-KRAWSVS 907
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
+S+ DP ASGSDD +++W + + T++ A+ VCCV+F P+ S ++A G
Sbjct: 908 FSQVDPTKLASGSDDCCVKVWS--INQKNSIDTIRNVAN---VCCVQFSPYSSRMLAFGS 962
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR---- 265
AD K Y YD+R P GH K V+Y+RFLD +TL++A TD LK+W++N +
Sbjct: 963 ADYKIYCYDLRNTRIPWCTISGHGKAVSYVRFLDPETLISASTDNTLKIWDLNQTNCSGL 1022
Query: 266 ----VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EP 318
T GH N +NFVGLSV H G + CGSETN+VF Y + P+ H F +P
Sbjct: 1023 SADSCSLTLNGHSNEKNFVGLSV--HDGYITCGSETNEVFSYYKDFPMPITSHRFGSIDP 1080
Query: 319 VTAAGS---ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+T + + FVSSVCWR +VA S G + V
Sbjct: 1081 ITGQVTNEDNQQFVSSVCWRGKSN---MVVAANSSGSIKVL 1118
>gi|356540404|ref|XP_003538679.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max]
Length = 1103
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 179/351 (50%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIK-----SVLVDHP 79
F +R + ++ N A + I + FD FA+ GI++KI+I+ SV + +P
Sbjct: 775 FEVRGVLRNADFNNPA--NVICSLSFDRDADYFASAGISKKIKIFEFSALCNDSVDIHYP 832
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
V + + SK LS + W L S DYDG+V +D + E
Sbjct: 833 AVEMSNRSK-----------LSCVCWNNYIKN-YLASTDYDGIVKLWDASTGQEFSQFTE 880
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S P ASGSDD T+++W C+ T++ A+ VCCV+F
Sbjct: 881 HE-KRAWSVDFSAVCPTKFASGSDDCTVKLWS--ISERNCLGTIRNVAN---VCCVQFSA 934
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
S L+A G AD Y YD+R + P V GHRK V+Y++FLD +TLV+A TD LK+W
Sbjct: 935 HSSHLLAFGSADYSTYCYDLRNLRSPWCVLAGHRKAVSYVKFLDSETLVSASTDNTLKIW 994
Query: 260 NVNDSRVI--------RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++N + + T GH N +NFVGLSV G + CGSETN+++ Y P+
Sbjct: 995 DLNKTSPVGASINACSLTLSGHTNEKNFVGLSVA--DGYIACGSETNEIYTYYRSLPMPI 1052
Query: 312 WVHDF---EPVTAAGSER---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
H F +P++ ++ FVSSVCWR + L+A S G + V
Sbjct: 1053 TSHKFGSIDPISGKDTDDDNGQFVSSVCWRGKSD---MLIAANSSGCVKVL 1100
>gi|384246880|gb|EIE20368.1| WD40 repeat-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 349
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 166/332 (50%), Gaps = 34/332 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + I FD D FAT G++R+I++Y VL + V H + + + +KLS
Sbjct: 32 ADMLCSISFDRDDEYFATAGVSRRIKVYATSDVLESNSAV----HCPRLE--MASRSKLS 85
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ W +L + DYDG + +D E +EH +RVWS D+S+ DP SG
Sbjct: 86 CVVWNSYIK-HLLLAADYDGCLALWDAETNTCTATFEEHA-KRVWSADFSQSDPTRFVSG 143
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDDGT+++W R + V +++ VC V+F P S L+A G A+ + Y YD+R+
Sbjct: 144 SDDGTVRLWSIREEAPTAVID-----AKANVCSVQFSPVSSHLLAFGSANYRVYLYDLRQ 198
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV---------NDSRVIRTYKG 272
M P+ V H K V+Y+R++D LV+A TD LKLW++ + R G
Sbjct: 199 MRVPLAVIGCHSKAVSYVRWMDGSHLVSASTDNQLKLWDLAGAGRHSRHQEWRPQNVLTG 258
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA--------AGS 324
H N RNFVGLSV G + CGSE N V+ Y P+ H F A
Sbjct: 259 HTNERNFVGLSV-TSDGYIACGSEDNSVYTYTSTLPTPLARHCFSSKEGCADSGEDLAAD 317
Query: 325 ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVSSVCW R G TL+A S G L +
Sbjct: 318 SHQFVSSVCWSRKGH---TLLAANSQGTLKLL 346
>gi|356527668|ref|XP_003532430.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max]
Length = 1012
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 183/351 (52%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HP 79
F +R + ++ N A + I + FD + FA GI++KI+I+ ++ D +P
Sbjct: 684 FEVRGILRNTDFNNPA--NVICSLSFDRDEDYFAAAGISKKIKIFEFNALFNDSIDIHYP 741
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
VV + + S+ LS + W L S DYDG V +D E
Sbjct: 742 VVEMSNRSR-----------LSCVCWNNYIQN-YLASTDYDGAVKLWDANTGQGFSRFTE 789
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S P ASGSDD ++++W+ + ++T++ A+ VCCV+F
Sbjct: 790 HE-KRAWSVDFSLLCPTKFASGSDDCSVKLWN--INEKNSLATIRNVAN---VCCVQFST 843
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
S L+A G AD AY YD+R + +P V GHRK V+Y++FLD +TLV+A TD LK+W
Sbjct: 844 HSSHLLAFGSADYSAYCYDLRNLRNPWCVLAGHRKAVSYVKFLDSETLVSASTDNMLKIW 903
Query: 260 NVNDSRVI--------RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++N + + T GH N +NFVGLSV G + CGSETN+V+VY PV
Sbjct: 904 DLNKTSPVGPSTSACSLTLSGHTNEKNFVGLSVA--DGYIACGSETNEVYVYHKSLPMPV 961
Query: 312 WVHDF---EPVTAAGSERG---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
H F +P++ ++ FVSSVCWR + +VA S G + V
Sbjct: 962 TSHRFGSIDPISGEETDDDNGLFVSSVCWRGKSD---MVVAANSSGCIKVL 1009
>gi|302784374|ref|XP_002973959.1| hypothetical protein SELMODRAFT_451299 [Selaginella moellendorffii]
gi|300158291|gb|EFJ24914.1| hypothetical protein SELMODRAFT_451299 [Selaginella moellendorffii]
Length = 634
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/333 (34%), Positives = 177/333 (53%), Gaps = 38/333 (11%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIK-----SVLVDHPVVAVVDHSKVCDYYIC 95
+ +SI ++FDP D F T ++ +R++ S++V +P + +
Sbjct: 321 IGNSIRSLDFDPGDEFFVTASVSGYLRVFEFPKAVRWSLVVWNPSLELQ----------- 369
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T KLS + W S + + DYDG++ +D+ DEH RR+WSVD+S +P
Sbjct: 370 TGKKLSCVSWD-KFSKSCVATSDYDGIIKIWDISACQNTVNYDEHE-RRIWSVDFSPMEP 427
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
SG DDG +++W V TV+ A+ +C V F+P S+LV AG AD Y
Sbjct: 428 SRLVSGGDDGKVKLWSKELKTS--VLTVEVKAN---ICSVTFNPISSNLVGAGSADHCIY 482
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV---NDSRVIRTYKG 272
YD+R+ P+ +F GH K V+Y++F + +V+A TDG L+LW++ N +++ Y+G
Sbjct: 483 YYDLRQTKCPLHLFKGHEKAVSYVKFTPSNEMVSASTDGTLRLWSLESWNTVSILQVYRG 542
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD----VRWG---EPVWVHDFEPVTAAGSE 325
H N +NFVGLSV + CGSETN+V+VY V + +P H F AA +
Sbjct: 543 HTNEKNFVGLSV--TSDYIACGSETNEVYVYHKVSPVMFQGIPKPALSHLFARKDAADDD 600
Query: 326 -RGFVSSVCWRRVGEDECTLVAGGSDGLLHVFV 357
R FVS+VCWRR D T++A S G + +
Sbjct: 601 TRPFVSAVCWRR--SDSHTMLAASSQGEIRALM 631
>gi|255537717|ref|XP_002509925.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223549824|gb|EEF51312.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 1044
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HP 79
F +R + + N+A + I + FD FAT G+++KI+I+ S+L D +P
Sbjct: 716 FEVRGLLRTGDFNNSA--NVICSLSFDRDMDYFATAGVSKKIKIFEFNSLLNDSVDIHYP 773
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
V+ + + SK LS + W L S DYDGVV +D +++ +E
Sbjct: 774 VIEMSNKSK-----------LSCICWNTYIKN-YLASTDYDGVVKLWDANTGQGVYQYNE 821
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H RR WSVD+S+ P ASG DD T+++W + + T++ A+ VCCV+F
Sbjct: 822 HE-RRAWSVDFSQVYPTKLASGGDDCTVKLWS--INEKNSLGTIRNIAN---VCCVQFSC 875
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
+ L+A G AD + Y YD+R + P V GH K V+Y++FLD TLVTA TD LKLW
Sbjct: 876 HSTHLLAFGSADYRTYCYDLRNVRTPWCVLAGHDKAVSYVKFLDRGTLVTASTDNSLKLW 935
Query: 260 NVN--------DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++N ++ T GH N +NFVGLSV G + CGSETN+V+ Y P+
Sbjct: 936 DLNKASSSGLSNNACTLTLSGHTNEKNFVGLSVA--DGYIACGSETNEVYAYHRSLPVPI 993
Query: 312 WVHDF---EPVTAAGSER---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
H F +P++ ++ FVSSV WR + L+A S G + V
Sbjct: 994 TSHKFGSIDPISGKETDDDNGQFVSSVSWRGKSD---MLIAANSTGCIKVL 1041
>gi|356511456|ref|XP_003524442.1| PREDICTED: protein SPA1-RELATED 2-like [Glycine max]
Length = 852
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 180/351 (51%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HP 79
F +R V ++ N A + I + FD + FA GI++KI+I+ ++ D +P
Sbjct: 524 FEVRGIVRNTDFNNPA--NVICSLSFDRDEDYFAAAGISKKIKIFEFNALFNDSIDIHYP 581
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
VV + + S+ LS + W L S DYDG V +D E
Sbjct: 582 VVEMSNRSR-----------LSCVCWNNYIQN-YLASTDYDGAVKLWDANTGQGFSGFTE 629
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S P SGSDD ++++W + K ++T++ A+ VCCV+F
Sbjct: 630 HE-KRAWSVDFSLVCPTKFVSGSDDCSVKLWS--INEKKSLATIRNVAN---VCCVQFST 683
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
S L+A G AD AY YD+R + P V GHRK V+Y++FLD +TLV+A TD LK+W
Sbjct: 684 HSSHLLAFGSADYSAYCYDLRNLRSPWCVLAGHRKAVSYVKFLDSETLVSASTDNMLKIW 743
Query: 260 NVNDSRVI--------RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++N + + T GH N +NFVGLSV G + CGSETN+VF Y PV
Sbjct: 744 DLNKTSPVGLSTSACSLTLSGHTNEKNFVGLSV--ADGYIACGSETNEVFAYYKSLPMPV 801
Query: 312 WVHDF---EPVTAAGSERG---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
H F +P++ ++ FVSSVCWR E ++A S G + V
Sbjct: 802 TSHRFGSIDPISGKETDVDNGLFVSSVCWR---EKSDMVIAANSSGCIKVL 849
>gi|297745400|emb|CBI40480.3| unnamed protein product [Vitis vinifera]
Length = 804
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 179/351 (50%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HP 79
F +R T+ + N+A + + FD A G+++KI+I+ ++L D +P
Sbjct: 476 FEVRGTLRNGDLLNSA--NVTCSLSFDRDQDYIAAAGVSKKIKIFEFDALLNDSVDIHYP 533
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
VV + + SK LS + W L S DYDGVV +D + E
Sbjct: 534 VVEMSNKSK-----------LSCVCWNNYIKN-YLASTDYDGVVQMWDASTGEGFSQYTE 581
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S DP ASGSDD ++++W + + T+ A+ VCCV+F
Sbjct: 582 HQ-KRAWSVDFSPVDPTKFASGSDDCSVKLW--HINEACSLFTIWNPAN---VCCVQFSA 635
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
+ + L+ G AD K Y YD+R P V GH+K V+Y++FLD +TLV+A TD LKLW
Sbjct: 636 YSTHLLVFGSADYKIYGYDLRHTRIPWCVLAGHQKAVSYVKFLDSETLVSASTDNTLKLW 695
Query: 260 NVNDSRV--------IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++N + + T+ GH N +NFVGLSV G + CGSETN+V+ Y PV
Sbjct: 696 DLNKTNLDGLSSNACTLTFTGHTNEKNFVGLSVL--DGYIACGSETNEVYTYHRSLPMPV 753
Query: 312 WVHDF---EPVTA---AGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
H F +P+T FVSSVCWR ++ +VA S G + +
Sbjct: 754 TSHKFGSIDPITEHEIVDDNGQFVSSVCWR---QNSNMVVAANSSGRIKLL 801
>gi|297834396|ref|XP_002885080.1| hypothetical protein ARALYDRAFT_897813 [Arabidopsis lyrata subsp.
lyrata]
gi|297330920|gb|EFH61339.1| hypothetical protein ARALYDRAFT_897813 [Arabidopsis lyrata subsp.
lyrata]
Length = 837
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/331 (36%), Positives = 176/331 (53%), Gaps = 47/331 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+I+ S++ + +PVV + SK
Sbjct: 534 SNLVCALAFDRDGEFFATAGVNKKIKIFECNSIVNNNRDIHYPVVELAGRSK-------- 585
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSSL W ++ S ++DGVV +D+ + + E EH +RVWS+D S DP
Sbjct: 586 ---LSSLCWNSYIKSQI-ASSNFDGVVQIWDVARCQLVTEMKEHR-KRVWSIDISSADPT 640
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGSDDGT G + T++ A+ VCCV+F +A G AD K Y
Sbjct: 641 LLASGSDDGT----------GVSIGTIKTKAN---VCCVQFPSDSGRSLAFGSADHKVYY 687
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN------DSRVIRTY 270
YD+R P+ GH KTV+Y++F+D TLV++ TD LKLW+++ + + ++
Sbjct: 688 YDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINETPLHSF 747
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV-TAAGSE---- 325
GH N +NFVGLSV G + GSETN+VFVY + PV + F + +G E
Sbjct: 748 TGHTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSVSGLEVDDA 805
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SS+CWR G+ TLVA S+G + +
Sbjct: 806 SQFISSICWR--GQS-STLVAANSNGNIKIL 833
>gi|384249757|gb|EIE23238.1| WD40 repeat-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 266
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 149/277 (53%), Gaps = 18/277 (6%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSV----LVDHPVVAVVDHSKVCDYYICTP 97
+D + +EF P S+ A+ G+A++IR+Y + S+ PV A H P
Sbjct: 1 ADIVCSVEFSPDGSLLASAGVAKQIRVYPLASIRNGEYDPEPVAAAFIHR--------LP 52
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+K+SS+ W P G VL GDYDGVV + + I + DEH GRRVWSV +S P L
Sbjct: 53 SKMSSVAWSPFDEG-VLTVGDYDGVVAQVHIPSGHLIADVDEHAGRRVWSVAHSTLRPHL 111
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
AS SDDG+ ++W R G S V R+A+C V F +A AD AY +
Sbjct: 112 CASASDDGSARIWAGR--GLAEASGVITLPRRAAICGVSFCADDEHALALAGADCCAYVF 169
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDS---RVIRTYKGHV 274
D+R P+ V +GHR+ V++ RF+ D LVTA D L LW++ + R Y+GH
Sbjct: 170 DLRNTSSPLQVLEGHRRPVSFARFMGRDRLVTASVDSSLALWSLTGGAAPTLFRCYRGHA 229
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
N++NFVGLSV L+ CGSE+ + Y W +PV
Sbjct: 230 NHKNFVGLSVRAQDELIACGSESGAAYAYHRAWSKPV 266
>gi|356545455|ref|XP_003541158.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
Length = 788
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 182/331 (54%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+++ + + + +PVV +V S
Sbjct: 478 SNLVCSLSFDRDAEYFATAGVNKKIKVFECNTTINEDRDIHYPVVEMVSRST-------- 529
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSS W ++ S +++GVV +D+ + E EH +RVWS+D+S DP
Sbjct: 530 ---LSSTCWNTYIKSQI-ASSNFEGVVQLWDVTRSHVQSEMREHE-QRVWSIDFSSADPT 584
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGSDDG++++W+ + G V T++ A+ VCCV+F + +A G AD + Y
Sbjct: 585 LLASGSDDGSVKLWN--INQGISVGTIKTKAN---VCCVQFPLEFAHSLAFGSADHRIYY 639
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--DSRV----IRTY 270
YD+R + P+ GH KTV+YI+F+D +LV+A TD LKLW+++ SRV I+++
Sbjct: 640 YDLRNLKVPLCTLVGHDKTVSYIKFVDTMSLVSASTDNTLKLWDLSLCASRVIDSPIQSF 699
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPV--TAAGSE 325
GH+N +NFVGLSV G + GSETN+VF+Y + P F +P+
Sbjct: 700 TGHMNVKNFVGLSV--SDGYIATGSETNEVFIYHKAFPMPALSFKFYSSDPLFGNEEDDS 757
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F++SVCWR G+ TL+A S G + +
Sbjct: 758 TQFITSVCWR--GQSS-TLLAANSTGNVKIL 785
>gi|241167385|ref|XP_002410055.1| ubiquitin ligase Cop1, putative [Ixodes scapularis]
gi|215494716|gb|EEC04357.1| ubiquitin ligase Cop1, putative [Ixodes scapularis]
Length = 602
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 174/331 (52%), Gaps = 37/331 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD + FA G+ +KI+++ +V+ D +VD + +C +K+S +
Sbjct: 285 VSSIEFDKDNEFFAIAGVTKKIKVFEYGTVIQD-----IVDIHYPVNEMMCN-SKISCIS 338
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W G +L S DY+G V +D +KV +F+ E +R WSVD++K D L ASGS
Sbjct: 339 WSSYHKG-MLASSDYEGTVTIWDAFTGQKVKMFQEHE---KRCWSVDFNKVDTKLIASGS 394
Query: 163 DDG-----TMQ----MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
DD T+Q +W D ++ +++ VCCV+F+P +A G AD
Sbjct: 395 DDAKGKLETIQDRIILWSIASD-----HSITSLEAKANVCCVKFNPESRFHLALGSADHC 449
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ YD+R P+ VF GH+K V+Y++FL+ LV+A TD LKLWN+N+ +R++KGH
Sbjct: 450 VHYYDLRSTKQPLGVFKGHKKAVSYVKFLNTTELVSASTDSQLKLWNINNPHCLRSFKGH 509
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV-------TAAGSER 326
+N +NFVGL+ G + CGSE N +++Y + V F+ V
Sbjct: 510 LNEKNFVGLAT--DGDYVACGSENNALYIYYKGLSKQVLTFRFDVVRNILEKDKKEEDSN 567
Query: 327 GFVSSVCWRRVGEDECT--LVAGGSDGLLHV 355
FVS+VCWR V +VA S G + V
Sbjct: 568 EFVSAVCWRIVSGPLANDVVVAANSQGTIKV 598
>gi|118485594|gb|ABK94648.1| unknown [Populus trichocarpa]
Length = 389
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 172/333 (51%), Gaps = 46/333 (13%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICTPAK 99
+ + FD + A G+++KI+++ ++L D +P V + + SK+
Sbjct: 79 VCTLSFDRDEDYIAAAGVSKKIKVFEFGALLNDSIDIHYPTVEMSNKSKI---------- 128
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
SS+ W L S DYDGVV +D + EH +R WSVD+S DP++ A
Sbjct: 129 -SSVCWNNYIK-NYLASTDYDGVVQMWDAGTGQIFSQYTEHQ-KRAWSVDFSLADPMMFA 185
Query: 160 SGSDDGTMQMW--DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
SGSDD ++++W + R G T+ A+ VCCV+F P ++L+ G AD K Y Y
Sbjct: 186 SGSDDCSVKLWSINERSSFG----TIGNPAN---VCCVQFSPSSTNLLVFGSADYKVYCY 238
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--------DSRVIRT 269
D+R P GH KTV+Y++FLD +TLV+A TD LKLW++N S T
Sbjct: 239 DLRHTKIPWCTLAGHGKTVSYVKFLDSETLVSASTDNTLKLWDLNKTSSTGVSSSACSLT 298
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSER 326
+ GH N +NFVGLS G + CGSETN+V+ Y P+ H F +PV+
Sbjct: 299 FGGHTNEKNFVGLSAL--DGYIACGSETNEVYCYYRSLPMPITSHKFGCVDPVSGNEIVD 356
Query: 327 G---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
G FVSSVCWRR +VA S G + V
Sbjct: 357 GGGQFVSSVCWRRKSN---MVVAANSSGNMKVL 386
>gi|297742304|emb|CBI34453.3| unnamed protein product [Vitis vinifera]
Length = 799
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 182/351 (51%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HP 79
F +R + + N+A + I + FD + A G+++KI+I+ ++ D +P
Sbjct: 471 FEVRGILRNGDFINSA--NVICSLSFDRDEDYLAAAGVSKKIKIFEFHALFNDSVDIHYP 528
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
V+ + + SK LS + W L S DYDGVV +D + + +
Sbjct: 529 VIEMTNKSK-----------LSCICWNNYIKN-YLASTDYDGVVKLWDASTGQGLSQYID 576
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S+ DP ASGSDD ++++W + C+ T++ A+ VCCV+F
Sbjct: 577 HQ-KRAWSVDFSRVDPKKLASGSDDCSVKLWS--INEKNCLGTIRNIAN---VCCVQFSA 630
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
S L+A G AD K Y YD+R P + GH K V+Y++FLD +TLV+A TD LK+W
Sbjct: 631 HSSHLLAFGSADYKTYCYDLRNAKSPWCILAGHDKAVSYVKFLDAETLVSASTDNSLKIW 690
Query: 260 NVNDSRVI--------RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++N + T GH N +NFVGLSV G + CGSETN+V+ Y P+
Sbjct: 691 DLNQTSSTGLSMNACSLTLSGHTNEKNFVGLSV--ADGYVTCGSETNEVYAYHRSLPMPI 748
Query: 312 WVHDF---EPVTAAGSER---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
H F +P++ ++ FVSSVCWR G+ +VA S G + V
Sbjct: 749 TSHKFGSIDPISGKETDDDNGQFVSSVCWR--GKSN-MVVAANSTGCIKVL 796
>gi|345496707|ref|XP_003427793.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Nasonia
vitripennis]
Length = 675
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 174/327 (53%), Gaps = 40/327 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICTPAK 99
+ IEFD + FA G+ ++I++++ +V+ + +P V + SK+
Sbjct: 371 VSSIEFDKDNEFFAIAGVTKRIKVFDYNTVIRGTVDLHYPCVEMTSSSKI---------- 420
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVL 157
S + W G VL S DY+G V +D ++ F E +R WS+D++ D L
Sbjct: 421 -SCVSWNSFHKG-VLASSDYEGTVTVWDAMTGQRTKAFHEHE---KRCWSIDFNDVDTRL 475
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGSDD +++W D +V +++ VCCV+F+P S +A G AD + Y
Sbjct: 476 IASGSDDARVKLWSLNMDH-----SVASLEAKANVCCVKFNPRSSCHLAFGSADHCVHYY 530
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
D+R M + + +F GH+K V+Y++F++ +V+A TD LK+WN+N+ +R++ GHVN +
Sbjct: 531 DLRNMKEALCIFKGHKKAVSYVKFVNEQEIVSASTDSQLKMWNINNPYCLRSFVGHVNEK 590
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSER--------GFV 329
NFVGL+ G + CGSE N ++VY + ++ + F+ + + FV
Sbjct: 591 NFVGLAT--DGDYVACGSENNALYVYYKGLTKQLFSYKFDAAKSILETQEKREEDLNEFV 648
Query: 330 SSVCWRRVGEDECTLVAGGSDGLLHVF 356
S+VCWR ++ +VA S G++ +
Sbjct: 649 SAVCWR---QNSNVVVAANSQGIIKIL 672
>gi|356560290|ref|XP_003548426.1| PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like [Glycine max]
Length = 1023
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 172/330 (52%), Gaps = 43/330 (13%)
Query: 47 VIEFDPSDSVFATGGIARKIRIYNIK-----SVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+ FD + A GG+++KI+I+++ SV + +PV+ + + SK LS
Sbjct: 714 ALSFDRDEDHIAAGGVSKKIKIFDLNAIASDSVDIQYPVIEMSNKSK-----------LS 762
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ W L S DYDG V +D + P+ + EH +R WSV +S DP + ASG
Sbjct: 763 CVCWNTYIKNH-LASTDYDGAVQMWDADTGQPLSQYMEHQ-KRAWSVHFSLSDPKMFASG 820
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD ++++W + T+ A+ +CCV+F + ++L+ G AD K Y YD+R
Sbjct: 821 SDDCSVKLWS--ISERNSLGTIWKPAN---ICCVQFSAYSTNLLFFGSADYKVYGYDLRH 875
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--------VIRTYKGH 273
P GH K V+Y++F+D + +V+A TD LKLW++N + T+KGH
Sbjct: 876 TRIPWCTLAGHGKAVSYVKFIDSEAVVSASTDNSLKLWDLNKTSSSGLSSDACAMTFKGH 935
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV------TAAGSERG 327
N +NFVGLSV G + CGSE+N+V+ Y P+ H FE + +G G
Sbjct: 936 SNEKNFVGLSVL--DGYIACGSESNEVYCYHKSLPVPIATHKFESIDHISGHLNSGDNNG 993
Query: 328 -FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVSSVCWR+ LVA S G++ +
Sbjct: 994 QFVSSVCWRKKSN---MLVAANSVGIVKLL 1020
>gi|145351732|ref|XP_001420221.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580454|gb|ABO98514.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 308
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 173/321 (53%), Gaps = 37/321 (11%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+D +FAT G ++ I +Y +V+ V P V HSKV S+L
Sbjct: 9 WDRDGELFATAGTSKSICVYETSAVMTLGARVHCPAVEFEAHSKV-----------SALC 57
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P + + SGDY GVV +D++K+ +E H RRVWS+D+S DP AS SDD
Sbjct: 58 YNPYVK-QSIASGDYQGVVQLWDVQKETSTWENTTHR-RRVWSIDFSHIDPTKLASASDD 115
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
GT++++ G C T+Q +R+ VC V+FHP + ++A G AD + + YD+R+
Sbjct: 116 GTVRIFSTTTKEGVC--TLQ---NRANVCSVKFHPTSAHMLAIGSADHRIHVYDLRQPST 170
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV--NDSRV--IRTYKGHVNNRNFV 280
P++ GHRK V+Y+ ++ D LV+A TD LKLW++ ND R +RTY GH N +NFV
Sbjct: 171 PLMTLQGHRKAVSYVHWVG-DELVSASTDNTLKLWDIKRNDPRTACVRTYVGHTNEKNFV 229
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSER---GFVSSVCWR 335
GLS G + CGSE N V VY PV + F +P + + R GF+SSV W
Sbjct: 230 GLST-NADGYIACGSEDNIVHVYAKHASSPVAHYGFADKPTPMSHNRRDKGGFISSVVW- 287
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
+ L+A S G L +
Sbjct: 288 --SPNSKHLLAANSRGHLKIL 306
>gi|359473903|ref|XP_002271391.2| PREDICTED: protein SPA1-RELATED 2-like, partial [Vitis vinifera]
Length = 1054
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 180/351 (51%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HP 79
F +R + + N+A + I + FD + A G+++KI+I+ ++ D +P
Sbjct: 726 FEVRGILRNGDFINSA--NVICSLSFDRDEDYLAAAGVSKKIKIFEFHALFNDSVDIHYP 783
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
V+ + + SK LS + W L S DYDGVV +D + + +
Sbjct: 784 VIEMTNKSK-----------LSCICWNNYIKN-YLASTDYDGVVKLWDASTGQGLSQYID 831
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S+ DP ASGSDD ++++W + C+ T++ A+ VCCV+F
Sbjct: 832 HQ-KRAWSVDFSRVDPKKLASGSDDCSVKLWS--INEKNCLGTIRNIAN---VCCVQFSA 885
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
S L+A G AD K Y YD+R P + GH K V+Y++FLD +TLV+A TD LK+W
Sbjct: 886 HSSHLLAFGSADYKTYCYDLRNAKSPWCILAGHDKAVSYVKFLDAETLVSASTDNSLKIW 945
Query: 260 NVNDSRVI--------RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++N + T GH N +NFVGLSV G + CGSETN+V+ Y P+
Sbjct: 946 DLNQTSSTGLSMNACSLTLSGHTNEKNFVGLSV--ADGYVTCGSETNEVYAYHRSLPMPI 1003
Query: 312 WVHDF---EPVTAAGSER---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
H F +P++ ++ FVSSVCWR +VA S G + V
Sbjct: 1004 TSHKFGSIDPISGKETDDDNGQFVSSVCWRGKSN---MVVAANSTGCIKVL 1051
>gi|321456923|gb|EFX68020.1| hypothetical protein DAPPUDRAFT_330505 [Daphnia pulex]
Length = 690
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 176/334 (52%), Gaps = 45/334 (13%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICTPAK 99
+ IEFD FA G+ ++I++Y+ V+ D +PV+ +V SK+
Sbjct: 377 VSSIEFDRDADFFAIAGVTKRIKVYDYAVVVRDAVDLHYPVMEMVAGSKI---------- 426
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVL 157
S + W VL S DY+G V +D ++ +F+ E +R WSVD+++ D L
Sbjct: 427 -SCISW-SAYHKSVLASSDYEGSVSVWDASVGTRLRVFQEHE---KRCWSVDFNRMDSHL 481
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGSDD +++W + V+T++ A+ VCCV+F+P+ +A G AD +
Sbjct: 482 MASGSDDSRVKIWS--LNAEHSVATLEAKAN---VCCVKFNPYSRYCLAYGAADHCVHYV 536
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
D+R+ +P+ VF GHRK V+Y++FL LV+A TD LKLW V D+ R+++GH N +
Sbjct: 537 DLRQPKEPLRVFKGHRKAVSYVKFLSDRELVSASTDSQLKLWTVEDNVSCRSFRGHTNEK 596
Query: 278 NFVGLSVW-----RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA---GSERG-- 327
NFVGLS L+ CGSE N +++Y +P+ + F+ V +A ER
Sbjct: 597 NFVGLSTTDGSQDDRRDLIACGSENNALYLYSKGLSQPLLHYRFDVVKSALLLDKERAEQ 656
Query: 328 -----FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVS+VCW+ D +VA S G + +
Sbjct: 657 EESAEFVSAVCWK---PDSNVIVAANSQGTIKIL 687
>gi|402590836|gb|EJW84766.1| hypothetical protein WUBG_04318 [Wuchereria bancrofti]
Length = 432
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 172/331 (51%), Gaps = 45/331 (13%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICTPAK 99
+ IEFD F G+A++I++Y +SV+ + +PV + CT +K
Sbjct: 125 VSSIEFDKDGEFFILAGVAKRIKVYEFQSVIENTDTLHYPVTQLQ----------CT-SK 173
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEK-------KVPIFERDEHGGRRVWSVDYSK 152
+S++ W P L S DYDG V +D + +E + +R W+V ++
Sbjct: 174 ISNVSWNPYCKN-TLASSDYDGTVQLWDTSLARSIRPGNIAFYEHE----KRCWTVVFNS 228
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
DP L ASGSDD +++W D + V+T+ + VCCV F P + + G AD
Sbjct: 229 VDPHLMASGSDDARVKLWSVGVD--RSVATIDAKVN---VCCVCFSPTQRNYLVFGSADH 283
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+ YD+R+ ++PV VF GHRK V+Y+++ + +V+A TD L+LW+V + IRT KG
Sbjct: 284 CIHLYDIRRPIEPVNVFRGHRKAVSYVKYCTENEVVSASTDSNLRLWDVGSGKCIRTMKG 343
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-------EPVTAAGSE 325
H N RNFVGL+ G + CGSE N +++Y +P+ +DF + A S
Sbjct: 344 HQNERNFVGLAT--DGNHIVCGSENNHLYLYHKGLCDPLMCYDFGRADNTRSALLATDSS 401
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVS+V W++ + +VA S G HVF
Sbjct: 402 SDFVSAVSWKK---NSNIVVAANSQGTTHVF 429
>gi|221119584|ref|XP_002164501.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like, partial [Hydra
magnipapillata]
Length = 301
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 169/318 (53%), Gaps = 29/318 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
IEFD FA G+ +KI+++ +L D + H C+ +K+S + W
Sbjct: 1 IEFDRDCDYFAIAGVTKKIKVFEYGQILRDVVDIHYPVHEMTCN------SKISCISWSQ 54
Query: 108 GTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
G +L S DY+G+V +D + +F+ E +R WSVD++ DP L ASGSDD
Sbjct: 55 YHKG-MLASSDYEGIVTIWDAFTGTQTQVFQEHE---KRCWSVDFNIVDPNLIASGSDDA 110
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
+++W + V+T++ A+ VCCV+F+P VA G AD + YD+R
Sbjct: 111 KVKLWATNMEHS--VATLEAKAN---VCCVKFNPTSRYNVAFGSADHCIHYYDLRNPKRS 165
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+ V GHRK V+Y +FLD + +V+A TD LKLW+VN+++ +RTY GH N +NFVGL+
Sbjct: 166 LSVLKGHRKAVSYAKFLDGNQIVSASTDSQLKLWDVNNAQCLRTYTGHSNEKNFVGLAT- 224
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA-------AGSERGFVSSVCWRRVG 338
+G + CGSE N +F Y + + + F+ + FVS+VCW+
Sbjct: 225 -NGDYIACGSENNSLFCYYKGVSKQLVTYKFDTIHGPLDKEKRVEESNEFVSAVCWKPGS 283
Query: 339 EDECTLVAGGSDGLLHVF 356
+VA S GL++V
Sbjct: 284 N---VIVAANSQGLINVL 298
>gi|224053801|ref|XP_002297986.1| predicted protein [Populus trichocarpa]
gi|222845244|gb|EEE82791.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 168/326 (51%), Gaps = 38/326 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICTPAK 99
I + FD FA G+++KI+I+ S+ D +PV+ + + SK
Sbjct: 411 ICSLSFDRDADYFAAAGVSKKIKIFEFDSLFNDSVDIHYPVIEMSNESK----------- 459
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
LS + W + +G YDGVV +D+ +F+ EH +R WSVD+S+ P A
Sbjct: 460 LSCICWNSYIKSYLASTG-YDGVVKLWDVNTGQVVFQYKEHE-KRAWSVDFSQVYPTKLA 517
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASR--SAVCCVEFHPFGSSLVAAGCADKKAYAY 217
SGSDD ++++W + S R + VCCV+F + L+A G AD + Y Y
Sbjct: 518 SGSDDCSVKLWSINEAFQTFLQKNSTSTIRNIANVCCVQFSSHSTHLLAFGSADYRTYCY 577
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND--------SRVIRT 269
D+R + P V GH K V+Y++FLD +TLVTA TD LK+W++N S T
Sbjct: 578 DLRNVRAPWCVLSGHDKAVSYVKFLDSETLVTASTDNTLKIWDLNKTSSSGLSPSACSLT 637
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSE- 325
GH N +NFVGLSV G + CGSETN+V+ Y P+ H F +P++ ++
Sbjct: 638 LGGHTNEKNFVGLSV--ANGYIACGSETNEVYAYHRSLPMPITSHKFGSIDPISGKETDC 695
Query: 326 --RGFVSSVCWRRVGEDECTLVAGGS 349
FVSSVCWR G+ + + A S
Sbjct: 696 DNGQFVSSVCWR--GKSDMVVAANSS 719
>gi|224130490|ref|XP_002320850.1| predicted protein [Populus trichocarpa]
gi|222861623|gb|EEE99165.1| predicted protein [Populus trichocarpa]
Length = 965
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 170/333 (51%), Gaps = 39/333 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICTPAK 99
+ + FD + A G+++KI+++ ++L D +P V + + SK+
Sbjct: 648 VCTLSFDRDEDYIAAAGVSKKIKVFEFGALLNDSIDIHYPTVEMSNKSKI---------- 697
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
SS+ W L S DYDGVV +D + EH +R WSVD+S DP++ A
Sbjct: 698 -SSVCWN-NYIKNYLASTDYDGVVQMWDAGTGQIFSQYTEHQ-KRAWSVDFSLADPMMFA 754
Query: 160 SGSDDGTMQMW--DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
SGSDD ++++W + C + + + VCCV+F P ++L+ G AD K Y Y
Sbjct: 755 SGSDDCSVKLWSINEACFLLYHSISFGTIGNPANVCCVQFSPSSTNLLVFGSADYKVYCY 814
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--------DSRVIRT 269
D+R P GH KTV+Y++FLD +TLV+A TD LKLW++N S T
Sbjct: 815 DLRHTKIPWCTLAGHGKTVSYVKFLDSETLVSASTDNTLKLWDLNKTSSTGVSSSACSLT 874
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSER 326
+ GH N +NFVGLS G + CGSETN+V+ Y P+ H F +PV+
Sbjct: 875 FGGHTNEKNFVGLSAL--DGYIACGSETNEVYCYYRSLPMPITSHKFGCVDPVSGNEIVD 932
Query: 327 G---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
G FVSSVCWRR +VA S G + V
Sbjct: 933 GGGQFVSSVCWRRKSN---MVVAANSSGNMKVL 962
>gi|320166226|gb|EFW43125.1| photoregulatory zinc-finger protein COP1 [Capsaspora owczarzaki
ATCC 30864]
Length = 731
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 166/333 (49%), Gaps = 52/333 (15%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKS------VLVDHPVVAV-VDHSKVCDYYI 94
S I IEFD + VF+T G+ +KI+I++ ++ V V +PV+ + ++H
Sbjct: 410 SSIISSIEFDKDEKVFSTAGVQKKIKIFDFETFANTTYVDVHYPVLEITLEH-------- 461
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSK 152
K+SS W P VL DY G V +D+ + + IF+ E +R W+VD+++
Sbjct: 462 ----KISSQSWNPFMQS-VLAVSDYSGAVGLWDVNTGQNLRIFQEHE---KRAWTVDFAQ 513
Query: 153 GDPVLGASGSDDG------------TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
DP ASGSDD + +W ++ PS VC V+F+P
Sbjct: 514 TDPTRLASGSDDSRVCVFVWSLFVVEVLIWSTTA-AQSMLNITTPSN----VCTVKFNPV 568
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWN 260
S+ + AG AD Y +D+R P VF H K V+Y++FL+ VTA TD LKLWN
Sbjct: 569 NSNEILAGSADHSVYLFDLRNTKQPARVFQSHSKAVSYVKFLNSSDFVTASTDSTLKLWN 628
Query: 261 VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE--- 317
VN+ +++RT+ GH N RNFVGL+ + + CGSE N V VY P H F+
Sbjct: 629 VNNGQLLRTFSGHTNERNFVGLTT--NSQFIACGSEKNAVVVYYKSISHPAIEHRFDYEG 686
Query: 318 --PVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
P + R FV +VC+R G+ L A
Sbjct: 687 APPQNDQDTSR-FVCAVCFR--GQSNLLLCANS 716
>gi|340374691|ref|XP_003385871.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Amphimedon
queenslandica]
Length = 616
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 172/324 (53%), Gaps = 39/324 (12%)
Query: 49 EFDPSDSVFATGGIARKIRIYNIKSVL-------VDHPVVAVVDHSKVCDYYICTPAKLS 101
EFD FA GG+ +K++I++ +V + +PV + H AK+S
Sbjct: 313 EFDKDGDFFAVGGVTKKVKIFDYNTVTEARMFPTIHYPVREIPCH-----------AKIS 361
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P + L + DYDG + +D + EH +RVWSV Y++ D L A+G
Sbjct: 362 SVAYSPYIKPQ-LATSDYDGTLSIWDCHQMKCTRNYQEHE-KRVWSVSYNQYDTSLLATG 419
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
DD +++W + G+ V V A+ VC V F P +A G AD D+RK
Sbjct: 420 GDDCCLKLW--HLEVGQSVQCVPTLAN---VCSVRFQPKNKYTLAYGSADHIIRIADIRK 474
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ +P+++ GH+K V+Y++FL+ LV+A TD LKLW+++ +RT+KGHVN++NFVG
Sbjct: 475 LNEPLMLLHGHKKAVSYVQFLNEKELVSASTDSELKLWSIDTGCCLRTFKGHVNDKNFVG 534
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE-------PVTAAGSERG--FVSSV 332
LSV + G + CGSE N +VY +P+ + F+ V S+ G FVS+V
Sbjct: 535 LSV--NNGYITCGSENNSFYVYQKFVSKPILNYKFQISRNILPSVNEQRSDEGSEFVSAV 592
Query: 333 CWRRVGEDECTLVAGGSDGLLHVF 356
C R+ D ++VA S G + V
Sbjct: 593 CSRK---DSSSIVAANSQGFIKVL 613
>gi|170586954|ref|XP_001898244.1| hypothetical protein [Brugia malayi]
gi|158594639|gb|EDP33223.1| conserved hypothetical protein [Brugia malayi]
Length = 598
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 174/344 (50%), Gaps = 58/344 (16%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICTPAK 99
+ IEFD F G+A++I++Y +SV+ + +PV + CT +K
Sbjct: 278 VSSIEFDKDGEYFILAGVAKRIKVYEFQSVIENTDTLHYPVTQLQ----------CT-SK 326
Query: 100 LSSLKWKPGTSGRVLGSGDYDG--------------------VVMEYDLEKKVPIFERDE 139
+S++ W P L S DYDG +++ Y L + +E +
Sbjct: 327 ISNVSWNPYCKN-TLASSDYDGTVQLWDTSLAKSIRRYQINFILIRYKLAGNIAFYEHE- 384
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
+R W+V ++ DP L ASGSDD +++W D + V+T+ + VCCV F P
Sbjct: 385 ---KRCWTVVFNSVDPHLMASGSDDARVKLWSIGVD--RSVATIDAKVN---VCCVCFSP 436
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
+ + G AD + YD+R+ ++PV VF GHRK V+Y+++ + +V+A TD L+LW
Sbjct: 437 TQRNYLVFGSADHCIHLYDIRRPIEPVNVFRGHRKAVSYVKYCTENEVVSASTDSNLRLW 496
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--- 316
+V + IRT KGH N RNFVGL+ G + CGSE N +++Y +P+ +DF
Sbjct: 497 DVGSGKCIRTMKGHQNERNFVGLAT--DGNHIVCGSENNHLYLYHKGLCDPLMCYDFGRA 554
Query: 317 ----EPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ A S FVS+V W++ + +VA S G HVF
Sbjct: 555 DNTRSALLATDSSSDFVSAVSWKK---NSNIVVAANSQGTTHVF 595
>gi|224075074|ref|XP_002304547.1| predicted protein [Populus trichocarpa]
gi|222841979|gb|EEE79526.1| predicted protein [Populus trichocarpa]
Length = 1020
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 180/351 (51%), Gaps = 52/351 (14%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HP 79
F +R + + N+A + I + FD FA GG+++KI+I++ S+ D +P
Sbjct: 700 FEVRGLLRTGDFSNSA--NVICSLSFDRDADYFAAGGVSKKIKIFDFNSIFNDPVDIHYP 757
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
V+ + + SK LS + W + +G YDGVV +D+ +F+ +E
Sbjct: 758 VIEMSNESK-----------LSCICWNSYIKNYLASTG-YDGVVKLWDVSTGQGVFQYNE 805
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S+ P ASGSDD + +ST++ A+ VCCV+F
Sbjct: 806 HE-KRAWSVDFSQVCPTKLASGSDDCS----------KNSISTIRNIAN---VCCVQFSS 851
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
+ L+A G AD + Y YD+R P V GH K V+Y++FLD +TLVTA TD LK+W
Sbjct: 852 HSTHLLAFGSADYRTYCYDLRNCRAPWCVLAGHDKAVSYVKFLDSETLVTASTDNSLKIW 911
Query: 260 NVNDSRV--------IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++N + I T GH N +NFVGLSV + CGSETN+VF Y P+
Sbjct: 912 DLNKTSSSSSSVSACIVTLGGHTNEKNFVGLSVA--NDYITCGSETNEVFAYHRSLPMPI 969
Query: 312 WVHDF---EPVTAAGSERG---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
H F +P++ ++ FVSSVCWR + +VA S G L V
Sbjct: 970 TSHKFGSIDPISGKETDDDNGLFVSSVCWRGKSD---MVVAANSSGCLKVL 1017
>gi|356522530|ref|XP_003529899.1| PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like [Glycine max]
Length = 1035
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 176/330 (53%), Gaps = 45/330 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIK-----SVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ FD + A GG+++KI+I+++ SV + +PVV + + SK LS
Sbjct: 727 LSFDRDEDHIAAGGVSKKIKIFDLNAISSDSVDIQYPVVEMSNKSK-----------LSC 775
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ W P L S DYDGVV +D + P+ + EH +R WSV +S DP + ASGS
Sbjct: 776 VCWNPYIKNH-LASTDYDGVVQMWDADTGQPLSQYMEHQ-KRAWSVHFSLSDPKMFASGS 833
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD ++++W+ + T+ A+ +CCV+F + ++ + G AD K Y YD+R
Sbjct: 834 DDCSVKLWN--ISERNSLGTIWNPAN---ICCVQFSAYSTNHLFFGSADYKVYGYDLRHT 888
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV---------NDSRVIRTYKGH 273
P GH KTV+Y++F+D + +V+A TD LKLW++ +D+ + T+KGH
Sbjct: 889 RIPWCTLTGHGKTVSYVKFIDAEAVVSASTDNSLKLWDLKKISSSGLSSDACAV-TFKGH 947
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV------TAAGSERG 327
N +NFVGLSV G + GSE+N+V+ Y P+ H FE V +G G
Sbjct: 948 SNEKNFVGLSVL--DGYIAWGSESNEVYCYHKSLPVPIATHKFESVDPISGHLNSGDNNG 1005
Query: 328 -FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVSSVCWR+ LVA S G++ +
Sbjct: 1006 QFVSSVCWRKKSN---MLVAANSVGIVKLL 1032
>gi|328767564|gb|EGF77613.1| hypothetical protein BATDEDRAFT_13928 [Batrachochytrium
dendrobatidis JAM81]
Length = 279
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 158/285 (55%), Gaps = 31/285 (10%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
+ + +K+S L + +L S DY+GVV +D V + DEH +R WSVD+S
Sbjct: 1 MSSRSKISCLSYNAYIKPYLLSS-DYEGVVTLWDASMGVALLALDEHE-KRTWSVDFSTT 58
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
DP+ ASGSDD +++W + + + V T++ S++ +C V+FHP S +A G AD
Sbjct: 59 DPMRIASGSDDTRVKLW--QANQKRSVLTIE---SKANICSVKFHPSFSHHLAFGSADHH 113
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRV------- 266
+ YD+R P+ VF GHRK V+Y++F++ + +V+A TD L+LW++ +S
Sbjct: 114 VHYYDLRNSSTPLHVFKGHRKAVSYVKFMNDNEMVSASTDCSLRLWSLKESMAGSSTDIR 173
Query: 267 -------IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--- 316
R+Y GH N +NFVGLSV G + CGSETN+V+ Y + +PV H F
Sbjct: 174 GRSQSVFARSYSGHTNEKNFVGLSVNCDGEFIACGSETNEVYTYFSKLSKPVLTHHFGSM 233
Query: 317 -EPVTAAGSERG----FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ VT A + FVSS+CW+R + LVA S G + V
Sbjct: 234 IDSVTGAPNPHADPSLFVSSMCWKRKTPN--ILVAANSQGRVKVL 276
>gi|302143897|emb|CBI22758.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 116/166 (69%), Gaps = 28/166 (16%)
Query: 1 MSNFHDH---QQPQAETTN------------ERARCEWDFNLRTTVSSSSSPNAAVSDSI 45
M NF Q P+ E N ERARC+W+FNL T V+SSS+ A +D+I
Sbjct: 1 MKNFSTQFNPQSPEVENPNIQEEKAEQHIEEERARCDWEFNLSTVVTSSST--GASTDTI 58
Query: 46 GVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKW 105
GVIEFDPSD++ ATGGIARKIR+Y+ K V + H+ CDYY+CTPAKLSSL+W
Sbjct: 59 GVIEFDPSDNLVATGGIARKIRVYSRK--------VTWLQHNDACDYYVCTPAKLSSLRW 110
Query: 106 KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG---RRVWSV 148
KPG++GRVLGSGDYDGVV EYDL++K+PIFERDEHG R+WS+
Sbjct: 111 KPGSAGRVLGSGDYDGVVTEYDLDQKIPIFERDEHGTDGCLRLWSM 156
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 115/207 (55%), Gaps = 36/207 (17%)
Query: 173 RCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCADKKAYAYDVR-------- 220
RCD +STV S+S A + +EF P +LVA G +K Y +
Sbjct: 35 RCDWEFNLSTVVTSSSTGASTDTIGVIEFDP-SDNLVATGGIARKIRVYSRKVTWLQHND 93
Query: 221 ----KMVDPVLVFDGHRKTVTYIRFL---DVDTLVTA---------------GTDGCLKL 258
+ P + K + R L D D +VT GTDGCL+L
Sbjct: 94 ACDYYVCTPAKLSSLRWKPGSAGRVLGSGDYDGVVTEYDLDQKIPIFERDEHGTDGCLRL 153
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
W+++D+R+IR Y GH+N R+FVGLSVWR GGLLGCGSE N VFVYD RWGEP+WVH+F
Sbjct: 154 WSMHDARMIRVYMGHMNTRSFVGLSVWRTGGLLGCGSENNHVFVYDKRWGEPIWVHEFGV 213
Query: 319 VTAAGSERGFVSSVCWRRV-GEDECTL 344
+ G + FVSSVCWR+V GED CTL
Sbjct: 214 GSRDGRDPNFVSSVCWRQVGGEDGCTL 240
>gi|413951136|gb|AFW83785.1| hypothetical protein ZEAMMB73_750611 [Zea mays]
Length = 812
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 179/351 (50%), Gaps = 57/351 (16%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----PVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+++ ++ +H PVV + + SK
Sbjct: 480 SNLVCSVGFDRDREFFATAGVNKKIKVFEYNMIVNEHRDIHYPVVEMSNRSK-------- 531
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W + S D++G+V +D+ + EH RRVWSVD+S DP
Sbjct: 532 ---LSCICWNSYMKSHI-ASSDFEGIVQVWDVTRSQVFVGMREHE-RRVWSVDFSIVDPT 586
Query: 157 LGASGSDDGTMQMWDPR--------------------CDGGKCVSTVQPSASRSAVCCVE 196
SGSDDG++++WD + + T++ +R+ VC V+
Sbjct: 587 KLVSGSDDGSVKLWDMNQAILFLHLLYVRLLTNDNMVIELAGSIGTIR---TRANVCSVQ 643
Query: 197 FHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCL 256
F P + +A G AD K Y YD+R + P GH KTV+Y+++LD T+++A TD L
Sbjct: 644 FQPDTARSIAIGSADHKIYCYDLRNIRAPYCTLVGHTKTVSYVKYLDASTILSASTDNSL 703
Query: 257 KLWNV--NDSRVI----RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
KLW++ N R+I +T+ GH N +NFVGLS+ G + GSETN+VFVY + P
Sbjct: 704 KLWDLSMNPGRIIDSPVQTFTGHTNTKNFVGLSI--SDGYIATGSETNEVFVYHKEFPMP 761
Query: 311 VWVHDF---EPVTAA--GSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
V + F +P++ + F+S VCWR G+ TL++ S G + +
Sbjct: 762 VLAYKFSVTDPISGQEIDDQSQFISCVCWR--GQSS-TLLSANSSGNIKIL 809
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 167/325 (51%), Gaps = 37/325 (11%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+D +FAT G +R I +Y +V+ V P V + KV K S
Sbjct: 575 WDRDGELFATAGTSRSICVYEADAVMKLGARVHCPAVEFEANDKVSSLCFNHYVKQS--- 631
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ SGDY GVV +D+ K+V +E + H RRVWS+D+S DP ASGSDD
Sbjct: 632 ---------IASGDYQGVVQLWDVHKEVSTWENNTHR-RRVWSLDFSSIDPTKLASGSDD 681
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
GT++++ C T+Q A+ VC V FHP L+A G A+ K + YD+R++ +
Sbjct: 682 GTVRVFSTTTKEATC--TIQNHAN---VCSVRFHPTAPHLLAIGSANHKIHCYDLRQLNN 736
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNNRNFV 280
P+L GHRK V+Y+ ++ D L++A TD LKLW+V + +RTY GH N +NFV
Sbjct: 737 PLLTLQGHRKAVSYVYWVG-DELLSASTDNTLKLWDVKRNNPQTACVRTYTGHTNEKNFV 795
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE----PVTAAGSER-GFVSSVCWR 335
GLS G + CGSE N V +Y PV + F PVT ++ GF+SSV W
Sbjct: 796 GLSA-NADGYIACGSEDNVVHLYAKHSSVPVSSYSFSDKPAPVTQHRRDKAGFISSVVW- 853
Query: 336 RVGEDECTLVAGGSDGLLHVFVGKK 360
D L+A S G L + K
Sbjct: 854 --SPDSKHLLAANSKGHLKILALSK 876
>gi|347970796|ref|XP_003436639.1| AGAP013233-PA [Anopheles gambiae str. PEST]
gi|333466835|gb|EGK96393.1| AGAP013233-PA [Anopheles gambiae str. PEST]
Length = 817
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 181/357 (50%), Gaps = 60/357 (16%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
VS + IEFD FA G+ ++I+I++ + + D A VD + + C +K+
Sbjct: 477 VSTIVSSIEFDKDSEYFAIAGVTKRIKIFDYYTAIRD----AAVDINYPINEMTCN-SKI 531
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S + W +VL S DY+G+V +D+ + +EH +R W VD+++ D L AS
Sbjct: 532 SCVIWN-SYFKQVLASSDYEGIVTIWDVLTRTRTKTFEEHD-KRCWCVDFNEVDTRLLAS 589
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDD +++W D V+T++ +R+ VCCV+F+P S +A G AD YD+R
Sbjct: 590 GSDDARVKLWSLNVDHS--VATIE---ARANVCCVKFNPKSSCHLAFGTADHCVNYYDLR 644
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRV-IRTYKGHVNNRNF 279
+ P+ +F GHRK V+Y++FL+ D +V+A TDG LKLWN+N +R++ GH+N +NF
Sbjct: 645 NLKQPLCLFKGHRKAVSYVKFLNTDEIVSASTDGQLKLWNINSPPFCLRSFTGHINEKNF 704
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW--------------------------- 312
GL+ + L CGSE N + VY + ++
Sbjct: 705 AGLAT--NNDYLACGSEDNSLCVYYKGLSKQLFNLKFSSSSTSGSGGAGGSSAAGTGSSS 762
Query: 313 -------------VHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
D E + G+E FVS+VCWR+ ++AG S+G++ +
Sbjct: 763 GIGNSSSRTSGLQSTDMERSNSEGNE--FVSAVCWRKQSN---IIIAGNSEGVIKIL 814
>gi|303272107|ref|XP_003055415.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463389|gb|EEH60667.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 669
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 173/342 (50%), Gaps = 35/342 (10%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL--VDHPVVAVVDHSKVCDYYICT 96
A S + IEFD + FATGG+++K+ +++ VD A + +
Sbjct: 335 AGASSIVSSIEFDRDYANFATGGVSKKVHVFSFAEACGGVDGDRAASDVDAPGPIQTLDA 394
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+KLS L + + L S DY+GVV +D+E V + E +EH +R W+VDY + DP
Sbjct: 395 KSKLSCLSYNKHVANH-LASSDYEGVVTVWDVEAGVAVAEFEEHD-KRAWTVDYCRVDPR 452
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASGSDDG +++W G +V R+ VCCV++ P + +A G AD + +
Sbjct: 453 ILASGSDDGLVKIWSTAQRG-----SVLEIDVRANVCCVQYGPLSAHQLAVGSADHRVHV 507
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVN----------DSR 265
+D+R + + HRK V+Y+RFL D +V+A TD L +W+V S
Sbjct: 508 FDLRNPSEAIATLRAHRKAVSYVRFLPTGDEMVSASTDSTLCVWDVKGNVAAGYGILSSA 567
Query: 266 VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT----- 320
T +GHVN +NFVGLSV G L+ CGSETN+ +VY + P+ +DF T
Sbjct: 568 PAATLEGHVNEKNFVGLSVGA-GELIACGSETNEAYVYHKSFNRPILTYDFAEKTERRGG 626
Query: 321 ------AAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
S FVS+ CWR DE L+A S G + V
Sbjct: 627 GGGGGGGGDSGPLFVSATCWR---GDEPVLLAANSTGSIKVL 665
>gi|390363653|ref|XP_001192151.2| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like, partial
[Strongylocentrotus purpuratus]
Length = 290
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 151/272 (55%), Gaps = 15/272 (5%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
IEFD + FA G+ +KI+++ +V++D + H C+ +K+S + W
Sbjct: 30 IEFDKDNDFFAIAGVTKKIKVFEYGTVIMDAVDIHYPVHEMACN------SKISCVAWSA 83
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G VL S DY+G V +D V EH +R WS+D+++ DP L ASGSDD +
Sbjct: 84 YHKG-VLASSDYEGTVTLWDAFAGVKTQSFQEHE-KRCWSIDFNRMDPKLLASGSDDAKV 141
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W + ++ +++ VCCV+F+P +A G AD + YD+R P+
Sbjct: 142 KLWSTNQE-----QSITSLEAKANVCCVKFNPTKMYGLAFGSADHCVHYYDLRHPKQPLN 196
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
VF GHRK V+Y +F++ + +V+A TD LKLWNV+ +RT++GH+N +NFVGL+ +
Sbjct: 197 VFKGHRKAVSYTKFVNSEEIVSASTDSQLKLWNVDKPHCLRTFRGHINEKNFVGLT--SN 254
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV 319
+ CGSE N +FV+ + + F+ V
Sbjct: 255 DDYIACGSENNSLFVFYKGLSKQILTFKFDTV 286
>gi|391342898|ref|XP_003745752.1| PREDICTED: ubiquitin-protein ligase E3B-like [Metaseiulus
occidentalis]
Length = 1671
Score = 174 bits (442), Expect = 5e-41, Method: Composition-based stats.
Identities = 101/298 (33%), Positives = 156/298 (52%), Gaps = 23/298 (7%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD + FA G+ +KI+++ SV+ + H VC+ +K+S +
Sbjct: 335 VSSIEFDKDNEYFAIAGVTKKIKMFEYSSVIRSDVEMHYPIHEMVCN------SKISCIS 388
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W G +L DY+G V +D + ++ EH +R WSVD++K D L ASGSDD
Sbjct: 389 WNTYNKG-MLACSDYEGTVTLWDAYRSQKLWVYQEHE-KRCWSVDFNKVDTKLLASGSDD 446
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W + V +++ A+ VCCV F+P +A G AD + YD+R
Sbjct: 447 TKVKLW--AINEQHSVGSIEAKAN---VCCVRFNPDSKYHLAMGSADHCVHYYDLRNCKQ 501
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ VF GH+K V+Y++FL+ LV+A TD LKLW +D + +R++ GHVN +NFVGL+
Sbjct: 502 SLGVFKGHKKAVSYVKFLNSKELVSASTDSQLKLWRTDDPQCLRSFTGHVNEKNFVGLAT 561
Query: 285 WRHGGLLGCGSETNQVFVY--DVRWGEPVWVHDFEPVT------AAGSERGFVSSVCW 334
G + CGSE N +++Y + W P A+ FVS+VCW
Sbjct: 562 --DGDYIACGSENNALYIYYKGISTQFQTWSFRNSPSPREDGPGASHENSEFVSAVCW 617
>gi|432097690|gb|ELK27802.1| E3 ubiquitin-protein ligase RFWD2 [Myotis davidii]
Length = 695
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 171/322 (53%), Gaps = 33/322 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 369 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 422
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 423 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 478
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 479 S------VKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 527
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 528 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGIPYCLRSFKGHINEKNF 587
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 588 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 645
Query: 333 CWRRVGEDECT-LVAGGSDGLL 353
CWR + + E L+A S G +
Sbjct: 646 CWRALPDGESNVLIAANSQGTI 667
>gi|196000046|ref|XP_002109891.1| hypothetical protein TRIADDRAFT_21397 [Trichoplax adhaerens]
gi|190588015|gb|EDV28057.1| hypothetical protein TRIADDRAFT_21397 [Trichoplax adhaerens]
Length = 659
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 163/318 (51%), Gaps = 25/318 (7%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI+I+ S++ D AV H V + + +K+S +
Sbjct: 334 VSSIEFDRDCDYFAIAGVTKKIKIFEYSSIIRD----AVDIHYPVTE--MTCSSKISCIS 387
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W VL S DY+G V +D V EH +R W VD++K DP L ASGSDD
Sbjct: 388 W-SAYHKEVLASSDYEGTVALWDAFNGVKTRCYQEHE-KRCWCVDFNKVDPKLFASGSDD 445
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W + ++ +++ VCCV+F P +A G AD + YD+R
Sbjct: 446 AKVKLWSTNLEH-----SIASLEAKANVCCVKFSPVSRYHLAFGSADHCVHYYDLRNTSK 500
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ F GHRK V+Y F++ + +V+A TD LKLW++N RT++GH N +NFVGL+
Sbjct: 501 SLADFKGHRKAVSYTNFVNENEIVSASTDSQLKLWDLNVPYCTRTFRGHSNEKNFVGLAT 560
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSVCWRRV 337
G + CGSE N +++Y + + F+ V + + FVS+VCW+RV
Sbjct: 561 --DGDYIACGSENNSLYLYYKGLSKQLLSFKFDVVRSIFDKDSRDDDSNEFVSAVCWKRV 618
Query: 338 GEDECTLVAGGSDGLLHV 355
LVA S G + V
Sbjct: 619 TN---VLVAANSQGTIKV 633
>gi|118344224|ref|NP_001071934.1| zinc finger protein [Ciona intestinalis]
gi|92081586|dbj|BAE93340.1| zinc finger protein [Ciona intestinalis]
Length = 645
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 174/330 (52%), Gaps = 40/330 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL------VDHPVVAVVDHSKVCDYYIC 95
S + I+FD FA G+ +KI++Y+ +SV+ V+ P+V + +SK+
Sbjct: 338 SSIVSSIDFDKDCDHFAVAGVTKKIKVYDYESVVNNVIDGVNCPIVQMACNSKI------ 391
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKG 153
SS+ W L S DY+G V+ +D +K +F+ E +R WSVD++
Sbjct: 392 -----SSISW-SHYHKSWLASSDYEGSVILWDAFTGQKNKVFQEHE---KRCWSVDFNSV 442
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
DP L ASGSDD +++W + V+ ++ A+ VCCV+F+P + +A GCAD
Sbjct: 443 DPRLLASGSDDARVKLWSTGVQ--RSVACIEAKAN---VCCVQFNPHSAFHLAFGCADHF 497
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ YD+R V VF GH+K V+Y +F+D D +V+A TD L+LW + S +R+++GH
Sbjct: 498 VHYYDIRNTKQSVSVFRGHKKAVSYAKFVDKDEIVSASTDSELRLWKTSTSPCVRSFRGH 557
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA-------GSER 326
N++NFVGL+ +G + CGSE N +++Y + + + F V +
Sbjct: 558 TNDKNFVGLAT--NGDYIACGSENNSLYIYYKGLSKSLLTYKFNVVKSVLDREQTDDDSN 615
Query: 327 GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
FVS+V WR + + A S G + +
Sbjct: 616 EFVSAVAWRANSD---IIAAANSQGTIKIL 642
>gi|313217594|emb|CBY38656.1| unnamed protein product [Oikopleura dioica]
gi|313242948|emb|CBY39678.1| unnamed protein product [Oikopleura dioica]
Length = 608
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 172/332 (51%), Gaps = 30/332 (9%)
Query: 35 SSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-PVVAVVDHSKVCDYY 93
S+ N S + I+FD FA G+ +KI+IY+ +V+ + + H C
Sbjct: 294 SNENIQQSSIVSSIDFDCDSDYFAVAGVTKKIKIYDYHNVISNSVSTFHLPIHEMSCQ-- 351
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYS 151
K+S + W + L S DYDG++ +D K+ F+ E +R WSVD++
Sbjct: 352 ----NKISCVVWNKYHKNK-LASSDYDGLISIWDTVSGKQTEKFKEHE---KRCWSVDFN 403
Query: 152 KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD 211
DP + ASGSDD +++W V+T++ A+ VCCV+F+P S VA G AD
Sbjct: 404 TVDPKILASGSDDAKVRIWALGMQNA--VTTIEAKAN---VCCVQFNPHTSMHVAFGSAD 458
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+ YD+R+ P+ +F GH+K V+Y++F D +T+V+A TD LKLW +++
Sbjct: 459 HCVHYYDIRRSDTPLKIFKGHKKAVSYVKFCDANTIVSASTDSQLKLWKCDETSPQFNLS 518
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-------EPVTAAGS 324
GH N RNFVGL+ G + CGSE N ++VY + P+ ++F + +
Sbjct: 519 GHQNERNFVGLAT--DGDYIACGSEDNSLYVYYKGFQSPLMKYEFNLKRSLLNDLQSNRD 576
Query: 325 ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ F+S+V WR TL+A S G++ V
Sbjct: 577 DSQFLSAVAWR---PRSTTLLAANSQGIIKVL 605
>gi|312384230|gb|EFR29000.1| hypothetical protein AND_02381 [Anopheles darlingi]
Length = 1283
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 188/373 (50%), Gaps = 66/373 (17%)
Query: 30 TVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKV 89
T++ S++ N A S + IEFD FA G+ ++I+I++ + + D A VD +
Sbjct: 483 TLNYSNNSNYA-STIVSSIEFDKDSEYFAIAGVTKRIKIFDYYTAIRD----AAVDINYP 537
Query: 90 CDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD 149
+ C +K+S + W +VL S DY+G+V +D+ + +EH +R W VD
Sbjct: 538 INEMTCN-SKISCVIWNTYFK-QVLASSDYEGIVTIWDVVTRTCTKTYEEHD-KRCWCVD 594
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
+++ D L ASGSDD +++W D V+T++ +R+ VCCV+F+P S +A G
Sbjct: 595 FNEVDTRLLASGSDDARVKLWSLNVDHS--VATIE---ARANVCCVKFNPKSSCHLAFGT 649
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRV-IR 268
AD YD+R + P+ VF GHRK V+Y++FL+ D +V+A TDG LKLWN+N +R
Sbjct: 650 ADHCVNYYDLRNLKQPLCVFKGHRKAVSYVKFLNTDEIVSASTDGHLKLWNINSPPFCLR 709
Query: 269 TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW---------------- 312
++ GH+N +NF GL+ + L CGSE N + VY + ++
Sbjct: 710 SFTGHINEKNFAGLAT--NSDYLACGSEDNSLCVYYKGLSKQLFNLKFSSSGSGGSGGTG 767
Query: 313 -----------------------------VHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
D E + G+E FVS+VCWR+
Sbjct: 768 SGSGGGGSGSGTAGAGGSGNGGGRGASLSSSDMERNSTEGNE--FVSAVCWRKQSN---I 822
Query: 344 LVAGGSDGLLHVF 356
++AG S+G++ +
Sbjct: 823 IIAGNSEGVIKIL 835
>gi|255583820|ref|XP_002532662.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223527622|gb|EEF29735.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
Length = 1011
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 165/328 (50%), Gaps = 42/328 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICTPAKLSS 102
+ FD + A GI++KI+++ ++L D +PVV + + SK LS
Sbjct: 704 LSFDRDEEYIAAAGISKKIKVFEFATLLNDSIDIHYPVVEMSNKSK-----------LSC 752
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
L W L S DYDGV+ +D + + EH +R WSVD+S DP + ASGS
Sbjct: 753 LSWNNYIKN-YLASTDYDGVIQMWDAGTGQGLSQYTEHQ-KRAWSVDFSLADPTMFASGS 810
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD ++++W G + T+ A+ +CCV+F + L+A G AD K Y YD+R
Sbjct: 811 DDCSVKLWSINERGS--LGTIWNPAN---ICCVQFSASSTHLLAFGSADYKIYCYDLRHT 865
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWN--------VNDSRVIRTYKGHV 274
P GH K V+Y++FLD +T+V+A TD L+LW+ ++ S T+ GH
Sbjct: 866 RLPWCTLSGHEKAVSYVKFLDSETIVSASTDNTLRLWDLKKTSSTGLSSSACPLTFGGHT 925
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSER------GF 328
N +NFVGLS G + CGSETN+V+ Y P+ + F V + F
Sbjct: 926 NEKNFVGLSTL--DGYIACGSETNEVYCYYRSLPMPITSYKFGYVDPFSGNKMVDDSGQF 983
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLLHVF 356
VSSVCWR+ +VA S G + V
Sbjct: 984 VSSVCWRQKSN---MVVAANSMGNMQVL 1008
>gi|3600059|gb|AAC35546.1| contains similarity to WB domains, G-beta repeats (Pfam:
G-beta.hmm, score: 14.83 and 23.03) [Arabidopsis
thaliana]
Length = 479
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 182/385 (47%), Gaps = 76/385 (19%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHP 79
F R + +S N S+ I + FD + FAT G+++KI+IY S+ + +P
Sbjct: 115 FETRGVLRTSELNN--TSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYP 172
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
+ + + SK LS + W L S DYDG+V +D+ I E
Sbjct: 173 AIEMPNRSK-----------LSGVCWNNYIRN-YLASSDYDGIVKLWDVTTGQAISHFIE 220
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD-----------------PRCDGG----- 177
H +R WSVD+S+ P ASGSDD ++++W+ P G
Sbjct: 221 HE-KRAWSVDFSEACPTKLASGSDDCSVKLWNINEACSSILDFVVLIATPTEISGIYTYE 279
Query: 178 ------------KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
C+ T++ A+ VCCV+F P S L+A G +D + Y YD+R + P
Sbjct: 280 YINSTLDYSVNRNCLGTIRNIAN---VCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTP 336
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--------VIRTYKGHVNNR 277
+ GH K V+Y +FLD +TLVTA TD LKLW++ + T+ GH N +
Sbjct: 337 WCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEK 396
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSERG---FVSS 331
NFVGLS G + CGSETN+V+ Y P+ + F +P++ E FVSS
Sbjct: 397 NFVGLST--SDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSS 454
Query: 332 VCWRRVGEDECTLVAGGSDGLLHVF 356
VCWR+ +V+ S+G + V
Sbjct: 455 VCWRKRSN---MVVSASSNGSIKVL 476
>gi|193785518|dbj|BAG50884.1| unnamed protein product [Homo sapiens]
Length = 265
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 151/269 (56%), Gaps = 21/269 (7%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDP 155
+K+S + W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP
Sbjct: 5 SKISCISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDP 60
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
L ASGSDD +++W D V++++ A+ VCCV+F P +A GCAD +
Sbjct: 61 KLLASGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVH 115
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
YD+R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N
Sbjct: 116 YYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHIN 175
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGF 328
+NFVGL+ +G + CGSE N +++Y + + F+ V + + F
Sbjct: 176 EKNFVGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEF 233
Query: 329 VSSVCWRRVGEDECT-LVAGGSDGLLHVF 356
VS+VCWR + + E L+A S G + V
Sbjct: 234 VSAVCWRALPDGESNVLIAANSQGTIKVL 262
>gi|440790793|gb|ELR12061.1| COP1, putative [Acanthamoeba castellanii str. Neff]
Length = 596
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 170/316 (53%), Gaps = 24/316 (7%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
IEFD FA G ++IR+++ +SV+ A H V + + T ++LS + W
Sbjct: 301 IEFDKEGQHFAVAGYNKRIRVFDYRSVVEG----AGTTHFPVHE--LTTLSRLSCVSWNG 354
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
++ GS +Y G V +DL + + EH +R WSV ++ P S SDD +
Sbjct: 355 YIRSQLAGS-EYSGRVSVWDLNTSQLVCKWHEHE-KRAWSVHFAPTHPTRIVSASDDTKV 412
Query: 168 QMW--DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
++W + R G T++ A+ VC V+FHP +A G AD + + YD R + +P
Sbjct: 413 KLWSMNQRLSAG----TIEVQAN---VCSVKFHPESPHYLAFGAADHQIHYYDARSLREP 465
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+ V GH K V++I+FLD LV+A DG L+LW+VN + + ++ HVN R FVGLSV
Sbjct: 466 LFVLRGHDKAVSHIQFLDSSRLVSASIDGTLRLWDVNTAESLLSFSSHVNKRLFVGLSV- 524
Query: 286 RHGGL-LGCGSETNQVFVYDVRWGEPVWVHDF-EPVTAAGSERGFVSSVCWRRVGEDECT 343
HGG + GSE NQV+ Y + P++ + F E + A +E F+S+VC+++ E
Sbjct: 525 -HGGEWITTGSENNQVYTYHKDFKTPLYQYSFDEAPSTATNEGDFISAVCYQKT---ENV 580
Query: 344 LVAGGSDGLLHVFVGK 359
++A S GL+ K
Sbjct: 581 ILAANSRGLIQALQLK 596
>gi|255070521|ref|XP_002507342.1| E3 ubiquitin-protein ligase COP1 [Micromonas sp. RCC299]
gi|226522617|gb|ACO68600.1| E3 ubiquitin-protein ligase COP1 [Micromonas sp. RCC299]
Length = 827
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 158/306 (51%), Gaps = 34/306 (11%)
Query: 35 SSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYI 94
SS +A + I IE D D FAT G++R I + V + +HS + I
Sbjct: 449 SSNTSASNPIISSIEIDMEDFCFATAGVSRLIHFFRFADVCNGY------EHSGLPAQSI 502
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
T +KLS L + + S DY+GV+ +D+E + E +EHG +R W+VD+ + D
Sbjct: 503 STSSKLSCLSYSKHVQKHI-ASSDYEGVISVWDIEIGSALVEYEEHG-KRAWTVDFCRTD 560
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
P L ASGSDDG +++W V++V R+ VCC ++ P + +A GCAD
Sbjct: 561 PRLLASGSDDGRVKIWST-----NQVASVLELDMRANVCCAQYGPNSAHQLAVGCADHMV 615
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDS--------- 264
+ +D+R +P+ + GHRK V+Y+RFL LV+A TD L +W+V+ S
Sbjct: 616 HLFDLRSPSEPLAILSGHRKAVSYVRFLPSGRELVSASTDSTLCVWDVHQSLARAGHERY 675
Query: 265 ----------RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVH 314
R+ R + GH+N +NFVGLSV + CGSETN+V +Y P+ +
Sbjct: 676 QESNGITTGTRLTRVHDGHINEKNFVGLSVGAE-EYIACGSETNEVILYHKELRRPLARY 734
Query: 315 DFEPVT 320
+F T
Sbjct: 735 NFAEET 740
>gi|307107086|gb|EFN55330.1| hypothetical protein CHLNCDRAFT_57959 [Chlorella variabilis]
Length = 625
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 172/371 (46%), Gaps = 52/371 (14%)
Query: 35 SSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYI 94
S PN D + +EF+ + A+ G+++++R+Y++ S L HP C
Sbjct: 258 SEPNHHRQDMVCALEFEEHGWLLASAGVSKQVRVYSLASCL-QHPGDPAYTQPIRCHRMA 316
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
+KLSSL W P G V DYDGVV + D+E I E DEH GR VWSV +S
Sbjct: 317 ---SKLSSLAWNPDAPGAVT-VADYDGVVSQVDMESGHLIAEADEHAGR-VWSVSHSLQR 371
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
P L AS SDDGT+++W G + A+ + V PF +L A CAD A
Sbjct: 372 PHLCASASDDGTVRLWG--GSGMQACLAALRLAAGAPATGVHLSPFDGNLAAVACADHSA 429
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND----------- 263
Y +D+R+ + GH + V+Y+R+L D LV+A TD L +W++
Sbjct: 430 YVFDLRRTGQVLWQLAGHGRAVSYVRWLGPDRLVSASTDASLAVWHLPGPQQQAGQAAAP 489
Query: 264 ------------SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ R +GH N++NFVGLSV GGL+ CGSE + Y P+
Sbjct: 490 AQQAWQRSGEVLAQPGRRLRGHRNSKNFVGLSVRPEGGLVACGSEAPACYAYSDARSAPL 549
Query: 312 WVHDFEPVTAAGSERG----------------FVSSVCWR----RVGEDECTLVAGGSDG 351
H F P++ G+ F S+VCW+ R+G L A S G
Sbjct: 550 ASHQFAPLSWPGAGPACGSGGAPLDAQPPAGQFCSAVCWQPATARLGGAP-LLAAATSGG 608
Query: 352 LLHVFVGKKKP 362
L V ++ P
Sbjct: 609 DLRVLELRQAP 619
>gi|302786196|ref|XP_002974869.1| hypothetical protein SELMODRAFT_101888 [Selaginella moellendorffii]
gi|300157764|gb|EFJ24389.1| hypothetical protein SELMODRAFT_101888 [Selaginella moellendorffii]
Length = 218
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 132/227 (58%), Gaps = 17/227 (7%)
Query: 134 IFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
I E +EH +R WSVD+++ DP L SGSDDG +++W R + S+V ++ +C
Sbjct: 3 IMEYEEHA-KRAWSVDFARTDPNLLVSGSDDGKLKVWSTRQE-----SSVMGIDMKANIC 56
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTD 253
CV+F+P S+ VA G AD + + YD+R PV F GH+KTV+Y++F+ + LV+A TD
Sbjct: 57 CVKFNPSSSNFVAVGSADHRIHYYDLRSPASPVHTFSGHQKTVSYVKFITPEELVSASTD 116
Query: 254 GCLKLWNVNDSRVIR---TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
L++WNV + + T GH+N RNFVGLS + + CGSETN+VFVY P
Sbjct: 117 STLRIWNVRTNTPVSSLLTLTGHINERNFVGLS--GNSDYVTCGSETNEVFVYHKAISRP 174
Query: 311 VWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFV 357
H F + F+S+VCW+ D TL+A S G + V V
Sbjct: 175 ATRHRFGSL---DDSLHFISAVCWK---SDSPTLLAANSQGTIKVLV 215
>gi|293333135|ref|NP_001170311.1| uncharacterized protein LOC100384276 [Zea mays]
gi|224034979|gb|ACN36565.1| unknown [Zea mays]
Length = 268
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 147/275 (53%), Gaps = 26/275 (9%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
+ +KLS + W L S DYDG V +D + EH +R WSV +S DP
Sbjct: 3 SKSKLSCVCWNNYIKN-YLASTDYDGTVQLWDASSGQGFTQFTEHR-KRTWSVSFSDVDP 60
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
ASGSDD +++W + CV T++ A+ VCCV+F P+ S ++A G AD K Y
Sbjct: 61 TKLASGSDDCCVKVWS--INQKNCVDTIRNVAN---VCCVQFSPYSSRMLAFGSADYKIY 115
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--------VI 267
YD+R P GH K V+Y+RFLD TLV+A TD LK+W++N +
Sbjct: 116 CYDLRNTRIPWCTILGHGKAVSYVRFLDPYTLVSASTDNTLKIWDLNQTNCSGLSTDSCS 175
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGS 324
T GH N +NFVGLSV H G + CGSETN+VF Y + P+ H F +P+T +
Sbjct: 176 LTLNGHTNEKNFVGLSV--HDGYITCGSETNEVFSYYKTFPMPITSHRFGSIDPITGQVT 233
Query: 325 ---ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ FVSSVCWR G+ +VA S G + V
Sbjct: 234 NEDNQQFVSSVCWR--GKSN-MVVAANSSGSIKVL 265
>gi|303271521|ref|XP_003055122.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
gi|226463096|gb|EEH60374.1| response regulator receiver/WD40 domain fusion protein [Micromonas
pusilla CCMP1545]
Length = 1334
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 152/289 (52%), Gaps = 38/289 (13%)
Query: 57 FATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
ATGGI++++R++ + V + H V + I T +KLSSL W P L S
Sbjct: 992 IATGGISKRLRVFEVAVVTE----LGAAVHCPVSE--IKTNSKLSSLAWNPYIK-HGLAS 1044
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDG 176
DYDG V +D ++ V E +EH +R WS+DYS+ DP SGSDDGT+++W
Sbjct: 1045 ADYDGSVHLWDADRGVLTSEFNEHR-KRAWSLDYSQLDPTRLVSGSDDGTVRVWS--ISQ 1101
Query: 177 GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV 236
VS ++ R+ VC V+F P +++VA G AD K YAYD+R P++ GH+K V
Sbjct: 1102 ATSVSCIR---QRANVCSVQFSPVNANVVAFGSADYKIYAYDLRHTSRPLVTLSGHKKAV 1158
Query: 237 TYIRFLDVDTLVTAGTDGCLKLWNVNDSRV------------------------IRTYKG 272
+Y+R++ D +V+A TD LKLW+V V RT++G
Sbjct: 1159 SYVRWMGGDLIVSASTDNTLKLWDVKRGMVGDKNEFASGTGGGLFDPGSERSACSRTFRG 1218
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA 321
H+N +NFVG+SV R G + CGSE N V +Y P+ +A
Sbjct: 1219 HLNQKNFVGMSVARDGH-IACGSEDNTVCLYTRSVPSPITTQSLATCSA 1266
>gi|47216612|emb|CAG10910.1| unnamed protein product [Tetraodon nigroviridis]
Length = 797
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 176/372 (47%), Gaps = 75/372 (20%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI+++ +V+ D + + C+ +K+S
Sbjct: 443 SSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIHYPVNEMTCN------SKIS 496
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D +K +++ E +R WSVD++ DP L A
Sbjct: 497 CISWS-SYHKNLLASSDYEGTVILWDGFTGQKSKVYQEHE---KRCWSVDFNLMDPKLLA 552
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 553 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPTSRYHLAFGCADHCVHYYDL 607
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTA----------------------------- 250
R P++VF GHRK V+Y +F+ + +V+A
Sbjct: 608 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSAQSLSEHNWPLLGPSRVPAHRGKTRGHFYF 667
Query: 251 -------------------GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
TD LKLWNV+ +R++KGH+N +NFVGL+ +G +
Sbjct: 668 CLDQTEMLAWLSSEDDVYRSTDSQLKLWNVSKPHCLRSFKGHINEKNFVGLA--SNGDYI 725
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSVCWRRVGEDECT- 343
CGSE N +++Y + + F+ V + + FVS+VCWR + + E
Sbjct: 726 ACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNV 785
Query: 344 LVAGGSDGLLHV 355
L+A S G + V
Sbjct: 786 LIAANSQGTIKV 797
>gi|56718736|gb|AAW28081.1| COP1-like protein [Solanum lycopersicum]
Length = 120
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 96/124 (77%), Gaps = 4/124 (3%)
Query: 238 YIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSET 297
YIRF+D T+++ DGCLK+WN D +V+RTYKGH N+R FVGLSVW+ GGL+ CGSE
Sbjct: 1 YIRFVDERTIISLSIDGCLKMWNAEDQKVLRTYKGHSNSRRFVGLSVWKPGGLICCGSEN 60
Query: 298 NQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFV 357
NQVFVYD RWGEP+W++ EP E GFVSSVCW++ E++CTLVAG SDG+L VF
Sbjct: 61 NQVFVYDKRWGEPIWMYGREPR----HEHGFVSSVCWQQKDENQCTLVAGDSDGVLRVFN 116
Query: 358 GKKK 361
GK+K
Sbjct: 117 GKRK 120
>gi|384487947|gb|EIE80127.1| hypothetical protein RO3G_04832 [Rhizopus delemar RA 99-880]
Length = 397
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 29/318 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD + FA GGI + I+IY+ + H + I K+S L
Sbjct: 100 VSSIEFDRDEEYFAVGGILKDIKIYDFRLTNRSSDDNQYAMHCPI--RRISCENKISCLS 157
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W + L S DY GV+ +D+ + EH +R WSVD S +P L ASGSDD
Sbjct: 158 WSSYIKSQ-LASADYQGVINVWDVTTGQKMSSFVEHR-KRAWSVDTSPRNPNLLASGSDD 215
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W + + + T Q + +CC +F P + + YD+R
Sbjct: 216 TTVKVWS--LNSQRSLFTFQ---HKGNICCAKFAPNNNHQILC---------YDLRYPSI 261
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
P+ + GH+K V+Y+++L+ + L++A TD LKLWN ++ IRTY GH+N +NFVGLSV
Sbjct: 262 PLYTYQGHQKAVSYVKWLNDNELLSASTDNSLKLWNRESTQCIRTYTGHLNEKNFVGLSV 321
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE------PVTAAGSERGFVSSVCWRRVG 338
+ + CGSETN V+ Y P+ + F +T FVSSVCW++
Sbjct: 322 --NEDWIACGSETNTVYAYHKYSRTPIAKYKFPMDDISGKMTIENDPTYFVSSVCWKK-- 377
Query: 339 EDECTLVAGGSDGLLHVF 356
D L++ S G++ V
Sbjct: 378 -DTSKLISANSKGIIRVL 394
>gi|147836234|emb|CAN64346.1| hypothetical protein VITISV_017786 [Vitis vinifera]
Length = 1795
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 159/280 (56%), Gaps = 33/280 (11%)
Query: 35 SSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYI 94
+SPN S + FD FAT G+ +KI+I+ +L ++ + H V + +
Sbjct: 255 NSPNLVCS-----LSFDRDREFFATAGVNKKIKIFECDMILNENRDI----HYPVTE--M 303
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
+ +KLS + W +++ S D++GVV +D+ + E EH +RVWSVD+S D
Sbjct: 304 ASQSKLSCICWNGYIKNQIVSS-DFEGVVQVWDVSRSQRFMEMKEHE-KRVWSVDFSLAD 361
Query: 155 PVLGASGSDDGTMQMWDPR--------CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
P ASG DDG +++W+ DGG + T++ A+ VCCV+F P + +A
Sbjct: 362 PTKLASGGDDGAVKLWNINQAILFLHLVDGGS-IGTIKTKAN---VCCVQFPPDSARSLA 417
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN--DS 264
G AD K Y YD+R P+ +GH KTV+Y++F++ TLV+A TD LKLW+++ S
Sbjct: 418 IGSADHKVYCYDLRNTRIPLATLNGHSKTVSYVKFINSTTLVSASTDSSLKLWDLSTCTS 477
Query: 265 RV----IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
RV ++T+ GH+N +NFVGLS+ G + GSETN++
Sbjct: 478 RVLDSPLQTFTGHMNVKNFVGLSI--SDGYIATGSETNEI 515
>gi|4850290|emb|CAB43046.1| COP1 like protein [Arabidopsis thaliana]
gi|7267810|emb|CAB81212.1| COP1 like protein [Arabidopsis thaliana]
Length = 1040
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 184/400 (46%), Gaps = 91/400 (22%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHP 79
F R + +S N S+ I + FD + FAT G+++KI+IY S+ + +P
Sbjct: 661 FETRGVLRTSELNN--TSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYP 718
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYD-LEKKVPIFERD 138
+ + + SK LS + W L S DYDG+V ++ L+ V D
Sbjct: 719 AIEMPNRSK-----------LSGVCWNNYIRN-YLASSDYDGIVKVFEPLKFYVDCLSLD 766
Query: 139 --------------EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD------------- 171
EH +R WSVD+S+ P ASGSDD ++++W+
Sbjct: 767 YPFISFGQAISHFIEHE-KRAWSVDFSEACPTKLASGSDDCSVKLWNINEACSSILDFVV 825
Query: 172 ----PRCDGG-----------------KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA 210
P G C+ T++ A+ VCCV+F P S L+A G +
Sbjct: 826 LIATPTEISGIYTYEYINSTLDYSVNRNCLGTIRNIAN---VCCVQFSPQSSHLLAFGSS 882
Query: 211 DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR----- 265
D + Y YD+R + P + GH K V+Y +FLD +TLVTA TD LKLW++ +
Sbjct: 883 DFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTHGGLS 942
Query: 266 ---VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPV 319
T+ GH N +NFVGLS G + CGSETN+V+ Y P+ + F +P+
Sbjct: 943 TNACSLTFGGHTNEKNFVGLST--SDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPI 1000
Query: 320 TAAGSERG---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ E FVSSVCWR+ +V+ S+G + V
Sbjct: 1001 SGKEIEEDNNLFVSSVCWRKRSN---MVVSASSNGSIKVL 1037
>gi|222619188|gb|EEE55320.1| hypothetical protein OsJ_03317 [Oryza sativa Japonica Group]
Length = 797
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 166/342 (48%), Gaps = 66/342 (19%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----PVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+++ ++ +H PVV + + SK
Sbjct: 492 SNLVCSVGFDRDKEFFATAGVNKKIKVFEYNMIVNEHCDIHYPVVEMSNRSK-------- 543
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W + S D++G+V +D+ + E EH RRVWSVD+S DP
Sbjct: 544 ---LSCICWNSYMKSHI-ASSDFEGIVQVWDVTRSQVFVEMREHE-RRVWSVDFSLADPT 598
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
K +V +R+ VC V+F P + +A G AD K Y
Sbjct: 599 ---------------------KLAGSVGTIRTRANVCSVQFQPDSARSIAIGSADHKIYC 637
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRV------IRTY 270
YD+R + P GH KTV+Y++++D T+V+A TD LKLW+++ S+ +RT+
Sbjct: 638 YDLRNIRAPYCTLVGHTKTVSYVKYVDASTIVSASTDNSLKLWDLSMSQARIIDSPLRTF 697
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQ-----------VFVYDVRWGEPVWVHDF--- 316
GH N +NFVGLS+ G + GSETN+ VFVY + PV + F
Sbjct: 698 TGHTNTKNFVGLSI--SDGYIATGSETNEEYFGSLTLVRKVFVYHKAFPMPVLAYKFSVT 755
Query: 317 EPVTAAGSE--RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+P++ + F+S VCWR G+ TL++ S G + +
Sbjct: 756 DPISGQEIDDPSQFISCVCWR--GQSS-TLLSANSSGNIKIL 794
>gi|424513549|emb|CCO66171.1| predicted protein [Bathycoccus prasinos]
Length = 849
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 173/382 (45%), Gaps = 70/382 (18%)
Query: 35 SSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYI 94
+SP VSD + I+ ++FAT G++++I Y + + ++ I
Sbjct: 472 TSPIPPVSDIVSSIDVSMDQTMFATAGVSKRIEFYTFTDICDRTAANQNEERPRITRAQI 531
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK-- 152
+K+S L + + S DY+GVV +D E I + +EH +R W+V+Y +
Sbjct: 532 KVKSKISCLSFSRKHVSHIAAS-DYEGVVTIWDAETSQSILKFEEHD-KRCWTVEYCRCV 589
Query: 153 GDPVLGASGSDDGTMQMWDPRC----DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
+ L ASGSDDG +++W G + V +Q R+ VCC+ + P + +A G
Sbjct: 590 DNMHLIASGSDDGAVKIWSESGISMGGGNRSVMEIQ---MRANVCCIAWSPTTAHDIAIG 646
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWN-------- 260
CAD K YD+R+ +P+ H+K V+Y++++ L +A TD + +W+
Sbjct: 647 CADHKVRVYDLRRPHEPLYTLSSHKKAVSYVKYISSSELCSASTDSSVCIWDVKKTHDHN 706
Query: 261 ---------------------------------------VNDSRVIRTYKGHVNNRNFVG 281
V+ +R+IRT GHVN +NFVG
Sbjct: 707 ATFDPYNIYHNQQQFQGDDNGVPLPKMETNNGADGESDLVSSTRLIRTLTGHVNRKNFVG 766
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE--------PVTAAGSERGFVSSVC 333
L+ G + CGSETN++FVY+ + PV F+ S FVS+VC
Sbjct: 767 LAASSDGKSVACGSETNELFVYNKNFSAPVATVSFDTPGNDMKSSSRDHNSGNHFVSAVC 826
Query: 334 WRRVGEDECTLVAGGSDGLLHV 355
W DE TL++ S G + +
Sbjct: 827 W----SDESTLISANSKGRIKI 844
>gi|218188984|gb|EEC71411.1| hypothetical protein OsI_03584 [Oryza sativa Indica Group]
Length = 793
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 167/344 (48%), Gaps = 70/344 (20%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----PVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+++ ++ +H PVV + + SK
Sbjct: 488 SNLVCSVGFDRDKEFFATAGVNKKIKVFEYNMIVNEHRDIHYPVVEMSNRSK-------- 539
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W + S D++G+V +D+ + E EH RRVWSVD+S DP
Sbjct: 540 ---LSCICWNSYMKSHI-ASSDFEGIVQVWDVTRSQVFVEMREHE-RRVWSVDFSLADPT 594
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
K +V +R+ VC V+F P + +A G AD K Y
Sbjct: 595 ---------------------KLAGSVGTIRTRANVCSVQFQPDSARSIAIGSADHKIYC 633
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRV------IRTY 270
YD+R + P GH KTV+Y++++D T+V+A TD LKLW+++ S+ ++T+
Sbjct: 634 YDLRNIRAPYCTLVGHTKTVSYVKYVDASTIVSASTDNSLKLWDLSMSQARIIDSPLQTF 693
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQ-----------VFVYDVRWGEPVWVHDF--- 316
GH N +NFVGLS+ G + GSETN+ VFVY + PV + F
Sbjct: 694 TGHTNTKNFVGLSI--SDGYIATGSETNEEYFGSLTLVRKVFVYHKAFPMPVLAYKFSVT 751
Query: 317 EPVTAAGSE----RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+P++ G E F+S VCWR G+ TL++ S G + +
Sbjct: 752 DPIS--GQEIDDPSQFISCVCWR--GQSS-TLLSANSSGNIKIL 790
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 167/351 (47%), Gaps = 60/351 (17%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
FD D FAT G++R+++I++ + L +V+ + + I T +KLSS+ W
Sbjct: 661 FDRDDEFFATVGVSRRVKIFDFAACLEGQD--SVMHYPAL---QITTRSKLSSVSWNSYV 715
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+++ S DY G++ +D + DEH RRVWSVD+S DP+ SGSDDG++++
Sbjct: 716 KSQLITS-DYGGLIQLWDAATAGEAAQYDEHA-RRVWSVDFSTTDPMRFLSGSDDGSVRL 773
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W ++V A+ + VC V+F P S +A GCA+ + Y YD+R+ P+ V
Sbjct: 774 WSVHEQ-----ASVARIAAPANVCSVQFSPADSHTIAFGCANYRVYLYDLRRTAHPLAVV 828
Query: 230 DGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND----------------------SRVI 267
G ++ V+Y++FL LV+A TD L+LW++ D R
Sbjct: 829 CGPQRAVSYVKFLGGSHLVSASTDSTLRLWDLADVMAGADSATTSGASSAGSSGTRCRPA 888
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQ----------------------VFVYDV 305
TY GH N RNFVGLSV G +L CGSE N V+ Y
Sbjct: 889 CTYTGHRNQRNFVGLSVSPDGHIL-CGSEDNSGAWRSGAAVHAGSRRRAAHAQAVYSYYR 947
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ F P A + FVS+VCW C +A S GLL +
Sbjct: 948 SLPFSTAQYRFSPGEPAEGHQPFVSAVCWANRSR-HC--LAANSQGLLQIL 995
>gi|147765872|emb|CAN77887.1| hypothetical protein VITISV_020525 [Vitis vinifera]
Length = 151
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 102/150 (68%), Gaps = 25/150 (16%)
Query: 1 MSNFHDH---QQPQAETTN------------ERARCEWDFNLRTTVSSSSSPNAAVSDSI 45
M NF Q P+ E N ERARC+W+FNL T V+SSS A +D+I
Sbjct: 1 MKNFSTQFNPQSPEVENPNIQEEKAEQHIEEERARCDWEFNLXTVVTSSSX--GASTDTI 58
Query: 46 GVIEFDPSDSVFATGGIARKIRIYNIKSVLV-------DHPVVAVVDHSKVCDYYICTPA 98
GVIEFDPSDS+ ATGGIAR IR+Y++KS+L +H V ++ H+ CDYYI TPA
Sbjct: 59 GVIEFDPSDSLVATGGIARXIRVYSVKSLLPGENHSHGEHNV-KLLQHNNACDYYIWTPA 117
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDL 128
KLSSL+WKPG+SGRVLGSGDYDGVV EYDL
Sbjct: 118 KLSSLRWKPGSSGRVLGSGDYDGVVTEYDL 147
>gi|302833858|ref|XP_002948492.1| hypothetical protein VOLCADRAFT_44236 [Volvox carteri f.
nagariensis]
gi|300266179|gb|EFJ50367.1| hypothetical protein VOLCADRAFT_44236 [Volvox carteri f.
nagariensis]
Length = 197
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
VL GDYDGV+++ + + + + H GR++WSV +S P L AS +DD ++W
Sbjct: 1 VLTVGDYDGVLLQLHIASGHQLADVEAHDGRKIWSVAHSCRTPHLVASAADDRCARLWAG 60
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM-VDPVLVFDG 231
R +C+++VQP+ R+AVC V+F P L+A C+D+ AY YD+R + P+
Sbjct: 61 R-GLSQCIASVQPN-PRAAVCSVDFSPARDHLLALACSDRTAYVYDMRSLDRGPLATLRH 118
Query: 232 HRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
H + +Y RFL D LVTA TD L LW+++++ V ++GH N +NFVGLSV GLL
Sbjct: 119 HARPASYCRFLGGDRLVTAATDSSLALWDLSEA-VPAVFQGHRNEKNFVGLSVRAADGLL 177
Query: 292 GCGSETNQVFVYDVRWGEPV 311
CGSE ++ F Y W P+
Sbjct: 178 ACGSECSRAFAYHSSWSTPL 197
>gi|62321324|dbj|BAD94577.1| putative photomorphogenesis repressor protein [Arabidopsis
thaliana]
Length = 241
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/236 (38%), Positives = 129/236 (54%), Gaps = 24/236 (10%)
Query: 135 FERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCC 194
F + +R WSVD+S DP SGSDD ++++W + + + T+ A+ VCC
Sbjct: 13 FSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS--INEKRSLGTIWSPAN---VCC 67
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDG 254
V+F + + L+A G AD K Y YD+R + P GH K V+Y++F+D +T+V+A TD
Sbjct: 68 VQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETIVSASTDN 127
Query: 255 CLKLWNVNDSR--------VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
LKLWN+N + TYKGH N +NFVGLSV G + CGSETN+V+ Y
Sbjct: 128 SLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSV--LDGYIACGSETNEVYSYYKS 185
Query: 307 WGEPVWVHDFEPV-TAAGSER-----GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
P+ + F V +G+E FVSSVCWR+ LVA S G + +
Sbjct: 186 LPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSN---MLVAANSTGNMKLL 238
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 164/356 (46%), Gaps = 74/356 (20%)
Query: 57 FATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
AT GI++++RI+ + ++ V H V + AKLSS+ W P + +
Sbjct: 1071 IATAGISKRLRIFEVDPLINSGAAV----HCPVAEMKAS--AKLSSMTWNPYIK-HTVAT 1123
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDG 176
DY+GVV +D+ + EH +RVWS +SK DP SGSDDGT ++W +
Sbjct: 1124 ADYEGVVSLWDVNRGEVGSAFHEHK-KRVWSTSWSKLDPTRLVSGSDDGTCRVWS--INQ 1180
Query: 177 GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV 236
+ + +Q +R+ +CCV F P +++VA G AD AYD+R + P++ GH+K V
Sbjct: 1181 RESTAVIQ---NRANICCVHFSPVSANVVAFGSADYSIKAYDLRHTLRPLVSLTGHKKAV 1237
Query: 237 TYIRFLDVDTLVTAGTDGCLKLWNVN-------------------------------DSR 265
+Y+R+LD D + +A TD LKLW+V +
Sbjct: 1238 SYVRWLDGDLIASASTDNTLKLWDVKRGILGAMAGPTQLAVSDPSSTLWAGDKSGDGNPA 1297
Query: 266 VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
+RT++GHVN +NFVG+S G + GSE N V VY P+ H VTAA S
Sbjct: 1298 CLRTFRGHVNRKNFVGMSA-SSAGHIAVGSEDNTVCVYAKAVPAPIARHSLA-VTAAFSN 1355
Query: 326 RG-------------------------FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
G FVSSV W G LVA S G + +
Sbjct: 1356 HGAGAGGAQSTTATAGGGGGDGDKPGLFVSSVTWSPSGR---MLVAANSCGAVKIM 1408
>gi|312079151|ref|XP_003142050.1| hypothetical protein LOAG_06466 [Loa loa]
Length = 631
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 160/326 (49%), Gaps = 66/326 (20%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICTPAK 99
+ IEFD F G+A++I++Y +SV+ + +PV + CT +K
Sbjct: 355 VSSIEFDKDGEFFILAGVAKRIKVYEFQSVIENTDTLHYPVTQLQ----------CT-SK 403
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+S++ W P L S DYDG V +D L + + ++ ++WS+
Sbjct: 404 ISNVSWNPYCKS-TLASSDYDGTVQLWDTSLARSIRRYQV------KLWSI--------- 447
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
G D + V+T+ + VCCV F P + + G AD + Y
Sbjct: 448 ---GVD--------------RSVATIDAKVN---VCCVCFSPTQRNYLVFGSADHCIHLY 487
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
D+R+ ++PV VF GHRK V+Y+++ + +V+A TD L+LW+V+ + IRT KGH N R
Sbjct: 488 DIRRPLEPVNVFRGHRKAVSYVKYCSENEVVSASTDSNLRLWDVSSGKCIRTMKGHQNER 547
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-------EPVTAAGSERGFVS 330
NFVGL+ G + CGSE N +++Y +P+ +DF + A S FVS
Sbjct: 548 NFVGLAT--DGNHIVCGSENNHLYLYHKGLCDPLMCYDFGRADNTRSALLATDSSSDFVS 605
Query: 331 SVCWRRVGEDECTLVAGGSDGLLHVF 356
+V W+R + +VA S G HVF
Sbjct: 606 AVSWKR---NSNIVVAANSQGTTHVF 628
>gi|393911987|gb|EJD76535.1| E3 ubiquitin-protein ligase RFWD2 [Loa loa]
Length = 406
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 160/326 (49%), Gaps = 66/326 (20%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICTPAK 99
+ IEFD F G+A++I++Y +SV+ + +PV + CT +K
Sbjct: 130 VSSIEFDKDGEFFILAGVAKRIKVYEFQSVIENTDTLHYPVTQLQ----------CT-SK 178
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+S++ W P L S DYDG V +D L + + ++ ++WS+
Sbjct: 179 ISNVSWNPYCKS-TLASSDYDGTVQLWDTSLARSIRRYQV------KLWSI--------- 222
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
G D + V+T+ + VCCV F P + + G AD + Y
Sbjct: 223 ---GVD--------------RSVATIDAKVN---VCCVCFSPTQRNYLVFGSADHCIHLY 262
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
D+R+ ++PV VF GHRK V+Y+++ + +V+A TD L+LW+V+ + IRT KGH N R
Sbjct: 263 DIRRPLEPVNVFRGHRKAVSYVKYCSENEVVSASTDSNLRLWDVSSGKCIRTMKGHQNER 322
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF-------EPVTAAGSERGFVS 330
NFVGL+ G + CGSE N +++Y +P+ +DF + A S FVS
Sbjct: 323 NFVGLAT--DGNHIVCGSENNHLYLYHKGLCDPLMCYDFGRADNTRSALLATDSSSDFVS 380
Query: 331 SVCWRRVGEDECTLVAGGSDGLLHVF 356
+V W+R + +VA S G HVF
Sbjct: 381 AVSWKR---NSNIVVAANSQGTTHVF 403
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 159/326 (48%), Gaps = 43/326 (13%)
Query: 56 VFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK--WKPGTSGRV 113
+FAT GI++++ IY + SV+ V H + + S KP V
Sbjct: 889 LFATAGISKRLCIYEVASVMQLGNAV----HCPAIELSTSSKLSSISFNPYVKP-----V 939
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
+ S YDG + +D++K + H +RVWS ++S DP S SDDGT ++W
Sbjct: 940 MASATYDGAMQIWDVQKGMETMRLKNHT-KRVWSTEFSPIDPTRLLSASDDGTTRVWSI- 997
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
+C+ P+ ++ +C V S+L+A G AD K + YD+R V P+L + H+
Sbjct: 998 TQRRECMVINDPN--QANICSVNSSRMDSNLIAVGSADHKVHVYDLRNAVMPMLTLETHK 1055
Query: 234 KTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--VIRTYKGHVNNRNFVGLSVWRHGGLL 291
K V+Y+R++ + LV+A TD L+LW+V SR +RTY GHVN +NFVGLSV G +
Sbjct: 1056 KAVSYVRWMG-NELVSASTDSLLRLWDVKGSRGVCLRTYTGHVNEKNFVGLSVT-SDGRI 1113
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSER---------------------GFVS 330
CGSE N V +Y PV H F +T R FV+
Sbjct: 1114 ACGSEDNTVRMYAKFAPLPVAGHSFMRMTPGCGLREGGPTAGLCGGIKPVLTNDKGAFVT 1173
Query: 331 SVCWRRVGEDECTLVAGGSDGLLHVF 356
SV W G+ L+A S G L +F
Sbjct: 1174 SVAWSPDGQ---RLLASNSRGNLKIF 1196
>gi|147772009|emb|CAN60249.1| hypothetical protein VITISV_039399 [Vitis vinifera]
Length = 231
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 128/251 (50%), Gaps = 41/251 (16%)
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD----GTMQMWDPRCDGGKC 179
M +D + EH +R WSVD+S DP ASGSDD T +W+P
Sbjct: 1 MMWDASTGEGFSQYTEHQ-KRAWSVDFSPVDPTKFASGSDDCSRNSTSTIWNP------- 52
Query: 180 VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI 239
+ VCCV+F + + L+ G AD K Y YD+R P V GH+K V+Y+
Sbjct: 53 ----------ANVCCVQFSAYSTHLLVFGSADYKIYGYDLRHTRIPWCVLAGHQKAVSYV 102
Query: 240 RFLDVDTLVTAGTDGCLKLWNVNDSRV--------IRTYKGHVNNRNFVGLSVWRHGGLL 291
+FLD +TLV+A TD LKLW++N + + T+ GH N +NFVGLSV G +
Sbjct: 103 KFLDSETLVSASTDNTLKLWDLNKTNLDGLSSNACTLTFTGHTNEKNFVGLSVL--DGYI 160
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDF---EPVTA---AGSERGFVSSVCWRRVGEDECTLV 345
CGSETN+V+ Y PV H F +P+T FVSSVCWR ++ +V
Sbjct: 161 ACGSETNEVYTYHRSLPMPVTSHKFGSIDPITEHEIVDDNGQFVSSVCWR---QNSNMVV 217
Query: 346 AGGSDGLLHVF 356
A S G + +
Sbjct: 218 AANSSGRIKLL 228
>gi|357519507|ref|XP_003630042.1| SPA1-like protein [Medicago truncatula]
gi|355524064|gb|AET04518.1| SPA1-like protein [Medicago truncatula]
Length = 814
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 149/271 (54%), Gaps = 37/271 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHPVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+I+ +++ + +PVV + SK
Sbjct: 568 SNLVCSLSFDRDGEFFATAGVNKKIKIFECDTIIKGDRDIHYPVVEMACRSK-------- 619
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSSL W ++ S +++GVV +D+ + + E EH RRVWS+D+S DP
Sbjct: 620 ---LSSLCWNTYIKSQI-ASSNFEGVVQLWDVTRSQILSEMREHE-RRVWSIDFSSADPT 674
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASGSDDG++++W + G + T++ A+ VCCV+F + +A G AD + Y
Sbjct: 675 MLASGSDDGSVKLWS--INQGVSIGTIKTKAN---VCCVQFPLDSARYLAFGSADHRIYY 729
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
YD+R + P+ GH KTV+YI+F+D LV+ + DS I+++ GH N
Sbjct: 730 YDLRNLRVPLCTLVGHNKTVSYIKFVDNVNLVS-----------IVDS-PIQSFTGHTNV 777
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
+NFVGLSV G + GSETN+V+ +R+
Sbjct: 778 KNFVGLSV--SDGYIATGSETNEVYFNVLRY 806
>gi|384487260|gb|EIE79440.1| hypothetical protein RO3G_04145 [Rhizopus delemar RA 99-880]
Length = 623
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 154/328 (46%), Gaps = 54/328 (16%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIK----------SVLVDHPVVAVVDHSKVCDYYI 94
+ IEFD D +FA GGI + I+IY+ + + + PV + CD
Sbjct: 308 VSSIEFDKDDELFAVGGILKDIKIYDFRLTCRGPNEARTATIHCPVRRIK-----CD--- 359
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
K+S L W +V S DY GV+ +D+ EH +R WSVD S +
Sbjct: 360 ---NKISCLSWSSYIKSQV-ASADYQGVINVWDVTTGQKTSSFVEHK-KRAWSVDTSARN 414
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
P L ASGSDD ++++W + + T Q + +CC +F P S+ +A G AD +
Sbjct: 415 PNLIASGSDDTSVKVWS--LTSQRSLFTFQ---HKGNICCAKFAPNNSNYLAVGSADHQI 469
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
YD+R P+ + GH+K V+Y+++++ D L++A T C RTY GH+
Sbjct: 470 ICYDLRNPSIPLHTYQGHQKAVSYVKWMNDDELISAETREC-----------TRTYTGHL 518
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPV----TAAGSERGF 328
N +NFVGLSV + + CGSETN V+ Y P+ + F +P+ F
Sbjct: 519 NEKNFVGLSV--NNDWIACGSETNTVYTYHKYSKTPIAKYKFPIDPIPGKMITENDPTYF 576
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLLHVF 356
VSS+ C L+ + +F
Sbjct: 577 VSSLVL-------CRLITPSTPSFFLLF 597
>gi|224032003|gb|ACN35077.1| unknown [Zea mays]
Length = 195
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 9/173 (5%)
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
++ +C V+++P S VA G AD + +D+R PV VF GH+K V+Y++FL + L
Sbjct: 25 KANICSVKYNPGSSFYVAVGSADHHIHYFDLRNPSAPVHVFGGHKKAVSYVKFLSNNELA 84
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+A TD L+LW+V D+ +RT++GH N +NFVGLSV + + CGSETN+VFVY
Sbjct: 85 SASTDSTLRLWDVKDNLPVRTFRGHKNEKNFVGLSV--NNEYIACGSETNEVFVYHKAIS 142
Query: 309 EPVWVHDF--EPVTAAGSERG--FVSSVCWRRVGEDECTLVAGGSDGLLHVFV 357
+P H F + A + G F+S+VCW+ D T++A S G + V V
Sbjct: 143 KPAASHRFVSSNLDDADDDPGSYFISAVCWK---SDSPTMLAANSQGTIKVHV 192
>gi|357481459|ref|XP_003611015.1| Histone acetyltransferase type B subunit [Medicago truncatula]
gi|355512350|gb|AES93973.1| Histone acetyltransferase type B subunit [Medicago truncatula]
Length = 1323
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 100/179 (55%), Gaps = 19/179 (10%)
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
VCCV+F S L+A G A+ Y YD+R + P V GHRK V+Y++FLD +TLV+A
Sbjct: 974 VCCVQFSAHSSHLLAFGSANYSTYCYDLRNLRSPWCVLAGHRKAVSYVKFLDSETLVSAS 1033
Query: 252 TDGCLKLWNVNDSRVI--------RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
TD LK+W++N + + T GH N +NFVGLSV G + CGSE+N+V+ Y
Sbjct: 1034 TDNSLKIWDLNKTSSVGTSTSARSLTLSGHTNEKNFVGLSV--ADGYIACGSESNEVYTY 1091
Query: 304 DVRWGEPVWVHDF---EPVTAAGSER---GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
P+ H F +P++ ++ FVSSVCWR TL+A S G + V
Sbjct: 1092 YKSLPMPITSHKFGSIDPISGKETDDDHGQFVSSVCWRGKSN---TLLAANSSGCIKVL 1147
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 18/131 (13%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIK-----SVLVDHPVVAVVDHSKVCDYYICTPAK 99
I + FD + FA+ GI++KI+I++ SV + +P V + + SK
Sbjct: 724 ICSLSFDRDEDYFASAGISKKIKIFDFNTLCNDSVDIHYPAVEMSNRSK----------- 772
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
LS + W L S DYDGVV +D + EH +R WSVD+S P A
Sbjct: 773 LSCVCWNSYIKN-YLASTDYDGVVKLWDASTGQEFSQYSEHE-KRAWSVDFSPVCPTKFA 830
Query: 160 SGSDDGTMQMW 170
SGSDD T+++W
Sbjct: 831 SGSDDCTVKLW 841
>gi|302143300|emb|CBI21861.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 110/180 (61%), Gaps = 16/180 (8%)
Query: 188 SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTL 247
+++ VCCV+F P + +A G AD K Y YD+R P+ +GH KTV+Y++F++ TL
Sbjct: 35 TKANVCCVQFPPDSARSLAIGSADHKVYCYDLRNTRIPLATLNGHSKTVSYVKFINSTTL 94
Query: 248 VTAGTDGCLKLWNVN--DSRV----IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVF 301
V+A TD LKLW+++ SRV ++T+ GH+N +NFVGLS+ G + GSETN+VF
Sbjct: 95 VSASTDSSLKLWDLSTCTSRVLDSPLQTFTGHMNVKNFVGLSI--SDGYIATGSETNEVF 152
Query: 302 VYDVRWGEPVWVHDF---EPVTAAGSERG--FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+Y + PV F +P++ + G FVS+VCWR G+ TL+A S G + +
Sbjct: 153 IYHKAFPMPVLSFKFSTMDPLSGQNVDDGQQFVSTVCWR--GQST-TLLAANSAGHIKLL 209
>gi|440799182|gb|ELR20243.1| K+ channel tetramerisation subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 570
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 156/336 (46%), Gaps = 57/336 (16%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH----------PV------VAVV 84
V+ I I+FDP+ FA ++ +I IY+ S + P+ V +
Sbjct: 268 VTRVITCIDFDPTGDYFAASQLSERISIYSYTSFVNARESVPLAAQTLPIKSNMRWVVMP 327
Query: 85 DHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR 144
D+S + ++ L++L W +L GD+DG +
Sbjct: 328 DNSNLDHTWLVADCLLTTLSWNKSVR-HLLAHGDHDGNIC-------------------- 366
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
+W+ + ++ AS SDD T+++W D +++ AS++ VCCV + P S L
Sbjct: 367 LWNTEIAQF-----ASASDDRTVRLWT--IDDKTSTASI---ASKATVCCVRYSPNDSML 416
Query: 205 VAAGC----ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWN 260
+ AD + YD+R + P + HRK V + FL+ + LV+A DG +K W+
Sbjct: 417 AFSSAGFDNADHHVHCYDLRNLKIPFAILRDHRKAVWALSFLNQEQLVSASVDGTIKRWH 476
Query: 261 VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT 320
++ + +Y GH N +NF GL+V R G + CGSE NQV++++V P+ + V
Sbjct: 477 MHKGTPLMSYSGHANAKNFTGLTVDRTGEHIICGSEDNQVYLWNVDTPTPLTTYSCGEV- 535
Query: 321 AAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
GS +VS+V R +V G S G +HVF
Sbjct: 536 --GSSPKWVSTVATR---PGSNVIVGGNSAGDVHVF 566
>gi|302831614|ref|XP_002947372.1| hypothetical protein VOLCADRAFT_45534 [Volvox carteri f.
nagariensis]
gi|300267236|gb|EFJ51420.1| hypothetical protein VOLCADRAFT_45534 [Volvox carteri f.
nagariensis]
Length = 229
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 114/229 (49%), Gaps = 28/229 (12%)
Query: 143 RRVWSVDY--SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
RRVW VD+ ASGSDDG +++W + C++ R VCCVEFHP
Sbjct: 6 RRVWGVDFCPHPSRHHYFASGSDDGLVKLWSTQ-QASSCLAL----ELRGNVCCVEFHPH 60
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
L+A G A A YD+R+ P+ GHR+ V+Y+R+L + LVTA TD LKLW
Sbjct: 61 HPHLLAVGSALHCAAVYDLRQPAAPLHTLLGHRRAVSYVRWLSNRHELVTASTDNTLKLW 120
Query: 260 --------NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ ++RT+ GHVN RNFVGL+ G + CGSE ++VFVY +P
Sbjct: 121 SLSPPPPPAPSAQPLVRTFCGHVNERNFVGLAT--DGDYVACGSERHEVFVYHRSLPQPA 178
Query: 312 WVHDFEPVTAAGSE-------RGFVSSVCWRRVGEDECTLVAGGSDGLL 353
F G FV+++ WRR + L+A S G L
Sbjct: 179 LRFSFAGSPHQGPNYQQQQQPNHFVTALQWRR---NSPHLLAANSAGCL 224
>gi|431915989|gb|ELK16243.1| E3 ubiquitin-protein ligase RFWD2, partial [Pteropus alecto]
Length = 555
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 277 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 330
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 331 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 386
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 387 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 441
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
R P++VF GHRK V+Y +F V+ + L L+ S+ + T+K
Sbjct: 442 RNTKQPIMVFKGHRKAVSYAKF------VSGSENNSLYLYYKGLSKTLLTFK 487
>gi|349604922|gb|AEQ00335.1| E3 ubiquitin-protein ligase RFWD2-like protein, partial [Equus
caballus]
Length = 320
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%), Gaps = 17/208 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S +
Sbjct: 128 VSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKISCIS 181
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 182 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 237
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD +++W D V++++ A+ VCCV+F P +A GCAD + YD+R
Sbjct: 238 DDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDLRNT 292
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTA 250
P++VF GHRK V+Y +F+ + +V+A
Sbjct: 293 KQPIMVFKGHRKAVSYAKFVSGEEIVSA 320
>gi|402896757|ref|XP_003911453.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Papio anubis]
Length = 242
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 15/207 (7%)
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
G S++ +++W D S+V + +++ VCCV+F P +A GCAD + Y
Sbjct: 22 GDDMSENKKVKLWYTNLD-----SSVASTEAKANVCCVKFSPSFRYHLAFGCADHCVHYY 76
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
D+ P++VF GH+K V+Y +F+ + +V A TD LKLWNV S ++KGH+N +
Sbjct: 77 DLPNTEQPIMVFKGHQKAVSYAKFVSGEEMVFASTDSQLKLWNVGKSYSPCSFKGHINEK 136
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVS 330
NFV L+ +G CGSE + +++Y + + F+ V + + + FVS
Sbjct: 137 NFVDLA--SNGDYKACGSENSSLYLYYKGLSKTLLTFKFDAVKSVLDKDRKGDDTKEFVS 194
Query: 331 SVCWRRVGE-DECTLVAGGSDGLLHVF 356
+VCWR + D L+A S G + V
Sbjct: 195 TVCWRALPNGDSNVLIAANSQGTIKVL 221
>gi|125580557|gb|EAZ21488.1| hypothetical protein OsJ_05108 [Oryza sativa Japonica Group]
Length = 277
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 121/268 (45%), Gaps = 65/268 (24%)
Query: 10 PQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIY 69
P E RCEW+F L TV S + A SDSIG ++FDP+ ATGGIARKIRIY
Sbjct: 40 PDDEDKLSPPRCEWEFRLAATVPSPA--LAGASDSIGSLDFDPTGRHLATGGIARKIRIY 97
Query: 70 NIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRV----LGSGDYDGVVME 125
VA C IC PAKLSS++ +PG V +G GDYDGVV E
Sbjct: 98 R----------VAEPSSPAAC---ICVPAKLSSVRSRPGGGEAVAASHVGCGDYDGVVTE 144
Query: 126 YDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT----MQMWDPRCDGGKCVS 181
YD+E+ VP++ERDEH GRR + + V SG G M +W
Sbjct: 145 YDVERGVPVWERDEHEGRRTAARE------VRSYSGHVSGRSFVGMGVWR---------- 188
Query: 182 TVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR----KMVDPVLVFDGHRKTVT 237
G+ L+A+G + YD+R V P D V
Sbjct: 189 -------------------GAGLIASGSESGHVFVYDLRWSKPIWVHPFSHADAFVSAVA 229
Query: 238 YIRFLDVDT---LVTAGTDGCLKLWNVN 262
+ + D+ LV G+DG LKL+ +
Sbjct: 230 WRQLAGDDSDGQLVAGGSDGVLKLFTTH 257
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 35/218 (16%)
Query: 172 PRCDGGKCVSTVQPSASRS----AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
PRC+ ++ PS + + ++ ++F P G L G A +K Y V + P
Sbjct: 49 PRCEWEFRLAATVPSPALAGASDSIGSLDFDPTGRHLATGGIA-RKIRIYRVAEPSSPAA 107
Query: 228 VF--------------DGHRKTVTYIRFLDVDTLVTA-GTDGCLKLWNVND-------SR 265
G +++ D D +VT + + +W ++ +R
Sbjct: 108 CICVPAKLSSVRSRPGGGEAVAASHVGCGDYDGVVTEYDVERGVPVWERDEHEGRRTAAR 167
Query: 266 VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
+R+Y GHV+ R+FVG+ VWR GL+ GSE+ VFVYD+RW +P+WVH F A
Sbjct: 168 EVRSYSGHVSGRSFVGMGVWRGAGLIASGSESGHVFVYDLRWSKPIWVHPFSHADA---- 223
Query: 326 RGFVSSVCWRRVGEDEC--TLVAGGSDGLLHVFVGKKK 361
FVS+V WR++ D+ LVAGGSDG+L +F ++
Sbjct: 224 --FVSAVAWRQLAGDDSDGQLVAGGSDGVLKLFTTHRR 259
>gi|413939108|gb|AFW73659.1| hypothetical protein ZEAMMB73_704258 [Zea mays]
Length = 491
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 143/317 (45%), Gaps = 82/317 (25%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ S +V+ P H V + + T +KLS L
Sbjct: 250 VSSIEFDRDDELFATAGVSKRIKVFEF-STVVNEPSDV---HCPVVE--MATRSKLSCLS 303
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S ++ S DY+G+V +D++ + + E +EH +R WSVD+S+ D + SGSDD
Sbjct: 304 WN-KYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEHE-KRAWSVDFSRTDSSMLVSGSDD 361
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +C V+++P GSS A
Sbjct: 362 CKVKVW---CTNQE--ASVINIDMKANICSVKYNP-GSSFYVA----------------- 398
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
V F GH+ N +NFVGLSV
Sbjct: 399 -VRTFRGHK-----------------------------------------NEKNFVGLSV 416
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ + CGSETN+VFVY +P H F ++ F+S+VCW+ D
Sbjct: 417 --NNEYIACGSETNEVFVYHKAISKPAASHRFVSSDLDDADDDPGSYFISAVCWK---SD 471
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 472 SPTMLTANSQGTIKVLV 488
>gi|219363231|ref|NP_001136719.1| uncharacterized protein LOC100216856 [Zea mays]
gi|194696752|gb|ACF82460.1| unknown [Zea mays]
Length = 174
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 88/143 (61%), Gaps = 10/143 (6%)
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
RRVWSVD+S DP SGSDDG++++ D G + T++ +R+ VC V+F P +
Sbjct: 6 RRVWSVDFSIMDPTKLVSGSDDGSVKLRDMNQAAGS-IGTIK---TRANVCFVQFQPDTA 61
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN 262
+A G AD K Y YD+R + P GH KTV+Y+++LD T+V+A TD LKLW+++
Sbjct: 62 RSIAIGSADHKIYCYDLRHIRAPYCTLVGHTKTVSYVKYLDASTIVSASTDNSLKLWDLS 121
Query: 263 DS--RVI----RTYKGHVNNRNF 279
S R+I +T+KGH N +
Sbjct: 122 MSTGRIIDSPVQTFKGHTNTKEL 144
>gi|260828987|ref|XP_002609444.1| hypothetical protein BRAFLDRAFT_93483 [Branchiostoma floridae]
gi|229294800|gb|EEN65454.1| hypothetical protein BRAFLDRAFT_93483 [Branchiostoma floridae]
Length = 584
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 27/252 (10%)
Query: 11 QAETTNERARCEWDFNL-RTTVSSSSSPNAAVSDS---------IGVIEFDPSDSVFATG 60
Q ET + + CE+ +L + T S P A +S + + IEFD + FA
Sbjct: 246 QTETHSTDSLCEFTDSLTKFTKYSGFRPLATLSYASDIYNGSSIVSSIEFDRDNEYFAIA 305
Query: 61 GIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYD 120
G+ +KI+++ +V+ D VD C C +K+S + W G +L S DY+
Sbjct: 306 GVTKKIKVFEYGTVIRD-----AVDIHYPCSEMACN-SKISCVCWSSYHKG-MLASSDYE 358
Query: 121 GVVMEYDL--EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGK 178
G V +D K +F+ E +R WSVD++ DP L ASGSDD +++W +
Sbjct: 359 GTVTLWDAFNATKSRMFQEHE---KRCWSVDFNHVDPKLLASGSDDAKVKLWATNMEH-- 413
Query: 179 CVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTY 238
+V +++ VCCV+F+P +A G AD + YD+R + V GHRK V+Y
Sbjct: 414 ---SVACLEAKANVCCVKFNPNSRFHIAFGSADHCVHYYDLRNTRQALNVLKGHRKAVSY 470
Query: 239 IRFLDVDTLVTA 250
+F++ +V+A
Sbjct: 471 AKFVNSQEIVSA 482
>gi|340385525|ref|XP_003391260.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like, partial
[Amphimedon queenslandica]
Length = 147
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 86/145 (59%), Gaps = 14/145 (9%)
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
D+ K+ +P+ + GH+K V+Y++FL+ LV+A TD LKLW+++ +RT+KGHVN++
Sbjct: 7 DILKLNEPLTLLHGHKKAVSYVQFLNEKELVSASTDSELKLWSIDTGSCLRTFKGHVNDK 66
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE-------PVTAAGSERG--F 328
NFVGLSV + G + CGSE N +VY +P+ F+ V S++G F
Sbjct: 67 NFVGLSV--NNGYITCGSENNSFYVYQKYVSKPILSFKFQLSRNILPSVNEHRSDKGPEF 124
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLL 353
VS+VC R D +VA S G +
Sbjct: 125 VSAVCSR---NDSSGIVAANSQGFI 146
>gi|400130565|gb|AFP67495.1| constitutively photomorphogenic protein, partial [Pugionium
dolabratum]
gi|400130567|gb|AFP67496.1| constitutively photomorphogenic protein, partial [Pugionium
dolabratum]
Length = 109
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 68/96 (70%)
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
++ +CCV+++P S+ VA G AD + YD+R + P+ VF GH+K V+Y++FL + L
Sbjct: 13 KANICCVKYNPGSSNYVAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELA 72
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+A TD L+LW+V D+ +RT++GH N +NFVGL+V
Sbjct: 73 SASTDSTLRLWDVKDNLPVRTFRGHANEKNFVGLTV 108
>gi|9454536|gb|AAF87859.1|AC022520_3 Unknown protein [Arabidopsis thaliana]
Length = 763
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 116/264 (43%), Gaps = 75/264 (28%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICT 96
S+ + I FD FAT G+ +KI+I+ +S++ D +PVV + SK
Sbjct: 458 SNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSK-------- 509
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W +V S +++GVV +D+ + + E EH +RVWS+DYS DP
Sbjct: 510 ---LSGICWNSYIKSQV-ASSNFEGVVQVWDVARNQLVTEMKEHE-KRVWSIDYSSADPT 564
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGSDDG+ G + T++ A+ +CCV+F +A G AD K Y
Sbjct: 565 LLASGSDDGS----------GVSIGTIKTKAN---ICCVQFPSETGRSLAFGSADHKVYY 611
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
YD+R P+ GH KT
Sbjct: 612 YDLRNPKLPLCTMIGHHKT----------------------------------------- 630
Query: 277 RNFVGLSVWRHGGLLGCGSETNQV 300
NFVGLSV G + GSETN+V
Sbjct: 631 -NFVGLSV--SDGYIATGSETNEV 651
>gi|400130559|gb|AFP67492.1| constitutively photomorphogenic protein, partial [Pugionium
cornutum]
gi|400130561|gb|AFP67493.1| constitutively photomorphogenic protein, partial [Pugionium
cornutum]
gi|400130563|gb|AFP67494.1| constitutively photomorphogenic protein, partial [Pugionium
cornutum]
gi|400130569|gb|AFP67497.1| constitutively photomorphogenic protein, partial [Pugionium
dolabratum]
Length = 109
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 68/96 (70%)
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
++ +CCV+++P S+ +A G AD + YD+R + P+ VF GH+K V+Y++FL + L
Sbjct: 13 KANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELA 72
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+A TD L+LW+V D+ +RT++GH N +NFVGL+V
Sbjct: 73 SASTDSTLRLWDVKDNLPVRTFRGHANEKNFVGLTV 108
>gi|119622024|gb|EAX01619.1| hCG1644144 [Homo sapiens]
Length = 236
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 9/162 (5%)
Query: 181 STVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIR 240
++V +++ VCCV+F +A GCAD + YD+R P++VF G +K V+Y +
Sbjct: 68 NSVASIEAKADVCCVKFSHSSRCHLAFGCADHCVHYYDLRSTKQPIMVFKGRQKAVSYAK 127
Query: 241 FLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
F + +V A TD L LWNV + ++KGH+N +NFVGL+ G + CGSE N +
Sbjct: 128 FASGEEIVFASTDSQLTLWNVGKLYCLHSFKGHINEKNFVGLA--SRGEYIACGSENNSL 185
Query: 301 FVYDVRWGEPVWVHDFEPVTAAGSERG-------FVSSVCWR 335
+ + + F+ V + + G FV + CWR
Sbjct: 186 NLCYKALSKTLLTFKFDTVKSVLDKEGKEDDTNEFVGAACWR 227
>gi|443722032|gb|ELU11082.1| hypothetical protein CAPTEDRAFT_134783, partial [Capitella teleta]
Length = 160
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 85/146 (58%), Gaps = 12/146 (8%)
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
YD+R + + VF GHRK V+Y +F++ +V+A TD LKLW+++ + +RT+ GH N
Sbjct: 6 YDLRNTKESLAVFKGHRKAVSYTKFVNSSEIVSASTDSQLKLWSLDRPQSLRTFMGHTNE 65
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV-TAAGSERG------FV 329
+NFVGL+ G + CGSE N +++Y + + + F+ V ER FV
Sbjct: 66 KNFVGLAT--DGDYVACGSENNSLYIYYKGLTKQILTYKFDTVKNVLEKERKDDDANEFV 123
Query: 330 SSVCWRRVGEDECTLVAGGSDGLLHV 355
S+VCWR+ G + +VA S G++ V
Sbjct: 124 SAVCWRQ-GSN--VVVAANSQGIIKV 146
>gi|219565355|dbj|BAH04206.1| COP1 [Cardamine nipponica]
gi|219565357|dbj|BAH04207.1| COP1 [Cardamine nipponica]
gi|219565359|dbj|BAH04208.1| COP1 [Cardamine nipponica]
gi|219565361|dbj|BAH04209.1| COP1 [Cardamine nipponica]
gi|219565421|dbj|BAH04239.1| COP1 [Cardamine alpina]
gi|219565423|dbj|BAH04240.1| COP1 [Cardamine alpina]
gi|364502056|dbj|BAL42012.1| COP1, partial [Cardamine nipponica]
gi|364502058|dbj|BAL42013.1| COP1, partial [Cardamine nipponica]
gi|364502060|dbj|BAL42014.1| COP1, partial [Cardamine nipponica]
gi|364502062|dbj|BAL42015.1| COP1, partial [Cardamine nipponica]
gi|364502064|dbj|BAL42016.1| COP1, partial [Cardamine nipponica]
gi|364502066|dbj|BAL42017.1| COP1, partial [Cardamine nipponica]
gi|364502068|dbj|BAL42018.1| COP1, partial [Cardamine nipponica]
gi|364502070|dbj|BAL42019.1| COP1, partial [Cardamine nipponica]
gi|364502072|dbj|BAL42020.1| COP1, partial [Cardamine nipponica]
gi|364502074|dbj|BAL42021.1| COP1, partial [Cardamine nipponica]
gi|364502076|dbj|BAL42022.1| COP1, partial [Cardamine nipponica]
gi|364502078|dbj|BAL42023.1| COP1, partial [Cardamine nipponica]
gi|364502080|dbj|BAL42024.1| COP1, partial [Cardamine nipponica]
gi|364502082|dbj|BAL42025.1| COP1, partial [Cardamine nipponica]
gi|364502084|dbj|BAL42026.1| COP1, partial [Cardamine nipponica]
gi|364502086|dbj|BAL42027.1| COP1, partial [Cardamine nipponica]
gi|364502088|dbj|BAL42028.1| COP1, partial [Cardamine nipponica]
gi|364502090|dbj|BAL42029.1| COP1, partial [Cardamine nipponica]
gi|364502092|dbj|BAL42030.1| COP1, partial [Cardamine bellidifolia]
gi|364502094|dbj|BAL42031.1| COP1, partial [Cardamine bellidifolia]
gi|364502096|dbj|BAL42032.1| COP1, partial [Cardamine bellidifolia]
gi|364502098|dbj|BAL42033.1| COP1, partial [Cardamine bellidifolia]
gi|364502100|dbj|BAL42034.1| COP1, partial [Cardamine bellidifolia]
gi|364502102|dbj|BAL42035.1| COP1, partial [Cardamine bellidifolia]
gi|364502104|dbj|BAL42036.1| COP1, partial [Cardamine bellidifolia]
gi|364502106|dbj|BAL42037.1| COP1, partial [Cardamine bellidifolia]
gi|364502108|dbj|BAL42038.1| COP1, partial [Cardamine bellidifolia]
gi|364502112|dbj|BAL42040.1| COP1, partial [Cardamine bellidifolia]
gi|364502114|dbj|BAL42041.1| COP1, partial [Cardamine bellidifolia]
gi|364502116|dbj|BAL42042.1| COP1, partial [Cardamine bellidifolia]
gi|364502118|dbj|BAL42043.1| COP1, partial [Cardamine bellidifolia]
gi|364502120|dbj|BAL42044.1| COP1, partial [Cardamine bellidifolia]
gi|364502122|dbj|BAL42045.1| COP1, partial [Cardamine bellidifolia]
gi|364502124|dbj|BAL42046.1| COP1, partial [Cardamine bellidifolia]
gi|364502126|dbj|BAL42047.1| COP1, partial [Cardamine bellidifolia]
gi|364502128|dbj|BAL42048.1| COP1, partial [Cardamine bellidifolia]
gi|364502130|dbj|BAL42049.1| COP1, partial [Cardamine alpina]
gi|364502132|dbj|BAL42050.1| COP1, partial [Cardamine alpina]
gi|364502134|dbj|BAL42051.1| COP1, partial [Cardamine alpina]
gi|364502136|dbj|BAL42052.1| COP1, partial [Cardamine resedifolia]
gi|364502138|dbj|BAL42053.1| COP1, partial [Cardamine resedifolia]
gi|364502140|dbj|BAL42054.1| COP1, partial [Cardamine resedifolia]
gi|364502142|dbj|BAL42055.1| COP1, partial [Cardamine resedifolia]
gi|364502144|dbj|BAL42056.1| COP1, partial [Cardamine glauca]
Length = 93
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 60/87 (68%)
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
++ +CCV+++P S+ +A G AD + YD+R + PV VF GH+K V+Y++FL + L
Sbjct: 6 KANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPVHVFSGHKKAVSYVKFLSNNELA 65
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+A TD L+LW+V D+ +RT++GH N
Sbjct: 66 SASTDSTLRLWDVKDNLPVRTFRGHTN 92
>gi|426332829|ref|XP_004027997.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2, partial [Gorilla
gorilla gorilla]
Length = 119
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 9/118 (7%)
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NFVGL+
Sbjct: 1 MVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLA--S 58
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSVCWRRV 337
+G + CGSE N +++Y + + F+ V + + FVS+VCWR +
Sbjct: 59 NGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRAL 116
>gi|364502110|dbj|BAL42039.1| COP1, partial [Cardamine bellidifolia]
Length = 93
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 59/87 (67%)
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
++ +CCV++ P S+ +A G AD + YD+R + PV VF GH+K V+Y++FL + L
Sbjct: 6 KANICCVKYSPGSSNYIAVGSADHHIHYYDLRNISQPVHVFSGHKKAVSYVKFLSNNELA 65
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+A TD L+LW+V D+ +RT++GH N
Sbjct: 66 SASTDSTLRLWDVKDNLPVRTFRGHTN 92
>gi|242063772|ref|XP_002453175.1| hypothetical protein SORBIDRAFT_04g001120 [Sorghum bicolor]
gi|241933006|gb|EES06151.1| hypothetical protein SORBIDRAFT_04g001120 [Sorghum bicolor]
Length = 142
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 19/116 (16%)
Query: 269 TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF----------EP 318
+Y GH + R+FVG+ VWR GL+ GSE+N VFVYD+RW +P+WVH F P
Sbjct: 20 SYSGHASARSFVGMGVWRGAGLVASGSESNHVFVYDLRWAKPIWVHPFFASHGHGGAHGP 79
Query: 319 VTA----AGSERGFVSSVCWRRVGE-----DECTLVAGGSDGLLHVFVGKKKPLSA 365
VT A + GFVS+V WR+ D LVAGGSDG+L VF +++ +A
Sbjct: 80 VTTDAAAAAAAGGFVSAVAWRQGSHNDGDLDGGALVAGGSDGVLKVFTCRRRRETA 135
>gi|2285945|emb|CAA04169.1| COP1 protein [Arabidopsis thaliana]
Length = 89
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 59/87 (67%)
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
+CCV+++ S+ +A G AD + YD+R + P+ VF GH+K V+Y++FL + L +A
Sbjct: 3 ICCVKYNRGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASAS 62
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRN 278
TD L+LW+V D+ +RT++GH N +N
Sbjct: 63 TDSTLRLWDVKDNLPVRTFRGHTNEKN 89
>gi|426332831|ref|XP_004027998.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Gorilla gorilla
gorilla]
Length = 565
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 17/176 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 404 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 457
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 458 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 513
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD Y
Sbjct: 514 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCIY 564
>gi|383931931|gb|AFH57127.1| COP1 protein, partial [Beta vulgaris subsp. vulgaris]
Length = 474
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 88/153 (57%), Gaps = 13/153 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ SV V+ P A H V + I T +KLS L
Sbjct: 335 VSSIEFDRDDELFATAGVSRRIKVFDFSSV-VNEPADA---HCPVVE--ISTLSKLSCLS 388
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W T ++ S DY+G+V +D+ + + E +EH +R WSVD+S +P + SGSDD
Sbjct: 389 WNKFTKNQI-ASSDYEGIVTVWDVTTRQSVMEYEEH-EKRAWSVDFSCTEPSMLVSGSDD 446
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEF 197
+++W K ++V ++ +CCV++
Sbjct: 447 CKVKVW-----CTKQEASVLNIDMKANICCVKY 474
>gi|414077327|ref|YP_006996645.1| WD-40 repeat-containing protein [Anabaena sp. 90]
gi|413970743|gb|AFW94832.1| WD-40 repeat-containing protein [Anabaena sp. 90]
Length = 643
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 128/273 (46%), Gaps = 26/273 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH--PVVAVVDHSKVCDYYICTPAK 99
+D I + F P+ FATG + IR++N+K+ L D P + + K +I
Sbjct: 17 TDWIRAVAFSPTCEFFATGSDDQTIRLWNLKASLNDRNAPGRCIGESLKGHTKWIW---- 72
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGR-RVWSVDYSKGDPVL 157
SL + P G +L SG D +V +D+ + K P F RD G V S+ +S D
Sbjct: 73 --SLAFSP--DGTLLASGSADHIVKLWDVSDVKKPKFLRDLKGHENEVLSISFS-ADGQF 127
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+++W+ + KC T++ V V F G L A+G D +
Sbjct: 128 IASGSADKTVKLWNVKM--RKCTQTLK--GHTDGVESVSFSKDGRYL-ASGSKDATIKIW 182
Query: 218 DVRKMVDP--VLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
D+ K + FD H+K V + F L + LV+ +D + LWNVN I+T +GH
Sbjct: 183 DLEKDEKDKCIKTFDEHQKQVKSVCFSPLSEELLVSGSSDSNIMLWNVNKLEYIKTLEGH 242
Query: 274 VNNRNFVGLSVWRHGGLL-GCGSETNQVFVYDV 305
+ VG S H GL+ G E + ++ V
Sbjct: 243 TDIIESVGFS---HDGLMIASGGEDRETRLWSV 272
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
R L S + DG V +D+EK+ + V SV + KG ++ AS SDD +++W
Sbjct: 298 RNLASANGDGTVRLWDIEKQKECCLALKEHTSAVMSVAFRKGGKII-ASSSDDQNIKLWS 356
Query: 172 PRCDGGKCVSTV-----QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+ D ++ + + + CV F P GS L +AG D K ++V +P
Sbjct: 357 MKKDQEGSITNLVCINTNSEGHKDRIKCVCFSPDGSKLASAG-YDAKIMLWNVDSESNPR 415
Query: 227 LV----FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
L H + + F D L + TDG +KLW+V I +++++ V
Sbjct: 416 LEECQELGRHENQIWSVVFSPDGKLLASCSTDGTIKLWDVTTCECITL----LDHKDEVW 471
Query: 282 LSVWRHGG-LLGCGSETNQVFVYDVR 306
+ H G LL GSE V ++D+R
Sbjct: 472 SVAFNHDGTLLASGSEDKTVKLWDIR 497
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 18/226 (7%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D I + F P S A+ G KI ++N+ S +P + + C ++ S
Sbjct: 380 DRIKCVCFSPDGSKLASAGYDAKIMLWNVDSE--SNPRL------EECQELGRHENQIWS 431
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P G++L S DG + +D+ I D VWSV ++ D L ASGS
Sbjct: 432 VVFSP--DGKLLASCSTDGTIKLWDVTTCECITLLDHKD--EVWSVAFNH-DGTLLASGS 486
Query: 163 DDGTMQMWDPR-CDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
+D T+++WD R K V+ + S + V F+ G +L+A+G D +DV
Sbjct: 487 EDKTVKLWDIRDIRNPKSVTCLHILKGHSEWIWSVAFNHDG-TLLASGSGDNTVRLWDV- 544
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG-TDGCLKLWNVNDSR 265
K + + +F+ H+ V + F ++ +G +D +K+W+V+D R
Sbjct: 545 KTGECLQIFNDHKDCVWTVAFSHNSQMLASGSSDETIKVWDVSDPR 590
>gi|330688325|gb|AEC32933.1| SPA3 isoform 2 [Arabidopsis thaliana]
Length = 662
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 18/134 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICT 96
S+ + + FD +FAT G+ +KI+I+ S++ D +PVV + SK
Sbjct: 534 SNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSK-------- 585
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSSL W ++ S ++DGVV +D+ + + E EH +RVWS+D S DP
Sbjct: 586 ---LSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEHK-KRVWSIDISSADPT 640
Query: 157 LGASGSDDGTMQMW 170
L ASGSDDGT+++W
Sbjct: 641 LLASGSDDGTVKLW 654
>gi|392587073|gb|EIW76408.1| HET-R [Coniophora puteana RWD-64-598 SS2]
Length = 624
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 138/296 (46%), Gaps = 43/296 (14%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV-VAVVDHSKVCDYYIC 95
P S S+ + + P S+ ATG + IR+++ + H V A+ H+
Sbjct: 9 PFEGHSGSVTALAYSPDGSLLATGSLDGTIRVWDAGT---GHQVGEALRKHT-------- 57
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDL--EKKVP-IFERDEHGGRRVWSVDYSK 152
+ +S++ + P G+ L S YDG + +D + VP +F R+ HGG + SV YS
Sbjct: 58 --SGISAVAYSP--DGQHLISSSYDGTLRMWDTATHQTVPRLFTRETHGG--ILSVQYSP 111
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
D L ASG DG + +W+ GKC++ + + V F P G V GC D
Sbjct: 112 -DGALTASGDSDGILCLWEALT--GKCIAFLNHPGR---INSVAFSPSGKR-VTTGCHDW 164
Query: 213 KAYAYDVRKMVDPVLVFD--GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRT 269
YDV++ LVF+ GHR V IR+ D L +A D ++LW+ ++R
Sbjct: 165 LVRVYDVQQ---GELVFELIGHRAFVRSIRYSHDGSLLASASNDHTIRLWDAQTGDLLRV 221
Query: 270 YKGHVNNRNFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGE----PVWVHDFEPVT 320
+GH R++V G+S L S+ + V+D GE P++ H PVT
Sbjct: 222 LRGH---RHYVTGISFSYDNKQLVSSSDDESIRVWDALSGECIVGPLYGHG-GPVT 273
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS DD +++WD VQ S + +L+A+ +D +D
Sbjct: 341 ASAGDDCVVRIWDAETGTESANPLVQHEDEVSGLDISR----NDTLLASAGSDGIICIWD 396
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+++ + GH +V I F D + +AG D +++W+V+ + ++ +NR
Sbjct: 397 LQREELALQPLRGHSGSVLAIIFTPDGMRIASAGYDKTVRIWHVDSGEPLHVFQLEEHNR 456
Query: 278 NFVGLSVWRHGGLLGCGSETNQ--VFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
+ LS+ G L G E+N V ++D+ P+ P++ ++SVC
Sbjct: 457 HTCSLSISVDGSRLASGPESNDRTVSIWDLLTNRPL----SSPISLVYQRT--LTSVC-- 508
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
+ D L++G SD +++
Sbjct: 509 -LSPDGSQLLSGSSDNAAYLW 528
>gi|218438157|ref|YP_002376486.1| hypothetical protein PCC7424_1167 [Cyanothece sp. PCC 7424]
gi|218170885|gb|ACK69618.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
Length = 1163
Score = 82.4 bits (202), Expect = 3e-13, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 30/267 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P D + ATG + +++++I ++ + + H + S+ + P
Sbjct: 809 VSFSPDDKMVATGSDDKTVKLWDIA---INKEITTLRGHQN----------SVLSVSFSP 855
Query: 108 GTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
G++L SG D +D+ K++ FE +H V SV +S L ASGS D
Sbjct: 856 --DGKILASGSSDKTAKLWDMTTGKEITTFEVHQH---PVLSVSFSPDGKTL-ASGSRDN 909
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++WD + GK ++++ + V V F P G +L A+G D +DV +
Sbjct: 910 TVKLWD--VETGKEITSL--PGHQDWVISVSFSPDGKTL-ASGSRDNTVKLWDVETGKE- 963
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ GH+ V + F D TL + D +KLW+V+ + I T++GH + +S
Sbjct: 964 ITSLPGHQDWVISVSFSPDGKTLASGSRDNTVKLWDVDTGKEITTFEGH--QHLVLSVSF 1021
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPV 311
G +L GS+ N V ++DV G+ +
Sbjct: 1022 SPDGKILASGSDDNTVKLWDVDTGKEI 1048
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 90/382 (23%), Positives = 160/382 (41%), Gaps = 88/382 (23%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNI------KSVLVDHPVVAV-----------VD 85
DSI I F P + A+G + I+I+ + K++ P+++V
Sbjct: 637 DSINSISFSPDSKMIASGSNDKTIKIWYLTKRQRPKNLRYHQPILSVSFSPDGKTIASSS 696
Query: 86 HSKVCDYY-ICTPAKLSSLK----WKPGTS----GRVLGSGDYDGVVMEYDLE--KKVPI 134
+SK + + +LK W S G+ L SG D + +D+ K+V
Sbjct: 697 YSKTIKLWDVAKDKPFQTLKGHKDWVTDVSFSPDGKFLVSGSGDETIKLWDVTKGKEVKT 756
Query: 135 FERDEH---------GGR-----------RVWS-------------------VDYSKGDP 155
F H G+ ++WS V +S D
Sbjct: 757 FIGHLHWVVSVNFSFDGKTIVSSSKDQMIKLWSVLEGKELMTLTGHQNMVSNVSFSPDDK 816
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
++ A+GSDD T+++WD + K ++T++ +++V V F P G ++A+G +DK A
Sbjct: 817 MV-ATGSDDKTVKLWDIAIN--KEITTLR--GHQNSVLSVSFSPDG-KILASGSSDKTAK 870
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D+ + + F+ H+ V + F D TL + D +KLW+V + I + GH
Sbjct: 871 LWDMTTGKE-ITTFEVHQHPVLSVSFSPDGKTLASGSRDNTVKLWDVETGKEITSLPGHQ 929
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCW 334
+ + +S G L GS N V ++DV G + +T+ + +V SV +
Sbjct: 930 D--WVISVSFSPDGKTLASGSRDNTVKLWDVETG--------KEITSLPGHQDWVISVSF 979
Query: 335 RRVGEDECTLVAGGSDGLLHVF 356
G+ TL +G D + ++
Sbjct: 980 SPDGK---TLASGSRDNTVKLW 998
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 38/308 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ I F P + A+G + I+++++ + + H ++S+
Sbjct: 596 SVNCISFSPDGKILASGSADQTIKLWDVTTW---QEIKTFTGHRD----------SINSI 642
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P + +++ SG D + + L K+ H + + SV +S + AS S
Sbjct: 643 SFSPDS--KMIASGSNDKTIKIWYLTKRQRPKNLRYH--QPILSVSFSPDGKTI-ASSSY 697
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
T+++WD D K T++ + V V F P G LV+ G D+ +DV K
Sbjct: 698 SKTIKLWDVAKD--KPFQTLK--GHKDWVTDVSFSPDGKFLVS-GSGDETIKLWDVTKGK 752
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ V F GH V + F D T+V++ D +KLW+V + + + T GH N + V
Sbjct: 753 E-VKTFIGHLHWVVSVNFSFDGKTIVSSSKDQMIKLWSVLEGKELMTLTGHQNMVSNVSF 811
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDEC 342
S ++ GS+ V ++D+ + + + RG +SV D
Sbjct: 812 S--PDDKMVATGSDDKTVKLWDIAINKEI-----------TTLRGHQNSVLSVSFSPDGK 858
Query: 343 TLVAGGSD 350
L +G SD
Sbjct: 859 ILASGSSD 866
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 26/197 (13%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V S+ +S L AS SDD T+++WD + + + +V C+ F P G +
Sbjct: 555 VNSISFSPDGKTL-ASSSDDNTIKIWDI----ATAKELITLTGHQKSVNCISFSPDG-KI 608
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
+A+G AD+ +DV + + F GHR ++ I F ++ +G+ D +K+W +
Sbjct: 609 LASGSADQTIKLWDVTTWQE-IKTFTGHRDSINSISFSPDSKMIASGSNDKTIKIWYLTK 667
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--------WVHD 315
+ + + H + + +S G + S + + ++DV +P WV D
Sbjct: 668 RQRPKNLRYH---QPILSVSFSPDGKTIASSSYSKTIKLWDVAKDKPFQTLKGHKDWVTD 724
Query: 316 --FEP-----VTAAGSE 325
F P V+ +G E
Sbjct: 725 VSFSPDGKFLVSGSGDE 741
Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
F GH+ +V I F D TL ++ D +K+W++ ++ + T GH + N + S
Sbjct: 548 FIGHKNSVNSISFSPDGKTLASSSDDNTIKIWDIATAKELITLTGHQKSVNCISFS--PD 605
Query: 288 GGLLGCGSETNQVFVYDV-RWGE 309
G +L GS + ++DV W E
Sbjct: 606 GKILASGSADQTIKLWDVTTWQE 628
>gi|218437121|ref|YP_002375450.1| hypothetical protein PCC7424_0112 [Cyanothece sp. PCC 7424]
gi|218169849|gb|ACK68582.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
Length = 1236
Score = 82.4 bits (202), Expect = 3e-13, Method: Composition-based stats.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 16/269 (5%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + P A+ + I+++N+K+ + + + P+ ++
Sbjct: 827 SVRSVSISPDGKTLASWSWDKTIKLWNLKTGKEIRTLTGYDSYVNSVSFSPIPPSPVTK- 885
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
G +GR+L SG DG + ++LE I H + VWSV +S L ASGS
Sbjct: 886 ----GGAGRILASGSQDGTIKLWNLESGTEIRTLKGHD-QTVWSVSFSLDGKTL-ASGSV 939
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++W+ + G + T++ V V F P G +L A+G DK ++
Sbjct: 940 DKTIKLWN--LESGTEIRTLK--GHDQTVWSVSFSPNGKTL-ASGSVDKTIKLSNLESGA 994
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ + GH ++T + F D TL + D +KLWN+ + IRT KGH ++ N V +
Sbjct: 995 E-IRTLKGHDSSITSVSFSPDGKTLASGSMDKTIKLWNLETGKEIRTLKGHDDSVNSVSI 1053
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L GS+ + + ++ G +
Sbjct: 1054 S--PDGKTLASGSDDKTIKLSNLESGTEI 1080
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 70/254 (27%), Positives = 111/254 (43%), Gaps = 26/254 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P+ A+G + + I++ N++S + + H + ++S+ + P
Sbjct: 967 VSFSPNGKTLASGSVDKTIKLSNLES---GAEIRTLKGHD----------SSITSVSFSP 1013
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG D + ++LE I H V SV S L ASGSDD T+
Sbjct: 1014 --DGKTLASGSMDKTIKLWNLETGKEIRTLKGHDDS-VNSVSISPDGKTL-ASGSDDKTI 1069
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++ + G + T++ AV V F P G +L A+G D ++++ + +
Sbjct: 1070 KL--SNLESGTEIRTLK--GHDDAVNSVSFSPNGKTL-ASGSRDNTVKLWNLQSGAE-IR 1123
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH TV + F D TL + DG +KLWN+ I T KGH N+ V S
Sbjct: 1124 TIRGHDDTVWSVSFSPDGKTLASGSWDGTIKLWNLERGEEILTLKGHDNSVWSVSFS--P 1181
Query: 287 HGGLLGCGSETNQV 300
G L GSE +
Sbjct: 1182 DGKTLASGSEDKTI 1195
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D + ++LE I H V SV +S L AS S D T+++W
Sbjct: 617 GKTLASGSGDNTIKLWNLETGEQIRTLKGHE-ETVTSVSFSPDGKTL-ASWSYDKTIKLW 674
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ + G+ + T+ + V V F P G + A+G DK +++ + +
Sbjct: 675 N--LETGQEIRTL--TGHDYYVNSVSFSPDGK-IWASGSVDKTIKLWNLETGQE-IRTLT 728
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS------ 283
GH V + F D TL + DG +K+WN+ + IRT KGH N+ N V S
Sbjct: 729 GHDYYVNSVSFSPDGKTLASGSQDGTIKVWNLETGKEIRTLKGHDNSVNSVSFSPIPPSP 788
Query: 284 VWR--HGGLLGCGSETNQVFVYDVRWGEPVWV---HDFEPVTAAGSERG 327
V + GG+L GS + ++++ G+ + HD+ + + S G
Sbjct: 789 VTKGGAGGILASGSNDGTIKLWNLESGQEIRTLQGHDYSVRSVSISPDG 837
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 60/269 (22%), Positives = 111/269 (41%), Gaps = 56/269 (20%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+++ + F P A+ + I+++N+++ + + H DYY+ +S
Sbjct: 648 ETVTSVSFSPDGKTLASWSYDKTIKLWNLET---GQEIRTLTGH----DYYV------NS 694
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P G++ SG D + ++LE I H V SV +S L ASGS
Sbjct: 695 VSFSP--DGKIWASGSVDKTIKLWNLETGQEIRTLTGHD-YYVNSVSFSPDGKTL-ASGS 750
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DGT+++W+ + GK + T++ ++V V F P S V G A
Sbjct: 751 QDGTIKVWN--LETGKEIRTLK--GHDNSVNSVSFSPIPPSPVTKGGAG----------- 795
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
L + DG +KLWN+ + IRT +GH + + +
Sbjct: 796 ----------------------GILASGSNDGTIKLWNLESGQEIRTLQGH--DYSVRSV 831
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S+ G L S + +++++ G+ +
Sbjct: 832 SISPDGKTLASWSWDKTIKLWNLKTGKEI 860
Score = 47.4 bits (111), Expect = 0.012, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
DS+ + P A+G + I++ N++S + + H ++S
Sbjct: 1046 DSVNSVSISPDGKTLASGSDDKTIKLSNLES---GTEIRTLKGHDDA----------VNS 1092
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P +G+ L SG D V ++L+ I H VWSV +S L ASGS
Sbjct: 1093 VSFSP--NGKTLASGSRDNTVKLWNLQSGAEIRTIRGHDD-TVWSVSFSPDGKTL-ASGS 1148
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
DGT+++W+ + G+ + T++ ++V V F P G +L A+G DK
Sbjct: 1149 WDGTIKLWN--LERGEEILTLK--GHDNSVWSVSFSPDGKTL-ASGSEDK 1193
Score = 43.5 bits (101), Expect = 0.16, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D++ + F P+ A+G ++++N++S + + H + S
Sbjct: 1088 DAVNSVSFSPNGKTLASGSRDNTVKLWNLQS---GAEIRTIRGHDDT----------VWS 1134
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P G+ L SG +DG + ++LE+ I H VWSV +S L ASGS
Sbjct: 1135 VSFSP--DGKTLASGSWDGTIKLWNLERGEEILTLKGHDN-SVWSVSFSPDGKTL-ASGS 1190
Query: 163 DDGTMQ 168
+D T++
Sbjct: 1191 EDKTIK 1196
>gi|307152491|ref|YP_003887875.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306982719|gb|ADN14600.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
Length = 1270
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 80/316 (25%), Positives = 138/316 (43%), Gaps = 43/316 (13%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + + S N D + + F P + A+G + I+++++++ +
Sbjct: 931 WDVQTGQLIRTLSGHN----DGVSSVSFSPDGKILASGSGDKTIKLWDVQT---GQLIRT 983
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H+ V + S+ + P G++L SG D + +D++ I H
Sbjct: 984 LSGHNDV----------VWSVSFSP--DGKILASGSGDKTIKLWDVQTGQQIRTLSRHND 1031
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
VWSV +S +L ASGS D T+++WD + G+ + T+ S +V V F G
Sbjct: 1032 S-VWSVSFSPDGKIL-ASGSGDKTIKLWDVQT--GQQIRTL--SRHNDSVLSVSFSGDGK 1085
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
++A+G DK +DV+ + H +V + F D L + D +KLW+V
Sbjct: 1086 -ILASGSRDKTIKLWDVQTG-QQIRTLSRHNDSVLSVSFSGDGKILASGSRDTSIKLWDV 1143
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------V 311
++IRT GH N +S G +L GS + ++DV+ G+ V
Sbjct: 1144 QTGQLIRTLSGH--NEYVRSVSFSPDGKILASGSRDTSIKLWDVQTGQQIRTLSGHNDVV 1201
Query: 312 WVHDFEP---VTAAGS 324
W F P + A+GS
Sbjct: 1202 WSVSFSPDGKILASGS 1217
Score = 70.9 bits (172), Expect = 9e-10, Method: Composition-based stats.
Identities = 80/326 (24%), Positives = 139/326 (42%), Gaps = 53/326 (16%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD +S+ S N DS+ + F P + A+G + I+++++++ +
Sbjct: 711 WDVQTGKEISTLSGHN----DSVYSVSFSPDGKILASGSGDKTIKLWDVQT---GQEIRT 763
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H+ + S+ + P G++L SG + +D++ I H
Sbjct: 764 LSGHND----------SVYSVSFSP--DGKILASGSGYKTIKLWDVQTGQEIRTLSGHND 811
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V SV +S GD + ASGS D T+++WD + G+ + T+ S +V V F G
Sbjct: 812 S-VLSVSFS-GDGKILASGSRDKTIKLWDVQT--GQEIRTL--SGHNDSVLSVSFSGDGK 865
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-----------DTLVTAG 251
++A+G DK +DV+ + GH V+ + F + L +
Sbjct: 866 -ILASGSWDKTIKLWDVQTG-QLIRTLSGHNDGVSSVSFSPIPPSPVTKGGAGGILASGS 923
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE-- 309
D +KLW+V ++IRT GH N +S G +L GS + ++DV+ G+
Sbjct: 924 RDTSIKLWDVQTGQLIRTLSGH--NDGVSSVSFSPDGKILASGSGDKTIKLWDVQTGQLI 981
Query: 310 --------PVWVHDFEP---VTAAGS 324
VW F P + A+GS
Sbjct: 982 RTLSGHNDVVWSVSFSPDGKILASGS 1007
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 72/296 (24%), Positives = 135/296 (45%), Gaps = 36/296 (12%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + + S N DS+ + F + A+G + I+++++++ +
Sbjct: 669 WDVQTGQEIRTLSGHN----DSVYSVSFSGDGKILASGSRDKTIKLWDVQT---GKEIST 721
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H+ + S+ + P G++L SG D + +D++ I H
Sbjct: 722 LSGHND----------SVYSVSFSP--DGKILASGSGDKTIKLWDVQTGQEIRTLSGHND 769
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V+SV +S +L ASGS T+++WD + G+ + T+ S +V V F G
Sbjct: 770 S-VYSVSFSPDGKIL-ASGSGYKTIKLWDVQT--GQEIRTL--SGHNDSVLSVSFSGDGK 823
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNV 261
++A+G DK +DV+ + + GH +V + F ++ +G+ D +KLW+V
Sbjct: 824 -ILASGSRDKTIKLWDVQTGQE-IRTLSGHNDSVLSVSFSGDGKILASGSWDKTIKLWDV 881
Query: 262 NDSRVIRTYKGHVNNRNFVGLS------VWR--HGGLLGCGSETNQVFVYDVRWGE 309
++IRT GH + + V S V + GG+L GS + ++DV+ G+
Sbjct: 882 QTGQLIRTLSGHNDGVSSVSFSPIPPSPVTKGGAGGILASGSRDTSIKLWDVQTGQ 937
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 135 FERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCC 194
+ R E V SV +S +L ASGS D T+++WD + G+ + T+ S +V
Sbjct: 635 YNRLERHNDSVTSVSFSPDGKIL-ASGSWDKTIKLWDVQT--GQEIRTL--SGHNDSVYS 689
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTD 253
V F G ++A+G DK +DV+ + + GH +V + F D L + D
Sbjct: 690 VSFSGDG-KILASGSRDKTIKLWDVQTGKE-ISTLSGHNDSVYSVSFSPDGKILASGSGD 747
Query: 254 GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+KLW+V + IRT GH N + +S G +L GS + ++DV+ G+ +
Sbjct: 748 KTIKLWDVQTGQEIRTLSGH--NDSVYSVSFSPDGKILASGSGYKTIKLWDVQTGQEI 803
Score = 38.9 bits (89), Expect = 4.1, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 21/149 (14%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + + S N DS+ + F + A+G I+++++++ +
Sbjct: 1099 WDVQTGQQIRTLSRHN----DSVLSVSFSGDGKILASGSRDTSIKLWDVQT---GQLIRT 1151
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H++ + S+ + P G++L SG D + +D++ I H
Sbjct: 1152 LSGHNEY----------VRSVSFSP--DGKILASGSRDTSIKLWDVQTGQQIRTLSGHND 1199
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
VWSV +S +L ASGS D ++++WD
Sbjct: 1200 V-VWSVSFSPDGKIL-ASGSRDTSIKLWD 1226
>gi|428208282|ref|YP_007092635.1| WD-40 repeat-containing protein [Chroococcidiopsis thermalis PCC
7203]
gi|428010203|gb|AFY88766.1| WD-40 repeat-containing protein [Chroococcidiopsis thermalis PCC
7203]
Length = 1187
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 26/266 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P + A G +IR+Y + PV+ H+ ++SL
Sbjct: 574 VASVAFSPDGKLLAMGDSNGEIRLYQVAD---GKPVLTCQAHNNW----------VTSLA 620
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G L SG D V +++ + H VWSV +S +L ASGSDD
Sbjct: 621 FSP--DGSTLASGSSDSKVKLWEIATGQCLHTLQGHENE-VWSVAWSPDGNIL-ASGSDD 676
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
++++W GKC+ Q + V + F P G ++A+G AD +++ +
Sbjct: 677 FSIRLWS--VHNGKCLKIFQGHTNH--VVSIVFSPDGK-MLASGSADNTIRLWNINTG-E 730
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
F+GH + I F D TL + D +KLW++ + ++T++GHVN V +
Sbjct: 731 CFKTFEGHTNPIRLITFSPDGQTLASGSEDRTVKLWDLGSGQCLKTFQGHVNGVWSVAFN 790
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGE 309
G LL GS V ++DV GE
Sbjct: 791 --PQGNLLASGSLDQTVKLWDVSTGE 814
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 32/268 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F P + A+G IR++NI + H+ +P
Sbjct: 703 IVFSPDGKMLASGSADNTIRLWNINT---GECFKTFEGHTNPIRLITFSP---------- 749
Query: 108 GTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
G+ L SG D V +DL + + F+ +G VWSV ++ +L ASGS D
Sbjct: 750 --DGQTLASGSEDRTVKLWDLGSGQCLKTFQGHVNG---VWSVAFNPQGNLL-ASGSLDQ 803
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++WD G+C T Q +S V + F P G L A+G D+ ++V
Sbjct: 804 TVKLWD--VSTGECRKTFQGHSS--WVFSIAFSPQGDFL-ASGSRDQTVRLWNVNTGF-C 857
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
F G+ + F D T+ + D ++LWNV+ + ++T++GH R V
Sbjct: 858 CKTFQGYINQTLSVAFCPDGQTIASGSHDSSVRLWNVSTGQTLKTFQGH---RAAVQSVA 914
Query: 285 WR-HGGLLGCGSETNQVFVYDVRWGEPV 311
W G L GS+ + V ++DV G+ +
Sbjct: 915 WSPDGQTLASGSQDSSVRLWDVGTGQAL 942
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 120/307 (39%), Gaps = 68/307 (22%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G +R++N+ + + + A + S+ W P
Sbjct: 871 VAFCPDGQTIASGSHDSSVRLWNVST-------------GQTLKTFQGHRAAVQSVAWSP 917
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG D V +D+ + HG +WS+ +S +L AS S+D T+
Sbjct: 918 --DGQTLASGSQDSSVRLWDVGTGQALRICQGHGAA-IWSIAWSPDSQML-ASSSEDRTI 973
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD G+ + T Q R+A+ V F P G ++A+G D+ +DV +
Sbjct: 974 KLWD--VSTGQALKTFQ--GHRAAIWSVAFSPCGR-MLASGSLDQTLKLWDV-STDKCIK 1027
Query: 228 VFDGHRKTVTYI-----------------------------RFLDVDT------------ 246
+GH + + R + VDT
Sbjct: 1028 TLEGHTNWIWSVAWSQDGELIASTSPDGTLRLWSVSTGECKRIIQVDTGWLQLVAFSPDS 1087
Query: 247 --LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
L ++ D LKLW+V+ ++T GH V S R +L GSE + ++D
Sbjct: 1088 QTLASSSQDYTLKLWDVSTGECLKTLLGHTGLIWSVAWS--RDNPILASGSEDETIRLWD 1145
Query: 305 VRWGEPV 311
++ GE V
Sbjct: 1146 IKTGECV 1152
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 24/229 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F P A+G + +R++N+ + C + + S+ + P
Sbjct: 829 IAFSPQGDFLASGSRDQTVRLWNVNTGFC-------------CKTFQGYINQTLSVAFCP 875
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ + SG +D V +++ + H V SV +S L ASGS D ++
Sbjct: 876 --DGQTIASGSHDSSVRLWNVSTGQTLKTFQGHRAA-VQSVAWSPDGQTL-ASGSQDSSV 931
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD G+ + Q + A+ + + P S ++A+ D+ +DV +
Sbjct: 932 RLWD--VGTGQALRICQGHGA--AIWSIAWSP-DSQMLASSSEDRTIKLWDV-STGQALK 985
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
F GHR + + F ++ +G+ D LKLW+V+ + I+T +GH N
Sbjct: 986 TFQGHRAAIWSVAFSPCGRMLASGSLDQTLKLWDVSTDKCIKTLEGHTN 1034
>gi|145508654|ref|XP_001440272.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407487|emb|CAK72875.1| unnamed protein product [Paramecium tetraurelia]
Length = 1142
Score = 80.1 bits (196), Expect = 2e-12, Method: Composition-based stats.
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 37/311 (11%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + A+G + IR++++ + + HS Y +C + P
Sbjct: 472 FSPDGTTLASGSDDKSIRLWSVNT---GQQKTKLNGHSSYV-YTVC---------FSP-- 516
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G +L SG YD + +D+ + D H G V+ V +S L ASGSD ++ +
Sbjct: 517 DGTILASGSYDNSIHLWDVATVSLKAKLDGHSGY-VYEVCFSPDGTKL-ASGSDAKSIHL 574
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + + V F P G++L A+G ADK + +DV+K + F
Sbjct: 575 WDVKTGQQK----AKFEGHSGGILSVCFSPDGNTL-ASGSADKSIHLWDVKKG-EQKAKF 628
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
DGH+ +VT +RF T++ +G+ D ++LW+V + GH + V S G
Sbjct: 629 DGHQYSVTSVRFSPDGTILASGSADKTIRLWDVKTGQQKTKLDGHSSLVLLVCFS--PDG 686
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
L GS+ N + ++DV+ G+ D G + SVC+ D TL +G
Sbjct: 687 TTLASGSDDNSIRLWDVKTGQQNAKFD--------GHSGRILSVCF---SPDGATLASGS 735
Query: 349 SDGLLHVFVGK 359
+D + ++ K
Sbjct: 736 ADETIRLWDAK 746
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 91/364 (25%), Positives = 143/364 (39%), Gaps = 76/364 (20%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P ++ A+G + IR++++K+ + HS + +P
Sbjct: 634 SVTSVRFSPDGTILASGSADKTIRLWDVKT---GQQKTKLDGHSSLVLLVCFSP------ 684
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
G L SG D + +D++ + D H GR + SV +S L ASGS
Sbjct: 685 ------DGTTLASGSDDNSIRLWDVKTGQQNAKFDGHSGR-ILSVCFSPDGATL-ASGSA 736
Query: 164 DGTMQMWDPRC---------------------DGGKCVS-------------TVQPSAS- 188
D T+++WD + DG K S T Q A
Sbjct: 737 DETIRLWDAKTGQQLVKLNGHSSQVLSVCFSPDGTKLASGSDAKSIYLWDVKTGQQKAKF 796
Query: 189 ---RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD 245
+ V F P G++L A+G ADK +DV+ FDGH+ TVT +RF
Sbjct: 797 DGHSGGILSVCFSPDGTTL-ASGSADKSIRLWDVKTGYQKA-KFDGHQYTVTSVRFSLDG 854
Query: 246 TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV-W-------RHGGLLGCGSET 297
TL + D + LWNV + H N + S W G +L GS+
Sbjct: 855 TLASCSYDKFISLWNVKIGQQKTKLDSHFGQDNTIRFSPRWVCAICFSPDGNILAFGSKD 914
Query: 298 NQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFV 357
+ + + DV+ G ++ G + V+SVC+ D TL + D + ++
Sbjct: 915 HSIRLLDVKTG-------YQKAKLDGHTQK-VNSVCF---SPDGTTLASCSDDNTIRLWK 963
Query: 358 GKKK 361
KKK
Sbjct: 964 VKKK 967
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 85/341 (24%), Positives = 136/341 (39%), Gaps = 57/341 (16%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYIC-TP--A 98
S + + F P ++ A+G I ++++ +V + A +D Y +C +P
Sbjct: 506 SSYVYTVCFSPDGTILASGSYDNSIHLWDVATV----SLKAKLDGHSGYVYEVCFSPDGT 561
Query: 99 KLSSLK-------WKPGT---------------------SGRVLGSGDYDGVVMEYDLEK 130
KL+S W T G L SG D + +D++K
Sbjct: 562 KLASGSDAKSIHLWDVKTGQQKAKFEGHSGGILSVCFSPDGNTLASGSADKSIHLWDVKK 621
Query: 131 KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS 190
+ D H V SV +S +L ASGS D T+++WD + K + S
Sbjct: 622 GEQKAKFDGH-QYSVTSVRFSPDGTIL-ASGSADKTIRLWDVKTGQQK----TKLDGHSS 675
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVT 249
V V F P G++L A+G D +DV K FDGH + + F D TL +
Sbjct: 676 LVLLVCFSPDGTTL-ASGSDDNSIRLWDV-KTGQQNAKFDGHSGRILSVCFSPDGATLAS 733
Query: 250 AGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
D ++LW+ + + GH + V S G L GS+ ++++DV+ G+
Sbjct: 734 GSADETIRLWDAKTGQQLVKLNGHSSQVLSVCFS--PDGTKLASGSDAKSIYLWDVKTGQ 791
Query: 310 PVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
D G + SVC+ D TL +G +D
Sbjct: 792 QKAKFD--------GHSGGILSVCF---SPDGTTLASGSAD 821
>gi|414077274|ref|YP_006996592.1| WD-40 repeat-containing protein [Anabaena sp. 90]
gi|413970690|gb|AFW94779.1| WD-40 repeat-containing protein [Anabaena sp. 90]
Length = 1609
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 78/264 (29%), Positives = 116/264 (43%), Gaps = 28/264 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G + I+I+++ + KV + +SS+ + P
Sbjct: 990 VGFSPDGQQLASGSGDKTIKIWDVTT-------------GKVLNTLKGHKGWVSSVGFSP 1036
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG D + +D+ + H G VWSV +S L ASGS D T+
Sbjct: 1037 --DGQKLASGSADKTIKIWDVTTGKVLNTLKGHEGV-VWSVGFSPDGQQL-ASGSGDKTI 1092
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD GK ++T++ S V VEF P G L A+G ADK +DV VL
Sbjct: 1093 KIWD--VTTGKVLNTLK--GHESTVSSVEFSPDGQQL-ASGSADKTIKIWDV--TTGKVL 1145
Query: 228 -VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
GH V + F D L + D +K+W+V +V+ T KGH VG S
Sbjct: 1146 NTLKGHEGEVISVGFSPDGQQLASGSDDKTIKIWDVTTGKVLNTLKGHKGEVYSVGFS-- 1203
Query: 286 RHGGLLGCGSETNQVFVYDVRWGE 309
G L GS + ++DV G+
Sbjct: 1204 PDGQKLASGSADKTIKIWDVTTGK 1227
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 28/264 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G + I+I+++ + KV + + +SS+++ P
Sbjct: 1074 VGFSPDGQQLASGSGDKTIKIWDVTT-------------GKVLNTLKGHESTVSSVEFSP 1120
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG D + +D+ + H G V SV +S L ASGSDD T+
Sbjct: 1121 --DGQQLASGSADKTIKIWDVTTGKVLNTLKGHEGE-VISVGFSPDGQQL-ASGSDDKTI 1176
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD GK ++T++ + V V F P G L A+G ADK +DV VL
Sbjct: 1177 KIWD--VTTGKVLNTLK--GHKGEVYSVGFSPDGQKL-ASGSADKTIKIWDV--TTGKVL 1229
Query: 228 -VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
GH V + F D + + D +K+W+V +V+ T KGH + VG S
Sbjct: 1230 NTLKGHEGWVRSVGFSPDGKKMASGSADKTIKIWDVTTGKVLNTLKGHESTVWSVGFS-- 1287
Query: 286 RHGGLLGCGSETNQVFVYDVRWGE 309
G L GS + ++DV G+
Sbjct: 1288 PDGQKLASGSGDKTIKIWDVTTGK 1311
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 29/260 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G + I+I+++ + KV + + S+ + P
Sbjct: 1284 VGFSPDGQKLASGSGDKTIKIWDVTT-------------GKVLNTLKGHEGWVRSVGFSP 1330
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG D + +D+ + H G V SV +S L ASGS D T+
Sbjct: 1331 --DGKKLASGSGDKTIKIWDVTTGKVLNTLKGHEGW-VRSVGFSPDGKKL-ASGSGDKTI 1386
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD GK ++T++ + SR V F P G L A+G D +DV VL
Sbjct: 1387 KIWD--VTTGKVLNTLKDNESR---LIVGFSPDGKQL-ASGSFDNTIKIWDV--TTGKVL 1438
Query: 228 -VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
GH V + F D L + D +K+W+V +V+ T KGH VG S
Sbjct: 1439 NTLKGHEGLVYSVGFSPDGKQLASGSDDKTIKIWDVTTGKVLNTLKGHEREVRSVGFS-- 1496
Query: 286 RHGGLLGCGSETNQVFVYDV 305
G L GS + ++D+
Sbjct: 1497 PDGKKLASGSADKTIILWDL 1516
>gi|440682021|ref|YP_007156816.1| WD-40 repeat-containing protein [Anabaena cylindrica PCC 7122]
gi|428679140|gb|AFZ57906.1| WD-40 repeat-containing protein [Anabaena cylindrica PCC 7122]
Length = 1578
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 89/341 (26%), Positives = 143/341 (41%), Gaps = 58/341 (17%)
Query: 23 WDFN---LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSV----- 74
WD N LRT D + I F P ATG I+++N+K+
Sbjct: 1161 WDLNGKKLRTFKGHE--------DQVTTIVFSPDGQTLATGSEDTTIKLWNVKTAKKLQS 1212
Query: 75 ------LV-------DHPVVAVVDHSKVCDYYICTPAKLSSLKWKP--------GTSGRV 113
L+ D +A V K + +L +LK + G
Sbjct: 1213 FNRHQALIKNVIFSPDGKTLASVSDDKTVKLWDLQGNELQTLKDQEFGFSSVVFSPDGHY 1272
Query: 114 LGSGDYDGVVMEYDLE-KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
L +G YD V +DL+ K++ + + G R S +S L A+ SDD T+++WD
Sbjct: 1273 LATGSYDKTVKLWDLKGKQLQTLKGHQQGVR---SAVFSPDGQSL-ATASDDKTIKLWD- 1327
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
+ GK T++ ++ V V F P G L +A DK +D++ +P +F GH
Sbjct: 1328 -VNNGKLRQTLK--GHQNKVTSVVFSPDGQRLASAS-DDKTVKLWDLKNGKEP-QIFKGH 1382
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
+ VT + F + TL TA D LW++ + + + +KGH N V S +G L
Sbjct: 1383 KNRVTSVVFSPNGKTLATASNDKTAILWDLKNGKEPQIFKGHTNKVTSVVFS--PNGETL 1440
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSV 332
S+ V ++D++ G+ EP G ++ +S V
Sbjct: 1441 ASASDDKTVILWDLKNGK-------EPQIFKGHKKQVISVV 1474
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 76/311 (24%), Positives = 135/311 (43%), Gaps = 47/311 (15%)
Query: 10 PQAET----TNERARCEWDF--NLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
P+A+T +N+ WD NL T S + + + F P AT
Sbjct: 1103 PKADTLATVSNQNIVKFWDLKRNLLQTFKDSD-------EQVTNVVFSPDGQTLATASEG 1155
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
+ ++++++ + K + +++++ + P G+ L +G D +
Sbjct: 1156 KTVKLWDL--------------NGKKLRTFKGHEDQVTTIVFSP--DGQTLATGSEDTTI 1199
Query: 124 MEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVS 181
++++ KK+ F R + + +V +S L AS SDD T+++WD + G +
Sbjct: 1200 KLWNVKTAKKLQSFNRHQ---ALIKNVIFSPDGKTL-ASVSDDKTVKLWDLQ---GNELQ 1252
Query: 182 TVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
T++ V F P G L A G DK +D++ + GH++ V F
Sbjct: 1253 TLKDQ--EFGFSSVVFSPDGHYL-ATGSYDKTVKLWDLKG--KQLQTLKGHQQGVRSAVF 1307
Query: 242 L-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
D +L TA D +KLW+VN+ ++ +T KGH N V S G L S+ V
Sbjct: 1308 SPDGQSLATASDDKTIKLWDVNNGKLRQTLKGHQNKVTSVVFS--PDGQRLASASDDKTV 1365
Query: 301 FVYDVRWG-EP 310
++D++ G EP
Sbjct: 1366 KLWDLKNGKEP 1376
Score = 38.5 bits (88), Expect = 4.9, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVT 249
A+ V F P G +LV+AG DK +D++ V + F GH VT + F +TL +
Sbjct: 972 AIKSVIFSPDGKTLVSAG-DDKTFKLWDLKGNV--LQTFSGHEDAVTSVVFSPQGNTLAS 1028
Query: 250 AGTDGCLKLWNV 261
G D +KLW++
Sbjct: 1029 VGNDKTVKLWDL 1040
>gi|443652967|ref|ZP_21130939.1| WD domain, G-beta repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|159028403|emb|CAO89845.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443334193|gb|ELS48718.1| WD domain, G-beta repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 1201
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 78/284 (27%), Positives = 122/284 (42%), Gaps = 27/284 (9%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + + S N V+ + F P ATG + I+++N+++ +
Sbjct: 597 WDVETGQEIRTLSGHNGKVNS----VSFSPDGKTLATGSEDKTIKLWNVET---GEEIGT 649
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H D Y+ + + G+ L +G DG + +D+E I H G
Sbjct: 650 LSGH----DGYVFSVSF--------SRDGKTLATGSDDGTIKLWDVETGQEIRTLSGHNG 697
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+V SV +S L A SD GT+++W + GK + T+ +R V V F G
Sbjct: 698 -KVNSVSFSSDGKTL-AFDSDGGTIKLWYIDIETGKEIRTLS-EWNRGCVYSVSFSNDGK 754
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
+L A G ADK ++V + + + GH V + F D TL T D +KLWNV
Sbjct: 755 TL-ATGSADKTIKLWNV-ETGEEIRTLSGHNGKVNSVSFSSDGKTLATGSADKTIKLWNV 812
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+ IRT GH N +S G L GS N + +++V
Sbjct: 813 ETGKEIRTLSGH--NGEVHSVSFRSDGKTLASGSSDNTIKLWNV 854
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 86/308 (27%), Positives = 139/308 (45%), Gaps = 35/308 (11%)
Query: 57 FATGGIARKIRIYNIKS-----VLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSG 111
ATG I ++N+ + L+ H + + +C IC+ + + + P G
Sbjct: 882 LATGSDDTTIELWNVGTGKEMRTLIGH------NSTGLCQLEICSELAVYRVSFSP--DG 933
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+ L + D + +++E I H G V SV +S L A+GS D T+++W+
Sbjct: 934 KTLATSSDDNTIKLWNVETGQEIGTLRGHNGI-VLSVSFSPDGKSL-ATGSWDKTIKLWN 991
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
+ G+ + T++ S+V V F P G +LV+ G DK +DV + + G
Sbjct: 992 --VETGQEIRTLK--GHDSSVYSVNFSPDGKTLVS-GSVDKTIKLWDVETGKE-IRTLSG 1045
Query: 232 HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
H V+ + F D TL T DG +KLWN + + IRT GH + +S G
Sbjct: 1046 HNSYVSSVSFSSDGKTLATGSYDGTIKLWNGSTGQEIRTLSGH--DGYVFSVSFSSDGKT 1103
Query: 291 LGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
L GSE + ++DV GE E T +G + G+V SV + G+ TL G D
Sbjct: 1104 LATGSEDKTIKLWDVETGE-------EIRTLSGHD-GYVFSVSFSSDGK---TLATGSED 1152
Query: 351 GLLHVFVG 358
+ ++ G
Sbjct: 1153 KTIKLWNG 1160
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 23/261 (8%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
K++S+ + P G+ L +G D + +++E I H G V+SV +S+ L
Sbjct: 613 GKVNSVSFSP--DGKTLATGSEDKTIKLWNVETGEEIGTLSGHDGY-VFSVSFSRDGKTL 669
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV-AAGCADKKAYA 216
A+GSDDGT+++WD + G+ + T+ S V V F G +L + K +
Sbjct: 670 -ATGSDDGTIKLWD--VETGQEIRTL--SGHNGKVNSVSFSSDGKTLAFDSDGGTIKLWY 724
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
D+ + + + +R V + F D TL T D +KLWNV IRT GH
Sbjct: 725 IDIETGKEIRTLSEWNRGCVYSVSFSNDGKTLATGSADKTIKLWNVETGEEIRTLSGHNG 784
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
N V S G L GS + +++V G+ E T +G G V SV +R
Sbjct: 785 KVNSVSFS--SDGKTLATGSADKTIKLWNVETGK-------EIRTLSG-HNGEVHSVSFR 834
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
G+ TL +G SD + ++
Sbjct: 835 SDGK---TLASGSSDNTIKLW 852
Score = 70.9 bits (172), Expect = 1e-09, Method: Composition-based stats.
Identities = 71/220 (32%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 135 FERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCC 194
+ R E RV SV +S+ L A+GSDDGT+++WD + G+ + T+ S V
Sbjct: 563 YNRLEGHNSRVNSVSFSRDGKTL-ATGSDDGTIKLWD--VETGQEIRTL--SGHNGKVNS 617
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT 252
V F P G +L A G DK ++V + + + DG+ +V++ R D TL T
Sbjct: 618 VSFSPDGKTL-ATGSEDKTIKLWNVETGEEIGTLSGHDGYVFSVSFSR--DGKTLATGSD 674
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE--TNQVFVYDVRWGEP 310
DG +KLW+V + IRT GH N V S G L S+ T +++ D+ G+
Sbjct: 675 DGTIKLWDVETGQEIRTLSGHNGKVNSVSFS--SDGKTLAFDSDGGTIKLWYIDIETGK- 731
Query: 311 VWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
E T + RG V SV + G+ TL G +D
Sbjct: 732 ------EIRTLSEWNRGCVYSVSFSNDGK---TLATGSAD 762
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+GH V + F D TL T DG +KLW+V + IRT GH N V S
Sbjct: 566 LEGHNSRVNSVSFSRDGKTLATGSDDGTIKLWDVETGQEIRTLSGHNGKVNSVSFS--PD 623
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G L GSE + +++V GE E T +G + G+V SV + R G+ TL G
Sbjct: 624 GKTLATGSEDKTIKLWNVETGE-------EIGTLSGHD-GYVFSVSFSRDGK---TLATG 672
Query: 348 GSDGLLHVF 356
DG + ++
Sbjct: 673 SDDGTIKLW 681
>gi|218441689|ref|YP_002380018.1| hypothetical protein PCC7424_4792 [Cyanothece sp. PCC 7424]
gi|218174417|gb|ACK73150.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
Length = 1363
Score = 79.3 bits (194), Expect = 3e-12, Method: Composition-based stats.
Identities = 83/306 (27%), Positives = 131/306 (42%), Gaps = 38/306 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G + I+++N+++ P+ + H+ + SL +
Sbjct: 877 VSFSPDGKTLASGSSDKTIKLWNVQT---GQPIRTLRGHN----------GYVYSLSFS- 922
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG D + +++ K+ I + H G V+SV YS L ASGSDD T+
Sbjct: 923 -LDGKRLASGSADKTIKIWNVSKETEILTFNGHRGY-VYSVSYSPDGKTL-ASGSDDKTI 979
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD P+ RS V + P G +L A+ DK +DV + +
Sbjct: 980 KLWDVITGTEMLTLYGHPNYVRS----VSYSPDGKTL-ASSSEDKTIKLWDVSTQTE-IR 1033
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+F GH V I D TL + D +KLW+V+ IRT KGH + V S
Sbjct: 1034 IFRGHSGYVYSISLSNDGKTLASGSGDKTIKLWDVSTGIEIRTLKGHDDYVRSVTFS--P 1091
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVA 346
G L S + ++DV G + + G+V SV + G+ ++A
Sbjct: 1092 DGKTLASSSNDLTIKLWDVSTG--------KEIRTLKEHHGWVRSVSFSPDGK----MIA 1139
Query: 347 GGSDGL 352
GSD L
Sbjct: 1140 SGSDDL 1145
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 69/248 (27%), Positives = 107/248 (43%), Gaps = 24/248 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L S D + +D+ I EH G V SV +S D + ASGSDD T+++W
Sbjct: 1093 GKTLASSSNDLTIKLWDVSTGKEIRTLKEHHGW-VRSVSFSP-DGKMIASGSDDLTIKLW 1150
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + GK + T+ + V V F P G ++A+ D +DV K + +
Sbjct: 1151 DVKT--GKEIRTL--NGHHDYVRSVSFSPDGK-MIASSSDDLTIKLWDV-KTGKEIRTLN 1204
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW-RHG 288
GH V +RF D TL + D +KLW+V + I T GH +V W + G
Sbjct: 1205 GHHDYVRNVRFSPDGKTLASGSNDLTIKLWDVKTGKEIYTLNGH---DGYVRRVSWSKDG 1261
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
L GS + ++D+ T + +G+ SV D TL++G
Sbjct: 1262 KRLASGSADKTIKIWDL-----------STKTELFTLKGYDESVRSVTFSPDGKTLISGS 1310
Query: 349 SDGLLHVF 356
D + ++
Sbjct: 1311 DDSTIKLW 1318
Score = 57.8 bits (138), Expect = 9e-06, Method: Composition-based stats.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 22/243 (9%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+++ SG D + ++++ I H + V S+ +S ++ AS S D ++
Sbjct: 755 SDGKMIASGSDDKTIKLWNVQTGQQIRTLRGHD-QSVLSLSFSPNGKMI-ASASRDKIIK 812
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+W+ + G+ + T++ V V F P G ++A+ DK ++V+ +
Sbjct: 813 LWNVQT--GQPIRTLR--GHDGYVYSVSFSPDGK-MIASSSRDKTIKLWNVQTG-QQIRA 866
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH V + F D TL + +D +KLWNV + IRT +GH N LS
Sbjct: 867 LRGHDGYVYSVSFSPDGKTLASGSSDKTIKLWNVQTGQPIRTLRGH--NGYVYSLSFSLD 924
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G L GS + +++V + E +T G RG+V SV + G+ TL +G
Sbjct: 925 GKRLASGSADKTIKIWNVS-------KETEILTFNG-HRGYVYSVSYSPDGK---TLASG 973
Query: 348 GSD 350
D
Sbjct: 974 SDD 976
Score = 47.4 bits (111), Expect = 0.011, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTDG-CLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+GH VT + F ++ +G+D +KLWNV + IRT +GH +++ + LS +
Sbjct: 741 LEGHNNYVTKVSFSSDGKMIASGSDDKTIKLWNVQTGQQIRTLRGH--DQSVLSLSFSPN 798
Query: 288 GGLLGCGSETNQVFVYDVRWGEPV 311
G ++ S + +++V+ G+P+
Sbjct: 799 GKMIASASRDKIIKLWNVQTGQPI 822
>gi|218189167|gb|EEC71594.1| hypothetical protein OsI_03978 [Oryza sativa Indica Group]
Length = 843
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 43/289 (14%)
Query: 89 VCDYYI--CTPAKLSSLKWKPG------------------TSGRVLGSGDYDGVVMEYDL 128
V DY++ C +SL WKP S RV +G D V + +
Sbjct: 15 VTDYFLEACIAQVYNSLTWKPKLEEFVAHDAEVRSLSIGKKSSRVFITGGSDRKVNLWAI 74
Query: 129 EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
K+ P+ H G V +V++ + VL +GS +G++++WD + K V ++ +
Sbjct: 75 GKQTPLLSLSGHTGS-VEAVEFDTAE-VLVLAGSSNGSIKLWD--LEEAKVVRSL--TGH 128
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTL 247
RS+ VEFHPFG A+G +D +D++K + + GHR + IRF D +
Sbjct: 129 RSSCTSVEFHPFGE-FFASGSSDTDLKIWDIKKK-GCIHTYKGHRGAIRTIRFTPDGRWV 186
Query: 248 VTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
VT G D +K+W++ +++ +K H + LL GS V +D
Sbjct: 187 VTGGEDNIVKVWDLTAGKLLHDFKFHSGQIRCIDFHPQEF--LLATGSADRTVKFWD--- 241
Query: 308 GEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ FE + +AG E V S + G+ TL G D L VF
Sbjct: 242 -----LETFELIGSAGPEATGVRSTVFHPDGK---TLFC-GLDQSLKVF 281
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSLKWK 106
+EF P FA+G ++I++IK K C + Y + ++++
Sbjct: 135 VEFHPFGEFFASGSSDTDLKIWDIK--------------KKGCIHTYKGHRGAIRTIRFT 180
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + +G D +V +DL + + H G ++ +D+ + +L A+GS D T
Sbjct: 181 P--DGRWVVTGGEDNIVKVWDLTAGKLLHDFKFHSG-QIRCIDFHPQEFLL-ATGSADRT 236
Query: 167 MQMWDPRCDGGKCVSTVQPSAS--RSAVCCVEFHPFGSSL 204
++ WD + + + + P A+ RS V FHP G +L
Sbjct: 237 VKFWD--LETFELIGSAGPEATGVRSTV----FHPDGKTL 270
>gi|413924381|gb|AFW64313.1| hypothetical protein ZEAMMB73_321715 [Zea mays]
Length = 489
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 72/120 (60%), Gaps = 8/120 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++++I+++ +V+ + V H V + + T +KLS L
Sbjct: 354 VSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPSDV----HCPVVE--MATRSKLSCLS 407
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W S ++ S DY+G+V +D++ + + E +EH +R WSVD+S+ +P + SGSDD
Sbjct: 408 WN-KYSKNIIASSDYEGIVTVWDVQTRQSVMEYEEH-EKRAWSVDFSRTEPSMLVSGSDD 465
>gi|254416128|ref|ZP_05029883.1| hypothetical protein MC7420_7550 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196177061|gb|EDX72070.1| hypothetical protein MC7420_7550 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 706
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 25/253 (9%)
Query: 62 IARKIRIYNI--KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDY 119
A K+R+ N+ ++V P ++ +H + +P G++L SG
Sbjct: 68 FATKVRVANVLWQAVNKLKPYNSLEEHDSSVNSVSFSP------------DGKILASGSE 115
Query: 120 DGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKC 179
D + ++LE I DEH V SV +S L ASGS+D T+++W+ + G+
Sbjct: 116 DKTIKLWNLETGEAIATLDEHD-SSVISVSFSPDGKTL-ASGSEDKTIKLWN--LETGEA 171
Query: 180 VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI 239
++T+ S V V F P G +L A+G DK +++ + + + D H +V +
Sbjct: 172 IATLDEH--DSWVNSVSFSPDGKTL-ASGSEDKTIKLWNL-ETGEAIATLDEHDSSVISV 227
Query: 240 RFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETN 298
F D TL + D +KLWN+ + I T GH + + +S G L GS N
Sbjct: 228 SFSPDGKTLASGSGDNTIKLWNLETGKAISTLTGH--DSGVISVSFSPDGKTLASGSGDN 285
Query: 299 QVFVYDVRWGEPV 311
+ ++++ GE +
Sbjct: 286 TIKLWNLETGEVI 298
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 32/272 (11%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P + A+G + I+++N+++ +A +D + + S+
Sbjct: 97 SVNSVSFSPDGKILASGSEDKTIKLWNLET----GEAIATLDEHD---------SSVISV 143
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P G+ L SG D + ++LE I DEH V SV +S L ASGS+
Sbjct: 144 SFSP--DGKTLASGSEDKTIKLWNLETGEAIATLDEH-DSWVNSVSFSPDGKTL-ASGSE 199
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++W+ + G+ ++T+ S+V V F P G +L A+G D +++ +
Sbjct: 200 DKTIKLWN--LETGEAIATLDE--HDSSVISVSFSPDGKTL-ASGSGDNTIKLWNL-ETG 253
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRT---YKGHVNNRNF 279
+ GH V + F D TL + D +KLWN+ VI T Y VN+ +F
Sbjct: 254 KAISTLTGHDSGVISVSFSPDGKTLASGSGDNTIKLWNLETGEVIATLTRYNLWVNSVSF 313
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
G L GS+ N + ++++ GE +
Sbjct: 314 S-----PDGKTLAFGSDDNTIKLWNLETGEVI 340
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 26/269 (9%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P + A+G I+++N +D + + ++ +S
Sbjct: 391 SVNSVSFSPDGKILASGSGDNTIKLWN-------RETGETIDTLTIYNLWV------NSA 437
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P G+ L SG+ D + ++LE I H V SV +S +L ASGS
Sbjct: 438 SFSP--DGKTLASGNEDKTIKLWNLETGEAIATITGH-DSGVISVSFSPDGKIL-ASGSG 493
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++W+ + GK + T+ S+V V F P G +L A+G D +++ K
Sbjct: 494 DNTIKLWN--LETGKNIDTLY--GHDSSVNSVSFSPDGKTL-ASGSDDYTIKLWNI-KTG 547
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ + GH +V + F D L + D +KLWN+ I + GH ++ N V
Sbjct: 548 ENIDTLYGHDSSVNSVSFSPDGKILASGSGDNTIKLWNIETGEAIDSLTGHYSSVNSVSF 607
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L GSE N + +++++ G+ +
Sbjct: 608 S--PDGKTLASGSEDNTIKLWNIKTGKNI 634
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 26/252 (10%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P A+G + I+++N+++ + + H + + S+ + P
Sbjct: 439 FSPDGKTLASGNEDKTIKLWNLET---GEAIATITGH----------DSGVISVSFSP-- 483
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G++L SG D + ++LE I H V SV +S L ASGSDD T+++
Sbjct: 484 DGKILASGSGDNTIKLWNLETGKNIDTLYGHD-SSVNSVSFSPDGKTL-ASGSDDYTIKL 541
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W+ + G+ + T+ S+V V F P G ++A+G D +++ + + +
Sbjct: 542 WNIKT--GENIDTLY--GHDSSVNSVSFSPDGK-ILASGSGDNTIKLWNI-ETGEAIDSL 595
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH +V + F D TL + D +KLWN+ + I T GH ++ N V S G
Sbjct: 596 TGHYSSVNSVSFSPDGKTLASGSEDNTIKLWNIKTGKNIDTLYGHYSSVNSVSFS--PDG 653
Query: 289 GLLGCGSETNQV 300
L GS+ N++
Sbjct: 654 KTLASGSDDNKI 665
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 144/367 (39%), Gaps = 81/367 (22%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P A+G + I+++N+++ +A +D D ++ +S+
Sbjct: 139 SVISVSFSPDGKTLASGSEDKTIKLWNLET----GEAIATLDE---HDSWV------NSV 185
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P G+ L SG D + ++LE I DEH V SV +S L ASGS
Sbjct: 186 SFSP--DGKTLASGSEDKTIKLWNLETGEAIATLDEHD-SSVISVSFSPDGKTL-ASGSG 241
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRK 221
D T+++W+ + GK +ST+ + S V V F P G +L A+G D K + + +
Sbjct: 242 DNTIKLWN--LETGKAISTL--TGHDSGVISVSFSPDGKTL-ASGSGDNTIKLWNLETGE 296
Query: 222 MVDPVLVFD---------------------------------------GHRKTVTYIRFL 242
++ + ++ GH V + F
Sbjct: 297 VIATLTRYNLWVNSVSFSPDGKTLAFGSDDNTIKLWNLETGEVIATLIGHNSGVISVNFS 356
Query: 243 -DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVF 301
D L + D +KLWN I T GH + N V S G +L GS N +
Sbjct: 357 PDGKILASGSGDNTIKLWNRETGEAIATLTGHYFSVNSVSFS--PDGKILASGSGDNTIK 414
Query: 302 VYDVRWGEPV--------WVH--DFEP---VTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
+++ GE + WV+ F P A+G+E + W + + G
Sbjct: 415 LWNRETGETIDTLTIYNLWVNSASFSPDGKTLASGNEDKTIK--LWNLETGEAIATITGH 472
Query: 349 SDGLLHV 355
G++ V
Sbjct: 473 DSGVISV 479
>gi|428317752|ref|YP_007115634.1| WD-40 repeat-containing protein [Oscillatoria nigro-viridis PCC
7112]
gi|428241432|gb|AFZ07218.1| WD-40 repeat-containing protein [Oscillatoria nigro-viridis PCC
7112]
Length = 1074
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 115/271 (42%), Gaps = 18/271 (6%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + + F P A+ I++++++S P+ + HS +P S
Sbjct: 702 SNQVLSVAFSPHGKTLASASFDNTIKLWHLES---QKPITTLTGHSNSVLSVAFSPVGAS 758
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
P G+ L S +D + + L + + H + V+SV +S L AS
Sbjct: 759 ----LPSRIGKTLASASFDNTIKLWRLHSQTELITLTGHSNQ-VYSVAFSPDGKTL-ASA 812
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W + K ++T+ + ++V V F P G +L A+G +D + +
Sbjct: 813 SGDNTIKLW--HLESQKPIATL--TGHSNSVLSVAFSPDGQTL-ASGSSDNTIQLWHLES 867
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ V GH V I F D TL +A D +KLWNV + I T GH N V
Sbjct: 868 QTE-VTTLTGHSNPVYSIAFSPDGKTLASASFDNTIKLWNVETQKPIATLTGHSNWVLSV 926
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L S N + ++ + +P+
Sbjct: 927 AFS--PDGKTLASASFDNTIKLWHLESQKPI 955
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 32/273 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S S+ I F P A+ I+++N+++ P + HS ++
Sbjct: 618 SYSVDSIAFSPDGQTLASASSDNTIKLWNVET---QKPSATLTGHSN----------QVR 664
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L S D + +++E + PI H + V SV +S L AS
Sbjct: 665 SVAFSPD--GKTLASASSDNTIKLWNVETQKPIATLTGHSNQ-VLSVAFSPHGKTL-ASA 720
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL-------VAAGCADKKA 214
S D T+++W + K ++T+ + ++V V F P G+SL +A+ D
Sbjct: 721 SFDNTIKLW--HLESQKPITTL--TGHSNSVLSVAFSPVGASLPSRIGKTLASASFDNTI 776
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ + + ++ GH V + F D TL +A D +KLW++ + I T GH
Sbjct: 777 KLWRLHSQTE-LITLTGHSNQVYSVAFSPDGKTLASASGDNTIKLWHLESQKPIATLTGH 835
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
N+ V S G L GS N + ++ +
Sbjct: 836 SNSVLSVAFS--PDGQTLASGSSDNTIQLWHLE 866
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L S +D + +++E + P H V SV +S L AS S D T+++W
Sbjct: 546 GKTLASASFDNTIKLWNVETQKPSATLTGHRNS-VRSVAFSPDGKTL-ASASSDKTIKLW 603
Query: 171 DPRCDGGKCVSTVQPSASRS----AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+ V T +P A+ + +V + F P G +L A+ +D ++V P
Sbjct: 604 N--------VETQKPIATFTWHSYSVDSIAFSPDGQTL-ASASSDNTIKLWNVETQ-KPS 653
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
GH V + F D TL +A +D +KLWNV + I T GH N V S
Sbjct: 654 ATLTGHSNQVRSVAFSPDGKTLASASSDNTIKLWNVETQKPIATLTGHSNQVLSVAFS-- 711
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPV 311
HG L S N + ++ + +P+
Sbjct: 712 PHGKTLASASFDNTIKLWHLESQKPI 737
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 32/247 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+S+ + F P A+ I+++N+++ P + H +P
Sbjct: 534 SNSVRSVAFSPDGKTLASASFDNTIKLWNVET---QKPSATLTGHRNSVRSVAFSP---- 586
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G+ L S D + +++E + PI H V S+ +S L AS
Sbjct: 587 --------DGKTLASASSDKTIKLWNVETQKPIATFTWH-SYSVDSIAFSPDGQTL-ASA 636
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSAS----RSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S D T+++W+ V T +PSA+ + V V F P G +L A+ +D +
Sbjct: 637 SSDNTIKLWN--------VETQKPSATLTGHSNQVRSVAFSPDGKTL-ASASSDNTIKLW 687
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+V P+ GH V + F TL +A D +KLW++ + I T GH N+
Sbjct: 688 NVETQ-KPIATLTGHSNQVLSVAFSPHGKTLASASFDNTIKLWHLESQKPITTLTGHSNS 746
Query: 277 RNFVGLS 283
V S
Sbjct: 747 VLSVAFS 753
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 13/203 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L S D + + LE + PI H V SV +S L ASGS D T+Q+W
Sbjct: 806 GKTLASASGDNTIKLWHLESQKPIATLTGHSNS-VLSVAFSPDGQTL-ASGSSDNTIQLW 863
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVF 229
+ V+T+ + + V + F P G +L +A + K + + +K P+
Sbjct: 864 --HLESQTEVTTL--TGHSNPVYSIAFSPDGKTLASASFDNTIKLWNVETQK---PIATL 916
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V + F D TL +A D +KLW++ + I T GH N V S G
Sbjct: 917 TGHSNWVLSVAFSPDGKTLASASFDNTIKLWHLESQKPIATLTGHSNPVLSVAFS--PEG 974
Query: 289 GLLGCGSETNQVFVYDVRWGEPV 311
L S N + ++ + +P+
Sbjct: 975 KTLASASRDNTIKLWHLESQKPI 997
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 113/272 (41%), Gaps = 38/272 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + + F P A+ I++++++S P+ + HS +P
Sbjct: 794 SNQVYSVAFSPDGKTLASASGDNTIKLWHLES---QKPIATLTGHSNSVLSVAFSP---- 846
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G+ L SG D + + LE + + H V+S+ +S L AS
Sbjct: 847 --------DGQTLASGSSDNTIQLWHLESQTEVTTLTGHSNP-VYSIAFSPDGKTL-ASA 896
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCADK-KAYA 216
S D T+++W+ V T +P A+ + V V F P G +L +A + K +
Sbjct: 897 SFDNTIKLWN--------VETQKPIATLTGHSNWVLSVAFSPDGKTLASASFDNTIKLWH 948
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ +K P+ GH V + F + TL +A D +KLW++ + I T H N
Sbjct: 949 LESQK---PIATLTGHSNPVLSVAFSPEGKTLASASRDNTIKLWHLESQKPIATLTEHSN 1005
Query: 276 NRNFVGLSVWRHGGLLGCGS--ETNQVFVYDV 305
V S G L S +T +++++DV
Sbjct: 1006 EVWSVAFS--PDGKTLASASRDKTIKLWIWDV 1035
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+GH +V + F D TL +A D +KLWNV + T GH N+ V S
Sbjct: 530 LEGHSNSVRSVAFSPDGKTLASASFDNTIKLWNVETQKPSATLTGHRNSVRSVAFS--PD 587
Query: 288 GGLLGCGSETNQVFVYDVRWGEPV 311
G L S + +++V +P+
Sbjct: 588 GKTLASASSDKTIKLWNVETQKPI 611
>gi|220910634|ref|YP_002485944.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 7425]
gi|219867406|gb|ACL47743.1| WD-40 repeat protein [Cyanothece sp. PCC 7425]
Length = 1213
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 69/248 (27%), Positives = 117/248 (47%), Gaps = 32/248 (12%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
R+L SG DG+V +++ ++ + H + VWSV +SK D AS +DGT+++WD
Sbjct: 636 RLLVSGSIDGMVKLWEVRTGQCLYTLNAHA-KIVWSVVFSK-DGKWFASSCEDGTIKIWD 693
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
C G+C+ T++ A++S+V + F LV+A C D + +D+ + + + F+G
Sbjct: 694 --CKTGECLQTLR--ANQSSVRSIAFTSDSRYLVSA-CEDHQLRLWDLTQG-ECIRTFEG 747
Query: 232 HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR---- 286
H TV + D +++ G D +KLW++ R ++ Y+GH L +W
Sbjct: 748 HSHTVWTVDISPDDQYVISGGNDYVVKLWDLQSGRCLQDYEGHT-------LQIWSVAFS 800
Query: 287 -HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
G + GS V ++++ E RG S V D TL
Sbjct: 801 PDGQTIASGSMDQTVRLWNI-----------EERQCKACFRGHSSMVMAVAFSADGKTLA 849
Query: 346 AGGSDGLL 353
+GG D L+
Sbjct: 850 SGGMDRLI 857
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 107/251 (42%), Gaps = 28/251 (11%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F+ S+ A+GG + ++I+N++ H +V A + S+ + P
Sbjct: 983 FNHDGSLIASGGDDKNVQIFNLR-------------HQRVEKLLQGHKAVVWSVAFSP-- 1027
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+GR+L SG +D V +D+ + H + ++ + P + A+ S D +++
Sbjct: 1028 NGRLLASGSFDQTVRIWDVRSWQCLHILSGHTNA-LTTIVFHPSLPCI-ATASSDAMVKL 1085
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + G+C T+ S + V + F P G + G DK +DV +F
Sbjct: 1086 WS--LETGQCYHTL--SDHHNVVMGIAFSPDGQTFTT-GSYDKTVRVWDVESW-QCQTIF 1139
Query: 230 DGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYK-----GHVNNRNFVGLSV 284
+ + + TLV+ G +G L+LW++ + I+ K +N R GL+
Sbjct: 1140 QANSLVHSVAFSPNGQTLVSGGDNGTLQLWDLKTRQCIKVIKLPELYAGMNIRGVKGLAE 1199
Query: 285 WRHGGLLGCGS 295
+ LL G+
Sbjct: 1200 AQESMLLNLGA 1210
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 13/170 (7%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
+ R L S D + +DL + + FE H VW+VD S D + SG +D
Sbjct: 717 SDSRYLVSACEDHQLRLWDLTQGECIRTFEGHSH---TVWTVDISPDDQYV-ISGGNDYV 772
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD G+C+ + + + V F P G + +A+G D+ +++ +
Sbjct: 773 VKLWD--LQSGRCLQDYEGHTLQ--IWSVAFSPDGQT-IASGSMDQTVRLWNIEER-QCK 826
Query: 227 LVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
F GH V + F D TL + G D +K W+++ +T+ G N
Sbjct: 827 ACFRGHSSMVMAVAFSADGKTLASGGMDRLIKHWDLSSKACAKTWSGFKN 876
Score = 45.8 bits (107), Expect = 0.034, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SG D VV +DL+ + + + H ++WSV +S + ASGS D T+++W+ +
Sbjct: 766 SGGNDYVVKLWDLQSGRCLQDYEGHT-LQIWSVAFSPDGQTI-ASGSMDQTVRLWN--IE 821
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
+C + + S V V F G +L A+G D+ +D+ + G +
Sbjct: 822 ERQCKACFR--GHSSMVMAVAFSADGKTL-ASGGMDRLIKHWDLSSKA-CAKTWSGFKNI 877
Query: 236 VTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+ + F + +T+ ++ DG L++W V++S+ I+T K
Sbjct: 878 IWSVAFSPEGETIASSSLDGILRIWQVDNSQCIQTMK 914
>gi|425436354|ref|ZP_18816790.1| WD40 repeat, subgroup [Microcystis aeruginosa PCC 9432]
gi|389678884|emb|CCH92246.1| WD40 repeat, subgroup [Microcystis aeruginosa PCC 9432]
Length = 1247
Score = 78.2 bits (191), Expect = 6e-12, Method: Composition-based stats.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++ +S V+ ++ DY++ L
Sbjct: 919 TDWICSVAFSPDGKTLISGSGDQTIRLWSGES----GEVIKILQEK---DYWVL----LY 967
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ P +G+++ S +D + +D++ EH +RVW++ +S +L SG
Sbjct: 968 QIAVSP--NGQLIASTSHDNTIKLWDIKTDEKYTFSPEHQ-KRVWAIAFSPNSQIL-VSG 1023
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F P G L+A G D+ + +
Sbjct: 1024 SGDNSVKLWSVPR---GFCLKTFE--EHQAWVLSVAFSPDGR-LIATGSEDRTIKLWSIE 1077
Query: 221 K-MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +KLW V D R+I +++GH +
Sbjct: 1078 DDMTQSLRTFTGHQGRIWSVVFSSDSQLLASSSDDQTVKLWQVKDGRLINSFEGHKSWVW 1137
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV G+
Sbjct: 1138 SVAFS--PDGKLLASGGDDATIRIWDVETGQ 1166
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A T+++ WD ++T + SP + I F P+ + +G ++++++
Sbjct: 979 ASTSHDNTIKLWD--IKTDEKYTFSPEH--QKRVWAIAFSPNSQILVSGSGDNSVKLWSV 1034
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
+ +H A + S+ + P GR++ +G D + + +E
Sbjct: 1035 PRGFC---LKTFEEHQ----------AWVLSVAFSP--DGRLIATGSEDRTIKLWSIEDD 1079
Query: 132 VPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS 190
+ R G + R+WSV +S D L AS SDD T+++W + G+ +++ + +S
Sbjct: 1080 MTQSLRTFTGHQGRIWSVVFSS-DSQLLASSSDDQTVKLW--QVKDGRLINSFE--GHKS 1134
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRK-MVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
V V F P G L+A+G D +DV + +L GH K+V + F + TL
Sbjct: 1135 WVWSVAFSPDGK-LLASGGDDATIRIWDVETGQLHQLLC--GHTKSVRSVCFSPNGKTLA 1191
Query: 249 TAGTDGCLKLWNVNDSRVIRTYK 271
+A D +KLWN+ + T +
Sbjct: 1192 SASEDETIKLWNLKTEKCQNTLR 1214
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 628 LLATGDSHGMIYLWKVKQDGKLELNKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIVKIW 686
Query: 171 DPRCDGG-KCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
D C S PS A + V F S +A G DK + V + + +
Sbjct: 687 SIITDISINCHSCPDPSQKHHAPIRSVTFSA-DSKFLATGSEDKTIKIWSV-ETGECLHT 744
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+GH++ V + F L+ +G+ D +K+W+V+ + + T GH + V S
Sbjct: 745 LEGHQERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQDWVWQVAFS--SD 802
Query: 288 GGLLGCGSETNQVFVYDVRWGEP------------VWVHDFEP---VTAAGSE 325
G LL GS + ++ + G+ +W F P A+GSE
Sbjct: 803 GQLLASGSGDKTIKIWSIIEGKYQNIATLEGHENWIWSIAFSPDGQYIASGSE 855
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+ L +G D + + +E + + H RV V +S +L ASGS D T+++W
Sbjct: 720 KFLATGSEDKTIKIWSVETGECLHTLEGHQ-ERVGGVTFSPNGQLL-ASGSADKTIKIWS 777
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV-RKMVDPVLVFD 230
D GKC+ T+ + + V V F G L+A+G DK + + + +
Sbjct: 778 --VDTGKCLHTL--TGHQDWVWQVAFSSDGQ-LLASGSGDKTIKIWSIIEGKYQNIATLE 832
Query: 231 GHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
GH + I F + +G+ D L+LW+V + ++ ++G+ N + + S
Sbjct: 833 GHENWIWSIAFSPDGQYIASGSEDFTLRLWSVKTRKYLQCFRGYGNRLSSITFS 886
Score = 47.0 bits (110), Expect = 0.016, Method: Composition-based stats.
Identities = 59/290 (20%), Positives = 117/290 (40%), Gaps = 38/290 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ +G + F P+ + A+G + I+I+++ + H + D
Sbjct: 750 ERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQD----------------- 792
Query: 103 LKWKPGTS--GRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W+ S G++L SG D + + +E K E +WS+ +S D A
Sbjct: 793 WVWQVAFSSDGQLLASGSGDKTIKIWSIIEGKYQNIATLEGHENWIWSIAFSP-DGQYIA 851
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+D T+++W + K + + +R + + F P S + +G D+ + +
Sbjct: 852 SGSEDFTLRLWSVKTR--KYLQCFRGYGNR--LSSITFSP-DSQYILSGSIDRSIRLWSI 906
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + +GH + + F D TL++ D ++LW+ VI+ +
Sbjct: 907 KNH-KCLQQINGHTDWICSVAFSPDGKTLISGSGDQTIRLWSGESGEVIKILQEKDYWVL 965
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
++V +G L+ S N + ++D++ E VW F P
Sbjct: 966 LYQIAVSPNGQLIASTSHDNTIKLWDIKTDEKYTFSPEHQKRVWAIAFSP 1015
>gi|186682464|ref|YP_001865660.1| hypothetical protein Npun_R2098 [Nostoc punctiforme PCC 73102]
gi|186464916|gb|ACC80717.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
Length = 1175
Score = 78.2 bits (191), Expect = 6e-12, Method: Composition-based stats.
Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 57/328 (17%)
Query: 23 WDFNLRTT-VSSSSSPNAAVS-----DSIG---VIEFDPSDSVFATGGIARKIRIYNI-- 71
W +LR + ++S NA ++ ++IG + F P + ATG ++R+Y +
Sbjct: 530 WQADLRNVNLQNASFVNANLAKCVFAETIGGIHAVAFSPDGKLLATGDTNGEVRLYQVAD 589
Query: 72 -KSVLV----------------DHPVVAVVDHSKVCDYYICTPAKLSSLK------WKPG 108
K + + H + + D V + T L++ + W
Sbjct: 590 GKQLFICKGHTGFIWPVTFSPDGHLLASGSDDQTVKLWDTSTGQCLATFQGHSAGIWSVS 649
Query: 109 TS--GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
S G+ L S D V +D I H R VWSV +S +L ASG+DD +
Sbjct: 650 FSSDGQTLASSSEDTTVKLWDTSTGQCIQTLQGHSSR-VWSVAFSPDGTIL-ASGNDDSS 707
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD +C+ T+ R V V F P G L++ GC D+ +D+ + +
Sbjct: 708 IRLWD--ISTSQCIKTLVGHTHR--VQSVAFSPDGDKLIS-GCHDRTVRLWDI-NTSECL 761
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
F H V + F D D L + D +KLW+VN ++T KGH G VW
Sbjct: 762 YTFQSHTDLVNSVAFSSDGDRLASGSDDQTVKLWDVNTGLCLKTLKGH-------GSRVW 814
Query: 286 R-----HGGLLGCGSETNQVFVYDVRWG 308
G +L GS+ V ++DV G
Sbjct: 815 SVAFSPDGKMLASGSDDQTVRLWDVNTG 842
Score = 75.1 bits (183), Expect = 5e-11, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 30/232 (12%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G +L SG D V ++ + H R + SV +S +L A+GSDD ++++W
Sbjct: 906 GNLLASGSEDQTVKLWNANTGQCLKTLGGHSNR-IISVAFSPDGKIL-ATGSDDQSIKLW 963
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + GKC+ T+Q R + V F P G +L A+GC D+ +DV + + V +
Sbjct: 964 D--VNTGKCLKTLQGHTQR--IWSVAFSPDGQTL-ASGCHDQTVRLWDV-CIGSCIQVLE 1017
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH + + F D TL ++ D +KLW+++ + +RT +GH N +S+ G
Sbjct: 1018 GHTDWIWSVVFSPDGMTLASSSGDQTVKLWDISTGKCLRTLQGHTNCVYSSAISI--DGC 1075
Query: 290 LLGCGSETNQVFVYDV-------------RWGEPVWVHDFEP---VTAAGSE 325
+L GS + ++D+ +W VW F P + A+GSE
Sbjct: 1076 ILASGSGDQTIKLWDLSTNKEIKTLSGHNKW---VWSVAFNPQGKILASGSE 1124
Score = 74.3 bits (181), Expect = 8e-11, Method: Composition-based stats.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 38/296 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-----VLVDHP-VVAVVDHSKVCDYYIC 95
S + + F P ++ A+G IR+++I + LV H V V S D I
Sbjct: 684 SSRVWSVAFSPDGTILASGNDDSSIRLWDISTSQCIKTLVGHTHRVQSVAFSPDGDKLIS 743
Query: 96 TPAKLSSLKWKPGTS---------------------GRVLGSGDYDGVVMEYDLEKKVPI 134
+ W TS G L SG D V +D+ + +
Sbjct: 744 GCHDRTVRLWDINTSECLYTFQSHTDLVNSVAFSSDGDRLASGSDDQTVKLWDVNTGLCL 803
Query: 135 FERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCC 194
HG R VWSV +S +L ASGSDD T+++WD + G C+ T+Q + +
Sbjct: 804 KTLKGHGSR-VWSVAFSPDGKML-ASGSDDQTVRLWD--VNTGGCLKTLQGYCN--GIWS 857
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-D 253
V F G ++A+G D+ +D + + GH VT + L+ +G+ D
Sbjct: 858 VTFSSNGQ-ILASGNNDQTVKLWDTSTGL-CLKTLRGHSNRVTSVSLSQDGNLLASGSED 915
Query: 254 GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+KLWN N + ++T GH N + ++ G +L GS+ + ++DV G+
Sbjct: 916 QTVKLWNANTGQCLKTLGGHSN--RIISVAFSPDGKILATGSDDQSIKLWDVNTGK 969
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 114/269 (42%), Gaps = 62/269 (23%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L +GD +G V Y + +F H G +W V +S D L ASGSDD T+++W
Sbjct: 570 GKLLATGDTNGEVRLYQVADGKQLFICKGHTGF-IWPVTFSP-DGHLLASGSDDQTVKLW 627
Query: 171 DP---RC------------------DG-------------------GKCVSTVQPSASRS 190
D +C DG G+C+ T+Q +SR
Sbjct: 628 DTSTGQCLATFQGHSAGIWSVSFSSDGQTLASSSEDTTVKLWDTSTGQCIQTLQGHSSR- 686
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVT 249
V V F P G +++A+G D +D+ + GH V + F D D L++
Sbjct: 687 -VWSVAFSPDG-TILASGNDDSSIRLWDI-STSQCIKTLVGHTHRVQSVAFSPDGDKLIS 743
Query: 250 AGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR--- 306
D ++LW++N S + T++ H + N V S G L GS+ V ++DV
Sbjct: 744 GCHDRTVRLWDINTSECLYTFQSHTDLVNSVAFS--SDGDRLASGSDDQTVKLWDVNTGL 801
Query: 307 -------WGEPVWVHDFEP---VTAAGSE 325
G VW F P + A+GS+
Sbjct: 802 CLKTLKGHGSRVWSVAFSPDGKMLASGSD 830
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 66/268 (24%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ I + F P + ATG + I+++++ + + + H++ ++
Sbjct: 936 SNRIISVAFSPDGKILATGSDDQSIKLWDVNT---GKCLKTLQGHTQ----------RIW 982
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L SG +D V +D+ I + H +WSV +S D + AS
Sbjct: 983 SVAFSP--DGQTLASGCHDQTVRLWDVCIGSCIQVLEGHTD-WIWSVVFSP-DGMTLASS 1038
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD GKC+ T+Q + CV + S++ GC
Sbjct: 1039 SGDQTVKLWD--ISTGKCLRTLQGHTN-----CV----YSSAISIDGC------------ 1075
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
L + D +KLW+++ ++ I+T GH N+
Sbjct: 1076 ------------------------ILASGSGDQTIKLWDLSTNKEIKTLSGH--NKWVWS 1109
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGE 309
++ G +L GSE + ++D+ GE
Sbjct: 1110 VAFNPQGKILASGSEDETIRLWDIETGE 1137
Score = 39.7 bits (91), Expect = 2.6, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G +L SG D + +DL I H + VWSV ++ +L ASGS+D T+++W
Sbjct: 1074 GCILASGSGDQTIKLWDLSTNKEIKTLSGHN-KWVWSVAFNPQGKIL-ASGSEDETIRLW 1131
Query: 171 DPRCDGGKCVSTVQ 184
D + G+C+ T++
Sbjct: 1132 D--IETGECLKTLR 1143
>gi|425453094|ref|ZP_18832908.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 7941]
gi|389764702|emb|CCI09150.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 7941]
Length = 1247
Score = 78.2 bits (191), Expect = 6e-12, Method: Composition-based stats.
Identities = 78/318 (24%), Positives = 141/318 (44%), Gaps = 37/318 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++++S V+ ++ DY++
Sbjct: 919 TDWICSVAFSPDGKTLISGSGDQTIRLWSVES----GKVIKILQEK---DYWVLLHQVAV 971
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S +G+++ S +D ++ +D+ EH RVWS+ +S +L SG
Sbjct: 972 S------ANGQLIASTSHDNIIKLWDIRTDEKYTFAPEHQ-ERVWSIAFSPNSQML-VSG 1023
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F P G L+A G D+ + +
Sbjct: 1024 SGDNSVKLWSVPR---GFCLKTFE--EHQAWVLSVTFSPDGR-LIATGSEDRTIKLWSIE 1077
Query: 221 K-MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +K+W V D R+I +++GH +
Sbjct: 1078 DDMTQSLQTFKGHQGRIWSVVFSPDGQRLASSSDDQTVKVWQVKDGRLINSFEGHKSWVW 1137
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
V S G LL G + + ++DV G+ +H V SVC+ G
Sbjct: 1138 SVAFS--PDGKLLASGGDDATIRIWDVETGQ---LHQL-----LCEHTKSVRSVCFSPNG 1187
Query: 339 EDECTLVAGGSDGLLHVF 356
TL + G D ++ ++
Sbjct: 1188 N---TLASAGEDEMIKLW 1202
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 15/156 (9%)
Query: 111 GRVLGSGDYDGVV----MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
GR++ +G D + +E D+ + + F+ H GR +WSV +S L AS SDD T
Sbjct: 1059 GRLIATGSEDRTIKLWSIEDDMTQSLQTFK--GHQGR-IWSVVFSPDGQRL-ASSSDDQT 1114
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++W + G+ +++ + +S V V F P G L+A+G D +DV
Sbjct: 1115 VKVW--QVKDGRLINSFE--GHKSWVWSVAFSPDGK-LLASGGDDATIRIWDVETGQLHQ 1169
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
L+ + H K+V + F + +TL +AG D +KLWN+
Sbjct: 1170 LLCE-HTKSVRSVCFSPNGNTLASAGEDEMIKLWNL 1204
Score = 51.2 bits (121), Expect = 7e-04, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 23/232 (9%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 628 LLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIVKIW 686
Query: 171 DPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D C S PS A S +A G DK + V + + +
Sbjct: 687 SITTDLSINCHSLPHPSQKHYAPIRAVTFSADSKFLATGSEDKTIKIWSV-ETGECLHTL 745
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH++ V + F L+ +G+ D +K+W+V+ + T GH + V S G
Sbjct: 746 EGHQERVGGVTFSPNGQLLASGSADKTIKIWSVDTGECLHTLTGHQDWVWQVAFS--SDG 803
Query: 289 GLLGCGSETNQVFVYDVRWGEP------------VWVHDFEP---VTAAGSE 325
LL GS + ++ + GE +W F P A+GSE
Sbjct: 804 QLLASGSGDKTIKIWSIIEGEYQNIDTLTGHESWIWSIAFSPDGQYIASGSE 855
Score = 45.1 bits (105), Expect = 0.050, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 109/256 (42%), Gaps = 24/256 (9%)
Query: 23 WDFNLRTTVSSSSSPNAAVSD--SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV 80
W +++ S P+ + I + F ATG + I+I+++++ H +
Sbjct: 686 WSITTDLSINCHSLPHPSQKHYAPIRAVTFSADSKFLATGSEDKTIKIWSVETGECLHTL 745
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
H + ++ + + P +G++L SG D + + ++ + H
Sbjct: 746 EG---HQE----------RVGGVTFSP--NGQLLASGSADKTIKIWSVDTGECLHTLTGH 790
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
VW V +S D L ASGS D T+++W + + T+ + S + + F P
Sbjct: 791 QDW-VWQVAFSS-DGQLLASGSGDKTIKIWSIIEGEYQNIDTL--TGHESWIWSIAFSPD 846
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
G +A+G D + V K + + F G+ ++ I F D +++ D L+LW
Sbjct: 847 GQ-YIASGSEDFTLRLWSV-KTRECLQCFRGYGNRLSSITFSPDSQYILSGSIDRSLRLW 904
Query: 260 NVNDSRVIRTYKGHVN 275
++ + + ++ GH +
Sbjct: 905 SIKNHKCLQQINGHTD 920
Score = 43.9 bits (102), Expect = 0.12, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+ L +G D + + +E + + H RV V +S +L ASGS D T+++W
Sbjct: 720 KFLATGSEDKTIKIWSVETGECLHTLEGHQ-ERVGGVTFSPNGQLL-ASGSADKTIKIWS 777
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV-RKMVDPVLVFD 230
D G+C+ T+ + + V V F G L+A+G DK + + +
Sbjct: 778 --VDTGECLHTL--TGHQDWVWQVAFSSDGQ-LLASGSGDKTIKIWSIIEGEYQNIDTLT 832
Query: 231 GHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
GH + I F + +G+ D L+LW+V ++ ++G+ N + + S
Sbjct: 833 GHESWIWSIAFSPDGQYIASGSEDFTLRLWSVKTRECLQCFRGYGNRLSSITFS 886
>gi|166366485|ref|YP_001658758.1| WD repeat-containing protein [Microcystis aeruginosa NIES-843]
gi|166088858|dbj|BAG03566.1| WD-repeat protein [Microcystis aeruginosa NIES-843]
Length = 1230
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 134/294 (45%), Gaps = 40/294 (13%)
Query: 43 DSIGVIEFDPSD-SVFATGGIARKIRIYNIKSVLV-------DHPVVAV----------- 83
D + +EF+P + +G I+++++K+ D+PV +V
Sbjct: 892 DLVNSVEFNPDEGKTLVSGSDDGTIKLWDVKTGEEIRTLHGHDYPVRSVNFSRDGKTLVS 951
Query: 84 -VDHSKVCDYYICTPAKLSSLKWKPGT--------SGRVLGSGDYDGVVMEYDLE--KKV 132
D + + + T K+ +LK G +G L SG +DG + ++++ K++
Sbjct: 952 GSDDKTIILWDVKTGKKIHTLKGHGGLVRSVNFSPNGETLVSGSWDGTIKLWNVKTGKEI 1011
Query: 133 PIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAV 192
P F + RV SV++S L SGSD+ T+ +W+ + G+ + T + R V
Sbjct: 1012 PTFHGFQGHDGRVRSVNFSPDGKTL-VSGSDNKTITLWN--VETGEEIHTFEGHHDR--V 1066
Query: 193 CCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAG 251
V F P G +LV+ G DK +DV K + + F GH V + F + TLV+
Sbjct: 1067 RSVNFSPNGETLVS-GSYDKTIKLWDVEKRQE-IHTFKGHDGPVRSVNFSPNGKTLVSGS 1124
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
D +KLWNV + IRT GH + V S +G L GS N + ++ V
Sbjct: 1125 DDKTIKLWNVEKRQEIRTLHGHNSRVRSVNFSP--NGKTLVSGSWDNTIKLWKV 1176
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 122/277 (44%), Gaps = 41/277 (14%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D + +++E I HGG V+SV++S+ L SGSDD T+++W
Sbjct: 653 GKTLVSGSDDKTIKLWNVETGQEIRTLKGHGGT-VYSVNFSRDGKTL-VSGSDDKTIKLW 710
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + + + T++ V V F G +LV+ G DK ++V + +
Sbjct: 711 D--VEKPQEIRTLK--VHEGPVYSVNFSRNGKTLVS-GSGDKTIKLWNV-ETGQEIRTLK 764
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D TLV+ D +KLWNV + IRT KGH + V S R G
Sbjct: 765 GHGGPVYSVNFSHDGKTLVSGSGDKTIKLWNVEKPQEIRTLKGHNSRVRSVNFS--RDGK 822
Query: 290 LLGCGSETNQVFVYDVRWGE----------PVWVHDFEP----VTAAGSERGFVS----S 331
L GS N + +++ G+ PVW +F P +GS+ G +
Sbjct: 823 TLVSGSWDNTIKLWNESTGQEILTLKGHEGPVWSVNFSPDEGKTLVSGSDDGTIKLWNVE 882
Query: 332 VCWRRVGEDEC------------TLVAGGSDGLLHVF 356
+ G D+ TLV+G DG + ++
Sbjct: 883 IVQTLKGHDDLVNSVEFNPDEGKTLVSGSDDGTIKLW 919
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 117/260 (45%), Gaps = 34/260 (13%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D + +++EK I H R V SV++S+ L SGS D T+++W
Sbjct: 779 GKTLVSGSGDKTIKLWNVEKPQEIRTLKGHNSR-VRSVNFSRDGKTL-VSGSWDNTIKLW 836
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ G+ + T++ V V F P + +G D ++V + V
Sbjct: 837 NEST--GQEILTLK--GHEGPVWSVNFSPDEGKTLVSGSDDGTIKLWNV----EIVQTLK 888
Query: 231 GHRKTVTYIRFL--DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH---VNNRNFVGLSVW 285
GH V + F + TLV+ DG +KLW+V IRT GH V + NF
Sbjct: 889 GHDDLVNSVEFNPDEGKTLVSGSDDGTIKLWDVKTGEEIRTLHGHDYPVRSVNFS----- 943
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
R G L GS+ + ++DV+ G+ +H + G V SV + GE TLV
Sbjct: 944 RDGKTLVSGSDDKTIILWDVKTGKK--IHTLK------GHGGLVRSVNFSPNGE---TLV 992
Query: 346 AGGSDG---LLHVFVGKKKP 362
+G DG L +V GK+ P
Sbjct: 993 SGSWDGTIKLWNVKTGKEIP 1012
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 137 RDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVE 196
R E G V SV++S+ L SGSDD T+++W+ + G+ + T++ V V
Sbjct: 594 RLEGHGSYVHSVNFSRDGKTL-VSGSDDKTIKLWN--VETGQEIRTLKGHG--GPVYSVN 648
Query: 197 FHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGC 255
F G +LV +G DK ++V + + GH TV + F D TLV+ D
Sbjct: 649 FSRDGKTLV-SGSDDKTIKLWNV-ETGQEIRTLKGHGGTVYSVNFSRDGKTLVSGSDDKT 706
Query: 256 LKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+KLW+V + IRT K H V S R+G L GS + +++V G+ +
Sbjct: 707 IKLWDVEKPQEIRTLKVHEGPVYSVNFS--RNGKTLVSGSGDKTIKLWNVETGQEI 760
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+GH V + F D TLV+ D +KLWNV + IRT KGH V S R
Sbjct: 595 LEGHGSYVHSVNFSRDGKTLVSGSDDKTIKLWNVETGQEIRTLKGHGGPVYSVNFS--RD 652
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G L GS+ + +++V G+ + + G G V SV + R G+ TLV+G
Sbjct: 653 GKTLVSGSDDKTIKLWNVETGQEI-----RTLKGHG---GTVYSVNFSRDGK---TLVSG 701
Query: 348 GSDGLLHVF 356
D + ++
Sbjct: 702 SDDKTIKLW 710
>gi|17230611|ref|NP_487159.1| hypothetical protein alr3119 [Nostoc sp. PCC 7120]
gi|17132214|dbj|BAB74818.1| alr3119 [Nostoc sp. PCC 7120]
Length = 676
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 40/308 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P+ A+G + I+++N+K+ + + HS +P
Sbjct: 394 VNSVAFSPNGEFLASGSDDKTIKVWNLKN---KQKIHTLPGHSGWVWAIAFSP------- 443
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G+ L S D + ++L I H + V SV +S L ASGS D
Sbjct: 444 -----DGKTLASTGADKTIKLWNLATGKEIRHLKGHS-QGVASVAFSPDGKTL-ASGSLD 496
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRKM 222
T+++W+P GK + T+Q +S V V F P G +L A+G DK K + K+
Sbjct: 497 KTIKLWNPAT--GKEIRTLQEHSS--GVANVAFSPDGKTL-ASGSWDKTIKLWNLTTSKV 551
Query: 223 VDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ GH V + F D TL + D +KLWN++ + IRT +GH + N V
Sbjct: 552 IH---TLKGHSDLVMSVAFNSDSQTLASGSKDKTIKLWNLSTGKTIRTLRGHSDKVNSVA 608
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
V R +L GS N + ++++ G E + + G++ S+ + D
Sbjct: 609 Y-VPRDSTVLASGSNDNTIKLWNLTTG--------EIIRTLKRDSGYIYSIV---ISPDG 656
Query: 342 CTLVAGGS 349
L +GGS
Sbjct: 657 RNLASGGS 664
>gi|425453866|ref|ZP_18833619.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 9807]
gi|389799972|emb|CCI20521.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 9807]
Length = 1247
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++++S V+ ++ YY +++
Sbjct: 919 TDWICSVAFSPDGKTLISGSGDQTIRLWSVES----GEVIQILQEK----YYWVLLYQVA 970
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+G+++ S +D ++ +D+ EH +RVWS+ +S +L SG
Sbjct: 971 V-----SANGQLIASTSHDNIIKLWDIRTDEKYTFAPEHQ-KRVWSIAFSPNSQIL-VSG 1023
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F P G L+A G D+ + +
Sbjct: 1024 SGDNSVKLWSVPR---GFCLKTFE--EHQAWVLSVTFSPDGR-LIATGSEDRTIKLWSIE 1077
Query: 221 K-MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +K+W V D R+I +++GH +
Sbjct: 1078 DDMTQSLRTFKGHQGRIWSVVFSSDGQRLASSSDDQTVKVWQVKDGRLINSFEGHKSWVW 1137
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV G+
Sbjct: 1138 SVAFS--PDGKLLASGGDDATIRIWDVETGQ 1166
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 23/232 (9%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 628 LLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIIKIW 686
Query: 171 DPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D C S PS A S +A G DK + V + + +
Sbjct: 687 SITTDLSINCHSLPHPSQKHQAPIRAVAFSADSKFLATGSEDKTIKIWSV-ETGECLHTL 745
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH++ V + F L+ +G+ D +K+W+VN + T GH + V S G
Sbjct: 746 EGHQERVGGVTFSPNGQLLASGSADKTIKIWSVNTGECLHTLTGHQDWVWQVAFS--SDG 803
Query: 289 GLLGCGSETNQVFVYDVRWGEP------------VWVHDFEP---VTAAGSE 325
LL GS + ++ + GE +W F P A+GSE
Sbjct: 804 QLLASGSGDKTIKIWSIIEGEYQNIDTLEGHESWIWSIAFSPDGQYIASGSE 855
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 60/290 (20%), Positives = 119/290 (41%), Gaps = 38/290 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ +G + F P+ + A+G + I+I+++ + H + D
Sbjct: 750 ERVGGVTFSPNGQLLASGSADKTIKIWSVNTGECLHTLTGHQD----------------- 792
Query: 103 LKWKPGTS--GRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W+ S G++L SG D + + +E + + E +WS+ +S D A
Sbjct: 793 WVWQVAFSSDGQLLASGSGDKTIKIWSIIEGEYQNIDTLEGHESWIWSIAFSP-DGQYIA 851
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+D T+++W + +C+ +R + + F P S + +G D+ + +
Sbjct: 852 SGSEDFTLRLWSVKTR--ECLQCFGGYGNR--LSSITFSP-DSQYILSGSIDRSIRLWSI 906
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + +GH + + F D TL++ D ++LW+V VI+ +
Sbjct: 907 KNH-KCLQQINGHTDWICSVAFSPDGKTLISGSGDQTIRLWSVESGEVIQILQEKYYWVL 965
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
++V +G L+ S N + ++D+R E VW F P
Sbjct: 966 LYQVAVSANGQLIASTSHDNIIKLWDIRTDEKYTFAPEHQKRVWSIAFSP 1015
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQM 169
GR++ +G D + + +E + R G + R+WSV +S L AS SDD T+++
Sbjct: 1059 GRLIATGSEDRTIKLWSIEDDMTQSLRTFKGHQGRIWSVVFSSDGQRL-ASSSDDQTVKV 1117
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + G+ +++ + +S V V F P G L+A+G D +DV L+
Sbjct: 1118 W--QVKDGRLINSFE--GHKSWVWSVAFSPDGK-LLASGGDDATIRIWDVETGQLHQLLC 1172
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
H K+V + F + +TL +A D +KLWN+
Sbjct: 1173 Q-HTKSVRSVCFSPNGNTLASASEDETIKLWNL 1204
Score = 37.7 bits (86), Expect = 7.9, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 21/179 (11%)
Query: 145 VWSVDYSKGDPVLG-----ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
+ S+ S+ DP L A+G G + +W + DG +S P A S V V +
Sbjct: 611 ILSISCSQFDPSLPREYLLATGDSHGMIYLWKVKQDGKLELSKSFP-AHGSWVWSVALNS 669
Query: 200 FGSSLVAAGCAD--------KKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTA 250
G L+A+G D + + + P H+ + + F D L T
Sbjct: 670 EGQ-LLASGGQDGIIKIWSITTDLSINCHSLPHPS---QKHQAPIRAVAFSADSKFLATG 725
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
D +K+W+V + T +GH G++ +G LL GS + ++ V GE
Sbjct: 726 SEDKTIKIWSVETGECLHTLEGH--QERVGGVTFSPNGQLLASGSADKTIKIWSVNTGE 782
>gi|75909029|ref|YP_323325.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
gi|75702754|gb|ABA22430.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
Length = 1196
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG +DG++ +D++ + +H G VWSV +S L SGS D ++++W
Sbjct: 627 GQTLASGGHDGLIKLWDVQTGNCLKTLAQHEG-IVWSVRFSPDGQTL-VSGSLDASIRLW 684
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R G+C+ + S VC V F+P G S++A+G D +D+ + V
Sbjct: 685 DIR--RGECLKILH--GHTSGVCSVRFNPDG-SILASGSQDCDIRLWDL-NTDKCIKVLQ 738
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D TL ++ +D ++LWNV+ I+T+ GH N V S G
Sbjct: 739 GHAGNVRAVCFSPDGKTLASSSSDHSVRLWNVSKGTCIKTFHGHKNEVWSVCFS--SDGQ 796
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
+ GS + V ++DV+ G V
Sbjct: 797 TIATGSYDSSVRLWDVQQGTCV 818
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
++L +GD DG + + + + + H VW+V +S L ASG DG +++WD
Sbjct: 586 KLLATGDQDGQIHLWQMANRKNLLTFKGHECV-VWTVAFSPDGQTL-ASGGHDGLIKLWD 643
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
+ G C+ T+ + V V F P G +LV +G D +D+R+ + + + G
Sbjct: 644 VQT--GNCLKTL--AQHEGIVWSVRFSPDGQTLV-SGSLDASIRLWDIRRG-ECLKILHG 697
Query: 232 HRKTVTYIRFLDVDTLVTAGTDGC-LKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
H V +RF +++ +G+ C ++LW++N + I+ +GH N V S G
Sbjct: 698 HTSGVCSVRFNPDGSILASGSQDCDIRLWDLNTDKCIKVLQGHAGNVRAVCFS--PDGKT 755
Query: 291 LGCGSETNQVFVYDVRWG 308
L S + V +++V G
Sbjct: 756 LASSSSDHSVRLWNVSKG 773
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 24/229 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P S+ A+G + I+++++ S H + + H+ ++S+ + P
Sbjct: 919 VSFSPDGSILASGSHDKSIKLWDVIS---GHCITTLYGHN----------GGVTSVSFSP 965
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L S D V +D+ ++ + + H G +WSV +S L A+ S D +
Sbjct: 966 --DGQTLASASRDKSVKLWDIHERKCVKTLEGHTG-DIWSVSFSPDGNTL-ATASADYLV 1021
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD D GKC++T+ V + F P G ++A G D +D +
Sbjct: 1022 KLWD--VDEGKCITTL--PGHTDGVWSLSFSPDG-KILATGSVDHSIRLWDTSNFT-CLK 1075
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
V GH T+ + F + TL +A +D ++LW++N+ +R H +
Sbjct: 1076 VLQGHTSTIWSVSFSPNGSTLASASSDQTIRLWDMNNFTCVRVLDSHTS 1124
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
+L +G DG+V +D+ H VWSV +S +L ASGS D ++++WD
Sbjct: 885 MLATGSMDGLVRLWDVASGYCTKILQGHTNW-VWSVSFSPDGSIL-ASGSHDKSIKLWD- 941
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
G C++T+ V V F P G +L A+ DK +D+ + V +GH
Sbjct: 942 -VISGHCITTLY--GHNGGVTSVSFSPDGQTL-ASASRDKSVKLWDIHER-KCVKTLEGH 996
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
+ + F D +TL TA D +KLW+V++ + I T GH + LS G +L
Sbjct: 997 TGDIWSVSFSPDGNTLATASADYLVKLWDVDEGKCITTLPGHTD--GVWSLSFSPDGKIL 1054
Query: 292 GCGSETNQVFVYD 304
GS + + ++D
Sbjct: 1055 ATGSVDHSIRLWD 1067
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 33/231 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIK-----SVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ F P +G + IR+++I+ +L H S VC S
Sbjct: 663 VRFSPDGQTLVSGSLDASIRLWDIRRGECLKILHGHT-------SGVC-----------S 704
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+++ P G +L SG D + +DL I H G V +V +S L AS S
Sbjct: 705 VRFNP--DGSILASGSQDCDIRLWDLNTDKCIKVLQGHAGN-VRAVCFSPDGKTL-ASSS 760
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D ++++W+ G C+ T ++ V V F G + +A G D +DV++
Sbjct: 761 SDHSVRLWN--VSKGTCIKTFH--GHKNEVWSVCFSSDGQT-IATGSYDSSVRLWDVQQG 815
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
V +F GH V + F +V+A D +++WN++ +RT +GH
Sbjct: 816 T-CVKIFHGHTSDVFSVIFSSDRHIVSAAQDFSVRIWNISKGVCVRTLQGH 865
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G +L SG +D + +D+ I H G V SV +S L AS S D ++++W
Sbjct: 925 GSILASGSHDKSIKLWDVISGHCITTLYGHNGG-VTSVSFSPDGQTL-ASASRDKSVKLW 982
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D KCV T++ + V F P G++L A AD +DV + +
Sbjct: 983 D--IHERKCVKTLE--GHTGDIWSVSFSPDGNTL-ATASADYLVKLWDVDEG-KCITTLP 1036
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D L T D ++LW+ ++ ++ +GH + V S +G
Sbjct: 1037 GHTDGVWSLSFSPDGKILATGSVDHSIRLWDTSNFTCLKVLQGHTSTIWSVSFS--PNGS 1094
Query: 290 LLGCGSETNQVFVYDV 305
L S + ++D+
Sbjct: 1095 TLASASSDQTIRLWDM 1110
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
L+A G D + + + + + +L F GH V + F D TL + G DG +KLW+V
Sbjct: 587 LLATGDQDGQIHLWQMANRKN-LLTFKGHECVVWTVAFSPDGQTLASGGHDGLIKLWDVQ 645
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA 322
++T H V S G L GS + ++D+R GE + +
Sbjct: 646 TGNCLKTLAQHEGIVWSVRFS--PDGQTLVSGSLDASIRLWDIRRGECLKIL-------- 695
Query: 323 GSERGFVSSVCWRRVGEDECTLVAGGSD 350
G S VC R D L +G D
Sbjct: 696 ---HGHTSGVCSVRFNPDGSILASGSQD 720
>gi|334117992|ref|ZP_08492082.1| serine/threonine protein kinase with WD40 repeats [Microcoleus
vaginatus FGP-2]
gi|333459977|gb|EGK88587.1| serine/threonine protein kinase with WD40 repeats [Microcoleus
vaginatus FGP-2]
Length = 695
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 32/276 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SDS+ + +P ++ A+ + I+++N+++ H HS + +P
Sbjct: 408 SDSVNAVVINPQGNILASASDDKTIKLWNLQTGEFIH---TFFGHSARVNAVAISP---- 460
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI--FERD-----EHGGRRVWSVDYSKGD 154
GR++ SG +D V+E+ L+KK I F D H V+SV +S
Sbjct: 461 --------DGRIMVSGSFDRKVIEWKLDKKAMIREFYSDFGSPYSHRYGSVYSVAFSCDS 512
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
+ AS S D ++++W+ R G V + S V V F P S ++A+G ADK
Sbjct: 513 GAI-ASASGDQSIKLWNQR--NGALVQKL--SGHSDKVLSVSFRP-QSMMLASGSADKTI 566
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ V + + V F GH V I F D +V+ D +KLWN + +I T +GH
Sbjct: 567 KMWLV-GIGESVRTFVGHSDGVYAIAFSQDGKMIVSGSADATVKLWNADTGELINTLRGH 625
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ V +S R ++ GS V ++++ GE
Sbjct: 626 SDAVISVAISPDRE--IMASGSRDGTVKLWNLETGE 659
>gi|390437622|ref|ZP_10226156.1| Genome sequencing data, contig C310 [Microcystis sp. T1-4]
gi|389838949|emb|CCI30278.1| Genome sequencing data, contig C310 [Microcystis sp. T1-4]
Length = 1247
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 70/271 (25%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++ +S V+ ++ DY++ L
Sbjct: 919 TDWICSVAFSPDGKTLISGSGDQTIRLWSGES----GKVIKILQEK---DYWVL----LH 967
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ P +G+++ S +D + +D+ EH +RVWS+ +S +L SG
Sbjct: 968 QVAVSP--NGQLIASTSHDNTIKLWDIRTDEKYTFSPEHQ-KRVWSIAFSPNSQML-VSG 1023
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F P G L+A G D+ + +
Sbjct: 1024 SGDNSVKLWSVPR---GFCLKTFE--EHQAWVLSVTFSPDGR-LIATGSEDRTIKLWSIE 1077
Query: 221 K-MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +K+W V D R+I +++GH +
Sbjct: 1078 DDMTQSLRTFKGHQGRIWSVVFSSDGQRLASSSDDQTVKVWQVKDGRLINSFEGHKSWVW 1137
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV GE
Sbjct: 1138 SVAFS--PDGKLLASGGDDATIRIWDVETGE 1166
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 28/252 (11%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A T+++ WD +RT + SP + I F P+ + +G ++++++
Sbjct: 979 ASTSHDNTIKLWD--IRTDEKYTFSPEH--QKRVWSIAFSPNSQMLVSGSGDNSVKLWSV 1034
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
+ +H A + S+ + P GR++ +G D + + +E
Sbjct: 1035 PRGFC---LKTFEEHQ----------AWVLSVTFSP--DGRLIATGSEDRTIKLWSIEDD 1079
Query: 132 VPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS 190
+ R G + R+WSV +S L AS SDD T+++W + G+ +++ + +S
Sbjct: 1080 MTQSLRTFKGHQGRIWSVVFSSDGQRL-ASSSDDQTVKVW--QVKDGRLINSFE--GHKS 1134
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVT 249
V V F P G L+A+G D +DV L+ + H K+V + F + TL +
Sbjct: 1135 WVWSVAFSPDGK-LLASGGDDATIRIWDVETGELHQLLCE-HTKSVRSVCFSPNGKTLAS 1192
Query: 250 AGTDGCLKLWNV 261
AG D +KLWN+
Sbjct: 1193 AGEDETIKLWNL 1204
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 628 LLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIVKIW 686
Query: 171 DPRCDGG-KCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
D C S PS A + V F S +A G DK + V + + +
Sbjct: 687 SITTDISINCHSLPHPSQKHYAPIRSVTFSA-DSKFLATGSEDKTIKIWSV-ETGECLHT 744
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+GH++ V + F L+ +G+ D +K+W+V+ + T GH + V S
Sbjct: 745 LEGHQERVGGVTFSPNGQLLASGSADKTIKIWSVDTGECLHTLTGHQDWVWQVAFS--SD 802
Query: 288 GGLLGCGSETNQVFVYDVRWGE 309
G LL GS + ++ + GE
Sbjct: 803 GQLLASGSGDKTIKIWSIIEGE 824
Score = 42.7 bits (99), Expect = 0.25, Method: Composition-based stats.
Identities = 57/290 (19%), Positives = 118/290 (40%), Gaps = 38/290 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ +G + F P+ + A+G + I+I+++ + H + D
Sbjct: 750 ERVGGVTFSPNGQLLASGSADKTIKIWSVDTGECLHTLTGHQD----------------- 792
Query: 103 LKWKPGTS--GRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W+ S G++L SG D + + +E + + +WS+ +S D A
Sbjct: 793 WVWQVAFSSDGQLLASGSGDKTIKIWSIIEGEYQNIDTLTGHESWIWSIAFSP-DGQYIA 851
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+D T+++W + +C+ + +R + + F S + +G D+ + +
Sbjct: 852 SGSEDFTLRLWSVKTR--ECLQCFRGYGNR--LSSITFST-DSQYILSGSIDRSIRLWSI 906
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + +GH + + F D TL++ D ++LW+ +VI+ +
Sbjct: 907 KNH-KCLQQINGHTDWICSVAFSPDGKTLISGSGDQTIRLWSGESGKVIKILQEKDYWVL 965
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
++V +G L+ S N + ++D+R E VW F P
Sbjct: 966 LHQVAVSPNGQLIASTSHDNTIKLWDIRTDEKYTFSPEHQKRVWSIAFSP 1015
>gi|301603714|ref|XP_002931485.1| PREDICTED: e3 ubiquitin-protein ligase RFWD2-like [Xenopus
(Silurana) tropicalis]
Length = 78
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+VF GHRK V+Y +F++ D +V+A TD LKLWNV+ +R++KGH+N +NFVGL+
Sbjct: 1 MVFKGHRKAVSYAKFVNGDEIVSASTDSQLKLWNVSRPHCLRSFKGHINEKNFVGLA--S 58
Query: 287 HGGLLGCG 294
+G + CG
Sbjct: 59 NGDYIACG 66
>gi|158336397|ref|YP_001517571.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158306638|gb|ABW28255.1| WD-repeat protein [Acaryochloris marina MBIC11017]
Length = 1188
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 86/321 (26%), Positives = 131/321 (40%), Gaps = 58/321 (18%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIK-----SVLVDHPVVAVVDHSKVCDYY 93
A D+I + F V A+ + IR++N+ +VL H
Sbjct: 645 AGHQDAIWSVAFSREGDVLASCSSDQTIRLWNLAEGRCLNVLQGHD-------------- 690
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
A + S+ + P S L S D V +DLE I H VWSV +S
Sbjct: 691 ----APVHSVAFSPQNS--YLASSSADSTVKLWDLETGECINTFQGHN-ETVWSVAFSPT 743
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
P L ASGS+D TM++WD G+C+ + S +A+ V+F G +L A+G D
Sbjct: 744 SPYL-ASGSNDKTMRLWD--LQSGQCLMCL--SGHSNAIVSVDFSADGQTL-ASGSQDNT 797
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKG 272
+D V F H V + F L+ +G+ D ++LWN+ + RT+ G
Sbjct: 798 IRLWDTSSG-HCVACFTDHTSWVWSVSFAHSSNLLASGSQDRSVRLWNIAKGKCFRTFSG 856
Query: 273 HVNNRNFVGLSVWR-----HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG 327
N +VW G L GS+ + +D + G+ + H + G
Sbjct: 857 FTN-------TVWSLVFTPEGNRLISGSQDGWIRFWDTQRGDCLQAH---------QQEG 900
Query: 328 FVSSVCWRRVGEDECTLVAGG 348
FVS+V + D L +GG
Sbjct: 901 FVSTVA---ISPDGHLLASGG 918
Score = 46.2 bits (108), Expect = 0.027, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 14/172 (8%)
Query: 142 GRRVW--SVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
G W S+ +S GD + ASGS D T+++WD D G+C++T+ + + A+ V F
Sbjct: 604 GHTAWISSIAFSPNGDRL--ASGSFDHTLRIWD--IDTGQCLNTL--AGHQDAIWSVAFS 657
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLK 257
G L A+ +D+ +++ + + V GH V + F ++ L ++ D +K
Sbjct: 658 REGDVL-ASCSSDQTIRLWNLAEG-RCLNVLQGHDAPVHSVAFSPQNSYLASSSADSTVK 715
Query: 258 LWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
LW++ I T++GH N ++ L GS + ++D++ G+
Sbjct: 716 LWDLETGECINTFQGH--NETVWSVAFSPTSPYLASGSNDKTMRLWDLQSGQ 765
Score = 45.8 bits (107), Expect = 0.034, Method: Composition-based stats.
Identities = 79/314 (25%), Positives = 122/314 (38%), Gaps = 45/314 (14%)
Query: 12 AETTNERARCEWDFNL-RTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYN 70
A +N++ WD + + S NA VS ++F A+G IR+++
Sbjct: 748 ASGSNDKTMRLWDLQSGQCLMCLSGHSNAIVS-----VDFSADGQTLASGSQDNTIRLWD 802
Query: 71 IKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP--GTSGRVLGSGDYDGVVMEYDL 128
S H V DH+ S W S +L SG D V +++
Sbjct: 803 TSS---GHCVACFTDHT--------------SWVWSVSFAHSSNLLASGSQDRSVRLWNI 845
Query: 129 EKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSA 187
K F VWS+ ++ +G+ ++ SGS DG ++ WD + G C+ Q
Sbjct: 846 AKG-KCFRTFSGFTNTVWSLVFTPEGNRLI--SGSQDGWIRFWDTQ--RGDCL---QAHQ 897
Query: 188 SRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDV---RKMVDPVLVFDGHRKTVTYIRFLD 243
V V P G L + G A D K +D+ R + + FD R I F
Sbjct: 898 QEGFVSTVAISPDGHLLASGGYAQDNKLKIWDLDNDRLHSNLPVSFDVTRA----ITFSP 953
Query: 244 VDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFV 302
L+ +D G L+LW+VN + +GH N V S G LL G + +
Sbjct: 954 DGNLLACTSDLGDLQLWDVNAGLCTQRLQGHSNAIWSVAFS--PDGCLLASGGMDQTLRL 1011
Query: 303 YDVRWGEPVWVHDF 316
+ V G V ++
Sbjct: 1012 WQVENGSCCEVFEY 1025
>gi|186685368|ref|YP_001868564.1| hypothetical protein Npun_F5300 [Nostoc punctiforme PCC 73102]
gi|186467820|gb|ACC83621.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
Length = 1181
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 26/263 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P+ + ATG +IR+Y + + ++ H+ + S+ + P
Sbjct: 569 VAFSPNGKLLATGDTNGEIRLYEVAN---SQQLMTCKGHT----------GWVWSVTFSP 615
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+VL SG D + +D+ + + H G V SV ++ D L ASGSDD T+
Sbjct: 616 --DGQVLASGSNDQTIKLWDISNGQCLKTLEGHSGG-VRSVTFNP-DSQLLASGSDDQTV 671
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ GKC+ T+Q + ++ V F+P G L A+G D K +D+ +
Sbjct: 672 KLWN--ISTGKCLKTLQENGC--SIWSVAFNPKGDVL-ASGNDDYKVRLWDINSN-SCIH 725
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+GH + V + F D +T+ +A D +KLW+ + + I+T +GH + + V SV
Sbjct: 726 TLEGHTQRVYSVCFSPDGNTIASASHDQTVKLWDTSTGKYIKTLQGHTDLVHSVTFSV-D 784
Query: 287 HGGLLGCGSETNQVFVYDVRWGE 309
L+ CG + V V+D G+
Sbjct: 785 GSALVSCGDD-QTVRVWDFVSGQ 806
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 34/301 (11%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A +N++ WD + + V+ S+G F P + A+G + +R++++
Sbjct: 874 ASGSNDQTVTLWDITAGKCIKTLREHGRRVT-SVG---FSPDAHLLASGSEDQTVRLWDL 929
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
+ SK +++S+ + L SG D + +D+
Sbjct: 930 ST-------------SKCLKILKGHSNRVTSVTFS--ADSYFLASGSDDQTIRIWDITTG 974
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
+ EH GR WSV +S VL ASGS D T+++WD R G+C+ T+Q
Sbjct: 975 QCLNALREHSGR-TWSVTFSPDSHVL-ASGSHDQTVKLWDVRT--GRCLHTLQ--GHTEW 1028
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
V V F P G ++A+G D+ +DV + H TV + F ++ +G
Sbjct: 1029 VWGVAFSPNGG-MLASGSGDQTIKLWDV-STGQCIRTLQDHTNTVYSVAFSSDGRILASG 1086
Query: 252 T-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG--LLGCGSETNQVFVYDVRWG 308
+ D +KLW+VN +RT GH +V +R ++ C SE + ++DV+ G
Sbjct: 1087 SGDQTVKLWDVNTGSCLRTLLGHT---RWVWSVTFRSDDQTVVSC-SEDETIKIWDVQTG 1142
Query: 309 E 309
E
Sbjct: 1143 E 1143
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 22/194 (11%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
+WSV S D + ASGS+D T+ +WD GKC+ T++ R V V F P + L
Sbjct: 860 IWSVAVSPTDNNILASGSNDQTVTLWD--ITAGKCIKTLREHGRR--VTSVGFSP-DAHL 914
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVND 263
+A+G D+ +D+ + + GH VT + F D L + D +++W++
Sbjct: 915 LASGSEDQTVRLWDL-STSKCLKILKGHSNRVTSVTFSADSYFLASGSDDQTIRIWDITT 973
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG----------EPVWV 313
+ + + H V S H +L GS V ++DVR G E VW
Sbjct: 974 GQCLNALREHSGRTWSVTFSPDSH--VLASGSHDQTVKLWDVRTGRCLHTLQGHTEWVWG 1031
Query: 314 HDFEP---VTAAGS 324
F P + A+GS
Sbjct: 1032 VAFSPNGGMLASGS 1045
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 25/269 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + F+P + A+G + ++++NI + K +
Sbjct: 647 SGGVRSVTFNPDSQLLASGSDDQTVKLWNIST-------------GKCLKTLQENGCSIW 693
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G VL SG+ D V +D+ I + H +RV+SV +S + AS
Sbjct: 694 SVAFNP--KGDVLASGNDDYKVRLWDINSNSCIHTLEGHT-QRVYSVCFSPDGNTI-ASA 749
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD GK + T+Q V V F GS+LV+ G D+ +D
Sbjct: 750 SHDQTVKLWDTST--GKYIKTLQ--GHTDLVHSVTFSVDGSALVSCG-DDQTVRVWDFVS 804
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ GH+ V + ++ + ++ D +KLWN++ R I+T++G+ N V
Sbjct: 805 G-QCLKTLQGHKSRVWSLAICINQNICASSSDDQTVKLWNMSTGRCIKTFQGYNNGIWSV 863
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+S +L GS V ++D+ G+
Sbjct: 864 AVSP-TDNNILASGSNDQTVTLWDITAGK 891
>gi|427736391|ref|YP_007055935.1| WD40 repeat-containing protein [Rivularia sp. PCC 7116]
gi|427371432|gb|AFY55388.1| WD40 repeat-containing protein [Rivularia sp. PCC 7116]
Length = 1546
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 30/293 (10%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A + +R WDFN + + VSD + F A+G R I+++ I
Sbjct: 1279 ASSGGDRTIKTWDFNTGNHLKTLQGHLHPVSDVV----FSSDGLTLASGSHDRTIKLWEI 1334
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
K+ V + H+ + + P +++ SG D + +D+
Sbjct: 1335 KT---GKCVKTLKGHTYWVNSVVLNP------------DNKIIISGSSDRTIKLWDISSG 1379
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
+ +EH ++S+ S D + ASGS DGT+++W+ G+C+ T+Q S
Sbjct: 1380 KCLRTLEEHNAG-IFSLVMSP-DGITLASGSGDGTIKLWNIHT--GECLKTLQLKDSHCG 1435
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
+ ++F+ GS L+AAG ++ +DVRK + GH VT + F D L+ +G
Sbjct: 1436 ISSIKFNSDGS-LIAAGNIEETIKIWDVRKG-KCIKTLKGHTNRVTSVAFTPDDKLLVSG 1493
Query: 252 T-DGCLKLWNVNDSRVIRTYK----GHVNNRNFVGLSVWRHGGLLGCGSETNQ 299
+ D +K+WN+ I+T ++N N GL+ + L G+ N
Sbjct: 1494 SFDETIKIWNIQTGECIKTLSNKPYANMNITNVTGLTPEQKSSLKALGAVENN 1546
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
++G +L S D + +D+ I + H +W V + + +L SGS D +
Sbjct: 1020 NSNGTILASSSDDQTIKIWDVNTGQCINTLEGHTSP-IWRVKIAPNNKIL-VSGSSDSCI 1077
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDP 225
++WD G C+ ++ + ++ + F S + A+G DK +D K +
Sbjct: 1078 KIWD--ISKGICLKNLEEH--QDSILSITF-SHDSQIFASGSKDKIIQIWDTNTGKCIKN 1132
Query: 226 VLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
++ GH T+ + F + TL + TD +K+W+VND ++T H N +++
Sbjct: 1133 LI---GHSGTIRSLAFSKNNKTLFSGSTDSTIKIWSVNDGECLKTITAH--NSRVRKIAL 1187
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGE 309
G +L S+ + ++D GE
Sbjct: 1188 NSKGEILASCSDDQTIKLWDANTGE 1212
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
++ SG D ++ +D I H G + S+ +SK + L SGS D T+++W
Sbjct: 1108 QIFASGSKDKIIQIWDTNTGKCIKNLIGHSGT-IRSLAFSKNNKTL-FSGSTDSTIKIWS 1165
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
+ G+C+ T+ +A S V + + G L A C+D + + + G
Sbjct: 1166 --VNDGECLKTI--TAHNSRVRKIALNSKGEIL--ASCSDDQTIKLWDANTGECIQTLQG 1219
Query: 232 HRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
V + LD T+++ + +K W++N +T +GH
Sbjct: 1220 CSHWVVSVTVSLDGKTIISGNNNKTIKYWDINTGHCFKTLRGH 1262
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 26/270 (9%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
DSI I F +FA+G + I+I++ + K I + S
Sbjct: 1096 DSILSITFSHDSQIFASGSKDKIIQIWDTNT-------------GKCIKNLIGHSGTIRS 1142
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
L + + + L SG D + + + + H R SKG+ + AS S
Sbjct: 1143 LAF--SKNNKTLFSGSTDSTIKIWSVNDGECLKTITAHNSRVRKIALNSKGEIL--ASCS 1198
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD T+++WD + G+C+ T+Q V V G +++ +G +K +D+
Sbjct: 1199 DDQTIKLWD--ANTGECIQTLQ--GCSHWVVSVTVSLDGKTII-SGNNNKTIKYWDINTG 1253
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
GH + V + D + ++G D +K W+ N ++T +GH++ + V
Sbjct: 1254 -HCFKTLRGHDRWVGEVTISPDGKIVASSGGDRTIKTWDFNTGNHLKTLQGHLHPVSDVV 1312
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L GS + +++++ G+ V
Sbjct: 1313 FS--SDGLTLASGSHDRTIKLWEIKTGKCV 1340
>gi|332705704|ref|ZP_08425780.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332355496|gb|EGJ34960.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 1458
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 26/249 (10%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D + ++LE I H V SV +S+ L ASGS D T+++W
Sbjct: 855 GQTLASGSDDNTIKLWNLETGEEIRTLIGHT-ETVHSVSFSRDGQTL-ASGSYDNTIKLW 912
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRKMVDPVLV 228
DP+ GK + T+ V V F G +L A+G D K + + K + ++
Sbjct: 913 DPKT--GKVIRTL--IGHTEVVRSVSFSRDGQTL-ASGSDDNTIKLWNLETGKTIRTLI- 966
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH +TV + F D TL + TD +KLW+ VIRT GH N V S R
Sbjct: 967 --GHTETVMSVSFSRDGQTLASGSTDNTIKLWDPKTGEVIRTLIGHTGRVNSVSFS--RD 1022
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G L S+ + + ++++ G + T G + F SV + R G+ TL +G
Sbjct: 1023 GQTLASESDDHTIKLWNLETGAEIH-------TLQGHDH-FFRSVSFSRDGQ---TLASG 1071
Query: 348 GSDGLLHVF 356
GSD ++ ++
Sbjct: 1072 GSDHIIKLW 1080
Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats.
Identities = 81/310 (26%), Positives = 134/310 (43%), Gaps = 35/310 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P A+G I+++N+++ + + H V +
Sbjct: 1095 NDDVMSVSFSPDGQTLASGSDDNTIKLWNLET---RREIRTLKGHDHV----------VH 1141
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + G+ L SG +D + +D + I H + S+ +S+ L AS
Sbjct: 1142 SVSFS--RDGQTLASGSFDNTIKLWDPKTGEVIRTLVGHDD-FLNSISFSRDGQTL-ASV 1197
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD T+++WDP+ GK + T+ AV V F P G +L A+G DK +D+
Sbjct: 1198 SDDKTIKLWDPKT--GKVIRTL--IGHTEAVESVSFSPDGQTL-ASGSYDKTIKLWDLET 1252
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + GH TV + F D TL + D +KLWN+ + IRT K + + V
Sbjct: 1253 GRE-IRTLIGHTYTVLSVSFSPDGQTLASGSYDTTIKLWNLETGKKIRTLKMYDSVATSV 1311
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S S N + ++D + GE + T G + V+SV + R G+
Sbjct: 1312 SFSPDGQTLASASSSSENTIKLWDPKTGEVI-------RTLIGHDND-VNSVSFSRDGQ- 1362
Query: 341 ECTLVAGGSD 350
TL +G SD
Sbjct: 1363 --TLASGSSD 1370
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ S+ + P G+ L SG YD + +DLE I H V SV +S L A
Sbjct: 1224 VESVSFSP--DGQTLASGSYDKTIKLWDLETGREIRTLIGHT-YTVLSVSFSPDGQTL-A 1279
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++W+ + GK + T++ S V F P G +L +A + +
Sbjct: 1280 SGSYDTTIKLWN--LETGKKIRTLK--MYDSVATSVSFSPDGQTLASASSSSENTIKLWD 1335
Query: 220 RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
K + + GH V + F D TL + +D +KLWN+ I T +GH++N +
Sbjct: 1336 PKTGEVIRTLIGHDNDVNSVSFSRDGQTLASGSSDETIKLWNLETGTEIVTLQGHIDNVD 1395
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDV 305
V S G L GS + ++++
Sbjct: 1396 SVSFS--SDGQTLASGSSDETIKLWNL 1420
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 23/232 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D + +D + I H GR V SV +S+ L AS SDD T+++W
Sbjct: 981 GQTLASGSTDNTIKLWDPKTGEVIRTLIGHTGR-VNSVSFSRDGQTL-ASESDDHTIKLW 1038
Query: 171 DPRCDGGKCVSTVQPSAS--RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+ + G + T+Q RS V F G +L A+G +D +D K + +
Sbjct: 1039 N--LETGAEIHTLQGHDHFFRS----VSFSRDGQTL-ASGGSDHIIKLWD-PKTGEVIRT 1090
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH V + F D TL + D +KLWN+ R IRT KGH + + V S R
Sbjct: 1091 LIGHNDDVMSVSFSPDGQTLASGSDDNTIKLWNLETRREIRTLKGHDHVVHSVSFS--RD 1148
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
G L GS N + ++D + GE + T G + F++S+ + R G+
Sbjct: 1149 GQTLASGSFDNTIKLWDPKTGEVI-------RTLVGHD-DFLNSISFSRDGQ 1192
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 54/235 (22%), Positives = 111/235 (47%), Gaps = 31/235 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++++ + F P A+G + I+++++++ + ++ H+ +
Sbjct: 1221 TEAVESVSFSPDGQTLASGSYDKTIKLWDLET---GREIRTLIGHTYT----------VL 1267
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYS-KGDPVLG 158
S+ + P G+ L SG YD + ++LE KK+ + + SV +S G +
Sbjct: 1268 SVSFSP--DGQTLASGSYDTTIKLWNLETGKKIRTLKMYDSVAT---SVSFSPDGQTLAS 1322
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS S + T+++WDP+ G+ + T+ + V V F G +L A+G +D+ ++
Sbjct: 1323 ASSSSENTIKLWDPKT--GEVIRTL--IGHDNDVNSVSFSRDGQTL-ASGSSDETIKLWN 1377
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN---DSRVIRT 269
+ + ++ GH V + F D TL + +D +KLWN++ DS + R+
Sbjct: 1378 LETGTE-IVTLQGHIDNVDSVSFSSDGQTLASGSSDETIKLWNLDLNLDSLMARS 1431
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D ++ +D + I H V SV +S L ASGSDD T+++W
Sbjct: 1065 GQTLASGGSDHIIKLWDPKTGEVIRTLIGHNDD-VMSVSFSPDGQTL-ASGSDDNTIKLW 1122
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ + + + T++ V V F G +L A+G D +D K + +
Sbjct: 1123 N--LETRREIRTLK--GHDHVVHSVSFSRDGQTL-ASGSFDNTIKLWD-PKTGEVIRTLV 1176
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH + I F D TL + D +KLW+ +VIRT GH V S G
Sbjct: 1177 GHDDFLNSISFSRDGQTLASVSDDKTIKLWDPKTGKVIRTLIGHTEAVESVSFS--PDGQ 1234
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
L GS + ++D+ G +
Sbjct: 1235 TLASGSYDKTIKLWDLETGREI 1256
Score = 43.9 bits (102), Expect = 0.14, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
G+ + VT + F D TL + D +KLWN+ IRT GH + V S R
Sbjct: 839 LQGNDQNVTSVSFSRDGQTLASGSDDNTIKLWNLETGEEIRTLIGHTETVHSVSFS--RD 896
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G L GS N + ++D + G+ + T G V SV + R G+ TL +G
Sbjct: 897 GQTLASGSYDNTIKLWDPKTGKVI-------RTLIGHTE-VVRSVSFSRDGQ---TLASG 945
Query: 348 GSDGLLHVF 356
D + ++
Sbjct: 946 SDDNTIKLW 954
>gi|47551119|ref|NP_999734.1| katanin p80 WD40 repeat-containing subunit B1 [Strongylocentrotus
purpuratus]
gi|60390160|sp|O61585.1|KTNB1_STRPU RecName: Full=Katanin p80 WD40 repeat-containing subunit B1;
Short=Katanin p80 subunit B1; AltName: Full=p80 katanin
gi|3005601|gb|AAC09329.1| katanin p80 subunit [Strongylocentrotus purpuratus]
Length = 690
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 23/248 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRV+ +G D V + + K+ I H V SV ++ + ++ A GS GTM++
Sbjct: 28 SGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSP-VDSVKFNSSEELVVA-GSQSGTMKI 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
+D + K V T+ + R+++ C++FHPFG VA+G D +DVR+ + +
Sbjct: 86 YD--LEPAKIVRTL--TGHRNSIRCMDFHPFGE-FVASGSTDTNVKLWDVRRK-GCIYTY 139
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V I+F D LVTA D +KLW++ ++ + +K H G+ +
Sbjct: 140 KGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTG--GVTGIEFHPNE 197
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS V +D + F+ V++ V S+ + G + +
Sbjct: 198 FLLASGSSDRTVQFWD--------LETFQLVSSTSPGASAVRSISFHPDG----SYLFCS 245
Query: 349 SDGLLHVF 356
S +LH F
Sbjct: 246 SQDMLHAF 253
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 29/189 (15%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLS 101
+SI ++F P A+G +++++++ K C Y Y +++
Sbjct: 102 NSIRCMDFHPFGEFVASGSTDTNVKLWDVRR--------------KGCIYTYKGHSDQVN 147
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+K+ P G+ L + D + +DL E H G V +++ + +L ASG
Sbjct: 148 MIKFSP--DGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGG-VTGIEFHPNEFLL-ASG 203
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+Q WD + + VS+ P AS AV + FHP GS L + A+ +
Sbjct: 204 SSDRTVQFWD--LETFQLVSSTSPGAS--AVRSISFHPDGSYLFCSSQDMLHAFGW---- 255
Query: 222 MVDPVLVFD 230
+P+ FD
Sbjct: 256 --EPIRCFD 262
>gi|145504575|ref|XP_001438254.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405426|emb|CAK70857.1| unnamed protein product [Paramecium tetraurelia]
Length = 2419
Score = 75.1 bits (183), Expect = 5e-11, Method: Composition-based stats.
Identities = 75/273 (27%), Positives = 119/273 (43%), Gaps = 34/273 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + F P ++ A+ + + IR++++K+ + H +S
Sbjct: 2134 SRYVNTVNFSPDGNMLASCSLDKSIRLWDVKT---GQQKAKLDGHDDA----------VS 2180
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+K+ P G L S D + +D++ + D H V+SV++S L ASG
Sbjct: 2181 SVKFSP--DGTTLVSVSSDSSIRLWDVKTGQQFAKLDGHSDA-VYSVNFSPDGTTL-ASG 2236
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCADKKAYAY 217
S D ++++WD V T Q A V V F P G++L A+G D +
Sbjct: 2237 SQDNSIRLWD--------VKTGQQKAKLDGHSHFVYSVHFSPDGTTL-ASGSRDFSIRFW 2287
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
DVR + DGH TVT + F D TL + D ++LW+V + I GH N
Sbjct: 2288 DVRTGQQKAKL-DGHSSTVTSVNFSPDGTTLASGSEDNSIRLWDVKTGQQIAKLDGHENG 2346
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G L GS N + ++DV+ G+
Sbjct: 2347 ILSVHFS--PDGTTLASGSGDNSIRLWDVKTGQ 2377
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 27/272 (9%)
Query: 16 NERARCEWDFNLRTTVSSSSSPNAAVS---DSIGVIEFDPSDSVFATGGIARKIRIYNIK 72
N A C D ++R + A + D++ ++F P + + IR++++K
Sbjct: 2147 NMLASCSLDKSIRLWDVKTGQQKAKLDGHDDAVSSVKFSPDGTTLVSVSSDSSIRLWDVK 2206
Query: 73 SVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKV 132
+ + HS + S+ + P G L SG D + +D++
Sbjct: 2207 T---GQQFAKLDGHSDA----------VYSVNFSP--DGTTLASGSQDNSIRLWDVKTGQ 2251
Query: 133 PIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAV 192
+ D H V+SV +S L ASGS D +++ WD R K + S V
Sbjct: 2252 QKAKLDGHS-HFVYSVHFSPDGTTL-ASGSRDFSIRFWDVRTGQQK----AKLDGHSSTV 2305
Query: 193 CCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAG 251
V F P G++L A+G D +DV K + DGH + + F D TL +
Sbjct: 2306 TSVNFSPDGTTL-ASGSEDNSIRLWDV-KTGQQIAKLDGHENGILSVHFSPDGTTLASGS 2363
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
D ++LW+V + GH + V S
Sbjct: 2364 GDNSIRLWDVKTGQQKAKLNGHSSTVTSVNFS 2395
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 72/259 (27%), Positives = 104/259 (40%), Gaps = 33/259 (12%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G +L S D + +D++ + D H V SV +S L S S D ++++W
Sbjct: 2146 GNMLASCSLDKSIRLWDVKTGQQKAKLDGHDDA-VSSVKFSPDGTTL-VSVSSDSSIRLW 2203
Query: 171 DPRCDGGKCVSTVQPSAS----RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
D V T Q A AV V F P G++L A+G D +DV K
Sbjct: 2204 D--------VKTGQQFAKLDGHSDAVYSVNFSPDGTTL-ASGSQDNSIRLWDV-KTGQQK 2253
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
DGH V + F D TL + D ++ W+V + GH + V S
Sbjct: 2254 AKLDGHSHFVYSVHFSPDGTTLASGSRDFSIRFWDVRTGQQKAKLDGHSSTVTSVNFS-- 2311
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
G L GSE N + ++DV+ G+ + D G E G +S D TL
Sbjct: 2312 PDGTTLASGSEDNSIRLWDVKTGQQIAKLD-------GHENGILSV----HFSPDGTTLA 2360
Query: 346 AGGSDG---LLHVFVGKKK 361
+G D L V G++K
Sbjct: 2361 SGSGDNSIRLWDVKTGQQK 2379
>gi|425445658|ref|ZP_18825684.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 9443]
gi|389734312|emb|CCI02014.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 9443]
Length = 1248
Score = 75.1 bits (183), Expect = 5e-11, Method: Composition-based stats.
Identities = 66/271 (24%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++++S V+ ++ YY +++
Sbjct: 920 TDWICSVAFSPDGKTLISGSGDQTIRLWSVES----GEVIQILQEK----YYWVLLYQVA 971
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ +++ S +D ++ +D++ EH +RVWS+ +S +L SG
Sbjct: 972 V-----SANSQLIASTSHDNIIKLWDIKTDEKYTFAPEHQ-KRVWSIAFSPNSQIL-VSG 1024
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F P G L+A G D+ + +
Sbjct: 1025 SGDNSVKLWSVPR---GFCLKTFE--EHQAWVLSVTFSPDGR-LIATGSEDRTIKLWSIE 1078
Query: 221 K-MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +K+W V D R+I +++GH +
Sbjct: 1079 DDMTQSLRTFKGHQGRIWSVVFSSDGQRLASSSDDQTVKVWQVKDGRLINSFEGHKSWVW 1138
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV G+
Sbjct: 1139 SVAFS--PDGKLLASGGDDATIRIWDVETGQ 1167
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 23/232 (9%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 629 LLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIIKIW 687
Query: 171 DPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
+ C S PS A S +A G DK + V + + +
Sbjct: 688 SITTNLSINCHSLPHPSQKHHAPIRAVAFSADSKFLATGSEDKTIKIWSV-ETGECLHTL 746
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH++ V + F L+ +G+ D +K+W+V+ + + T GH + V S G
Sbjct: 747 EGHQERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQDWVWQVAFS--SDG 804
Query: 289 GLLGCGSETNQVFVYDVRWGEP------------VWVHDFEP---VTAAGSE 325
LL GS + ++ + GE +W F P A+GSE
Sbjct: 805 QLLASGSGDKTIKIWSIIEGEYQNIDTLEGHESWIWSIAFSPDGQYIASGSE 856
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQM 169
GR++ +G D + + +E + R G + R+WSV +S L AS SDD T+++
Sbjct: 1060 GRLIATGSEDRTIKLWSIEDDMTQSLRTFKGHQGRIWSVVFSSDGQRL-ASSSDDQTVKV 1118
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + G+ +++ + +S V V F P G L+A+G D +DV L+
Sbjct: 1119 W--QVKDGRLINSFE--GHKSWVWSVAFSPDGK-LLASGGDDATIRIWDVETGQLHQLLC 1173
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN 260
+ H K+V + F + +TL +A D +KLWN
Sbjct: 1174 E-HTKSVRSVCFSPNGNTLASASEDETIKLWN 1204
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 59/290 (20%), Positives = 118/290 (40%), Gaps = 38/290 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ +G + F P+ + A+G + I+I+++ + H + D
Sbjct: 751 ERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQD----------------- 793
Query: 103 LKWKPGTS--GRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W+ S G++L SG D + + +E + + E +WS+ +S D A
Sbjct: 794 WVWQVAFSSDGQLLASGSGDKTIKIWSIIEGEYQNIDTLEGHESWIWSIAFSP-DGQYIA 852
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+D T+++W + KC+ +R + + F P S + +G D+ + +
Sbjct: 853 SGSEDFTLRLWSVKTR--KCLQCFGGYGNR--LSSITFSP-DSQYILSGSIDRSIRLWSI 907
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + +GH + + F D TL++ D ++LW+V VI+ +
Sbjct: 908 KNH-KCLQQINGHTDWICSVAFSPDGKTLISGSGDQTIRLWSVESGEVIQILQEKYYWVL 966
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
++V + L+ S N + ++D++ E VW F P
Sbjct: 967 LYQVAVSANSQLIASTSHDNIIKLWDIKTDEKYTFAPEHQKRVWSIAFSP 1016
>gi|145529465|ref|XP_001450517.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418136|emb|CAK83120.1| unnamed protein product [Paramecium tetraurelia]
Length = 419
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 26/269 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+G + IR++++K+ + HS+ ++ S+ + P
Sbjct: 58 VNFSPDGTTLASGSADKSIRLWDVKT---GQQKAKLDGHSR----------EVYSVNFSP 104
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G L SG D + +D++ + D H RV+SV++S L ASGS D ++
Sbjct: 105 --DGTTLASGSADKSIRLWDVKTGQQKAKLDGHYD-RVFSVNFSPDGTTL-ASGSYDNSI 160
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD + K + S V V F P G++L A+G D +DV K
Sbjct: 161 RLWDVKTGQQKAI----LDGHSSYVYSVNFSPDGTTL-ASGSGDNSIRLWDV-KTGQQKA 214
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+ DGH + V + F D TL + D ++LW+V + GH + V S
Sbjct: 215 ILDGHSREVYSVNFSPDGTTLASGSADKSIRLWDVKTGQQKAKLDGHSDYVMSVNFSP-- 272
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHD 315
G L GSE N + ++DV+ G+ + D
Sbjct: 273 DGTTLASGSEDNSIRLWDVKTGQQKAILD 301
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 117/269 (43%), Gaps = 26/269 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+G + IR++++K+ +K+ +Y ++ S+ + P
Sbjct: 100 VNFSPDGTTLASGSADKSIRLWDVKTG---------QQKAKLDGHY----DRVFSVNFSP 146
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G L SG YD + +D++ D H V+SV++S L ASGS D ++
Sbjct: 147 --DGTTLASGSYDNSIRLWDVKTGQQKAILDGHSSY-VYSVNFSPDGTTL-ASGSGDNSI 202
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD + K + V V F P G++L A+G ADK +DV K
Sbjct: 203 RLWDVKTGQQKAI----LDGHSREVYSVNFSPDGTTL-ASGSADKSIRLWDV-KTGQQKA 256
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
DGH V + F D TL + D ++LW+V + GH N V LS
Sbjct: 257 KLDGHSDYVMSVNFSPDGTTLASGSEDNSIRLWDVKTGQQKAILDGHSNGILSVNLSP-- 314
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHD 315
G L S N + ++D++ + + D
Sbjct: 315 DGTTLASSSIDNSIRLWDLKTSKEILQSD 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 30/235 (12%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYICTPAKLS 101
D + + F P + A+G IR++++K+ A++D HS Y+
Sbjct: 137 DRVFSVNFSPDGTTLASGSYDNSIRLWDVKT----GQQKAILDGHSS----YVY------ 182
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G L SG D + +D++ D H R V+SV++S L ASG
Sbjct: 183 SVNFSP--DGTTLASGSGDNSIRLWDVKTGQQKAILDGH-SREVYSVNFSPDGTTL-ASG 238
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++++WD + K + V V F P G++L A+G D +DV K
Sbjct: 239 SADKSIRLWDVKTGQQKA----KLDGHSDYVMSVNFSPDGTTL-ASGSEDNSIRLWDV-K 292
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVI----RTYK 271
+ DGH + + D TL ++ D ++LW++ S+ I R+YK
Sbjct: 293 TGQQKAILDGHSNGILSVNLSPDGTTLASSSIDNSIRLWDLKTSKEILQSDRSYK 347
>gi|428299376|ref|YP_007137682.1| (myosin heavy-chain) kinase [Calothrix sp. PCC 6303]
gi|428235920|gb|AFZ01710.1| (Myosin heavy-chain) kinase [Calothrix sp. PCC 6303]
Length = 1595
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 36/278 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+DS+ + F P A+G +++++I S K + +S
Sbjct: 1057 TDSVRSVSFSPDGKTLASGSGDNTVKLWDINS-------------GKEIKTFKGHTNSVS 1103
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRR--VWSVDYSKGDPVL 157
S+ + P G+ L S +D V +D+ K++ F+ GR V SV +S L
Sbjct: 1104 SVSFSP--DGKTLASASWDKTVKLWDINSGKEIKTFK-----GRTDIVNSVSFSPDGKTL 1156
Query: 158 GASGSD---DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
++ S+ +GT+++WD + GK + T++ S V V F P G +L A+ D
Sbjct: 1157 ASASSETVSEGTLKLWD--INSGKEIKTLK--GHTSIVSSVSFSPDGKTL-ASASDDSTV 1211
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+D+ + + GH V + F D TL +A D +KLW++N + I+T KGH
Sbjct: 1212 KLWDINTGKE-IKTLKGHTSMVYSVSFSPDGKTLASASGDNTVKLWDINSGKEIKTVKGH 1270
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ N V S G L S + V ++D+ G+ +
Sbjct: 1271 TGSVNSVSFS--PDGKTLASASWESTVNLWDIHSGKEI 1306
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P A+ + +++I S + ++ H+ V L+S+
Sbjct: 1273 SVNSVSFSPDGKTLASASWESTVNLWDIHS---GKEIKTLIGHTGV----------LTSV 1319
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ P G+ L S D V +D+ K++ F+ V SV +S L AS
Sbjct: 1320 SFSP--DGKTLASASDDSTVKLWDINTGKEIKTFKGHTD---VVTSVSFSPDGKTL-ASA 1373
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD + G+ + T++ R V V F P G +L A+ D +D+
Sbjct: 1374 SHDNTVKLWD--INTGREIKTLKGHKDR--VKSVSFSPDGKTL-ASASHDNTVKLWDINT 1428
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + GH V + F D TL ++ D +KLW++N + I+T KGH + N V
Sbjct: 1429 GKE-IKTLKGHTSMVHSVSFSPDGKTLASSSQDNTVKLWDINSGKEIKTVKGHTGSVNSV 1487
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L S+ + V ++D++ G +
Sbjct: 1488 SFS--PDGKTLASASDDSTVKLWDIKTGREI 1516
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 30/275 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+DS+ + F P A+ +++++I S + H+ +S
Sbjct: 973 TDSVRSVSFSPDGKTLASASDDNTVKLWDINS---GQEIKTFKGHTN----------SVS 1019
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L S D V +D+ I H V SV +S L ASG
Sbjct: 1020 SVSFSP--DGKTLASASDDKTVKLWDINSGKEIKTIPGHTD-SVRSVSFSPDGKTL-ASG 1075
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD + GK + T + ++V V F P G +L +A DK +D+
Sbjct: 1076 SGDNTVKLWD--INSGKEIKTFK--GHTNSVSSVSFSPDGKTLASASW-DKTVKLWDINS 1130
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAG----TDGCLKLWNVNDSRVIRTYKGHVNN 276
+ + F G V + F D TL +A ++G LKLW++N + I+T KGH +
Sbjct: 1131 GKE-IKTFKGRTDIVNSVSFSPDGKTLASASSETVSEGTLKLWDINSGKEIKTLKGHTSI 1189
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ V S G L S+ + V ++D+ G+ +
Sbjct: 1190 VSSVSFS--PDGKTLASASDDSTVKLWDINTGKEI 1222
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L S +D V +D+ I H R V SV +S L AS S D T+++W
Sbjct: 1367 GKTLASASHDNTVKLWDINTGREIKTLKGHKDR-VKSVSFSPDGKTL-ASASHDNTVKLW 1424
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + GK + T++ S V V F P G +L A+ D +D+ + +
Sbjct: 1425 D--INTGKEIKTLK--GHTSMVHSVSFSPDGKTL-ASSSQDNTVKLWDINSGKE-IKTVK 1478
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
GH +V + F D TL +A D +KLW++ R I+T+KGH
Sbjct: 1479 GHTGSVNSVSFSPDGKTLASASDDSTVKLWDIKTGREIKTFKGHT 1523
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 219 VRKMVDP--VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+R++VD + GH +V + F D TL +A D +KLW++N + I+T+KGH N
Sbjct: 957 LREVVDEFHIRTLKGHTDSVRSVSFSPDGKTLASASDDNTVKLWDINSGQEIKTFKGHTN 1016
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ + V S G L S+ V ++D+ G+ +
Sbjct: 1017 SVSSVSFS--PDGKTLASASDDKTVKLWDINSGKEI 1050
>gi|332706036|ref|ZP_08426108.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332355128|gb|EGJ34596.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 659
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 147/332 (44%), Gaps = 34/332 (10%)
Query: 26 NLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD 85
N R V ++++ N SD I + F P A+G + I+++ +K+ +
Sbjct: 360 NPRIIVFAATTLNGH-SDEIYSVAFSPDGRTLASGCRDKTIKLWELKTAW---------E 409
Query: 86 HSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRV 145
++ A++ ++ + P G+ L SG D + +++ IF H G V
Sbjct: 410 ILTFGGWFSKHSAEVRAVAFSP--QGKSLASGSADETIKLWNVRNGKEIFTFTGHSGD-V 466
Query: 146 WSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
S+ + L ASG+ D T+++WD R K ++T+ + S + V F P G ++
Sbjct: 467 NSIAFHPQGYHL-ASGASDRTIKLWDVRTL--KQLTTL--TGHSSLINSVAFRPDGQ-IL 520
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDS 264
A+G AD +D + + F+GH V I F + TL +A DG +KLW+++ +
Sbjct: 521 ASGSADATIKLWDALSGQE-IHTFEGHSDQVLAIAFTPNGQTLASASADGTIKLWDISTA 579
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGS 324
+ I T GH N ++ R G +L GS + ++DV + + G+
Sbjct: 580 QEITTLNGH--NGWVYAIAFDRSGQILASGSADTTIKLWDVDTTQEI-----------GT 626
Query: 325 ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
G ++ G + TL +G D + ++
Sbjct: 627 LNGHSDTIHALAFGPNNRTLASGSFDNTIKIW 658
>gi|145548369|ref|XP_001459865.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427692|emb|CAK92468.1| unnamed protein product [Paramecium tetraurelia]
Length = 735
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 152/382 (39%), Gaps = 86/382 (22%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYIC------ 95
S S+ + F P S A+G + IR++++K+ + H+K Y +C
Sbjct: 112 SASVTSVNFSPDGSTLASGSDDKSIRLWDVKT---GQQKAQLDGHTKTV-YSVCFSPDGT 167
Query: 96 -------------------TPAKL-------SSLKWKPGTSGRVLGSGDYDGVVMEYDLE 129
AKL SS+ + P G L SG YD + +D++
Sbjct: 168 NLASGSDKSIRLWDAKTGQQKAKLKGHSTSVSSINFSP--DGTTLASGSYDNSIRLWDVK 225
Query: 130 KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASR 189
E D H V SV++S L ASGSDD ++++WD + K +
Sbjct: 226 TGQQKAELDGH-SDYVRSVNFSPDGTTL-ASGSDDKSIRLWDVKTGQQKA----KFDGHS 279
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
+ V V+F G +L A+G D +DV K DGH +V+ I F D TL
Sbjct: 280 NWVKSVQFSTDGLTL-ASGSDDNSIRLWDV-KTGQQKAKLDGHSTSVSSINFSPDGTTLA 337
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ D ++LW+V + GH N+ N V S G L GS N + ++DV+ G
Sbjct: 338 SGSYDNSIRLWDVKTGQQNANLDGHSNSVNSVCFS--PDGTTLASGSLDNSIRLWDVKTG 395
Query: 309 ----------EPVWVHDFEP---VTAAGSE---------------------RGFVSSVCW 334
E V+ +F P A+GSE +V SV
Sbjct: 396 QQKAKLDGHSETVYSVNFSPDGTTLASGSEDNSIRFWDVKTGQQKAKLDGHSNWVKSV-- 453
Query: 335 RRVGEDECTLVAGGSDGLLHVF 356
+ D TL +G SD +H++
Sbjct: 454 -QFSTDGLTLASGSSDKSIHLW 474
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 27/261 (10%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + A+G IR++++K+ + HS A ++S+ + P
Sbjct: 78 FSPDGTTLASGSDDNSIRLWDVKT---GQQKAKLDGHS----------ASVTSVNFSP-- 122
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G L SG D + +D++ + D H + V+SV +S L ASGSD ++++
Sbjct: 123 DGSTLASGSDDKSIRLWDVKTGQQKAQLDGH-TKTVYSVCFSPDGTNL-ASGSDK-SIRL 179
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + ++V + F P G++L A+G D +DV K
Sbjct: 180 WDAKTGQQKA----KLKGHSTSVSSINFSPDGTTL-ASGSYDNSIRLWDV-KTGQQKAEL 233
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
DGH V + F D TL + D ++LW+V + + GH N V S G
Sbjct: 234 DGHSDYVRSVNFSPDGTTLASGSDDKSIRLWDVKTGQQKAKFDGHSNWVKSVQFST--DG 291
Query: 289 GLLGCGSETNQVFVYDVRWGE 309
L GS+ N + ++DV+ G+
Sbjct: 292 LTLASGSDDNSIRLWDVKTGQ 312
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Query: 131 KVPIFERDEHGGRR--VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
K+ I E + G V SV +S L ASGSDD ++++WD + K +
Sbjct: 57 KIKIHELNRLDGHTNCVNSVCFSPDGTTL-ASGSDDNSIRLWDVKTGQQKA----KLDGH 111
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
++V V F P GS+L A+G DK +DV K DGH KTV + F T +
Sbjct: 112 SASVTSVNFSPDGSTL-ASGSDDKSIRLWDV-KTGQQKAQLDGHTKTVYSVCFSPDGTNL 169
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+G+D ++LW+ + KGH + + + S G L GS N + ++DV+ G
Sbjct: 170 ASGSDKSIRLWDAKTGQQKAKLKGHSTSVSSINFS--PDGTTLASGSYDNSIRLWDVKTG 227
Query: 309 E 309
+
Sbjct: 228 Q 228
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 110/266 (41%), Gaps = 26/266 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+++ + F P + A+G IR +++K+ + + K +
Sbjct: 405 SETVYSVNFSPDGTTLASGSEDNSIRFWDVKTGQQKAKLDGHSNWVKSVQF--------- 455
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
T G L SG D + +D++ + + D H +V SV + +L ASG
Sbjct: 456 ------STDGLTLASGSSDKSIHLWDVKTGQQLAKLDGHT-DQVKSVQFCPDGTIL-ASG 507
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D +++ WD + + + + V V F P G L+ +G DK +D +
Sbjct: 508 SSDKSIRFWDIKTE----QQLAKLDGHTNEVNSVCFSPDGI-LLVSGSQDKSIRIWDAKT 562
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
++ G++ V + F D TL + D ++LW+V + GH N N V
Sbjct: 563 GQQKAKLY-GYKMIVYSVYFSPDGTTLASGSNDKSIRLWDVKTGKQFAKLDGHSNCFNSV 621
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVR 306
S G + GS+ + + ++D+R
Sbjct: 622 CFS--PDGTTVASGSDDSSIRLWDIR 645
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 34/195 (17%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + ++F P ++ A+G + IR ++IK+ + + + H+ + +P
Sbjct: 489 TDQVKSVQFCPDGTILASGSSDKSIRFWDIKT---EQQLAKLDGHTNEVNSVCFSP---- 541
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDL---EKKVPIFERDEHGGRR--VWSVDYSKGDPV 156
G +L SG D + +D ++K ++ G + V+SV +S
Sbjct: 542 --------DGILLVSGSQDKSIRIWDAKTGQQKAKLY------GYKMIVYSVYFSPDGTT 587
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGS+D ++++WD + G + S ++VC F P G++ VA+G D
Sbjct: 588 L-ASGSNDKSIRLWDVKT-GKQFAKLDGHSNCFNSVC---FSPDGTT-VASGSDDSSIRL 641
Query: 217 YDVR--KMVDPVLVF 229
+D+R K + P +F
Sbjct: 642 WDIRTVKEIQPKYIF 656
>gi|115440313|ref|NP_001044436.1| Os01g0780400 [Oryza sativa Japonica Group]
gi|53792220|dbj|BAD52853.1| katanin p80 (WD40-containing) subunit B 1-like protein [Oryza
sativa Japonica Group]
gi|113533967|dbj|BAF06350.1| Os01g0780400 [Oryza sativa Japonica Group]
Length = 838
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 23/248 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RV +G D V + + K+ P+ H G V +V++ + VL +GS +G++++
Sbjct: 29 SSRVFITGGSDRKVNLWAIGKQTPLLSLSGHTGS-VEAVEFDTAE-VLVLAGSSNGSIKL 86
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V ++ + RS+ VEFHPFG A+G +D +D++K + +
Sbjct: 87 WD--LEEAKVVRSL--TGHRSSCTSVEFHPFGE-FFASGSSDTDLKIWDIKKK-GCIHTY 140
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GHR + IRF D +VT G D +K+W++ +++ +K H +
Sbjct: 141 KGHRGAIRTIRFTPDGRWVVTGGEDNIVKVWDLTAGKLLHDFKFHSGQIRCIDFHPQEF- 199
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS V +D + FE + +AG E V S + G+ TL G
Sbjct: 200 -LLATGSADRTVKFWD--------LETFELIGSAGPEATGVRSTVFHPDGK---TLFC-G 246
Query: 349 SDGLLHVF 356
D L VF
Sbjct: 247 LDQSLKVF 254
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSLKWK 106
+EF P FA+G ++I++IK K C + Y + ++++
Sbjct: 108 VEFHPFGEFFASGSSDTDLKIWDIK--------------KKGCIHTYKGHRGAIRTIRFT 153
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + +G D +V +DL + + H G ++ +D+ + +L A+GS D T
Sbjct: 154 P--DGRWVVTGGEDNIVKVWDLTAGKLLHDFKFHSG-QIRCIDFHPQEFLL-ATGSADRT 209
Query: 167 MQMWDPRCDGGKCVSTVQPSAS--RSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
++ WD + + + + P A+ RS V FHP G +L K ++++
Sbjct: 210 VKFWD--LETFELIGSAGPEATGVRSTV----FHPDGKTLFCGLDQSLKVFSWE 257
>gi|440680926|ref|YP_007155721.1| WD-40 repeat-containing protein [Anabaena cylindrica PCC 7122]
gi|428678045|gb|AFZ56811.1| WD-40 repeat-containing protein [Anabaena cylindrica PCC 7122]
Length = 1186
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 35/293 (11%)
Query: 23 WDFNLR------TTVSSSSSPNAAVSDSIGVIE---FDPSDSVFATGGIARKIRIYNIKS 73
W +LR T + ++ + ++++G I F P+ + ATG ++R+Y +
Sbjct: 530 WQADLRNVNLHNTNFACANLAKSVFAETLGGIHSVAFSPNGKLLATGDTNGEVRLYQVAD 589
Query: 74 VLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVP 133
++ DH+ I +P +G+V+ SG D + +D+
Sbjct: 590 ---GKQLLICKDHTGWVWPVIFSP------------NGQVIASGSDDNTIKLWDVNSGQC 634
Query: 134 IFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
+ H G +WS+ +S D ++ ASGS+D T+++WD + +C+ T + + V
Sbjct: 635 LHTLRGHSGS-IWSLTFS-SDGLILASGSEDTTVKVWDIVTN--QCLQTFKTLGGQ--VW 688
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGT 252
V F P + ++A G D+ +DV V GH + V + F D L +
Sbjct: 689 SVAFSP-DNHIIATGNDDQTIKLWDVNTS-KCCQVLQGHTRRVQSVVFHPDGKILASTSH 746
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
D ++LW++++ + + T++GH + N + S R G L S+ V ++DV
Sbjct: 747 DQTVRLWSIDNGKCLDTFQGHTDLVNSIAFS--RDGSNLATASDDQTVILWDV 797
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 11/196 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+GR+L S D +V +D+ F+ RVWSV +S L ASGS D +++
Sbjct: 913 NGRILASASEDQIVRLWDM-ITAKCFQTLRGHTHRVWSVAFSPDGQTL-ASGSQDQMVRL 970
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD GKC+ T+ R V V F P G +L A+G D+ +DV + +
Sbjct: 971 WD--IGTGKCLKTLHGHTHR--VWSVAFSPGGQTL-ASGSHDQTVKLWDVSTG-NCIATL 1024
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
H V + F D TL + D +KLW+V+ + + T GH V S G
Sbjct: 1025 KQHTDWVWSVTFSADGQTLASGSGDRTVKLWDVSTGKCLGTLAGHHQGVYSVVFSA--DG 1082
Query: 289 GLLGCGSETNQVFVYD 304
L GS V ++D
Sbjct: 1083 QTLASGSGDQTVKLWD 1098
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G+ L SG D +V +D+ + + HG RVWSV +S G L ASGS D T+++
Sbjct: 956 GQTLASGSQDQMVRLWDIGTGKCL--KTLHGHTHRVWSVAFSPGGQTL-ASGSHDQTVKL 1012
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD G C++T++ V V F G +L A+G D+ +DV +
Sbjct: 1013 WD--VSTGNCIATLKQHTD--WVWSVTFSADGQTL-ASGSGDRTVKLWDVSTG-KCLGTL 1066
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V + F D TL + D +KLW+ + + +T GH V S
Sbjct: 1067 AGHHQGVYSVVFSADGQTLASGSGDQTVKLWDFSTDKCTKTLVGHTKWVWSVAFS--PDD 1124
Query: 289 GLLGCGSETNQVFVYDVRWGE 309
+L SE + ++DV+ GE
Sbjct: 1125 QILVSASEDATIRLWDVKSGE 1145
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 34/267 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + + ATG + I++++ V+ SK C ++ S+ + P
Sbjct: 690 VAFSPDNHIIATGNDDQTIKLWD-------------VNTSKCCQVLQGHTRRVQSVVFHP 736
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G++L S +D V + ++ + H V S+ +S+ L A+ SDD T+
Sbjct: 737 --DGKILASTSHDQTVRLWSIDNGKCLDTFQGHTDL-VNSIAFSRDGSNL-ATASDDQTV 792
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+WD +C++ + +R V V F P +VA+ D+ +DV K +
Sbjct: 793 ILWD--VSTSQCLNILHGHDTR--VWSVAFSP-DKQMVASASDDQTVRLWDV-KTGRCLR 846
Query: 228 VFDGHRKTVTYIRFLDVDTLVTA---------GTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V G + I F V T+ A D L LW+ N + ++T++GH +
Sbjct: 847 VIQGRTSGIWSIAFSPVRTVPLAEFGYIFASGSNDQTLSLWDANTGKRLKTWRGHSSRVT 906
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDV 305
V +S +G +L SE V ++D+
Sbjct: 907 SVAIS--PNGRILASASEDQIVRLWDM 931
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 16/172 (9%)
Query: 145 VWSVDYSKGDPV-------LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEF 197
+WS+ +S V + ASGS+D T+ +WD + GK + T + +SR V V
Sbjct: 855 IWSIAFSPVRTVPLAEFGYIFASGSNDQTLSLWD--ANTGKRLKTWRGHSSR--VTSVAI 910
Query: 198 HPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCL 256
P G ++A+ D+ +D+ GH V + F D TL + D +
Sbjct: 911 SPNGR-ILASASEDQIVRLWDM-ITAKCFQTLRGHTHRVWSVAFSPDGQTLASGSQDQMV 968
Query: 257 KLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+LW++ + ++T GH + V S G L GS V ++DV G
Sbjct: 969 RLWDIGTGKCLKTLHGHTHRVWSVAFS--PGGQTLASGSHDQTVKLWDVSTG 1018
>gi|449541686|gb|EMD32669.1| hypothetical protein CERSUDRAFT_99405 [Ceriporiopsis subvermispora B]
Length = 1339
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
RV+SVD S D L SGSDD T+++WD + G+ ++ + + S V CV F
Sbjct: 1009 RVFSVDVSY-DAKLVVSGSDDSTIRLWD--VESGQNLAVYRHN---SWVHCVRFSAKADR 1062
Query: 204 LVAAGCADKKAYAYDVR-KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
LV+ G +D +D+ + D V + GH + + +RF ++ T+ T+ DG + LWN
Sbjct: 1063 LVS-GSSDNTVRVWDLAVRTTDEVHI--GHSQWIACVRFSPNMKTVATSSKDGLINLWNT 1119
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ R+IRT KGH + G+S G L G ET+ + +++V G+ V
Sbjct: 1120 ANGRIIRTLKGHKDGVQ--GVSFSSDGRYLASGGETDGLIIWEVESGDVV 1167
>gi|374855889|dbj|BAL58744.1| hypothetical conserved protein [uncultured candidate division OP1
bacterium]
Length = 940
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD T + S S+ ++ S + F P + A+G + K++++ + S V
Sbjct: 680 WDVAKGTEIRSFSAQSSVYS-----VAFSPDGRLLASGCASYKVKLWEVSS---GREVRT 731
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H+ + +P G++L SG YD + +D+ H
Sbjct: 732 LGGHTSWVNSVAFSP------------DGKLLASGSYDDTIKLWDVATGEETMTLTGHT- 778
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V+SV +S +L ASGS D T+++W+ G + ++ S S V + F P G
Sbjct: 779 SGVYSVAFSPQSNLLLASGSLDTTIKLWN-VATGTEALTL---SGHASGVNAIAFSPDGR 834
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNV 261
L+A+G D+ +DV + + GH + + F L+ +G+ D +KLW+V
Sbjct: 835 -LLASGAGDRVVKLWDVATGKE-LHTLAGHTSAIYAVAFSPDGKLLASGSYDATIKLWDV 892
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+ + T GH N N V S G LL GS N V +++V
Sbjct: 893 ATGKEVHTIYGHTNYINSVAFS--PDGRLLASGSADNTVKLWNV 934
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P + A+G + I+++N + + + HS + +P
Sbjct: 484 TDQVTAVAFSPDGTYLASGSMDNTIKLWNAAT---GAEIRTLRGHSGPVNSVAFSP---- 536
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G++L SG D V +++ I H V SV +S L ASG
Sbjct: 537 --------DGKLLASGSSDSSVKIWEVTTGREIRSLTGHF-STVTSVAFSPNGQFL-ASG 586
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T ++W G+ V T+Q S V V F S L+A+G AD ++V
Sbjct: 587 SADNTAKLW--ATASGQEVRTLQ--GHTSWVTSVAFSS-DSKLLASGSADHTTKLWEVAS 641
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ ++ GH TV + F D L + +D KLW+V IR++ +
Sbjct: 642 GREVKIIAAGHSSTVFSVAFSPDGKLLASGSSDDTAKLWDVAKGTEIRSFSAQ---SSVY 698
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ G LL G + +V +++V G V
Sbjct: 699 SVAFSPDGRLLASGCASYKVKLWEVSSGREV 729
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 121/297 (40%), Gaps = 45/297 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS-------VLVDH--PVVAVVDHS----------- 87
I F P++ + A IRI++I S +L +H V AV S
Sbjct: 404 IAFSPNEKLLAAAYADGSIRIWDIPSESLVPRCILTNHFADVNAVAFSSDGKWLASGSRD 463
Query: 88 ---KVCDYYICTPAK--------LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFE 136
K+ + C+ + ++++ + P G L SG D + ++ I
Sbjct: 464 RTIKLWEVITCSEVRSLRGHTDQVTAVAFSP--DGTYLASGSMDNTIKLWNAATGAEIRT 521
Query: 137 RDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVE 196
H G V SV +S D L ASGS D ++++W+ G+ + ++ + S V V
Sbjct: 522 LRGHSG-PVNSVAFSP-DGKLLASGSSDSSVKIWE--VTTGREIRSL--TGHFSTVTSVA 575
Query: 197 FHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGC 255
F P G +A+G AD A + + V GH VT + F L+ +G+ D
Sbjct: 576 FSPNG-QFLASGSADNTAKLWATASGQE-VRTLQGHTSWVTSVAFSSDSKLLASGSADHT 633
Query: 256 LKLWNVNDSRVIRTY-KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
KLW V R ++ GH + V S G LL GS + ++DV G +
Sbjct: 634 TKLWEVASGREVKIIAAGHSSTVFSVAFS--PDGKLLASGSSDDTAKLWDVAKGTEI 688
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
+L + DG+V + + + G +V + +S + +L A+ +D G++++WD
Sbjct: 369 LLATASTDGLVKLWKVATGRQVGVVRSARGSKVNGIAFSPNEKLLAAAYAD-GSIRIWDI 427
Query: 173 RCDG--GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ +C+ T + V V F G L A+G D+ ++V + V
Sbjct: 428 PSESLVPRCILTNH----FADVNAVAFSSDGKWL-ASGSRDRTIKLWEVITCSE-VRSLR 481
Query: 231 GHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH VT + F T + +G+ D +KLWN IRT +GH N V S G
Sbjct: 482 GHTDQVTAVAFSPDGTYLASGSMDNTIKLWNAATGAEIRTLRGHSGPVNSVAFS--PDGK 539
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
LL GS + V +++V G +
Sbjct: 540 LLASGSSDSSVKIWEVTTGREI 561
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 27/273 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD++ + F P D + AT ++++ + + V VV ++ +K++
Sbjct: 355 SDTVNSVAFSPDDLLLATASTDGLVKLWKVAT----GRQVGVVRSAR--------GSKVN 402
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDL--EKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ + P ++L + DG + +D+ E VP H V +V +S L A
Sbjct: 403 GIAFSPNE--KLLAAAYADGSIRIWDIPSESLVPRCILTNHFAD-VNAVAFSSDGKWL-A 458
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++W+ C V V F P G+ L A+G D ++
Sbjct: 459 SGSRDRTIKLWEVIT----CSEVRSLRGHTDQVTAVAFSPDGTYL-ASGSMDNTIKLWNA 513
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + GH V + F D L + +D +K+W V R IR+ GH +
Sbjct: 514 ATGAE-IRTLRGHSGPVNSVAFSPDGKLLASGSSDSSVKIWEVTTGREIRSLTGHFSTVT 572
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V S +G L GS N ++ G+ V
Sbjct: 573 SVAFS--PNGQFLASGSADNTAKLWATASGQEV 603
>gi|390347299|ref|XP_001198210.2| PREDICTED: katanin p80 WD40-containing subunit B1-like
[Strongylocentrotus purpuratus]
Length = 630
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 23/248 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRV+ +G D V + + K+ I H V SV ++ + ++ A GS GTM++
Sbjct: 28 SGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSP-VDSVKFNSSEELVVA-GSQSGTMKI 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
+D + K V T+ + R+++ C++FHP+G VA+G D +DVR+ + +
Sbjct: 86 YD--LEPAKIVRTL--TGHRNSIRCMDFHPYGE-FVASGSTDTNVKLWDVRRK-GCIYTY 139
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V I+F D LVTA D +KLW++ ++ + +K H G+ +
Sbjct: 140 KGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTG--GVTGIEFHPNE 197
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS V +D + F+ V++ V S+ + G + +
Sbjct: 198 FLLASGSSDRTVQFWD--------LETFQLVSSTSPGASAVRSISFHPDG----SYLFCS 245
Query: 349 SDGLLHVF 356
S +LH F
Sbjct: 246 SQDMLHAF 253
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 29/189 (15%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLS 101
+SI ++F P A+G +++++++ K C Y Y +++
Sbjct: 102 NSIRCMDFHPYGEFVASGSTDTNVKLWDVRR--------------KGCIYTYKGHSDQVN 147
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+K+ P G+ L + D + +DL E H G V +++ + +L ASG
Sbjct: 148 MIKFSP--DGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGG-VTGIEFHPNEFLL-ASG 203
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+Q WD + + VS+ P AS AV + FHP GS L + A+ +
Sbjct: 204 SSDRTVQFWD--LETFQLVSSTSPGAS--AVRSISFHPDGSYLFCSSQDMLHAFGW---- 255
Query: 222 MVDPVLVFD 230
+P+ FD
Sbjct: 256 --EPIRCFD 262
>gi|260816181|ref|XP_002602850.1| hypothetical protein BRAFLDRAFT_128944 [Branchiostoma floridae]
gi|229288163|gb|EEN58862.1| hypothetical protein BRAFLDRAFT_128944 [Branchiostoma floridae]
Length = 610
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 23/248 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRV+ +G D V + + K I H V V + + ++ A GS G++++
Sbjct: 29 SGRVMVTGGEDKKVNMWAVGKPNCIMSLSGHTSP-VECVRFGNAEELVVA-GSQSGSLKI 86
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + +S + ++FHP+G VA+G D +DVR+ + +
Sbjct: 87 WD--LEAAKIVRTL--TGHKSNIRSLDFHPYGE-FVASGSMDTNIKLWDVRRK-GCIFTY 140
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V IRF D + +AG D LK+W++ ++I+ +K H G+ +
Sbjct: 141 KGHTDAVNCIRFSPDGRWIASAGEDSSLKMWDLTAGKMIQEFKDHTG--PVTGVEFHPNE 198
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS V +D + F+ V++ G+E G + + + G+ + GG
Sbjct: 199 FLLASGSADRTVKFWD--------LETFQLVSSTGAESGAIRCIFFHPDGK----CLFGG 246
Query: 349 SDGLLHVF 356
S L VF
Sbjct: 247 SQDALRVF 254
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVT 249
S V C+ ++ G DKK + V K + ++ GH V +RF + + LV
Sbjct: 18 SNVNCLALGYKSGRVMVTGGEDKKVNMWAVGK-PNCIMSLSGHTSPVECVRFGNAEELVV 76
Query: 250 AGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
AG+ G LK+W++ ++++RT GH N L +G + GS + ++DVR
Sbjct: 77 AGSQSGSLKIWDLEAAKIVRTLTGH--KSNIRSLDFHPYGEFVASGSMDTNIKLWDVR 132
>gi|242816729|ref|XP_002486804.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218713269|gb|EED12693.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1185
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 37/310 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+S+ + F S A+G R I+++N+K+ + + HS + ++
Sbjct: 807 SESVNSVTFSSDGSTLASGSHDRTIKLWNVKT---GQELQTLTGHSDL----------IN 853
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + + G L SG D + +D++ H G V SV +S L ASG
Sbjct: 854 SVAFS--SDGLTLASGSDDRTIKLWDVKTGQEPQTLTGHSG-WVNSVVFSSDGSTL-ASG 909
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD T+++WD + G+ + T+ + +V V F G +L A+G +D+ ++V K
Sbjct: 910 SDDQTIKLWDVKT--GQELQTL--TGHSESVNSVAFSSDGLTL-ASGSSDQTVKLWNV-K 963
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ GH V + F D TL + D +KLW+V + ++T GH + N V
Sbjct: 964 TGQELQTLTGHLSWVRSVAFSSDGSTLASGSDDQTIKLWDVKTGQELQTLTGHSDLINSV 1023
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S G L GS + ++DV+ G+ E T G G+V SV + D
Sbjct: 1024 AFS--SDGSTLASGSIDKTIILWDVKTGQ-------ELQTLTG-HLGWVRSVAF---SSD 1070
Query: 341 ECTLVAGGSD 350
TL +G SD
Sbjct: 1071 GSTLASGSSD 1080
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 96/369 (26%), Positives = 151/369 (40%), Gaps = 64/369 (17%)
Query: 10 PQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIY 69
PQ E T W NL+T S S N+ S G+ A+G + I+++
Sbjct: 580 PQVEAT-------WSSNLQTLTGHSESVNSVAFSSDGL--------TLASGSSDQTIKLW 624
Query: 70 NIKS-----VLVDHP-----VVAVVDHSKVCD---------YYICTPAKLSSLKWKP--- 107
N+K+ L H V D S + + + T +L +L
Sbjct: 625 NVKTGQELQTLTGHSGWVRSVAFSSDGSTLASGSYDQTIKLWDVKTGQELQTLTGHSDLI 684
Query: 108 -----GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ G L SG YD + +D++ + H V SV +S L ASGS
Sbjct: 685 NSVAFSSDGSTLASGSYDKTIKLWDMKTGQELQTLTGHS-ESVNSVAFSFDGSTL-ASGS 742
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+++W+ + G+ + T+ + + V F F S +A+G +DV K
Sbjct: 743 HDRTIKLWNVKT--GQELQTL--TGHSDLINSVAF-SFDGSTLASGSHYGTIKLWDV-KT 796
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ GH ++V + F D TL + D +KLWNV + ++T GH + N V
Sbjct: 797 GQELQTLTGHSESVNSVTFSSDGSTLASGSHDRTIKLWNVKTGQELQTLTGHSDLINSVA 856
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
S G L GS+ + ++DV+ G+ EP T G G+V+SV + D
Sbjct: 857 FS--SDGLTLASGSDDRTIKLWDVKTGQ-------EPQTLTG-HSGWVNSVVF---SSDG 903
Query: 342 CTLVAGGSD 350
TL +G D
Sbjct: 904 STLASGSDD 912
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 37/310 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+S+ + F S A+G R I+++N+K+ + + HS + ++
Sbjct: 723 SESVNSVAFSFDGSTLASGSHDRTIKLWNVKT---GQELQTLTGHSDL----------IN 769
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + G L SG + G + +D++ + H V SV +S L ASG
Sbjct: 770 SVAFS--FDGSTLASGSHYGTIKLWDVKTGQELQTLTGH-SESVNSVTFSSDGSTL-ASG 825
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ + G+ + T+ + + V F G +L A+G D+ +DV+
Sbjct: 826 SHDRTIKLWNVKT--GQELQTL--TGHSDLINSVAFSSDGLTL-ASGSDDRTIKLWDVKT 880
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+P GH V + F D TL + D +KLW+V + ++T GH + N V
Sbjct: 881 GQEP-QTLTGHSGWVNSVVFSSDGSTLASGSDDQTIKLWDVKTGQELQTLTGHSESVNSV 939
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S G L GS V +++V+ G+ + + +T S +V SV + D
Sbjct: 940 AFS--SDGLTLASGSSDQTVKLWNVKTGQ-----ELQTLTGHLS---WVRSVAF---SSD 986
Query: 341 ECTLVAGGSD 350
TL +G D
Sbjct: 987 GSTLASGSDD 996
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 36/277 (12%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDS--IGVIEFDPSDSVFATGGIARKIRIY 69
A +++R WD V + P S + + F S A+G + I+++
Sbjct: 865 ASGSDDRTIKLWD------VKTGQEPQTLTGHSGWVNSVVFSSDGSTLASGSDDQTIKLW 918
Query: 70 NIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE 129
++K+ + + HS+ ++S+ + + G L SG D V ++++
Sbjct: 919 DVKT---GQELQTLTGHSE----------SVNSVAFS--SDGLTLASGSSDQTVKLWNVK 963
Query: 130 KKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSA 187
E G W SV +S L ASGSDD T+++WD + G+ + T+ +
Sbjct: 964 TGQ---ELQTLTGHLSWVRSVAFSSDGSTL-ASGSDDQTIKLWDVKT--GQELQTL--TG 1015
Query: 188 SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
+ V F GS+L A+G DK +DV K + GH V + F D T
Sbjct: 1016 HSDLINSVAFSSDGSTL-ASGSIDKTIILWDV-KTGQELQTLTGHLGWVRSVAFSSDGST 1073
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
L + +D +KLWNV + ++T GH ++ V S
Sbjct: 1074 LASGSSDKTIKLWNVKTGQELQTLTGHSDSERSVAFS 1110
>gi|291230364|ref|XP_002735136.1| PREDICTED: katanin p80 subunit-like [Saccoglossus kowalevskii]
Length = 666
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 30/268 (11%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ A ++ L P SGRV+ +G D V + + K I H V SV +
Sbjct: 13 FVAHSANVNCLALGP-KSGRVMVTGGEDKKVNMWAVGKPNCIMSLSGHTSP-VESVRFGN 70
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ ++ A+GS GT+++WD + K V T+ + +S++ ++FHP+G VA+G D
Sbjct: 71 TEELV-AAGSQSGTIKIWD--LEAAKIVRTL--TGHKSSIQTLDFHPYGE-FVASGSFDT 124
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+DVR+ + + GH + +RF D + +AG DG KLW++ ++I +K
Sbjct: 125 NVKLWDVRRK-GCIYTYRGHTNRINSVRFSPDGRWVASAGEDGLAKLWDLAAGKLINEFK 183
Query: 272 GH---VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGF 328
H VNN F + LL GS V +D+ +F V E
Sbjct: 184 HHTGPVNNIEF-----HPNEFLLATGSADRTVKFWDLE--------NFNLVGTTDKEASP 230
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ + + + G L +GG D LHV+
Sbjct: 231 IRCILFHQDGN---VLFSGGQDS-LHVY 254
>gi|348685865|gb|EGZ25680.1| hypothetical protein PHYSODRAFT_312032 [Phytophthora sojae]
Length = 1015
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 24/241 (9%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRR-VWSVDYSKGDPVLGA 159
++W P S +L + +G V+ ++LE++ + ER +G RR V + + D +
Sbjct: 70 IRWHP-QSDYLLATAATNGAVVIWNLEREGYKHVQERVLNGHRRSVNRICWHTTDWNVLI 128
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS DGT+++WD R GGK VST QP + +V V PF + AA + +D+
Sbjct: 129 SGSQDGTVKLWDKR--GGKVVSTYQPKS--ESVRDVRASPFHPNKFAAAFENGIVQVWDM 184
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
RK P L F H+ V I + D + L + G D +K+W + D +R K +
Sbjct: 185 RKNSQPELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVKIWELGD---VRQPKQTIQTI 241
Query: 278 NFVGLSVWRHGGLLGCGSET----NQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVC 333
VG WR + + N + V+D + F PV + S +
Sbjct: 242 ASVGRVAWRPTCVTHIATSASLMDNSIHVWDTK-------RPFIPVASMKGHSDIASGIS 294
Query: 334 W 334
W
Sbjct: 295 W 295
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 17/168 (10%)
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVR----KMVDPVLVFDGHRKTVTYI--RFLDVDTLV 248
+ +HP L+A + +++ K V V +GHR++V I D + L+
Sbjct: 70 IRWHPQSDYLLATAATNGAVVIWNLEREGYKHVQE-RVLNGHRRSVNRICWHTTDWNVLI 128
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ DG +KLW+ +V+ TY+ + V S + H E V V+D+R
Sbjct: 129 SGSQDGTVKLWDKRGGKVVSTYQPKSESVRDVRASPF-HPNKFAAAFENGIVQVWDMR-- 185
Query: 309 EPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ +P + +G V S+ W D L +GG D + ++
Sbjct: 186 -----KNSQPELKFTAHKGLVLSIDWHPT--DANVLASGGRDRYVKIW 226
>gi|145509352|ref|XP_001440616.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407841|emb|CAK73219.1| unnamed protein product [Paramecium tetraurelia]
Length = 1876
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 26/278 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S ++ + F P + A+G IR++++K+ + HS DY +
Sbjct: 1469 SGTVQSVHFSPDGTTLASGSDDNSIRLWDVKT---GQQKAKLDGHS---DY-------VR 1515
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G L SG YD ++ +D++K + D H RV SV++S D + ASG
Sbjct: 1516 SVNFSP--DGTTLASGSYDNTIILWDIKKGQQKAKLDGHSD-RVLSVNFSP-DGITLASG 1571
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++++W+ + K + V V F P G +L A+G D +DV+
Sbjct: 1572 SQDKSIRLWNIKTRQQK----AKLDGHSDRVLSVNFSPDGITL-ASGSQDNSIRVWDVKT 1626
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + +GH V + F D TL + D ++LW++ + GH + V
Sbjct: 1627 GIQKAKL-NGHSDRVLSVNFSPDGTTLASGSYDNTIRLWDIKKGQQKAKLDGHSSIVWAV 1685
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
S G + S+ N + ++DV+ G+ + D P
Sbjct: 1686 NFS--PDGTTIASCSDDNSIRLWDVKTGQQIEKLDGHP 1721
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 38/289 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + + F P A+G + IR++NIK+ + HS ++
Sbjct: 1553 SDRVLSVNFSPDGITLASGSQDKSIRLWNIKT---RQQKAKLDGHSD----------RVL 1599
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G L SG D + +D++ + + + H RV SV++S L ASG
Sbjct: 1600 SVNFSP--DGITLASGSQDNSIRVWDVKTGIQKAKLNGHSD-RVLSVNFSPDGTTL-ASG 1655
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA-YDVR 220
S D T+++WD + K + S V V F P G+++ A C+D + +DV
Sbjct: 1656 SYDNTIRLWDIK----KGQQKAKLDGHSSIVWAVNFSPDGTTI--ASCSDDNSIRLWDV- 1708
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNF 279
K + DGH + V + F T + +G+ D ++LW+V + GH
Sbjct: 1709 KTGQQIEKLDGHPREVMSVIFSPNGTTLASGSADKSIRLWDVKTGQQKAKLGGHSGIIYS 1768
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
V S G L GS N + ++DV+ G+ VW +F P
Sbjct: 1769 VNFS--PDGTTLASGSRDNSICLWDVKTGQQKAKLDGHSQIVWSVNFSP 1815
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 63/240 (26%), Positives = 97/240 (40%), Gaps = 34/240 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL- 100
SD + + F P + A+G IR+++IK K AKL
Sbjct: 1637 SDRVLSVNFSPDGTTLASGSYDNTIRLWDIKK-----------GQQK---------AKLD 1676
Query: 101 --SSLKWKPGTS--GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
SS+ W S G + S D + +D++ I + D H R V SV +S
Sbjct: 1677 GHSSIVWAVNFSPDGTTIASCSDDNSIRLWDVKTGQQIEKLDGHP-REVMSVIFSPNGTT 1735
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGS D ++++WD + K + + V F P G++L A+G D
Sbjct: 1736 L-ASGSADKSIRLWDVKTGQQK----AKLGGHSGIIYSVNFSPDGTTL-ASGSRDNSICL 1789
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+DV K DGH + V + F D L + D ++LW++ + GH N
Sbjct: 1790 WDV-KTGQQKAKLDGHSQIVWSVNFSPDGSKLASCSDDQSIRLWDIKTGQQKAKLDGHSN 1848
>gi|443648973|ref|ZP_21130155.1| WD domain, G-beta repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|443335086|gb|ELS49569.1| WD domain, G-beta repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 1247
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 66/271 (24%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++++S V+ ++ YY +++
Sbjct: 919 TDWICSVAFSPDGKTLISGSGDQTIRLWSVES----GEVIQILQEK----YYWVLLYQVA 970
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+G+++ S +D ++ +D++ EH +RVWS+ +S +L SG
Sbjct: 971 V-----SANGQLIASTSHDNIIKLWDIKTDEKYTFAPEHQ-KRVWSIAFSPNSQIL-VSG 1023
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F G L+A G D+ + +
Sbjct: 1024 SGDNSVKLWSVPR---GFCLKTFE--EHQAWVLSVNFSLDGK-LIATGSEDRTIKLWSIE 1077
Query: 221 K-MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +K+W V D R+I +++GH +
Sbjct: 1078 DDMTQSLRTFKGHQGRIWSVVFSSDGQRLASSSDDQTVKVWQVKDGRLINSFEGHKSWVW 1137
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV G+
Sbjct: 1138 SVAFS--PDGKLLASGGDDATIRIWDVETGQ 1166
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 23/232 (9%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 628 LLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIIKIW 686
Query: 171 DPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D C S PS A S +A G DK + V + + +
Sbjct: 687 SITTDLSINCHSLPHPSQKHHAPIRAVAFSADSKFLATGSEDKTIKIWSV-ETGECLHTL 745
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH++ V + F L+ +G+ D +K+W+V+ + + T GH + V S G
Sbjct: 746 EGHQERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQDWVWQVAFS--SDG 803
Query: 289 GLLGCGSETNQVFVYDVRWGEP------------VWVHDFEP---VTAAGSE 325
LL GS + ++ + GE +W F P A+GSE
Sbjct: 804 QLLASGSGDKTIKIWSIIEGEYQNIDTLEGHESWIWSIAFSPDGQYIASGSE 855
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 59/290 (20%), Positives = 119/290 (41%), Gaps = 38/290 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ +G + F P+ + A+G + I+I+++ + H + D
Sbjct: 750 ERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQD----------------- 792
Query: 103 LKWKPGTS--GRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W+ S G++L SG D + + +E + + E +WS+ +S D A
Sbjct: 793 WVWQVAFSSDGQLLASGSGDKTIKIWSIIEGEYQNIDTLEGHESWIWSIAFSP-DGQYIA 851
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+D T+++W + +C+ +R + + F P S + +G D+ + +
Sbjct: 852 SGSEDFTLRLWSVKTR--ECLQCFGGYGNR--LSSITFSP-DSQYILSGSIDRSIRLWSI 906
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + +GH + + F D TL++ D ++LW+V VI+ +
Sbjct: 907 KNH-KCLQQINGHTDWICSVAFSPDGKTLISGSGDQTIRLWSVESGEVIQILQEKYYWVL 965
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
++V +G L+ S N + ++D++ E VW F P
Sbjct: 966 LYQVAVSANGQLIASTSHDNIIKLWDIKTDEKYTFAPEHQKRVWSIAFSP 1015
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQM 169
G+++ +G D + + +E + R G + R+WSV +S L AS SDD T+++
Sbjct: 1059 GKLIATGSEDRTIKLWSIEDDMTQSLRTFKGHQGRIWSVVFSSDGQRL-ASSSDDQTVKV 1117
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + G+ +++ + +S V V F P G L+A+G D +DV L+
Sbjct: 1118 W--QVKDGRLINSFE--GHKSWVWSVAFSPDGK-LLASGGDDATIRIWDVETGQLHQLLC 1172
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN 260
H K+V + F + +TL +A D +KLWN
Sbjct: 1173 Q-HTKSVRSVCFSPNGNTLASASEDETIKLWN 1203
>gi|428299395|ref|YP_007137701.1| YD repeat protein [Calothrix sp. PCC 6303]
gi|428235939|gb|AFZ01729.1| YD repeat protein [Calothrix sp. PCC 6303]
Length = 1139
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 75/322 (23%), Positives = 139/322 (43%), Gaps = 43/322 (13%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ I F P + A+G I+++ + LV ++ H+ +SS+
Sbjct: 577 SVNTITFSPDGQIIASGDEGGNIKLWRLNGTLVK-----IIKHT--------NNGSVSSI 623
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P G+++ SG D + ++L + I H V +V++S ++ ASGSD
Sbjct: 624 SFSP--DGKIIASGSNDNTIKLWNLNGTL-IKTLIGHKA-SVRTVNFSPNGKII-ASGSD 678
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++W+ G + T+ SR V V F P G+ + + + K + +
Sbjct: 679 DTTIKLWNL---DGTLIKTINGDKSR--VYTVSFSPNGNYIASGSGNNVKLWELNGTL-- 731
Query: 224 DPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVN-DSRVIRTYKGHVNNRNFVG 281
+ GH +TV I F D ++ +A D +KLW +N D +I T GH + + +
Sbjct: 732 --IQTMTGHSETVNSIAFSPNDKIIASASGDKTIKLWKLNGDGDLITTLNGHTD--SILS 787
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
LS R G + GSE + +W + +P+ ++ SV + G+
Sbjct: 788 LSFSRDGKAIASGSEDKTI---------KLWQLEPKPIIRVNGHNSWIESVSFSPNGK-- 836
Query: 342 CTLVAGGSDGLLHVFVGKKKPL 363
+ +G DG + ++ P+
Sbjct: 837 -IIASGSGDGKIKLWQPDGTPI 857
Score = 46.6 bits (109), Expect = 0.021, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 111/273 (40%), Gaps = 42/273 (15%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYICTPAKL 100
S+++ I F P+D + A+ + I+++ + D ++ ++ H+
Sbjct: 739 SETVNSIAFSPNDKIIASASGDKTIKLWKLNG---DGDLITTLNGHTD------------ 783
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S L G+ + SG D + + LE K PI + H + SV +S ++ AS
Sbjct: 784 SILSLSFSRDGKAIASGSEDKTIKLWQLEPK-PIIRVNGHNSW-IESVSFSPNGKII-AS 840
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV---AAGCADKKAYAY 217
GS DG +++W P DG + V V F P G L +G
Sbjct: 841 GSGDGKIKLWQP--DGTPIKIIIN---GDKPVTNVSFSPDGKILAFIDDSGTLKLWQNGK 895
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
++ + DP + +T I F D TL+++ +D LKLW D ++++ NN
Sbjct: 896 IIKIIKDP-------KSEITSISFSPDSKTLISSSSDYTLKLWR-TDGKLLKNLTR--NN 945
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+S G GS + Y ++ G+
Sbjct: 946 SGITSVSFSPDGKSFAFGSSDD----YKIKLGK 974
Score = 40.8 bits (94), Expect = 0.96, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 134 IFERDEHGGRR--VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
I E+++ G + V +V +S D L ASGSDD T+++W G+ + T+ S+
Sbjct: 525 ISEKNQLEGHQKPVRTVSFSP-DGRLIASGSDDRTIKLWQ---RDGRLIKTINHG---SS 577
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
V + F P G ++A+G + + + ++ + +V+ I F ++ +G
Sbjct: 578 VNTITFSPDG-QIIASGDEGGNIKLWRLNGTLVKIIKHT-NNGSVSSISFSPDGKIIASG 635
Query: 252 T-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+ D +KLWN+N + +I+T GH + V S +G ++ GS+ + ++++
Sbjct: 636 SNDNTIKLWNLNGT-LIKTLIGHKASVRTVNFS--PNGKIIASGSDDTTIKLWNL 687
>gi|158340170|ref|YP_001521340.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158310411|gb|ABW32026.1| WD-repeat protein [Acaryochloris marina MBIC11017]
Length = 1292
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 28/274 (10%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIA--RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICT 96
A +D+I I F P + V A+G + IR++++++ H + H K
Sbjct: 1005 AGHTDAIRAIAFSPLEQVIASGSSTNDKTIRLWDVQTGQCKHILSG---HDK-------- 1053
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+ SL + P G++L S D V +D +K V + H +WSV +S + +
Sbjct: 1054 --GIWSLAFHP--KGKILASCGSDQTVKLWDTQKGVCLTTFQGHN-HWIWSVAFSPKEEI 1108
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L A+GS D ++++W+ + + KC++T+ + S V V F P G+ ++A+G D A
Sbjct: 1109 L-ATGSFDCSIKLWNIQSE--KCLNTL--NGHSSCVSSVAFCPNGT-ILASGSFDHTAIL 1162
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+D+ + +GH + + F D L TA D ++LW V+ + +R +GH N
Sbjct: 1163 WDLNTN-QYIHKLEGHSHPIWDMDFSPDGQLLATASVDHTVRLWKVDTGQCLRILEGHTN 1221
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G LL S+ + +++V G+
Sbjct: 1222 --AIFSASFSFDGQLLVTSSQDETIKIWNVSMGK 1253
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 42/301 (13%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ I F P D + A G + KIR+++ ++ + + H+ + +P
Sbjct: 662 SVHSIAFSPDDQMIAAGDVNGKIRLFDSEN---GQHLRTITGHTSWVQSIVFSP------ 712
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+G ++ SG D +M +D+EK + H V+S+++S L SGSD
Sbjct: 713 ------TGNLIASGSPDQTIMIWDVEKGENLKLLTGH-TNVVYSINFSPDGQQL-VSGSD 764
Query: 164 DGTMQMWDPRCDGGKCVSTVQPS-ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DGT+++W+ + G+C + S +RS F P G +L A G AD +D++
Sbjct: 765 DGTVRLWNSQ--SGQCHKIFKYSHGARSTA----FSPDGQNL-AIGYADGTIRIWDIKSG 817
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ + + GH V I + D L +A D +KLWNV + T GH N +
Sbjct: 818 L-CLKAWSGHEGWVWSITYSPDGQALASASDDETIKLWNVINGACTSTLVGHSNALRCIV 876
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVR-------------WGEPVWVHDFEPVTAAGSERGF 328
S G L G + + ++D+R W V ++ + A+GSE G
Sbjct: 877 FS--PSGDYLISGGADHLIKIWDIRTTQCLKTLFGHTNWVWSVAINSTQRTIASGSEDGS 934
Query: 329 V 329
+
Sbjct: 935 I 935
>gi|307109866|gb|EFN58103.1| hypothetical protein CHLNCDRAFT_20357 [Chlorella variabilis]
Length = 454
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+L + + P GR LG+ +D +D+E + E++ H R V++V + + D L
Sbjct: 245 RLGRIAFHP--MGRHLGTASFDQTWRLWDVETGSCLLEQEGHS-RSVYAVAF-QDDGALA 300
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASG D ++WD C G+ + T Q AV ++F P G L+A G D A +D
Sbjct: 301 ASGGMDAIARVWD--CRTGRNIFTCQGHVK--AVLSLDFSPSGY-LLATGSEDNTARVWD 355
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDT--LVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+RK + + GH ++ +RF D L+TAG D +LW R++RT GH
Sbjct: 356 LRKRA-VLSILPGHTSLISQVRFEPNDGRYLLTAGYDNTSRLWGGRSFRLLRTLAGH 411
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASG+ D T ++W GK + T+ + R + + FHP G L A D+ +D
Sbjct: 218 ASGATDATAKLWSGE---GKLLRTLVGHSDR--LGRIAFHPMGRHLGTASF-DQTWRLWD 271
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
V + +L +GH ++V + F D L + G D ++W+ R I T +GHV +
Sbjct: 272 V-ETGSCLLEQEGHSRSVYAVAFQDDGALAASGGMDAIARVWDCRTGRNIFTCQGHV--K 328
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ L G LL GSE N V+D+R
Sbjct: 329 AVLSLDFSPSGYLLATGSEDNTARVWDLR 357
>gi|162456674|ref|YP_001619041.1| WD repeat-containing protein [Sorangium cellulosum So ce56]
gi|161167256|emb|CAN98561.1| WD-repeat protein [Sorangium cellulosum So ce56]
Length = 1759
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVL 157
++S+ + PG GR L SG +D V +++E + + + E H V SV +S L
Sbjct: 1401 VTSVAFSPG--GRTLASGSHDTNVRLWEVESGRALRVLESHSH---HVMSVAFSPDGRTL 1455
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+++W+ + G+ +ST+ AV V F P G ++A+G D +
Sbjct: 1456 -ASGSHDTTVRLWE--VESGRALSTL--GGHVKAVTSVVFSPDGR-MLASGSNDTTVRLW 1509
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+V + VF+GH K T + F D TL + D ++LW V RV+RT+ GH
Sbjct: 1510 EVESG-RALRVFEGHGKAATSVVFSPDGRTLASGSNDTTVRLWEVESGRVLRTFGGHGKV 1568
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHD 315
V S G L GS V +++V G + V +
Sbjct: 1569 VTSVVFSP--DGRTLASGSNDTTVRLWEVESGRALLVFE 1605
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 111/264 (42%), Gaps = 30/264 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G +R++ ++S + + H K + +P
Sbjct: 1446 VAFSPDGRTLASGSHDTTVRLWEVES---GRALSTLGGHVKAVTSVVFSP---------- 1492
Query: 108 GTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
GR+L SG D V +++E + + +FE G+ SV +S L ASGS+D
Sbjct: 1493 --DGRMLASGSNDTTVRLWEVESGRALRVFEGH---GKAATSVVFSPDGRTL-ASGSNDT 1546
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++W+ + G+ + T V V F P G +L A+G D ++V
Sbjct: 1547 TVRLWE--VESGRVLRTF--GGHGKVVTSVVFSPDGRTL-ASGSNDTTVRLWEVESG-RA 1600
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+LVF+ H K T + F D TL + D ++LW R + +GH V +S
Sbjct: 1601 LLVFEDHGKGATSVAFSPDGRTLASGSYDTMVRLWEAGSGRFLGALRGHTA--PVVSVSF 1658
Query: 285 WRHGGLLGCGSETNQVFVYDVRWG 308
G LL S + ++ V G
Sbjct: 1659 SPDGTLLASASSDGTLRLWRVATG 1682
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 112/267 (41%), Gaps = 31/267 (11%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P A+G R +R++ ++S H + H + + +P
Sbjct: 1197 FSPDGRTLASGA-GRAMRLWKVES---GHVLRVFEGHGNWVNSVVFSP------------ 1240
Query: 110 SGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR L S D V +++E + + +FE G V SV + L ASGS D T+
Sbjct: 1241 DGRTLASASDDMTVRLWEVESGRALRVFEGH---GLMVTSVAFRPDGRTL-ASGSRDMTV 1296
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ + G+ + ++ +R V V F P G +L A+G D ++V +
Sbjct: 1297 RLWE--VESGQVLRVIEGHGAR--VNSVVFSPDGLTL-ASGSNDTSVRLWEVDSG-QVLR 1350
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
VF+ H V + F D TL D ++LW V RV+RT GH V S
Sbjct: 1351 VFESHGHDVMSVAFSPDGRTLALEPNDTTVRLWEVESGRVLRTLGGHGKAVTSVAFSP-- 1408
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWV 313
G L GS V +++V G + V
Sbjct: 1409 GGRTLASGSHDTNVRLWEVESGRALRV 1435
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 27/275 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+ S + ++PS + ATG +R++++ S + + H + +P
Sbjct: 1105 ASSCNAVAWNPSGDLLATGHGDGSVRLWDVVS---GRAIRGIAGHLGPVNSVAFSP---- 1157
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
GR L SG D VM + +E + D H G V SV +S L ASG
Sbjct: 1158 --------DGRTLASGSDDSSVMLWKVESGRVLRVFDGH-GVGVRSVVFSPDGRTL-ASG 1207
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+ M++W + + G + + + V V F P G +L +A D ++V
Sbjct: 1208 AGR-AMRLW--KVESGHVLRVFEGHG--NWVNSVVFSPDGRTLASA-SDDMTVRLWEVES 1261
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ VF+GH VT + F D TL + D ++LW V +V+R +GH N V
Sbjct: 1262 G-RALRVFEGHGLMVTSVAFRPDGRTLASGSRDMTVRLWEVESGQVLRVIEGHGARVNSV 1320
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHD 315
S G L GS V +++V G+ + V +
Sbjct: 1321 VFSP--DGLTLASGSNDTSVRLWEVDSGQVLRVFE 1353
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 19/194 (9%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L A+G DG++++WD G+ + + + V V F P G +L A+G D
Sbjct: 1119 LLATGHGDGSVRLWD--VVSGRAIRGI--AGHLGPVNSVAFSPDGRTL-ASGSDDSSVML 1173
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+ V + VFDGH V + F + +G ++LW V V+R ++GH N
Sbjct: 1174 WKVESG-RVLRVFDGHGVGVRSVVFSPDGRTLASGAGRAMRLWKVESGHVLRVFEGHGNW 1232
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRR 336
N V S G L S+ V +++V G + V + + V+SV +R
Sbjct: 1233 VNSVVFSP--DGRTLASASDDMTVRLWEVESGRALRVFEGHGL--------MVTSVAFR- 1281
Query: 337 VGEDECTLVAGGSD 350
D TL +G D
Sbjct: 1282 --PDGRTLASGSRD 1293
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 24/219 (10%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + A+G +R++ ++S + H K + +P
Sbjct: 1490 FSPDGRMLASGSNDTTVRLWEVES---GRALRVFEGHGKAATSVVFSP------------ 1534
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
GR L SG D V +++E + HG + V SV +S L ASGS+D T+++
Sbjct: 1535 DGRTLASGSNDTTVRLWEVESGRVLRTFGGHG-KVVTSVVFSPDGRTL-ASGSNDTTVRL 1592
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W+ + G+ + + V F P G +L A+G D ++ +
Sbjct: 1593 WE--VESGRALLVFEDHGK--GATSVAFSPDGRTL-ASGSYDTMVRLWEAGSG-RFLGAL 1646
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVI 267
GH V + F D L +A +DG L+LW V R +
Sbjct: 1647 RGHTAPVVSVSFSPDGTLLASASSDGTLRLWRVATGRCL 1685
>gi|145542750|ref|XP_001457062.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424876|emb|CAK89665.1| unnamed protein product [Paramecium tetraurelia]
Length = 2818
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 28/257 (10%)
Query: 53 SDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGR 112
SDS A G IR++++++ H V HS +K++++ + P G
Sbjct: 2423 SDSTLACGSDDMSIRLWDVRTGQQQH-----VGHS----------SKVNTVCFSP--DGT 2465
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
L SG D + +D++ + D H R V+SV++S L ASGS D ++++WD
Sbjct: 2466 TLASGSSDNSIRLWDVKTGQQKAKLDGHS-REVYSVNFSPDGTTL-ASGSRDNSIRLWDV 2523
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
+ + + V F P G++L A+G D +DV+ V + DGH
Sbjct: 2524 KTG----LQKAKLDGHSYYVTSFNFSPDGTTL-ASGSYDNSIRLWDVKTRQQKVKL-DGH 2577
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
V I F D TL + D ++LW+V + GH NN N + S L
Sbjct: 2578 SNNVNSICFSPDSTTLASGSDDFSIRLWDVKTGQQKAKLDGHSNNVNSICFS--PDSITL 2635
Query: 292 GCGSETNQVFVYDVRWG 308
GS+ + ++DV+ G
Sbjct: 2636 ASGSDDYSICLWDVKTG 2652
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 75/317 (23%), Positives = 125/317 (39%), Gaps = 54/317 (17%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD V + + S + + F P + A+G IR++++K+
Sbjct: 2439 WD------VRTGQQQHVGHSSKVNTVCFSPDGTTLASGSSDNSIRLWDVKT---GQQKAK 2489
Query: 83 VVDHSKVCDYYICTP-------------------------AKL-------SSLKWKPGTS 110
+ HS+ +P AKL +S + P
Sbjct: 2490 LDGHSREVYSVNFSPDGTTLASGSRDNSIRLWDVKTGLQKAKLDGHSYYVTSFNFSP--D 2547
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG YD + +D++ + + D H V S+ +S L ASGSDD ++++W
Sbjct: 2548 GTTLASGSYDNSIRLWDVKTRQQKVKLDGH-SNNVNSICFSPDSTTL-ASGSDDFSIRLW 2605
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G + S + +++C F P S +A+G D +DV+ + D
Sbjct: 2606 DVKT-GQQKAKLDGHSNNVNSIC---FSP-DSITLASGSDDYSICLWDVKTGYQKAKL-D 2659
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH + V + F D TL ++ D ++LW+V + GH V S G
Sbjct: 2660 GHSREVHSVNFSPDGTTLASSSYDTSIRLWDVKTRQQKAKLDGHSEAVYSVNFS--PDGT 2717
Query: 290 LLGCGSETNQVFVYDVR 306
L GS N + ++DVR
Sbjct: 2718 TLASGSNDNSIRLWDVR 2734
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 67/272 (24%), Positives = 110/272 (40%), Gaps = 60/272 (22%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYICTPAKL 100
S + + F P + A+G IR++++K+ L A +D HS YY+
Sbjct: 2494 SREVYSVNFSPDGTTLASGSRDNSIRLWDVKTGLQK----AKLDGHS----YYV------ 2539
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
+S + P G L SG YD + +D++ + + D H V S+ +S L AS
Sbjct: 2540 TSFNFSP--DGTTLASGSYDNSIRLWDVKTRQQKVKLDGHSNN-VNSICFSPDSTTL-AS 2595
Query: 161 GSDDGTMQMWD-------PRCDGGK------CVS----TVQPSASRSAVC---------- 193
GSDD ++++WD + DG C S T+ + ++C
Sbjct: 2596 GSDDFSIRLWDVKTGQQKAKLDGHSNNVNSICFSPDSITLASGSDDYSICLWDVKTGYQK 2655
Query: 194 -----------CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL 242
V F P G++L A+ D +DV+ + DGH + V + F
Sbjct: 2656 AKLDGHSREVHSVNFSPDGTTL-ASSSYDTSIRLWDVKTRQQKAKL-DGHSEAVYSVNFS 2713
Query: 243 -DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
D TL + D ++LW+V + GH
Sbjct: 2714 PDGTTLASGSNDNSIRLWDVRTRQQKAKLDGH 2745
Score = 41.2 bits (95), Expect = 0.70, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G +L SG D + +D++ + D H R V SV++S L ASGS D ++++W
Sbjct: 2157 GTILASGSGDKSIRLWDIKTGQQKAKLDGHS-REVHSVNFSPDGTTL-ASGSYDQSIRLW 2214
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
D + + V+ SA V F P G++L A C ++ +
Sbjct: 2215 DVKTG----LQKVKLDGYSSADYSVNFSPDGTTLSVAMCGGEQEF 2255
Score = 38.1 bits (87), Expect = 6.5, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVT 249
S VC F P G++L A +K + ++V + D H + I F TL
Sbjct: 2374 SLVC---FSPEGTTLAFASEEYQKIWLWNVTTEQQKG-ILDCHSGKILSICFSSDSTLAC 2429
Query: 250 AGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
D ++LW+V + + + GH + N V S G L GS N + ++DV+ G+
Sbjct: 2430 GSDDMSIRLWDVRTGQ--QQHVGHSSKVNTVCFS--PDGTTLASGSSDNSIRLWDVKTGQ 2485
>gi|297597537|ref|NP_001044115.2| Os01g0725800 [Oryza sativa Japonica Group]
gi|57899731|dbj|BAD87451.1| Cop1 protein-like [Oryza sativa Japonica Group]
gi|215678883|dbj|BAG95320.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673643|dbj|BAF06029.2| Os01g0725800 [Oryza sativa Japonica Group]
Length = 628
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 18/135 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH-----PVVAVVDHSKVCDYYICT 96
S+ + + FD FAT G+ +KI+++ ++ +H PVV + + SK
Sbjct: 492 SNLVCSVGFDRDKEFFATAGVNKKIKVFEYNMIVNEHCDIHYPVVEMSNRSK-------- 543
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W + S D++G+V +D+ + E EH RRVWSVD+S DP
Sbjct: 544 ---LSCICWNSYMKSHI-ASSDFEGIVQVWDVTRSQVFVEMREHE-RRVWSVDFSLADPT 598
Query: 157 LGASGSDDGTMQMWD 171
SGSDDG++++W+
Sbjct: 599 KLVSGSDDGSVKLWN 613
>gi|425471992|ref|ZP_18850843.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 9701]
gi|389882009|emb|CCI37472.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 9701]
Length = 1246
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++ +S V+ ++ DY++ L
Sbjct: 918 TDWICSVAFSPDGKTLISGSGDQTIRLWSGES----GKVIKILQEK---DYWVL----LH 966
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ P +G+++ S +D + +D+ EH +RVWS+ +S +L SG
Sbjct: 967 QVAVSP--NGQLIASTSHDNTIKLWDIRTDEKYTFSPEHQ-KRVWSIAFSPNSQML-VSG 1022
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F G L+A G D+ + +
Sbjct: 1023 SGDNSVKLWSVPR---GFCLKTFE--EHQAWVLSVNFSLDGK-LIATGSEDRTIKLWSIE 1076
Query: 221 -KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +K+W V D R+I +++GH +
Sbjct: 1077 DNMTQSLRTFKGHQGRIWSVVFSPDGQRLASSSDDQTVKVWQVKDGRLINSFEGHKSWVW 1136
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV GE
Sbjct: 1137 SVAFS--PDGKLLASGGDDATIRIWDVETGE 1165
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 23/232 (9%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 627 LLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIVKIW 685
Query: 171 DPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D C S PS A S +A G DK + V + + +
Sbjct: 686 SITTDLSINCHSLPHPSQKHHAPIRAVTFSADSQFLATGSEDKTIKIWSV-ETGECLHTL 744
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH++ V + F L+ +G+ D +K+W+V+ + T GH + V S G
Sbjct: 745 EGHQERVGGVAFSPNGQLLASGSADKTIKIWSVDTGECLHTLTGHQDWVWQVAFS--SDG 802
Query: 289 GLLGCGSETNQVFVYDVRWGEP------------VWVHDFEP---VTAAGSE 325
LL GS + ++ + GE +W F P A+GSE
Sbjct: 803 QLLASGSGDKTIKIWSIIEGEYQNIDTLTGHESWIWSVAFSPDGQYIASGSE 854
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQM 169
G+++ +G D + + +E + R G + R+WSV +S L AS SDD T+++
Sbjct: 1058 GKLIATGSEDRTIKLWSIEDNMTQSLRTFKGHQGRIWSVVFSPDGQRL-ASSSDDQTVKV 1116
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + G+ +++ + +S V V F P G L+A+G D +DV L+
Sbjct: 1117 W--QVKDGRLINSFE--GHKSWVWSVAFSPDGK-LLASGGDDATIRIWDVETGELHQLLC 1171
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+ H K+V + F + TL +AG D +KLWN+
Sbjct: 1172 E-HTKSVRSVCFSPNGKTLASAGEDETIKLWNL 1203
Score = 43.5 bits (101), Expect = 0.16, Method: Composition-based stats.
Identities = 58/290 (20%), Positives = 118/290 (40%), Gaps = 38/290 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ +G + F P+ + A+G + I+I+++ + H + D
Sbjct: 749 ERVGGVAFSPNGQLLASGSADKTIKIWSVDTGECLHTLTGHQD----------------- 791
Query: 103 LKWKPGTS--GRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W+ S G++L SG D + + +E + + +WSV +S D A
Sbjct: 792 WVWQVAFSSDGQLLASGSGDKTIKIWSIIEGEYQNIDTLTGHESWIWSVAFSP-DGQYIA 850
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+D T+++W + +C+ + +R + + F S + +G D+ + +
Sbjct: 851 SGSEDFTLRLWSVKTR--ECLQCFRGYGNR--LSSITFST-DSQYILSGSIDRSIRLWSI 905
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + +GH + + F D TL++ D ++LW+ +VI+ +
Sbjct: 906 KNH-KCLQQINGHTDWICSVAFSPDGKTLISGSGDQTIRLWSGESGKVIKILQEKDYWVL 964
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
++V +G L+ S N + ++D+R E VW F P
Sbjct: 965 LHQVAVSPNGQLIASTSHDNTIKLWDIRTDEKYTFSPEHQKRVWSIAFSP 1014
>gi|242054597|ref|XP_002456444.1| hypothetical protein SORBIDRAFT_03g036400 [Sorghum bicolor]
gi|241928419|gb|EES01564.1| hypothetical protein SORBIDRAFT_03g036400 [Sorghum bicolor]
Length = 838
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 115/248 (46%), Gaps = 23/248 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RV +G D V + + K+ P+ H V +V + + VL +GS +G++++
Sbjct: 29 SSRVFITGGNDRKVNLWAIGKQTPLLTLSGHTSA-VEAVQFDSAE-VLVLAGSSNGSIKL 86
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V ++ + RS+ VEFHPFG A+G +D +D++K + +
Sbjct: 87 WD--LEEAKVVRSL--AGHRSSCTAVEFHPFGE-FFASGSSDTDLKIWDIKKK-GCIHTY 140
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GHR + IRF D +VT G D +K+W++ +++ +K H N +
Sbjct: 141 KGHRGAIKTIRFTPDGRWVVTGGEDSIVKVWDLTAGKLLHDFKFHSGQINCIDFHPQEF- 199
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS V +D + FE + ++G E V S+ + G+ TL G
Sbjct: 200 -LLATGSADRTVKFWD--------LETFELIGSSGPEGTSVRSMVFHPDGK---TLFC-G 246
Query: 349 SDGLLHVF 356
D L VF
Sbjct: 247 LDQSLKVF 254
>gi|428298824|ref|YP_007137130.1| WD-40 repeat-containing protein [Calothrix sp. PCC 6303]
gi|428235368|gb|AFZ01158.1| WD-40 repeat-containing protein [Calothrix sp. PCC 6303]
Length = 1200
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG +DG++ D + + D+H G VWSV +S + AS S D ++++W
Sbjct: 627 GQTLASGGHDGLIQLSDTQTGDCLKTLDQHTGI-VWSVSFSPDGQTI-ASASLDTSIRLW 684
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+CV + S+VC V F P GS ++A+ D +D+ K + +
Sbjct: 685 DIYL--GECVKILH--GHTSSVCSVRFSPNGS-ILASSSQDGDIRLWDISKSI-CIKTLA 738
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
GH V ++F D L +A +D +KLW+V+ I+T+ GH N
Sbjct: 739 GHDTRVCSVQFSPDSKILASASSDRSVKLWDVSKGTCIKTFNGHKN 784
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 34/232 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH-SKVCDYYICTPAKLSSLKWK 106
+ F P A+ + IR+++I + V + H S VC S+++
Sbjct: 663 VSFSPDGQTIASASLDTSIRLWDI---YLGECVKILHGHTSSVC-----------SVRFS 708
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P +G +L S DG + +D+ K + I H RV SV +S +L AS S D +
Sbjct: 709 P--NGSILASSSQDGDIRLWDISKSICIKTLAGHD-TRVCSVQFSPDSKIL-ASASSDRS 764
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR----KM 222
+++WD G C+ T + ++ V + F P G ++ A +Y Y VR ++
Sbjct: 765 VKLWD--VSKGTCIKTF--NGHKNEVWSLCFSPDGQTVATA------SYDYSVRLWNVEL 814
Query: 223 VDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ +F GH V I F LD LV+A D +++W+VN +R +GH
Sbjct: 815 GTCIKIFQGHTSEVYSIIFSLDGQNLVSASKDSSVRIWDVNTGVCLRNLQGH 866
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
VL +G DG+V +D+ H VWSV +S + AS SDD ++++WD
Sbjct: 889 VLATGSSDGLVRLWDVASGYCTKVLQGHVDW-VWSVSFSPDGRTI-ASSSDDKSIKLWD- 945
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
G C++ + V + F P G +L A+ DK +D+ + + H
Sbjct: 946 -VISGDCITNLY--GHSGGVTSISFSPDGRTL-ASASRDKSVKLWDIHEH-KCIKTLVAH 1000
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
+ + + F D D L T D +KLW+V++ + I T GH N LS G +L
Sbjct: 1001 TEPIWSVSFSPDGDILATGSDDYLIKLWDVSEGKSITTLSGHTN--GVWSLSFSPDGKML 1058
Query: 292 GCGSETNQVFVYD 304
GS + + ++D
Sbjct: 1059 ASGSVDHSIRLWD 1071
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 19/229 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR + S D + +D+ I H G V S+ +S L AS S D ++++W
Sbjct: 929 GRTIASSSDDKSIKLWDVISGDCITNLYGHSGG-VTSISFSPDGRTL-ASASRDKSVKLW 986
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D KC+ T+ A + V F P G ++A G D +DV + +
Sbjct: 987 D--IHEHKCIKTL--VAHTEPIWSVSFSPDGD-ILATGSDDYLIKLWDVSEG-KSITTLS 1040
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D L + D ++LW+ ++ ++ +GH + V S G
Sbjct: 1041 GHTNGVWSLSFSPDGKMLASGSVDHSIRLWDTSNFACVKVLQGHTSTVWSVSFS--PDGS 1098
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
L S + ++D +F + V SVC+ VG
Sbjct: 1099 TLASASSDQTIRLWDTS--------NFTCFKVLHTHGSGVCSVCFNSVG 1139
>gi|159028494|emb|CAO87301.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1165
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 66/271 (24%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++++S V+ ++ YY +++
Sbjct: 837 TDWICSVAFSPDGKTLISGSGDQTIRLWSVES----GEVIQILQEK----YYWVLLYQVA 888
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+G+++ S +D ++ +D++ EH +RVWS+ +S +L SG
Sbjct: 889 V-----SANGQLIASTSHDNIIKLWDIKTDEKYTFAPEHQ-KRVWSIAFSPNSQIL-VSG 941
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F G L+A G D+ + +
Sbjct: 942 SGDNSVKLWSVPR---GFCLKTFE--EHQAWVLSVNFSLDGK-LIATGSEDRTIKLWSIE 995
Query: 221 K-MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +K+W V D R+I +++GH +
Sbjct: 996 DDMTQSLRTFKGHQGRIWSVVFSSDGQRLASSSDDQTVKVWQVKDGRLINSFEGHKSWVW 1055
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV G+
Sbjct: 1056 SVAFS--PDGKLLASGGDDATIRIWDVETGQ 1084
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 23/232 (9%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 546 LLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIIKIW 604
Query: 171 DPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D C S PS A S +A G DK + V + + +
Sbjct: 605 SITTDLSINCHSLPHPSQKHHAPIRAVAFSADSKFLATGSEDKTIKIWSV-ETGECLHTL 663
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH++ V + F L+ +G+ D +K+W+V+ + + T GH + V S G
Sbjct: 664 EGHQERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQDWVWQVAFS--SDG 721
Query: 289 GLLGCGSETNQVFVYDVRWGEP------------VWVHDFEP---VTAAGSE 325
LL GS + ++ + GE +W F P A+GSE
Sbjct: 722 QLLASGSGDKTIKIWSIIEGEYQNIDTLEGHESWIWSIAFSPDGQYIASGSE 773
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 59/290 (20%), Positives = 119/290 (41%), Gaps = 38/290 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ +G + F P+ + A+G + I+I+++ + H + D
Sbjct: 668 ERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQD----------------- 710
Query: 103 LKWKPGTS--GRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W+ S G++L SG D + + +E + + E +WS+ +S D A
Sbjct: 711 WVWQVAFSSDGQLLASGSGDKTIKIWSIIEGEYQNIDTLEGHESWIWSIAFSP-DGQYIA 769
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+D T+++W + +C+ +R + + F P S + +G D+ + +
Sbjct: 770 SGSEDFTLRLWSVKTR--ECLQCFGGYGNR--LSSITFSP-DSQYILSGSIDRSIRLWSI 824
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + +GH + + F D TL++ D ++LW+V VI+ +
Sbjct: 825 KNH-KCLQQINGHTDWICSVAFSPDGKTLISGSGDQTIRLWSVESGEVIQILQEKYYWVL 883
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
++V +G L+ S N + ++D++ E VW F P
Sbjct: 884 LYQVAVSANGQLIASTSHDNIIKLWDIKTDEKYTFAPEHQKRVWSIAFSP 933
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQM 169
G+++ +G D + + +E + R G + R+WSV +S L AS SDD T+++
Sbjct: 977 GKLIATGSEDRTIKLWSIEDDMTQSLRTFKGHQGRIWSVVFSSDGQRL-ASSSDDQTVKV 1035
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + G+ +++ + +S V V F P G L+A+G D +DV L+
Sbjct: 1036 W--QVKDGRLINSFE--GHKSWVWSVAFSPDGK-LLASGGDDATIRIWDVETGQLHQLLC 1090
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN 260
H K+V + F + +TL +A D +KLWN
Sbjct: 1091 Q-HTKSVRSVCFSPNGNTLASASEDETIKLWN 1121
>gi|434391327|ref|YP_007126274.1| (Myosin heavy-chain) kinase [Gloeocapsa sp. PCC 7428]
gi|428263168|gb|AFZ29114.1| (Myosin heavy-chain) kinase [Gloeocapsa sp. PCC 7428]
Length = 1207
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 77/328 (23%), Positives = 143/328 (43%), Gaps = 35/328 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P + A+G R +R+++IK+ + H D + + +
Sbjct: 643 TDRVFSVAFSPDGRMLASGSEDRLVRVWDIKTGELLHTFAGHTDEVRSVAF--------A 694
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ G +L SG +DG V ++++ + EH ++VWSV +S ++ ASG
Sbjct: 695 PQHYAHSHHGGLLASGSFDGTVRVWNIDTG-ECLKLAEH-QQKVWSVAFSPDGSII-ASG 751
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD R G + T+ +A + V F G +L A+G D+ ++
Sbjct: 752 SSDRTIKLWDVRT--GTSIKTI--TAHSQQIRTVAFSGDGQTL-ASGSDDQSVRIWNYHT 806
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + V GH ++ + F L+ + + D ++LW+ ++ ++T +GH N V
Sbjct: 807 G-EVLRVLKGHTSWISTVAFSPNHYLLASSSEDRSVRLWDSRNNFCLKTLQGHSNGVWCV 865
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP---VTAAGSERG 327
S G L GS+ + ++D G+ +W F P V A+GSE
Sbjct: 866 AFS--PDGTQLASGSQDRLIRLWDTTTGKHLGSLQGHTSWIWSVAFHPEGNVLASGSEDR 923
Query: 328 FVSSVCWRRVGEDECTLVAGGSDGLLHV 355
+ W T + G +D + V
Sbjct: 924 TIR--LWDTQTRQHLTTLKGHADAVFAV 949
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 64/284 (22%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P +V A+G R IR+++ ++ + + H+ I +P
Sbjct: 907 VAFHPEGNVLASGSEDRTIRLWDTQT---RQHLTTLKGHADAVFAVIFSP---------- 953
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG DG + ++++++ + GG VWS+ S D L ASGS D T+
Sbjct: 954 --DGKTLFSGSLDGTIRLWNIQQQTCHPWQGHRGG--VWSIALSL-DGTLLASGSQDQTI 1008
Query: 168 QMWDPR---------------------CD-------------------GGKCVSTVQPSA 187
++WD + CD G+C+ T+Q A
Sbjct: 1009 KLWDVQTGCCIKTLSGHTSWIRACAISCDRQYLVSGSADGVIKVWQIETGQCIQTLQ--A 1066
Query: 188 SRSAVCCVEFHPFGSSLVAAGC-ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
+ V + F P G + G A K + + + L GH K V ++ +
Sbjct: 1067 HQGPVLSIVFDPSGENFATCGTDAVIKLWQWHPTCTISKTL--HGHSKWVRFLAYNSDGL 1124
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
L + D +KLWN N R + T+K R + G+++ GL
Sbjct: 1125 LASCSQDETIKLWNFNGDRNL-THKTLQVPRPYEGMNITDAQGL 1167
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 114/269 (42%), Gaps = 33/269 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I + F P+ + A+ R +R+++ ++ ++ + T S+
Sbjct: 820 ISTVAFSPNHYLLASSSEDRSVRLWDSRN-----------------NFCLKTLQGHSNGV 862
Query: 105 WKPGTS--GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W S G L SG D ++ +D + H +WSV + VL ASGS
Sbjct: 863 WCVAFSPDGTQLASGSQDRLIRLWDTTTGKHLGSLQGHTSW-IWSVAFHPEGNVL-ASGS 920
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
+D T+++WD + + ++T++ A AV V F P G +L + G D +++++
Sbjct: 921 EDRTIRLWDTQTR--QHLTTLKGHAD--AVFAVIFSPDGKTLFS-GSLDGTIRLWNIQQQ 975
Query: 223 V-DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
P + GHR V I LD L + D +KLW+V I+T GH +
Sbjct: 976 TCHP---WQGHRGGVWSIALSLDGTLLASGSQDQTIKLWDVQTGCCIKTLSGHTSWIRAC 1032
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+S R L GS + V+ + G+
Sbjct: 1033 AISCDRQ--YLVSGSADGVIKVWQIETGQ 1059
>gi|17230958|ref|NP_487506.1| hypothetical protein alr3466 [Nostoc sp. PCC 7120]
gi|20532311|sp|Q8YRI1.1|YY46_ANASP RecName: Full=Uncharacterized WD repeat-containing protein alr3466
gi|17132599|dbj|BAB75165.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
Length = 1526
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 142/302 (47%), Gaps = 38/302 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P ++ A+GG + +R+++I S + + + ++ + + +P
Sbjct: 1082 FSPDGAMLASGGDDQIVRLWDISS---GNCLYTLQGYTSWVRFLVFSP------------ 1126
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G L +G D +V +D+ K ++ H V +V +S L ASGS D T+++
Sbjct: 1127 NGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNW-VNAVAFSPDGATL-ASGSGDQTVRL 1184
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD KC+ +Q S V V F+P GS+L A+G +D+ +++ + F
Sbjct: 1185 WD--ISSSKCLYILQ--GHTSWVNSVVFNPDGSTL-ASGSSDQTVRLWEINSS-KCLCTF 1238
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V + F D L + +D ++LW+++ S+ + T++GH N N V + G
Sbjct: 1239 QGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFN--PDG 1296
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
+L GS V ++++ +H F+ T+ +VSSV + G T++A G
Sbjct: 1297 SMLASGSGDQTVRLWEI--SSSKCLHTFQGHTS------WVSSVTFSPDG----TMLASG 1344
Query: 349 SD 350
SD
Sbjct: 1345 SD 1346
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 22/247 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++ +GD G+V ++ + H V SV +S+ +L ASGSDD T+++W
Sbjct: 876 GKLFATGDSGGIVRFWEAATGKELLTCKGHNSW-VNSVGFSQDGKML-ASGSDDQTVRLW 933
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+C+ T + SR V V F P S ++A+G +D+ +D+ + + +F
Sbjct: 934 D--ISSGQCLKTFKGHTSR--VRSVVFSP-NSLMLASGSSDQTVRLWDISSG-ECLYIFQ 987
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F LD L T D ++LW+++ S+ ++GH + V S G
Sbjct: 988 GHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFS--SDGA 1045
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
+L GS+ V ++D+ G ++ + +G S V D L +GG
Sbjct: 1046 MLASGSDDQTVRLWDISSGNCLY-----------TLQGHTSCVRSVVFSPDGAMLASGGD 1094
Query: 350 DGLLHVF 356
D ++ ++
Sbjct: 1095 DQIVRLW 1101
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 30/270 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F+P S+ A+G + +R+++I S SK + ++S+
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISS-------------SKCLHTFQGHTNWVNSVA 1291
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGS 162
+ P S GSGD + E K + F+ G W SV +S D + ASGS
Sbjct: 1292 FNPDGSMLASGSGDQTVRLWEISSSKCLHTFQ-----GHTSWVSSVTFSP-DGTMLASGS 1345
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD T+++W G+C+ T + V V F P G+ ++A+G D+ + +
Sbjct: 1346 DDQTVRLWS--ISSGECLYTFL--GHTNWVGSVIFSPDGA-ILASGSGDQTVRLWSISSG 1400
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ GH V I F TL+ +G+D ++LWN++ + T GH+N+ V
Sbjct: 1401 -KCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVA 1459
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G +L GS+ + ++DV+ GE +
Sbjct: 1460 FS--SDGLILASGSDDETIKLWDVKTGECI 1487
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 44/310 (14%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P + A+G + +R+++I S SK + ++S+
Sbjct: 1161 VNAVAFSPDGATLASGSGDQTVRLWDISS-------------SKCLYILQGHTSWVNSVV 1207
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGS 162
+ P S GS D + E + K + F+ G W SV ++ +L ASGS
Sbjct: 1208 FNPDGSTLASGSSDQTVRLWEINSSKCLCTFQ-----GHTSWVNSVVFNPDGSML-ASGS 1261
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+++WD KC+ T Q + V V F+P G S++A+G D+ +++
Sbjct: 1262 SDKTVRLWD--ISSSKCLHTFQ--GHTNWVNSVAFNPDG-SMLASGSGDQTVRLWEISSS 1316
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ F GH V+ + F T++ +G+ D ++LW+++ + T+ GH N+VG
Sbjct: 1317 -KCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHT---NWVG 1372
Query: 282 LSVWR-HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
++ G +L GS V ++ + G+ ++ T G +V S+ + G
Sbjct: 1373 SVIFSPDGAILASGSGDQTVRLWSISSGKCLY-------TLQG-HNNWVGSIVFSPDG-- 1422
Query: 341 ECTLVAGGSD 350
TL+A GSD
Sbjct: 1423 --TLLASGSD 1430
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 30/259 (11%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F ++ A+G + +R+++I S + + + H+ + +P
Sbjct: 1040 FSSDGAMLASGSDDQTVRLWDISS---GNCLYTLQGHTSCVRSVVFSP------------ 1084
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP--VLGASGSDDGTM 167
G +L SG D +V +D+ ++ G W V + P V A+GS D +
Sbjct: 1085 DGAMLASGGDDQIVRLWDISSGNCLYTLQ---GYTSW-VRFLVFSPNGVTLANGSSDQIV 1140
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD KC+ T+Q + V V F P G++L A+G D+ +D+ +
Sbjct: 1141 RLWD--ISSKKCLYTLQ--GHTNWVNAVAFSPDGATL-ASGSGDQTVRLWDISSS-KCLY 1194
Query: 228 VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+ GH V + F D TL + +D ++LW +N S+ + T++GH + N V +
Sbjct: 1195 ILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFN--P 1252
Query: 287 HGGLLGCGSETNQVFVYDV 305
G +L GS V ++D+
Sbjct: 1253 DGSMLASGSSDKTVRLWDI 1271
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F+P S+ A+G + +R++ I S SK + + +SS+
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISS-------------SKCLHTFQGHTSWVSSVT 1333
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G +L SG D V + + ++ H V SV +S +L ASGS D
Sbjct: 1334 FSP--DGTMLASGSDDQTVRLWSISSGECLYTFLGHTNW-VGSVIFSPDGAIL-ASGSGD 1389
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W GKC+ T+Q + V + F P G+ L+A+G D+ +++ +
Sbjct: 1390 QTVRLWS--ISSGKCLYTLQ--GHNNWVGSIVFSPDGT-LLASGSDDQTVRLWNISSG-E 1443
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDG-CLKLWNVNDSRVIRTYKGH 273
+ GH +V + F ++ +G+D +KLW+V I+T K
Sbjct: 1444 CLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKSE 1493
>gi|422292764|gb|EKU20066.1| Prp8 binding protein, partial [Nannochloropsis gaditana CCMP526]
Length = 356
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 44/299 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F+P ATG + I ++++ ++ V+A H+ + LKW P
Sbjct: 68 LQFNPMGDALATGSFDKTILLWDVYEDCKNYNVLA--GHTNA----------VLDLKWSP 115
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV--LGASGSDDG 165
+G + S D +M +D K I + EH G V SV + GD V L A+ SDD
Sbjct: 116 --NGCQIASASADKTLMLWDSNKGTRIRKCKEHTGC-VNSVAVA-GDKVAALIATASDDR 171
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++WD R +VQ R + V G + A G D +D+ K P
Sbjct: 172 TVKLWDNRSR-----RSVQTIEHRFQLLAVALSADGKKVFAGGI-DNSIQVWDMAKGPAP 225
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN----VNDSRVIRTYKG--HVNNRN 278
+ V +GH +TVT + D L++ D ++ W+ V R+++ ++G H ++RN
Sbjct: 226 LDVLEGHSETVTGLSLSPDGKYLLSNAMDNTVRQWDVRPFVTGGRLVQVFQGGTHGSDRN 285
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW-------------VHDFEPVTAAGS 324
+ + + G ++ GS V V+DV G+ ++ H EPV A+ S
Sbjct: 286 LLRCAWSQDGEMVSAGSADRAVHVWDVPSGQELYYLPGHKGTVNEVVFHPREPVIASAS 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 20/186 (10%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRS---------------AVCCVEFHPFGSSL 204
+G+DD + P G +S+ P+ R+ AV C++F+P G +L
Sbjct: 19 TGADDSALATV-PESSGTLAISSAPPAPGRTSHLAASTMLLTGHAAAVYCLQFNPMGDAL 77
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVND 263
A G DK +DV + V GH V +++ + +A D L LW+ N
Sbjct: 78 -ATGSFDKTILLWDVYEDCKNYNVLAGHTNAVLDLKWSPNGCQIASASADKTLMLWDSNK 136
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV--HDFEPVTA 321
IR K H N V ++ + L+ S+ V ++D R V H F+ +
Sbjct: 137 GTRIRKCKEHTGCVNSVAVAGDKVAALIATASDDRTVKLWDNRSRRSVQTIEHRFQLLAV 196
Query: 322 AGSERG 327
A S G
Sbjct: 197 ALSADG 202
>gi|109128755|ref|XP_001100717.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Macaca mulatta]
Length = 786
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 163 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 220
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 221 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 274
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 275 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 333
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 334 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 381
Query: 349 SDGL 352
D L
Sbjct: 382 QDSL 385
>gi|291571666|dbj|BAI93938.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
platensis NIES-39]
Length = 686
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+ I + P A+G +R++++++ +H + + H + +P
Sbjct: 403 TSQILTVAITPDGQTLASGSHDNTVRLWSLQTF--EH-LSTLTGHGGAINSIAISP---- 455
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
GRV+ SG D V +DL K I H R + ++ +S+ L ASG
Sbjct: 456 --------DGRVIASGSRDNTVKLWDLHSKQEIATLKGHE-RDITTIAFSRDGKTL-ASG 505
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+ +WD + + + T++ V V F P G L+A+ D +D+ +
Sbjct: 506 SRDHTITLWD--LETNELIGTLR--GHNHEVRAVAFSPNGR-LIASASQDNTVKLWDIDR 560
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + H K+V I F D TL + +D LKLW+V VI T GH ++
Sbjct: 561 R-EEISTLLSHDKSVNAIAFSRDGQTLASGSSDHTLKLWDVTTKEVIATLHGH--SQAIK 617
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
L++ G ++ G + + V ++D++ E +
Sbjct: 618 SLALSHDGRIIASGGDDDTVQLWDLKTKEAI 648
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D T+++W + +ST+ + A+ + P G ++A+G D +D
Sbjct: 419 ASGSHDNTVRLWS--LQTFEHLSTL--TGHGGAINSIAISPDGR-VIASGSRDNTVKLWD 473
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + + GH + +T I F D TL + D + LW++ + +I T +GH N
Sbjct: 474 LHSKQE-IATLKGHERDITTIAFSRDGKTLASGSRDHTITLWDLETNELIGTLRGH--NH 530
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
++ +G L+ S+ N V ++D + E ++ S V+++ + R
Sbjct: 531 EVRAVAFSPNGRLIASASQDNTVKLWD--------IDRREEISTLLSHDKSVNAIAFSRD 582
Query: 338 GEDECTLVAGGSDGLLHVF 356
G+ TL +G SD L ++
Sbjct: 583 GQ---TLASGSSDHTLKLW 598
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 11/196 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D + +DLE I H V +V +S ++ AS S D T+++W
Sbjct: 499 GKTLASGSRDHTITLWDLETNELIGTLRGHN-HEVRAVAFSPNGRLI-ASASQDNTVKLW 556
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D D + +ST+ + +V + F G +L A+G +D +DV + +
Sbjct: 557 D--IDRREEISTLL--SHDKSVNAIAFSRDGQTL-ASGSSDHTLKLWDVTTK-EVIATLH 610
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH + + + D + + G D ++LW++ I T +GH + + S R
Sbjct: 611 GHSQAIKSLALSHDGRIIASGGDDDTVQLWDLKTKEAIATLRGHSSKIEAIAFSPKR--P 668
Query: 290 LLGCGSETNQVFVYDV 305
LL GS + ++ +
Sbjct: 669 LLVSGSHNRNLEIWQI 684
>gi|427414996|ref|ZP_18905183.1| WD40 repeat-containing protein [Leptolyngbya sp. PCC 7375]
gi|425755649|gb|EKU96514.1| WD40 repeat-containing protein [Leptolyngbya sp. PCC 7375]
Length = 1166
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 32/266 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++++ + F P + A+GG R I +++I+ D +AV++H P+++
Sbjct: 916 TNTVWSVAFSPKSQLLASGGHDRTIHLWDIQ----DGHRLAVLEH----------PSQVR 961
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP-----V 156
S+ + P G+ L SG D V +D++ + H G VW+V S P +
Sbjct: 962 SVGFSP--DGQTLVSGSSDKHVRLWDVDSGQCLRVMSGHTGM-VWTVACSANTPMSADTL 1018
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ ASGS D T+++WD + G C+ T++ + + V F P G L+A+G ADK
Sbjct: 1019 MIASGSSDKTLRLWDAQT--GDCLKTLE--GHTNWIWSVAFSPQGH-LLASGSADKTVKL 1073
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+DV + GH V + F + L + D +KLW+V ++T +G
Sbjct: 1074 WDVHDG-RCLKTLVGHANVVRSLAFNPQGNYLASVSEDETIKLWDVKTGECLKTLRG--- 1129
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVF 301
+R + G+ + GL T QV
Sbjct: 1130 DRPYEGMDITGARGLTDAQKGTLQVL 1155
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 123/291 (42%), Gaps = 28/291 (9%)
Query: 19 ARCEWDFNLRT--TVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLV 76
A WD ++ VS ++S I F P ATG +R++++++
Sbjct: 681 ASAGWDQRIKIWELVSGECLQTVEDTNSFWSIAFSPDSQTIATGSTDETVRLWDVQT--- 737
Query: 77 DHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFE 136
+ + + S+ + P G+ L SG D + + +++ +
Sbjct: 738 ----------GQCLKTFTGHTHAIRSVAFSP--DGQELVSGGGDQTIKIWHVQEGRCLKT 785
Query: 137 RDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVE 196
HG +WS+ +S L SG +D T+++W P+ G C+ ++ A+ AV +
Sbjct: 786 LSGHG-NWIWSIAFSPDGSTL-VSGGEDQTVRIWQPQT--GHCLKSLTGYAN--AVRAIA 839
Query: 197 FHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGC 255
F P G +L++ G D +D+ + + F GH+ + + D + ++ D
Sbjct: 840 FSPDGQTLIS-GSDDYAVKLWDLERE-RCLKTFIGHKNWILSVAVHPDNGLIASSSADQT 897
Query: 256 LKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+K+W++ +R +RT GH N V S LL G + ++D++
Sbjct: 898 VKIWDIRRNRCVRTLPGHTNTVWSVAFS--PKSQLLASGGHDRTIHLWDIQ 946
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 112 RVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
++L SG +D + +D++ ++ + E +V SV +S L SGS D +++
Sbjct: 929 QLLASGGHDRTIHLWDIQDGHRLAVLEHPS----QVRSVGFSPDGQTL-VSGSSDKHVRL 983
Query: 170 WDPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSS--LVAAGCADKKAYAYDVRKMVDPV 226
WD D G+C+ + V C P + ++A+G +DK +D + D +
Sbjct: 984 WD--VDSGQCLRVMSGHTGMVWTVACSANTPMSADTLMIASGSSDKTLRLWDAQTG-DCL 1040
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+GH + + F L+ +G+ D +KLW+V+D R ++T GH N + +
Sbjct: 1041 KTLEGHTNWIWSVAFSPQGHLLASGSADKTVKLWDVHDGRCLKTLVGHANVVRSLAFN-- 1098
Query: 286 RHGGLLGCGSETNQVFVYDVRWGE 309
G L SE + ++DV+ GE
Sbjct: 1099 PQGNYLASVSEDETIKLWDVKTGE 1122
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 35/270 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++ + I F P + A+ G ++I+I+ + S C +
Sbjct: 665 TNYVQAIAFSPDGHLIASAGWDQRIKIWELVS--------------GECLQTVEDTNSFW 710
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ + P + + + +G D V +D++ + + F H R SV +S L
Sbjct: 711 SIAFSPDS--QTIATGSTDETVRLWDVQTGQCLKTFTGHTHAIR---SVAFSPDGQEL-V 764
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SG D T+++W G+C+ T+ S + + + F P GS+LV+ G D+ +
Sbjct: 765 SGGGDQTIKIW--HVQEGRCLKTL--SGHGNWIWSIAFSPDGSTLVSGG-EDQTVRIWQ- 818
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + G+ V I F D TL++ D +KLW++ R ++T+ GH +N
Sbjct: 819 PQTGHCLKSLTGYANAVRAIAFSPDGQTLISGSDDYAVKLWDLERERCLKTFIGH---KN 875
Query: 279 FVGLSVWRH--GGLLGCGSETNQVFVYDVR 306
++ LSV H GL+ S V ++D+R
Sbjct: 876 WI-LSVAVHPDNGLIASSSADQTVKIWDIR 904
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 26/240 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I + P S+FA G + I+++ + + +H H + D +I S+
Sbjct: 543 IHAVAVSPDGSLFAAAGTSGVIQLWQMANG-EEH------GHCRGHDAWIW------SIA 589
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G+ L SG D V +D+ + H V SV +S D + ASGS D
Sbjct: 590 FSP--DGQWLVSGSADQTVKIWDVHTGCCMHTLPGHT-NWVRSVVFSP-DGKIVASGSSD 645
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++WD G+C++T++ + V + F P G + +AG D++ +++
Sbjct: 646 QTVKLWDLE---GRCLNTLK--GHTNYVQAIAFSPDGHLIASAGW-DQRIKIWELVSGEC 699
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
V D + + I F D T+ T TD ++LW+V + ++T+ GH + V S
Sbjct: 700 LQTVEDTN--SFWSIAFSPDSQTIATGSTDETVRLWDVQTGQCLKTFTGHTHAIRSVAFS 757
>gi|387220083|gb|AFJ69750.1| Prp8 binding protein [Nannochloropsis gaditana CCMP526]
Length = 349
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 44/299 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F+P ATG + I ++++ ++ V+A H+ + LKW P
Sbjct: 61 LQFNPMGDALATGSFDKTILLWDVYEDCKNYNVLA--GHTNA----------VLDLKWSP 108
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV--LGASGSDDG 165
+G + S D +M +D K I + EH G V SV + GD V L A+ SDD
Sbjct: 109 --NGCQIASASADKTLMLWDSNKGTRIRKCKEHTGC-VNSVAVA-GDKVAALIATASDDR 164
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++WD R +VQ R + V G + A G D +D+ K P
Sbjct: 165 TVKLWDNRSR-----RSVQTIEHRFQLLAVALSADGKKVFAGGI-DNSIQVWDMAKGPAP 218
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN----VNDSRVIRTYKG--HVNNRN 278
+ V +GH +TVT + D L++ D ++ W+ V R+++ ++G H ++RN
Sbjct: 219 LDVLEGHSETVTGLSLSPDGKYLLSNAMDNTVRQWDVRPFVTGGRLVQVFQGGTHGSDRN 278
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW-------------VHDFEPVTAAGS 324
+ + + G ++ GS V V+DV G+ ++ H EPV A+ S
Sbjct: 279 LLRCAWSQDGEMVSAGSADRAVHVWDVPSGQELYYLPGHKGTVNEVVFHPREPVIASAS 337
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 20/186 (10%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRS---------------AVCCVEFHPFGSSL 204
+G+DD + P G +S+ P+ R+ AV C++F+P G +L
Sbjct: 12 TGADDSALATV-PESSGTLAISSAPPAPGRTSHLAASTMLLTGHAAAVYCLQFNPMGDAL 70
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVND 263
A G DK +DV + V GH V +++ + +A D L LW+ N
Sbjct: 71 -ATGSFDKTILLWDVYEDCKNYNVLAGHTNAVLDLKWSPNGCQIASASADKTLMLWDSNK 129
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV--HDFEPVTA 321
IR K H N V ++ + L+ S+ V ++D R V H F+ +
Sbjct: 130 GTRIRKCKEHTGCVNSVAVAGDKVAALIATASDDRTVKLWDNRSRRSVQTIEHRFQLLAV 189
Query: 322 AGSERG 327
A S G
Sbjct: 190 ALSADG 195
>gi|428208283|ref|YP_007092636.1| WD40 repeat, subgroup [Chroococcidiopsis thermalis PCC 7203]
gi|428010204|gb|AFY88767.1| WD40 repeat, subgroup [Chroococcidiopsis thermalis PCC 7203]
Length = 1206
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 48/286 (16%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I + F P FA+G R ++I++ + + C +++ S+
Sbjct: 907 IRTVTFSPDGQTFASGCDDRTVKIWH-------------TSNGQCCQTLEGHASRVKSIT 953
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ P G VL SG D V ++L + V + E HG VWSV +S +L A+G
Sbjct: 954 FNP--QGNVLASGSDDRTVRLWNLSTGQCVNVLEH-THG---VWSVAFSPQGKIL-ATGC 1006
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS---------LVAAGCADKK 213
DD + +WD C G+C +Q A + V F P + ++A+G DK
Sbjct: 1007 DDQKLWLWD--CSSGECDKILQGHAG--WILSVIFLPIPPTPLEKGGEEGILASGSKDKT 1062
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYI---------RFLDVDTLVTAG-TDGCLKLWNVND 263
+DV + + +GH VT + D L+ +G TD +KLWNV+
Sbjct: 1063 VRLWDV-STGQCLKILEGHTGWVTSVACSAQAPAANSRDSPNLLASGSTDATVKLWNVST 1121
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
++T++GH + V G +L SE V ++D+ GE
Sbjct: 1122 GECVKTFQGHTHWIRSVAFC--PQGKILASSSEDETVKLWDISTGE 1165
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 20/198 (10%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L S S D T+++W+ G+C+ T Q + R + V F P G + +A+ D+
Sbjct: 621 DRELIGSVSTDQTLRLWN--ISTGQCLRTWQGHSER--IHSVAFSPQGHA-IASSSDDRT 675
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D+ + + GH V + F LV+ G D ++ W+VN R+++T +G
Sbjct: 676 VKLWDI-STGECIRTMQGHTDWVFSVTFSPQGHILVSGGRDRTIRCWDVNTGRIVQTLQG 734
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSV 332
H + V G G + V ++DV G + G+V SV
Sbjct: 735 HTDCIRTVAFC--PDGQTFASGCDDRTVKIWDVSTG--------KCCQTLHGHTGWVLSV 784
Query: 333 CWRRVGEDECTLVAGGSD 350
C+ G+ L + SD
Sbjct: 785 CYSPDGQ---ILASSSSD 799
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 28/263 (10%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A ++++R WD + + + +D + + F P + +GG R IR +++
Sbjct: 668 ASSSDDRTVKLWDISTGECIRTMQGH----TDWVFSVTFSPQGHILVSGGRDRTIRCWDV 723
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
+ +V + C + ++ + P G+ SG D V +D+
Sbjct: 724 NT----GRIVQTLQGHTDC---------IRTVAFCP--DGQTFASGCDDRTVKIWDVSTG 768
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
H G V SV YS +L AS S D T+++W R G+C+ + S A
Sbjct: 769 KCCQTLHGHTG-WVLSVCYSPDGQIL-ASSSSDRTIRLW--RAVTGECIKVL--SGHTGA 822
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
+ F P G++L A+ C + A +DV + + G+ V + F D T+ T+
Sbjct: 823 IQSTTFSPDGNTL-ASSCDGQTAMLWDV-STGEALRTARGYHDGVWSVVFSPDGKTIATS 880
Query: 251 GTDGCLKLWNVNDSRVIRTYKGH 273
+ +KLW+ + + + +GH
Sbjct: 881 DNNQKVKLWDTSTGQCRKALQGH 903
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 43/259 (16%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F+P +V A+G R +R++N+ + V V++H+ + S+ + P
Sbjct: 952 ITFNPQGNVLASGSDDRTVRLWNLST----GQCVNVLEHTH----------GVWSVAFSP 997
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDY---------SKGDPVLG 158
G++L +G D + +D H G + SV + G+ +
Sbjct: 998 --QGKILATGCDDQKLWLWDCSSGECDKILQGHAGW-ILSVIFLPIPPTPLEKGGEEGIL 1054
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSAS-RSAVCCVEFHPFGSS-----LVAAGCADK 212
ASGS D T+++WD G+C+ ++ ++V C P +S L+A+G D
Sbjct: 1055 ASGSKDKTVRLWD--VSTGQCLKILEGHTGWVTSVACSAQAPAANSRDSPNLLASGSTDA 1112
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRT-- 269
++V + V F GH + + F L ++ D +KLW+++ IRT
Sbjct: 1113 TVKLWNV-STGECVKTFQGHTHWIRSVAFCPQGKILASSSEDETVKLWDISTGECIRTLR 1171
Query: 270 ----YKGHVNNRNFVGLSV 284
Y+G +N GL+V
Sbjct: 1172 SKKPYEG-MNVTGVTGLTV 1189
Score = 43.1 bits (100), Expect = 0.20, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 220 RKMVD--PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
R+ +D +L GH V I F D + + + TD L+LWN++ + +RT++GH
Sbjct: 595 REFIDGEQILTLQGHTDWVQAIAFCPDRELIGSVSTDQTLRLWNISTGQCLRTWQGHSER 654
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ V S H + S+ V ++D+ GE
Sbjct: 655 IHSVAFSPQGHA--IASSSDDRTVKLWDISTGE 685
>gi|145532892|ref|XP_001452197.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419883|emb|CAK84800.1| unnamed protein product [Paramecium tetraurelia]
Length = 594
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 26/270 (9%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
+S+++ + F P ++ A+G R IR++++K+ + A +D Y + +
Sbjct: 226 LSEAVRSVNFSPDGTILASGSNDRFIRLWDVKT----GQLKAQLDGHTQQVYSVTFSS-- 279
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
G L SG YD + +D+E + D H R V+SV +S L AS
Sbjct: 280 ---------DGTTLASGSYDKSIRLWDVETGQQKAKLDGH-SREVYSVAFSSDGTTL-AS 328
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GS D ++++WD + K + V V F P G++L A+G D +DV
Sbjct: 329 GSYDKSIRLWDVKIGQEKA----KLDGHSREVYSVNFSPDGTTL-ASGSLDNSIRLWDV- 382
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
K DGH V + F D TL + D ++LW+V + I GH +
Sbjct: 383 KTGQQKAQLDGHLSYVYSVNFSPDGTTLASGSADKSIRLWDVETGQQIAKLDGHSHYVYS 442
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G L GS N + ++DV G+
Sbjct: 443 VNFSP--DGTRLASGSLDNSIRLWDVTIGQ 470
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 131/311 (42%), Gaps = 35/311 (11%)
Query: 11 QAETTNERARC------EWDFNLRTTVSSSSSPNAAV---SDSIGVIEFDPSDSVFATGG 61
Q E+ N C +D ++R ++ NA V S I + F P + A+G
Sbjct: 145 QVESVNFSPDCTTLASGSYDNSIRLWDITTGQQNAKVDCHSHYIYSVNFSPDGTTLASGS 204
Query: 62 IARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDG 121
+ IR++++K+ + + + + S+ + P G +L SG D
Sbjct: 205 YDKSIRLWDVKTGQQKAKLDGLSE-------------AVRSVNFSP--DGTILASGSNDR 249
Query: 122 VVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVS 181
+ +D++ + D H ++V+SV +S L ASGS D ++++WD K
Sbjct: 250 FIRLWDVKTGQLKAQLDGH-TQQVYSVTFSSDGTTL-ASGSYDKSIRLWDVETGQQKA-- 305
Query: 182 TVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
+ V V F G++L A+G DK +DV K+ DGH + V + F
Sbjct: 306 --KLDGHSREVYSVAFSSDGTTL-ASGSYDKSIRLWDV-KIGQEKAKLDGHSREVYSVNF 361
Query: 242 L-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
D TL + D ++LW+V + GH++ V S G L GS +
Sbjct: 362 SPDGTTLASGSLDNSIRLWDVKTGQQKAQLDGHLSYVYSVNFSP--DGTTLASGSADKSI 419
Query: 301 FVYDVRWGEPV 311
++DV G+ +
Sbjct: 420 RLWDVETGQQI 430
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 45/238 (18%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG D + +D++ + D H ++V+SV +S L ASGS+D ++++W
Sbjct: 71 GTTLASGSLDNSIRLWDVKTGQQKAQLDGHT-QQVYSVTFSSDGTTL-ASGSNDNSIRLW 128
Query: 171 DPRCDGGKC----------------------------------VSTVQPSAS----RSAV 192
D + K ++T Q +A +
Sbjct: 129 DVKTGQQKAKLEGHTQQVESVNFSPDCTTLASGSYDNSIRLWDITTGQQNAKVDCHSHYI 188
Query: 193 CCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT 252
V F P G++L A+G DK +DV K DG + V + F T++ +G+
Sbjct: 189 YSVNFSPDGTTL-ASGSYDKSIRLWDV-KTGQQKAKLDGLSEAVRSVNFSPDGTILASGS 246
Query: 253 -DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
D ++LW+V ++ GH V S G L GS + ++DV G+
Sbjct: 247 NDRFIRLWDVKTGQLKAQLDGHTQQVYSVTFS--SDGTTLASGSYDKSIRLWDVETGQ 302
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 5/117 (4%)
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGT 252
V F P G++L A+G D +DV K DGH + V + F D TL +
Sbjct: 64 SVNFSPDGTTL-ASGSLDNSIRLWDV-KTGQQKAQLDGHTQQVYSVTFSSDGTTLASGSN 121
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
D ++LW+V + +GH V S L GS N + ++D+ G+
Sbjct: 122 DNSIRLWDVKTGQQKAKLEGHTQQVESVNFSP--DCTTLASGSYDNSIRLWDITTGQ 176
>gi|409993444|ref|ZP_11276585.1| protein kinase [Arthrospira platensis str. Paraca]
gi|409935713|gb|EKN77236.1| protein kinase [Arthrospira platensis str. Paraca]
Length = 728
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+ I + P A+G +R++++++ +H + + H + +P
Sbjct: 445 TSQILTVAITPDGQTLASGSHDNTVRLWSLQTF--EH-LSTLTGHGGAINSIAISP---- 497
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
GRV+ SG D V +DL K I H R + ++ +S+ L ASG
Sbjct: 498 --------DGRVIASGSRDNTVKLWDLHSKQEIATLKGHE-RDITTIAFSRDGKTL-ASG 547
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+ +WD + + + T++ V V F P G L+A+ D +D+ +
Sbjct: 548 SRDHTITLWD--LETNELIGTLR--GHNHEVRAVAFSPNGR-LIASASQDNTVKLWDIDR 602
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + H K+V I F D TL + +D LKLW+V VI T GH ++
Sbjct: 603 R-EEISTLLSHDKSVNAIAFSRDGQTLASGSSDHTLKLWDVTTKEVIATLHGH--SQAIK 659
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
L++ G ++ G + + V ++D++ E +
Sbjct: 660 SLALSHDGRIIASGGDDDTVQLWDLKTKEAI 690
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D T+++W + +ST+ + A+ + P G ++A+G D +D
Sbjct: 461 ASGSHDNTVRLWS--LQTFEHLSTL--TGHGGAINSIAISPDGR-VIASGSRDNTVKLWD 515
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + + GH + +T I F D TL + D + LW++ + +I T +GH N
Sbjct: 516 LHSKQE-IATLKGHERDITTIAFSRDGKTLASGSRDHTITLWDLETNELIGTLRGH--NH 572
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
++ +G L+ S+ N V ++D + E ++ S V+++ + R
Sbjct: 573 EVRAVAFSPNGRLIASASQDNTVKLWD--------IDRREEISTLLSHDKSVNAIAFSRD 624
Query: 338 GEDECTLVAGGSDGLLHVF 356
G+ TL +G SD L ++
Sbjct: 625 GQ---TLASGSSDHTLKLW 640
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 11/196 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D + +DLE I H V +V +S ++ AS S D T+++W
Sbjct: 541 GKTLASGSRDHTITLWDLETNELIGTLRGHN-HEVRAVAFSPNGRLI-ASASQDNTVKLW 598
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D D + +ST+ + +V + F G +L A+G +D +DV + +
Sbjct: 599 D--IDRREEISTLL--SHDKSVNAIAFSRDGQTL-ASGSSDHTLKLWDVTTK-EVIATLH 652
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH + + + D + + G D ++LW++ I T +GH + + S R
Sbjct: 653 GHSQAIKSLALSHDGRIIASGGDDDTVQLWDLKTKEAIATLRGHSSKIEAIAFSPKR--P 710
Query: 290 LLGCGSETNQVFVYDV 305
LL GS + ++ +
Sbjct: 711 LLVSGSHNRNLEIWQI 726
>gi|392586448|gb|EIW75784.1| HET-E, partial [Coniophora puteana RWD-64-598 SS2]
Length = 470
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 140/339 (41%), Gaps = 45/339 (13%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVV 81
WD + +++ P+ + I + + P + ATG + IRI+ ++ V +
Sbjct: 126 WDASTGDCIATLKHPSYGHTWDILTVAYSPDGAFIATGSRDKTIRIWEAETGRQVGELLK 185
Query: 82 AVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG 141
H V Y G+ L SG DG + +D + E
Sbjct: 186 GHTQHGNVIAY---------------SPDGQRLVSGSQDGTIRVWDTATHQMVMGPLEGH 230
Query: 142 GRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQ-PSASRSAVCCVEFHPF 200
V SV S D L ASG D +++WD G C++T++ P RS V F P
Sbjct: 231 TGLVLSVQLSP-DGALMASGDTDNLLKLWDAST--GTCIATLEHPDCMRS----VAFSP- 282
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
S VA C D YDV + V GHR V +++ D + +A D ++LW
Sbjct: 283 DSKHVATACDDWVVRIYDVGQQ-QLVRELTGHRGWVRCVQYSPDSSLIASASNDHTIRLW 341
Query: 260 NVNDSRVIRT-YKGHVNNRNFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
+ + + + +GH R++V GLS R G L SE + V+DV GE
Sbjct: 342 DASTGNLAKAPLRGH---RHYVSGLSFSRDGQQLVSSSEDESIRVWDVASGEC------- 391
Query: 318 PVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
P++ G V SV + DE LV GGSD + V+
Sbjct: 392 PLS------GHVGSVRAVKFTPDETRLVTGGSDRTIRVW 424
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 28/260 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++ P ++ A+G +++++ + +A ++H P + S+ + P
Sbjct: 237 VQLSPDGALMASGDTDNLLKLWDAST----GTCIATLEH----------PDCMRSVAFSP 282
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+ D+ VV YD+ ++ + E H G V V YS D L AS S+D T+
Sbjct: 283 DSKHVATACDDW--VVRIYDVGQQQLVRELTGHRGW-VRCVQYSP-DSSLIASASNDHTI 338
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD ++ R V + F G LV++ D+ +DV P
Sbjct: 339 RLWDASTGN---LAKAPLRGHRHYVSGLSFSRDGQQLVSS-SEDESIRVWDVASGECP-- 392
Query: 228 VFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH +V ++F +T LVT G+D +++W+V + + H + LS+
Sbjct: 393 -LSGHVGSVRAVKFTPDETRLVTGGSDRTIRVWSVQSGASLHVIEAH--SETVWALSISP 449
Query: 287 HGGLLGCGSETNQVFVYDVR 306
G + G+ V ++D +
Sbjct: 450 DGSRIASGAYDKTVRLWDTK 469
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 14/173 (8%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSS 203
+ +V YS D A+GS D T+++W+ + G+ V +P ++ V + + G
Sbjct: 16 ILTVAYSP-DGAFIATGSADNTIRIWE--AETGRQVG--KPLEGHKNWVHAIAYSADGQH 70
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVN 262
LV+ G DK +D + GH + ++F TLV +G+ D CLKLW+ +
Sbjct: 71 LVS-GSYDKTIRVWDATAHQTVIGPLVGHTYPILAVQFSPNGTLVASGSLDKCLKLWDAS 129
Query: 263 DSRVIRTYK----GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
I T K GH + V S G + GS + +++ G V
Sbjct: 130 TGDCIATLKHPSYGHTWDILTVAYS--PDGAFIATGSRDKTIRIWEAETGRQV 180
>gi|119603356|gb|EAW82950.1| katanin p80 (WD repeat containing) subunit B 1, isoform CRA_a [Homo
sapiens]
gi|119603358|gb|EAW82952.1| katanin p80 (WD repeat containing) subunit B 1, isoform CRA_a [Homo
sapiens]
Length = 564
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|403306020|ref|XP_003943544.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Saimiri
boliviensis boliviensis]
Length = 657
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|338723122|ref|XP_001494571.3| PREDICTED: LOW QUALITY PROTEIN: katanin p80 WD40-containing subunit
B1-like [Equus caballus]
Length = 655
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGXDDCRVNLWSIXKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|291390200|ref|XP_002711590.1| PREDICTED: katanin p80 subunit B 1 [Oryctolagus cuniculus]
Length = 655
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|444725641|gb|ELW66202.1| Katanin p80 WD40-containing subunit B1 [Tupaia chinensis]
Length = 694
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 82 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 139
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 140 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 193
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 194 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 252
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 253 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 300
Query: 349 SDGL 352
D L
Sbjct: 301 QDSL 304
>gi|30584393|gb|AAP36445.1| Homo sapiens katanin p80 (WD40-containing) subunit B 1 [synthetic
construct]
gi|61369270|gb|AAX43309.1| katanin p80 subunit B 1 [synthetic construct]
gi|61369279|gb|AAX43310.1| katanin p80 subunit B 1 [synthetic construct]
Length = 656
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|67078524|ref|NP_001019917.1| katanin p80 WD40-containing subunit B1 [Rattus norvegicus]
gi|63146654|gb|AAY34149.1| katanin p80 subunit B1 [Rattus norvegicus]
gi|149032415|gb|EDL87306.1| katanin p80 (WD40-containing) subunit B 1, isoform CRA_a [Rattus
norvegicus]
Length = 655
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|443478395|ref|ZP_21068154.1| serine/threonine protein kinase with WD40 repeats [Pseudanabaena
biceps PCC 7429]
gi|443016323|gb|ELS31011.1| serine/threonine protein kinase with WD40 repeats [Pseudanabaena
biceps PCC 7429]
Length = 646
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 23/266 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P+ FA+G R +R++NI+ D+ + + ++ + + ++++
Sbjct: 362 VRAVTFFPNGFSFASGSYDRTLRLWNIR----DNQSFGTLSN------HLGSISGINAIA 411
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
P +G + D + ++ PI + H G+ V+SV YS L S S D
Sbjct: 412 VHP--NGNTFATACIDKSIKLWNFRSGEPIRNLEGHNGQ-VYSVAYSPDGEKL-VSASAD 467
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W+ R G + + + + V V FHP G +A+ DK +DV +
Sbjct: 468 KTIKLWNWR--KGTVLQSF--TGHQDKVVAVAFHPDGKR-IASASFDKTIKIWDVSTGKE 522
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+L +GH V I F T++ +G+ D +K+W+ N +VI T+ GH + ++
Sbjct: 523 -ILTINGHTAAVNAIAFSSDGTMLVSGSQDQTVKIWDANTGKVISTFSGHAG--GVLAVA 579
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGE 309
R G + G + ++ VR GE
Sbjct: 580 FNRDGTAIASGGVDKTIHLWSVRTGE 605
>gi|73949770|ref|XP_850865.1| PREDICTED: katanin p80 WD40-containing subunit B1 isoform 1 [Canis
lupus familiaris]
Length = 655
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|332227951|ref|XP_003263155.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 [Nomascus
leucogenys]
Length = 656
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVMSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|83779014|ref|NP_005877.2| katanin p80 WD40 repeat-containing subunit B1 [Homo sapiens]
gi|60390213|sp|Q9BVA0.1|KTNB1_HUMAN RecName: Full=Katanin p80 WD40 repeat-containing subunit B1;
Short=Katanin p80 subunit B1; AltName: Full=p80 katanin
gi|12655011|gb|AAH01353.1| Katanin p80 (WD repeat containing) subunit B 1 [Homo sapiens]
gi|30582883|gb|AAP35668.1| katanin p80 (WD40-containing) subunit B 1 [Homo sapiens]
gi|48145641|emb|CAG33043.1| KATNB1 [Homo sapiens]
gi|61359101|gb|AAX41668.1| katanin p80 subunit B 1 [synthetic construct]
gi|61359108|gb|AAX41669.1| katanin p80 subunit B 1 [synthetic construct]
gi|119603357|gb|EAW82951.1| katanin p80 (WD repeat containing) subunit B 1, isoform CRA_b [Homo
sapiens]
gi|123979728|gb|ABM81693.1| katanin p80 (WD repeat containing) subunit B 1 [synthetic
construct]
Length = 655
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|12845754|dbj|BAB26884.1| unnamed protein product [Mus musculus]
Length = 657
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|354495460|ref|XP_003509848.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Cricetulus
griseus]
Length = 655
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|298240985|ref|ZP_06964792.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
44963]
gi|297554039|gb|EFH87903.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
44963]
Length = 1237
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 37/293 (12%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIK--SVLVDHPV 80
WD R + S +A V + F P + A+GG IR+++ K + L D P
Sbjct: 664 WDVESRALLWSGRHTSAIVG-----LAFSPDGDLLASGGHDASIRVWDPKLGTPLQDVP- 717
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
P + +L W P GR L S DG + + + ++R
Sbjct: 718 ---------------HPGAVFALAWSP--DGRRLASSGSDGHIQLWKRQPTGLAYDRQTL 760
Query: 141 GGRRVW--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
G W + +S VL ++G D G + +W+ G+C T++ R V CV +
Sbjct: 761 AGHTHWVRGLAFSPDGSVLASAGWD-GNVNLWE--LASGRCAQTLKGHTQR--VHCVAWS 815
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLK 257
G++L A+GC D +DV++ V V GH V + F D L++ DG L+
Sbjct: 816 ADGATL-ASGCFDHAIRLWDVQEGRSRV-VLSGHGAAVHSLAFTSDSRHLLSGSDDGTLR 873
Query: 258 LWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
LW V + +R +G+ + + + S G L G V V++V G P
Sbjct: 874 LWEVERGQCVRVLQGYAASLHDLAWSP--DGTQLVSGGTDTHVTVWEVASGMP 924
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 84/206 (40%), Gaps = 26/206 (12%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
R L S DG V +D+E + ++ H V GD L ASG D ++++WD
Sbjct: 650 RQLASASSDGTVKLWDVESRALLWS-GRHTSAIVGLAFSPDGD--LLASGGHDASIRVWD 706
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC--------ADKKAYAYDVRKMV 223
P K + +Q AV + + P G L ++G AYD + +
Sbjct: 707 P-----KLGTPLQDVPHPGAVFALAWSPDGRRLASSGSDGHIQLWKRQPTGLAYDRQTLA 761
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
GH V + F D L +AG DG + LW + R +T KGH + V
Sbjct: 762 -------GHTHWVRGLAFSPDGSVLASAGWDGNVNLWELASGRCAQTLKGHTQRVHCVAW 814
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWG 308
S G L G + + ++DV+ G
Sbjct: 815 SA--DGATLASGCFDHAIRLWDVQEG 838
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 30/223 (13%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYD--------LEKKVPIFERDEHGGRRVWSVDYS 151
S + W P G L SG V+ +D L ++ P + R R WS D
Sbjct: 980 FSGVAWSP--DGERLASGTLLQGVLVWDGKARSPRWLSRQFPPWIR-----RVAWSPD-- 1030
Query: 152 KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA-AGCA 210
G ++G G DG + +WD G + + S + AV V + P GS L + +G
Sbjct: 1031 -GTRLVGGGG--DGHVYVWD--ASDGTLLQRL--SGHQGAVTSVAWSPNGSRLASGSGSN 1083
Query: 211 DK-KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIR 268
D+ + + +D ++ + V GH V+ + + L++ G+DG ++ W + + ++
Sbjct: 1084 DRGEGFVWDAQRG-ERVFALAGHPGVVSAVAWSPCGKRLISGGSDGKVRWWEIQSEQCVQ 1142
Query: 269 TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+GH + L V GG L + + ++D+ G+P+
Sbjct: 1143 VQEGHQGAVH--ALKVSPDGGRLASCGDDGAIVLWDLERGKPL 1183
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 110/293 (37%), Gaps = 63/293 (21%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
A L L W P G L SG D V +++ +P H R V+ V +S +L
Sbjct: 891 ASLHDLAWSP--DGTQLVSGGTDTHVTVWEVASGMPRGVLRGHS-RTVYGVAWSPDGRLL 947
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ G D ++ W P G CV + S + V + P G L +
Sbjct: 948 ASCGWDH-AIRNWHPTT--GACVQILGGLDHSDTVFSGVAWSPDGERLASG--------- 995
Query: 217 YDVRKMVDPVLVFDGH--------RKTVTYIRFL----DVDTLVTAGTDGCLKLWNVNDS 264
++ VLV+DG R+ +IR + D LV G DG + +W+ +D
Sbjct: 996 ----TLLQGVLVWDGKARSPRWLSRQFPPWIRRVAWSPDGTRLVGGGGDGHVYVWDASDG 1051
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETN---QVFVYDVRWGEPVWVHDFEPVTA 321
+++ GH V S +G L GS +N + FV+D + GE V+ P
Sbjct: 1052 TLLQRLSGHQGAVTSVAWSP--NGSRLASGSGSNDRGEGFVWDAQRGERVFALAGHP--- 1106
Query: 322 AGSERGFVSSVCWR------------------RVGEDECTLVAGGSDGLLHVF 356
G VS+V W + ++C V G G +H
Sbjct: 1107 -----GVVSAVAWSPCGKRLISGGSDGKVRWWEIQSEQCVQVQEGHQGAVHAL 1154
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 18/137 (13%)
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
LV+ H +V + F D L +A +DG +KLW+V +SR + H + VGL+
Sbjct: 631 LVWSAHADSVWALAFSPDERQLASASSDGTVKLWDV-ESRALLWSGRHTS--AIVGLAFS 687
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
G LL G + V+D + G P + V G+ V ++ W D L
Sbjct: 688 PDGDLLASGGHDASIRVWDPKLGTP-----LQDVPHPGA----VFALAW---SPDGRRLA 735
Query: 346 AGGSDGLLHVFVGKKKP 362
+ GSDG H+ + K++P
Sbjct: 736 SSGSDG--HIQLWKRQP 750
>gi|426382338|ref|XP_004057764.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Gorilla gorilla
gorilla]
Length = 655
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|126658553|ref|ZP_01729700.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp. CCY0110]
gi|126620140|gb|EAZ90862.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp. CCY0110]
Length = 1523
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 84/362 (23%), Positives = 155/362 (42%), Gaps = 52/362 (14%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A +N+ WD + + N +S + F P+ + A+G ++++N+
Sbjct: 985 ASGSNDNTIKLWDVKTGEVIHTLKGHNEPISS----VSFSPNGKILASGSDDNTVKLWNL 1040
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGD---YDGVVMEYDL 128
++ + + D V +SL + P +G++L SG +G ++ +++
Sbjct: 1041 ETGELIRTLKGHNDSGFV-----------TSLSFSP--NGQLLASGSNGSKNGSIILWNI 1087
Query: 129 EKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSA 187
K I + E+ +WSV +S G + SGSDD T+++WD + G+ + T++
Sbjct: 1088 -KTGQIIKNLENREVTIWSVSFSPDGKSLASGSGSDDNTVKLWD--IETGELIRTLKGHN 1144
Query: 188 SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
R V V F P S +A+ D + ++V ++ PV + H V + F D
Sbjct: 1145 DR--VRSVSFSP-DSKTLASSSDDGRIQFWNV-QLRQPVSITKAHDNGVYSVSFHPDGKI 1200
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-----HGGLLGCGSETNQVF 301
L + G DG +KLW+V +I T+ H N SVW G +L + +
Sbjct: 1201 LASGGRDGTIKLWDVEKGEIIHTFN-HDNG------SVWNIIFNPDGKILASSGDDGTIK 1253
Query: 302 VYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKK 361
++DV+ E + G V + + G+ L +GG DG + ++ +K
Sbjct: 1254 LWDVK--------RTELLNTLNHHTGLVRRINFSPEGK---ILASGGDDGTIKLWDVEKG 1302
Query: 362 PL 363
L
Sbjct: 1303 QL 1304
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 25/225 (11%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+G++L SG DG + ++LE I R G + S+ ++ +L +S + ++
Sbjct: 895 NGQILASGGGDGTIKLWNLETGELI--RTLKGQNDTISSISFNGNSKILASSSINHNIIE 952
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+W+ + GK + T++ V V F F +A+G D +DV K + +
Sbjct: 953 IWN--LETGKVIRTLK--EHNEGVQSVSF-SFDGKTLASGSNDNTIKLWDV-KTGEVIHT 1006
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFV-GLSVWR 286
GH + ++ + F ++ +G+D +KLWN+ +IRT KGH N+ FV LS
Sbjct: 1007 LKGHNEPISSVSFSPNGKILASGSDDNTVKLWNLETGELIRTLKGH-NDSGFVTSLSFSP 1065
Query: 287 HGGLLGC---GSETNQVFVYDVRWGE----------PVWVHDFEP 318
+G LL GS+ + +++++ G+ +W F P
Sbjct: 1066 NGQLLASGSNGSKNGSIILWNIKTGQIIKNLENREVTIWSVSFSP 1110
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 27/246 (10%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
++ S+ + P + + L S DG + ++++ + P+ H V+SV + +L
Sbjct: 1146 RVRSVSFSPDS--KTLASSSDDGRIQFWNVQLRQPVSITKAHDNG-VYSVSFHPDGKIL- 1201
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASG DGT+++WD + G+ + T + +V + F+P G L ++G D +D
Sbjct: 1202 ASGGRDGTIKLWD--VEKGEIIHTF--NHDNGSVWNIIFNPDGKILASSG-DDGTIKLWD 1256
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
V++ + + + H V I F + L + G DG +KLW+V ++I T + N
Sbjct: 1257 VKR-TELLNTLNHHTGLVRRINFSPEGKILASGGDDGTIKLWDVEKGQLIHTLNPY--NE 1313
Query: 278 NFVGLSVWRHGGLL---GCGSETNQVF-VYDVRWGEPVWVHD-------FEP---VTAAG 323
V +S +G LL G S+T +++ + ++ EP+ HD F P + A+G
Sbjct: 1314 AIVSISFSPNGKLLAASGINSKTIKIWNLQTQKYLEPLVGHDTAIQSLSFSPDNKILASG 1373
Query: 324 SERGFV 329
S++G +
Sbjct: 1374 SDQGII 1379
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 75/321 (23%), Positives = 144/321 (44%), Gaps = 39/321 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKI-RIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
+D+I I F+ + + A+ I I I+N+++ V + + +H++ +
Sbjct: 926 NDTISSISFNGNSKILASSSINHNIIEIWNLETGKV---IRTLKEHNE----------GV 972
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S+ + G+ L SG D + +D++ I H + SV +S +L AS
Sbjct: 973 QSVSFS--FDGKTLASGSNDNTIKLWDVKTGEVIHTLKGHN-EPISSVSFSPNGKIL-AS 1028
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDD T+++W+ + G+ + T++ V + F P G L+A+G K + +
Sbjct: 1029 GSDDNTVKLWN--LETGELIRTLKGHNDSGFVTSLSFSPNGQ-LLASGSNGSKNGSIILW 1085
Query: 221 KMVDPVLVFDGHRKTVTY--IRFLDVDTLVTAGT---DGCLKLWNVNDSRVIRTYKGHVN 275
+ ++ + + VT + F + +G+ D +KLW++ +IRT KGH
Sbjct: 1086 NIKTGQIIKNLENREVTIWSVSFSPDGKSLASGSGSDDNTVKLWDIETGELIRTLKGH-- 1143
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
N +S L S+ ++ ++V+ +PV +T A + G V SV +
Sbjct: 1144 NDRVRSVSFSPDSKTLASSSDDGRIQFWNVQLRQPV------SITKA-HDNG-VYSVSFH 1195
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
G+ L +GG DG + ++
Sbjct: 1196 PDGK---ILASGGRDGTIKLW 1213
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 44/281 (15%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D + I+F P+ + A+GG I+++N+++ + + D +SS
Sbjct: 885 DWVMNIDFHPNGQILASGGGDGTIKLWNLETGELIRTLKGQND-------------TISS 931
Query: 103 LKWKPGTSGRVLGSGDYDGVVME-YDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ + G S ++L S + ++E ++LE I EH V SV +S L ASG
Sbjct: 932 ISFN-GNS-KILASSSINHNIIEIWNLETGKVIRTLKEH-NEGVQSVSFSFDGKTL-ASG 987
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D T+++WD + G+ + T++ + V F P G ++A+G D +++ +
Sbjct: 988 SNDNTIKLWDVKT--GEVIHTLK--GHNEPISSVSFSPNG-KILASGSDDNTVKLWNL-E 1041
Query: 222 MVDPVLVFDGHRKT--VTYIRFLDVDTLVTAGT----DGCLKLWNVNDSRVIRTYKGHVN 275
+ + GH + VT + F L+ +G+ +G + LWN+ ++I+ ++
Sbjct: 1042 TGELIRTLKGHNDSGFVTSLSFSPNGQLLASGSNGSKNGSIILWNIKTGQIIK----NLE 1097
Query: 276 NRNFVGLSVWR-----HGGLL--GCGSETNQVFVYDVRWGE 309
NR +++W G L G GS+ N V ++D+ GE
Sbjct: 1098 NRE---VTIWSVSFSPDGKSLASGSGSDDNTVKLWDIETGE 1135
>gi|402908558|ref|XP_003917005.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Papio anubis]
gi|355710242|gb|EHH31706.1| Katanin p80 WD40-containing subunit B1 [Macaca mulatta]
gi|380784561|gb|AFE64156.1| katanin p80 WD40-containing subunit B1 [Macaca mulatta]
gi|383415065|gb|AFH30746.1| katanin p80 WD40-containing subunit B1 [Macaca mulatta]
Length = 655
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|171846552|gb|AAI61823.1| Katnb1 protein [Rattus norvegicus]
Length = 640
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|84095201|ref|NP_083081.2| katanin p80 WD40 repeat-containing subunit B1 [Mus musculus]
gi|60390204|sp|Q8BG40.1|KTNB1_MOUSE RecName: Full=Katanin p80 WD40 repeat-containing subunit B1;
Short=Katanin p80 subunit B1; AltName: Full=p80 katanin
gi|26329699|dbj|BAC28588.1| unnamed protein product [Mus musculus]
gi|26340068|dbj|BAC33697.1| unnamed protein product [Mus musculus]
gi|26352874|dbj|BAC40067.1| unnamed protein product [Mus musculus]
gi|28175668|gb|AAH45200.1| Katanin p80 (WD40-containing) subunit B 1 [Mus musculus]
gi|148679211|gb|EDL11158.1| katanin p80 (WD40-containing) subunit B 1 [Mus musculus]
Length = 658
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|114662827|ref|XP_001149222.1| PREDICTED: katanin p80 WD40-containing subunit B1 isoform 5 [Pan
troglodytes]
gi|397506516|ref|XP_003823773.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Pan paniscus]
gi|410227192|gb|JAA10815.1| katanin p80 (WD repeat containing) subunit B 1 [Pan troglodytes]
gi|410253894|gb|JAA14914.1| katanin p80 (WD repeat containing) subunit B 1 [Pan troglodytes]
gi|410298800|gb|JAA28000.1| katanin p80 (WD repeat containing) subunit B 1 [Pan troglodytes]
gi|410332091|gb|JAA34992.1| katanin p80 (WD repeat containing) subunit B 1 [Pan troglodytes]
Length = 655
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|26327487|dbj|BAC27487.1| unnamed protein product [Mus musculus]
Length = 658
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|359462866|ref|ZP_09251429.1| WD repeat-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 1188
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 81/317 (25%), Positives = 130/317 (41%), Gaps = 58/317 (18%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIK-----SVLVDHPVVAVVDHSKVCDYYICTP 97
D+I + F + A+ + IR++N+ +VL +H
Sbjct: 649 DAIWSVAFSREGDILASCSSDQTIRLWNLAEGRCLNVLQEHD------------------ 690
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
A + S+ + P + L S D + +DLE I H VWSV +S L
Sbjct: 691 APVHSVAFSP--TSHYLASSSADSTIKLWDLETGQCITTFQGHN-ETVWSVAFSPTSHYL 747
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS+D TM++WD G+C+ ++ S +A+ V+F G +L A+G D +
Sbjct: 748 -ASGSNDKTMRLWD--IQSGQCLMSL--SGHSNAIVSVDFSADGQTL-ASGSQDNTIRLW 801
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D V F H V + F + L + G D ++LWN+ + RT+ G N
Sbjct: 802 DTSSG-HCVACFTDHTSWVWSVAFAHSSNLLASGGQDRSVRLWNIAKGKCFRTFSGFTN- 859
Query: 277 RNFVGLSVWR-----HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
+VW G L GS+ + +D + G+ + H + GFVS+
Sbjct: 860 ------TVWSLVFTPEGNRLISGSQDGWIRFWDTQRGDCLQAH---------QQEGFVST 904
Query: 332 VCWRRVGEDECTLVAGG 348
V + D L +GG
Sbjct: 905 VA---ISPDGHLLASGG 918
Score = 47.4 bits (111), Expect = 0.011, Method: Composition-based stats.
Identities = 80/314 (25%), Positives = 123/314 (39%), Gaps = 45/314 (14%)
Query: 12 AETTNERARCEWDFNL-RTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYN 70
A +N++ WD + +S S NA VS ++F A+G IR+++
Sbjct: 748 ASGSNDKTMRLWDIQSGQCLMSLSGHSNAIVS-----VDFSADGQTLASGSQDNTIRLWD 802
Query: 71 IKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPG--TSGRVLGSGDYDGVVMEYDL 128
S H V DH+ S W S +L SG D V +++
Sbjct: 803 TSS---GHCVACFTDHT--------------SWVWSVAFAHSSNLLASGGQDRSVRLWNI 845
Query: 129 EKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSA 187
K F VWS+ ++ +G+ ++ SGS DG ++ WD + G C+ Q
Sbjct: 846 AKG-KCFRTFSGFTNTVWSLVFTPEGNRLI--SGSQDGWIRFWDTQ--RGDCL---QAHQ 897
Query: 188 SRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDV---RKMVDPVLVFDGHRKTVTYIRFLD 243
V V P G L + G A D K +D+ R + + FD R I F
Sbjct: 898 QEGFVSTVAISPDGHLLASGGYAQDNKLKIWDLDNDRLYSNLPVSFDVTRA----ITFSP 953
Query: 244 VDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFV 302
L+ +D G L+LW+VN + +GH N V S G LL G + +
Sbjct: 954 DGNLLACTSDLGDLQLWDVNAGLCTQRLQGHSNAIWSVAFS--PDGCLLASGGMDQTLRL 1011
Query: 303 YDVRWGEPVWVHDF 316
+ V G V ++
Sbjct: 1012 WQVENGSCCEVFEY 1025
Score = 45.8 bits (107), Expect = 0.032, Method: Composition-based stats.
Identities = 71/347 (20%), Positives = 134/347 (38%), Gaps = 64/347 (18%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD +++ N +++ + F P+ A+G + +R+++I+S +++
Sbjct: 717 WDLETGQCITTFQGHN----ETVWSVAFSPTSHYLASGSNDKTMRLWDIQS---GQCLMS 769
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ HS + S+ + G+ L SG D + +D + +H
Sbjct: 770 LSGHSNA----------IVSVDFS--ADGQTLASGSQDNTIRLWDTSSGHCVACFTDHTS 817
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
VWSV ++ +L ASG D ++++W+ GKC T S + V + F P G+
Sbjct: 818 -WVWSVAFAHSSNLL-ASGGQDRSVRLWN--IAKGKCFRTF--SGFTNTVWSLVFTPEGN 871
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG---TDGCLKLW 259
L+ +G D +D ++ L V+ + L+ +G D LK+W
Sbjct: 872 RLI-SGSQDGWIRFWDTQR--GDCLQAHQQEGFVSTVAISPDGHLLASGGYAQDNKLKIW 928
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG----------E 309
++++ R+ + + S G LL C S+ + ++DV G
Sbjct: 929 DLDNDRLYSNLPVSFDVTRAITFS--PDGNLLACTSDLGDLQLWDVNAGLCTQRLQGHSN 986
Query: 310 PVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+W F P D C L +GG D L ++
Sbjct: 987 AIWSVAFSP---------------------DGCLLASGGMDQTLRLW 1012
Score = 45.4 bits (106), Expect = 0.045, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 142 GRRVW--SVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
G W S+ +S GD + ASGS D T+++WD D G+C++T+ + + A+ V F
Sbjct: 604 GHTAWISSIAFSPNGDRL--ASGSFDHTLRIWD--IDTGQCLNTL--TGHQDAIWSVAFS 657
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLK 257
G ++A+ +D+ +++ + + V H V + F L ++ D +K
Sbjct: 658 REG-DILASCSSDQTIRLWNLAEG-RCLNVLQEHDAPVHSVAFSPTSHYLASSSADSTIK 715
Query: 258 LWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
LW++ + I T++GH V S H L GS + ++D++ G+
Sbjct: 716 LWDLETGQCITTFQGHNETVWSVAFSPTSH--YLASGSNDKTMRLWDIQSGQ 765
>gi|410983599|ref|XP_003998126.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Felis catus]
Length = 655
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|156120467|ref|NP_001095379.1| katanin p80 WD40-containing subunit B1 [Bos taurus]
gi|151554590|gb|AAI49992.1| KATNB1 protein [Bos taurus]
gi|296477928|tpg|DAA20043.1| TPA: katanin p80 subunit B 1 [Bos taurus]
Length = 663
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V S+ + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSILF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|349605878|gb|AEQ00967.1| E3 ubiquitin-protein ligase RFWD2-like protein, partial [Equus
caballus]
Length = 115
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
TD LKLWNV +R++KGH+N +NFVGL+ +G + CGSE N +++Y + +
Sbjct: 2 TDSQLKLWNVGKPYCLRSFKGHINEKNFVGLA--SNGDYIACGSENNSLYLYYKGLSKTL 59
Query: 312 WVHDFEPVTAA-------GSERGFVSSVCWRRVGEDEC-TLVAGGSDGLLHVF 356
F+ V + FVS+VCWR + + E L+A S G + V
Sbjct: 60 LTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVL 112
>gi|395839504|ref|XP_003792629.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Otolemur
garnettii]
Length = 655
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|426242435|ref|XP_004015078.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Ovis aries]
Length = 659
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V S+ + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSILF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|354569113|ref|ZP_08988271.1| (Myosin heavy-chain) kinase [Fischerella sp. JSC-11]
gi|353538988|gb|EHC08488.1| (Myosin heavy-chain) kinase [Fischerella sp. JSC-11]
Length = 1171
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
SL + P + R L SG D V +D+ + EHG VWSV +S +GD ++ S
Sbjct: 602 SLAFSPDS--RTLASGGSDCTVKLWDVATGQCLHSLQEHGNE-VWSVAFSPEGDKLV--S 656
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
G DD +++W R G+C+ Q + V V F G +LV+ G D +DV
Sbjct: 657 GCDDQIIRLWSVRT--GECLKIFQ--GHTNWVLSVAFSLDGQTLVS-GSDDNTIRLWDVN 711
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ + +F GH + I D L ++ D ++LWN++ R ++GH N
Sbjct: 712 SG-ECLKIFQGHSDGIRSISLSPDGQMLASSSDDQTIRLWNLSTGECQRIFRGHTNQIFS 770
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G +L GS V ++DVR GE
Sbjct: 771 VAFS--PQGDILASGSHDQTVRLWDVRTGE 798
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L +GD +G + + + + H V S+ +S L ASG D T+++W
Sbjct: 567 GKLLAAGDSNGEIHLWQVADGKQLLILRGHANWVV-SLAFSPDSRTL-ASGGSDCTVKLW 624
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+C+ ++Q + V V F P G LV+ GC D+ + VR + + +F
Sbjct: 625 D--VATGQCLHSLQEHGNE--VWSVAFSPEGDKLVS-GCDDQIIRLWSVRTG-ECLKIFQ 678
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F LD TLV+ D ++LW+VN ++ ++GH + + LS G
Sbjct: 679 GHTNWVLSVAFSLDGQTLVSGSDDNTIRLWDVNSGECLKIFQGHSDGIRSISLS--PDGQ 736
Query: 290 LLGCGSETNQVFVYDVRWGE 309
+L S+ + ++++ GE
Sbjct: 737 MLASSSDDQTIRLWNLSTGE 756
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 23/196 (11%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
+++SV +S +L ASGS D T+++WD R G+C Q ++ V V F P G
Sbjct: 767 QIFSVAFSPQGDIL-ASGSHDQTVRLWDVRT--GECQRIFQGHSN--IVFSVAFSP-GGD 820
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN 262
++A+G D+ + + F GH + + F D TL + G D ++LWNV+
Sbjct: 821 VLASGSRDQTVKLWHI-PTSQCFKTFQGHSNQILSVAFNPDGKTLASGGHDQKVRLWNVS 879
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE----------PVW 312
+ ++T+ GH N V + G +LG GS V ++DV G+ VW
Sbjct: 880 TGQTLKTFYGHTNWVYSVAFN--SQGNILGSGSADKTVKLWDVSTGQCLRTCQGHSAAVW 937
Query: 313 VHDFEP---VTAAGSE 325
F P + +GSE
Sbjct: 938 SVAFSPDGQILVSGSE 953
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 126/318 (39%), Gaps = 82/318 (25%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ I + F+P A+GG +K+R++N+ + + H+ Y + ++
Sbjct: 849 SNQILSVAFNPDGKTLASGGHDQKVRLWNVST---GQTLKTFYGHTNWV-YSVAFNSQ-- 902
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G +LGSG D V +D+ + H VWSV +S +L SG
Sbjct: 903 ---------GNILGSGSADKTVKLWDVSTGQCLRTCQGHSAA-VWSVAFSPDGQIL-VSG 951
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D T+++W+ R G+ + T+Q +A+ V F P G+ L A+G D+ +D K
Sbjct: 952 SEDQTLRLWNVRT--GEVLRTLQ--GHNAAIWSVAFSPQGTVL-ASGSLDQTVRLWDA-K 1005
Query: 222 MVDPVLVFDGHR-----------------------------KTVTYIRFLDVDT------ 246
+ + +GHR +T +R L V+T
Sbjct: 1006 TGECLRTLEGHRSWAWAVAFSSDGELLASTSTDRTLRLWSVRTGECLRVLQVETGWLLSV 1065
Query: 247 --------LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW-------RHGGLL 291
L T+ D +KLW+++ +T GH S W L
Sbjct: 1066 AFSPDNRMLATSSQDHTIKLWDISTGECFKTLFGH---------SAWIWSVAFCSDNQTL 1116
Query: 292 GCGSETNQVFVYDVRWGE 309
GSE + +++V+ GE
Sbjct: 1117 VSGSEDETIRLWNVKTGE 1134
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 70/312 (22%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD I I P + A+ + IR++N+ + + + ++
Sbjct: 723 SDGIRSISLSPDGQMLASSSDDQTIRLWNLST-------------GECQRIFRGHTNQIF 769
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGAS 160
S+ + P G +L SG +D V +D+ + +R G V+SV +S G VL AS
Sbjct: 770 SVAFSP--QGDILASGSHDQTVRLWDV--RTGECQRIFQGHSNIVFSVAFSPGGDVL-AS 824
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GS D T+++W +C T Q +++ + V F+P G +L A+G D+K ++V
Sbjct: 825 GSRDQTVKLW--HIPTSQCFKTFQGHSNQ--ILSVAFNPDGKTL-ASGGHDQKVRLWNV- 878
Query: 221 KMVDPVLVFDGHRKTVTYIRF------------------LDVDT---------------- 246
+ F GH V + F DV T
Sbjct: 879 STGQTLKTFYGHTNWVYSVAFNSQGNILGSGSADKTVKLWDVSTGQCLRTCQGHSAAVWS 938
Query: 247 ---------LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSET 297
LV+ D L+LWNV V+RT +GH N ++ G +L GS
Sbjct: 939 VAFSPDGQILVSGSEDQTLRLWNVRTGEVLRTLQGH--NAAIWSVAFSPQGTVLASGSLD 996
Query: 298 NQVFVYDVRWGE 309
V ++D + GE
Sbjct: 997 QTVRLWDAKTGE 1008
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 28/246 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S ++ + F P + +G + +R++N+++ +V A +
Sbjct: 933 SAAVWSVAFSPDGQILVSGSEDQTLRLWNVRT-------------GEVLRTLQGHNAAIW 979
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR-VWSVDYSKGDPVLGAS 160
S+ + P G VL SG D V +D K R G R W+V +S D L AS
Sbjct: 980 SVAFSP--QGTVLASGSLDQTVRLWD--AKTGECLRTLEGHRSWAWAVAFS-SDGELLAS 1034
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D T+++W R G+C+ +Q + V F P + ++A D +D+
Sbjct: 1035 TSTDRTLRLWSVRT--GECLRVLQ--VETGWLLSVAFSP-DNRMLATSSQDHTIKLWDIS 1089
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH--VNNR 277
+F GH + + F D TLV+ D ++LWNV + K
Sbjct: 1090 TGECFKTLF-GHSAWIWSVAFCSDNQTLVSGSEDETIRLWNVKTGECFKILKAEKPYERL 1148
Query: 278 NFVGLS 283
N G+S
Sbjct: 1149 NLTGVS 1154
>gi|344256620|gb|EGW12724.1| Katanin p80 WD40-containing subunit B1 [Cricetulus griseus]
Length = 320
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D+ F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWDLE--------KFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|351697747|gb|EHB00666.1| Katanin p80 WD40-containing subunit B1, partial [Heterocephalus
glaber]
Length = 641
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 20 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 77
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 78 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 131
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 132 RGHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 190
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 191 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 238
Query: 349 SDGL 352
D L
Sbjct: 239 QDSL 242
>gi|428311504|ref|YP_007122481.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
gi|428253116|gb|AFZ19075.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 1323
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 80/350 (22%), Positives = 149/350 (42%), Gaps = 47/350 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK-- 99
SD I + F P + ATG R +R++++++ + + + + + A+
Sbjct: 685 SDRIFSLAFSPDGRLLATGSEDRCVRVWDVRTGQLFKILSGHTNEVRSVAFAPQYSARRT 744
Query: 100 ---------LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDY 150
L + P +S +L SG YDG V +D+ + + +EH RVWSV +
Sbjct: 745 QKNSGFREHLLPINPTPLSSEYLLASGSYDGTVRLWDINQGECLSILEEHTD-RVWSVAF 803
Query: 151 SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA 210
S +L AS S D T+++W+ GKC+ ++ + + V F P G +L A+G
Sbjct: 804 SPDGKIL-ASSSSDRTVKLWE--ASSGKCLKSLWGHTQQ--IRTVAFSPDGKTL-ASGSD 857
Query: 211 DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV----------DTLVTAGT-DGCLKLW 259
D ++ + + + + GH ++ I F V D+L+ +G+ D +++W
Sbjct: 858 DHCVRLWN-QHTGECLRILQGHTSWISSIAFSPVSKAVATLGASDSLLASGSEDQSVRVW 916
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP--------- 310
+ ++T +GH N V + G L GS+ + + + G+
Sbjct: 917 ETRTNLCLKTIQGHSNGVWSVAFN--SQGTTLASGSQDGVIRFWHSKTGKSIREFPAHSS 974
Query: 311 -VWVHDFEP---VTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+W F P + A+GSE + W +GE + G D + +
Sbjct: 975 WIWSVTFSPNRHILASGSEDRTIK--LWDILGEQHLKTLTGHKDAVFSLL 1022
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 26/268 (9%)
Query: 40 AVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK 99
A S I + F P+ + A+G R I++++I L + + + H
Sbjct: 971 AHSSWIWSVTFSPNRHILASGSEDRTIKLWDI---LGEQHLKTLTGHKDA---------- 1017
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ SL + P +G+ L SG DG + +D+ H G +WS+ S D L A
Sbjct: 1018 VFSLLFSP--NGQTLFSGSLDGTIKLWDILTGECRQTWQGHSGG-IWSISLSS-DGKLLA 1073
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD D G C+ T+ S C + + ++ +G AD + +
Sbjct: 1074 SGSQDQTLKLWD--VDTGCCIKTLPGHRSWIRACAISPN---QQILVSGSADGTIKLWRI 1128
Query: 220 RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ H V + F D T ++G DG +KLWN++ + GH
Sbjct: 1129 NTG-ECYQTLQAHAGPVLSVAFDPDEQTFASSGADGFVKLWNISSLPSCQILHGHDKWVR 1187
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVR 306
F+ S G +L S+ + ++ V+
Sbjct: 1188 FLAYS--PDGQILASCSQDETIKLWQVK 1213
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 30/214 (14%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGS DGT+++WD + G+C+S ++ R V V F P G ++A+ +D+
Sbjct: 767 LLASGSYDGTVRLWD--INQGECLSILEEHTDR--VWSVAFSPDGK-ILASSSSDRTVKL 821
Query: 217 YDVR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
++ K + + GH + + + F D TL + D C++LWN + +R +GH
Sbjct: 822 WEASSGKCLKSLW---GHTQQIRTVAFSPDGKTLASGSDDHCVRLWNQHTGECLRILQGH 878
Query: 274 VNNRNFVGLS--------VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
+ + + S + LL GSE V V++ R + T G
Sbjct: 879 TSWISSIAFSPVSKAVATLGASDSLLASGSEDQSVRVWETR-------TNLCLKTIQGHS 931
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGK 359
G V SV + G TL +G DG++ + K
Sbjct: 932 NG-VWSVAFNSQG---TTLASGSQDGVIRFWHSK 961
>gi|452950386|gb|EME55844.1| putative WD-40 repeat protein [Amycolatopsis decaplanina DSM 44594]
Length = 1206
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 130/316 (41%), Gaps = 43/316 (13%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIK-----SVLVD 77
WD RT +++ + AV IG F P + AT G +R++++ ++L
Sbjct: 794 WDVASRTPIATLTGHTGAV---IGA-AFSPDGRILATAGTDTTVRMWDVAGRNPTAILTG 849
Query: 78 HP---------------VVAVVDHSKVC---DYYICTPAKLSSLK---WKPGTSGRVLGS 116
H D + V + I TP ++S++ + P GR+L +
Sbjct: 850 HTGQVSGVAFSPDGRTLATGSTDDTAVLWDMNGPILTPYPVTSIQDVVFSP--DGRILAT 907
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDG 176
+G+V +D+ I H V V +S L A+GSDD T+++WD
Sbjct: 908 TSANGMVRLWDVASHNAIATLTGHTSE-VSGVAFSPDGRTL-ATGSDDKTVRLWDVASHS 965
Query: 177 GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV 236
+ T Q S V V F P G +L A G DK +DV + + + GH V
Sbjct: 966 LIAILTGQTSF----VFAVTFSPDGRTL-ATGSDDKTVRLWDVASH-NLIAILTGHTSEV 1019
Query: 237 TYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
+ + F D TL TAG D +LW+V I GH +GL+ G L S
Sbjct: 1020 SRVAFSPDSRTLATAGGDSTARLWDVASHNSIAILTGHTG--PIIGLAFSPDGRTLATAS 1077
Query: 296 ETNQVFVYDVRWGEPV 311
+ V ++DV P+
Sbjct: 1078 DDKTVRLWDVASRNPI 1093
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 102/258 (39%), Gaps = 27/258 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P AT G +R++++ S +P+ + H+ ++ L + P
Sbjct: 731 VAFSPDGRTLATAGDDSTVRLWDVAS---HNPIATLTGHT----------GQVYGLAFSP 777
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR L + D V +D+ + PI H G V +S +L +G+D T+
Sbjct: 778 --DGRTLATAGDDSTVRLWDVASRTPIATLTGHTGA-VIGAAFSPDGRILATAGTDT-TV 833
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+MWD + T V V F P G +L A G D A +D M P+L
Sbjct: 834 RMWDVAGRNPTAILT----GHTGQVSGVAFSPDGRTL-ATGSTDDTAVLWD---MNGPIL 885
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ D L T +G ++LW+V I T GH + + V S
Sbjct: 886 TPYPVTSIQDVVFSPDGRILATTSANGMVRLWDVASHNAIATLTGHTSEVSGVAFSP--D 943
Query: 288 GGLLGCGSETNQVFVYDV 305
G L GS+ V ++DV
Sbjct: 944 GRTLATGSDDKTVRLWDV 961
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 105/267 (39%), Gaps = 25/267 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P AT +R++++ S + + + H+ + +P
Sbjct: 604 VAFSPDSRTLATASRDSTVRLWDVAS---HNSIATLTGHTSDVLAVVFSP---------- 650
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR L +G D V +D+ + RV+ + +S L +GSD T+
Sbjct: 651 --DGRTLATGSDDKTVRLWDVANHHDLIAILTGHTGRVYGLAFSPDGRTLATAGSD-STV 707
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD ++T+ + S V V F P G +L AG D +DV +P+
Sbjct: 708 RLWD--VASHSLIATL--TGHTSFVFWVAFSPDGRTLATAGD-DSTVRLWDVASH-NPIA 761
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH V + F D TL TAG D ++LW+V I T GH +G +
Sbjct: 762 TLTGHTGQVYGLAFSPDGRTLATAGDDSTVRLWDVASRTPIATLTGHTG--AVIGAAFSP 819
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWV 313
G +L V ++DV P +
Sbjct: 820 DGRILATAGTDTTVRMWDVAGRNPTAI 846
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 109/263 (41%), Gaps = 26/263 (9%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
SI + F P + AT +R++++ S + + + H+ +++S +
Sbjct: 892 SIQDVVFSPDGRILATTSANGMVRLWDVAS---HNAIATLTGHT----------SEVSGV 938
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P GR L +G D V +D+ I V++V +S L A+GSD
Sbjct: 939 AFSP--DGRTLATGSDDKTVRLWDVASHSLIAILTGQTSF-VFAVTFSPDGRTL-ATGSD 994
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++WD + T S V V F P +L AG D A +DV
Sbjct: 995 DKTVRLWDVASHNLIAILT----GHTSEVSRVAFSPDSRTLATAG-GDSTARLWDVASH- 1048
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ + + GH + + F D TL TA D ++LW+V I T GH V
Sbjct: 1049 NSIAILTGHTGPIIGLAFSPDGRTLATASDDKTVRLWDVASRNPIATLTGHTGRVFAVTF 1108
Query: 283 SVWRHGGLLGCGSETNQVFVYDV 305
S G L GS+ V ++DV
Sbjct: 1109 SP--DGRTLATGSDDKTVRLWDV 1129
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 34/225 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYICTPAKLSSLKWK 106
+ F P ATG + +R++++ S H ++A++ H+ +++S + +
Sbjct: 980 VTFSPDGRTLATGSDDKTVRLWDVAS----HNLIAILTGHT----------SEVSRVAFS 1025
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P + R L + D +D+ I H G + + +S L A+ SDD T
Sbjct: 1026 PDS--RTLATAGGDSTARLWDVASHNSIAILTGHTGP-IIGLAFSPDGRTL-ATASDDKT 1081
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
+++WD V++ P A+ + V V F P G +L A G DK +DV
Sbjct: 1082 VRLWD--------VASRNPIATLTGHTGRVFAVTFSPDGRTL-ATGSDDKTVRLWDVASH 1132
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRV 266
+ + + GH + + F D TL TA +DG ++ W+ + +RV
Sbjct: 1133 -NSIAILTGHTGYILAVAFSPDGQTLATASSDGTIRFWDPDPARV 1176
>gi|344289193|ref|XP_003416329.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Loxodonta
africana]
Length = 655
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHMVKLWDLTAGKMMSEFTGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V S+ + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSILF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|431914168|gb|ELK15427.1| Katanin p80 WD40-containing subunit B1 [Pteropus alecto]
Length = 695
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTL--VGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|355756818|gb|EHH60426.1| Katanin p80 WD40-containing subunit B1 [Macaca fascicularis]
Length = 650
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHMSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|348572658|ref|XP_003472109.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Cavia
porcellus]
Length = 655
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSDFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|374813828|ref|ZP_09717565.1| NB-ARC domain-containing protein [Treponema primitia ZAS-1]
Length = 1084
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+SS+ + P +G+ + SG D V +DLE I+ EH V SV YS D A
Sbjct: 63 VSSVAYSP--NGKFIVSGSADSTVKIWDLETGREIWTFPEHDST-VKSVSYSP-DGRFIA 118
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD + G+ + T+ S S V + + P G +A+G +D+ +DV
Sbjct: 119 SGSADYTIRIWD--VETGQSLQTL--SGHTSVVNSIAYSPDGR-FLASGSSDRTIRIWDV 173
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + GH + +R+ D T+ + D +KLWN R +RT GH + N
Sbjct: 174 ETGQN-LKTLSGHSLWINSVRYSPDGRTIASGSRDSTVKLWNAETGRELRTLSGHTDEVN 232
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDV 305
+ S G + GS N + ++D
Sbjct: 233 AIRFS--PDGKFIATGSSDNTIKIWDT 257
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 109/273 (39%), Gaps = 26/273 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S I + + P+ A+G + IR++ + + + + +
Sbjct: 311 STGIETLSYSPNGRFIASGCLDNTIRLWEAST-------------GRETQSLVGRSSWVR 357
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+L + P GR + SG D ++ + I H V +V YS D ASG
Sbjct: 358 ALAYSP--DGRYIASGSTDRIIRIRETGSGREILTLRGHTAS-VRAVAYSP-DGKYVASG 413
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+ D T+++WD + + S V V + P G L++ G +D ++ +
Sbjct: 414 AADNTIRIWDAATGRERLIIF----GHSSIVKSVAYSPDGQYLIS-GSSDTTVKVWEPQS 468
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + F GH V + + D +++ D +K+WNV V+ T +GH +
Sbjct: 469 GKE-LWTFTGHFDGVNSVAYSPDGMNIISGAADNTIKIWNVASGSVLATLRGHT--APIL 525
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV 313
LS G + GS V+DV G+ +W+
Sbjct: 526 SLSYSPDGRYIASGSMDGTFRVWDVEGGKEIWI 558
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 11/178 (6%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+ + S+ + P GR + SG D + +D+E + H V S+ YS L
Sbjct: 103 STVKSVSYSP--DGRFIASGSADYTIRIWDVETGQSLQTLSGHTSV-VNSIAYSPDGRFL 159
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+++WD + G+ + T+ S + V + P G + +A+G D +
Sbjct: 160 -ASGSSDRTIRIWD--VETGQNLKTL--SGHSLWINSVRYSPDGRT-IASGSRDSTVKLW 213
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+ + + GH V IRF D + T +D +K+W+ + R +RT GH
Sbjct: 214 NAETGRE-LRTLSGHTDEVNAIRFSPDGKFIATGSSDNTIKIWDTVNGRELRTLTGHT 270
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 109/268 (40%), Gaps = 31/268 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ + P A+G R IRI S ++ + H+ A + ++ + P
Sbjct: 359 LAYSPDGRYIASGSTDRIIRIRETGS---GREILTLRGHT----------ASVRAVAYSP 405
Query: 108 GTSGRVLGSGDYDGVVMEYDL---EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G+ + SG D + +D +++ IF V SV YS L SGS D
Sbjct: 406 --DGKYVASGAADNTIRIWDAATGRERLIIFGHSSI----VKSVAYSPDGQYL-ISGSSD 458
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W+P+ GK + T + V V + P G ++++ G AD ++V
Sbjct: 459 TTVKVWEPQS--GKELWTF--TGHFDGVNSVAYSPDGMNIIS-GAADNTIKIWNVASG-S 512
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ GH + + + + +G+ DG ++W+V + I G+ N GL+
Sbjct: 513 VLATLRGHTAPILSLSYSPDGRYIASGSMDGTFRVWDVEGGKEIWIISGYSNYIK-SGLA 571
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+G + + + ++D G +
Sbjct: 572 YSPNGRFIAATMKNKSIGIFDAATGREL 599
>gi|307592329|ref|YP_003899920.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306985974|gb|ADN17854.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
Length = 1173
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 68/292 (23%), Positives = 126/292 (43%), Gaps = 56/292 (19%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P ++FA+ + + I++++++ T + +L+
Sbjct: 604 LKFSPKGNLFASSSVDKTIKLWDVE-----------------------TGKSIQTLQGHK 640
Query: 108 G--------TSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVL 157
G + G +L S D V +D+ + + IFE+D+ + V +S + VL
Sbjct: 641 GGVWSIAFSSDGCLLASSSEDKTVRLWDVNTGQCLKIFEQDD---TQSLGVAFSPNNQVL 697
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
AS + G + +WD + ++T+Q + R V C+ F P G L A+G +DK +
Sbjct: 698 -ASSHESGKIHLWD--ISTRQYLATLQDNTHR--VECIAFSPDGQKL-ASGSSDKTVKIW 751
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D+ + + GH + + F + L ++G D +KLW++N R ++T +GH
Sbjct: 752 DLTTK-KCLFILQGHTDIIISVSFSPKTNILASSGEDKTVKLWDINTGRCVKTLEGHETR 810
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVR----------WGEPVWVHDFEP 318
V S G +L GS+ V ++D+ W VW F P
Sbjct: 811 VWIVDFS--PDGKILASGSDDQTVKLWDLSKNQCCKTLRGWSNGVWSIAFSP 860
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++S+ + P + R+ S D + +D+E I H RVWSV +S L
Sbjct: 894 RVTSVAFSP--NNRIFASSSEDQTIKIWDVETLQYIKSLQGHT-HRVWSVAFSPDGQTL- 949
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS + +++W+ G+C ++Q R + V F P G ++A+G D+ +D
Sbjct: 950 ASGSQEQVVRLWN--ITTGQCFKSLQGHTHR--IWSVAFSPDGR-ILASGSHDQTIRLWD 1004
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +FD H+ + + F D L ++ +D +K+W+V + ++T +GH +
Sbjct: 1005 IHTG-QCLKIFDEHQDWIWSVVFSPDGRILASSSSDRTIKIWDVFTGQCLKTLRGH--SH 1061
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWG--------EPVWV 313
+++ R +L G + ++D+ G +P W+
Sbjct: 1062 CVYSIAISRDNQILISGGGDQLINLWDINTGICLKSLPKQPKWI 1105
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 40/282 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-----VLVDHPV-VAVVDHSKVCDYYIC 95
+D I + F P ++ A+ G + +++++I + L H V +VD S
Sbjct: 766 TDIIISVSFSPKTNILASSGEDKTVKLWDINTGRCVKTLEGHETRVWIVDFSP------- 818
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEK-KVPIFERDEHGGRRVWSVDYSKGD 154
G++L SG D V +DL K + R G VWS+ +S
Sbjct: 819 --------------DGKILASGSDDQTVKLWDLSKNQCCKTLRGWSNG--VWSIAFSPDG 862
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
L SGS+D T+ +WD G C R V V F P + + A+ D+
Sbjct: 863 HKL-VSGSNDQTLNLWD--ITTGLCRKMWHGHNHR--VTSVAFSP-NNRIFASSSEDQTI 916
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+DV + + GH V + F D TL + + ++LWN+ + ++ +GH
Sbjct: 917 KIWDVETL-QYIKSLQGHTHRVWSVAFSPDGQTLASGSQEQVVRLWNITTGQCFKSLQGH 975
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHD 315
+ V S G +L GS + ++D+ G+ + + D
Sbjct: 976 THRIWSVAFS--PDGRILASGSHDQTIRLWDIHTGQCLKIFD 1015
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 28/227 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G + +R++NI + ++ H+ ++ S+ + P
Sbjct: 940 VAFSPDGQTLASGSQEQVVRLWNITT---GQCFKSLQGHTH----------RIWSVAFSP 986
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR+L SG +D + +D+ + DEH +WSV +S +L AS S D T+
Sbjct: 987 --DGRILASGSHDQTIRLWDIHTGQCLKIFDEHQDW-IWSVVFSPDGRIL-ASSSSDRTI 1042
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG--SSLVAAGCADKKAYAYDVRKMVDP 225
++WD G+C+ T+ R CV + ++ +G D+ +D+ +
Sbjct: 1043 KIWD--VFTGQCLKTL-----RGHSHCVYSIAISRDNQILISGGGDQLINLWDINTGI-C 1094
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+ K + +R D T TA DG +KLW++ ++T K
Sbjct: 1095 LKSLPKQPKWIWAVRLSPDGQTFSTACEDGTIKLWDMQTGDCLKTMK 1141
>gi|376003232|ref|ZP_09781046.1| putative Peptidase C14, caspase catalytic subunit p20 [Arthrospira
sp. PCC 8005]
gi|375328392|emb|CCE16799.1| putative Peptidase C14, caspase catalytic subunit p20 [Arthrospira
sp. PCC 8005]
Length = 1761
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 78/315 (24%), Positives = 138/315 (43%), Gaps = 43/315 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ + + F P + A+G +R++N+K + + H K+ +
Sbjct: 827 NQVNAVAFSPDGQIIASGSSDNTVRLWNLKG----QQIKELSGHEN----------KVWA 872
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P G+++ SG D V ++L K I E H V +V +S + ASGS
Sbjct: 873 VAFSP--DGQIIASGSSDNTVRLWNL-KGQQIKELSGH-ENTVAAVAFSPDGQTI-ASGS 927
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+++W+ R + + S S+V V F P G + +A G AD ++++
Sbjct: 928 SDNTVRLWNLRGE-----QIAELSGHDSSVWAVAFSPDGQT-IAIGSADNTVRLWNLQG- 980
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ + GH + V + F D T+V+A D ++LWN+ IR +GH + V
Sbjct: 981 -EEIAKLSGHEREVLAVAFSPDGQTIVSAAQDNTVRLWNLQGQE-IRELQGHQSGVLAVA 1038
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
S G + GS N V +W + E + +G V++V + GE
Sbjct: 1039 FS--PDGQTIASGSYDNTV---------RLWKPEGEVLREMRGHQGGVNAVAFSPNGE-- 1085
Query: 342 CTLVAGGSDGLLHVF 356
T+V+GG+D L ++
Sbjct: 1086 -TIVSGGADNTLRLW 1099
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 74/318 (23%), Positives = 128/318 (40%), Gaps = 50/318 (15%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P A G +R++N++ + + H + ++ ++
Sbjct: 951 SVWAVAFSPDGQTIAIGSADNTVRLWNLQG----EEIAKLSGHER----------EVLAV 996
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P G+ + S D V ++L+ + I E H V +V +S + ASGS
Sbjct: 997 AFSP--DGQTIVSAAQDNTVRLWNLQGQ-EIRELQGHQSG-VLAVAFSPDGQTI-ASGSY 1051
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK----KAYAYDV 219
D T+++W P G+ + ++ + V V F P G ++V+ G + K +
Sbjct: 1052 DNTVRLWKPE---GEVLREMR--GHQGGVNAVAFSPNGETIVSGGADNTLRLWKPTGEVL 1106
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
R+M GH+ V + D +T+V+A D L+LWN + +GH N
Sbjct: 1107 REM-------RGHQNQVWAVAISPDGETIVSASYDNTLRLWNRMGEAIGNPLRGHQNQVW 1159
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
V S G + GS N +W EP+ VS+V + G
Sbjct: 1160 AVAFS--PDGKTIVSGSYDNTA---------RLWSSQGEPLRQLRGHHHLVSAVAFSPDG 1208
Query: 339 EDECTLVAGGSDGLLHVF 356
E T+V G SD L ++
Sbjct: 1209 E---TIVTGSSDKTLRLW 1223
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 72/311 (23%), Positives = 123/311 (39%), Gaps = 75/311 (24%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ + SG YD V + E +V R GG V +V +S + SG D T+++W
Sbjct: 1043 GQTIASGSYDNTVRLWKPEGEVLREMRGHQGG--VNAVAFSPNGETI-VSGGADNTLRLW 1099
Query: 171 DP--------------------RCDGGKCVSTVQPSASR-----------------SAVC 193
P DG VS + R + V
Sbjct: 1100 KPTGEVLREMRGHQNQVWAVAISPDGETIVSASYDNTLRLWNRMGEAIGNPLRGHQNQVW 1159
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGT 252
V F P G ++V+ G D A + + +P+ GH V+ + F D +T+VT +
Sbjct: 1160 AVAFSPDGKTIVS-GSYDNTARLWSSQG--EPLRQLRGHHHLVSAVAFSPDGETIVTGSS 1216
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW---GE 309
D L+LWN+ + + GH N + V S G ++ G N V +++++ GE
Sbjct: 1217 DKTLRLWNLQGQEIAK-LSGHQNWVDAVAFS--PDGQIIASGGADNTVRLWNLQGQQIGE 1273
Query: 310 ------PVWVHDFEP-----VTAAGSERGFVSSVCWRRVGE--------------DECTL 344
P+ F P V+AA + ++ +++GE D ++
Sbjct: 1274 LQGHQSPIRSVAFSPDGKTIVSAAQDNTVRLWNLQGQQIGELRGNNWFMAVAFSPDGQSI 1333
Query: 345 VAGGSDGLLHV 355
++GG DG++ +
Sbjct: 1334 ISGGGDGIVRL 1344
Score = 42.7 bits (99), Expect = 0.24, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
F GH+ V + F D T+V++ +D ++LWN+ + + I +GH N N V S
Sbjct: 781 FQGHQDAVWAVAFSPDGQTIVSSSSDNTVRLWNL-EGQQIEELRGHQNQVNAVAFS--PD 837
Query: 288 GGLLGCGSETNQVFVYDVRWGE---------PVWVHDFEP---VTAAGS 324
G ++ GS N V +++++ + VW F P + A+GS
Sbjct: 838 GQIIASGSSDNTVRLWNLKGQQIKELSGHENKVWAVAFSPDGQIIASGS 886
>gi|428311036|ref|YP_007122013.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
gi|428252648|gb|AFZ18607.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 1199
Score = 72.0 bits (175), Expect = 5e-10, Method: Composition-based stats.
Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 26/262 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P+ +TG R +R+++ S + A H++ L ++
Sbjct: 878 VKTVAFSPNSQAISTGHKDRTLRVWDANSGTCLREIKA---HTR----------GLPAVA 924
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P +G +L SG D + + L I EH VWS+ +S L AS S D
Sbjct: 925 FHP--NGEILASGSEDTTIKIWSLVDSSCIHVLKEHRNE-VWSLSFSPDGTTL-ASSSFD 980
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++WD GKC+ T++ R V V ++P G+ ++A+G D +D+ + +
Sbjct: 981 HTIKLWD--VSTGKCLQTLE--GHRDRVGAVSYNPQGT-ILASGSEDNTIKLWDIHRG-E 1034
Query: 225 PVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ H V I F D L +A +D LK+W+V + IRT +GH + ++
Sbjct: 1035 CIQTLKEHSARVGAIAFNPDSQLLASASSDQTLKIWDVTAGKCIRTLEGHTG--WVMSVA 1092
Query: 284 VWRHGGLLGCGSETNQVFVYDV 305
+ G + GS + ++D+
Sbjct: 1093 FYPDGRKIASGSCDQTIKIWDI 1114
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 81/332 (24%), Positives = 137/332 (41%), Gaps = 76/332 (22%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD+ R + + + A + +G ++F P + R IRI+ L D +
Sbjct: 734 WDWETRECLQTIT----AHKNWVGSVQFSPDGERLVSASCDRTIRIWR----LADGKCLC 785
Query: 83 VVD-HSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG 141
V+ HS+ + W P GR + S D + +D+E + + H
Sbjct: 786 VLKGHSQW----------IWKAFWSP--DGRQVASCSEDQTIRIWDVETRTCLHTLQGHS 833
Query: 142 GRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQ------------PSA-- 187
R VW + +S L AS S+D T+++W + G C++ +Q P++
Sbjct: 834 SR-VWGISFSPNGQTL-ASCSEDQTIRLW--QVSNGHCIANIQGYTNWVKTVAFSPNSQA 889
Query: 188 --------------SRSAVC------------CVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+ S C V FHP G ++A+G D +
Sbjct: 890 ISTGHKDRTLRVWDANSGTCLREIKAHTRGLPAVAFHPNGE-ILASGSEDT---TIKIWS 945
Query: 222 MVDP--VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+VD + V HR V + F D TL ++ D +KLW+V+ + ++T +GH R+
Sbjct: 946 LVDSSCIHVLKEHRNEVWSLSFSPDGTTLASSSFDHTIKLWDVSTGKCLQTLEGH---RD 1002
Query: 279 FVG-LSVWRHGGLLGCGSETNQVFVYDVRWGE 309
VG +S G +L GSE N + ++D+ GE
Sbjct: 1003 RVGAVSYNPQGTILASGSEDNTIKLWDIHRGE 1034
Score = 67.8 bits (164), Expect = 9e-09, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 122/268 (45%), Gaps = 30/268 (11%)
Query: 11 QAETTNERARC--EWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRI 68
QA +T + R WD N T + A + + + F P+ + A+G I+I
Sbjct: 888 QAISTGHKDRTLRVWDANSGTCLREIK----AHTRGLPAVAFHPNGEILASGSEDTTIKI 943
Query: 69 YNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDL 128
++ LVD + V+ + ++ SL + P G L S +D + +D+
Sbjct: 944 WS----LVDSSCIHVLKEHR---------NEVWSLSFSP--DGTTLASSSFDHTIKLWDV 988
Query: 129 EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
+ + H R V +V Y+ +L ASGS+D T+++WD G+C+ T++ ++
Sbjct: 989 STGKCLQTLEGHRDR-VGAVSYNPQGTIL-ASGSEDNTIKLWD--IHRGECIQTLKEHSA 1044
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTL 247
R V + F+P S L+A+ +D+ +DV + +GH V + F D +
Sbjct: 1045 R--VGAIAFNP-DSQLLASASSDQTLKIWDVTAG-KCIRTLEGHTGWVMSVAFYPDGRKI 1100
Query: 248 VTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ D +K+W++ + + T KGH N
Sbjct: 1101 ASGSCDQTIKIWDIFEGICLNTLKGHTN 1128
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 38/265 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F P +FATG +I ++ + ++ + H+ +P
Sbjct: 587 IAFSPDGQLFATGNANFEIHLWRVSD---RQRLLTLQGHTGWVRKVAFSP---------- 633
Query: 108 GTSGRVLGSGDYDGVVMEYDL---EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G+ L S DG + ++L E + + E + V+ V +S D L A+GS D
Sbjct: 634 --DGQTLVSSSEDGTIKLWNLPSGEYQSTLCESTD----SVYGVTFSP-DGQLLANGSKD 686
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMV 223
+++WD G C+ +Q A+ CV F P G L + G + + + ++ R+ +
Sbjct: 687 CMIRIWDAV--NGNCLQVLQ--GHTGAILCVHFSPDGKYLASCGFDNTIRIWDWETRECL 742
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ H+ V ++F D + LV+A D +++W + D + + KGH ++
Sbjct: 743 QTI---TAHKNWVGSVQFSPDGERLVSASCDRTIRIWRLADGKCLCVLKGH---SQWIWK 796
Query: 283 SVWRHGG--LLGCGSETNQVFVYDV 305
+ W G + C SE + ++DV
Sbjct: 797 AFWSPDGRQVASC-SEDQTIRIWDV 820
Score = 41.6 bits (96), Expect = 0.59, Method: Composition-based stats.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L +G D ++ +D + H G + V +S L + G D+ T+++W
Sbjct: 677 GQLLANGSKDCMIRIWDAVNGNCLQVLQGHTGA-ILCVHFSPDGKYLASCGFDN-TIRIW 734
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP--VLV 228
D + +C+ T+ +A ++ V V+F P G LV+A C D+ + ++ D + V
Sbjct: 735 D--WETRECLQTI--TAHKNWVGSVQFSPDGERLVSASC-DRTIRIW---RLADGKCLCV 786
Query: 229 FDGHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH + + + F D + + D +++W+V + T +GH + G+S
Sbjct: 787 LKGHSQWI-WKAFWSPDGRQVASCSEDQTIRIWDVETRTCLHTLQGH--SSRVWGISFSP 843
Query: 287 HGGLLGCGSETNQVFVYDVRWG 308
+G L SE + ++ V G
Sbjct: 844 NGQTLASCSEDQTIRLWQVSNG 865
>gi|354567841|ref|ZP_08987008.1| serine/threonine protein kinase with WD40 repeats [Fischerella sp.
JSC-11]
gi|353541515|gb|EHC10982.1| serine/threonine protein kinase with WD40 repeats [Fischerella sp.
JSC-11]
Length = 688
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 14/249 (5%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ L SG D + +DL + I H G +W V +S+ L AS S D T++
Sbjct: 406 SDGQKLASGSDDKTIKIWDLATQKEIQTLKGHSGW-IWGVVFSRDGQTL-ASASADQTVK 463
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD G+ + T + ++ V V F P G +L AG DK ++V + +
Sbjct: 464 LWD--LATGREIRTFK--GHKAGVTSVAFSPDGQTLATAGL-DKTVKLWNVETGKE-ICT 517
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH + + F D TL + D +KLWNVN ++ IRT+ GH + + ++
Sbjct: 518 LVGHSGAIASVAFSPDGQTLASGSWDKTIKLWNVNTAKNIRTFTGHSD--LIISVAFSPD 575
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G L GS+ + ++D+ G+ + T + FV + + D LV+G
Sbjct: 576 GTSLASGSKDKTIKLWDLATGKATLT--LKEHTDKVNSIAFVPNTA-KNKSLDTVRLVSG 632
Query: 348 GSDGLLHVF 356
SD + ++
Sbjct: 633 SSDNTIKLW 641
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 19/183 (10%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
A ++S+ + P G+ L + D V +++E I H G + SV +S L
Sbjct: 481 AGVTSVAFSP--DGQTLATAGLDKTVKLWNVETGKEICTLVGHSGA-IASVAFSPDGQTL 537
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+++W+ + K + T + + V F P G+SL A+G DK +
Sbjct: 538 -ASGSWDKTIKLWN--VNTAKNIRTF--TGHSDLIISVAFSPDGTSL-ASGSKDKTIKLW 591
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF---------LDVDTLVTAGTDGCLKLWNVNDSRVIR 268
D+ L H V I F LD LV+ +D +KLW++ + IR
Sbjct: 592 DL-ATGKATLTLKEHTDKVNSIAFVPNTAKNKSLDTVRLVSGSSDNTIKLWDLKTGKEIR 650
Query: 269 TYK 271
T K
Sbjct: 651 TLK 653
>gi|428215833|ref|YP_007088977.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
gi|428004214|gb|AFY85057.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 717
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 138/321 (42%), Gaps = 37/321 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S I + P+ + A+G I+++N+++ + + HS D +P
Sbjct: 89 SSRIYSVAISPNGRLAASGSNDNTIKLWNLET---GEELGILSGHSDWVDSVAFSP---- 141
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEK----KVPIFERDEHGGRR-VWSVDYSKGDPV 156
GR+L SG D + + + K+ ++ G R V SV +S D
Sbjct: 142 --------DGRLLASGSGDATLKLWTIHPENSPKIASLKQTLTGHSRWVTSVTFSP-DSQ 192
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L SGS D T+++W+ + G+ V T++ V V F P G LV+ G + K +
Sbjct: 193 LLVSGSKDNTIKLWN--IETGEDVRTLE--GHYDWVYSVAFSPDGKQLVSGGDSTVKLWN 248
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
D + + F GHR V + F D + + DG +KLW+V+D R I T GH
Sbjct: 249 LDTGEELQ---TFTGHRDWVYSVAFSPDGQQIASGSEDGTIKLWSVSDPRAIATLTGHTA 305
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
N V S+ G LL S + V +++V G+ + D + +VSS+
Sbjct: 306 GVNAVTFSL--EGRLLISASADDTVQLWNVETGK---IPDDSALKILRGHGEWVSSLA-- 358
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
+ D LV+G D L ++
Sbjct: 359 -IAPDGRRLVSGSGDRTLKLW 378
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 121/254 (47%), Gaps = 25/254 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + SG DG+V + L V H VWSV +S D L ASGS D T+++W
Sbjct: 446 GSRVASGSEDGLVKIWSLNSGVLAILLSGHT-EGVWSVTFSP-DSKLLASGSGDETIKIW 503
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ + GK + T++ + R V V HP ++A+G AD+ +++ V+ + +
Sbjct: 504 NLQT--GKEIRTLRGHSYR--VDAVVMHP-KLPILASGSADETIKLWNLDTGVE-ISTLE 557
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V+ + F D ++L ++ DG +KLWN N S + T +GH + N + S G
Sbjct: 558 GHSDAVSSVLFSPDGESLASSSMDGTIKLWNWNASEELGTLEGHADAVNSISFS--PTGK 615
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
+ G E + ++++ ++ A SE V+SV + R D L +G +
Sbjct: 616 TIASGCEDGTIKLWNLL------TYEERGTLLAHSEP--VNSVAFSR---DGYQLASGSA 664
Query: 350 DGLL---HVFVGKK 360
D L H+ GK+
Sbjct: 665 DSTLKIWHLRTGKE 678
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 24/237 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+G I+I+N+++ + + HS D + P KL
Sbjct: 482 VTFSPDSKLLASGSGDETIKIWNLQT---GKEIRTLRGHSYRVDAVVMHP-KLP------ 531
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+L SG D + ++L+ V I + H V SV +S L AS S DGT+
Sbjct: 532 -----ILASGSADETIKLWNLDTGVEISTLEGHS-DAVSSVLFSPDGESL-ASSSMDGTI 584
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ + + + T++ A AV + F P G + +A+GC D +++ +
Sbjct: 585 KLWN--WNASEELGTLEGHAD--AVNSISFSPTGKT-IASGCEDGTIKLWNLLTYEERGT 639
Query: 228 VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ H + V + F D L + D LK+W++ + R + GH N N V S
Sbjct: 640 LL-AHSEPVNSVAFSRDGYQLASGSADSTLKIWHLRTGKEFRMFSGHSNWVNAVAFS 695
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 136/340 (40%), Gaps = 54/340 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + +G I+++NI++ V + H +P
Sbjct: 185 VTFSPDSQLLVSGSKDNTIKLWNIET---GEDVRTLEGHYDWVYSVAFSP---------- 231
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGSDDG 165
G+ L SG D V ++L+ E G R W SV +S D ASGS+DG
Sbjct: 232 --DGKQLVSGG-DSTVKLWNLDTGE---ELQTFTGHRDWVYSVAFSP-DGQQIASGSEDG 284
Query: 166 TMQMW---DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRK 221
T+++W DPR ++T+ + + V V F G L++A D + + + K
Sbjct: 285 TIKLWSVSDPRA-----IATL--TGHTAGVNAVTFSLEGRLLISASADDTVQLWNVETGK 337
Query: 222 MVD--PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D + + GH + V+ + D LV+ D LKLW++ +RT G +
Sbjct: 338 IPDDSALKILRGHGEWVSSLAIAPDGRRLVSGSGDRTLKLWSLETGEELRTLGGDAEWVD 397
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--------WVHDFE-----PVTAAGSE 325
V + G ++G GS + +++ GE + WV D A+GSE
Sbjct: 398 SVVFT--PDGQMVGSGSGGDTA-KWNLHSGEELRSLSGISSWVEDIAVSPDGSRVASGSE 454
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKKPLSA 365
G V W L++G ++G+ V L A
Sbjct: 455 DGLVK--IWSLNSGVLAILLSGHTEGVWSVTFSPDSKLLA 492
>gi|296231210|ref|XP_002807787.1| PREDICTED: LOW QUALITY PROTEIN: katanin p80 WD40-containing subunit
B1 [Callithrix jacchus]
Length = 656
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFLGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|3005599|gb|AAC09328.1| katanin p80 subunit [Homo sapiens]
Length = 655
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GLKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDGTIRFWD--------LEKFQVVSRIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|22128703|gb|AAM92815.1| putative microtubule-severing protein subunit [Oryza sativa
Japonica Group]
Length = 866
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV + + ++GA G+ GT+++WD D K V T + RS+ ++FHPFG
Sbjct: 67 VESVSFDSSEAMIGA-GASSGTIKIWD--VDEAKVVRTF--TGHRSSCASLDFHPFGE-F 120
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
A+G +D +D+RK + + GH + + +RF D +V+ G+D +K+W++
Sbjct: 121 FASGSSDTNMKIWDMRKK-GCIHTYKGHTRRIDVLRFTPDGRWIVSGGSDNSVKIWDLTA 179
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
+++ ++ H N L H LL GS V +D + FE + ++G
Sbjct: 180 GKLLHDFRNHEGPINC--LDFHPHEFLLATGSADKTVKFWD--------LETFELIGSSG 229
Query: 324 SERGFVSSVCWRRVGE 339
E V S+ + + G+
Sbjct: 230 PEASVVRSMTFNKDGK 245
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 39/190 (20%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V CV+F S ++ G D+K+ + G V + F +
Sbjct: 32 AHASDVNCVKFGRKTSRILITGGEDQKSLS--------------GLTSPVESVSFDSSEA 77
Query: 247 LVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
++ AG + G +K+W+V++++V+RT+ GH + L G GS + ++D+
Sbjct: 78 MIGAGASSGTIKIWDVDEAKVVRTFTGH--RSSCASLDFHPFGEFFASGSSDTNMKIWDM 135
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG-----------LLH 354
R + +H + +G + R D +V+GGSD LLH
Sbjct: 136 R--KKGCIHTY---------KGHTRRIDVLRFTPDGRWIVSGGSDNSVKIWDLTAGKLLH 184
Query: 355 VFVGKKKPLS 364
F + P++
Sbjct: 185 DFRNHEGPIN 194
>gi|332704969|ref|ZP_08425055.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332356321|gb|EGJ35775.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 560
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 22/247 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D ++ ++L P+ H V ++ +S GD SGS D T+++W
Sbjct: 329 GQTLVSGGDDRMIKTWNLNTGKPLSTLTGHQ-DTVATLAFS-GDSKTLVSGSWDNTIKIW 386
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ GK + T+ + +V VE P G +LV+ G D +++ V +F
Sbjct: 387 --QLPKGKLLHTL--TGHLGSVNSVEISPDGKTLVS-GSQDTTIRLWNL-ATGKLVRIFK 440
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH ++V+ + LD TL + G DG ++LWN+N ++ RT GH + V ++ R G
Sbjct: 441 GHSRSVSSVAISLDGKTLASGGGDGTIRLWNLNTGKLTRTLTGHTDGVWSVTMT--RDGS 498
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
L GS + ++D+R + + G+V +V + +D TLV+GG
Sbjct: 499 TLISGSWDKTIKLWDMR--------SAQLKSTLNGHSGYVVAVA---LSQDGQTLVSGGW 547
Query: 350 DGLLHVF 356
D + ++
Sbjct: 548 DQQIRIW 554
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 20/202 (9%)
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
++ ASG DGT+ +W+ G+ + T + AV V P G +LV+ G D+
Sbjct: 288 LMAASGHSDGTISLWN--LSTGQLIRTWRGHG--GAVNAVAISPDGQTLVSGG-DDRMIK 342
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+++ P+ GH+ TV + F D TLV+ D +K+W + +++ T GH+
Sbjct: 343 TWNLNTG-KPLSTLTGHQDTVATLAFSGDSKTLVSGSWDNTIKIWQLPKGKLLHTLTGHL 401
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCW 334
+ N V +S G L GS+ + ++++ G+ V + +G SV
Sbjct: 402 GSVNSVEIS--PDGKTLVSGSQDTTIRLWNLATGKLVRIF-----------KGHSRSVSS 448
Query: 335 RRVGEDECTLVAGGSDGLLHVF 356
+ D TL +GG DG + ++
Sbjct: 449 VAISLDGKTLASGGGDGTIRLW 470
>gi|432119380|gb|ELK38458.1| Katanin p80 WD40-containing subunit B1 [Myotis davidii]
Length = 655
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTL--VGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V S+ + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSILF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|425461755|ref|ZP_18841229.1| Genome sequencing data, contig C310 (fragment) [Microcystis
aeruginosa PCC 9808]
gi|389825343|emb|CCI24980.1| Genome sequencing data, contig C310 (fragment) [Microcystis
aeruginosa PCC 9808]
Length = 812
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++ +S V+ ++ DY++
Sbjct: 484 TDWICSVAFSPDGKTLISGSGDQTIRLWSGES----GEVIKILQEK---DYWVLLYQVAV 536
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S +G+++ S +D ++ +D++ EH +RVW++ +S +L SG
Sbjct: 537 S------ANGQLIASTSHDNIIKLWDIKTDEKYTFSPEHQ-KRVWAIAFSPNSQML-VSG 588
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F G L+A G D+ + +
Sbjct: 589 SGDNSVKLWSVPR---GFCLKTFEEH--QAWVLSVTFSLDGK-LIATGSEDRTIKLWSIE 642
Query: 221 K-MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +K+W V D R+I +++GH +
Sbjct: 643 DDMTQSLRTFKGHQGRIWSVVFSPDGQRLASSSDDQTVKVWQVKDGRLINSFEGHKSWVW 702
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV GE
Sbjct: 703 SVAFS--PDGKLLASGGDDATIRIWDVEIGE 731
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 16/181 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQM 169
G+++ +G D + + +E + R G + R+WSV +S L AS SDD T+++
Sbjct: 624 GKLIATGSEDRTIKLWSIEDDMTQSLRTFKGHQGRIWSVVFSPDGQRL-ASSSDDQTVKV 682
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + G+ +++ + +S V V F P G L+A+G D +DV ++ + +
Sbjct: 683 W--QVKDGRLINSFE--GHKSWVWSVAFSPDGK-LLASGGDDATIRIWDV-EIGELHQLL 736
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV------NDSRVIRTYKGHVNNRNFVGL 282
H K+V + F + +TL +AG D +KLWN+ N R R Y+ N + GL
Sbjct: 737 REHTKSVRSVCFSPNGNTLASAGEDETIKLWNLKTGECQNTLRSPRLYE-QTNIKGVEGL 795
Query: 283 S 283
+
Sbjct: 796 N 796
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 193 LLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIIKIW 251
Query: 171 DPRCDGG-KCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
D C S S A + V F S +A G DK + V + + +
Sbjct: 252 SITTDLSINCHSLPHHSQKHHAPIRSVTFSA-DSQFLATGSEDKTIKIWSV-ETGECLHT 309
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+GH++ V + F L+ +G+ D +K+W+V+ + + T GH + V S
Sbjct: 310 LEGHQERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQDWVWQVAFS--SD 367
Query: 288 GGLLGCGSETNQVFVYDVRWGE 309
G LL GS + ++ + GE
Sbjct: 368 GQLLASGSGDKTIKIWSIIEGE 389
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 88 KVCDYYICTP---AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR 144
K + Y +P ++ ++ + P + V GSGD V + + + + +EH
Sbjct: 558 KTDEKYTFSPEHQKRVWAIAFSPNSQMLVSGSGD--NSVKLWSVPRGFCLKTFEEHQAW- 614
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV +S D L A+GS+D T+++W D + + T + R + V F P G L
Sbjct: 615 VLSVTFSL-DGKLIATGSEDRTIKLWSIEDDMTQSLRTFKGHQGR--IWSVVFSPDGQRL 671
Query: 205 VAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
A+ D+ + V+ ++++ F+GH+ V + F D L + G D +++W+V
Sbjct: 672 -ASSSDDQTVKVWQVKDGRLINS---FEGHKSWVWSVAFSPDGKLLASGGDDATIRIWDV 727
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ + + H + V S +G L E + +++++ GE
Sbjct: 728 EIGELHQLLREHTKSVRSVCFS--PNGNTLASAGEDETIKLWNLKTGE 773
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 9/175 (5%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+ L +G D + + +E + + H RV V +S +L ASGS D T+++W
Sbjct: 285 QFLATGSEDKTIKIWSVETGECLHTLEGHQ-ERVGGVTFSPNGQLL-ASGSADKTIKIWS 342
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK-MVDPVLVFD 230
D GKC+ T+ + + V V F G L+A+G DK + + + +
Sbjct: 343 --VDTGKCLHTL--TGHQDWVWQVAFSSDGQ-LLASGSGDKTIKIWSIIEGEYQNIDTLT 397
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
GH + I F D + + D L+LW+V ++ ++G+ N + + S
Sbjct: 398 GHESWIWSIAFSPDGQYIASGSEDFTLRLWSVKTRECLQCFRGYGNRLSSITFST 452
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 22/232 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I + F ATG + I+I+++++ H + H + +P
Sbjct: 275 IRSVTFSADSQFLATGSEDKTIKIWSVETGECLHTLEG---HQERVGGVTFSP------- 324
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+G++L SG D + + ++ + H VW V +S D L ASGS D
Sbjct: 325 -----NGQLLASGSADKTIKIWSVDTGKCLHTLTGHQDW-VWQVAFS-SDGQLLASGSGD 377
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W + + T+ + S + + F P G +A+G D + V K +
Sbjct: 378 KTIKIWSIIEGEYQNIDTL--TGHESWIWSIAFSPDGQ-YIASGSEDFTLRLWSV-KTRE 433
Query: 225 PVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ F G+ ++ I F D +++ D L+LW++ + + ++ GH +
Sbjct: 434 CLQCFRGYGNRLSSITFSTDSQYILSGSIDRSLRLWSIKNHKCLQQINGHTD 485
>gi|434398324|ref|YP_007132328.1| WD-40 repeat-containing protein [Stanieria cyanosphaera PCC 7437]
gi|428269421|gb|AFZ35362.1| WD-40 repeat-containing protein [Stanieria cyanosphaera PCC 7437]
Length = 1190
Score = 71.2 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 74/313 (23%), Positives = 138/313 (44%), Gaps = 42/313 (13%)
Query: 9 QPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRI 68
Q A ++N+R WD N + ++++ + F P ++ A+ I +K+R+
Sbjct: 738 QMLASSSNDRTVRLWDLNTGECLKIFRGH----ANAVFAVTFCPQGNLLASSSIGQKVRL 793
Query: 69 YNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDL 128
+NI++ + HS V ++S+ + P G +L SG YD V +D+
Sbjct: 794 WNIET---GECLKVFRGHSNV----------VNSVTFNP--QGNILASGSYDQTVKLWDI 838
Query: 129 EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
F+ + + SV +S L SG D +++WD + GK V T+ +
Sbjct: 839 -NTYQCFKTWQGYSNQALSVTFSLDGQTL-VSGGHDQRIRLWD--INTGKVVKTLHDHTN 894
Query: 189 RSAVCCVEFHPFGSS--LVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFLDV 244
V V F P G + ++A+G ADK +D+ K++ + GH + I F
Sbjct: 895 --WVFSVAFSPLGKNKEILASGSADKTVKLWDLSTGKVIKTLY---GHEAAIRSIAFSPF 949
Query: 245 DT--------LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
+ L + D ++LW+VN+ ++++T +GH + ++ G +L S
Sbjct: 950 TSKKGSEGWLLASGSEDRTIRLWDVNNGQILKTLRGHQAEIWSIAFNL--DGQILASASF 1007
Query: 297 TNQVFVYDVRWGE 309
V ++D+ GE
Sbjct: 1008 DKTVKLWDIYTGE 1020
Score = 68.2 bits (165), Expect = 6e-09, Method: Composition-based stats.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L +GD G ++ + PI H V S+ +S L ASGS D T ++W
Sbjct: 569 GQYLAAGDTKGDIILRRITDGQPILSFKGHHSWVV-SLAFSPDGNTL-ASGSCDCTAKLW 626
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G+C+ T+ V V F P G+ ++A+GC D + + V + VF
Sbjct: 627 D--VNTGECLHTL--DEHEQEVWSVAFGPDGT-ILASGCDDHQTRLWSV-STGKCLKVFQ 680
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F LD L++ D +KLW++N + + ++GH + V LS G
Sbjct: 681 GHLGEVLSVAFSLDGQMLISGSHDNTIKLWDINTQKCKQVFQGHEDGVRSVSLS--PDGQ 738
Query: 290 LLGCGSETNQVFVYDVRWGE 309
+L S V ++D+ GE
Sbjct: 739 MLASSSNDRTVRLWDLNTGE 758
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 70/299 (23%), Positives = 115/299 (38%), Gaps = 35/299 (11%)
Query: 21 CEWDFNLR------TTVSSSSSPNAAVSDSIG---VIEFDPSDSVFATGGIARKIRIYNI 71
C W +LR S+ + +++ G + F P A G I + I
Sbjct: 527 CVWQADLRQARLHQVNFQSADLSKSVFAENFGGIWSVAFSPDGQYLAAGDTKGDIILRRI 586
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
P+++ H + + SL + P G L SG D +D+
Sbjct: 587 TD---GQPILSFKGHH----------SWVVSLAFSP--DGNTLASGSCDCTAKLWDVNTG 631
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
+ DEH + VWSV + +L ASG DD ++W GKC+ Q
Sbjct: 632 ECLHTLDEHE-QEVWSVAFGPDGTIL-ASGCDDHQTRLWS--VSTGKCLKVFQ--GHLGE 685
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V V F G L++ G D +D+ VF GH V + D L ++
Sbjct: 686 VLSVAFSLDGQMLIS-GSHDNTIKLWDINTQ-KCKQVFQGHEDGVRSVSLSPDGQMLASS 743
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
D ++LW++N ++ ++GH N ++ G LL S +V ++++ GE
Sbjct: 744 SNDRTVRLWDLNTGECLKIFRGHAN--AVFAVTFCPQGNLLASSSIGQKVRLWNIETGE 800
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 66/275 (24%)
Query: 111 GRVLGSGDYDGVVMEYDL--EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
G++L SG +D + +D+ +K +F+ E G R SV S +L AS S+D T++
Sbjct: 695 GQMLISGSHDNTIKLWDINTQKCKQVFQGHEDGVR---SVSLSPDGQML-ASSSNDRTVR 750
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + G+C+ + A+ AV V F P G+ L+A+ +K +++ + + + V
Sbjct: 751 LWD--LNTGECLKIFRGHAN--AVFAVTFCPQGN-LLASSSIGQKVRLWNI-ETGECLKV 804
Query: 229 FDGHRKTVTYIRF-------------------------------------------LDVD 245
F GH V + F LD
Sbjct: 805 FRGHSNVVNSVTFNPQGNILASGSYDQTVKLWDINTYQCFKTWQGYSNQALSVTFSLDGQ 864
Query: 246 TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS-VWRHGGLLGCGSETNQVFVYD 304
TLV+ G D ++LW++N +V++T H N V S + ++ +L GS V ++D
Sbjct: 865 TLVSGGHDQRIRLWDINTGKVVKTLHDHTNWVFSVAFSPLGKNKEILASGSADKTVKLWD 924
Query: 305 VRWGEPV---WVHD-------FEPVTAAGSERGFV 329
+ G+ + + H+ F P T+ G++
Sbjct: 925 LSTGKVIKTLYGHEAAIRSIAFSPFTSKKGSEGWL 959
Score = 38.1 bits (87), Expect = 6.0, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 45/277 (16%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDS-------VFATGGIARKIRIYNIKSVL 75
WD + + + AA+ I F P S + A+G R IR+++
Sbjct: 923 WDLSTGKVIKTLYGHEAAIRS----IAFSPFTSKKGSEGWLLASGSEDRTIRLWD----- 973
Query: 76 VDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF 135
V++ ++ A++ S+ + G++L S +D V +D+ +
Sbjct: 974 --------VNNGQILKTLRGHQAEIWSIAFN--LDGQILASASFDKTVKLWDIYTGECLT 1023
Query: 136 ERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC-- 193
+ H VWS+ +S + L A+ S D T++ W+ G+C Q R +
Sbjct: 1024 TLNGHESW-VWSIAFSPDNKSL-ATTSADQTIRFWN--VASGEC----QRIWRRDEIGNS 1075
Query: 194 -CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAG 251
V F P G ++A+ D K + + GH + I F D TLV++
Sbjct: 1076 QLVAFSPNGQ-IIASCNQDHKIRLWQLNTE-KCFKALAGHTALINSIAFSPDGHTLVSSS 1133
Query: 252 TDGCLKLWNVNDSRVIRTYKG-----HVNNRNFVGLS 283
D +KLW++ ++T K +N + GLS
Sbjct: 1134 EDETIKLWDLKSGECLKTLKSKNPYEEMNIQGVTGLS 1170
>gi|145552033|ref|XP_001461693.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429528|emb|CAK94320.1| unnamed protein product [Paramecium tetraurelia]
Length = 1478
Score = 71.2 bits (173), Expect = 7e-10, Method: Composition-based stats.
Identities = 87/354 (24%), Positives = 147/354 (41%), Gaps = 55/354 (15%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-------------VLV-----DHPVVAV 83
S+S+ + F P V A+G + IRI+ + + VL D ++A
Sbjct: 912 SNSVYSVCFSPDSKVLASGSADKSIRIWEVDTRQQTAKFDGHTNYVLSICFSPDGTILAS 971
Query: 84 VDHSKVCDYYICTPAKLS----------SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVP 133
+ K + K++ S+ + P G L SG D + +D++
Sbjct: 972 CSNDKSIRLWDQKGQKITKFDGHTSYVLSICFSP--DGTTLASGSDDKSIHLWDIKTGKQ 1029
Query: 134 IFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
+ DEH V+S+ +S L AS S+D ++ +WD C G+ + + S
Sbjct: 1030 KAKLDEHTS-TVFSISFSPDGTQL-ASCSNDKSICLWD--CITGQLQTKLTGHTSNIHSV 1085
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGT 252
C F P+G++LV +G D+ + ++ +L DGH V + F D TL +
Sbjct: 1086 C--FSPYGTTLV-SGSEDQSVRLWSIQTN-QQILKMDGHNSAVYSVCFSPDGATLASGSD 1141
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
D ++LW+VN + GH + V S +G LL G N V +++V+ G
Sbjct: 1142 DNSIRLWDVNTGQSKFNLHGHTSGVLSVCFS--PNGSLLASGGNDNSVRLWNVKTG---- 1195
Query: 313 VHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG---LLHVFVGKKKPL 363
E +V SVC+ D TL +G D L +V G+++ +
Sbjct: 1196 ----EQQKKLNGHTSYVQSVCF---SSDSTTLASGSYDNSIRLWNVNTGQQQAI 1242
Score = 64.7 bits (156), Expect = 6e-08, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG D V + ++ I + D H V+SV +S L ASGSDD ++++W
Sbjct: 1091 GTTLVSGSEDQSVRLWSIQTNQQILKMDGHNSA-VYSVCFSPDGATL-ASGSDDNSIRLW 1148
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G+ S S V V F P G SL+A+G D ++V K + +
Sbjct: 1149 D--VNTGQ--SKFNLHGHTSGVLSVCFSPNG-SLLASGGNDNSVRLWNV-KTGEQQKKLN 1202
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D TL + D ++LWNVN + GH + + + S +G
Sbjct: 1203 GHTSYVQSVCFSSDSTTLASGSYDNSIRLWNVNTGQQQAILDGHTSYVSQICFS--PNGT 1260
Query: 290 LLGCGSETNQVFVYDVR 306
LL S N + ++D+R
Sbjct: 1261 LLASASYDNTIRLWDIR 1277
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 82/352 (23%), Positives = 145/352 (41%), Gaps = 68/352 (19%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS----VLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
I F ++ A G + IR++NIK+ + +D V CD + + ++ S+
Sbjct: 709 ICFSSDSTIIAFGSYDKSIRLWNIKTGQQILKLDGHTSTVYSVCFSCDGKLASGSEDQSV 768
Query: 104 K-WKPGT---------------------SGRVLGSGDYDGVVMEYDLE--KKVPIFERDE 139
+ W T G L SG D + +D+ ++ IF +
Sbjct: 769 RLWNIETGYQQQKMDGHNSIVQSVCFSHDGTTLASGSNDKTIRLWDVNTGQQKSIFVGHQ 828
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSA----SRSAVCCV 195
+ V+SV +S D L ASGS D ++++WD ++T Q +A ++V V
Sbjct: 829 NS---VYSVCFSH-DGKLLASGSADNSIRLWD--------INTKQQTAIFVGHSNSVYSV 876
Query: 196 EFHPFGSSLVAAGCADK--KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGT 252
F S +A+G ADK + + D R+ FDGH +V + F D L +
Sbjct: 877 CFSS-DSKALASGSADKSIRLWEVDTRQQTAK---FDGHSNSVYSVCFSPDSKVLASGSA 932
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
D +++W V+ + + GH N + + G +L S + ++D +
Sbjct: 933 DKSIRIWEVDTRQQTAKFDGHTN--YVLSICFSPDGTILASCSNDKSIRLWDQKG----- 985
Query: 313 VHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF---VGKKK 361
+ +T +V S+C+ D TL +G D +H++ GK+K
Sbjct: 986 ----QKITKFDGHTSYVLSICF---SPDGTTLASGSDDKSIHLWDIKTGKQK 1030
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 72/336 (21%), Positives = 136/336 (40%), Gaps = 62/336 (18%)
Query: 12 AETTNERARCEWDF---NLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRI 68
A +N+++ C WD L+T ++ +S +I + F P + +G + +R+
Sbjct: 1053 ASCSNDKSICLWDCITGQLQTKLTGHTS-------NIHSVCFSPYGTTLVSGSEDQSVRL 1105
Query: 69 YNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK----------WKPGT--------- 109
++I++ + ++ + H+ Y +C ++L W T
Sbjct: 1106 WSIQT---NQQILKMDGHNSAV-YSVCFSPDGATLASGSDDNSIRLWDVNTGQSKFNLHG 1161
Query: 110 ------------SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+G +L SG D V ++++ + + H V SV +S L
Sbjct: 1162 HTSGVLSVCFSPNGSLLASGGNDNSVRLWNVKTGEQQKKLNGHTSY-VQSVCFSSDSTTL 1220
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSA----SRSAVCCVEFHPFGSSLVAAGCADKK 213
ASGS D ++++W+ V+T Q A S V + F P G+ L+A+ D
Sbjct: 1221 -ASGSYDNSIRLWN--------VNTGQQQAILDGHTSYVSQICFSPNGT-LLASASYDNT 1270
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+D+R +FD +T D TL + + +++ NVN GH
Sbjct: 1271 IRLWDIRTQYQKQKLFDHTSSVLTASLSTDYTTLASGSDNNSIRVQNVNTGYQQAILDGH 1330
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ + V S +G LL S N + ++D++ G+
Sbjct: 1331 ASYVSQVCFS--PNGTLLASASYDNTIRLWDIQTGQ 1364
>gi|75911051|ref|YP_325347.1| WD-40 repeat-containing serine/threonine protein kinase [Anabaena
variabilis ATCC 29413]
gi|75704776|gb|ABA24452.1| serine/threonine protein kinase with WD40 repeats [Anabaena
variabilis ATCC 29413]
Length = 676
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 134/307 (43%), Gaps = 38/307 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P+ A+G + I+++N+K+ + + HS +P
Sbjct: 394 VNSVAFSPNGEFLASGSDDKTIKVWNLKT---KQKIHTLPGHSGWVWAIAFSP------- 443
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G+ L S D + ++L I H + V SV +S L ASGS D
Sbjct: 444 -----DGKTLVSAGADKTIKLWNLATGTEIRTLKGHS-QGVASVAFSPDGKTL-ASGSLD 496
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W+ GK + T+ S + V V F P G +L A+G DK +++ +
Sbjct: 497 KTIKLWN--LATGKEIRTL--SEHSNVVANVAFSPDGKTL-ASGSWDKTIKLWNL--TTN 549
Query: 225 PVL-VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
V +GH V + F D TL +A D ++LWN+ + IRT KGH + N V +
Sbjct: 550 KVFRTLEGHSDLVMSVVFNPDGKTLASASKDKTIRLWNLAAGKTIRTLKGHSDKVNSV-V 608
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDEC 342
V R+ +L GS N + ++++ G E + + G++ SV + D
Sbjct: 609 YVPRNSTVLASGSNDNTIKLWNLTTG--------EIIRTLKRDSGYIYSVA---ISPDGR 657
Query: 343 TLVAGGS 349
L +GGS
Sbjct: 658 NLASGGS 664
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
S V V F P G +A+G DK +++ K + GH V I F D TLV
Sbjct: 392 SDVNSVAFSPNGE-FLASGSDDKTIKVWNL-KTKQKIHTLPGHSGWVWAIAFSPDGKTLV 449
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+AG D +KLWN+ IRT KGH V S G L GS + ++++ G
Sbjct: 450 SAGADKTIKLWNLATGTEIRTLKGHSQGVASVAFS--PDGKTLASGSLDKTIKLWNLATG 507
Query: 309 EPV 311
+ +
Sbjct: 508 KEI 510
>gi|425455607|ref|ZP_18835327.1| Genome sequencing data, contig C309 [Microcystis aeruginosa PCC
9807]
gi|389803520|emb|CCI17593.1| Genome sequencing data, contig C309 [Microcystis aeruginosa PCC
9807]
Length = 1108
Score = 71.2 bits (173), Expect = 7e-10, Method: Composition-based stats.
Identities = 78/269 (28%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G+ L SG +D + +++E I H G VWSV++S + SGSDDGT+++
Sbjct: 709 NGKTLVSGSWDNTIKLWNVETGQEILTLKGHEGP-VWSVNFSPDEGKTLVSGSDDGTIKL 767
Query: 170 WDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
W+ V VQ V VEF P + +G D +DV K + +
Sbjct: 768 WN--------VEIVQTLKGHDDLVNSVEFSPDEGKTLVSGSDDGTIKLWDV-KTGEEIRT 818
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
G+ V + F D TLV+ D + LWNV + I T K H V S +
Sbjct: 819 LKGNDYPVRSVNFSPDGKTLVSGSDDKTIILWNVKTGQKIHTLKEHNGLVRSVNFS--PN 876
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G L GS + ++DV+ G+ +H FE V SV + G+ TLV+G
Sbjct: 877 GETLVSGSWDGTIKLWDVKTGQK--IHTFEV-------HHRVRSVNFSPNGK---TLVSG 924
Query: 348 GSDG-----------LLHVFVGKKKPLSA 365
+D LH F G K P+ +
Sbjct: 925 SNDKNIILWDVEKRQKLHTFEGHKGPVRS 953
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 72/249 (28%), Positives = 109/249 (43%), Gaps = 42/249 (16%)
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H G V SV +S L SGSDD T+++W+ + G+ + T++ S V V F P
Sbjct: 570 HNGS-VNSVSFSSDGKTL-VSGSDDNTIKLWN--VETGQEIRTLK--GHDSGVYSVNFSP 623
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLK 257
G +LV+ G DK +DV + + GH V + F + TLV+ D +K
Sbjct: 624 DGKTLVS-GSDDKTIILWDV-ETGQKLHTLKGHNGPVYSVNFSPDEGKTLVSGSGDKTIK 681
Query: 258 LWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE-------- 309
LWNV + RT KGH + V S +G L GS N + +++V G+
Sbjct: 682 LWNVEKPQEPRTLKGHNSRVRSVNFS--HNGKTLVSGSWDNTIKLWNVETGQEILTLKGH 739
Query: 310 --PVWVHDFEP----VTAAGSERGFVS----SVCWRRVGEDEC------------TLVAG 347
PVW +F P +GS+ G + + G D+ TLV+G
Sbjct: 740 EGPVWSVNFSPDEGKTLVSGSDDGTIKLWNVEIVQTLKGHDDLVNSVEFSPDEGKTLVSG 799
Query: 348 GSDGLLHVF 356
DG + ++
Sbjct: 800 SDDGTIKLW 808
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P +G + I ++N+K+ + + +H+ + + S+ + P
Sbjct: 829 VNFSPDGKTLVSGSDDKTIILWNVKT---GQKIHTLKEHNGL----------VRSVNFSP 875
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+G L SG +DG + +D++ I + H RV SV++S L SGS+D +
Sbjct: 876 --NGETLVSGSWDGTIKLWDVKTGQKIHTFEVH--HRVRSVNFSPNGKTL-VSGSNDKNI 930
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+WD + + + T + + V V F P G +LV+ G DK ++V + + +
Sbjct: 931 ILWD--VEKRQKLHTFE--GHKGPVRSVNFSPNGETLVS-GSYDKTIKLWNV-ETGEEIH 984
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH---VNNRNF 279
F GH V + F + TLV+ D +KLWNV + IRT GH V + NF
Sbjct: 985 TFYGHDGPVRSVNFSPNGKTLVSGSDDKTIKLWNVKTGKEIRTLHGHDSRVRSVNF 1040
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P+ +G I+++++K+ H V H ++ S+ + P
Sbjct: 871 VNFSPNGETLVSGSWDGTIKLWDVKTGQKIHTFE--VHH------------RVRSVNFSP 916
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+G+ L SG D ++ +D+EK+ + + H G V SV++S L SGS D T+
Sbjct: 917 --NGKTLVSGSNDKNIILWDVEKRQKLHTFEGHKGP-VRSVNFSPNGETL-VSGSYDKTI 972
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ + G+ + T V V F P G +LV+ G DK ++V K +
Sbjct: 973 KLWN--VETGEEIHTFY--GHDGPVRSVNFSPNGKTLVS-GSDDKTIKLWNV-KTGKEIR 1026
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
GH V + F D TLV+ D +KLWN N+
Sbjct: 1027 TLHGHDSRVRSVNFSPDGKTLVSGSVDKTIKLWNGNN 1063
Score = 46.6 bits (109), Expect = 0.018, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH +V + F D TLV+ D +KLWNV + IRT KGH + V S G
Sbjct: 569 GHNGSVNSVSFSSDGKTLVSGSDDNTIKLWNVETGQEIRTLKGHDSGVYSVNFS--PDGK 626
Query: 290 LLGCGSETNQVFVYDVRWGE----------PVWVHDFEP 318
L GS+ + ++DV G+ PV+ +F P
Sbjct: 627 TLVSGSDDKTIILWDVETGQKLHTLKGHNGPVYSVNFSP 665
>gi|332711178|ref|ZP_08431111.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332349992|gb|EGJ29599.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 1197
Score = 71.2 bits (173), Expect = 7e-10, Method: Composition-based stats.
Identities = 64/247 (25%), Positives = 114/247 (46%), Gaps = 33/247 (13%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P + A+ + +++++ + H + + H K + C
Sbjct: 960 VHAVSFSPEGEILASASRDQTVKLWDWHTGECLHTLEGHIHHVKTISFSPC--------- 1010
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G++L SG +D + +D+ + G V SV +S G +L AS S D
Sbjct: 1011 ------GKILASGSHDNTIKLWDVSTGT-CLQTLPGQGDWVLSVVFSPGGNLL-ASASGD 1062
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++WD + G+C+ T+ SR V + F P G SL A+G D+ +D+
Sbjct: 1063 QTIKLWD--VETGQCLQTLSGHTSR--VRTIAFSPDGKSL-ASGSDDQTVQLWDIS--TG 1115
Query: 225 PVL-VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRT------YKGHVNN 276
VL +F GH K + I F + LV++ D +KLW+V + ++T Y+G +N
Sbjct: 1116 TVLKLFQGHHKAIRSIAFSPNRPVLVSSSEDETIKLWDVETGKCVKTLRIDRPYEG-MNI 1174
Query: 277 RNFVGLS 283
+N +GL+
Sbjct: 1175 KNAIGLT 1181
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G +L S D V +D + + H V ++ +S +L ASGS D T+++W
Sbjct: 969 GEILASASRDQTVKLWDWHTGECLHTLEGHI-HHVKTISFSPCGKIL-ASGSHDNTIKLW 1026
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G C+ T+ V V F P G +L+A+ D+ +DV + +
Sbjct: 1027 D--VSTGTCLQTL--PGQGDWVLSVVFSP-GGNLLASASGDQTIKLWDV-ETGQCLQTLS 1080
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V I F D +L + D ++LW+++ V++ ++GH + S R
Sbjct: 1081 GHTSRVRTIAFSPDGKSLASGSDDQTVQLWDISTGTVLKLFQGHHKAIRSIAFSPNR--P 1138
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
+L SE + ++DV G+ V
Sbjct: 1139 VLVSSSEDETIKLWDVETGKCV 1160
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L S D V+ +D + + H V SV ++ D + AS SDD T+++W
Sbjct: 884 GQMLASSSEDQRVILWDSDTGQCLQTLSGHTNL-VSSVTFAPKDDQILASSSDDTTIKLW 942
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G+C+ T+ S V V F P G ++A+ D+ +D + + +
Sbjct: 943 D--ANTGECLQTLW--GHDSWVHAVSFSPEG-EILASASRDQTVKLWDWHTG-ECLHTLE 996
Query: 231 GHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V I F ++ +G+ D +KLW+V+ ++T G ++V V+ GG
Sbjct: 997 GHIHHVKTISFSPCGKILASGSHDNTIKLWDVSTGTCLQTLPGQ---GDWVLSVVFSPGG 1053
Query: 290 -LLGCGSETNQVFVYDVRWGE 309
LL S + ++DV G+
Sbjct: 1054 NLLASASGDQTIKLWDVETGQ 1074
Score = 47.0 bits (110), Expect = 0.014, Method: Composition-based stats.
Identities = 63/296 (21%), Positives = 120/296 (40%), Gaps = 42/296 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK-L 100
S+ + F P+ TGG + +R++++ ++ C + P +
Sbjct: 695 SNPVFFTTFTPNAQTLVTGGEDQTVRVWDV--------------NTGSCLQVLEIPINWV 740
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S+ P G L +G V +DL I ++ VWSV +S L +
Sbjct: 741 LSIALSP--DGETLATGSDGTTVKFWDLASGECIKTLPDYNSH-VWSVAFSPDGKTL-VT 796
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASR-------SAVCCVEFHPFGSSLVAAGCADKK 213
GS+D T+++WD GKC+ T+ ++ S + V +P G +L++ ++
Sbjct: 797 GSEDTTVKIWD--VATGKCLQTLHEYSNSPLGNSYASRIWLVAVNPDGQTLLSVS-ENQT 853
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+D+ V+ G+ + + F D L ++ D + LW+ + + ++T G
Sbjct: 854 MKLWDIHTGQCLRTVY-GYSNWILSVAFSPDGQMLASSSEDQRVILWDSDTGQCLQTLSG 912
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR--------WGEPVWVH--DFEP 318
H N + V + + +L S+ + ++D WG WVH F P
Sbjct: 913 HTNLVSSVTFAP-KDDQILASSSDDTTIKLWDANTGECLQTLWGHDSWVHAVSFSP 967
Score = 45.1 bits (105), Expect = 0.049, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 114/278 (41%), Gaps = 47/278 (16%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+G + ++++N+ + + + HS + TP
Sbjct: 659 LAFSPEGEILASGSHDQTVKLWNVHT---GKCLQTLSGHSNPVFFTTFTP---------- 705
Query: 108 GTSGRVLGSGDYDGVVMEYDLEK-------KVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
+ + L +G D V +D+ ++PI V S+ S L A+
Sbjct: 706 --NAQTLVTGGEDQTVRVWDVNTGSCLQVLEIPI--------NWVLSIALSPDGETL-AT 754
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSD T++ WD G+C+ T+ P + S V V F P G +LV G D +DV
Sbjct: 755 GSDGTTVKFWD--LASGECIKTL-PDYN-SHVWSVAFSPDGKTLVT-GSEDTTVKIWDVA 809
Query: 221 --KMVDPVLVFDGHRKTVTYIRFL-------DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
K + + + +Y + D TL++ + +KLW+++ + +RT
Sbjct: 810 TGKCLQTLHEYSNSPLGNSYASRIWLVAVNPDGQTLLSVSENQTMKLWDIHTGQCLRTVY 869
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
G+ N V S G +L SE +V ++D G+
Sbjct: 870 GYSNWILSVAFS--PDGQMLASSSEDQRVILWDSDTGQ 905
Score = 39.7 bits (91), Expect = 2.5, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 38/197 (19%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKC--VSTVQPSASRSA-------VCCV 195
+W +D L SG D + +W G V+ S+SA V
Sbjct: 524 LWQLD-------LDLSGYDFSNLTVWQAYLQGMNLHRVNFANADLSKSALTRTLGGVLSA 576
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV----DTLVTAG 251
F P G L A D + + +DV + ++ +GH +++ L V + L +
Sbjct: 577 TFSPDGKLL--ATSVDNEIWLWDVAN-IKQIITCNGH---TAWVQSLAVSPEGEILASGS 630
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE-- 309
D ++LWNV+ + ++T +GH + + S G +L GS V +++V G+
Sbjct: 631 NDQTIRLWNVHTGQCLKTLRGHTSWVQSLAFS--PEGEILASGSHDQTVKLWNVHTGKCL 688
Query: 310 --------PVWVHDFEP 318
PV+ F P
Sbjct: 689 QTLSGHSNPVFFTTFTP 705
>gi|271964476|ref|YP_003338672.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270507651|gb|ACZ85929.1| WD40 repeatdomain-containing protein-like protein [Streptosporangium
roseum DSM 43021]
Length = 1901
Score = 71.2 bits (173), Expect = 7e-10, Method: Composition-based stats.
Identities = 65/202 (32%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L G DG V+ D +P+ H GR V++V +S+ +L A+G+ DGT+++W
Sbjct: 1219 GETLVIGGDDGGVLLCDSATGLPVRNLQGHRGR-VYAVTFSRSGDLL-ATGASDGTVRLW 1276
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
DP V + R V V F P G L+AAG AD +D + P
Sbjct: 1277 DPVTASASHVL----AGHRDGVWPVVFSPAGR-LIAAGGADGTVRIWDTATGL-PYRELP 1330
Query: 231 GHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + Y D DTLVT G +++W+V ++RT GH R V + G
Sbjct: 1331 GHLAPI-YTATFDAGGDTLVTGDAGGTVRMWDVRTGEIVRTLDGH---RGSVYRIAYDPG 1386
Query: 289 G-LLGCGSETNQVFVYDVRWGE 309
G LL G V ++D R G+
Sbjct: 1387 GTLLAAGDREGVVRIWDPRDGQ 1408
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 85/345 (24%), Positives = 135/345 (39%), Gaps = 61/345 (17%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD +S+S A D + + F P+ + A GG +RI++ + L P
Sbjct: 1276 WD----PVTASASHVLAGHRDGVWPVVFSPAGRLIAAGGADGTVRIWDTATGL---PYRE 1328
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H A + + + G G L +GD G V +D+ + D H G
Sbjct: 1329 LPGHL----------APIYTATFDAG--GDTLVTGDAGGTVRMWDVRTGEIVRTLDGHRG 1376
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V+ + Y G +L A+G +G +++WDPR G+ + + + +V + F P G
Sbjct: 1377 -SVYRIAYDPGGTLL-AAGDREGVVRIWDPR--DGQVLHAL--TGHTGSVYALSFAPSG- 1429
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVL-----VFDGHRKTVTYIRFL-DVDTLVTAGTDGCL 256
L+A G D ++ DPV + GHR V + F D L +A +DG +
Sbjct: 1430 RLLATGDTDGAI------RLWDPVSGASRGMRTGHRAAVYQVGFSPDGSLLASADSDGAV 1483
Query: 257 KLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH-----GGLLGCGSETNQVFVYDVRWGEPV 311
L V + R GH SVW GG L S V ++D G+
Sbjct: 1484 HLHGVAEERERVELAGHRG-------SVWPFAFRPGGGQLATSSNDGTVRLWDTATGQCR 1536
Query: 312 WVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
V RG + R D L G+DG++ ++
Sbjct: 1537 RVL-----------RGHGRKITSVRFSADGSMLATSGNDGVVRIW 1570
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 28/235 (11%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ I +DP ++ A G +RI++ + V H A+ H+ + +L
Sbjct: 1377 SVYRIAYDPGGTLLAAGDREGVVRIWDPRDGQVLH---ALTGHT----------GSVYAL 1423
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR--VWSVDYSKGDPVLGASG 161
+ P SGR+L +GD DG + +D V R G R V+ V +S D L AS
Sbjct: 1424 SFAP--SGRLLATGDTDGAIRLWD---PVSGASRGMRTGHRAAVYQVGFSP-DGSLLASA 1477
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
DG + + + + V+ + R +V F P G L A D +D
Sbjct: 1478 DSDGAVHLHGVAEERER----VELAGHRGSVWPFAFRPGGGQL-ATSSNDGTVRLWDT-A 1531
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
V GH + +T +RF D L T+G DG +++W R +R G +
Sbjct: 1532 TGQCRRVLRGHGRKITSVRFSADGSMLATSGNDGVVRIWEPRTGRRLRELTGQAD 1586
Score = 46.2 bits (108), Expect = 0.025, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
+ D D V + Y + + D HG RV S+ +S D A+G DD ++W+ +
Sbjct: 1645 ANDDDSVRVWYRASGRQVVKLADHHG--RVRSIAFSP-DGRHVATGCDDRLARVWE--VE 1699
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR-----------KMVD 224
G CV+ ++ R V V F P GS+L +AG D A +D+R +++
Sbjct: 1700 TGTCVAILEGHTDR--VYSVVFSPDGSTLASAG-NDGDARVWDLRPDPRPGHPWRPRLLH 1756
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ G TV + D L T G D ++LW+ R + GH R L+
Sbjct: 1757 TLTRHPGRLWTVAFSP--DGSLLATGGDDPAVRLWDARTGRHLHALTGH--TRRIWSLAF 1812
Query: 285 WRHGGLLGCGSETNQVFVYDVRWG 308
G LL + ++++ G
Sbjct: 1813 APAGDLLASAGDDGVAILWELHPG 1836
>gi|414584775|tpg|DAA35346.1| TPA: hypothetical protein ZEAMMB73_159052 [Zea mays]
Length = 877
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 114/250 (45%), Gaps = 20/250 (8%)
Query: 86 HSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRV 145
H+K + ++ + ++ LK TS RVL +G D V + + K I H V
Sbjct: 19 HNKTGEEFVAHSSNVNCLKIGRKTS-RVLVTGGEDHKVNLWAIGKPNSILSLSGHTSA-V 76
Query: 146 WSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
SV + + V A+G+ GT+++WD + K V T+ + RS V+FHPFG
Sbjct: 77 ESVGFDSTE-VFVAAGAASGTIKLWD--LEEAKIVRTL--TGHRSNCMSVDFHPFGE-FF 130
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDS 264
A+G D +D+R+ + + + GH + V IRF D +V+ G D +KLW++
Sbjct: 131 ASGSLDTNLKIWDIRRK-NCIHTYKGHTRGVNTIRFTPDGRWVVSGGEDNIVKLWDLTAG 189
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGS 324
+++ +K H + H LL GS V +D + FE + + G
Sbjct: 190 KLLHEFKCHEGQIQCIDFHP--HEFLLATGSADKTVKFWD--------LETFELIGSTGP 239
Query: 325 ERGFVSSVCW 334
E V S+ +
Sbjct: 240 ETTGVRSMTF 249
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V C++ S ++ G D K + + K + +L GH V + F +
Sbjct: 28 AHSSNVNCLKIGRKTSRVLVTGGEDHKVNLWAIGK-PNSILSLSGHTSAVESVGFDSTEV 86
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH--GGLLGCGSETNQVFVY 303
V AG G +KLW++ +++++RT GH +N +SV H G GS + ++
Sbjct: 87 FVAAGAASGTIKLWDLEEAKIVRTLTGHRSN----CMSVDFHPFGEFFASGSLDTNLKIW 142
Query: 304 DVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHV 355
D+R +H + +G V R D +V+GG D ++ +
Sbjct: 143 DIRRKN--CIHTY---------KGHTRGVNTIRFTPDGRWVVSGGEDNIVKL 183
>gi|434404035|ref|YP_007146920.1| WD40 repeat-containing protein [Cylindrospermum stagnale PCC 7417]
gi|428258290|gb|AFZ24240.1| WD40 repeat-containing protein [Cylindrospermum stagnale PCC 7417]
Length = 1215
Score = 71.2 bits (173), Expect = 8e-10, Method: Composition-based stats.
Identities = 69/232 (29%), Positives = 101/232 (43%), Gaps = 27/232 (11%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ S+ + P G++ SG DG V ++ I H GR VWSV + +L A
Sbjct: 588 IRSVTFSP--DGQIFASGSEDGTVKLWNAGSAKLISTLTGHTGR-VWSVSFHPHSKIL-A 643
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+DGT+++WD + T+ +A RS V V F P G L A C+ +
Sbjct: 644 SGSEDGTVKLWD--VTHSTLIKTI--NAHRSWVRTVSFSPDGQIL--ASCSSDGTI--KL 695
Query: 220 RKMVDPVLV--FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
K D L+ GH VT+I D TL +A D ++LWN+ + ++ T K H +
Sbjct: 696 WKTADATLLKTLKGHTHIVTHISLSPDNQTLASASFDTTVRLWNIGNGSLVNTLKDHKTH 755
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG----------EPVWVHDFEP 318
V S G +L E V +++V G VW F P
Sbjct: 756 TRSVSFS--PDGKILASSDEEGIVKLWNVADGTLLQNLPTHRRAVWSAIFSP 805
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 30/270 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S ++ + F+P + A+G KI+++NI++ + + + H A +
Sbjct: 882 STNVQAVSFNPDGKMLASGSDDSKIKLWNIRNGTL---LQTLNGHQ----------APVV 928
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
S+ + P G+ L SG D V ++++ + G R W V +S L A
Sbjct: 929 SVSFSP--DGKTLASGSNDKTVKLWNVQDGRLL---KTFNGHRAWVRKVRFSPNGKTL-A 982
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++W+ DG + QP RS V + F P G +L A C+D ++
Sbjct: 983 SGSSDSTVKLWNV-ADGRLLKTFKQP---RSIVADLNFSPDGKTL-AVACSDGDIKILNL 1037
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
K F H V I F + L + G+D +KLWN + R++ T +GH++N
Sbjct: 1038 -KTATLTQSFPAHSSWVNTISFSPNGKILASGGSDSKVKLWNAENGRLLFTLEGHLSNVT 1096
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ S +L S+ + V V++V G
Sbjct: 1097 NISFS--PDSKILASSSDDSTVRVWNVENG 1124
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 136 ERDEHGGRR--VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
ERD G R + SV +S D + ASGS+DGT+++W+ K +ST+ R V
Sbjct: 577 ERDRALGHRSGIRSVTFSP-DGQIFASGSEDGTVKLWN--AGSAKLISTLTGHTGR--VW 631
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGT 252
V FHP S ++A+G D +DV + + HR V + F D L + +
Sbjct: 632 SVSFHPH-SKILASGSEDGTVKLWDVTHST-LIKTINAHRSWVRTVSFSPDGQILASCSS 689
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
DG +KLW D+ +++T KGH + + LS
Sbjct: 690 DGTIKLWKTADATLLKTLKGHTHIVTHISLS 720
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
R+WS+ +S L SGS D +++W+ + + + + V V F+P G
Sbjct: 843 RIWSIGFSPDGKTL-VSGSMDSAIKLWNLEVKEPQTIK-----GNSTNVQAVSFNPDGK- 895
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
++A+G D K +++R + +GH+ V + F D TL + D +KLWNV
Sbjct: 896 MLASGSDDSKIKLWNIRNGT-LLQTLNGHQAPVVSVSFSPDGKTLASGSNDKTVKLWNVQ 954
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
D R+++T+ GH V S +G L GS + V +++V
Sbjct: 955 DGRLLKTFNGHRAWVRKVRFS--PNGKTLASGSSDSTVKLWNV 995
Score = 44.3 bits (103), Expect = 0.099, Method: Composition-based stats.
Identities = 61/306 (19%), Positives = 119/306 (38%), Gaps = 63/306 (20%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P+ A+G ++++N+ ++ + + ++ L + P
Sbjct: 972 VRFSPNGKTLASGSSDSTVKLWNVAD-------------GRLLKTFKQPRSIVADLNFSP 1018
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L DG + +L+ H V ++ +S +L ASG D +
Sbjct: 1019 --DGKTLAVACSDGDIKILNLKTATLTQSFPAHSSW-VNTISFSPNGKIL-ASGGSDSKV 1074
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ + G+ + T++ S V + F P S ++A+ D ++V ++ +
Sbjct: 1075 KLWN--AENGRLLFTLE--GHLSNVTNISFSP-DSKILASSSDDSTVRVWNVENGLE-IS 1128
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+ +GH +VT + F D TL +AG D +K+W K + NF+
Sbjct: 1129 ILEGHLGSVTSVMFSPDGKTLASAGLDNTIKMW-----------KLELGLDNFIS----- 1172
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVA 346
GC +W+ D+ T+ E G S +C RR G ++ A
Sbjct: 1173 ----QGC-----------------LWLEDY--FTSHPEEAGKFSKICPRRFGSNDAETSA 1209
Query: 347 GGSDGL 352
G+
Sbjct: 1210 NVKTGV 1215
Score = 38.9 bits (89), Expect = 4.5, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVV 84
NL+T + S P A S + I F P+ + A+GG K++++N ++ + +
Sbjct: 1035 LNLKTATLTQSFP--AHSSWVNTISFSPNGKILASGGSDSKVKLWNAEN---GRLLFTLE 1089
Query: 85 DHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR 144
H + ++++ + P + ++L S D V +++E + I + H G
Sbjct: 1090 GHL----------SNVTNISFSPDS--KILASSSDDSTVRVWNVENGLEISILEGHLG-S 1136
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMW 170
V SV +S L ++G D+ T++MW
Sbjct: 1137 VTSVMFSPDGKTLASAGLDN-TIKMW 1161
>gi|376005704|ref|ZP_09783130.1| WD-40 repeat protein [Arthrospira sp. PCC 8005]
gi|375325917|emb|CCE18883.1| WD-40 repeat protein [Arthrospira sp. PCC 8005]
Length = 709
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 136/316 (43%), Gaps = 37/316 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++S+ + F P A+G + +R++++ + + + H+ +
Sbjct: 342 TNSVLSVSFSPDGQTLASGSWDKTVRLWDVPT---GRELRQLTGHTN----------SVL 388
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L SG YD V +D+ + + H V SV +S L ASG
Sbjct: 389 SVSFSP--DGQTLASGSYDKTVRLWDVPTGRELRQLSGHT-NSVLSVSFSPDGQTL-ASG 444
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD G+ + Q + ++V V F P G +L A+G +D +DV
Sbjct: 445 SYDKTVRLWD--VPTGRELR--QLTGHTNSVNSVSFSPDGQTL-ASGSSDNTVRLWDVAT 499
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + GH V + F D TL + +D ++LW+V R +R GH + N V
Sbjct: 500 GRE-LRQLTGHTDYVNSVSFSPDGQTLASGSSDNTVRLWDVATGRELRQLTGHTDYVNSV 558
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S G L GS N V ++DV G + +T G +S+ D
Sbjct: 559 SFS--PDGQTLASGSSDNTVRLWDVATG-----RELRQLT------GHTNSLLSVSFSPD 605
Query: 341 ECTLVAGGSDGLLHVF 356
TL +G SD + ++
Sbjct: 606 GQTLASGSSDNTVRLW 621
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 26/265 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++S+ + F P A+G + +R++++ + + + H+ + +P
Sbjct: 426 TNSVLSVSFSPDGQTLASGSYDKTVRLWDVPT---GRELRQLTGHTNSVNSVSFSP---- 478
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G+ L SG D V +D+ + + H V SV +S L ASG
Sbjct: 479 --------DGQTLASGSSDNTVRLWDVATGRELRQLTGHTDY-VNSVSFSPDGQTL-ASG 528
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD G+ + Q + V V F P G +L A+G +D +DV
Sbjct: 529 SSDNTVRLWD--VATGRELR--QLTGHTDYVNSVSFSPDGQTL-ASGSSDNTVRLWDVAT 583
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + GH ++ + F D TL + +D ++LW+V R +R GH N + +
Sbjct: 584 GRE-LRQLTGHTNSLLSVSFSPDGQTLASGSSDNTVRLWDVATGRELRQLTGHTN--SLL 640
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV 305
+S G L GS V ++DV
Sbjct: 641 SVSFSPDGQTLASGSYDKTVRLWDV 665
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P A+G +R++++ + + + H+ DY ++
Sbjct: 510 TDYVNSVSFSPDGQTLASGSSDNTVRLWDVAT---GRELRQLTGHT---DY-------VN 556
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L SG D V +D+ + + H + SV +S L ASG
Sbjct: 557 SVSFSP--DGQTLASGSSDNTVRLWDVATGRELRQLTGHT-NSLLSVSFSPDGQTL-ASG 612
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD G+ + Q + +++ V F P G +L A+G DK +DV
Sbjct: 613 SSDNTVRLWD--VATGRELR--QLTGHTNSLLSVSFSPDGQTL-ASGSYDKTVRLWDVPN 667
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+ + GH V + F D TL + DG ++LW V
Sbjct: 668 GRE-LRQLKGHTLLVNSVSFSPDGQTLASGSWDGVVRLWRV 707
>gi|119512021|ref|ZP_01631116.1| hypothetical protein N9414_03358 [Nodularia spumigena CCY9414]
gi|119463311|gb|EAW44253.1| hypothetical protein N9414_03358 [Nodularia spumigena CCY9414]
Length = 517
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 121/266 (45%), Gaps = 25/266 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + + P A+G I+++N+++ + + HS DY++ +
Sbjct: 234 SDLVESVAISPDGRTLASGSWDNTIKLWNLQT---QQQIATLTGHS---DYFV------N 281
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P GR L SG +D + ++L+ + + H V SV +S L ASG
Sbjct: 282 SVAFSP--DGRTLASGSWDKTIKLWNLQTQQEVATLTGHS-EGVNSVAFSPDGRTL-ASG 337
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ + + V+T+ + V V F G +L A+G DK ++++
Sbjct: 338 SWDKTIKLWNLQTQ--QEVATL--TGHSEGVNSVAFSLDGRTL-ASGSWDKTIKLWNLQT 392
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ F GH + V + F D TL + D +KLWN+ + I T+ GH N V
Sbjct: 393 Q-QQIATFTGHSEGVNSVAFSPDSRTLASGSWDKTIKLWNLQTQQQIVTFTGHSGGVNSV 451
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVR 306
S G L GS + +++++
Sbjct: 452 AFS--PDGRTLASGSWDKTIKLWNLQ 475
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 24/220 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + + F P A+G + I+++N+++ V + HS+ + +
Sbjct: 319 SEGVNSVAFSPDGRTLASGSWDKTIKLWNLQT---QQEVATLTGHSEGVNSVAFS----- 370
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
GR L SG +D + ++L+ + I H V SV +S L ASG
Sbjct: 371 -------LDGRTLASGSWDKTIKLWNLQTQQQIATFTGHS-EGVNSVAFSPDSRTL-ASG 421
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ + V + V V F P G +L A+G DK ++++
Sbjct: 422 SWDKTIKLWNLQTQ----QQIVTFTGHSGGVNSVAFSPDGRTL-ASGSWDKTIKLWNLQT 476
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN 260
+ V GH + V + F D TL + TD +KLW
Sbjct: 477 QQE-VATLTGHSEAVNSVAFSPDGRTLASGSTDKTIKLWQ 515
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 17/132 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + + F P A+G + I+++N+++ +V HS + +P
Sbjct: 403 SEGVNSVAFSPDSRTLASGSWDKTIKLWNLQT---QQQIVTFTGHSGGVNSVAFSP---- 455
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
GR L SG +D + ++L+ + + H V SV +S L ASG
Sbjct: 456 --------DGRTLASGSWDKTIKLWNLQTQQEVATLTGHS-EAVNSVAFSPDGRTL-ASG 505
Query: 162 SDDGTMQMWDPR 173
S D T+++W R
Sbjct: 506 STDKTIKLWQDR 517
>gi|393232289|gb|EJD39872.1| HET-E [Auricularia delicata TFB-10046 SS5]
Length = 304
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 134/316 (42%), Gaps = 37/316 (11%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYN--IKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++ + + PS + +G + IR+++ +V+V+ P+ H + +P
Sbjct: 19 TVSSVAYLPSRNRIVSGSWDKSIRVWDAITGAVVVEPPL----GHDHAINCVAVSP---- 70
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
GR L S D + +D E PI + G V+SV YS D SG
Sbjct: 71 --------DGRRLCSASDDRTIRRWDAESGAPIGKPMTGHGGSVFSVAYSP-DSRRSVSG 121
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
++D T+++WD G+ + + S V CV F P G+ +A+G D +D
Sbjct: 122 ANDRTVRLWDAST--GEALGAPLEGHTNS-VWCVAFSPDGA-CIASGSWDDTIRLWDSAT 177
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ GH TV +RF D LVT D +++WNV ++ RT +GH + V
Sbjct: 178 GAH-LATLKGHTDTVFSLRFSPDRIHLVTGSGDNTVRIWNVETRKLERTLEGHSDYIRSV 236
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
LS G + GS + ++D + GE + P+T G V D
Sbjct: 237 ALSP--SGRYIASGSFDKTIRIWDTQTGEAL----GAPLT------GHTDRVYSVAFSPD 284
Query: 341 ECTLVAGGSDGLLHVF 356
++V+G DG L V+
Sbjct: 285 GRSIVSGSEDGTLRVW 300
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 19 ARCEWDFNLRTTVSSSSSPNAAV---SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL 75
A WD +R S++ + A + +D++ + F P TG +RI+N+++
Sbjct: 162 ASGSWDDTIRLWDSATGAHLATLKGHTDTVFSLRFSPDRIHLVTGSGDNTVRIWNVETRK 221
Query: 76 VDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF 135
++ + HS +P SGR + SG +D + +D + +
Sbjct: 222 LERTLEG---HSDYIRSVALSP------------SGRYIASGSFDKTIRIWDTQTGEALG 266
Query: 136 ERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
RV+SV +S + SGS+DGT+++WD
Sbjct: 267 APLTGHTDRVYSVAFSPDGRSI-VSGSEDGTLRVWD 301
>gi|345328955|ref|XP_001508340.2| PREDICTED: katanin p80 WD40-containing subunit B1 [Ornithorhynchus
anatinus]
Length = 636
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH + V +
Sbjct: 144 RGHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVSVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V S+ + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSILF---NPDGCCLYSGS 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|158339089|ref|YP_001520266.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158309330|gb|ABW30947.1| WD-repeat protein [Acaryochloris marina MBIC11017]
Length = 1191
Score = 70.9 bits (172), Expect = 9e-10, Method: Composition-based stats.
Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 15/199 (7%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L SG D V +DL+ I+ H VWSV ++ L ASGS D TM++W +
Sbjct: 921 LASGHEDSSVKLWDLQTHQCIYAITRHLNT-VWSVAFNPSGDYL-ASGSADQTMKLW--Q 976
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
+ G+ + T S + VC V FHP + ++A+G D+ +++ V GH
Sbjct: 977 TETGQLLQTF--SGHENWVCSVAFHP-QAEVLASGSYDRTIKLWNMTSG-QCVQTLKGHT 1032
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH--GGL 290
+ I F D + L + GTD +KLW+V + ++T +GH N+V +SV H G L
Sbjct: 1033 SGLWAIAFSPDGELLASCGTDQTIKLWDVQTGQCLKTLRGH---ENWV-MSVAFHPLGRL 1088
Query: 291 LGCGSETNQVFVYDVRWGE 309
L S + + V+DV+ E
Sbjct: 1089 LASASADHTLKVWDVQSSE 1107
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+++ + F+PS A+G + ++++ ++ + H ++C S
Sbjct: 949 NTVWSVAFNPSGDYLASGSADQTMKLWQTET---GQLLQTFSGHEN----WVC------S 995
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P VL SG YD + +++ + H +W++ +S +L + G+
Sbjct: 996 VAFHP--QAEVLASGSYDRTIKLWNMTSGQCVQTLKGHTSG-LWAIAFSPDGELLASCGT 1052
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+++WD + G+C+ T++ + V V FHP G L+A+ AD +DV+
Sbjct: 1053 DQ-TIKLWDVQT--GQCLKTLR--GHENWVMSVAFHPLGR-LLASASADHTLKVWDVQSS 1106
Query: 223 VDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+ + GH+ V + F D L + G D LKLW+VN ++T +
Sbjct: 1107 -ECLQTLSGHQNEVWSVAFSFDGQILASGGDDQTLKLWDVNTYDCLKTLR 1155
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 122/272 (44%), Gaps = 40/272 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVC-DYYICTPAKLSSLKWK 106
+ F P + + A+ I+I+N H+ C + I + + S+ +
Sbjct: 614 LAFHPKEKLLASASADHSIKIWNT--------------HTGQCLNTLIGHRSWVMSVAYS 659
Query: 107 PGTSGR----VLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYS-KGDPVLGA 159
P SG+ L S D + +D++ + + +HG VWS+ +G V A
Sbjct: 660 P--SGKELQPFLASCSADRKIKLWDVQTGQCLQTLAEHQHG---VWSIAIDPQGKYV--A 712
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD + G+C+ T Q V V F P G L+A G AD+ ++V
Sbjct: 713 SASADQTVKLWDVQT--GQCLRTYQ--GHSQGVWSVTFSPDGK-LLATGSADQTIKLWNV 767
Query: 220 RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + F GH+ V + F D LV+ D ++LW + + +R GH +N
Sbjct: 768 QTG-QCLNTFKGHQNWVWSVCFNPQGDILVSGSADQSIRLWKIQTGQCLRILSGH---QN 823
Query: 279 FV-GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+V ++V G L+ GSE + ++D+ G+
Sbjct: 824 WVWSVAVSPEGNLMASGSEDRTLRLWDIHQGQ 855
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 110 SGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
SG L SG D + + E + + F E+ V SV + VL ASGS D T+
Sbjct: 959 SGDYLASGSADQTMKLWQTETGQLLQTFSGHENW---VCSVAFHPQAEVL-ASGSYDRTI 1014
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ G+CV T++ S + + F P G L + G D+ +DV+ +
Sbjct: 1015 KLWN--MTSGQCVQTLK--GHTSGLWAIAFSPDGELLASCG-TDQTIKLWDVQTG-QCLK 1068
Query: 228 VFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH V + F + L+ +A D LK+W+V S ++T GH N V S
Sbjct: 1069 TLRGHENWVMSVAFHPLGRLLASASADHTLKVWDVQSSECLQTLSGHQNEVWSVAFSF-- 1126
Query: 287 HGGLLGCGSETNQVFVYDV 305
G +L G + + ++DV
Sbjct: 1127 DGQILASGGDDQTLKLWDV 1145
>gi|119491229|ref|ZP_01623326.1| hypothetical protein L8106_25475 [Lyngbya sp. PCC 8106]
gi|119453570|gb|EAW34731.1| hypothetical protein L8106_25475 [Lyngbya sp. PCC 8106]
Length = 628
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 121/266 (45%), Gaps = 25/266 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + + F P + A+G I+++++K+ H ++A + C +
Sbjct: 345 SNHVRSVAFSPDGRILASGSNDSTIKLWDMKT----HQIIATLKGHSHC---------VR 391
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P GR+L SG D + +D+E + I H V K + + ASG
Sbjct: 392 SVAFSP--DGRILASGSVDNTIKLWDVETRATIATLKGHSNSVVCVALNQKAN--ILASG 447
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD + ++T++ + V F P SS++A+ DK +DV
Sbjct: 448 SADKTIKLWD--VSTHREIATLE--GHSGCINSVAFSP-DSSILASCSYDKSIKLWDVAT 502
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + +GH + + F D TL + D +KLWNV T +G N+ +
Sbjct: 503 HRE-IATLEGHSSYILSVVFSPDSRTLASGSFDQTIKLWNVKTQGEFATLRGR-NSSSIW 560
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVR 306
+++ + G L GS+ + + +++V+
Sbjct: 561 SIALSKDGSTLASGSKDSTIKLWNVK 586
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 7/132 (5%)
Query: 175 DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRK 234
C+ T+ + + V V F P G ++A+G D +D+ K + GH
Sbjct: 333 QNATCIKTL--TGHSNHVRSVAFSPDGR-ILASGSNDSTIKLWDM-KTHQIIATLKGHSH 388
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGC 293
V + F D L + D +KLW+V I T KGH N+ V L+ + +L
Sbjct: 389 CVRSVAFSPDGRILASGSVDNTIKLWDVETRATIATLKGHSNSVVCVALN--QKANILAS 446
Query: 294 GSETNQVFVYDV 305
GS + ++DV
Sbjct: 447 GSADKTIKLWDV 458
>gi|301752954|ref|XP_002912316.1| PREDICTED: LOW QUALITY PROTEIN: katanin p80 WD40-containing subunit
B1-like [Ailuropoda melanoleuca]
Length = 664
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL G + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGGSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|297742704|emb|CBI35338.3| unnamed protein product [Vitis vinifera]
Length = 989
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 24/245 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEH-GGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G S D S+ +L A+G+ GT++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE---LLVAAGAASGTIK 84
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V+FHPFG A+G D +D+RK +
Sbjct: 85 LWD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 138
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V IRF D +V+ G D +KLW++ +++ +K H + H
Sbjct: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQLQCIDFH--PH 196
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS V +D+ FE + +AG E V + + G+ TL+ G
Sbjct: 197 EFLLATGSADRTVKFWDLE--------TFELIGSAGPETAGVRCMTFNPDGK---TLLCG 245
Query: 348 GSDGL 352
+ L
Sbjct: 246 LHESL 250
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S+V C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEL 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 R 306
R
Sbjct: 131 R 131
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSLKWK 106
++F P FA+G + ++I++I+ K C + Y ++++++
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIR--------------KKGCIHTYKGHTRGVNAIRFT 152
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + SG D V +DL + + H G ++ +D+ + +L A+GS D T
Sbjct: 153 P--DGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEG-QLQCIDFHPHEFLL-ATGSADRT 208
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
++ WD + + + + P + V C+ F+P G +L+ K ++++ + D V
Sbjct: 209 VKFWD--LETFELIGSAGPET--AGVRCMTFNPDGKTLLCGLHESLKVFSWEPIRCHDAV 264
Query: 227 LVFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V + R D++ L + C+ +W V+ SR+ G+V N
Sbjct: 265 --------DVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDLSRIEPYAVGNVTRLN 313
>gi|347441927|emb|CCD34848.1| similar to prolyl oligopeptidase [Botryotinia fuckeliana]
Length = 446
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 42/299 (14%)
Query: 18 RARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD 77
R R W L+T S+S+ + F P V A+G + IR++++ +
Sbjct: 72 RTRSNWSATLQTL--------EGHSESVKSVAFSPDGKVVASGSYDKTIRLWDVAT---G 120
Query: 78 HPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIF 135
+ + HS +++ + A S G+V+ SG D + +D+ + V F
Sbjct: 121 ESLQKLEGHS----HWVNSVAFSSD--------GKVVASGSNDNTIRLWDVATGESVQTF 168
Query: 136 ERDEHGGRRVW--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
E G W SV +S V+ ASGS D T+++WD G+ + T + +V
Sbjct: 169 E-----GHSKWVNSVAFSPDGKVV-ASGSYDETIRLWDVAT--GESLQTFE--GHSESVK 218
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT- 252
V F P G +VA+G D+ +DV + + F+GH ++V + F +V +G+
Sbjct: 219 SVAFSPDGK-VVASGSYDETIRLWDVATG-ESLQTFEGHSESVKSVAFSPDGKVVASGSY 276
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
D ++LW+V ++T++GH ++ V S G ++ GS + ++DV GE +
Sbjct: 277 DETIRLWDVATGESLQTFEGHSDSVKSVAFS--PDGKVVASGSGDKTIRLWDVATGESL 333
>gi|307591415|ref|YP_003900214.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306986269|gb|ADN18148.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
Length = 1246
Score = 70.9 bits (172), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++++S V+ ++ D+ + +S
Sbjct: 918 TDWICSVAFSPDGKTLVSGSGDQTIRLWSVES----GEVIKILQEKD--DWVLLYQVAVS 971
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ +++ S +D + +DL+ EH +RVW++ +S +L SG
Sbjct: 972 P-------NAQLIASTSHDNTIKLWDLKTGEKYTFAPEHQ-KRVWALAFSPNSQML-VSG 1022
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR C+ T Q ++ V V F P G+ L+A G D+ + +
Sbjct: 1023 SGDNSVKLWSVPR---RFCLKTFQ--EHQAWVLSVAFSPDGT-LIATGSEDRTIKLWSIE 1076
Query: 221 K-MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + F GH+ + + F D L ++ D +KLW V D +I +++GH +
Sbjct: 1077 DDLTQSLQTFKGHQGRIWSVAFSPDGQLLASSSDDQTVKLWKVEDGTLINSFEGHKSWVW 1136
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV G+
Sbjct: 1137 SVDFS--PEGKLLASGGDDATILIWDVETGQ 1165
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 627 LLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNAEGQLL-ASGGQDGILKIW 685
Query: 171 DPRCDGG-KCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADK--KAYAYDVRKMVDPV 226
D C S PS A + V F P S +A G DK K ++ D + +
Sbjct: 686 SITTDPSLNCHSLPHPSQKHHAPIRSVTFSP-DSKFLATGSEDKTIKIWSVDTGECLH-- 742
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+GH++ V + F L+ +G+ D +K+W V + + T KGH + V S
Sbjct: 743 -TLEGHQERVGGVTFSPNGQLLASGSADKTIKIWLVETGKCLHTLKGHQDWVWQVAFS-- 799
Query: 286 RHGGLLGCGSETNQVFVYDV 305
G LL GS + ++ +
Sbjct: 800 SDGQLLASGSGDKTIKIWSI 819
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 111 GRVLGSGDYDGVV----MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
G ++ +G D + +E DL + + F+ H GR +WSV +S D L AS SDD T
Sbjct: 1058 GTLIATGSEDRTIKLWSIEDDLTQSLQTFK--GHQGR-IWSVAFSP-DGQLLASSSDDQT 1113
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++W + + G +++ + +S V V+F P G L+A+G D +DV
Sbjct: 1114 VKLW--KVEDGTLINSFE--GHKSWVWSVDFSPEGK-LLASGGDDATILIWDVETGQRRQ 1168
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
L + H K+V + F + TL +A D +KLWNV
Sbjct: 1169 LPCE-HTKSVRSVCFSPNGQTLASASEDETIKLWNV 1203
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 60/290 (20%), Positives = 122/290 (42%), Gaps = 38/290 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ +G + F P+ + A+G + I+I+ +++ H + D
Sbjct: 749 ERVGGVTFSPNGQLLASGSADKTIKIWLVETGKCLHTLKGHQD----------------- 791
Query: 103 LKWKPGTS--GRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W+ S G++L SG D + + +E+K + + +WS+ +S D A
Sbjct: 792 WVWQVAFSSDGQLLASGSGDKTIKIWSIIEEKYQNIDTLKGHENWIWSIAFSP-DGQYIA 850
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+D T+++W + +C+ + +R + + F P S + +G D+ + +
Sbjct: 851 SGSEDFTLRLWSVKTR--ECLQCFRGYGNR--LSSIAFSP-DSQYILSGSIDRSIRLWSI 905
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + +GH + + F D TLV+ D ++LW+V VI+ + +
Sbjct: 906 KNH-KCLRQINGHTDWICSVAFSPDGKTLVSGSGDQTIRLWSVESGEVIKILQEKDDWVL 964
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
++V + L+ S N + ++D++ GE VW F P
Sbjct: 965 LYQVAVSPNAQLIASTSHDNTIKLWDLKTGEKYTFAPEHQKRVWALAFSP 1014
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 63/292 (21%), Positives = 123/292 (42%), Gaps = 26/292 (8%)
Query: 23 WDFNLRTTVSSSSSPNAAVSD--SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV 80
W +++ S P+ + I + F P ATG + I+I+++ + H +
Sbjct: 685 WSITTDPSLNCHSLPHPSQKHHAPIRSVTFSPDSKFLATGSEDKTIKIWSVDTGECLHTL 744
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
H + ++ + + P +G++L SG D + + +E + H
Sbjct: 745 EG---HQE----------RVGGVTFSP--NGQLLASGSADKTIKIWLVETGKCLHTLKGH 789
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
VW V +S D L ASGS D T+++W + + + T++ + + + F P
Sbjct: 790 QD-WVWQVAFSS-DGQLLASGSGDKTIKIWSIIEEKYQNIDTLK--GHENWIWSIAFSPD 845
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
G +A+G D + V K + + F G+ ++ I F D +++ D ++LW
Sbjct: 846 G-QYIASGSEDFTLRLWSV-KTRECLQCFRGYGNRLSSIAFSPDSQYILSGSIDRSIRLW 903
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ + + +R GH + V S G L GS + ++ V GE +
Sbjct: 904 SIKNHKCLRQINGHTDWICSVAFS--PDGKTLVSGSGDQTIRLWSVESGEVI 953
>gi|145476893|ref|XP_001424469.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391533|emb|CAK57071.1| unnamed protein product [Paramecium tetraurelia]
Length = 784
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 26/269 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S ++ + F P + A+G IR++++K+ + HS + +
Sbjct: 480 SSAVWSVNFSPDGTTLASGSDDNSIRLWDVKT---GQQKAKLDGHS----------STVY 526
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G L SG D + +D++ + D H V SV++S L ASG
Sbjct: 527 SVNFSP--DGTTLASGSLDNSIRLWDVKTGQQKAKLDGH-SSTVNSVNFSPDGTTL-ASG 582
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++++WD + K + S V V F P G++L A+G D +DV K
Sbjct: 583 SLDNSIRLWDVKTGQQKA----KLDGHSSTVNSVNFSPDGTTL-ASGSLDNSIRLWDV-K 636
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
DGH TV + F D TL + D ++LW+V + GH + N V
Sbjct: 637 TGQQKAKLDGHSSTVNSVNFSPDGTTLASGSLDNSIRLWDVKTGQQKAKLDGHSSTVNSV 696
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G L GS N + ++DV+ G+
Sbjct: 697 NFS--PDGTTLASGSLDNSIRLWDVKTGQ 723
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 121 GVVMEYDLEKKVPIFERDEHGGRR----------VWSVDYSKGDPVLGASGSDDGTMQMW 170
G + E I+ RD G++ VWSV++S L ASGSDD ++++W
Sbjct: 449 GTTKAFGNEGNNSIYLRDVKTGQQKAKLDGHSSAVWSVNFSPDGTTL-ASGSDDNSIRLW 507
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + K + S V V F P G++L A+G D +DV K D
Sbjct: 508 DVKTGQQKA----KLDGHSSTVYSVNFSPDGTTL-ASGSLDNSIRLWDV-KTGQQKAKLD 561
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH TV + F D TL + D ++LW+V + GH + N V S G
Sbjct: 562 GHSSTVNSVNFSPDGTTLASGSLDNSIRLWDVKTGQQKAKLDGHSSTVNSVNFS--PDGT 619
Query: 290 LLGCGSETNQVFVYDVRWGE 309
L GS N + ++DV+ G+
Sbjct: 620 TLASGSLDNSIRLWDVKTGQ 639
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S ++ + F P + A+G + IR++++K+ + HS + +P
Sbjct: 522 SSTVYSVNFSPDGTTLASGSLDNSIRLWDVKT---GQQKAKLDGHSSTVNSVNFSP---- 574
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G L SG D + +D++ + D H V SV++S L ASG
Sbjct: 575 --------DGTTLASGSLDNSIRLWDVKTGQQKAKLDGH-SSTVNSVNFSPDGTTL-ASG 624
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++++WD + K + S V V F P G++L A+G D +DV K
Sbjct: 625 SLDNSIRLWDVKTGQQKA----KLDGHSSTVNSVNFSPDGTTL-ASGSLDNSIRLWDV-K 678
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
DGH TV + F D TL + D ++LW+V + GH + N V
Sbjct: 679 TGQQKAKLDGHSSTVNSVNFSPDGTTLASGSLDNSIRLWDVKTGQQKAKLDGHSSTVNSV 738
Query: 281 GLSVWRHGGLL--GCG 294
S G +L GCG
Sbjct: 739 NFS--PDGTILSFGCG 752
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 131/312 (41%), Gaps = 41/312 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P+ + A+ + IRI+++ V H HS +P
Sbjct: 77 VSFSPNGTTLASSSGDKSIRIWDVNIV---HDKSGGYGHSNYVRSVCYSPDDT------- 126
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR--RVWSVDYSKGDPVLGASGSDDG 165
+L SG D + +D++ ER G ++ V +SK D L ASGS D
Sbjct: 127 -----LLASGSGDKTIRLWDVKTGQ---ERQILKGHCSEIFQVCFSK-DGTLLASGSRDK 177
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
++++WD + K + V + F F +A+G DK +D+ +
Sbjct: 178 SIRLWDIKTGEEK----YRLEGHNGYVSTISF-SFDGITLASGSGDKTIRLWDIITGKE- 231
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ +GH V+ + F D+ TL + G D C++LWN + + GH + + S
Sbjct: 232 IQRLEGHNGYVSSVCFSPDIFTLASCGEDKCIRLWNAKTGQQASQFFGHTHQVYSICFS- 290
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTL 344
+G LL GS+ + ++DV+ G + ++ G V SVC+ D T+
Sbjct: 291 -PNGNLLASGSDDKSIRLWDVKEG--------QQISKLQGHSGGVISVCFS---PDGTTI 338
Query: 345 VAGGSDGLLHVF 356
++G +D + ++
Sbjct: 339 LSGSADQSIRLW 350
>gi|147775399|emb|CAN69414.1| hypothetical protein VITISV_026914 [Vitis vinifera]
Length = 606
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 24/245 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEH-GGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G S D S+ +L A+G+ GT++
Sbjct: 98 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE---LLVAAGAASGTIK 154
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V+FHPFG A+G D +D+RK +
Sbjct: 155 LWD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 208
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V IRF D +V+ G D +KLW++ +++ +K H + H
Sbjct: 209 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQLQCIDFH--PH 266
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS V +D + FE + +AG E V + + G+ TL+ G
Sbjct: 267 EFLLATGSADRTVKFWD--------LETFELIGSAGPETAGVRCMTFNPDGK---TLLCG 315
Query: 348 GSDGL 352
+ L
Sbjct: 316 LHESL 320
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 100/236 (42%), Gaps = 34/236 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P FA+G + ++I++I+ H H++ + TP
Sbjct: 177 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG---HTRGVNAIRFTP---------- 223
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D V +DL + + H G ++ +D+ + +L A+GS D T+
Sbjct: 224 --DGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEG-QLQCIDFHPHEFLL-ATGSADRTV 279
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+ WD + + + + P + V C+ F+P G +L+ K ++++ + D V
Sbjct: 280 KFWD--LETFELIGSAGPET--AGVRCMTFNPDGKTLLCGLHESLKVFSWEPIRCHDAV- 334
Query: 228 VFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V + R D++ L + C+ +W V+ SR+ G+V N
Sbjct: 335 -------DVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDLSRIEPYAVGNVTRLN 383
>gi|429198887|ref|ZP_19190676.1| DNA-binding helix-turn-helix protein [Streptomyces ipomoeae 91-03]
gi|428665407|gb|EKX64641.1| DNA-binding helix-turn-helix protein [Streptomyces ipomoeae 91-03]
Length = 1297
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 28/264 (10%)
Query: 49 EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYICTPAKLSSLKWKP 107
E+ P + AT +R++ + DH ++ + H++ +P
Sbjct: 984 EYSPDGKLLATADADHTVRLWGV----ADHRLLGTLRGHTETVFSVAFSP---------- 1029
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR L S DG + +D+ K+ P+ E H G V+SV +S L ++G+D T+
Sbjct: 1030 --DGRTLASASSDGTIRLWDVAKRAPLTELTGHTGE-VFSVAFSPDGRTLASAGADR-TV 1085
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD K + + V F P G +L +AG D +DV P+
Sbjct: 1086 RLWDVT----KRRELAKLTGHEDYANDVAFSPDGRTLASAGD-DLTVRLWDVASH-RPLT 1139
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH V + F D TL ++G DG ++LWNV + R+ + GH + + S
Sbjct: 1140 TLTGHTGAVRGVAFSPDGRTLASSGNDGTVRLWNVRERRLETSLTGHTGSARGIAFSP-- 1197
Query: 287 HGGLLGCGSETNQVFVYDVRWGEP 310
G L V ++DV P
Sbjct: 1198 DGRTLASSGNDRTVRLWDVAGRRP 1221
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 43/286 (15%)
Query: 111 GRVLGSGDYDGVVMEYDL--EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
GR L DG V +D+ E +V I H G + ++DY+ L ++G DD T++
Sbjct: 781 GRALAVATADGTVQLWDIAPEPRV-IASLPGHEGT-LNALDYAPDGRTLVSAG-DDRTVR 837
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD D + + ++ +V V F P G + +AG D+ +D R +
Sbjct: 838 LWD--TDRARPLDVLK--GHTDSVLGVAFSPDGRQVASAGV-DRTVRLWDARTGRE-TAT 891
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
F G + + + D +T+V A DG +LW++ R GH + +G+++
Sbjct: 892 FTGSSDDINAVAYTPDGNTVVGAVGDGTTRLWDIRSERQTAVLAGHTD--YVLGVALTSD 949
Query: 288 GGLLGCGSETNQVFVYDV-------RWGEPVWVHDFEP-----VTA-------------- 321
G LL V ++D+ R VW ++ P TA
Sbjct: 950 GTLLATAGFDQSVVLWDLGGPVLTPRPFTEVWQTEYSPDGKLLATADADHTVRLWGVADH 1009
Query: 322 --AGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF-VGKKKPLS 364
G+ RG +V D TL + SDG + ++ V K+ PL+
Sbjct: 1010 RLLGTLRGHTETVFSVAFSPDGRTLASASSDGTIRLWDVAKRAPLT 1055
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+ G R +R++++ + + H + +P
Sbjct: 1067 VAFSPDGRTLASAGADRTVRLWDVTK---RRELAKLTGHEDYANDVAFSP---------- 1113
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR L S D V +D+ P+ H G V V +S L +SG +DGT+
Sbjct: 1114 --DGRTLASAGDDLTVRLWDVASHRPLTTLTGHTGA-VRGVAFSPDGRTLASSG-NDGTV 1169
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ R + T ++R + F P G +L ++G D+ +DV P
Sbjct: 1170 RLWNVRERRLETSLTGHTGSARG----IAFSPDGRTLASSGN-DRTVRLWDVAGR-RPWA 1223
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND-SRVIR 268
GH V + F D T+ ++ TDG ++LW+++ SR+ R
Sbjct: 1224 TLTGHTNAVWGVAFAPDGRTVASSSTDGTVRLWDLDPGSRLAR 1266
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVD 245
AS V F P G +L A AD +D+ + GH T+ + + D
Sbjct: 767 ASTKGARAVSFDPRGRALAVA-TADGTVQLWDIAPEPRVIASLPGHEGTLNALDYAPDGR 825
Query: 246 TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
TLV+AG D ++LW+ + +R + KGH + + +G++ G + V ++D
Sbjct: 826 TLVSAGDDRTVRLWDTDRARPLDVLKGHTD--SVLGVAFSPDGRQVASAGVDRTVRLWDA 883
Query: 306 RWG 308
R G
Sbjct: 884 RTG 886
>gi|434386406|ref|YP_007097017.1| WD40 repeat-containing protein [Chamaesiphon minutus PCC 6605]
gi|428017396|gb|AFY93490.1| WD40 repeat-containing protein [Chamaesiphon minutus PCC 6605]
Length = 1234
Score = 70.9 bits (172), Expect = 1e-09, Method: Composition-based stats.
Identities = 78/305 (25%), Positives = 135/305 (44%), Gaps = 51/305 (16%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYN-----IKSVLVDHP-VVAVVDHSKVCDYYICTP 97
+I + F P + A G IR+++ ++S+L H V V +S V
Sbjct: 595 TIHALAFSPDGNCLACGDFNGDIRLWDTRTHQLQSILTGHTNWVQAVTYSPV-------- 646
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
G++L S +D V +DL + EH + V+SV +S +L
Sbjct: 647 -------------GQLLASSSFDCTVKLWDLSTGECLKTLTEHT-QGVYSVAFSPDGTIL 692
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYA 216
ASGSDD T+++WD + G+CV+++Q A+ + + V F P G ++A+G AD
Sbjct: 693 -ASGSDDCTVKLWD--VNSGQCVTSLQHEANPAHDIKSVTFSPDG-RIIASGGADCSIQL 748
Query: 217 YDVR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ ++ + V GH+ + + F D L + D KLW++ + T+ GH
Sbjct: 749 WHIQDGRNVTYWQTLTGHQSWIWSVAFSPDGKFLASGSDDTTAKLWDLATGECLHTFVGH 808
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV----------WVHDFE---PVT 320
+ V S G +L GS+ + ++D++ G+ V W + P+
Sbjct: 809 NDELRSVAFS--HDGRMLISGSKDRTIRLWDIQSGQRVKTLIGHENWIWAMALDPNRPIV 866
Query: 321 AAGSE 325
A+GSE
Sbjct: 867 ASGSE 871
Score = 44.7 bits (104), Expect = 0.074, Method: Composition-based stats.
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 22/210 (10%)
Query: 111 GRVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
GR+L SG D + + + + I H W + P L S D T+
Sbjct: 998 GRMLASGSTDHTIRIWSTQTGECLQILTGHMH-----WVMSVVFNSPDLLVSAGFDRTIN 1052
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
WD + G CV T Q S +C + F P G L+A+G ++ +DV +
Sbjct: 1053 FWDLQT--GACVRTWQIGQS---ICSIAFSPSGD-LLASGSIERTVGLWDVATGA-CLQT 1105
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH V + F D L + D ++LW+++ + ++ KGH + V + +H
Sbjct: 1106 LLGHSHFVWSVAFSPDGGFLASGSFDRTIRLWDLHTGQCLQVLKGHESGVFSVAF-IPQH 1164
Query: 288 GG------LLGCGSETNQVFVYDVRWGEPV 311
G LL S + ++D+ GE V
Sbjct: 1165 GTNSPDRQLLASSSADATIRIWDITTGECV 1194
Score = 44.3 bits (103), Expect = 0.092, Method: Composition-based stats.
Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 17/264 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I + DP+ + A+G R IR+++++S + + +S PA +L
Sbjct: 854 IWAMALDPNRPIVASGSEDRTIRLWSLES---GQCLKVIQGYSNTLFSIALVPAPALNLA 910
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
P + G +D +V + ++ + R +V G + G GS +
Sbjct: 911 NSP----VFVAGGYFDRLVRLWQIDTGKFTSFKGHTDAIRAIAVS-PDGRCLAGGGGSTE 965
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W G+C + S + V V F G ++A+G D + + +
Sbjct: 966 PTIKLWS--IQDGRCYRNL--SGHTNEVWSVAFSADGR-MLASGSTDHTIRIWSTQTG-E 1019
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ + GH V + F D LV+AG D + W++ +RT++ ++ ++
Sbjct: 1020 CLQILTGHMHWVMSVVFNSPDLLVSAGFDRTINFWDLQTGACVRTWQ---IGQSICSIAF 1076
Query: 285 WRHGGLLGCGSETNQVFVYDVRWG 308
G LL GS V ++DV G
Sbjct: 1077 SPSGDLLASGSIERTVGLWDVATG 1100
>gi|428298970|ref|YP_007137276.1| (myosin heavy-chain) kinase [Calothrix sp. PCC 6303]
gi|428235514|gb|AFZ01304.1| (Myosin heavy-chain) kinase [Calothrix sp. PCC 6303]
Length = 1474
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D V +++ + H VWSV +S D + ASGSDD T+++W
Sbjct: 1287 GQTLASGSNDHTVKLWNISTGKCYITLEGHTNE-VWSVSFSP-DGQIVASGSDDRTVKLW 1344
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + GKC+ST+Q + A+C V F P G +VA+G D+ +D+R +
Sbjct: 1345 DTQT--GKCISTLQGHSD--ALCSVTFSPSGQ-IVASGSYDRMIKLWDIRTGQCMKTFYA 1399
Query: 231 GHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH-VNNRNFVGL 282
G + + +D LV+ ++G +KLWN+ I+ N N G+
Sbjct: 1400 GVTRVRSVAFSVDGKILVSGNSNGTIKLWNIETGECIKILSDRPYENMNITGV 1452
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 141/317 (44%), Gaps = 38/317 (11%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D I + F P+ + A+G + +R+++ ++ V ++ H+ A + S
Sbjct: 937 DWINSVAFSPNGQLVASGSRDQTVRLWDTQT---GECVKILLSHT----------ASIRS 983
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ P G+ L SG D V + + ++H VWSV +S L A+GS
Sbjct: 984 TAFSP--DGKTLASGGDDCKVKLWSVSTGQLSKTLEDHIDI-VWSVIFSSDGTTL-ATGS 1039
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVRK 221
DGTM++WD C +C T++ + V V F P GS+LV+ G A D K +D+R
Sbjct: 1040 FDGTMKLWDV-C-ASQCFKTLK--GNIEIVFAVSFSPDGSTLVSGGRARDNKVELWDIRT 1095
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ V GH + D T+ + +D +K+W+ ++T +G+ R
Sbjct: 1096 G-ECVNTLRGHTSSSVSSLSFSPDGKTIASGSSDHTVKIWDTLTGECLKTLQGY--TRGI 1152
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
+ +S+ +G + GS + V ++++ GE + S +G +VC
Sbjct: 1153 LSVSISPNGQTIASGSFDHTVKLWNISTGECL-----------KSLQGHTGTVCSVTFSS 1201
Query: 340 DECTLVAGGSDGLLHVF 356
D TL +G DG + ++
Sbjct: 1202 DSLTLASGSHDGTVRLW 1218
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G+ + SG +D V +++ + H G V SV +S D + ASGS DGT+++
Sbjct: 1160 NGQTIASGSFDHTVKLWNISTGECLKSLQGHTGT-VCSVTFS-SDSLTLASGSHDGTVRL 1217
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD GKCV +Q +R + + F G +L A+G +D +++ D + +
Sbjct: 1218 WDTVS--GKCVKILQAHTNR--IKSISFSRDGKNL-ASGSSDHTIKLWNI-STGDCLNIL 1271
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
H + + F D TL + D +KLWN++ + T +GH N V S G
Sbjct: 1272 QSHTDDIMSVAFSPDGQTLASGSNDHTVKLWNISTGKCYITLEGHTNEVWSVSFS--PDG 1329
Query: 289 GLLGCGSETNQVFVYDVRWGE 309
++ GS+ V ++D + G+
Sbjct: 1330 QIVASGSDDRTVKLWDTQTGK 1350
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 10/175 (5%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
+ SV +S L ASGS+D T+++W+ GKC T++ + V V F P G +
Sbjct: 1278 IMSVAFSPDGQTL-ASGSNDHTVKLWN--ISTGKCYITLE--GHTNEVWSVSFSPDGQ-I 1331
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
VA+G D+ +D + + GH + + F +V +G+ D +KLW++
Sbjct: 1332 VASGSDDRTVKLWDTQTG-KCISTLQGHSDALCSVTFSPSGQIVASGSYDRMIKLWDIRT 1390
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
+ ++T+ V V SV G +L G+ + ++++ GE + + P
Sbjct: 1391 GQCMKTFYAGVTRVRSVAFSV--DGKILVSGNSNGTIKLWNIETGECIKILSDRP 1443
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D T+++WD G+C+ T+Q + V P G + +A+G D ++
Sbjct: 1123 ASGSSDHTVKIWDTLT--GECLKTLQ--GYTRGILSVSISPNGQT-IASGSFDHTVKLWN 1177
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + + GH TV + F D TL + DG ++LW+ + ++ + H N
Sbjct: 1178 I-STGECLKSLQGHTGTVCSVTFSSDSLTLASGSHDGTVRLWDTVSGKCVKILQAHTNRI 1236
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ S R G L GS + + ++++ G+
Sbjct: 1237 KSISFS--RDGKNLASGSSDHTIKLWNISTGD 1266
>gi|440752325|ref|ZP_20931528.1| WD domain, G-beta repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176818|gb|ELP56091.1| WD domain, G-beta repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 820
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++ +S V+ ++ DY++
Sbjct: 492 TDWICSVAFSPDGKTLISGSGDQTIRLWSGES----GKVIKILQEK---DYWVLLYQVAV 544
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S +G+++ S +D + +D+ EH +RVWS+ +S +L SG
Sbjct: 545 S------ANGQLIASTSHDNTIKLWDIRTDEKYTFSPEHQ-KRVWSIAFSPNSQML-VSG 596
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F G L+A G D+ + +
Sbjct: 597 SGDNSVKLWSVPR---GFCLKTFEEH--QAWVLSVNFSLDGK-LIATGSEDRTIKLWSIE 650
Query: 221 -KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +K+W V D R+I +++GH +
Sbjct: 651 DNMTQSLRTFKGHQGRIWSVVFSSDGQRLASSSDDQTVKVWQVKDGRLINSFEGHKSWVW 710
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV G+
Sbjct: 711 SVAFS--PDGKLLASGGDDATIRIWDVETGQ 739
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 8/202 (3%)
Query: 112 RVLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++
Sbjct: 200 ELLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIVKI 258
Query: 170 WDPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
W D C S PS A S +A G DK + V + + +
Sbjct: 259 WSITTDLSINCHSLPHPSQKHYAPIRAVTFSADSKFLATGSEDKTIKIWSV-ETGECLHT 317
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+GH++ V + F L+ +G+ D +K+W+V+ + + T GH + V S
Sbjct: 318 LEGHQERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQDWVWQVAFS--SD 375
Query: 288 GGLLGCGSETNQVFVYDVRWGE 309
G LL GS + ++ + GE
Sbjct: 376 GQLLASGSGDKTIKIWSIIEGE 397
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQM 169
G+++ +G D + + +E + R G + R+WSV +S L AS SDD T+++
Sbjct: 632 GKLIATGSEDRTIKLWSIEDNMTQSLRTFKGHQGRIWSVVFSSDGQRL-ASSSDDQTVKV 690
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + G+ +++ + +S V V F P G L+A+G D +DV L+
Sbjct: 691 W--QVKDGRLINSFE--GHKSWVWSVAFSPDGK-LLASGGDDATIRIWDVETGQLHQLLC 745
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+ H K+V + F + +TL +AG D +KLWN+ T +
Sbjct: 746 E-HTKSVRSVCFSPNGNTLASAGEDETIKLWNLKTGECQNTLR 787
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 117/278 (42%), Gaps = 27/278 (9%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ +G + F P+ + A+G + I+I+++ + H + D +
Sbjct: 323 ERVGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLTGHQDWVWQVAF---------- 372
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ G++L SG D + + +E + + +WS+ +S D ASG
Sbjct: 373 -----SSDGQLLASGSGDKTIKIWSIIEGEYQNIDTLTGHESWIWSIAFSP-DGQYIASG 426
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D T+++W + +C+ + +R + + F P S + +G D+ + ++
Sbjct: 427 SEDFTLRLWSVKTR--ECLQCFRGYGNR--LSSITFSP-DSQYILSGSIDRSIRLWSIKN 481
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ +GH + + F D TL++ D ++LW+ +VI+ +
Sbjct: 482 H-KCLQQINGHTDWICSVAFSPDGKTLISGSGDQTIRLWSGESGKVIKILQEKDYWVLLY 540
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
++V +G L+ S N + ++D+R E + F P
Sbjct: 541 QVAVSANGQLIASTSHDNTIKLWDIRTDEK---YTFSP 575
>gi|145515818|ref|XP_001443803.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411203|emb|CAK76406.1| unnamed protein product [Paramecium tetraurelia]
Length = 2929
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 29/271 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + F P + A+G R I +++IKS + + DH
Sbjct: 2160 SAPVHSVAFTPDSQLLASGSFDRTIILWDIKS---GKELKKLTDHDDGI----------- 2205
Query: 102 SLKWKPGTS--GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W S G+ L S D + +D++ I +R E + V+SV YS +LG
Sbjct: 2206 ---WSVAFSIDGQFLASASNDTTIRIWDVKSGKNI-QRLEGHTKTVYSVAYSPDGSILG- 2260
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S SDD ++++WD + G+ ++ ++ + V F P G + G D+ +D+
Sbjct: 2261 SASDDQSIRLWDTK--SGREMNMLE--GHLGLITSVAFSPDGLVFASGGGQDQSIRIWDL 2316
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + + DGH V I F L+ +G+ D ++LW+V + I +GH+N
Sbjct: 2317 KSGKE-LCRLDGHSGWVQSIAFCPKGQLIASGSSDTSVRLWDVESGKEISKLEGHLNWVC 2375
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S LL GSE + ++ ++ G+
Sbjct: 2376 SVAFS--PKEDLLASGSEDQSIILWHIKTGK 2404
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 63/289 (21%), Positives = 129/289 (44%), Gaps = 29/289 (10%)
Query: 24 DFNLRTTVSSSSSPNAAVSDSIG---VIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV 80
D+ +R + S +S G I + P + A+G +R++++ + +
Sbjct: 2013 DYTVRVWDTKSGKEILKLSGHTGWVRSIAYSPDGLIIASGSSDNTVRLWDVS---FGYLI 2069
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
+ + H+ ++ S+++ P G+++ S D + +D + + + H
Sbjct: 2070 LKLEGHTD----------QVRSVQFSP--DGQMIASASNDKSIRLWDPISGQQVNKLNGH 2117
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
G +WS +S +L ASGSDD T+++WD + +C+ + + V V F P
Sbjct: 2118 DGW-IWSATFSFVGHLL-ASGSDDLTIRIWDLK----QCLEIRKLEGHSAPVHSVAFTP- 2170
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLW 259
S L+A+G D+ +D++ + + D H + + F +D L +A D +++W
Sbjct: 2171 DSQLLASGSFDRTIILWDIKSGKELKKLTD-HDDGIWSVAFSIDGQFLASASNDTTIRIW 2229
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+V + I+ +GH V S G +LG S+ + ++D + G
Sbjct: 2230 DVKSGKNIQRLEGHTKTVYSVAYS--PDGSILGSASDDQSIRLWDTKSG 2276
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 27/266 (10%)
Query: 45 IGVIEFDPSDSVFATGGIA-RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
I + F P VFA+GG + IRI+++KS + + HS + S+
Sbjct: 2289 ITSVAFSPDGLVFASGGGQDQSIRIWDLKS---GKELCRLDGHS----------GWVQSI 2335
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P G+++ SG D V +D+E I + + H V SV +S + +L ASGS+
Sbjct: 2336 AFCP--KGQLIASGSSDTSVRLWDVESGKEISKLEGHLNW-VCSVAFSPKEDLL-ASGSE 2391
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D ++ +W + GK ++ + +V V F GS L +A D +D K+
Sbjct: 2392 DQSIILWHIKT--GKLITKLL--GHSDSVQSVAFSCDGSRLASAS-GDYLVKIWDT-KLG 2445
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+L H ++ + F + L +AG D ++LW+ + I +GH + +
Sbjct: 2446 QEILELSEHNDSLQCVIFSPNGQILASAGGDYIIQLWDAVSGQDIMKLEGHTDAVQ--SI 2503
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWG 308
+ + G +L GS + + ++D+ G
Sbjct: 2504 AFYPDGKVLASGSSDHSIRIWDITTG 2529
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 25/270 (9%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D I + F A+ IRI+++KS + + H+K + S
Sbjct: 2203 DGIWSVAFSIDGQFLASASNDTTIRIWDVKS---GKNIQRLEGHTKT----------VYS 2249
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P G +LGS D + +D + + + H G + SV +S V + G
Sbjct: 2250 VAYSP--DGSILGSASDDQSIRLWDTKSGREMNMLEGHLGL-ITSVAFSPDGLVFASGGG 2306
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D ++++WD + C + V + F P G L+A+G +D +DV
Sbjct: 2307 QDQSIRIWDLKSGKELC----RLDGHSGWVQSIAFCPKGQ-LIASGSSDTSVRLWDVESG 2361
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ + +GH V + F + L+ +G+ D + LW++ ++I GH ++ V
Sbjct: 2362 KE-ISKLEGHLNWVCSVAFSPKEDLLASGSEDQSIILWHIKTGKLITKLLGHSDSVQSVA 2420
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L S V ++D + G+ +
Sbjct: 2421 FSC--DGSRLASASGDYLVKIWDTKLGQEI 2448
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 64/273 (23%), Positives = 114/273 (41%), Gaps = 30/273 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D++ I F P V A+G IRI++I + + +D C Y
Sbjct: 2497 TDAVQSIAFYPDGKVLASGSSDHSIRIWDITT----GTEMQKIDGHTGCVY--------- 2543
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
S+ + P +G L S D ++ ++ + I E + G +W SV S L A
Sbjct: 2544 SIAFSP--NGEALVSASEDNSILLWNTKS---IKEMQQINGDTMWIYSVAQSPDQQSL-A 2597
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
D ++++WD + + + + V + F G ++ +AG DKK +++
Sbjct: 2598 LACIDYSIRLWDLKSEKER----QKLIGHSDQVEVIAFSADGQTMASAG-RDKKIRLWNL 2652
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ +D V + H T+ +RF D L + +D +++W V D+ + KGH
Sbjct: 2653 KSQID-VQILIAHSATIWSLRFSNDGLRLASGSSDTTIRIWVVKDTNQEKVLKGHTEAIQ 2711
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V + G LL S N + + + GE V
Sbjct: 2712 QVVFN--PEGKLLVSTSNDNTIRQWSLDTGEQV 2742
>gi|440680021|ref|YP_007154816.1| (Myosin heavy-chain) kinase [Anabaena cylindrica PCC 7122]
gi|428677140|gb|AFZ55906.1| (Myosin heavy-chain) kinase [Anabaena cylindrica PCC 7122]
Length = 1355
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 117/248 (47%), Gaps = 24/248 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG +D V +D++ + + H R VWSV +S GD + ASGS D T+++W
Sbjct: 920 GLTLASGSFDNTVKLWDVQTGYCVRTLEGHS-RVVWSVAWS-GDGLTLASGSSDETVKLW 977
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G CV T++ + V V + G +L A+G D +DV+ D V +
Sbjct: 978 DVQT--GDCVQTLEGHSD--WVNSVAWSGDGLTL-ASGSGDNTVKLWDVQTG-DCVQTLE 1031
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + + D TL + D +KLW+V ++T +GH N N V W G
Sbjct: 1032 GHGSGVYSVAWSGDGLTLASGSDDKTVKLWDVQTGDCVQTLEGHSNWVNSVA---WSGDG 1088
Query: 290 L-LGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
L L GS+ V ++DV+ G+ V + +V+SV W D TL +G
Sbjct: 1089 LTLASGSDDKTVKLWDVQTGDCVQTLE--------GHSNWVNSVVW---SGDGLTLASGS 1137
Query: 349 SDGLLHVF 356
D + ++
Sbjct: 1138 LDNTVKLW 1145
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 26/251 (10%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL + P +G+ L +GD DG V ++ I +H R VWSV +S GD + ASG
Sbjct: 829 SLAFSP--NGKYLVTGDSDGRVQIWNAVTGREILTFVDHS-RVVWSVAWS-GDGLTLASG 884
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD + G CV T++ + + V V + G +L A+G D +DV+
Sbjct: 885 SSDETVKLWDVQT--GDCVQTLEGHS--NGVRSVAWSGDGLTL-ASGSFDNTVKLWDVQT 939
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
V +GH + V + + D TL + +D +KLW+V ++T +GH + N V
Sbjct: 940 GY-CVRTLEGHSRVVWSVAWSGDGLTLASGSSDETVKLWDVQTGDCVQTLEGHSDWVNSV 998
Query: 281 GLSVWRHGGL-LGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
W GL L GS N V ++DV+ G+ V T G G V SV W
Sbjct: 999 A---WSGDGLTLASGSGDNTVKLWDVQTGDCV-------QTLEGHGSG-VYSVAW---SG 1044
Query: 340 DECTLVAGGSD 350
D TL +G D
Sbjct: 1045 DGLTLASGSDD 1055
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 101/203 (49%), Gaps = 13/203 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG D V +D++ + + H V+SVD+S D + ASGS D T+++W
Sbjct: 1130 GLTLASGSLDNTVKLWDVQTGDCVQTLESHS-NSVFSVDWSI-DSLTLASGSGDKTVKVW 1187
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G CV T++ RS V V + G +L A+G D+ +DV+ D V +
Sbjct: 1188 DVQT--GDCVQTLE--GHRSVVRSVAWSGDGLTL-ASGSGDETVKVWDVQTG-DCVQTLE 1241
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GHR V + + D TL + D +KLW+V ++T +GH + V W G
Sbjct: 1242 GHRSVVRSVAWSGDGLTLASVSFDKTVKLWDVQTGDCVQTLEGHSDGVRSVA---WSGDG 1298
Query: 290 L-LGCGSETNQVFVYDVRWGEPV 311
L L GS N V ++DV+ G+ +
Sbjct: 1299 LTLASGSFDNTVKLWDVQTGDCI 1321
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 22/247 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG D V +D++ + + HG V+SV +S GD + ASGSDD T+++W
Sbjct: 1004 GLTLASGSGDNTVKLWDVQTGDCVQTLEGHGSG-VYSVAWS-GDGLTLASGSDDKTVKLW 1061
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G CV T++ ++ V V + G +L A+G DK +DV+ D V +
Sbjct: 1062 DVQT--GDCVQTLEGHSN--WVNSVAWSGDGLTL-ASGSDDKTVKLWDVQTG-DCVQTLE 1115
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + + D TL + D +KLW+V ++T + H N+ V S+
Sbjct: 1116 GHSNWVNSVVWSGDGLTLASGSLDNTVKLWDVQTGDCVQTLESHSNSVFSVDWSI--DSL 1173
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
L GS V V+DV+ G+ V + R V SV W D TL +G
Sbjct: 1174 TLASGSGDKTVKVWDVQTGDCVQTLE--------GHRSVVRSVAW---SGDGLTLASGSG 1222
Query: 350 DGLLHVF 356
D + V+
Sbjct: 1223 DETVKVW 1229
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 81/192 (42%), Gaps = 19/192 (9%)
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
G + G +++ G + A A+ + F P G LV G +D + ++
Sbjct: 797 GVNFGLASLYNVNLKGANLTDALFAKA-LGAIYSLAFSPNGKYLVT-GDSDGRVQIWNAV 854
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ +L F H + V + + D TL + +D +KLW+V ++T +GH N
Sbjct: 855 TGRE-ILTFVDHSRVVWSVAWSGDGLTLASGSSDETVKLWDVQTGDCVQTLEGHSNGVRS 913
Query: 280 VGLSVWRHGGL-LGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
V W GL L GS N V ++DV+ G V T G R V SV W
Sbjct: 914 VA---WSGDGLTLASGSFDNTVKLWDVQTGYCV-------RTLEGHSR-VVWSVAW---S 959
Query: 339 EDECTLVAGGSD 350
D TL +G SD
Sbjct: 960 GDGLTLASGSSD 971
>gi|301111686|ref|XP_002904922.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095252|gb|EEY53304.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 958
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 13/189 (6%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRR-VWSVDYSKGDPVLGA 159
++W P S +L + +G V+ ++LE+ + ER +G RR V + + D +
Sbjct: 70 IRWHP-HSDYLLATAATNGAVVIWNLERDGYKHVQERVFNGHRRAVNRICWHTSDWNVLI 128
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS DGT+++WD R GGK VST QP + +V V PF S+ AA + +D+
Sbjct: 129 SGSQDGTVKLWDKR--GGKVVSTYQPKS--ESVRDVRASPFHSNKFAAAFENGIVQVWDM 184
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
RK L F H+ V I + D + L + G D +K+W + D +R K +
Sbjct: 185 RKNSQAELKFTAHKGLVLSIDWHPTDANVLASGGRDRYVKIWELGD---VRQPKQTIQTI 241
Query: 278 NFVGLSVWR 286
VG WR
Sbjct: 242 ASVGRVAWR 250
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 17/162 (10%)
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVR----KMVDPVLVFDGHRKTVTYI--RFLDVDTLV 248
+ +HP L+A + +++ K V VF+GHR+ V I D + L+
Sbjct: 70 IRWHPHSDYLLATAATNGAVVIWNLERDGYKHVQE-RVFNGHRRAVNRICWHTSDWNVLI 128
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ DG +KLW+ +V+ TY+ + V S + H E V V+D+R
Sbjct: 129 SGSQDGTVKLWDKRGGKVVSTYQPKSESVRDVRASPF-HSNKFAAAFENGIVQVWDMR-- 185
Query: 309 EPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
+ + + +G V S+ W D L +GG D
Sbjct: 186 -----KNSQAELKFTAHKGLVLSIDWHPT--DANVLASGGRD 220
>gi|186686180|ref|YP_001869376.1| hypothetical protein Npun_F6147 [Nostoc punctiforme PCC 73102]
gi|186468632|gb|ACC84433.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
Length = 1174
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 34/288 (11%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P ++ A+ G IR++ + ++ V +V H ++ ++
Sbjct: 632 SVNAVAFSPKGNIVASCGQDLSIRLWEVAPEKLNPEVQTLVGHE----------GRVWAI 681
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P +G++L S D + +D+ H R + S+ +S D L ASGS
Sbjct: 682 AFHP--NGKILASCSEDYTIRLWDVATGNCFCVWQGHD-RWLRSITFSP-DGKLLASGSY 737
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++WD + KC+ T++ R V + F P G L A+ D+ +DV
Sbjct: 738 DNTIKLWDVKSQ--KCLQTLR--GHRQTVTAIAFSPNGQQL-ASSSFDRTVKLWDVSG-- 790
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ + F GH + + + + LV+ G D KLWN+ R +T KGH N + + L
Sbjct: 791 NCLKTFLGHSSRLWSVAYHPNEQQLVSGGDDHATKLWNLQIGRCTKTLKGHTN--SVLSL 848
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWG----------EPVWVHDFEPVT 320
+ L G E + ++D++ G VW F+P +
Sbjct: 849 APSPDSNYLASGHEDQTIKLWDIKNGTLVQTLREHTNRVWSVAFQPAS 896
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 72/288 (25%), Positives = 120/288 (41%), Gaps = 44/288 (15%)
Query: 4 FHDHQQPQAETTNERARCEWDFN---LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATG 60
F + Q A ++ +R WD + L+T + SS + + + P++ +G
Sbjct: 767 FSPNGQQLASSSFDRTVKLWDVSGNCLKTFLGHSSR--------LWSVAYHPNEQQLVSG 818
Query: 61 GIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYD 120
G +++N++ + + H+ S L P L SG D
Sbjct: 819 GDDHATKLWNLQ---IGRCTKTLKGHTN------------SVLSLAPSPDSNYLASGHED 863
Query: 121 GVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD--PVLGASGSDDGTMQMWDPRCDGGK 178
+ +D++ + EH R VWSV + P+L ASGS D ++++WD + G
Sbjct: 864 QTIKLWDIKNGTLVQTLREHTNR-VWSVAFQPASQHPLL-ASGSADYSIKLWDWKL--GT 919
Query: 179 CVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTY 238
C+ T+ S V V F P G L A+ D+ +D+ + + F GH V
Sbjct: 920 CLQTLH--GHTSWVWTVVFSPDGRQL-ASSSYDQTVKLWDINTG-ECLKTFKGHNSPVVS 975
Query: 239 IRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+ F D L ++ DG +KLWN++ +T GH N SVW
Sbjct: 976 VAFSPDGQLLASSEFDGMIKLWNIDTGECRQTLTGHTN-------SVW 1016
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS-SLVAAGCADKKAYAY 217
ASG +D T+++WD + G V T++ +R V V F P L+A+G AD +
Sbjct: 858 ASGHEDQTIKLWDIK--NGTLVQTLREHTNR--VWSVAFQPASQHPLLASGSADYSIKLW 913
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D K+ + GH V + F D L ++ D +KLW++N ++T+KGH N
Sbjct: 914 D-WKLGTCLQTLHGHTSWVWTVVFSPDGRQLASSSYDQTVKLWDINTGECLKTFKGH--N 970
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE----------PVWVHDFEP 318
V ++ G LL + ++++ GE VW F P
Sbjct: 971 SPVVSVAFSPDGQLLASSEFDGMIKLWNIDTGECRQTLTGHTNSVWSVTFSP 1022
Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
L S+ + P G++L SG YD + +D++ + + H + V ++ +S L A
Sbjct: 720 LRSITFSP--DGKLLASGSYDNTIKLWDVKSQKCLQTLRGHR-QTVTAIAFSPNGQQL-A 775
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD G C+ T +SR + V +HP LV+ G D A
Sbjct: 776 SSSFDRTVKLWDV---SGNCLKTFLGHSSR--LWSVAYHPNEQQLVSGG--DDHATKLWN 828
Query: 220 RKMVDPVLVFDGHRKTVTYIR-FLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
++ GH +V + D + L + D +KLW++ + +++T + H N
Sbjct: 829 LQIGRCTKTLKGHTNSVLSLAPSPDSNYLASGHEDQTIKLWDIKNGTLVQTLREHTNRVW 888
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
V LL GS + ++D + G
Sbjct: 889 SVAFQPASQHPLLASGSADYSIKLWDWKLG 918
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 12/201 (5%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ L + D G + +D+ V R WSV +S L AS SDD ++
Sbjct: 556 SDGQYLATSDTKGDIQIWDVST-VKQLVRCRGHQHWAWSVAFSPDGRYL-ASASDDYLVK 613
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV--RKMVDPV 226
+WD + G+C+ T Q +V V F P G ++VA+ D ++V K+ V
Sbjct: 614 LWD--VETGQCLHTYQ--GHTYSVNAVAFSPKG-NIVASCGQDLSIRLWEVAPEKLNPEV 668
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
GH V I F + L + D ++LW+V ++GH +R ++
Sbjct: 669 QTLVGHEGRVWAIAFHPNGKILASCSEDYTIRLWDVATGNCFCVWQGH--DRWLRSITFS 726
Query: 286 RHGGLLGCGSETNQVFVYDVR 306
G LL GS N + ++DV+
Sbjct: 727 PDGKLLASGSYDNTIKLWDVK 747
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 64/273 (23%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 4 FHDHQQPQAETTNERARCEWDFNL-RTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGI 62
+H ++Q ++ A W+ + R T + N+ +S + P + A+G
Sbjct: 808 YHPNEQQLVSGGDDHATKLWNLQIGRCTKTLKGHTNSVLS-----LAPSPDSNYLASGHE 862
Query: 63 ARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGV 122
+ I++++IK+ + V + +H+ ++ S+ ++P + +L SG D
Sbjct: 863 DQTIKLWDIKNGTL---VQTLREHTN----------RVWSVAFQPASQHPLLASGSADYS 909
Query: 123 VMEYDLEKKVPIFERDEHGGRR-VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVS 181
+ +D K+ + HG VW+V +S L AS S D T+++WD + G+C+
Sbjct: 910 IKLWDW--KLGTCLQTLHGHTSWVWTVVFSPDGRQL-ASSSYDQTVKLWD--INTGECLK 964
Query: 182 TVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
T + S V V F P G L+A+ D +++ + GH +V + F
Sbjct: 965 TFK--GHNSPVVSVAFSPDGQ-LLASSEFDGMIKLWNI-DTGECRQTLTGHTNSVWSVTF 1020
Query: 242 L-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ L++ D LKLW V+ + ++T+ GH
Sbjct: 1021 SPNGQWLLSTSFDRTLKLWLVSTGKCLQTFVGH 1053
>gi|427720862|ref|YP_007068856.1| WD-40 repeat-containing protein [Calothrix sp. PCC 7507]
gi|427353298|gb|AFY36022.1| WD-40 repeat-containing protein [Calothrix sp. PCC 7507]
Length = 1713
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPV 156
+++S+ + P G++L SG D + + L K + F+ D + SV++S +
Sbjct: 1486 RVTSVSFSP--DGQMLASGSADKTIKLWRLADGKLLQTFKGDTE---EITSVNFSPDGQM 1540
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADKKAY 215
L ASGS D T+++W R DG S V+ A+ V+F P G L +A +
Sbjct: 1541 L-ASGSYDNTVKLW--RLDG----SLVRSLPGHGLAIASVKFSPDGKILASASMDN---- 1589
Query: 216 AYDVRKMVDPVLV--FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+ ++ D L+ GH VT + FL D L + DG +KLWN+ND +++T G
Sbjct: 1590 TIKLWQVADGTLINTLAGHTNGVTSLSFLPDSQILASGSADGTIKLWNINDGTLLKTLLG 1649
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
H N LS G +L GSE V ++D+
Sbjct: 1650 HPGKVN--SLSFSPDGKVLISGSEDAGVMLWDL 1680
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 61/262 (23%), Positives = 113/262 (43%), Gaps = 34/262 (12%)
Query: 27 LRTTVSSSSSPN--AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVV 84
L+ VS S N + + F P A+ + I+I+N++ L+
Sbjct: 1089 LQQAVSQSPEINRLQGHGQQVNAVSFSPDGKFIASASDDQTIKIWNLQGKLI-------- 1140
Query: 85 DHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR 144
+ + Y ++++++ + P + + + SG D V YD+ K + +
Sbjct: 1141 --TTITGY----QSRITTISFSPDS--QFIVSGSTDKTVKVYDINGK--LIQTFTGHNNI 1190
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V V +S ++ AS S D T+++W R DG S +A V + F P G +
Sbjct: 1191 VTDVAFSPDGKII-ASASRDKTIKLW--RIDGSLIKSW---NAHNGWVNTIAFSPDG-QI 1243
Query: 205 VAAGCADKKAYAYDVRKMVDPVLV--FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+A+G D + + VD L+ GH++ VT I+F + + TA D +K+W+
Sbjct: 1244 LASGGEDNLVKLW---QTVDSKLIKAIAGHKERVTCIKFSPNGQMIATASGDRTMKIWH- 1299
Query: 262 NDSRVIRTYKGHVNNRNFVGLS 283
+ ++T +G N N + S
Sbjct: 1300 RQGKFLQTIEGSANQINSISFS 1321
Score = 44.7 bits (104), Expect = 0.079, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 35/264 (13%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPA 98
A + + I+F P+ + AT R ++I++ K +
Sbjct: 1268 AGHKERVTCIKFSPNGQMIATASGDRTMKIWH--------------RQGKFLQTIEGSAN 1313
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI---FERDEHG-GRRVWSVDYSKGD 154
+++S+ + P G++L D DG+V + L+ + I ++ G G +V V +S D
Sbjct: 1314 QINSISFSP--DGKLLADADADGIVKIWSLKHQAKIEYALKQTLLGHGAQVTDVSFS-AD 1370
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
+ AS S D T+++W ++ + + V FHP AAG D
Sbjct: 1371 GKIVASASADKTVRLWQ--------LNNISKPQYEGSFYGVSFHPKRQIFAAAGW-DGNI 1421
Query: 215 YAYDVRKMVDPVL--VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+ V L G+R+ + + F + T+ A D +KLW V + +++
Sbjct: 1422 NIWRKNDAVTQSLFKTILGNRRIIFALDFSPNGKTIAAASDDKTIKLWYVANGSLMQILT 1481
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGS 295
GH V S G +L GS
Sbjct: 1482 GHTERVTSVSFS--PDGQMLASGS 1503
Score = 41.6 bits (96), Expect = 0.63, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 99/249 (39%), Gaps = 38/249 (15%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLV-----------------DHPVVAVVDHS 87
I I F P +G + +++Y+I L+ D ++A
Sbjct: 1150 ITTISFSPDSQFIVSGSTDKTVKVYDINGKLIQTFTGHNNIVTDVAFSPDGKIIASASRD 1209
Query: 88 KVCDYYICTPAKLSSLKWKPG--------TSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
K + + + S G G++L SG D +V + I
Sbjct: 1210 KTIKLWRIDGSLIKSWNAHNGWVNTIAFSPDGQILASGGEDNLVKLWQTVDSKLIKAIAG 1269
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H RV + +S ++ A+ S D TM++W + GK + T++ SA++ + + F P
Sbjct: 1270 H-KERVTCIKFSPNGQMI-ATASGDRTMKIWHRQ---GKFLQTIEGSANQ--INSISFSP 1322
Query: 200 FGSSLVAAGCADK--KAYAYDVRKMVDPVL--VFDGHRKTVTYIRF-LDVDTLVTAGTDG 254
G L+A AD K ++ + ++ L GH VT + F D + +A D
Sbjct: 1323 DG-KLLADADADGIVKIWSLKHQAKIEYALKQTLLGHGAQVTDVSFSADGKIVASASADK 1381
Query: 255 CLKLWNVND 263
++LW +N+
Sbjct: 1382 TVRLWQLNN 1390
>gi|307150171|ref|YP_003885555.1| sigma 54 interacting domain-containing protein [Cyanothece sp. PCC
7822]
gi|306980399|gb|ADN12280.1| Sigma 54 interacting domain protein [Cyanothece sp. PCC 7822]
Length = 1290
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 30/264 (11%)
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P T G ++ SG DG V +D + P+ E R V SV +S D + +GS D T
Sbjct: 871 PQTEGGIIVSGSRDGTVRLWDKQGN-PLAEPFRGHKRIVTSVAFSP-DGEMIVTGSQDDT 928
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD + G ++ R V V F P G +V+A DK +D K +P+
Sbjct: 929 VRLWDKK---GNPIAEPLRGHER-GVTSVAFSPDGEMIVSA-SQDKTVRLWD--KKGNPI 981
Query: 227 LV-FDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
F GH++ VT + F ++T+G+ D + LW+ + + +GH N V S
Sbjct: 982 AEPFRGHKRIVTSVAFSPDGEMITSGSKDKTVWLWDKKGNPIGEPLRGHENGVTSVAFS- 1040
Query: 285 WRHGGLLGCGSETNQVFVYDVR---WGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
R G ++ GSE V ++D + GEP+ H+ PVT SV + R GE
Sbjct: 1041 -RDGEMIVSGSEDKTVRLWDKKGNPIGEPLRGHE-NPVT----------SVAFSRDGE-- 1086
Query: 342 CTLVAGGSDGLLHVFVGKKKPLSA 365
+V+G D + ++ + P++A
Sbjct: 1087 -MIVSGSEDKTVRLWDKQGNPIAA 1109
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 28/262 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + TG +R+++ K + P+ H + ++S+ + P
Sbjct: 911 VAFSPDGEMIVTGSQDDTVRLWDKKGNPIAEPLRG---HER----------GVTSVAFSP 957
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G ++ S D V +D +K PI E R V SV +S D + SGS D T+
Sbjct: 958 --DGEMIVSASQDKTVRLWD-KKGNPIAEPFRGHKRIVTSVAFSP-DGEMITSGSKDKTV 1013
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV- 226
+WD + G ++ + V V F G ++ +G DK +D K +P+
Sbjct: 1014 WLWDKK--GNPIGEPLR--GHENGVTSVAFSRDGE-MIVSGSEDKTVRLWD--KKGNPIG 1066
Query: 227 LVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
GH VT + F D + +V+ D ++LW+ + + ++GH N N V S
Sbjct: 1067 EPLRGHENPVTSVAFSRDGEMIVSGSEDKTVRLWDKQGNPIAAPFRGHENRVNSVAFSP- 1125
Query: 286 RHGGLLGCGSETNQVFVYDVRW 307
G ++ GS+ V ++ W
Sbjct: 1126 -DGEIIVSGSDDKTVRLWRGSW 1146
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 30/263 (11%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G ++ SG +D V +D + + I E V SV +S D + SGS D T++
Sbjct: 743 SDGEMIVSGSWDKTVRLWDKQGNL-IAEPFRGHEDYVTSVAFS-SDGEMIVSGSWDKTVR 800
Query: 169 MWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+WD + G ++ +P V V F G ++ +G D+ +D K +P+
Sbjct: 801 LWDKQ---GNLIA--EPFIGHENWVTSVAFSSDGE-MIVSGSEDETVRLWD--KQGNPIA 852
Query: 228 V-FDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
F GH VT + F + +V+ DG ++LW+ + + ++GH R
Sbjct: 853 EPFRGHESYVTSVAFSPLPQTEGGIIVSGSRDGTVRLWDKQGNPLAEPFRGH--KRIVTS 910
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
++ G ++ GS+ + V ++D + G P+ EP+ G ERG V+SV + GE
Sbjct: 911 VAFSPDGEMIVTGSQDDTVRLWDKK-GNPI----AEPLR--GHERG-VTSVAFSPDGE-- 960
Query: 342 CTLVAGGSDGLLHVFVGKKKPLS 364
+V+ D + ++ K P++
Sbjct: 961 -MIVSASQDKTVRLWDKKGNPIA 982
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 15/197 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G ++ SG +D V +D +K PI E V SV +S+ D + SGS D T+++W
Sbjct: 577 GEMIVSGSWDNTVRLWD-KKGNPIAEPLRGHESTVESVAFSR-DGEMIVSGSWDNTVRLW 634
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLV 228
D + G ++ S V V F P G ++ +G D +D + + DP
Sbjct: 635 DKK--GNPIAEPLR--GHESTVESVAFSPDGE-MIVSGSGDDTVRLWDKKGSPIADP--- 686
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
F H V + F D + +V+ D ++LW+ + + ++GH + V S
Sbjct: 687 FKVHESIVNSVAFSSDGEMIVSGSWDDTVRLWDKQGNLIAEPFRGHESYVTSVAFS--SD 744
Query: 288 GGLLGCGSETNQVFVYD 304
G ++ GS V ++D
Sbjct: 745 GEMIVSGSWDKTVRLWD 761
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
Y V + V + F GH + VT + F D + +V+ D ++LW+ + + +GH +
Sbjct: 549 YLVMERVKKSIPFCGHERGVTSVAFSRDGEMIVSGSWDNTVRLWDKKGNPIAEPLRGHES 608
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
V S R G ++ GS N V ++D + G P+ EP+ RG S+V
Sbjct: 609 TVESVAFS--RDGEMIVSGSWDNTVRLWDKK-GNPI----AEPL------RGHESTVESV 655
Query: 336 RVGEDECTLVAGGSDGLLHVFVGKKKPLS 364
D +V+G D + ++ K P++
Sbjct: 656 AFSPDGEMIVSGSGDDTVRLWDKKGSPIA 684
>gi|428317867|ref|YP_007115749.1| serine/threonine protein kinase with WD40 repeats [Oscillatoria
nigro-viridis PCC 7112]
gi|428241547|gb|AFZ07333.1| serine/threonine protein kinase with WD40 repeats [Oscillatoria
nigro-viridis PCC 7112]
Length = 695
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 32/276 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + +P ++ A+ + I+++++++ H HS D +P
Sbjct: 408 SAQVNAVVINPQGNILASASDDKTIKLWDLQTGEFIH---TFFGHSATVDAVAISP---- 460
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFE-------RDEHGGRRVWSVDYSKGD 154
GR++ SG +D V+E+ L+KK I E H V+SV +S
Sbjct: 461 --------DGRMMVSGSFDRKVIEWKLDKKAMIREFYSAFGSPYSHRYGPVYSVAFSCDS 512
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
+ AS S D ++++W+ R G V + S V V F P S ++A+G ADK
Sbjct: 513 GAI-ASASGDKSIKLWNQR--NGALVQKL--SGHSEKVLSVSFRP-QSMMLASGSADKTI 566
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ V + + V F GH V I F D +V+ D +KLWN + +I T +GH
Sbjct: 567 KMWLV-GIGESVRTFVGHSDWVYAIAFSQDGKMIVSGSADATVKLWNADTGELINTLRGH 625
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ V +S R + GS V ++++ GE
Sbjct: 626 SDAVISVAMSPDRE--TMASGSRDGTVKLWNLETGE 659
>gi|436670175|ref|YP_007317914.1| WD40 repeat-containing protein [Cylindrospermum stagnale PCC 7417]
gi|428262447|gb|AFZ28396.1| WD40 repeat-containing protein [Cylindrospermum stagnale PCC 7417]
Length = 1223
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 77/260 (29%), Positives = 122/260 (46%), Gaps = 26/260 (10%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
++ S+ + P G+ L S D V +DL+ + H R VWS+ +S L
Sbjct: 933 EIRSVSFSP--DGQTLASAGEDHTVKLWDLKTGQCLRTLRGHI-RWVWSITFSPDGQTL- 988
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D T+++WD + G+C+ + A V V F P G +L A+G D ++
Sbjct: 989 ASGSGDHTVKLWDVKT--GQCLQNLH--AENHGVLSVTFSPDGFTL-ASGSYDHTVKLWN 1043
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNR 277
V K + GH+ V I F ++ +G+ D LKLW+VN S T +GH R
Sbjct: 1044 V-KTGQCLRTLQGHKGWVWSITFSPNGQILGSGSGDHTLKLWDVNTSECFSTLEGH---R 1099
Query: 278 NFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRR 336
+V ++ +G +LG GS V ++DV+ + + T G RG V SV +
Sbjct: 1100 GWVCSITFSPNGQILGSGSMDQTVKLWDVKNSQYL-------KTLHGHTRG-VLSVSFSP 1151
Query: 337 VGEDECTLVAGGSDGLLHVF 356
G+ TL++ D L ++
Sbjct: 1152 SGQ---TLISSSEDETLRIW 1168
Score = 68.6 bits (166), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG YD V ++++ + H G VWS+ +S +LG SGS D T+++W
Sbjct: 1027 GFTLASGSYDHTVKLWNVKTGQCLRTLQGHKGW-VWSITFSPNGQILG-SGSGDHTLKLW 1084
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + +C ST++ R VC + F P G ++ +G D+ +DV K +
Sbjct: 1085 D--VNTSECFSTLE--GHRGWVCSITFSPNGQ-ILGSGSMDQTVKLWDV-KNSQYLKTLH 1138
Query: 231 GHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRT------YKGHVNNRNFVGLS 283
GH + V + F TL+++ D L++W+++ S RT Y+G +N N GL+
Sbjct: 1139 GHTRGVLSVSFSPSGQTLISSSEDETLRIWHISTSECRRTLRSKKLYEG-MNITNLTGLT 1197
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 118/268 (44%), Gaps = 30/268 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ I F+ S+ A+G + I+++NI + + + H + + SL
Sbjct: 641 VPAIAFNHDSSILASGSEDQTIKLWNI---ITGQCLNTLQGHEQ----------GIWSLV 687
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ T G+VL SG D ++++ + EH + V +V + D +L SGS D
Sbjct: 688 FS--TDGQVLVSGSDDKTAKIWEVKTGQCLKTLSEHQ-KMVRAVVLTPDDKIL-VSGSVD 743
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASR--SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
T+++WD GKC+ T+Q SA + H L+A+ D +D+
Sbjct: 744 KTLKLWD--VGTGKCLRTLQEHEEGVWSAAVSSDGH-----LLASASGDNTVKIWDLHTG 796
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ GH V + F D TLVT D +KLW+V+D ++T GH N V
Sbjct: 797 -KCLKTLQGHTNWVISVAFSPDGQTLVTGSWDHTIKLWSVSDGACLKTLPGHNNMVRVVK 855
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G LL GS+ + ++DV G+
Sbjct: 856 FS--PDGKLLASGSDDQSLRLWDVNTGQ 881
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASR--SAVCCVEFHPFGSSLVAAGCAD 211
D L ASGSDD ++++WD + G+C+ T+ +S+ S C + SS ++
Sbjct: 859 DGKLLASGSDDQSLRLWD--VNTGQCLKTIYGYSSKIWSIACSSDGQMLASS------SN 910
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTY 270
K +D + + GH + + F D TL +AG D +KLW++ + +RT
Sbjct: 911 KTVKLWDFNTGHN-FKILTGHNHEIRSVSFSPDGQTLASAGEDHTVKLWDLKTGQCLRTL 969
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+GH+ R ++ G L GS + V ++DV+ G+
Sbjct: 970 RGHI--RWVWSITFSPDGQTLASGSGDHTVKLWDVKTGQ 1006
Score = 57.8 bits (138), Expect = 9e-06, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 112 RVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGSDDGTM 167
+ L GD +G + Y ++ K++ IF+ G W ++ ++ +L ASGS+D T+
Sbjct: 609 KFLAIGDINGEICLYQVDDWKQLNIFK-----GHTNWVPAIAFNHDSSIL-ASGSEDQTI 662
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ G+C++T+Q + + F G LV +G DK A ++V K +
Sbjct: 663 KLWN--IITGQCLNTLQ--GHEQGIWSLVFSTDGQVLV-SGSDDKTAKIWEV-KTGQCLK 716
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
H+K V + D ++ +G+ D LKLW+V + +RT + H +V
Sbjct: 717 TLSEHQKMVRAVVLTPDDKILVSGSVDKTLKLWDVGTGKCLRTLQEH--EEGVWSAAVSS 774
Query: 287 HGGLLGCGSETNQVFVYDVRWGE 309
G LL S N V ++D+ G+
Sbjct: 775 DGHLLASASGDNTVKIWDLHTGK 797
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 35/273 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++ + V++F P + A+G + +R++++ ++ C + T S
Sbjct: 848 NNMVRVVKFSPDGKLLASGSDDQSLRLWDV--------------NTGQC---LKTIYGYS 890
Query: 102 SLKWKPGTS--GRVLGSGDYDGVVM-EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
S W S G++L S V + +++ I H + SV +S L
Sbjct: 891 SKIWSIACSSDGQMLASSSNKTVKLWDFNTGHNFKILTGHNH---EIRSVSFSPDGQTLA 947
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
++G +D T+++WD + G+C+ T++ V + F P G +L A+G D +D
Sbjct: 948 SAG-EDHTVKLWDLKT--GQCLRTLR--GHIRWVWSITFSPDGQTL-ASGSGDHTVKLWD 1001
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
V K + V + F D TL + D +KLWNV + +RT +GH +
Sbjct: 1002 V-KTGQCLQNLHAENHGVLSVTFSPDGFTLASGSYDHTVKLWNVKTGQCLRTLQGH---K 1057
Query: 278 NFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+V ++ +G +LG GS + + ++DV E
Sbjct: 1058 GWVWSITFSPNGQILGSGSGDHTLKLWDVNTSE 1090
>gi|359484098|ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Vitis vinifera]
Length = 800
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 110/245 (44%), Gaps = 24/245 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEH-GGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G S D S+ +L A+G+ GT++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE---LLVAAGAASGTIK 84
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V+FHPFG A+G D +D+RK +
Sbjct: 85 LWD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 138
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V IRF D +V+ G D +KLW++ +++ +K H + H
Sbjct: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQLQCIDFHP--H 196
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS V +D + FE + +AG E V + + G+ TL+ G
Sbjct: 197 EFLLATGSADRTVKFWD--------LETFELIGSAGPETAGVRCMTFNPDGK---TLLCG 245
Query: 348 GSDGL 352
+ L
Sbjct: 246 LHESL 250
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S+V C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEL 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 R 306
R
Sbjct: 131 R 131
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 104/237 (43%), Gaps = 36/237 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSLKWK 106
++F P FA+G + ++I++I+ K C + Y ++++++
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIR--------------KKGCIHTYKGHTRGVNAIRFT 152
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + SG D V +DL + + H G ++ +D+ + +L A+GS D T
Sbjct: 153 P--DGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEG-QLQCIDFHPHEFLL-ATGSADRT 208
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
++ WD + + + + P + V C+ F+P G +L+ K ++++ + D V
Sbjct: 209 VKFWD--LETFELIGSAGPET--AGVRCMTFNPDGKTLLCGLHESLKVFSWEPIRCHDAV 264
Query: 227 LVFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V + R D++ L + C+ +W V+ SR+ G+V N
Sbjct: 265 --------DVGWSRLSDLNIHEGKLLGCSYNQSCVGVWVVDLSRIEPYAVGNVTRLN 313
>gi|145528438|ref|XP_001450017.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417609|emb|CAK82620.1| unnamed protein product [Paramecium tetraurelia]
Length = 933
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 133/310 (42%), Gaps = 37/310 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S +I + F P + A+G IR+++++ ++ + H+ Y +C
Sbjct: 504 SSTIYSVSFSPDGTTLASGSSDNSIRLWDVE---LEQQKAKLDGHNSTI-YSLC------ 553
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ P +G L SG D + +D++ E H V+SV +S D L ASG
Sbjct: 554 ---FSP--NGTTLASGSSDNTLRLWDVKSGQQNIELVSHTS-TVYSVCFSPDDITL-ASG 606
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++++WD + K + S V + F P G++L A+G DK +DV K
Sbjct: 607 SADKSIRLWDVKTGNQK----AKLDGHNSTVYSINFSPDGATL-ASGSYDKSIRLWDV-K 660
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ DGH T+ + F D TL + D ++LW+V + GH V
Sbjct: 661 TGNQKAKLDGHNSTIQSVCFSPDGKTLASGSDDDSIRLWDVQIEQEKAKLDGHSCAVQSV 720
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S G L GS+ + ++D + G ++ AG G V+SVC+ D
Sbjct: 721 CFS--PDGTTLASGSDDKSIRLWDFQKG-------YQKAKLAG-HGGSVNSVCFSL---D 767
Query: 341 ECTLVAGGSD 350
TL +G SD
Sbjct: 768 GTTLASGSSD 777
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 26/262 (9%)
Query: 46 GVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKW 105
G I F P + A+G +RI+++++ + + HS + + S+ +
Sbjct: 466 GHICFSPDGTRLASGSSDNSMRIWDVQTGIQKAKLDG---HS----------STIYSVSF 512
Query: 106 KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
P G L SG D + +D+E + + D H ++S+ +S L ASGS D
Sbjct: 513 SP--DGTTLASGSSDNSIRLWDVELEQQKAKLDGHNST-IYSLCFSPNGTTL-ASGSSDN 568
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++WD + G + + V +++ +VC F P +L A+G ADK +DV K +
Sbjct: 569 TLRLWDVKS-GQQNIELVSHTSTVYSVC---FSPDDITL-ASGSADKSIRLWDV-KTGNQ 622
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
DGH TV I F D TL + D ++LW+V GH N +
Sbjct: 623 KAKLDGHNSTVYSINFSPDGATLASGSYDKSIRLWDVKTGNQKAKLDGH--NSTIQSVCF 680
Query: 285 WRHGGLLGCGSETNQVFVYDVR 306
G L GS+ + + ++DV+
Sbjct: 681 SPDGKTLASGSDDDSIRLWDVQ 702
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S ++ + F P ++ A+G IR++++K+ A +D C IC
Sbjct: 133 SSTVQSVCFSPDGTILASGSSDNSIRLWDVKT----GQQKAKLDGHSSCVNSIC------ 182
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ P G L SG +D + +D++ + + H +V+SVD+S L ASG
Sbjct: 183 ---FSP--DGTTLASGSFDNSIRLWDVKTGQQKAKLNGHSD-QVYSVDFSPDGTTL-ASG 235
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++++WD + K + + V V+F P G++L A+ +D +D+ K
Sbjct: 236 SYDNSIRLWDVKTGQQK----AKLNGHSDQVYSVDFSPDGTTL-ASSSSDNSIRLWDI-K 289
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ DGH V + F D TL ++ D ++LWNV + +GH +
Sbjct: 290 TIQQKAKLDGHSDYVRSVCFSPDGTTLASSSADKSIRLWNVMTGQAQAKLEGHSGTVYSI 349
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVR 306
S+ G +L S + ++DV
Sbjct: 350 CYSL--DGAILASSSADKSIRLWDVN 373
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 131/314 (41%), Gaps = 36/314 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F P + A+G + IR++++K+ + + H+ +P
Sbjct: 636 INFSPDGATLASGSYDKSIRLWDVKT---GNQKAKLDGHNSTIQSVCFSP---------- 682
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG D + +D++ + + D H V SV +S L ASGSDD ++
Sbjct: 683 --DGKTLASGSDDDSIRLWDVQIEQEKAKLDGHSCA-VQSVCFSPDGTTL-ASGSDDKSI 738
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD + G + S ++VC F G++L A+G +D ++V+
Sbjct: 739 RLWDFQ-KGYQKAKLAGHGGSVNSVC---FSLDGTTL-ASGSSDYSIRLWEVKSGQQKA- 792
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+GH V + F +TL + D ++LW++ + GHV + V S
Sbjct: 793 KLEGHSSVVWQVSFSSDETLASVSYDKSIRLWDIKTEQQKTKLDGHVCSVYSVCFS--PD 850
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G +L GS + ++DV+ G D G S+V D TLV+G
Sbjct: 851 GIMLASGSADKSIRLWDVKTGNKKAKLD-----------GHNSTVYSINFSPDGATLVSG 899
Query: 348 GSDGLLHVFVGKKK 361
D + ++ KKK
Sbjct: 900 SYDKSIRLWDVKKK 913
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG D + ++++ + + H VW V +S + + AS S D ++++W
Sbjct: 768 GTTLASGSSDYSIRLWEVKSGQQKAKLEGHSSV-VWQVSFSSDETL--ASVSYDKSIRLW 824
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + + K + +V V F P G ++A+G ADK +DV K + D
Sbjct: 825 DIKTEQQK----TKLDGHVCSVYSVCFSPDGI-MLASGSADKSIRLWDV-KTGNKKAKLD 878
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GH TV I F D TLV+ D ++LW+V + I GH
Sbjct: 879 GHNSTVYSINFSPDGATLVSGSYDKSIRLWDVKKKQQIANINGH 922
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 33/268 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + ++F P + A+ IR+++IK++ + HS DY +
Sbjct: 259 SDQVYSVDFSPDGTTLASSSSDNSIRLWDIKTI---QQKAKLDGHS---DY-------VR 305
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G L S D + +++ + + H G V+S+ YS +L AS
Sbjct: 306 SVCFSP--DGTTLASSSADKSIRLWNVMTGQAQAKLEGHSGT-VYSICYSLDGAIL-ASS 361
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++++WD + + + ++ C F P GS ++A+G +D +DV K
Sbjct: 362 SADKSIRLWD--VNKRELQAEIESHNRTHYSLC--FSPDGS-ILASG-SDNSVNIWDV-K 414
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
DGH T+ + F + TL + D ++LW+V + + GH+
Sbjct: 415 TGQYKTELDGHNSTIYSVCFSFEGRTLASGSNDNSIRLWDVKTGLQVAKFDGHI------ 468
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWG 308
G L GS N + ++DV+ G
Sbjct: 469 --CFSPDGTRLASGSSDNSMRIWDVQTG 494
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 27/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + ++F P + A+G IR++++K+ + HS ++
Sbjct: 217 SDQVYSVDFSPDGTTLASGSYDNSIRLWDVKT---GQQKAKLNGHSD----------QVY 263
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G L S D + +D++ + D H V SV +S L AS
Sbjct: 264 SVDFSP--DGTTLASSSSDNSIRLWDIKTIQQKAKLDGHSD-YVRSVCFSPDGTTL-ASS 319
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQ-PSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W+ G+ + ++ S + ++C + +++A+ ADK +DV
Sbjct: 320 SADKSIRLWNVMT--GQAQAKLEGHSGTVYSIC----YSLDGAILASSSADKSIRLWDVN 373
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
K + + H +T + F +++ +G+D + +W+V + GH N
Sbjct: 374 KR-ELQAEIESHNRTHYSLCFSPDGSILASGSDNSVNIWDVKTGQYKTELDGH--NSTIY 430
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ G L GS N + ++DV+ G V
Sbjct: 431 SVCFSFEGRTLASGSNDNSIRLWDVKTGLQV 461
>gi|172054889|ref|YP_001806216.1| WD repeat-containing protein [Cyanothece sp. ATCC 51142]
gi|354555360|ref|ZP_08974662.1| (Myosin heavy-chain) kinase [Cyanothece sp. ATCC 51472]
gi|171701170|gb|ACB54150.1| WD-repeat protein [Cyanothece sp. ATCC 51142]
gi|353552951|gb|EHC22345.1| (Myosin heavy-chain) kinase [Cyanothece sp. ATCC 51472]
Length = 1189
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 77/327 (23%), Positives = 135/327 (41%), Gaps = 46/327 (14%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I + F P + ATG + I+++ IK+ C + T ++
Sbjct: 823 IRTVAFSPDGQIVATGDNDQTIKLWKIKT--------------GEC---LQTWQGYTNWM 865
Query: 105 WKPGTS--GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W S GR + SG D ++ +D++ + H +WSV+ S ++ +SG
Sbjct: 866 WSVAFSSDGRTVVSGGVDKILRLWDIQTGRCLKSLSGHEAW-IWSVNISADGRIVASSG- 923
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSAS--RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
DD T+++WD + G+C+ T++ S + V F +A+G D +DV+
Sbjct: 924 DDETIRLWDIKT--GQCIRTLRHSVDHYQGGTWAVAF-SLNGQYIASGSQDSLVKLWDVQ 980
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ + +FD H+ + + F D L + D +KLW++ + I T GH N
Sbjct: 981 TG-ELITIFDEHKNWIWSVAFSPDSKILASGSDDQTIKLWDIKTKKCINTLTGHTNKVRS 1039
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP---VTAAGSER 326
+ + L GSE + V ++D+ G+ +W DF A+ SE
Sbjct: 1040 IAFG--NNSQFLVSGSEDHTVKLWDITTGDCLKTFEGHQGWIWSVDFSANGKYIASASED 1097
Query: 327 GFVSSVCWRRVGEDECTLVAGGSDGLL 353
++V V EC G GL+
Sbjct: 1098 ---TTVKLWNVATRECLYTFRGHKGLV 1121
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 36/268 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKW-- 105
+ F P A G KIRI+ VVD ++ L + +W
Sbjct: 574 LAFSPDGQRLAAGDSQGKIRIFR------------VVDGQQIL--------TLGTHRWWT 613
Query: 106 ---KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
G+ L S D V +DL+ + H + VWSV YS ++ AS S
Sbjct: 614 VSVSFSPDGQKLVSSSLDPTVKLWDLQTGQCLHNLQGHS-KYVWSVIYSPDGRII-ASAS 671
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD T+++WD + G+C+ T+ + V V F L++ G D +D+
Sbjct: 672 DDETIKLWDS--NTGQCLKTL--TGHTDWVVGVAFSRDSQHLIS-GSYDNDIKLWDI-AT 725
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ F GH+ V + F D T+ ++ D +K+WNV+ ++T +GH +
Sbjct: 726 GKCLKTFQGHQDAVWIVNFSSDGQTIFSSSCDKTVKIWNVSTGECLKTLRGHA--KEIKA 783
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+SV G + G V ++D + G+
Sbjct: 784 MSVSPDGNTIVSGCFEPTVKLWDAKTGK 811
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 112/274 (40%), Gaps = 69/274 (25%)
Query: 56 VFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLG 115
+ A+ G IR+++IK+ + VDH Y T A SL +G+ +
Sbjct: 918 IVASSGDDETIRLWDIKTGQCIRTLRHSVDH-----YQGGTWAVAFSL------NGQYIA 966
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SG D +V +D++ I DEH +WSV +S +L ASGSDD T+++WD +
Sbjct: 967 SGSQDSLVKLWDVQTGELITIFDEHKNW-IWSVAFSPDSKIL-ASGSDDQTIKLWDIKTK 1024
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFG--SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
KC++T+ ++ V FG S + +G D +D+ D + F+GH+
Sbjct: 1025 --KCINTLTGHTNK-----VRSIAFGNNSQFLVSGSEDHTVKLWDI-TTGDCLKTFEGHQ 1076
Query: 234 KTVTYIRF-------------------------------------------LDVDTLVTA 250
+ + F D ++T
Sbjct: 1077 GWIWSVDFSANGKYIASASEDTTVKLWNVATRECLYTFRGHKGLVRSTAFSADSKVVLTG 1136
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
TDG LKLW+V ++T + +R + G+++
Sbjct: 1137 STDGTLKLWDVVTGECLKTMQA---SRPYEGMNI 1167
Score = 43.9 bits (102), Expect = 0.14, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 9/151 (5%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SG + T+++WD + GKC++T+ + + V F P G +VA G D+ + +
Sbjct: 795 SGCFEPTVKLWDAKT--GKCLNTLL--GHLTGIRTVAFSPDGQ-IVATGDNDQTIKLWKI 849
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
K + + + G+ + + F D T+V+ G D L+LW++ R +++ GH
Sbjct: 850 -KTGECLQTWQGYTNWMWSVAFSSDGRTVVSGGVDKILRLWDIQTGRCLKSLSGHEAWIW 908
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V +S G ++ + + ++D++ G+
Sbjct: 909 SVNISA--DGRIVASSGDDETIRLWDIKTGQ 937
>gi|327288676|ref|XP_003229052.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Anolis
carolinensis]
Length = 667
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 22/245 (8%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+SGR+L +G D V + + K I H V SV + + ++ A GS G+++
Sbjct: 32 SSGRLLATGGEDCRVNIWSVNKPNCIMSLTGHTTP-VESVKINTNEELIVA-GSQSGSIR 89
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K + T+ ++ +C ++FHPFG VA+G D +DVR+ V
Sbjct: 90 IWD--LEAAKILRTLM--GHKANICSLDFHPFGG-FVASGSMDTNIKLWDVRRK-GCVFR 143
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V +RF D L ++ D +KLW++ +++ + GH N V +
Sbjct: 144 YKGHSQAVRCLRFSPDGKWLASSSDDHTVKLWDLAAGKIMFEFAGHTGPVNMVEFHPNEY 203
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS + +D + F+ V+ E V + D C L AG
Sbjct: 204 --LLASGSSDRMIRFWD--------LEKFQVVSCIEEEATPARCVLF---NPDGCCLFAG 250
Query: 348 GSDGL 352
D L
Sbjct: 251 CQDAL 255
>gi|414075999|ref|YP_006995317.1| WD-40 repeat-containing protein [Anabaena sp. 90]
gi|413969415|gb|AFW93504.1| WD-40 repeat-containing protein [Anabaena sp. 90]
Length = 1446
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L +GD D V ++ + H V+SV +S GD + ASGS D T+++W
Sbjct: 842 GKYLATGDSDDRVQIWNALTGRELLTLVGHSSG-VYSVAWS-GDGLTLASGSRDNTVKLW 899
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G CV T++ ++ V V + G +L A+G D +D++ D V +
Sbjct: 900 DMQT--GDCVRTLEGHSN--WVNSVAWSRDGQTL-ASGSGDNTVKLWDMQTG-DCVRTLE 953
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + + D TL + D +KLW+V +RT +GH N N V S R G
Sbjct: 954 GHSNWVLSVAWSRDGQTLASGSLDNTVKLWDVQSGDCVRTLEGHSNWVNSVAWS--RDGL 1011
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
+L GS N V ++DV+ G+ V
Sbjct: 1012 ILASGSNNNTVKLWDVQSGDCV 1033
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 137/309 (44%), Gaps = 39/309 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P ATG +++I+N L ++ +V HS + + S+
Sbjct: 832 SVYSVAFSPDGKYLATGDSDDRVQIWN---ALTGRELLTLVGHS----------SGVYSV 878
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
W G L SG D V +D++ + + H V SV +S+ L ASGS
Sbjct: 879 AWSG--DGLTLASGSRDNTVKLWDMQTGDCVRTLEGH-SNWVNSVAWSRDGQTL-ASGSG 934
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++WD + G CV T++ + + V V + G +L A+G D +DV+
Sbjct: 935 DNTVKLWDMQT--GDCVRTLEGHS--NWVLSVAWSRDGQTL-ASGSLDNTVKLWDVQSG- 988
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
D V +GH V + + D L + + +KLW+V +RT +GH + V
Sbjct: 989 DCVRTLEGHSNWVNSVAWSRDGLILASGSNNNTVKLWDVQSGDCVRTLQGH---SHLVLS 1045
Query: 283 SVWRHGGL-LGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
W GL L GS+ V ++DV+ G+ V T G +V S+ W G+
Sbjct: 1046 LAWSGDGLTLASGSKDKTVKLWDVQSGDCV-------RTLEGHSH-WVMSLAWSGDGQ-- 1095
Query: 342 CTLVAGGSD 350
TL +G +D
Sbjct: 1096 -TLASGSND 1103
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 111/251 (44%), Gaps = 25/251 (9%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL W G L SG D V +D++ + + H V S+ +S GD ASG
Sbjct: 1045 SLAWSG--DGLTLASGSKDKTVKLWDVQSGDCVRTLEGHS-HWVMSLAWS-GDGQTLASG 1100
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D T+++WD + G CV T+Q + V + + G +L + D ++V+
Sbjct: 1101 SNDKTVKLWDVQS--GDCVRTLQGHSH--LVLSLAWSGDGQTLASGSLDDNTMKLWNVQT 1156
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
D V +GH V + + D TL + D +KLWNV+ +RT +GH + N V
Sbjct: 1157 G-DCVRTLEGHSHFVRSVAWSGDGLTLASGSDDKTVKLWNVHTGDCVRTLEGHSDWVNSV 1215
Query: 281 GLSVWRHGGL-LGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
W GL L GS+ V +++ VH + V +V+SV W
Sbjct: 1216 A---WSGDGLTLASGSKDKTVKLWN--------VHTGDCVRTLEGHSDWVNSVAW---SG 1261
Query: 340 DECTLVAGGSD 350
D TL +G D
Sbjct: 1262 DGLTLASGSKD 1272
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
GD + ASGS D T+++WD + G C T++ + V V + G +L A+G +
Sbjct: 1261 GDGLTLASGSKDKTVKLWDMQT--GDCGRTLEGHSD--WVRSVAWSGDGLTL-ASGSNNN 1315
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+DV+ D +GH V + + D TL + D +KLWNV +RT +
Sbjct: 1316 TVKLWDVQSG-DCGRTLEGHSDWVNSVAWSGDGLTLASGSNDNTVKLWNVQSGDCVRTLE 1374
Query: 272 GHVNNRNFVGLSVWRHGGL-LGCGSETNQVFVYDVRWGEPVWVHD 315
GH +FV W GL L GS V +++V+ G+ + D
Sbjct: 1375 GH---SHFVRSVAWSGDGLTLASGSYDETVKLWNVQTGDCIATFD 1416
>gi|186681873|ref|YP_001865069.1| hypothetical protein Npun_F1419 [Nostoc punctiforme PCC 73102]
gi|186464325|gb|ACC80126.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
Length = 1833
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 26/265 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + + + P+ A+ + I+I+++ S P+ ++ HS V +
Sbjct: 1382 SNVVFSVAYSPNGQHLASASADKTIKIWDVSS---GKPLKSLAGHSNV----------VF 1428
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P +G+ L S D + +D+ P+ +H R V SV YS L AS
Sbjct: 1429 SVAYSP--NGQQLASASDDKTIKVWDISNGKPLESMTDHSDR-VNSVVYSPNGQHL-ASP 1484
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ GK + T+ + S V V + P G L +A DK +DV
Sbjct: 1485 SYDKTIKIWN--VSSGKLLKTL--TGHSSEVNSVAYSPNGQQLASASW-DKTIKVWDVNS 1539
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
P+ GH V + + + L +A D +K+W+V+ ++++T GH N + V
Sbjct: 1540 G-KPLKTLIGHSSVVNSVAYSPNGQQLASASFDNTIKVWDVSSGKLLKTLTGHSNAVSSV 1598
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV 305
S +G L S N + ++DV
Sbjct: 1599 AYS--PNGQQLASASLDNTIKIWDV 1621
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 30/302 (9%)
Query: 9 QPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRI 68
Q A ++++ WD + + S + SD + + + P+ A+ + I+I
Sbjct: 1437 QQLASASDDKTIKVWDISNGKPLESMTDH----SDRVNSVVYSPNGQHLASPSYDKTIKI 1492
Query: 69 YNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDL 128
+N+ S K+ ++++S+ + P +G+ L S +D + +D+
Sbjct: 1493 WNVSS-------------GKLLKTLTGHSSEVNSVAYSP--NGQQLASASWDKTIKVWDV 1537
Query: 129 EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
P+ H V SV YS L AS S D T+++WD GK + T+ +
Sbjct: 1538 NSGKPLKTLIGHSSV-VNSVAYSPNGQQL-ASASFDNTIKVWD--VSSGKLLKTL--TGH 1591
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTL 247
+AV V + P G L +A D +DV + GH V+ + + + L
Sbjct: 1592 SNAVSSVAYSPNGQQLASASL-DNTIKIWDVSS-AKLLKTLTGHSDAVSSVAYSPNGQQL 1649
Query: 248 VTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
+A D +K+W+V+ +++++ GH N + S +G L S N + ++DV
Sbjct: 1650 ASASDDNTIKIWDVSSGKLLKSLSGHSNAVYSIAYS--PNGQQLASASADNTIKIWDVSS 1707
Query: 308 GE 309
G+
Sbjct: 1708 GK 1709
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 126/274 (45%), Gaps = 30/274 (10%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPA 98
A S+ + + + P+ A+ + I++++I + P+ ++ DHS
Sbjct: 1421 AGHSNVVFSVAYSPNGQQLASASDDKTIKVWDISN---GKPLESMTDHSD---------- 1467
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++S+ + P +G+ L S YD + +++ + H V SV YS L
Sbjct: 1468 RVNSVVYSP--NGQHLASPSYDKTIKIWNVSSGKLLKTLTGHSSE-VNSVAYSPNGQQL- 1523
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS S D T+++WD + GK + T+ S V V + P G L +A D +D
Sbjct: 1524 ASASWDKTIKVWD--VNSGKPLKTL--IGHSSVVNSVAYSPNGQQLASAS-FDNTIKVWD 1578
Query: 219 VR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
V K++ GH V+ + + + L +A D +K+W+V+ +++++T GH +
Sbjct: 1579 VSSGKLLK---TLTGHSNAVSSVAYSPNGQQLASASLDNTIKIWDVSSAKLLKTLTGHSD 1635
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ V S +G L S+ N + ++DV G+
Sbjct: 1636 AVSSVAYS--PNGQQLASASDDNTIKIWDVSSGK 1667
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 72/313 (23%), Positives = 138/313 (44%), Gaps = 38/313 (12%)
Query: 4 FHDHQQPQAETTNERARCEWDFN----LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFAT 59
++ + Q A +++ WD + L+T SS N+ + ++P+ A+
Sbjct: 1264 YNPNGQQLASASDDNTIKIWDISSGKLLKTLPGHSSVVNS--------VAYNPNGQQLAS 1315
Query: 60 GGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDY 119
+ I+I++I S + + ++ HS ++++S+ + P +G+ L S +
Sbjct: 1316 ASNDKTIKIWDINSGKL---LKSLTGHS----------SEVNSVAYSP--NGQQLASASF 1360
Query: 120 DGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKC 179
D + +D+ + H V+SV YS L AS S D T+++WD GK
Sbjct: 1361 DNTIKIWDISSGKLLKTLTGHSNV-VFSVAYSPNGQHL-ASASADKTIKIWD--VSSGKP 1416
Query: 180 VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI 239
+ ++ + + V V + P G L +A DK +D+ P+ H V +
Sbjct: 1417 LKSL--AGHSNVVFSVAYSPNGQQLASAS-DDKTIKVWDISNG-KPLESMTDHSDRVNSV 1472
Query: 240 RFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETN 298
+ + L + D +K+WNV+ ++++T GH + N V S +G L S
Sbjct: 1473 VYSPNGQHLASPSYDKTIKIWNVSSGKLLKTLTGHSSEVNSVAYS--PNGQQLASASWDK 1530
Query: 299 QVFVYDVRWGEPV 311
+ V+DV G+P+
Sbjct: 1531 TIKVWDVNSGKPL 1543
Score = 57.8 bits (138), Expect = 9e-06, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + + P+ A+ + I+++++ S P+ ++ HS V ++
Sbjct: 1508 SSEVNSVAYSPNGQQLASASWDKTIKVWDVNS---GKPLKTLIGHSSV----------VN 1554
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P +G+ L S +D + +D+ + H V SV YS L AS
Sbjct: 1555 SVAYSP--NGQQLASASFDNTIKVWDVSSGKLLKTLTGHSNA-VSSVAYSPNGQQL-ASA 1610
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR- 220
S D T+++WD K + T+ + AV V + P G L +A D +DV
Sbjct: 1611 SLDNTIKIWD--VSSAKLLKTL--TGHSDAVSSVAYSPNGQQLASAS-DDNTIKIWDVSS 1665
Query: 221 -KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
K++ + GH V I + + L +A D +K+W+V+ +++++ GH
Sbjct: 1666 GKLLKSL---SGHSNAVYSIAYSPNGQQLASASADNTIKIWDVSSGKLLKSLSGH 1717
Score = 57.8 bits (138), Expect = 9e-06, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+SS+ + P +G L S D + +D+ + H R + S+ YS L
Sbjct: 1175 VSSVAYSP--NGYQLASASADKTIKIWDVSSGQLLKTLTGHSDR-IRSIAYSPNGQQL-V 1230
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD GK + T+ + SAV V ++P G L +A D +D+
Sbjct: 1231 SASADKTIKIWD--VSSGKLLKTL--TGHTSAVSSVAYNPNGQQLASAS-DDNTIKIWDI 1285
Query: 220 R--KMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
K++ GH V + + + L +A D +K+W++N +++++ GH +
Sbjct: 1286 SSGKLLK---TLPGHSSVVNSVAYNPNGQQLASASNDKTIKIWDINSGKLLKSLTGHSSE 1342
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
N V S +G L S N + ++D+ G+
Sbjct: 1343 VNSVAYS--PNGQQLASASFDNTIKIWDISSGK 1373
>gi|218438221|ref|YP_002376550.1| hypothetical protein PCC7424_1234 [Cyanothece sp. PCC 7424]
gi|218170949|gb|ACK69682.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
Length = 1188
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VW+V++S +L ASG D T+++WD + +CV T++ + V V F G L
Sbjct: 952 VWAVEFSPNGSLL-ASGGTDQTVKLWDVKT--AQCVKTLE--GHQGWVWSVAFSADGK-L 1005
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVND 263
+ +GC D+ +D++ + GH VT + F D + + TD + LW+VN+
Sbjct: 1006 LGSGCFDRTVKLWDLQSS-QCLYTLKGHLAEVTTVAFSRDSQFIASGSTDYSIILWDVNN 1064
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
+ +T +GH + V S G L GS + ++D GE + + G
Sbjct: 1065 GQPFKTLQGHTSIVMSVTFS--PDGRFLASGSFDQTIRIWDFLTGECLLI-------LQG 1115
Query: 324 SERGFVSSVCWRRVGEDECTLVAGGSD 350
RG + SV + R D C LV+GG D
Sbjct: 1116 HTRG-IESVGFSR---DGCFLVSGGED 1138
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 24/231 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++ + +EF P+ S+ A+GG + ++++++K+ V ++ + + + A
Sbjct: 949 AEGVWAVEFSPNGSLLASGGTDQTVKLWDVKTA----QCVKTLEGHQGWVWSVAFSA--- 1001
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G++LGSG +D V +DL+ ++ H V +V +S+ D ASG
Sbjct: 1002 --------DGKLLGSGCFDRTVKLWDLQSSQCLYTLKGHLAE-VTTVAFSR-DSQFIASG 1051
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++ +WD + G+ T+Q S V V F P G L A+G D+ +D
Sbjct: 1052 STDYSIILWD--VNNGQPFKTLQ--GHTSIVMSVTFSPDGRFL-ASGSFDQTIRIWDFLT 1106
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+ +L+ GH + + + F D LV+ G D +KLW V ++T+K
Sbjct: 1107 G-ECLLILQGHTRGIESVGFSRDGCFLVSGGEDETIKLWQVQTGECLKTFK 1156
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 33/273 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+GG ++RI+++++ + + H L S+ + P
Sbjct: 736 VAFSPDGQLLASGGDDPRVRIWDVQT---GECIKTLSGHL----------TSLRSVVFSP 782
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD------PVLGASG 161
G+ L SG D V +D++ + H VWSV ++ P L ASG
Sbjct: 783 --DGQRLASGSADQTVRIWDVQTGQCLKILSGH-TNWVWSVAFAPSKTVNSLTPQLLASG 839
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D T+++W+ + G+C+ T+ A++ V V F L+ G D ++
Sbjct: 840 SEDRTIRLWN--INNGECLKTLIAYANK--VFSVAFQGENPHLIVGGYEDNLVRVWNWSN 895
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTA---GTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ L F GH V + L+ + G+D +KLWNV + + T GH
Sbjct: 896 --NECLNFKGHTDVVLSVACSPKGELIASSGGGSDCTIKLWNVTSGQCLSTLSGHAEGVW 953
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V S +G LL G V ++DV+ + V
Sbjct: 954 AVEFS--PNGSLLASGGTDQTVKLWDVKTAQCV 984
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/252 (23%), Positives = 121/252 (48%), Gaps = 25/252 (9%)
Query: 69 YNIKSVLVDHPVVAVVD-------HSKVCD-YYICTPAKLSSLKWKPGTSGRVLGSGDYD 120
YN+ ++ + H ++ HS + + + T + S+ + P G+++ +G+
Sbjct: 526 YNLSNLTIRHGYFQGINLHQVNLAHSNLIECRFTQTFGAIYSVAFSP--DGQLMATGNRH 583
Query: 121 GVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCV 180
G + + +E P+F H VWS+ +S+ +L SGS D T+++W+ G+C+
Sbjct: 584 GEIWLWQIEDSQPLFTCKGHTNW-VWSIVFSRNGEIL-ISGSTDQTIRLWN--VSNGQCL 639
Query: 181 STVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR---KMVDPVLVFDGHRKTVT 237
+ S + V + P G+ L + G D++ + ++++ L + +++
Sbjct: 640 KIL--SQHTNGVYAIALSPDGNILASGG--DEQVIKFSTLSEGQLLNLSLHHNCGIRSIA 695
Query: 238 YIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSET 297
Y D L + GTD +++W+++ + ++T GH+N V S G LL G +
Sbjct: 696 YSP--DGRFLASGGTDQTVRIWDLSKGQCLKTLSGHLNWVWSVAFS--PDGQLLASGGDD 751
Query: 298 NQVFVYDVRWGE 309
+V ++DV+ GE
Sbjct: 752 PRVRIWDVQTGE 763
>gi|443311302|ref|ZP_21040932.1| WD40 repeat-containing protein [Synechocystis sp. PCC 7509]
gi|442778625|gb|ELR88888.1| WD40 repeat-containing protein [Synechocystis sp. PCC 7509]
Length = 1175
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 22/221 (9%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
A + S+ + P + ++L SG YD + ++ K+ I H GR V+SVD+S D L
Sbjct: 947 APVYSVSFHP--NNQILASGSYDRTIKLWNTNGKL-IRTLTGHLGR-VYSVDFSS-DGQL 1001
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+++W GK + T+ + R V V+F P S L+A D +
Sbjct: 1002 LASGSSDRTIKLWS---TNGKLIRTL--TGHRGRVYSVDFSP-NSQLLATVSQDGTIKIW 1055
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+ R + + GHR + +RF D +T+ + G D +KLW+ ++++T+ GH
Sbjct: 1056 NTRNGKE-ISNLVGHRGAIYGVRFSPDGETIASGGDDRMVKLWDYRQGKLLKTFSGHRAE 1114
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
N V S +G +L N V +++ W +FE
Sbjct: 1115 VNSVSFS--PNGQILASVGRDNIVILWN-------WDVEFE 1146
Score = 41.2 bits (95), Expect = 0.78, Method: Composition-based stats.
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 15/194 (7%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+++ S DG V + L+ + G V+S +S + + +G D GT+++W
Sbjct: 753 QLIASASNDGTVKLWKLDGTLVKVLTGHKGA--VYSSAFSPDNQTIATTGKD-GTVKVWR 809
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
K + ++ ++ + F P G ++A+ +D + + + LV G
Sbjct: 810 M-----KDYTQIKNFQAQGRIYSAGFSPNGE-IIASASSDNIVRLWKLNNFLRQDLV--G 861
Query: 232 HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
HR V I F + L++A DG +KLW N + V K ++ F +S +G L
Sbjct: 862 HRAEVNSIDFSPNSQNLISASQDGTIKLWRSNGTFVKTIAK---DSNWFTSVSFSPNGQL 918
Query: 291 LGCGSETNQVFVYD 304
+ + V ++D
Sbjct: 919 IAASNRNKAVKLWD 932
Score = 40.4 bits (93), Expect = 1.4, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I I F P V A+ I+++ + ++ H + D S+
Sbjct: 618 INSISFSPDSQVIASASDDNTIKLWRNDGIKTK----TLIGHKQPVD----------SIS 663
Query: 105 WKPGTSGRVLGSGDYDGVVMEY-----DLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ P G+ + SG +D V + +++ +P+ R ++SV S ++ +
Sbjct: 664 FSP--DGKFIVSGSWDNTVKLWRSNGEEIKTTIPLKHRGA-----IYSVSVSADSEIIAS 716
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+G G +++W GK +T Q A + V V F L+A+ D + +
Sbjct: 717 AGQA-GDIKLWTL---DGKNRTTWQ--AHKDQVNYVSFSK-NRQLIASASNDGTVKLWKL 769
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ V V GH+ V F D T+ T G DG +K+W + D I+ ++
Sbjct: 770 DGTL--VKVLTGHKGAVYSSAFSPDNQTIATTGKDGTVKVWRMKDYTQIKNFQAQ 822
>gi|356571748|ref|XP_003554035.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
isoform 1 [Glycine max]
gi|356571750|ref|XP_003554036.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
isoform 2 [Glycine max]
gi|356571752|ref|XP_003554037.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
isoform 3 [Glycine max]
Length = 345
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 42/309 (13%)
Query: 7 HQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVS---DSIGVIEFDPSDSVFATGGIA 63
+ PQA N + R SS SP +S +I ++F+P+ SV A+G
Sbjct: 27 YNAPQAPGPNGKQR----------TSSLESPIMLLSGHQSAIYTMKFNPAGSVVASGSHD 76
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
R+I ++N+ H ++ + K + L T G + S D V
Sbjct: 77 REIFLWNV--------------HGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTV 122
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
+D+E I + EH V S S+ P L SGSDDGT ++WD R G ++
Sbjct: 123 RAWDVETGKQIKKMVEHLSY-VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG-----SI 176
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-L 242
Q + + V F S + G D +D+RK + + GH+ +T ++
Sbjct: 177 QTFPDKYQITAVGFSD-ASDKIFTGGIDNDVKIWDLRKG-EVTMTLQGHQDMITAMQLSP 234
Query: 243 DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSE 296
D L+T G D L +W++ +R ++ +GH +N +N + G + GS
Sbjct: 235 DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSS 294
Query: 297 TNQVFVYDV 305
V+++D
Sbjct: 295 DRMVYIWDT 303
>gi|417412118|gb|JAA52472.1| Putative microtubule severing protein katanin p80 subunit b,
partial [Desmodus rotundus]
Length = 648
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 25 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNAPEELIVA-GSQSGSIRV 82
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 83 WD--LEAAKILRTL--VGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 136
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH + V +
Sbjct: 137 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVSVVEFHPNEY- 195
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V S+ + D C L +G
Sbjct: 196 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSILF---NPDGCCLYSGC 243
Query: 349 SDGL 352
D L
Sbjct: 244 QDSL 247
>gi|393232291|gb|EJD39874.1| WD40 repeat-like protein [Auricularia delicata TFB-10046 SS5]
Length = 443
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 19/238 (7%)
Query: 120 DGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKC 179
D V+ +D E PI + G RV YS +L ASG DD T ++W+ G+
Sbjct: 220 DCVIRRWDAESGAPIGKPMTGHGERVRCAAYSPSG-MLIASGGDDNTFRLWNSST--GEA 276
Query: 180 VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI 239
+ V P + CV F P G+S +A G D + + +GH K+V +
Sbjct: 277 IG-VPPEGHTNWAWCVAFSPDGAS-IATGSWDNTIRLWSTADRAH-LATLEGHEKSVLSL 333
Query: 240 RFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETN 298
F D L+++ TDG +++WN++ ++ RT GH ++ V +S G + GS T
Sbjct: 334 CFAPDRIRLISSSTDGSVRIWNLSTQQLERTIWGHSDSIWSVAVS--PSGRYIASGSVTQ 391
Query: 299 QVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
V ++D GE V G G + +V + D ++ +GG D + ++
Sbjct: 392 TVRIWDAWTGEAV----------GGPLTGHMGNVTFVAFSPDGRSVASGGWDKTVRIW 439
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 9/202 (4%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR S DG + +D E P+ + V + YS D SGS+D T+++W
Sbjct: 11 GRGFCSASVDGTIRRWDAESGAPVGKPMTSHSDEVNGIAYSP-DGTRIVSGSNDRTVRVW 69
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+ + V S V CV F P G+ +A+G D+ +D +
Sbjct: 70 DAST--GEALG-VPLEGHTSLVLCVAFSPDGA-CIASGSGDRTIRLWDSGTGAQ-LSTLT 124
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH +V + F D LV+ D +++WNV ++ RT +GH N V +S G
Sbjct: 125 GHTSSVRSLSFSPDCIHLVSGSYDNTVRIWNVETRKLERTLRGHSNWTRSVAIS--PSGR 182
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
+ GS + ++D + GE V
Sbjct: 183 YIVSGSFDKTIRIWDAQTGEAV 204
>gi|357125342|ref|XP_003564353.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Brachypodium distachyon]
Length = 828
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 23/261 (8%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ A + SL TS RV +G D V + + K+ P+ H V +V++
Sbjct: 13 FVAHDADVRSLAIGKKTS-RVFITGGNDRKVNLWAIGKQTPLLSLSGHTSS-VEAVEFDT 70
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ VL +GS +G++++WD + K V ++ + RS+ VEFHPFG A+G +D
Sbjct: 71 AE-VLVLAGSSNGSIKLWD--LEEAKVVRSL--TGHRSSCTAVEFHPFGE-FFASGSSDT 124
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D++K + + GH + IRF D +VT G D +K+W++ +++ +K
Sbjct: 125 DLKIWDIKKK-GCLHTYKGHSGAIKTIRFTPDGRWIVTGGEDNIVKVWDLTAGKLLHDFK 183
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
H + LL GS V +D + FE + +AG E V S
Sbjct: 184 FHSGEIRCIDFHPQEF--LLATGSADRTVKFWD--------LETFELIGSAGPESTGVRS 233
Query: 332 VCWRRVGEDECTLVAGGSDGL 352
+ G+ TL G + L
Sbjct: 234 TVFHPDGK---TLFCGLDESL 251
>gi|126305201|ref|XP_001376504.1| PREDICTED: katanin p80 WD40-containing subunit B1 [Monodelphis
domestica]
Length = 663
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSVNKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH + V +
Sbjct: 144 KGHTQAVRCLRFSPDGKWLASAADDHSVKLWDLTAGKMMSEFLGHTGPVSVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V S+ + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSILF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>gi|322801278|gb|EFZ21965.1| hypothetical protein SINV_07258 [Solenopsis invicta]
Length = 777
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRVL +G D V + + K+ I H + V + + + ++ A GS G +++
Sbjct: 19 SGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTP-IECVRFGQTEDLVCA-GSQTGALKI 76
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K T+ + +S + C++FHP+G L+A+G D +D+R+ + +
Sbjct: 77 WD--LEHAKLARTL--TGHKSGIRCMDFHPYGE-LLASGSLDTAIKLWDIRRK-GCIFTY 130
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH KTV ++F D + +AG +G +KLW++ R +R + H V H
Sbjct: 131 KGHNKTVNSLKFSPDGQWIASAGEEGMVKLWDLKAGRQLREFSEHRGPATTVEFHP--HE 188
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V +D+
Sbjct: 189 FLLASGSADRTVHFWDL 205
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 90/220 (40%), Gaps = 12/220 (5%)
Query: 84 VDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR 143
++H+K+ + + + + P G +L SG D + +D+ +K IF H +
Sbjct: 79 LEHAKLARTLTGHKSGIRCMDFHP--YGELLASGSLDTAIKLWDIRRKGCIFTYKGHN-K 135
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
V S+ +S D AS ++G +++WD G+ + S R VEFHP
Sbjct: 136 TVNSLKFSP-DGQWIASAGEEGMVKLWD--LKAGRQLREF--SEHRGPATTVEFHPH-EF 189
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND 263
L+A+G AD+ + +D+ H + + F + AG+ LK++
Sbjct: 190 LLASGSADRTVHFWDLESFQLVSSTEQSHSSAIRCLYFSQGGECLFAGSHDVLKVYGWEP 249
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
R + T + ++ L+G T V +Y
Sbjct: 250 GRTLDTIPTGWGKVQDIAVA---QNQLIGASLHTANVLLY 286
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSL 103
I ++F P + A+G + I++++I+ K C + Y ++SL
Sbjct: 95 IRCMDFHPYGELLASGSLDTAIKLWDIRR--------------KGCIFTYKGHNKTVNSL 140
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
K+ P G+ + S +G+V +DL+ + E EH G +V++ + +L ASGS
Sbjct: 141 KFSP--DGQWIASAGEEGMVKLWDLKAGRQLREFSEHRGPAT-TVEFHPHEFLL-ASGSA 196
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+ WD + + VS+ + S S SA+ C+ F G L A K Y ++ + +
Sbjct: 197 DRTVHFWD--LESFQLVSSTEQSHS-SAIRCLYFSQGGECLFAGSHDVLKVYGWEPGRTL 253
Query: 224 DPV 226
D +
Sbjct: 254 DTI 256
>gi|449435105|ref|XP_004135336.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Cucumis sativus]
Length = 344
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 32/290 (11%)
Query: 26 NLRTTVSSSSSPNAAVS---DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
N++ SS SP +S +I ++F+P +V A+G ++I ++N+
Sbjct: 35 NVKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVVASGSHDKEIFLWNV----------- 83
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
H ++ + K + L G + S D + +D+E I + EH
Sbjct: 84 ---HGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSS 140
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+G P++ SGSDDGT ++WD R G +Q + + V F S
Sbjct: 141 FVNSCCPTRRGPPLI-VSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSD-AS 193
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
+ G D +D+RK + ++ GH+ +T ++ D L+T G D L +W++
Sbjct: 194 DKIFTGGIDNDVKVWDLRKG-EVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDM 252
Query: 262 N----DSRVIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+R ++ ++GH +N +N + S G + GS V+++D
Sbjct: 253 RPYAPQNRCVKIFEGHQHNFEKNLLKCSWSADGSKVTAGSSDRMVYIWDT 302
>gi|358248088|ref|NP_001239810.1| uncharacterized protein LOC100789793 [Glycine max]
gi|255645285|gb|ACU23139.1| unknown [Glycine max]
Length = 345
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 42/309 (13%)
Query: 7 HQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVS---DSIGVIEFDPSDSVFATGGIA 63
+ PQA N + R SS SP +S +I ++F+P+ SV A+G
Sbjct: 27 YNAPQAPGPNGKQR----------TSSLESPIMLLSGHQSAIYTMKFNPAGSVIASGSHD 76
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
R+I ++N+ H ++ + K + L T G + S D V
Sbjct: 77 REIFLWNV--------------HGDCKNFMVLKGHKNAVLDLHWTTDGTQIVSASPDKTV 122
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
+D+E I + EH V S S+ P L SGSDDGT ++WD R G ++
Sbjct: 123 RAWDVETGKQIKKMVEHLSY-VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRG-----SI 176
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-L 242
Q + + V F S + G D +D+RK + + GH+ +T ++
Sbjct: 177 QTFPDKYQITAVGFSD-ASDKIFTGGIDNDVKIWDLRKG-EVTMTLQGHQDMITDMQLSP 234
Query: 243 DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSE 296
D L+T G D L +W++ +R ++ +GH +N +N + G + GS
Sbjct: 235 DGSYLLTNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSS 294
Query: 297 TNQVFVYDV 305
V+++D
Sbjct: 295 DRMVYIWDT 303
>gi|332711151|ref|ZP_08431085.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332350133|gb|EGJ29739.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 1239
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 22/180 (12%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
+WSV +S+ L AS S+D T+++WD R +C+ +Q SR V V F P G +L
Sbjct: 1030 IWSVTFSRDGQTL-ASASEDETIRLWDVR--SSECLKVLQGHTSR--VQSVAFSPDGQTL 1084
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
V++ D+ +DVR + V + GH K V + F L+ +G+ D ++LW +
Sbjct: 1085 VSSS-GDQTVRIWDVRTG-ECVRILRGHSKGVWSVAFSPDGELIASGSLDQTIRLWQAST 1142
Query: 264 SRVIRTYKGHVNN-RNFVGLSVWRHGG-------------LLGCGSETNQVFVYDVRWGE 309
+ +RT GH N+ R+ +G S +H L CGS + V++ G+
Sbjct: 1143 GKYLRTLHGHRNSVRSSIGFSPVKHQDHQGRSDQEQVSSYWLTCGSNDGTIKVWNTHTGQ 1202
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G+ L S D +V +D+ + + H G V SV + +L AS S D T+ +
Sbjct: 912 NGQQLASASTDNMVRLWDVSSDNCLKRLEGHTGW-VTSVAFHPNGEIL-ASSSADQTIHL 969
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W G+C+ + V V F P G +L ++G DK +DV +
Sbjct: 970 WS--VSTGQCLKVL--CGHSYWVQSVSFSPLGETLASSG-DDKTIRLWDVNTG-QCFKIL 1023
Query: 230 DGHRK---TVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH +VT+ R D TL +A D ++LW+V S ++ +GH + V S
Sbjct: 1024 RGHTSWIWSVTFSR--DGQTLASASEDETIRLWDVRSSECLKVLQGHTSRVQSVAFS--P 1079
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPV 311
G L S V ++DVR GE V
Sbjct: 1080 DGQTLVSSSGDQTVRIWDVRTGECV 1104
Score = 54.7 bits (130), Expect = 7e-05, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 29/282 (10%)
Query: 32 SSSSSPNAAVSDSIGVI---EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSK 88
+ S + + ++GV+ F P + ATG + ++R++ +++ P++ H+
Sbjct: 594 AHSDLSKSVFTKTLGVVFGVAFSPDGKLLATGDVEGQLRLWQVEN---GKPILICKGHT- 649
Query: 89 VCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSV 148
+ S+ + P G L S D + +++ I + H +WSV
Sbjct: 650 ---------GWVWSVAFSP--DGNTLASCSSDKTIKLWNVSTGQCIKTLEGHTS-SIWSV 697
Query: 149 DYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
+S+ L ASGSD+ T+++WD + G+C Q + V V F G +L A+G
Sbjct: 698 AFSRDGKTL-ASGSDESTVRLWD--VNTGECRQVCQGHTGQ--VLSVAFSADGKTL-ASG 751
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVI 267
D+ +D+ + + GH + + F D L +A D +KLW+ +
Sbjct: 752 SDDQTVRLWDLSTGECRQICY-GHTNRIWSVNFSPDGAMLASASADFTIKLWDPCTGECL 810
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
T H + V S G L GS+ V +++V GE
Sbjct: 811 NTLTNHSDRVRSVMFS--GDGQTLVSGSDDQTVRLWNVSSGE 850
Score = 39.7 bits (91), Expect = 2.0, Method: Composition-based stats.
Identities = 54/208 (25%), Positives = 83/208 (39%), Gaps = 32/208 (15%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L S D + +D+ + H R V SV +S L S S D T+++W
Sbjct: 1039 GQTLASASEDETIRLWDVRSSECLKVLQGHTSR-VQSVAFSPDGQTL-VSSSGDQTVRIW 1096
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R G+CV ++ V V F P G L+A+G D+ + +
Sbjct: 1097 DVRT--GECVRILR--GHSKGVWSVAFSPDGE-LIASGSLDQTIRLWQA-STGKYLRTLH 1150
Query: 231 GHRKTV-TYIRFLDVDT----------------LVTAGTDGCLKLWNVNDSRVIRT---- 269
GHR +V + I F V L DG +K+WN + + I+T
Sbjct: 1151 GHRNSVRSSIGFSPVKHQDHQGRSDQEQVSSYWLTCGSNDGTIKVWNTHTGQCIKTLIPD 1210
Query: 270 --YKGHVNNRNFVGLSVWRHGGLLGCGS 295
Y+G +N GLS+ + L G+
Sbjct: 1211 RPYQG-MNITGVTGLSLAQKSALEALGA 1237
>gi|145545345|ref|XP_001458357.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426176|emb|CAK90960.1| unnamed protein product [Paramecium tetraurelia]
Length = 1166
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 96/356 (26%), Positives = 151/356 (42%), Gaps = 44/356 (12%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A + E+ WD T ++ N +SD I I F P + A+G IR++++
Sbjct: 735 ASGSKEKLIYLWDVK---TGKQWATLNGHISD-ITSICFSPDCTTLASGSRDNCIRLWDV 790
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
K + H H K T SS G L SG D + +D++
Sbjct: 791 K---LGHQKTQFNGHRKGV-----TSVCFSS-------DGTRLVSGSQDNSIRFWDIKSG 835
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
+ D H + + SV +S D L ASGS D T+ +WD + + Q +
Sbjct: 836 RQKSQLDGHK-KEITSVCFSPDDTTL-ASGSSDKTILLWDVKTGQQQ----FQLNGHTRT 889
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
V V F P G+ L+A+G D +DV+K V +GH V + F TL+ +G
Sbjct: 890 VMSVCFSPNGT-LLASGSGDITIILWDVKKGVKKS-SLNGHSHYVASVCFSFDGTLLASG 947
Query: 252 T-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
+ D + LW+V + +KGH + V S G +L GS+ N + ++D++ G+
Sbjct: 948 SGDKTILLWDVKTGQPKSLFKGHTSGVFSVCFS--PDGSMLASGSQDNSIRLWDIKTGQQ 1005
Query: 311 VWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG---LLHVFVGKKKPL 363
D +V+S+C+ G TL +G D L V +GK+K L
Sbjct: 1006 KSQLDVHC--------DYVTSICFSPDGR---TLASGSQDNSIRLWDVKIGKQKSL 1050
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 88/364 (24%), Positives = 140/364 (38%), Gaps = 63/364 (17%)
Query: 18 RARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLV- 76
++ C WD S + V + F P ++ A+G IR++NIK+
Sbjct: 535 KSICLWDVKTGQQKSRLDGHTSCVRS----VCFSPDGTILASGSDDSSIRLWNIKTGFQT 590
Query: 77 -----------------DHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDY 119
D ++A + +C + I T + S + W S +
Sbjct: 591 TKIEDSGNIIFSVCFSPDGIMLAALCSYSICLWEIKTRIEKSRI-WGYKLSSICMSP--- 646
Query: 120 DGVVMEYDLEKKVPIFERDEHGGRR--------VWSVDYSKGDPVLGASGSDDGTMQMWD 171
DG + Y L+ + F + + S+ +S L ASGS D ++ +WD
Sbjct: 647 DGTTLAYGLDNSICFFSMKTRQNKSKLNGHVQDITSLCFSPDGTKL-ASGSKDNSIYLWD 705
Query: 172 PRCDGGKCVSTVQPSAS----RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
V T Q A+ RS + + F P G L A+G +K Y +DV K
Sbjct: 706 --------VKTGQQKATLFGHRSCIESICFSPDGKKL-ASGSKEKLIYLWDV-KTGKQWA 755
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+GH +T I F D TL + D C++LW+V + GH V S
Sbjct: 756 TLNGHISDITSICFSPDCTTLASGSRDNCIRLWDVKLGHQKTQFNGHRKGVTSVCFS--S 813
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVA 346
G L GS+ N + +D++ G D + ++SVC+ D+ TL +
Sbjct: 814 DGTRLVSGSQDNSIRFWDIKSGRQKSQLD--------GHKKEITSVCF---SPDDTTLAS 862
Query: 347 GGSD 350
G SD
Sbjct: 863 GSSD 866
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P D+ A+G + I ++++K+ + H++ + S+ + P
Sbjct: 853 FSPDDTTLASGSSDKTILLWDVKT---GQQQFQLNGHTRT----------VMSVCFSP-- 897
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G +L SG D ++ +D++K V + H V SV +S D L ASGS D T+ +
Sbjct: 898 NGTLLASGSGDITIILWDVKKGVKKSSLNGHS-HYVASVCFSF-DGTLLASGSGDKTILL 955
Query: 170 WDPRCDGGKCVSTVQPSA----SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
WD V T QP + S V V F P G S++A+G D +D+ K
Sbjct: 956 WD--------VKTGQPKSLFKGHTSGVFSVCFSPDG-SMLASGSQDNSIRLWDI-KTGQQ 1005
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
D H VT I F D TL + D ++LW+V + GH + V S
Sbjct: 1006 KSQLDVHCDYVTSICFSPDGRTLASGSQDNSIRLWDVKIGKQKSLLNGHSSWVQSVCFS- 1064
Query: 285 WRHGGLLGCGSETNQVFVYDVR 306
G L GS+ N + +++V+
Sbjct: 1065 -PDGTTLASGSQDNSIRLWNVK 1085
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 20/206 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV +S L ASGSDD ++++WD + K + RS VC F P G++L
Sbjct: 307 VCSVCFSPDGTTL-ASGSDDHSIRLWDVKTGQQKARLDGHSNGVRS-VC---FSPDGTTL 361
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDS 264
A+G D +DV K DGH V + F T + +G++ ++LW+V
Sbjct: 362 -ASGSYDHSIRLWDV-KTGQQKAKLDGHSSYVYSVCFSPDGTTLASGSEVTIRLWDVKTG 419
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGS 324
+ GH+N V S G L GS + ++DV+ G+ + VT G
Sbjct: 420 QQKAKLDGHLNGILSVCFS--PEGSTLASGSNDESICLWDVKTGQ-------QKVTLDG- 469
Query: 325 ERGFVSSVCWRRVGEDECTLVAGGSD 350
G + SVC+ D L +G SD
Sbjct: 470 HIGKILSVCF---SPDGTALASGSSD 492
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 70/274 (25%), Positives = 114/274 (41%), Gaps = 40/274 (14%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKS-----VLVDHPVVAVVDHSKVCDYYICTPAK 99
I I F P A+G + I ++++K+ L H + D + +C CT
Sbjct: 722 IESICFSPDGKKLASGSKEKLIYLWDVKTGKQWATLNGH----ISDITSICFSPDCT--- 774
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR--VWSVDYSKGDPVL 157
L SG D + +D++ ++ + G R V SV +S D
Sbjct: 775 -------------TLASGSRDNCIRLWDVKLG---HQKTQFNGHRKGVTSVCFSS-DGTR 817
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
SGS D +++ WD + K Q + + V F P ++L A+G +DK +
Sbjct: 818 LVSGSQDNSIRFWDIKSGRQKS----QLDGHKKEITSVCFSPDDTTL-ASGSSDKTILLW 872
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNN 276
DV K +GH +TV + F TL+ +G+ D + LW+V + GH +
Sbjct: 873 DV-KTGQQQFQLNGHTRTVMSVCFSPNGTLLASGSGDITIILWDVKKGVKKSSLNGHSHY 931
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
V S G LL GS + ++DV+ G+P
Sbjct: 932 VASVCFSF--DGTLLASGSGDKTILLWDVKTGQP 963
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 76/302 (25%), Positives = 124/302 (41%), Gaps = 39/302 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + A+G IR++++K+ + HS + S+ + P
Sbjct: 312 FSPDGTTLASGSDDHSIRLWDVKT---GQQKARLDGHSN----------GVRSVCFSP-- 356
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G L SG YD + +D++ + D H V+SV +S L ASGS + T+++
Sbjct: 357 DGTTLASGSYDHSIRLWDVKTGQQKAKLDGHSS-YVYSVCFSPDGTTL-ASGS-EVTIRL 413
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + + + V F P GS+L A+G D+ +DV+ V
Sbjct: 414 WDVKTGQQK----AKLDGHLNGILSVCFSPEGSTL-ASGSNDESICLWDVKTGQQKV-TL 467
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
DGH + + F D L + +D C++ W++ + GH N V S G
Sbjct: 468 DGHIGKILSVCFSPDGTALASGSSDKCIRFWDIKAIQQKIELNGHSNGILSVCFS--PDG 525
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
L G + ++DV+ G+ D V SVC+ G T++A G
Sbjct: 526 STLASGGYNKSICLWDVKTGQQKSRLD--------GHTSCVRSVCFSPDG----TILASG 573
Query: 349 SD 350
SD
Sbjct: 574 SD 575
Score = 46.6 bits (109), Expect = 0.020, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 27/268 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + + F P + A+G IR++++K+ A +D Y +C
Sbjct: 346 SNGVRSVCFSPDGTTLASGSYDHSIRLWDVKT----GQQKAKLDGHSSYVYSVC------ 395
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ P G L SG + + +D++ + D H + SV +S L ASG
Sbjct: 396 ---FSP--DGTTLASGS-EVTIRLWDVKTGQQKAKLDGHLN-GILSVCFSPEGSTL-ASG 447
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D ++ +WD + K V + V F P G++L A+G +DK +D+ K
Sbjct: 448 SNDESICLWDVKTGQQK----VTLDGHIGKILSVCFSPDGTAL-ASGSSDKCIRFWDI-K 501
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + +GH + + F D TL + G + + LW+V + GH + V
Sbjct: 502 AIQQKIELNGHSNGILSVCFSPDGSTLASGGYNKSICLWDVKTGQQKSRLDGHTSCVRSV 561
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWG 308
S G +L GS+ + + +++++ G
Sbjct: 562 CFS--PDGTILASGSDDSSIRLWNIKTG 587
>gi|224100461|ref|XP_002311885.1| predicted protein [Populus trichocarpa]
gi|222851705|gb|EEE89252.1| predicted protein [Populus trichocarpa]
Length = 802
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEH-GGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G S D S+ VL A+G+ GT++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE---VLVAAGAASGTIK 84
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V+FHPFG A+G D +D+RK +
Sbjct: 85 LWD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 138
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V+ IRF D +V+ G D +KLW++ +++ +K H + H
Sbjct: 139 YKGHTRGVSAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKYHEGQIQCIDFH--PH 196
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V +D + FE + +AG+E
Sbjct: 197 EFLLATGSADRTVKFWD--------LETFELIGSAGTE 226
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S+V C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEV 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 R 306
R
Sbjct: 131 R 131
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 36/237 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSLKWK 106
++F P FA+G + ++I++I+ K C + Y +S++++
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIR--------------KKGCIHTYKGHTRGVSAIRFT 152
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + SG D V +DL + + H G ++ +D+ + +L A+GS D T
Sbjct: 153 P--DGRWVVSGGEDNTVKLWDLTAGKLLHDFKYHEG-QIQCIDFHPHEFLL-ATGSADRT 208
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
++ WD + + + + + V C+ F+P G +L+ K ++++ + D V
Sbjct: 209 VKFWD--LETFELIGSA--GTETTGVRCLTFNPDGRTLLCGLHESLKVFSWEPIRCHDAV 264
Query: 227 LVFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V + R D++ L + C+ +W V+ SR+ G+ N N
Sbjct: 265 --------DVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYAIGNANRFN 313
>gi|449531545|ref|XP_004172746.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
40 kDa protein-like [Cucumis sativus]
Length = 344
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 32/290 (11%)
Query: 26 NLRTTVSSSSSPNAAVS---DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
N++ SS SP +S +I ++F+P +V A+G ++I ++N+
Sbjct: 35 NVKQRTSSLESPIMLLSGHQSAIYTLKFNPDGNVVASGSHDKEIFLWNV----------- 83
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
H ++ + K + L G + S D + +D+E I + EH
Sbjct: 84 ---HGDCKNFMVLRGHKNAVLDLHWTVDGSQIVSASPDKTLRAWDVETGKQIKKMAEHSS 140
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+G P++ SGSDDGT ++WD R G +Q + + V F S
Sbjct: 141 FVNSCCPTRRGPPLI-VSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSD-AS 193
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
+ G D +D+RK + ++ GH+ +T ++ D L+T G D L +W++
Sbjct: 194 DKIFTGGIDNDVKVWDLRKG-EVMMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDM 252
Query: 262 N----DSRVIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+R ++ ++GH +N +N + S G + GS V+++D
Sbjct: 253 RPYAPQNRCVKIFEGHQHNFXKNLLKCSWSADGSKVTAGSSDRMVYIWDT 302
>gi|153874934|ref|ZP_02002955.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
PS]
gi|152068602|gb|EDN67045.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
PS]
Length = 309
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 20/254 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L SG D + +++ + + H + V+SV +S ++ ASGS D T+++W
Sbjct: 39 GQLLASGSKDNTIKVWEVNTRKLLHTLQGHE-KDVFSVAFSPNGRLI-ASGSWDKTVKLW 96
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
R GK + T Q + + S V V F P GS L+AAG + + V + + +
Sbjct: 97 --RMSDGKLLETFQEAENSSPVNTVAFSPDGS-LLAAGLWNNTIKVWKVN-LAHHLYTLE 152
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D L +A D +KLW +N+ + RT H ++ V + G
Sbjct: 153 GHEDAVWSVAFSNDNQRLASASYDKTIKLWEMNEGTLQRTLTKHQDSVFAVAFN--PDGH 210
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
L S ++DV G+ ++ + +GF V D L G
Sbjct: 211 YLASASHDKTFKLWDVEEGQSLF-----------TMKGFKEVVFSVAFSPDGQFLATGND 259
Query: 350 DGLLHVFVGKKKPL 363
D + V+ +KK L
Sbjct: 260 DATIFVWGIEKKQL 273
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G +L +G ++ + + + ++ + H VWSV +S + L AS S D T+++W
Sbjct: 125 GSLLAAGLWNNTIKVWKVNLAHHLYTLEGHEDA-VWSVAFSNDNQRL-ASASYDKTIKLW 182
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ + G T+ + + +V V F+P G L A+ DK +DV + +
Sbjct: 183 E--MNEGTLQRTL--TKHQDSVFAVAFNPDGHYL-ASASHDKTFKLWDVEEG-QSLFTMK 236
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
G ++ V + F D L T D + +W + +++ T GH + V S G
Sbjct: 237 GFKEVVFSVAFSPDGQFLATGNDDATIFVWGIEKKQLLETLSGHQESVYSVVFS--PDGQ 294
Query: 290 LLGCGSETNQVFVY 303
LL S N + ++
Sbjct: 295 LLASASGDNTIKLW 308
>gi|428204860|ref|YP_007100486.1| WD-40 repeat-containing protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012979|gb|AFY91095.1| WD-40 repeat-containing protein [Chroococcidiopsis thermalis PCC
7203]
Length = 1226
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 25/234 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + F P A+G + +R++++++ + +
Sbjct: 853 SSCVWAVAFSPDGQTLASGSLDLSVRLWDVQN-------------GTCLKTFQGRTNGVR 899
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+++ P G +L SG YD +V +D +++ F+ +W+V + +L AS
Sbjct: 900 SVRFSP--DGSMLASGGYDALVRLWDWQQET--FKALPGHTDWIWAVAFHPHGHML-ASA 954
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D T+++W+ R G C T+Q S VC V F P G ++A+G D +DV+
Sbjct: 955 SEDQTIRLWNAR--DGTCCQTLQ--GHTSWVCAVSFSPNGQ-MLASGSHDDSVRLWDVQD 1009
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+ GH V + F D TL + D ++LW+V D +RT +G++
Sbjct: 1010 GT-CLRTLQGHTSWVWAVAFSPDGHTLASGSNDRTVRLWDVRDGTCLRTLQGYM 1062
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++SL + P G +L SG D V + L+ F+ + VW+V +S L A
Sbjct: 814 VTSLSFSP--DGSMLASGSEDASVRLWSLQDGA-CFQLLQGHSSCVWAVAFSPDGQTL-A 869
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD G C+ T Q + V V F P GS ++A+G D +D
Sbjct: 870 SGSLDLSVRLWD--VQNGTCLKTFQ--GRTNGVRSVRFSPDGS-MLASGGYDALVRLWDW 924
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
++ + GH + + F L +A D ++LWN D +T +GH +
Sbjct: 925 QQ--ETFKALPGHTDWIWAVAFHPHGHMLASASEDQTIRLWNARDGTCCQTLQGHTSWVC 982
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
V S +G +L GS + V ++DV+ G
Sbjct: 983 AVSFS--PNGQMLASGSHDDSVRLWDVQDG 1010
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 23/235 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P + A+ + IR++N + C + +
Sbjct: 936 TDWIWAVAFHPHGHMLASASEDQTIRLWNARD-------------GTCCQTLQGHTSWVC 982
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
++ + P +G++L SG +D V +D++ + H VW+V +S L ASG
Sbjct: 983 AVSFSP--NGQMLASGSHDDSVRLWDVQDGTCLRTLQGHTSW-VWAVAFSPDGHTL-ASG 1038
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D T+++WD R G C+ T+Q V V F P G ++A +D ++V+
Sbjct: 1039 SNDRTVRLWDVR--DGTCLRTLQ--GYMGWVFSVAFSPDGQ-ILATSSSDFSVRFWNVQD 1093
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ D + T + F + L ++G D ++LW+V D + +GH +
Sbjct: 1094 GTCLATLHDHINRIHTSVAFSPNGRILASSGEDQTIRLWDVRDGACQKVLQGHTS 1148
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 89/386 (23%), Positives = 146/386 (37%), Gaps = 80/386 (20%)
Query: 34 SSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYY 93
++S A + S+ + F+P S+ ATG KI ++ VVD +V
Sbjct: 572 ATSVFAEILSSVVSVSFNPDGSLLATGDTEGKICLWR------------VVDGQQVL--- 616
Query: 94 ICTPAKLSSLKWKPGTS--GRVLGSGDYDGVVMEYDLE------------------KKVP 133
T +S W S G+ L S D ++ +D++ +P
Sbjct: 617 --TLKGHTSWVWAVPFSPDGKTLASCSNDSLIRLWDVQTIDFEPSNPATLAEASNSSHLP 674
Query: 134 IFERDEHGGR--RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
+ + G RVW++ +S D L ASGS+D T+++W+ G C+ +Q
Sbjct: 675 VTCLNTLRGHSSRVWTLAFSL-DGQLLASGSEDRTIRLWNAH--DGTCLMVLQ--GHTGG 729
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V V F P G ++A+ D + V + GH V + F D TL +
Sbjct: 730 VTSVSFSPNGQ-ILASASEDSSIRLWSVAHGTS-LNTLRGHSSWVWAVAFSPDGQTLASG 787
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG-- 308
D ++LW V + +GH + LS G +L GSE V ++ ++ G
Sbjct: 788 SGDCTIRLWEVQTGTCRKILQGHTD--WVTSLSFSPDGSMLASGSEDASVRLWSLQDGAC 845
Query: 309 --------EPVWVHDFEP---VTAAGSE------------------RGFVSSVCWRRVGE 339
VW F P A+GS +G + V R
Sbjct: 846 FQLLQGHSSCVWAVAFSPDGQTLASGSLDLSVRLWDVQNGTCLKTFQGRTNGVRSVRFSP 905
Query: 340 DECTLVAGGSDGLLHVFVGKKKPLSA 365
D L +GG D L+ ++ +++ A
Sbjct: 906 DGSMLASGGYDALVRLWDWQQETFKA 931
>gi|119510750|ref|ZP_01629877.1| Serine/Threonine protein kinase with WD40 repeats [Nodularia
spumigena CCY9414]
gi|119464614|gb|EAW45524.1| Serine/Threonine protein kinase with WD40 repeats [Nodularia
spumigena CCY9414]
Length = 1093
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 104/235 (44%), Gaps = 28/235 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+SI + + A+G + I+I+N+ + + V + HS+ +
Sbjct: 765 SNSINSVAYSHDGQTLASGSWDKTIKIWNVTT---GNLVQTLTGHSE----------NIW 811
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ + P G+ L S D + +D+ K + F H + SV YS L A
Sbjct: 812 CVAYSP--DGQTLASASVDRTIKLWDVSTGKLLQTFPGHSHS---INSVAYSHDGQTL-A 865
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD GK + T+ S AV + F P G +L A+G AD +DV
Sbjct: 866 SGSSDKTIKLWD--VSTGKLLQTL--SGHSEAVVSIAFSPDGQTL-ASGSADNTIKLWDV 920
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ GH V+ + F D TL + D +KLWNV+ R++R GH
Sbjct: 921 -ATARLLQTLSGHSYGVSSVAFCPDSQTLASGSGDNTIKLWNVSTGRLVRNLSGH 974
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV YS+ L ASGS D T+++WD G + T+ + +++ V + G +L
Sbjct: 726 VSSVAYSRDGQTL-ASGSWDKTIKIWD--VTTGNLLQTL--TGHSNSINSVAYSHDGQTL 780
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
A+G DK ++V + V GH + + + + D TL +A D +KLW+V+
Sbjct: 781 -ASGSWDKTIKIWNVTTG-NLVQTLTGHSENIWCVAYSPDGQTLASASVDRTIKLWDVST 838
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
++++T+ GH ++ N V S G L GS + ++DV G+ + T +G
Sbjct: 839 GKLLQTFPGHSHSINSVAYS--HDGQTLASGSSDKTIKLWDVSTGKLL-------QTLSG 889
Query: 324 SERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
VS D TL +G +D + ++
Sbjct: 890 HSEAVVSIA----FSPDGQTLASGSADNTIKLW 918
>gi|299748612|ref|XP_001839264.2| coatomer beta' subunit [Coprinopsis cinerea okayama7#130]
gi|298408052|gb|EAU82527.2| coatomer beta' subunit [Coprinopsis cinerea okayama7#130]
Length = 534
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 138/335 (41%), Gaps = 48/335 (14%)
Query: 40 AVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK 99
A SD + ++F P++ ++IYN H +++ +V + + T
Sbjct: 11 ARSDRVKAVDFHPTEPWLLCALYNGTVQIYN-------HTTGSLIKSFEVAEVPVRTAKF 63
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG- 158
++ W V GS D+ V Y+ +KV FE R + P L
Sbjct: 64 IARKNW------FVAGSDDFQLRVFNYNTHEKVASFEAHPDYIRCL------TVHPTLSI 111
Query: 159 -ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
+GSDD T++ WD G KC+ + + ++F+P S+ + C D+ +
Sbjct: 112 VLTGSDDMTIKAWDWE-KGWKCIQVYE--GHTHYIMSLQFNPKDSNTFISACLDRTIKIW 168
Query: 218 DV------RKMVDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIR 268
+ P L + H K V Y+ D L T G D +K+++ ++
Sbjct: 169 SLASGSYSSTTTSPNLTLEAHDKGVNYVDLYPLSDKPYLATCGDDKTVKVYDYLSKSCVQ 228
Query: 269 TYKGHVNNRNFVGLSVWRHGG-LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG 327
T +GH NN +F +VW G L+ GSE V +++ + E G ER
Sbjct: 229 TLEGHTNNVSF---AVWLEGMPLIVSGSEDGTVKIWNAN------TYRIENTLNYGLERA 279
Query: 328 FVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKKP 362
+ ++ R G +E + G +G++ V +G+ +P
Sbjct: 280 WCVAL---RKGANE--IAVGFDEGVVIVKLGRDEP 309
>gi|254426115|ref|ZP_05039832.1| hypothetical protein S7335_683 [Synechococcus sp. PCC 7335]
gi|196188538|gb|EDX83503.1| hypothetical protein S7335_683 [Synechococcus sp. PCC 7335]
Length = 1236
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 44/286 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+G R +R+++ K+ K + S+ + P
Sbjct: 655 VAFSPDGTQLASGSADRTVRLWDAKT-------------GKCLKVLEGHQNWVMSVAFSP 701
Query: 108 GTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
G L SG D V + + K + E HG VWSV ++ L ASGS D
Sbjct: 702 --DGTQLASGSADRTVRLWHVASGKCQRVLEGHGHG---VWSVAFAATADYL-ASGSADR 755
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMV 223
T+++WD R G+C+ T+ + V V FHP GS L A+G AD+ +DV K +
Sbjct: 756 TVRLWDVRT--GECLKTLID--HQHGVWSVAFHPDGSQL-ASGSADQTVRLWDVPSGKCL 810
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
D +L GH + + F D L T D ++LWNV + +R GH N +
Sbjct: 811 DTLL---GHSNWIWTVAFSPDGSQLATGSADQTVRLWNVATRQCLRVLAGHSNWVWSIAF 867
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
S +G L GSE + ++++ G+ VW F P
Sbjct: 868 S--PNGHYLTSGSEDRTMRLWNLMSGQCLKSLQGSGNWVWALAFSP 911
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 121/289 (41%), Gaps = 22/289 (7%)
Query: 24 DFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAV 83
D ++ SSS +I + F P+ A+G + ++ + L P
Sbjct: 929 DMQADLSLESSSKTLFGAQKAIWSVVFSPNGRQLASGNEDGGVHLWQLDKQLWRSP---- 984
Query: 84 VDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR 143
SK +Y + + S +G L SG D + +DL+ + + G
Sbjct: 985 ---SKGESHYRFSGHEKSVWSVAFSPTGDRLASGSADQSIKLWDLDTRKC---QQTLTGH 1038
Query: 144 RVW--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG 201
+ W SV + + +L ASGS D T+++WD CV+T + S + C+ F P G
Sbjct: 1039 QHWVSSVAFHPEENLL-ASGSYDRTIKLWDLATH--NCVATWR--GHTSGLWCIAFSPTG 1093
Query: 202 SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN 260
LV+ G D +D +F+GH+ V + D + +A D ++LWN
Sbjct: 1094 DFLVS-GSLDCTVRLWDTHTGTCKQ-IFEGHKNWVISVAVSPDGQCIASASADRTVRLWN 1151
Query: 261 VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ +++ +GH N+ V S G +L GS+ + ++ V G+
Sbjct: 1152 THSGQLVHALQGHTNSVWSVDFS--PDGKMLASGSDDKTIRLWSVETGD 1198
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 42/271 (15%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-----VLVDHP--------------VVA 82
S+ I + F P S ATG + +R++N+ + VL H + +
Sbjct: 817 SNWIWTVAFSPDGSQLATGSADQTVRLWNVATRQCLRVLAGHSNWVWSIAFSPNGHYLTS 876
Query: 83 VVDHSKVCDYYICTPAKLSSLK------WKPGTS--GRVLGSGDYDGVVMEYDLEKKVPI 134
+ + + + + L SL+ W S G+ L SG D ++ D++ + +
Sbjct: 877 GSEDRTMRLWNLMSGQCLKSLQGSGNWVWALAFSPDGKTLASGQGDRSLVLRDMQADLSL 936
Query: 135 FERDEH---GGRRVWSVDYSKGDPVLGASGSDDGTMQMW--DPRC--DGGKCVSTVQPSA 187
+ + +WSV +S L ASG++DG + +W D + K S + S
Sbjct: 937 ESSSKTLFGAQKAIWSVVFSPNGRQL-ASGNEDGGVHLWQLDKQLWRSPSKGESHYRFSG 995
Query: 188 SRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD 245
+V V F P G L A+G AD+ K + D RK GH+ V+ + F +
Sbjct: 996 HEKSVWSVAFSPTGDRL-ASGSADQSIKLWDLDTRKCQQ---TLTGHQHWVSSVAFHPEE 1051
Query: 246 TLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
L+ +G+ D +KLW++ + T++GH +
Sbjct: 1052 NLLASGSYDRTIKLWDLATHNCVATWRGHTS 1082
>gi|449018709|dbj|BAM82111.1| probable polyadenylation factor I subunit 2 Pfs2p [Cyanidioschyzon
merolae strain 10D]
Length = 485
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 69/119 (57%), Gaps = 8/119 (6%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
SVD+ +L ASGS D +++WDP+ GKC++T+ A ++AV V ++P ++ +
Sbjct: 243 SVDWHPTRGLL-ASGSKDSLIKLWDPK--SGKCLTTIH--AHKNAVVKVRWNPSNANYLL 297
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVND 263
+G D+ D+R M+ V F GHR+ VT + + + DT V+AG DG L W + D
Sbjct: 298 SGSRDQTVKLIDIR-MMRSVQSFHGHRREVTTLAWHPIQEDTFVSAGYDGSLFFWVLGD 355
>gi|186680883|ref|YP_001864079.1| hypothetical protein Npun_F0353 [Nostoc punctiforme PCC 73102]
gi|186463335|gb|ACC79136.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
Length = 1218
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 41/311 (13%)
Query: 4 FHDHQQPQAETTNERARCEWDFN----LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFAT 59
F Q A ++++ WD N LRT +SS I + F + A+
Sbjct: 650 FSPDGQLLASCSSDKTIRLWDVNTGKCLRTLSGHTSS--------IWSVAFSADGQMLAS 701
Query: 60 GGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDY 119
GG IR++N+ + D K+ + ++ SL + + G+ L SG
Sbjct: 702 GGDEPTIRLWNVNTG----------DCHKI---FSGHTDRILSLSFS--SDGQTLASGSA 746
Query: 120 DGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGK 178
D + + + + +R G R+WS+ +S L SGS D T+++W+ G
Sbjct: 747 DFTIRLWKISGEC---DRILEGHSDRIWSISFSPDGQTL-VSGSADFTIRLWE--VSTGN 800
Query: 179 CVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTY 238
C + +Q + R V + F P LV+A +D K + + + GH ++
Sbjct: 801 CFNILQEHSDR--VRSLAFSPNAQMLVSA--SDDKTVRIWEASTGECLNILPGHTNSIFS 856
Query: 239 IRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSET 297
+ F +D T+ + TD +KLW+VN R +T KG+ N+ V ++ G L GS
Sbjct: 857 VAFNVDGRTIASGSTDQTVKLWDVNTGRCFKTLKGYSNSVFSVAFNL--DGQTLASGSTD 914
Query: 298 NQVFVYDVRWG 308
V ++DV G
Sbjct: 915 QTVRLWDVNTG 925
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV +S +L ASGSDD T+++W GKC++ +Q S + CV F P G +
Sbjct: 980 VQSVAFSPDRQIL-ASGSDDQTIRLWS--VSTGKCLNILQ--GHSSWIWCVTFSPNGE-I 1033
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDS 264
VA+ D+ + R + + + +GH V I F ++++ D ++LW+V+
Sbjct: 1034 VASSSEDQTIRLWS-RSTGECLQILEGHTSRVQAIAFSPDGQILSSAEDETVRLWSVDTG 1092
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE-----PVWVHDFEPV 319
+ ++GH N+ V S G +L S V ++D G PV H
Sbjct: 1093 ECLNIFQGHSNSVWSVAFS--PEGDILASSSLDQTVRIWDRHTGVCLKVLPVLPHAMRSA 1150
Query: 320 TAAG 323
A G
Sbjct: 1151 IAFG 1154
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 39/298 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD I I F P +G IR++ + + + + +HS ++
Sbjct: 767 SDRIWSISFSPDGQTLVSGSADFTIRLWEVST---GNCFNILQEHSD----------RVR 813
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL + P V S D + E + + I + ++SV ++ + ASG
Sbjct: 814 SLAFSPNAQMLVSASDDKTVRIWEASTGECLNILPGHTNS---IFSVAFNVDGRTI-ASG 869
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD + G+C T++ ++V V F+ G +L A+G D+ +DV
Sbjct: 870 STDQTVKLWD--VNTGRCFKTLK--GYSNSVFSVAFNLDGQTL-ASGSTDQTVRLWDVNT 924
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ F GH VT + F D D L ++ D ++LW+V+ + ++ K HVN V
Sbjct: 925 GT-CLKKFAGHSGWVTSVAFHPDGDLLASSSADRTIRLWSVSTGQCLQILKDHVNWVQSV 983
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP---VTAAGSE 325
S R +L GS+ + ++ V G+ +W F P + A+ SE
Sbjct: 984 AFSPDRQ--ILASGSDDQTIRLWSVSTGKCLNILQGHSSWIWCVTFSPNGEIVASSSE 1039
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 32/292 (10%)
Query: 24 DFNLRTTVSSSSSPNAAV-SDSIGV----IEFDPSDSVFATGGIARKIRIYNIKSVLVDH 78
D NL SS + V +++ G+ I F P ++ ATG ++R++ + + +
Sbjct: 577 DVNLHNVNFESSDLSQCVFAETFGMVFAGIAFSPDGTLLATGDAEGELRLWEVATGKL-- 634
Query: 79 PVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERD 138
VV H + SL + P G++L S D + +D+ +
Sbjct: 635 -VVNFAGHL----------GWVWSLAFSP--DGQLLASCSSDKTIRLWDVNTGKCLRTLS 681
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
H +WSV +S D + ASG D+ T+++W+ + G C R + + F
Sbjct: 682 GHTS-SIWSVAFS-ADGQMLASGGDEPTIRLWN--VNTGDCHKIFSGHTDR--ILSLSFS 735
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLK 257
G +L A+G AD + + D +L +GH + I F D TLV+ D ++
Sbjct: 736 SDGQTL-ASGSADFTIRLWKISGECDRIL--EGHSDRIWSISFSPDGQTLVSGSADFTIR 792
Query: 258 LWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
LW V+ + H + + S + +L S+ V +++ GE
Sbjct: 793 LWEVSTGNCFNILQEHSDRVRSLAFS--PNAQMLVSASDDKTVRIWEASTGE 842
>gi|298244841|ref|ZP_06968647.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
44963]
gi|297552322|gb|EFH86187.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
44963]
Length = 1251
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 39/317 (12%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D I V+ P+ +A G K+R++ + V H V H+ V + +
Sbjct: 613 DVIDVVAISPTGQYWAAAGYQGKVRLWR-DAGRVLHRVWQA--HTNV----------IET 659
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
L + P +GR+L SG +D + +D+E ++ +HG V V ++ D L SG
Sbjct: 660 LTFSP--NGRLLVSGAWDDTIKLWDVESGKLLWTGVQHGN--VNCVTFTP-DGRLLTSGG 714
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD--VR 220
D +Q+WD + G + Q + VC +++ P G+ L A GCAD + + V
Sbjct: 715 GDARIQLWDTQ--SGTVIQ--QITNQGGTVCWLDWSPDGTQL-ATGCADGNIWLWQPGVS 769
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ + V GH VT + F + L +A DG +KLW++ I+T+ GH +
Sbjct: 770 EPENHVHQLSGHTHWVTGLAFAPNGIQLASASFDGTVKLWDLERLECIQTFSGHTDR--- 826
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
V VW G V + + +W+ D + A R +++
Sbjct: 827 VIRVVWSPDGRT----------VASAGFDKTIWLWDTQEQRARAVLREHTAAIFSLAFTP 876
Query: 340 DECTLVAGGSDGLLHVF 356
D TL++G SDG + +
Sbjct: 877 DSRTLLSGSSDGTIRAW 893
Score = 44.7 bits (104), Expect = 0.068, Method: Composition-based stats.
Identities = 75/325 (23%), Positives = 130/325 (40%), Gaps = 41/325 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
++ + F P + +GG +I++++ +S V + VC L
Sbjct: 697 NVNCVTFTPDGRLLTSGGGDARIQLWDTQSGTVIQQITN--QGGTVC-----------WL 743
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGS 162
W P G L +G DG + + P + G W + + + AS S
Sbjct: 744 DWSP--DGTQLATGCADGNIWLWQPGVSEPENHVHQLSGHTHWVTGLAFAPNGIQLASAS 801
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DGT+++WD + +C+ T R V V + P G ++ +AG DK + +D ++
Sbjct: 802 FDGTVKLWD--LERLECIQTFSGHTDR--VIRVVWSPDGRTVASAG-FDKTIWLWDTQEQ 856
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
V H + + F D TL++ +DG ++ W+V + + G+V + V
Sbjct: 857 -RARAVLREHTAAIFSLAFTPDSRTLLSGSSDGTIRAWDVERGQCLHVIGGYVASLYDVD 915
Query: 282 LSVWRHGG--LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
W G L G++T V ++D G P +G RG +V
Sbjct: 916 ---WNPDGKQLFTAGADT-LVTIWDRASGAP-----------SGILRGHRWTVFGIAASP 960
Query: 340 DECTLVAGGSDGLLHVF-VGKKKPL 363
D LV+ G D + ++ VG PL
Sbjct: 961 DGQLLVSTGHDNHMALWEVGNDVPL 985
>gi|145482657|ref|XP_001427351.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394431|emb|CAK59953.1| unnamed protein product [Paramecium tetraurelia]
Length = 1084
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 132/302 (43%), Gaps = 32/302 (10%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A +++R+ C WD N ++ + + F P+ A+G + IR+Y+I
Sbjct: 732 ASGSDDRSICLWDVN----TGDQKVKFKNHTNDVCTVCFSPNGHTIASGSDDKSIRLYDI 787
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
++ + + H+K IC+ SG L SG YD + +D+++
Sbjct: 788 QT---EQQTAKLDGHTKA----ICSVC--------FSNSGCTLASGSYDKSIRLWDVKRG 832
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
+ + H G V SV++S D L ASGS D ++ +WD + K + +
Sbjct: 833 QQKIKLEGHSGA-VMSVNFSPDDTTL-ASGSADWSILLWDVKTGQQK----AKLKGHSNY 886
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFLDVDTLVT 249
V V F P G+ L A+G DK +DVR ++ D + + +V Y F D L +
Sbjct: 887 VMSVCFSPDGTEL-ASGSHDKSICLWDVRTGQLKDRLGGHINYVMSVCY--FPDGTKLAS 943
Query: 250 AGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
D ++LW+V + GH N V S+ G L GS + + +++++ G+
Sbjct: 944 GSADNSIRLWDVRTGCQKVKFNGHTNGILSVCFSL--DGTTLASGSNDHSIRLWNIQTGQ 1001
Query: 310 PV 311
+
Sbjct: 1002 NI 1003
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 26/264 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F P+ + ATG I + N K++ V + H+ + S+ + P
Sbjct: 638 ISFSPNGRILATGSSDNSIHLLNTKTL---EKVAKLDGHTN----------SVKSVCFSP 684
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
++ L SG DG + Y+++ + + D H V ++ +S D L ASGSDD ++
Sbjct: 685 DST--TLASGSLDGSIRFYEVKNEFQSVKLDGHSD-NVNTICFSP-DGTLLASGSDDRSI 740
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+WD K V+ + VC V F P G + +A+G DK YD++
Sbjct: 741 CLWDVNTGDQK----VKFKNHTNDVCTVCFSPNGHT-IASGSDDKSIRLYDIQ-TEQQTA 794
Query: 228 VFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
DGH K + + F + TL + D ++LW+V + +GH V S
Sbjct: 795 KLDGHTKAICSVCFSNSGCTLASGSYDKSIRLWDVKRGQQKIKLEGHSGAVMSVNFS--P 852
Query: 287 HGGLLGCGSETNQVFVYDVRWGEP 310
L GS + ++DV+ G+
Sbjct: 853 DDTTLASGSADWSILLWDVKTGQQ 876
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 135/316 (42%), Gaps = 37/316 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++S+ + F P + A+G + IR Y +K+ + V + HS + +P
Sbjct: 674 TNSVKSVCFSPDSTTLASGSLDGSIRFYEVKN---EFQSVKLDGHSDNVNTICFSP---- 726
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G +L SG D + +D+ + H V +V +S + ASG
Sbjct: 727 --------DGTLLASGSDDRSICLWDVNTGDQKVKFKNH-TNDVCTVCFSPNGHTI-ASG 776
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD +++++D + + T + A+C V F G +L A+G DK +DV++
Sbjct: 777 SDDKSIRLYDIQTEQ----QTAKLDGHTKAICSVCFSNSGCTL-ASGSYDKSIRLWDVKR 831
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + +GH V + F DT + +G+ D + LW+V + KGH N V
Sbjct: 832 GQQKIKL-EGHSGAVMSVNFSPDDTTLASGSADWSILLWDVKTGQQKAKLKGHSNYVMSV 890
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S G L GS + ++DVR G+ + D G +V SVC+ D
Sbjct: 891 CFS--PDGTELASGSHDKSICLWDVRTGQ---LKD-----RLGGHINYVMSVCYF---PD 937
Query: 341 ECTLVAGGSDGLLHVF 356
L +G +D + ++
Sbjct: 938 GTKLASGSADNSIRLW 953
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 135/326 (41%), Gaps = 38/326 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+DS+ + F A+G IRI+++K+ + + H+ +
Sbjct: 299 ADSVESVSFSRDGITLASGSKDCSIRIWDVKT---GYQKAKLDGHTN----------SVQ 345
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+++ P + L SG D + +D++ + + D H + S+ +S L SG
Sbjct: 346 SVRFSPNNT---LASGSKDKSIRIWDVKAGLQKAKLDGHT-NSIKSISFSPDGTTL-VSG 400
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D +++WD T + AV + F G +L A+G DK +DV
Sbjct: 401 SRDKCIRIWDVMM----TQYTTKQEGHSDAVQSICFSHDGITL-ASGSKDKSICIWDVNS 455
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+GH +V + F D TL + D +++W+V I +GH N+ V
Sbjct: 456 G-SLKKKLNGHTNSVKSVCFSPDGITLASGSKDCSIRIWDVKAGNQIAKLEGHTNSVKSV 514
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
LS G +L GS+ + ++DV+ G F+ A S V SVC+ D
Sbjct: 515 CLSY--DGTILASGSKDKSIHIWDVKTGN----RKFKLDGHANS----VKSVCF---SID 561
Query: 341 ECTLVAGGSDGLLHVFVGKKKPLSAQ 366
TL +G D + ++ K L A+
Sbjct: 562 GITLASGSGDKSIRLWDFKMGYLKAK 587
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 19/197 (9%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D + ASGS D ++ +WD R K + +V V F G +L A+G D
Sbjct: 268 DGTILASGSKDKSIHIWDVRTGYKK----FKLDGHADSVESVSFSRDGITL-ASGSKDCS 322
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+DV+ + DGH +V +RF +TL + D +++W+V GH
Sbjct: 323 IRIWDVKTGYQKAKL-DGHTNSVQSVRFSPNNTLASGSKDKSIRIWDVKAGLQKAKLDGH 381
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVC 333
N+ + S G L GS + ++DV + T V S+C
Sbjct: 382 TNSIKSISFS--PDGTTLVSGSRDKCIRIWDVMMT--------QYTTKQEGHSDAVQSIC 431
Query: 334 WRRVGEDECTLVAGGSD 350
+ D TL +G D
Sbjct: 432 F---SHDGITLASGSKD 445
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 197 FHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGC 255
F P G +L A C+ +DV+ + DGH +V + F D TLV+ G D
Sbjct: 182 FSPDGITL--ASCSRGSICIWDVQTGYQKTKL-DGHMNSVKSVCFSPDGITLVSGGKDCS 238
Query: 256 LKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+++W+ + KGH N+ V LS G +L GS+ + ++DVR G
Sbjct: 239 IRIWDFKAGKQKAKLKGHTNSVKSVCLSY--DGTILASGSKDKSIHIWDVRTG 289
>gi|449268857|gb|EMC79694.1| Katanin p80 WD40-containing subunit B1, partial [Columba livia]
Length = 648
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 22/245 (8%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+SGR+L +G D V + + K I H + S+ + + ++ A GS G+++
Sbjct: 18 SSGRLLATGGDDCRVNIWSVNKPNCIMSLTGHTTP-IESLQINMNEKLIVA-GSQSGSIR 75
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K + T+ ++ +C ++FHPFG S VA+G D +DVR+ V
Sbjct: 76 VWD--LEAAKILRTLL--GHKANICSLDFHPFG-SFVASGSLDTNIKLWDVRRK-GCVFR 129
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 130 YKGHTEAVRCLRFSPDGKWLASAADDHTVKLWDLAAGKIMFEFTGHTGPVNVVEFHPNEY 189
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS V +D + F+ V+ E V V + D C L +G
Sbjct: 190 --LLASGSSDRTVRFWD--------LEKFQVVSCIEEEATPVRCVLF---NPDGCCLYSG 236
Query: 348 GSDGL 352
D L
Sbjct: 237 FQDSL 241
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 23/186 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSS 102
+I ++F P S A+G + I++++++ K C + Y +
Sbjct: 94 NICSLDFHPFGSFVASGSLDTNIKLWDVRR--------------KGCVFRYKGHTEAVRC 139
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
L++ P G+ L S D V +DL +FE H G V V++ + +L ASGS
Sbjct: 140 LRFSP--DGKWLASAADDHTVKLWDLAAGKIMFEFTGHTGP-VNVVEFHPNEYLL-ASGS 195
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T++ WD + + VS ++ A+ V CV F+P G L + + Y ++ +
Sbjct: 196 SDRTVRFWD--LEKFQVVSCIEEEAT--PVRCVLFNPDGCCLYSGFQDSLRVYGWEPERC 251
Query: 223 VDPVLV 228
D VLV
Sbjct: 252 FDVVLV 257
>gi|145506354|ref|XP_001439140.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406319|emb|CAK71743.1| unnamed protein product [Paramecium tetraurelia]
Length = 557
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 131/313 (41%), Gaps = 41/313 (13%)
Query: 13 ETTNERARCEWDFNLRTTVSSSSSPNAAV---------------SDSIGVIEFDPSDSVF 57
+T ++A+ W F L S SS + + SD + + F P +
Sbjct: 208 KTGQQKAKIRWSFALCLFTSGSSDNSIRLWDVKTGQQKAKLDGHSDYVRSVNFSPDGTTL 267
Query: 58 ATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSG 117
A+G IR++++K+ + HS +Y+ S+ + P G L SG
Sbjct: 268 ASGSDDNSIRLWDVKT---GQQKAKLDGHS----HYVY------SVNFSP--DGTTLASG 312
Query: 118 DYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGG 177
D + +D++ + D H V SV++S L ASGSDD ++++WD +
Sbjct: 313 SDDNSIRLWDVKTGQQKAKLDGHSD-YVRSVNFSPDGTTL-ASGSDDNSIRLWDVKTGQQ 370
Query: 178 KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVT 237
K + V V F P G++L A+G +D +DV K DGH + V
Sbjct: 371 KA----KLDGHSGYVYSVNFSPDGTTL-ASGSSDNSIRLWDV-KTGQQKAKLDGHSEAVI 424
Query: 238 YIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
+ F D TL + D ++LW+V + GH + ++ G L GS
Sbjct: 425 SVNFSPDGTTLASGSWDNSIRLWDVKTGQQKAKLDGH--EYEILSVNFSPDGTTLASGSA 482
Query: 297 TNQVFVYDVRWGE 309
N + ++DV+ G+
Sbjct: 483 DNSIRLWDVKTGQ 495
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+G IR++++K+ + HS DY + S+ + P
Sbjct: 300 VNFSPDGTTLASGSDDNSIRLWDVKT---GQQKAKLDGHS---DY-------VRSVNFSP 346
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G L SG D + +D++ + D H G V+SV++S L ASGS D ++
Sbjct: 347 --DGTTLASGSDDNSIRLWDVKTGQQKAKLDGHSGY-VYSVNFSPDGTTL-ASGSSDNSI 402
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD + K + AV V F P G++L A+G D +DV K
Sbjct: 403 RLWDVKTGQQKA----KLDGHSEAVISVNFSPDGTTL-ASGSWDNSIRLWDV-KTGQQKA 456
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH---VNNRNF---V 280
DGH + + F D TL + D ++LW+V + GH V + NF V
Sbjct: 457 KLDGHEYEILSVNFSPDGTTLASGSADNSIRLWDVKTGQQKAKLDGHSEAVISVNFSPDV 516
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+++ +G L + NQ+ ++ ++G+ +
Sbjct: 517 MITLSVYGMLRQDNKKPNQMVIHQ-QYGQSI 546
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 130/325 (40%), Gaps = 51/325 (15%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S ++ + F P + A+GG IR++++K+ + HS+V +
Sbjct: 137 SSAVQSVNFSPDGTTLASGGGDCSIRLWDVKT---GQQKAKLDGHSRV-----------N 182
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G L SG D + +D++ + + WS L SG
Sbjct: 183 SVNFSP--DGTTLASGSEDNSIRLWDVKTG-------QQKAKIRWSFAL-----CLFTSG 228
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++++WD + K + V V F P G++L A+G D +DV K
Sbjct: 229 SSDNSIRLWDVKTGQQKA----KLDGHSDYVRSVNFSPDGTTL-ASGSDDNSIRLWDV-K 282
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
DGH V + F D TL + D ++LW+V + GH + V
Sbjct: 283 TGQQKAKLDGHSHYVYSVNFSPDGTTLASGSDDNSIRLWDVKTGQQKAKLDGHSDYVRSV 342
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S G L GS+ N + ++DV+ G+ D G+V SV + D
Sbjct: 343 NFS--PDGTTLASGSDDNSIRLWDVKTGQQKAKLD--------GHSGYVYSVNF---SPD 389
Query: 341 ECTLVAGGSDG---LLHVFVGKKKP 362
TL +G SD L V G++K
Sbjct: 390 GTTLASGSSDNSIRLWDVKTGQQKA 414
>gi|449546055|gb|EMD37025.1| hypothetical protein CERSUDRAFT_124016 [Ceriporiopsis subvermispora
B]
Length = 1661
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 135/324 (41%), Gaps = 35/324 (10%)
Query: 35 SSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYI 94
+ P A ++++ + F P + +G IR+++ K+ + + + H+
Sbjct: 1099 TKPLAGHTEALSSVGFSPDGTRIISGSYDCTIRLWDAKTG--EQAIEPLTGHTDSVRSVA 1156
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
P + L SG D V +D+ I + H V SV +S D
Sbjct: 1157 FAPDGIHVL------------SGSDDQSVRMWDMRTGKEIMKPTGHANW-VCSVSFSP-D 1202
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADKK 213
SGSDDGT+++WD R D ++P + +V V F P GS + A+G +D+
Sbjct: 1203 GTQIISGSDDGTIRVWDARMDE----EAIKPLPGHTGSVMSVAFSPDGSRM-ASGSSDRT 1257
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKG 272
+D R + + GH +V + F T + +G+ D ++LW+V V + G
Sbjct: 1258 IRVWDSRTGIQVIKALRGHEGSVCSVAFSPDGTQIASGSADRTVRLWDVGTGEVSKLLMG 1317
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSV 332
H + V S G + GS+ + ++D R GE + EP+T G V
Sbjct: 1318 HTDEVKSVTFS--PDGSQIFSGSDDCTIRLWDARTGEAIG----EPLT------GHEQCV 1365
Query: 333 CWRRVGEDECTLVAGGSDGLLHVF 356
C D + +G SD + V+
Sbjct: 1366 CSVAFSPDGSRITSGSSDNTVRVW 1389
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 142/321 (44%), Gaps = 46/321 (14%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P S A+G R IR+++ ++ + V+ + + +C S+
Sbjct: 1236 SVMSVAFSPDGSRMASGSSDRTIRVWDSRTG------IQVIKALRGHEGSVC------SV 1283
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLE----KKVPIFERDEHGGRRVWSVDYSK-GDPVLG 158
+ P G + SG D V +D+ K+ + DE V SV +S G +
Sbjct: 1284 AFSP--DGTQIASGSADRTVRLWDVGTGEVSKLLMGHTDE-----VKSVTFSPDGSQIF- 1335
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
SGSDD T+++WD R G+ + +P + VC V F P GS + +G +D +
Sbjct: 1336 -SGSDDCTIRLWDART--GEAIG--EPLTGHEQCVCSVAFSPDGSR-ITSGSSDNTVRVW 1389
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVND-SRVIRTYKGHVN 275
D R + +GH TV + F D T+++ D ++W+ + +I KG +
Sbjct: 1390 DTRTATEIFKPLEGHTSTVFAVAFSPDGTTVISGSDDKTARIWDASTGEEMIEPLKG--D 1447
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
+ + ++V G + GS + ++D R G+ V P+T G G V+SV +
Sbjct: 1448 SDAILSVAVSPDGTWVASGSRDGAIRIWDARTGKEV----IPPLTGHG---GPVNSVAF- 1499
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
D + +G DG + +F
Sbjct: 1500 --SLDGTQIASGSDDGTVRIF 1518
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADK 212
D L ASGSDD T+++WD R GK V ++P + V V F P G+ +V +G +D
Sbjct: 988 DGTLIASGSDDMTVRIWDART--GKEV--IEPLTGHDGGVQSVVFSPDGTRIV-SGSSDH 1042
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNV-NDSRVIRTY 270
+D R + + GH + + T + +G+ D +++W++ V +
Sbjct: 1043 TVRVWDTRTGKEVMEPLAGHTDAINSVAISSEGTRIASGSDDNTVRVWDMATGMEVTKPL 1102
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT 320
GH + VG S G + GS + ++D + GE EP+T
Sbjct: 1103 AGHTEALSSVGFS--PDGTRIISGSYDCTIRLWDAKTGE----QAIEPLT 1146
>gi|156358502|ref|XP_001624557.1| predicted protein [Nematostella vectensis]
gi|156211345|gb|EDO32457.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 23/261 (8%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ + ++ L P T GRV+ +G D V + + + I H V V ++
Sbjct: 14 FVAHGSNINCLSLGPST-GRVMVTGGEDRKVNMWAVGQPNVIMSLAGHTSP-VECVQFNS 71
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
G+ ++ A GS GT+++WD + K + T+ + +S++ ++FHPFG VA+G D
Sbjct: 72 GEDLVVA-GSQSGTLKIWD--LEAAKILRTL--TGHKSSIRSLDFHPFGD-FVASGSLDT 125
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D+R+ + + GH V ++RF D +++ G DG KLW++ ++I +K
Sbjct: 126 NLKLWDIRRK-GCIFTYKGHTDCVNHLRFSPDGRWIISGGEDGAAKLWDLTAGKIINDFK 184
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
H N LL GS V +D+ FE V++ E +
Sbjct: 185 MHTGPVNCAEFHPKEF--LLATGSSDRTVKYWDLE--------TFELVSSTSPETHPIRC 234
Query: 332 VCWRRVGEDECTLVAGGSDGL 352
+ + D L +G D L
Sbjct: 235 IGFHT---DGLCLFSGAQDSL 252
>gi|189237178|ref|XP_966378.2| PREDICTED: similar to katanin p80 subunit, partial [Tribolium
castaneum]
Length = 777
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L +GS G +++WD + K V T+ + +SA+ CV+FHP+G +A+G +D
Sbjct: 63 LVCAGSRAGALKVWD--LEAAKLVRTL--NGHKSALKCVDFHPYGD-FLASGSSDCSIKM 117
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+D RK + ++GH+ T+ ++F D + + G D +K+W++ +V++ + H+N
Sbjct: 118 WDSRKK-GCIYTYNGHKATINSLKFSPDGHWIASGGDDATVKIWDLRVGKVLKDFGEHLN 176
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSER--GFVSSVC 333
+ V H LL GS V YD+ E + SER G V +C
Sbjct: 177 SVTCVEFH--PHEFLLASGSADRSVQFYDL-----------ENFSVVSSERDLGLVRCLC 223
Query: 334 WRRVGE 339
+ GE
Sbjct: 224 FNPDGE 229
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
++ GH + ++F + LV AG+ G LK+W++ ++++RT GH + V +
Sbjct: 43 MILSGHTTPIECVQFNQFEELVCAGSRAGALKVWDLEAAKLVRTLNGHKSALKCVDFHPY 102
Query: 286 RHGGLLGCGSETNQVFVYDVR 306
G L GS + ++D R
Sbjct: 103 --GDFLASGSSDCSIKMWDSR 121
>gi|428176672|gb|EKX45555.1| hypothetical protein GUITHDRAFT_108428 [Guillardia theta CCMP2712]
Length = 339
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 42/298 (14%)
Query: 47 VIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWK 106
+ FDP+ A+ G + I ++ + + +Y + K + L+ +
Sbjct: 51 TVRFDPTGKYLASAGHDKDIFLWEV--------------YGDCVNYGVLKGHKQAVLQLQ 96
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
G L S D +VM +D E I + H V S ++ ++GAS SDDGT
Sbjct: 97 WSFDGSNLWSCAADKMVMFWDAETGKRIKKFSGHSSF-VNSCCCTRRGVLIGASASDDGT 155
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WDPR V++++ S V VE G+ + + G D + +D+RK +
Sbjct: 156 IKVWDPRVR--NAVTSLEESYQ---VTAVELSDDGNRVFSGGL-DNEIKIWDLRKE-EIE 208
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN----VNDSRVIRTYKGHVNN--RNF 279
L GH T+T +R D L++ D +++W+ V SR GH++N +N
Sbjct: 209 LTMSGHTDTLTGLRLSPDGQMLLSNAMDNTVRVWDTRPFVEGSRCKLVMGGHMHNYEKNL 268
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGE-------------PVWVHDFEPVTAAGS 324
+ + +G GS V+V+D G+ V H FEP+ A+ S
Sbjct: 269 IRCAWSPDAARVGSGSADKMVYVWDAEHGKLQYKLPGHAGCVNEVDFHPFEPIIASAS 326
>gi|302689407|ref|XP_003034383.1| hypothetical protein SCHCODRAFT_34278 [Schizophyllum commune H4-8]
gi|300108078|gb|EFI99480.1| hypothetical protein SCHCODRAFT_34278, partial [Schizophyllum
commune H4-8]
Length = 830
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 115/279 (41%), Gaps = 31/279 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYICTPAKL 100
SD++ V+ F P A+G R +R++++ S V P+ DH Y
Sbjct: 391 SDNVNVVVFSPDGKYIASGSADRTVRVWDVASGQQVGQPLRGHDDHVWTVAY-------- 442
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
+ GR L SG YD V +D I + V SV S + S
Sbjct: 443 -------SSDGRHLVSGSYDFAVRVWDAGTGQQIGATLQGHDASVMSVALSPNAKSI-VS 494
Query: 161 GSDDGTMQMWDP---RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
GS+D T+++WD G + P+ V CV F P G +A+G D +
Sbjct: 495 GSEDRTIRIWDAPIIEHRGDDRPKPLSPAGHTDWVNCVAFSPDG-KCIASGSIDCTVRLW 553
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV----NDSRVIRTYKG 272
DV +GH V + F D L++ +DG ++LWNV S+V ++G
Sbjct: 554 DVATYHQIGQSLEGHTAQVNCVAFSPDNKRLLSGSSDGSIRLWNVETGAQSSQVFDGHRG 613
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
H+ + ++ G L+ GS+ + ++D GE V
Sbjct: 614 HI-----LAVAYSPDGTLIASGSQDSTFRLWDATTGETV 647
>gi|270007486|gb|EFA03934.1| hypothetical protein TcasGA2_TC014074 [Tribolium castaneum]
Length = 812
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L +GS G +++WD + K V T+ + +SA+ CV+FHP+G L A+G +D
Sbjct: 98 LVCAGSRAGALKVWD--LEAAKLVRTL--NGHKSALKCVDFHPYGDFL-ASGSSDCSIKM 152
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+D RK + ++GH+ T+ ++F D + + G D +K+W++ +V++ + H+N
Sbjct: 153 WDSRKK-GCIYTYNGHKATINSLKFSPDGHWIASGGDDATVKIWDLRVGKVLKDFGEHLN 211
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSER--GFVSSVC 333
+ V H LL GS V YD+ E + SER G V +C
Sbjct: 212 SVTCVEFH--PHEFLLASGSADRSVQFYDL-----------ENFSVVSSERDLGLVRCLC 258
Query: 334 WRRVGE 339
+ GE
Sbjct: 259 FNPDGE 264
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
++ GH + ++F + LV AG+ G LK+W++ ++++RT GH + V +
Sbjct: 78 MILSGHTTPIECVQFNQFEELVCAGSRAGALKVWDLEAAKLVRTLNGHKSALKCVDFHPY 137
Query: 286 RHGGLLGCGSETNQVFVYDVR 306
G L GS + ++D R
Sbjct: 138 --GDFLASGSSDCSIKMWDSR 156
>gi|224113211|ref|XP_002316424.1| predicted protein [Populus trichocarpa]
gi|222865464|gb|EEF02595.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 24/245 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEH-GGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G S D S+ VL A+G+ GT++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE---VLVAAGAASGTVK 84
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V+FHPFG A+G D +D+RK +
Sbjct: 85 LWD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 138
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V IRF D +V+ G D +KLW++ +++ +K H + H
Sbjct: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH--PH 196
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS V +D + FE + +AG E V + + G TL+ G
Sbjct: 197 EFLLATGSADRTVKFWD--------LETFELIGSAGPETTGVRCLTFNSDGR---TLLCG 245
Query: 348 GSDGL 352
+ L
Sbjct: 246 LHESL 250
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S+V C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEV 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 73 LVAAGAASGTVKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 R 306
R
Sbjct: 131 R 131
>gi|242805002|ref|XP_002484485.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218717830|gb|EED17251.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1034
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 28/269 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S SI + F P+ + A+G I+I+N L + +
Sbjct: 308 SHSINSVAFSPNGTRVASGSDDNTIKIWNADGCL---------------KTFNGHDEAVR 352
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ + SG D V +DL + HGG V SV ++ L ASG
Sbjct: 353 SVAFSP--DGKRVASGSVDQTVKIWDLSNDECLKTFTGHGGW-VRSVAFAPNGTYL-ASG 408
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD T+++WD D KC+ T+ + + V V F P G+ VA+G D +D+
Sbjct: 409 SDDQTVKIWD--VDSDKCLKTL--TGHKDYVYSVAFSPNGTH-VASGSKDNTVKIWDLNS 463
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGC-LKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + F+ H + + F T V +G+D +KLWN+N + ++T++GH N V
Sbjct: 464 E-NYIDTFNEHNDHIHSVAFSPDGTHVVSGSDDKKVKLWNINSNISLKTFEGHTNGIRSV 522
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G L S+ + ++ + G+
Sbjct: 523 AYS--PDGTFLASSSDDRTIKIWHIDSGK 549
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 11/192 (5%)
Query: 84 VDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR 143
+D+ K + + + S+ + P G+ + SG D + +DL+ + +H
Sbjct: 43 LDNDKRLNIFTGHGDYVYSIAFSP--DGKRVASGSKDKTIKVWDLDSDKCLNTFTDHE-D 99
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
V+SV +S D ASGS D T+++WD D KC++T + V V F P G
Sbjct: 100 YVYSVAFSP-DGKRVASGSKDKTIKVWD--LDSDKCLNTF--TDHEDYVYSVAFSPDGKR 154
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN 262
VA+G DK +D+ + P GH V + F D L +A D +K+W++N
Sbjct: 155 -VASGSKDKTIKIWDLNRNSSP-KTLKGHSDHVNSVAFSFDGARLASASDDKTIKIWHIN 212
Query: 263 DSRVIRTYKGHV 274
R +T++GH
Sbjct: 213 SGRCFKTFEGHT 224
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 32/267 (11%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D + + F P A+G + I+++++ S D + DH DY + S
Sbjct: 99 DYVYSVAFSPDGKRVASGSKDKTIKVWDLDS---DKCLNTFTDHE---DY-------VYS 145
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P G+ + SG D + +DL + H V SV +S L AS S
Sbjct: 146 VAFSP--DGKRVASGSKDKTIKIWDLNRNSSPKTLKGHS-DHVNSVAFSFDGARL-ASAS 201
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSAS--RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
DD T+++W + G+C T + RSAV F P G+S +A+G D +++
Sbjct: 202 DDKTIKIW--HINSGRCFKTFEGHTKPVRSAV----FSPDGTS-IASGSEDTMMKIWNID 254
Query: 221 KMVDPVL-VFDGHRKTVTYIRFLDVDTLVTAGTDG-CLKLWNVNDSRVIRTYKGHVNNRN 278
+ D F+GH + V + F V +G+D +K+WNV++ ++T +GH ++ N
Sbjct: 255 R--DHCFKTFNGHNQGVESVAFSSDGKRVASGSDDKTIKIWNVHNRSSVKTLEGHSHSIN 312
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDV 305
V S +G + GS+ N + +++
Sbjct: 313 SVAFS--PNGTRVASGSDDNTIKIWNA 337
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 138/338 (40%), Gaps = 46/338 (13%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD N + + + N D I + F P + +G +K++++NI S + +
Sbjct: 459 WDLNSENYIDTFNEHN----DHIHSVAFSPDGTHVVSGSDDKKVKLWNINSNI---SLKT 511
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
H+ + S+ + P + S D + D K FE G
Sbjct: 512 FEGHTN----------GIRSVAYSPDGTFLASSSDDRTIKIWHIDSGKCFITFEGHNAGI 561
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG- 201
R SV+YS D SGSDD +++ +GGKC+ T S + S F P G
Sbjct: 562 R---SVNYSP-DGTHVVSGSDDKVIKI--SYVNGGKCLRTFNGSFTNS----FAFSPDGN 611
Query: 202 --SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKL 258
+S++ D +D+ + GH K V + F T + +G+ D +K+
Sbjct: 612 HVASVLGFQTVDSTIKIWDLN-CNSYLKTLRGHSKGVYSVTFSPSGTHLASGSADQTVKI 670
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
W++N+ ++T+ GH + V S +G L GS V ++ + E + +
Sbjct: 671 WDLNNDECLKTFTGHGSTVRSVVFS--SNGTYLASGSADQTVKIWKINSDECL-----KT 723
Query: 319 VTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
T GS VSSV + ++ L +G D ++ ++
Sbjct: 724 FTHGGS----VSSVAFS---PNDIYLASGSDDQMVKIW 754
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 120/292 (41%), Gaps = 57/292 (19%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
++ + F P D A+G + ++I++ D+ + + ++ S+
Sbjct: 770 AVSSVAFSPDDKHMASGSSDKTVKIWDF-------------DNGQCLKTFKGHNRRVGSV 816
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLE--------KKVPIFERDEHGGRRVWSVDYSK-GD 154
+ P +G L SG D V +D+ K ++ D V SV +S G
Sbjct: 817 AFSP--NGTHLASGSEDQTVKIWDMSSNSDSNCLKTFEVYNSD------VISVAFSSDGT 868
Query: 155 PVLGASGSDDGTMQMWDPRC----DGGKCVSTVQPSAS------RSAVCC---------- 194
VL SGS G + +WD C +GG +++V + S VC
Sbjct: 869 RVL--SGSLFGAVNIWDNACLKALNGGTRIASVSDDRTFRVWDVDSGVCLHIFEHGRVSS 926
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDG 254
+ F P GSS +A+ DK +D+ + + F GH V I F T V +G+D
Sbjct: 927 IVFSPNGSS-IASASDDKTIKIWDITSG-NCLTTFKGHSDMVQSIAFSPDATRVASGSDD 984
Query: 255 -CLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+K+W+V+ ++T+ GH + V S G + GS + ++DV
Sbjct: 985 KMVKIWDVDSGNCLKTFNGHESMIMSVAFS--PDGTRVVSGSNDKTIKIWDV 1034
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 119/292 (40%), Gaps = 50/292 (17%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P+D A+G + ++I+ I +S C + +SS+
Sbjct: 729 SVSSVAFSPNDIYLASGSDDQMVKIWKI--------------YSGKCLRTLTHGGAVSSV 774
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P GS D + ++D + + F+ RRV SV +S L ASGS+
Sbjct: 775 AFSPDDKHMASGSSDKTVKIWDFDNGQCLKTFKGHN---RRVGSVAFSPNGTHL-ASGSE 830
Query: 164 DGTMQMWDPRCDG-GKCVSTVQPSASRSAVCCVEFHPFGSSLVA---------------- 206
D T+++WD + C+ T + S V V F G+ +++
Sbjct: 831 DQTVKIWDMSSNSDSNCLKTFE--VYNSDVISVAFSSDGTRVLSGSLFGAVNIWDNACLK 888
Query: 207 --------AGCADKKAY-AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLK 257
A +D + + +DV V + +F+ H + + + + ++ +A D +K
Sbjct: 889 ALNGGTRIASVSDDRTFRVWDVDSGV-CLHIFE-HGRVSSIVFSPNGSSIASASDDKTIK 946
Query: 258 LWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+W++ + T+KGH + + S + GS+ V ++DV G
Sbjct: 947 IWDITSGNCLTTFKGHSDMVQSIAFS--PDATRVASGSDDKMVKIWDVDSGN 996
>gi|220910143|ref|YP_002485454.1| hypothetical protein Cyan7425_4789 [Cyanothece sp. PCC 7425]
gi|219866754|gb|ACL47093.1| WD-40 repeat protein [Cyanothece sp. PCC 7425]
Length = 1193
Score = 68.9 bits (167), Expect = 4e-09, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 26/271 (9%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPA 98
+ ++ + + F P+ + A G I+++++K+ H D
Sbjct: 911 SGFAEGLPAVAFHPNSTTIAGGSQDATIKLWDLKTGECSHTFTGHTD------------- 957
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
++ SL + P G++L S +D V +DL + H R V +V +S +L
Sbjct: 958 EVWSLAFSP--DGQLLASSSFDHTVKLWDLNLNECCQTLEGHRDR-VAAVAFSPEGKIL- 1013
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGSDD T+++WD +C++ ++ +R + + F P G+ LV+ D+ +D
Sbjct: 1014 ASGSDDCTIRLWD--LQAYRCINVLEGHTAR--IGPIAFSPEGNLLVSPSL-DQTLKVWD 1068
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+R + + GH V F D TL +A D +K+W+V+ + + T GH N
Sbjct: 1069 MRTG-ECLRTLQGHSSWVMAASFSPDGQTLASASCDQTVKIWDVSTGQCLTTLSGHSNWI 1127
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
V S + G LL SE + ++D+ G
Sbjct: 1128 WSVAFS--QDGLLLASASEDETIRLWDLGSG 1156
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 65/296 (21%), Positives = 121/296 (40%), Gaps = 38/296 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-----VLVDHP---------------VV 81
S+ + + F P A+GG +I+I++I++ L DH V
Sbjct: 704 SNGLLAVHFSPDGQRLASGGYDTQIKIWDIETGSCLYTLTDHENWIGAANFSSNGAMLVS 763
Query: 82 AVVDHS-KVCDY--YICTPAKLSSLKW----KPGTSGRVLGSGDYDGVVMEYDLEKKVPI 134
A D + ++ D Y C W R++ S D + +D+E +
Sbjct: 764 ASCDGTVRIWDTQNYQCLEVLRGHTGWVWRAVWSRDDRLIASCSADRTLRIWDVETGTCL 823
Query: 135 FERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCC 194
H ++W + +S +L AS S+D T+++W + G+C++ +Q + +
Sbjct: 824 HTLKGH-DHQIWGIAFSPDHQML-ASASEDQTIRLW--QVSNGQCMARIQ--GYTNWIKA 877
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-D 253
V F P L+A+G D+ +D R + + G + + + F T + G+ D
Sbjct: 878 VAFSP-NDQLLASGHRDRSLRIWD-RHRGECIRQLSGFAEGLPAVAFHPNSTTIAGGSQD 935
Query: 254 GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+KLW++ T+ GH + L+ G LL S + V ++D+ E
Sbjct: 936 ATIKLWDLKTGECSHTFTGHTD--EVWSLAFSPDGQLLASSSFDHTVKLWDLNLNE 989
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 27/232 (11%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG--RRVWSVDYSKGDPVLGASGSDDGTM 167
+G+ L + D +G V + L + + H RRV D L AS SDDGT+
Sbjct: 589 NGQTLATADTNGGVHLWQLVDQQRLLTLKGHTNWIRRV----VFSPDGQLLASASDDGTV 644
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC-ADKKAYAYDVRKMVDPV 226
++W + G+C+ T+ S S + V F P GS L + G A+ K + +++
Sbjct: 645 RIW--QLSSGQCLHTL--SISTGSEYAVAFSPDGSLLASCGIDANIKIWLVSEGRLLK-- 698
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
V GH + + F D L + G D +K+W++ + T H N++G + +
Sbjct: 699 -VLTGHSNGLLAVHFSPDGQRLASGGYDTQIKIWDIETGSCLYTLTDH---ENWIGAANF 754
Query: 286 -RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRR 336
+G +L S V ++D + +++ + G+V W R
Sbjct: 755 SSNGAMLVSASCDGTVRIWDTQ--------NYQCLEVLRGHTGWVWRAVWSR 798
>gi|356513987|ref|XP_003525689.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Glycine max]
Length = 533
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H + SV + + VL A+G+ GT+++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSSG-IDSVSFDSSE-VLVAAGAASGTIKL 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ ++ RS V+FHPFG A+G D +D+RK + +
Sbjct: 86 WD--LEEAKIVRTL--TSHRSNCTSVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHTY 139
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V IRF D +V+ G D +KLW++ +++ +K H + +
Sbjct: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQVQCIDFH--PNE 197
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS V +D+ FE + +AG E V S+ + G TL+ G
Sbjct: 198 FLLATGSADRTVKFWDLE--------TFELIGSAGPETTGVRSLTFSPDGR---TLLCGL 246
Query: 349 SDGL 352
+ L
Sbjct: 247 HESL 250
>gi|443915493|gb|ELU36919.1| Pfs, NACHT and WD domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 730
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 87/187 (46%), Gaps = 20/187 (10%)
Query: 91 DYYICTPAKL----SSLKWKPG--------TSGRVLGSGDYDGVVMEYDLEKKVPIFERD 138
D YIC ++ S LK G + G L SG D V +D++ P+
Sbjct: 153 DVYICALGQVISSHSPLKSHTGWVNSVTFSSDGLHLVSGSDDKTVQVWDVQTGQPVGMTF 212
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEF 197
E VWSV + D + ASGS D T+++WDP+ G+ V + P S AVCCV F
Sbjct: 213 EGHAAEVWSVCFGATDSHI-ASGSLDKTIRVWDPQT--GETV--LGPLTGHSNAVCCVAF 267
Query: 198 HPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCL 256
P G + +A+G DK Y+ R + +GH + + F D L + DG +
Sbjct: 268 SPNG-AFIASGSTDKTIRVYETRTGQTVLGPLEGHAGYIYSVIFSPDSTRLFSCSADGTV 326
Query: 257 KLWNVND 263
++WNV D
Sbjct: 327 RIWNVQD 333
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 174 CDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
C G+ +S+ P S + V V F G LV+ G DK +DV+ + F+GH
Sbjct: 157 CALGQVISSHSPLKSHTGWVNSVTFSSDGLHLVS-GSDDKTVQVWDVQTGQPVGMTFEGH 215
Query: 233 RKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSR-VIRTYKGHVNNRNFVGLSVWRHGGL 290
V + F D+ + +G+ D +++W+ V+ GH N V S +G
Sbjct: 216 AAEVWSVCFGATDSHIASGSLDKTIRVWDPQTGETVLGPLTGHSNAVCCVAFS--PNGAF 273
Query: 291 LGCGSETNQVFVYDVRWGEPV 311
+ GS + VY+ R G+ V
Sbjct: 274 IASGSTDKTIRVYETRTGQTV 294
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 19/208 (9%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHG-----GRRVWSVDYSKGDPVLGASGSDDGT 166
R + SG YD + +D + +D HG G V V +S D + SGS D T
Sbjct: 403 RYIASGSYDSTLRIWD-----GLTGKDMHGPMKGHGDWVNCVRFSP-DSTVVVSGSSDRT 456
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD + G+ V+ Q ++ V P G +V D K D V
Sbjct: 457 VRIWD--VNTGQQVT--QLFEGDLSIRSVGISPDGHRIV-CDSDDGKIVVLDRHSGTTVV 511
Query: 227 LVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSR--VIRTYKGHVNNRNFVGLS 283
D H+ V + F LD LV+ D + +W+ + V+ G + + +S
Sbjct: 512 GPIDAHKDYVRSVEFSLDAMRLVSGSNDKSVGIWDAETGKQLVVCGESGDAHGDYVLSVS 571
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+G + GS V V+D + G+PV
Sbjct: 572 FSPNGLYVASGSRDRTVRVWDSQNGKPV 599
>gi|384252005|gb|EIE25482.1| WD40 repeat-like protein [Coccomyxa subellipsoidea C-169]
Length = 454
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ LG+ +D +DLE + E++ H R V++V + +GD L ASG D ++W
Sbjct: 264 GQHLGTASFDQTWRLWDLETGDCLLEQEGHS-RSVYTVAF-QGDGALAASGGLDAIGRLW 321
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R G + ++ + ++F P G LV+ G D A +D+RK +
Sbjct: 322 DLRS--GNSIMVLEGHVR--GILSMDFSPNGYQLVS-GSEDHTAKVWDLRKR-KALYTLP 375
Query: 231 GHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GH V+ +R+ D L+TAG D KLW+ ++ ++I T GH
Sbjct: 376 GHTSLVSQVRYEPCDGYYLLTAGYDNTAKLWSSDNFKLIATLAGH 420
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+G D T ++W GK + T+ A R + V HP G L A D+ +D+
Sbjct: 228 TGGVDTTARLWSA---SGKQLRTLAGHADR--LGRVAVHPMGQHLGTASF-DQTWRLWDL 281
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D +L +GH ++V + F D + G D +LW++ I +GHV R
Sbjct: 282 -ETGDCLLEQEGHSRSVYTVAFQGDGALAASGGLDAIGRLWDLRSGNSIMVLEGHV--RG 338
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ + +G L GSE + V+D+R
Sbjct: 339 ILSMDFSPNGYQLVSGSEDHTAKVWDLR 366
>gi|19075402|ref|NP_587902.1| transcription initiation factor TFIID subunit 5
[Schizosaccharomyces pombe 972h-]
gi|26400378|sp|O13282.1|TAF5_SCHPO RecName: Full=Transcription initiation factor TFIID subunit 5;
AltName: Full=Transcription initiation factor TFIID 72
kDa subunit; Short=TAFII-72
gi|2385410|dbj|BAA22162.1| TFIID subunit taf72p [Schizosaccharomyces pombe]
gi|3859081|emb|CAA21958.1| SAGA complex subunit/TATA-binding protein associated
factor/transcription factor TFIID complex subunit Taf5
[Schizosaccharomyces pombe]
Length = 643
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 16/275 (5%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
++++ EF P ++ A G IR+++IK+ P V+ S + +
Sbjct: 323 TNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPV 382
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
+ P + L S D + ++ K + H G VW V + A+
Sbjct: 383 YGTTFSP--DNKYLLSCSEDASARLWSVDTKTALVAYKGHTGP-VWDVAFGPFGHYF-AT 438
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D T Q+W CD + + S V CV FHP S+ V G +DK +DV
Sbjct: 439 ASHDQTAQLWS--CDHIYPLRVF--AGHLSDVDCVTFHP-NSAYVLTGSSDKTCRLWDVH 493
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ V VF+GH + VT + D T+ +A ++G + LW++ R I+T +GH N
Sbjct: 494 RG-HSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGH--RGNI 550
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDV---RWGEPV 311
LS R +L G V +DV + PV
Sbjct: 551 YSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPV 585
>gi|353234895|emb|CCA66915.1| related to WD40-repeat protein (notchless protein) [Piriformospora
indica DSM 11827]
Length = 1471
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 28/209 (13%)
Query: 121 GVVMEYDLEKKVPIFERDEHGGRRVWS---------------VDYSKGDPVLGASGSDDG 165
V M+Y E++ P R GG R WS V +S D + SGS+D
Sbjct: 766 AVKMQY--ERRYPNTLRVTAGGYRSWSPVIKTICGHIGAVKSVAFSP-DGLRIVSGSNDK 822
Query: 166 TMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++WD D G+ V QP SAVC V F P G +V+A D+ +DV
Sbjct: 823 TVRLWD--ADTGRHVG--QPLEGHTSAVCSVAFSPNGQRIVSAS-QDQTIRLWDVDTGGQ 877
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVI-RTYKGHVNNRNFVGL 282
L F+GH K+V + F D +V+ D ++LW+V+ + I KGH + V
Sbjct: 878 IGLPFEGHTKSVNSVAFSPDSRRIVSGSHDNTVRLWDVDTGKQIGHPLKGHTGSVCSVAF 937
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S +G L+ GS + +++ GEP+
Sbjct: 938 S--PNGSLIASGSHDKTIRLWNAETGEPI 964
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 24/275 (8%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYIC 95
P + S+ + F P+ S+ A+G + IR++N ++ P+ + + H + + +
Sbjct: 924 PLKGHTGSVCSVAFSPNGSLIASGSHDKTIRLWNAET---GEPIRSPFEGHVESVNSVMF 980
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
+P L R++ SG D V +++ I + SV +S+ D
Sbjct: 981 SPDGL-----------RII-SGSDDRTVQLWNVATGKSIASSPRGDSWSLKSVAFSQ-DG 1027
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
+ SGSDD T+ WD + G + + + V V F P G +V+ G D
Sbjct: 1028 LRIVSGSDDKTVYFWDAKT-GRQAGAPFR--GHTKGVNSVAFSPDGCRIVS-GSDDSTLR 1083
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
++V + F GH K I F D +V+ T G ++LW++ SR I KGH
Sbjct: 1084 LWNVETSTEDGFKFSGHTKGFNSIGFSPDGRIVVSGSTTGAVRLWDLEKSRKIAPLKGHT 1143
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ S+ G + GS+ + +++ + GE
Sbjct: 1144 MSVKSAAFSL--DGLQVVSGSDDKTIQLWNAKTGE 1176
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SGSDD T+++WD + K + +P + +V V F P G +V+A D+ +D
Sbjct: 1288 SGSDDNTVRLWD--VETSKAIG--RPLHGHNWSVNSVAFSPNGRHIVSASF-DRTVRLWD 1342
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+ L F+GH +V + F D +++ D ++LW+V
Sbjct: 1343 AETGMQIGLPFEGHTCSVNSVAFSPDGRQIISGSDDETVRLWDV 1386
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 97/275 (35%), Gaps = 66/275 (24%)
Query: 36 SPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYIC 95
+P + + + F P +G +R++N+++ D H+K
Sbjct: 1052 APFRGHTKGVNSVAFSPDGCRIVSGSDDSTLRLWNVETSTEDG--FKFSGHTK------- 1102
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
+S+ + P GR++ SG G V +DLEK I H V S +S D
Sbjct: 1103 ---GFNSIGFSP--DGRIVVSGSTTGAVRLWDLEKSRKIAPLKGHT-MSVKSAAFSL-DG 1155
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
+ SGSDD T+Q+W+ +
Sbjct: 1156 LQVVSGSDDKTIQLWNAKTG---------------------------------------- 1175
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
M P F+GH+K V + F D +V+ D + LW+ R KGH
Sbjct: 1176 ----EHMGKP---FEGHQKGVNSVAFSPDGRRIVSGSQDKTILLWSATSGRRGPPLKGHT 1228
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
N V S G + GS+ V + VR G+
Sbjct: 1229 GGINSVAFS--PDGLRIVSGSDDKTVRFWHVRTGK 1261
>gi|307206419|gb|EFN84457.1| Katanin p80 WD40-containing subunit B1 [Harpegnathos saltator]
Length = 874
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 11/197 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRVL +G D V + + K+ I H + V + + + ++ A GS G +++
Sbjct: 30 SGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTP-IECVRFGQTEDLVCA-GSQTGALKI 87
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K T+ + +S + C++FHP+G L+A+G D +D+R+ + +
Sbjct: 88 WD--LEHAKLARTL--TGHKSGIRCMDFHPYGE-LLASGSLDTAIKLWDIRRK-GCIFTY 141
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH +TV ++F D + +AG +G +KLW++ R +R + H + + + H
Sbjct: 142 KGHNRTVNSLKFSPDGQWIASAGEEGMVKLWDLKAGRQLREFSEHRG--SAITVEFHPHE 199
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V +D+
Sbjct: 200 FLLASGSVDRTVHFWDL 216
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSL 103
I ++F P + A+G + I++++I+ K C + Y ++SL
Sbjct: 106 IRCMDFHPYGELLASGSLDTAIKLWDIRR--------------KGCIFTYKGHNRTVNSL 151
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
K+ P G+ + S +G+V +DL+ + E EH G + +V++ + +L ASGS
Sbjct: 152 KFSP--DGQWIASAGEEGMVKLWDLKAGRQLREFSEHRGSAI-TVEFHPHEFLL-ASGSV 207
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+ WD + + VS+ + S S SA+ C+ F G L A K Y ++ + +
Sbjct: 208 DRTVHFWD--LESFQLVSSTEQSHS-SAIRCLYFSQGGECLFAGSHDVLKVYGWEPGRTL 264
Query: 224 DPV 226
D +
Sbjct: 265 DTI 267
>gi|452818863|gb|EME26020.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
Length = 605
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 22/288 (7%)
Query: 71 IKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEK 130
IK++L D+ + + K C ++ + + +++ G SG L SG D ++ +D E
Sbjct: 275 IKTLLEDYHCFVLPNREKQC--FVGHQSNVKCVQF-VGESGAHLVSGSSDNTLILWDTES 331
Query: 131 KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS 190
+ H R +W +D ++G + ASG DGT+++WD + D TV +R
Sbjct: 332 GEKVASFIGHTSR-IWDIDVTRGGFIASASG--DGTVRIWDAKSDIRSSCRTVISGHTRD 388
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTA 250
V V +HP + LV G DK DVR + F GH +++ F L+ +
Sbjct: 389 -VYTVSYHPRENHLVTGG-YDKSLRLVDVRTG-QTIKTFTGHEASISKAVFNPHGNLIIS 445
Query: 251 GT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
G+ D +K W+V ++T H+ V + L +N+ ++D+R
Sbjct: 446 GSKDSTIKFWDVISGVCVKTLSSHLGEVTAVETNASGSLLLSSSKDNSNR--LWDIRMAR 503
Query: 310 PVWVHDFEPVTAAGSER-GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
P T+ R GF G +E +V G DG ++++
Sbjct: 504 PTRRFKGHQNTSKNFIRVGF---------GTNEELVVGGSEDGFVYIW 542
>gi|167527440|ref|XP_001748052.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773470|gb|EDQ87109.1| predicted protein [Monosiga brevicollis MX1]
Length = 3670
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 24/244 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ ++F P ++ A+G R I+I++I+ + + H+ A ++ ++
Sbjct: 18 VSSVDFHPQLNILASGSWDRSIKIWDIEESQILRTIDRNAGHT----------APVTCVR 67
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSD 163
W P SG +L S D +D+ + EH G W + S D A+ S
Sbjct: 68 WHP--SGNLLASTSADNTTCLWDVNTGQRMRTLREHFG---WVLSCSFAPDRTKLATASW 122
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG--SSLVAAGCADKKAYAYDVRK 221
D T+++WDP + G+ +ST++ C EF+P G S+L+A D A +D R
Sbjct: 123 DKTVRLWDP--NTGELLSTLRGHTKGVYAC--EFYPVGHTSALLATAGDDAIAQLWDTRT 178
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDS-RVIRTYKGHVNNRNF 279
+ + GH + I + + TL+ T G D + LW+ + + ++ +KGH
Sbjct: 179 RKVAMKLVGGHADAIHSIAWSNDGTLIATGGADKTVTLWDPKAAGKTLKLFKGHEETVKA 238
Query: 280 VGLS 283
VG +
Sbjct: 239 VGFA 242
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGS 202
+V SVD+ +L ASGS D ++++WD + + + T+ +A +A V CV +HP G+
Sbjct: 17 QVSSVDFHPQLNIL-ASGSWDRSIKIWD--IEESQILRTIDRNAGHTAPVTCVRWHPSGN 73
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
L+A+ AD +DV + H V F D L TA D ++LW+
Sbjct: 74 -LLASTSADNTTCLWDVNTG-QRMRTLREHFGWVLSCSFAPDRTKLATASWDKTVRLWDP 131
Query: 262 NDSRVIRTYKGH 273
N ++ T +GH
Sbjct: 132 NTGELLSTLRGH 143
>gi|427710343|ref|YP_007052720.1| serine/threonine protein kinase with WD40 repeats [Nostoc sp. PCC
7107]
gi|427362848|gb|AFY45570.1| serine/threonine protein kinase with WD40 repeats [Nostoc sp. PCC
7107]
Length = 681
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 27/270 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIA-RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
+ S+ + P A+ G R I+++NI + ++ + HS+ + +P
Sbjct: 397 AKSVVSVAISPDGQTIASSGEGERNIKMWNIAT---GKEILTLNGHSQKVNAVAISP--- 450
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
+G+ L SG D + ++L ++ H + ++ S +L S
Sbjct: 451 ---------NGKTLVSGSDDQTIKAWNLSTGKIVYSLTGHTDS-IQALAISPNGKIL-VS 499
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDD T++MW+ GK + T++ + V V P G +L A+G DK + +
Sbjct: 500 GSDDNTLKMWN--LGTGKLIRTLK--GHKYWVRSVAISPDGRNL-ASGSFDKTIKLWHLY 554
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ DP G+ T+T + F D TL +A D +KLW+V VIRT GH N
Sbjct: 555 QD-DPARTLTGNPNTITSVAFSPDSTTLASASRDRTIKLWDVASGEVIRTLTGHANTVTC 613
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G L S + ++++ GE
Sbjct: 614 VAFS--PDGMTLASASRDRTIKLWNLATGE 641
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 30/267 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + P+ +G + I+ +N+ + + V ++ H+ +P
Sbjct: 440 SQKVNAVAISPNGKTLVSGSDDQTIKAWNLSTGKI---VYSLTGHTDSIQALAISP---- 492
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
+G++L SG D + ++L I H + W SV S L A
Sbjct: 493 --------NGKILVSGSDDNTLKMWNLGTGKLIRTLKGH---KYWVRSVAISPDGRNL-A 540
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++W D T P+ + V F P S+ +A+ D+ +DV
Sbjct: 541 SGSFDKTIKLWHLYQDDPARTLTGNPNT----ITSVAFSP-DSTTLASASRDRTIKLWDV 595
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + GH TVT + F D TL +A D +KLWN+ V+ T GH +
Sbjct: 596 ASG-EVIRTLTGHANTVTCVAFSPDGMTLASASRDRTIKLWNLATGEVLNTLTGHADTVT 654
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDV 305
VG + G + GSE N + V+ +
Sbjct: 655 SVGFTA--DGKTIISGSEDNTIKVWRI 679
>gi|145475009|ref|XP_001423527.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390587|emb|CAK56129.1| unnamed protein product [Paramecium tetraurelia]
Length = 481
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 31/252 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+++ + F P+ ++ A+G + IR ++IK+ + H + +
Sbjct: 43 SETVMSVNFSPTGNILASGSADKSIRFWDIKT---GQQKCKLDGHLGI----------VY 89
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G +L SG D + +D++ I + H G V+SV++S L ASG
Sbjct: 90 SINFSP--DGNILASGSDDKSIHLWDVKTGQQIAKLYGHSG-WVYSVNFSPDSTTL-ASG 145
Query: 162 SDDGTMQMWDPR--CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SDD ++ +WD + K V ++ V V F P G++L A+G ADK +DV
Sbjct: 146 SDDNSINLWDVKTGLQKDKLVGHLE------RVWSVNFSPDGTTL-ASGSADKSIRLWDV 198
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH---VN 275
+ DGH V + F D TL + D ++LW++ + I GH V
Sbjct: 199 KTRQQKA-KLDGHSHCVISVNFSPDGATLASGSVDNTIRLWDIKTRQKIAKLDGHSSYVY 257
Query: 276 NRNFVGLSVWRH 287
NF+ L++ +H
Sbjct: 258 QVNFLLLALHQH 269
>gi|158339559|ref|YP_001520948.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158309800|gb|ABW31416.1| WD-repeat protein [Acaryochloris marina MBIC11017]
Length = 1215
Score = 68.6 bits (166), Expect = 5e-09, Method: Composition-based stats.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 24/231 (10%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G +L +GD + V + + P+ H V +V ++ +L ASGSD+ T+
Sbjct: 565 SDGELLATGDTNCDVGVWSVANGQPLHTLQGHSDW-VRTVAFNSESTLL-ASGSDEYTIM 622
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + G+ + T+ SA + VC V F P G +L+++ D +DV + + +
Sbjct: 623 LWDLK--QGQHLRTL--SAHQGQVCTVMFSPDGHTLISSS-QDLTLRLWDVYTG-ECLRI 676
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
F+GH + + ++F +D L++ G D LKLW+V + ++T GH N V S
Sbjct: 677 FEGHTQPIWSVQFSMDGQHLISGGEDNVLKLWDVATGKCLKTLIGHHNWIWSVAYS--PD 734
Query: 288 GGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP---VTAAGSE 325
G + GS N V V++V G +W F P + A+GSE
Sbjct: 735 GQRVASGSHDNTVKVWNVSSGSCIHTLRGHTNWIWSVAFNPQGNIIASGSE 785
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 52/254 (20%)
Query: 111 GRVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKGDPVLG---------- 158
G ++ SG D V +D+ + I + +H R+WSV +S P++
Sbjct: 777 GNIIASGSEDQTVRLWDVYSGHCLKILDGHDH---RIWSVTFSP-QPLMSMLSSEKLSRQ 832
Query: 159 ----ASGSDDGTMQMWDPR-CDGGKCVSTVQPSASR--------------SAVCCVEFHP 199
ASGS+D T+++WD + G +T +P + V V F P
Sbjct: 833 QALLASGSEDQTVRLWDVSWLESGTSEATSKPQSVHVLTSQCLQTLQGHTQQVWTVAFSP 892
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKL 258
G ++V++G D++ + GH + VT + F D L + G D ++L
Sbjct: 893 DGKTIVSSG--DEQFLRFWDVATGTCYKTLKGHPRRVTSVVFSPDGKLLASCGEDQTIRL 950
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETNQVFVYDVRWGE-------- 309
W+ + ++ KGH + +V+ G LL G + ++DV+ G+
Sbjct: 951 WDAQKGQCLKILKGHTKQ---LWTTVFNADGSLLASGGGDQTIRLWDVQTGQCLKVLEGH 1007
Query: 310 --PVWVHDFEPVTA 321
VW DF P A
Sbjct: 1008 DSCVWSLDFSPTDA 1021
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 60/250 (24%), Positives = 113/250 (45%), Gaps = 35/250 (14%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F+ S+ A+GG + IR++++++ + V++ C + SL + P T
Sbjct: 974 FNADGSLLASGGGDQTIRLWDVQT----GQCLKVLEGHDSCVW---------SLDFSP-T 1019
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD-DGTMQ 168
+L S YD + +D+E+ ++H G V S+ +S GD SGS D T++
Sbjct: 1020 DATLLASASYDQTLKLWDIEEGKCFNTLEDHEGA-VQSIAFS-GDGTQLVSGSMFDQTVR 1077
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS-------LVAAGCADKKAYAYDVRK 221
+W G+C+ + + + V F P S+ ++A G D++ + K
Sbjct: 1078 LWSTAT--GECLQVLPQQIAMA----VAFSPTSSNSSARDELMIAIGGGDQRLTIWHPNK 1131
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+F H++ + + F D T VT D KLWN +I+T++ ++R +
Sbjct: 1132 GTHQPQLF-AHQRMIMDLAFSPDGTTFVTGSWDETAKLWNATTGELIKTFR---SDRPYE 1187
Query: 281 GLSVWRHGGL 290
G+++ GL
Sbjct: 1188 GMNITGVAGL 1197
Score = 46.2 bits (108), Expect = 0.025, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 38/238 (15%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ + SG +D V +++ I H +WSV ++ ++ ASG
Sbjct: 728 SVAYSP--DGQRVASGSHDNTVKVWNVSSGSCIHTLRGHTNW-IWSVAFNPQGNII-ASG 783
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS-----------SLVAAGCA 210
S+D T+++WD G C+ + R P S +L+A+G
Sbjct: 784 SEDQTVRLWD--VYSGHCLKILDGHDHRIWSVTFSPQPLMSMLSSEKLSRQQALLASGSE 841
Query: 211 DKKAYAYDV--------RKMVDPVLV----------FDGHRKTVTYIRFL-DVDTLVTAG 251
D+ +DV P V GH + V + F D T+V++G
Sbjct: 842 DQTVRLWDVSWLESGTSEATSKPQSVHVLTSQCLQTLQGHTQQVWTVAFSPDGKTIVSSG 901
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ L+ W+V +T KGH R + G LL E + ++D + G+
Sbjct: 902 DEQFLRFWDVATGTCYKTLKGH--PRRVTSVVFSPDGKLLASCGEDQTIRLWDAQKGQ 957
>gi|452818864|gb|EME26021.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 597
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 22/288 (7%)
Query: 71 IKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEK 130
IK++L D+ + + K C ++ + + +++ G SG L SG D ++ +D E
Sbjct: 275 IKTLLEDYHCFVLPNREKQC--FVGHQSNVKCVQF-VGESGAHLVSGSSDNTLILWDTES 331
Query: 131 KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS 190
+ H R +W +D ++G + ASG DGT+++WD + D TV +R
Sbjct: 332 GEKVASFIGHTSR-IWDIDVTRGGFIASASG--DGTVRIWDAKSDIRSSCRTVISGHTRD 388
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTA 250
V V +HP + LV G DK DVR + F GH +++ F L+ +
Sbjct: 389 -VYTVSYHPRENHLVTGG-YDKSLRLVDVRTG-QTIKTFTGHEASISKAVFNPHGNLIIS 445
Query: 251 GT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
G+ D +K W+V ++T H+ V + L +N+ ++D+R
Sbjct: 446 GSKDSTIKFWDVISGVCVKTLSSHLGEVTAVETNASGSLLLSSSKDNSNR--LWDIRMAR 503
Query: 310 PVWVHDFEPVTAAGSER-GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
P T+ R GF G +E +V G DG ++++
Sbjct: 504 PTRRFKGHQNTSKNFIRVGF---------GTNEELVVGGSEDGFVYIW 542
>gi|434407864|ref|YP_007150749.1| hypothetical protein Cylst_6098 [Cylindrospermum stagnale PCC 7417]
gi|428262119|gb|AFZ28069.1| hypothetical protein Cylst_6098 [Cylindrospermum stagnale PCC 7417]
Length = 750
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 121/276 (43%), Gaps = 34/276 (12%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPA 98
A SDS+ + F P A+GG I+++N+ + + + HS+
Sbjct: 378 AGHSDSVYSVAFSPDGQTLASGGGDETIKLWNVTT---GQLLQTLSGHSE---------- 424
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPV 156
+ S+ + P G+ L SG D + +++ P+ G +W SV +S
Sbjct: 425 SVRSVAFSP--DGQTLASGSRDNTIKLWNVTTGKPL---QTLSGHSIWVSSVAFSPDGQT 479
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASG D T+++W+ GK + T S V V + P G +L A+G DK
Sbjct: 480 L-ASGGGDETIKLWN--VTTGKLLQTF--SGHSDLVESVVYSPDGQTL-ASGSRDKTIKL 533
Query: 217 YDVR--KMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
++V K++ GH + V + F D TL + D +KLWNV ++++T GH
Sbjct: 534 WNVTTGKLLQ---TLSGHSRKVNCVAFSPDGQTLASVSDDNTIKLWNVITGKLLQTLPGH 590
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
N V S +G L GS + +++V G+
Sbjct: 591 YYWVNCVAFS--PNGKTLASGSREETIKLWNVTTGK 624
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 30/264 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+S+ + F P A+G I+++N+ + P+ + HS +S
Sbjct: 423 SESVRSVAFSPDGQTLASGSRDNTIKLWNVTT---GKPLQTLSGHS----------IWVS 469
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L SG D + +++ + H V SV YS L ASG
Sbjct: 470 SVAFSP--DGQTLASGGGDETIKLWNVTTGKLLQTFSGHS-DLVESVVYSPDGQTL-ASG 525
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVR 220
S D T+++W+ GK + T+ S V CV F P G +L + + K +
Sbjct: 526 SRDKTIKLWN--VTTGKLLQTL--SGHSRKVNCVAFSPDGQTLASVSDDNTIKLWNVITG 581
Query: 221 KMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
K++ GH V + F + TL + + +KLWNV ++++T GH N
Sbjct: 582 KLLQ---TLPGHYYWVNCVAFSPNGKTLASGSREETIKLWNVTTGKLLQTLPGHSLGVNA 638
Query: 280 VGLSVWRHGGLL--GCGSETNQVF 301
V S G +L GCG + +++
Sbjct: 639 VAFS--PDGQILASGCGDKNIKIW 660
>gi|449458795|ref|XP_004147132.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Cucumis sativus]
gi|449524677|ref|XP_004169348.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Cucumis sativus]
Length = 795
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 24/245 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEH-GGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G S D S+ VL A+G+ GT++
Sbjct: 28 SSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTSGIDSVSFDSSE---VLVAAGAASGTIK 84
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V+FHPFG A+G D +D+RK +
Sbjct: 85 LWD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 138
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V IRF D +V+ G D +KLW++ +++ +K H + H
Sbjct: 139 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQVQCIDFHP--H 196
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS V +D + FE + +AG E V + + G TL+ G
Sbjct: 197 EFLLATGSADKTVKFWD--------LETFELIGSAGPETSGVRCLTFNPDGR---TLLCG 245
Query: 348 GSDGL 352
+ L
Sbjct: 246 LHESL 250
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A SAV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKP-NAILSLTGHTSGIDSVSFDSSEV 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 R 306
R
Sbjct: 131 R 131
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 39/237 (16%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSLKWK 106
++F P FA+G + ++I++I+ K C + Y ++++++
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIR--------------KKGCIHTYKGHTRGVNAIRFT 152
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + SG D V +DL + + H G +V +D+ + +L A+GS D T
Sbjct: 153 P--DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG-QVQCIDFHPHEFLL-ATGSADKT 208
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
++ WD + + + + P S V C+ F+P G +L+ K +++ +P+
Sbjct: 209 VKFWD--LETFELIGSAGPET--SGVRCLTFNPDGRTLLCGLHESLKVFSW------EPI 258
Query: 227 LVFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
DG V + R D++ L + C+ +W V+ + RT VNN N
Sbjct: 259 RCHDGVE--VGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVD---ITRTEPYAVNNAN 310
>gi|158338566|ref|YP_001519743.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158308807|gb|ABW30424.1| WD-repeat protein [Acaryochloris marina MBIC11017]
Length = 1208
Score = 68.6 bits (166), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/240 (27%), Positives = 111/240 (46%), Gaps = 29/240 (12%)
Query: 111 GRVLGSGDYDGVVMEYDLE------KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G+ L +G + V+M +D++ + + IF+ ++ VWSV +S +L AS S+D
Sbjct: 601 GKRLATGHFANVIMLWDVQNPKQGSQAIGIFKSHQNN---VWSVAFSVDGSIL-ASASED 656
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W + D G+C+S + V V HP G L++AG D+ +D++ D
Sbjct: 657 QTIRLW--QVDTGQCLSIF--TGHTDCVRSVVMHPDGQRLISAG-EDRTWRIWDLQTG-D 710
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ GH + + I D TL +A D +K+W++ R +RT KGH + V S
Sbjct: 711 CLQTTPGHEQGIWEIALSPDGHTLASASHDATVKVWDLETGRCLRTLKGHTDWLRTVAFS 770
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWV----------HDFEPVTAAGSERGFVSSVC 333
G L G + ++ V G+ V V F P + + G S++C
Sbjct: 771 --DDGQWLVSGGCDRTLRIWKVSSGQCVQVLTPHTQAIFSASFLPNRSVVASAGLDSTIC 828
Score = 46.2 bits (108), Expect = 0.027, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 104/259 (40%), Gaps = 33/259 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P+ SV A+ G+ I I ++++ + ++ H + C P
Sbjct: 811 FLPNRSVVASAGLDSTICITDLETGICQRRLLG---HHSCINSVTCHP------------ 855
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G +L SG + ++ YDL + + S+ +S + SGS DG ++
Sbjct: 856 QGNLLASGGDEPMIRLYDLTTGQALQSWRAQVNSTL-SIRHSPDGQTI-VSGSTDGAIRF 913
Query: 170 WDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
W T Q V + FHP G L +AG D++ +DV + + V
Sbjct: 914 WQ------VATGTYQTYWQHQGWVYGLAFHPQGHLLASAG-NDQQIRIWDVATK-EVLQV 965
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV-GLSVWR 286
GH T+ + F D L + DG +LW+V ++++ GH FV GLS
Sbjct: 966 LPGHGATIASLAFSPDGQWLASGSWDGTWRLWDVAKGQMVQAIPGH-----FVSGLSWGP 1020
Query: 287 HGGLLGCGSETNQVFVYDV 305
+ GS V +YDV
Sbjct: 1021 DSQQIAIGSFDAHVQIYDV 1039
Score = 38.5 bits (88), Expect = 5.2, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 105/274 (38%), Gaps = 38/274 (13%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
FH A N++ WD + + A +I + F P A+G
Sbjct: 936 FHPQGHLLASAGNDQQIRIWDVATKEVLQVLPGHGA----TIASLAFSPDGQWLASGSWD 991
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
R++++ V A+ H +S L W P + +GS +D V
Sbjct: 992 GTWRLWDVAK---GQMVQAIPGHF------------VSGLSWGPDSQQIAIGS--FDAHV 1034
Query: 124 MEYDLEKKVPIFERDEH-GGRRVWSVDYSKGDPVLG---ASGSDDGTMQMWDPRCDGGKC 179
YD VP + G W+ Y P LG A+G D T+++WD D G+C
Sbjct: 1035 QIYD----VPSATLSQTLVGHPFWAW-YVAWSP-LGNRMATGGADQTLRIWD--VDSGEC 1086
Query: 180 VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI 239
+ + + V V F P G + VA+ D+ A + V + + GH T +
Sbjct: 1087 LHVL--TDHTDWVMGVAFSPDGQT-VASCSKDETARLWSV-ETGQCLAKLSGHPSWSTAV 1142
Query: 240 RFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
F D TLVT ++ L+ W+V T++
Sbjct: 1143 EFSPDGQTLVTGSSELELRFWDVQTGTCRETWRA 1176
>gi|434389555|ref|YP_007100166.1| WD40 repeat-containing protein [Chamaesiphon minutus PCC 6605]
gi|428020545|gb|AFY96639.1| WD40 repeat-containing protein [Chamaesiphon minutus PCC 6605]
Length = 1220
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 130/312 (41%), Gaps = 39/312 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I+F P + ATG + IR++ + S + H H+ + + ++++ P
Sbjct: 593 IDFSPDSQLAATGETSGDIRLWQVGSGELLHKSSG---HT----------SWVWAVRFSP 639
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GRVL S DG + +D+ + R R V S+D+ D L A+ D G M
Sbjct: 640 --DGRVLASASQDGTIRLWDV--RANRLMRVLQASRPVLSLDFHP-DGQLLATSDDAGAM 694
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+WD G ST +A V V F P G L+A G D +DV D
Sbjct: 695 SIWD--IASGTIESTC--AAHLQQVFSVRFSPDG-RLIATGSDDNTVKIWDV-ATGDLCG 748
Query: 228 VFDGHRKTVTYIRFLDV---------DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
H + V +RF V L T +DG +KLW++ ++ T G+ +
Sbjct: 749 RLTEHTRQVWTVRFSPVRGASPEENGQLLATGSSDGTIKLWDLTTVAIVATLPGYPDWMM 808
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
+ S G LL G+ TN V ++++ + + +D P TA + G S V +
Sbjct: 809 SIDFS--PDGRLLATGNSTNDVKIWEI---DRIRAND-APPTAIATLHGHTSLVSLLKFS 862
Query: 339 EDECTLVAGGSD 350
D LV GG D
Sbjct: 863 PDGKLLVTGGVD 874
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 78/361 (21%), Positives = 144/361 (39%), Gaps = 35/361 (9%)
Query: 3 NFHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGI 62
+FH Q A + + A WD T S+ AA + + F P + ATG
Sbjct: 677 DFHPDGQLLATSDDAGAMSIWDIASGTIESTC----AAHLQQVFSVRFSPDGRLIATGSD 732
Query: 63 ARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGV 122
++I+++ + + +H++ +P + +S P +G++L +G DG
Sbjct: 733 DNTVKIWDVAT---GDLCGRLTEHTRQVWTVRFSPVRGAS----PEENGQLLATGSSDGT 785
Query: 123 VMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP---RCDGGKC 179
+ +DL V I + S+D+S D L A+G+ +++W+ R +
Sbjct: 786 IKLWDL-TTVAIVATLPGYPDWMMSIDFSP-DGRLLATGNSTNDVKIWEIDRIRANDAPP 843
Query: 180 VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI 239
+ S V ++F P G LV G D+ + + + + I
Sbjct: 844 TAIATLHGHTSLVSLLKFSPDGKLLVTGG-VDRSIRWWSTTTWQELSRWVGYTNRIQSAI 902
Query: 240 RFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETN 298
D +V++ DG +++W+V ++R+ +GH + + + + H G + SE
Sbjct: 903 FTPDGTQIVSSSQDGIVRVWDVRTGDLVRSLRGH--DPGLILMVAYNPHSGSIASASEDR 960
Query: 299 QVFVYDVRWG----------EPVWVHDFEP---VTAAGSERGFVSSVCWRRVGEDECTLV 345
V ++D G + VW F P + A+G G V W GE TL+
Sbjct: 961 TVKIWDAATGDLVRTLAADRQAVWSVKFSPDGKLLASGCGEGRVR--FWTETGELAATLL 1018
Query: 346 A 346
Sbjct: 1019 G 1019
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Query: 197 FHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGC 255
F P G L A +DV V F GH + + I F D L T D
Sbjct: 1071 FSPNGRFLAVGAGVANVAQLWDV-PACQLVREFAGHTQDILAIEFSPDGRYLATGSADRT 1129
Query: 256 LKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+K+W V V++T GH++ N LS G ++ GS+ + V+D+ GE
Sbjct: 1130 IKIWEVETGTVLQTLIGHLDRVN--SLSYSPDGRIIVSGSDDETIKVWDLATGE 1181
>gi|428204279|ref|YP_007082868.1| WD40 repeat-containing protein [Pleurocapsa sp. PCC 7327]
gi|427981711|gb|AFY79311.1| WD40 repeat-containing protein [Pleurocapsa sp. PCC 7327]
Length = 578
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 26/266 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + I F P A+G + I+I+N+ ++ + + DH D+ +
Sbjct: 332 SAGVNAIAFSPDGQKLASGSEDKTIKIWNLTKNSLE---LTLTDH---LDWVM------- 378
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL + P G+ L SG D + ++L H G V SV +S L ASG
Sbjct: 379 SLAFSP--DGQRLASGSKDNAIAIWNLATGTLEATLSGHAGA-VQSVAFSPDGQRL-ASG 434
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD T+++W+ R G T++ A V V F P G L A+ DKK ++V
Sbjct: 435 SDDATVRIWNVRT--GSLEQTLEQHAQ--GVNNVVFSPDGQRL-ASASKDKKIRIWNV-S 488
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ +GH +V + F + LV+A D +K+WN+++ V RT +GH +
Sbjct: 489 IGKLEQTLNGHADSVNSVAFSPNGQQLVSASDDKTIKIWNLSNGSVERTLEGHSKAVKSI 548
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVR 306
S G L G N V ++ +
Sbjct: 549 AFS--PDGQELASGGLDNTVAIWQAK 572
>gi|359458127|ref|ZP_09246690.1| WD repeat-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 1193
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 17/172 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLE------KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G+ L +G + V+M +D++ + + IF+ ++ VWSV +S +L AS S+D
Sbjct: 586 GKRLATGHFANVIMLWDVQNPKQGSQAIGIFKGHQNN---VWSVAFSVDGSIL-ASASED 641
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W + D G+C+S + V V HP G L++AG D+ +D++ D
Sbjct: 642 QTIRLW--QVDTGQCLSIF--TGHTDCVRSVVMHPDGQRLISAG-EDRTWRIWDLQTG-D 695
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ GH + + I D TL +A D +KLW++ R +RT KGH +
Sbjct: 696 CLQSTPGHEQGIWEIALSPDGHTLASASHDATVKLWDLETGRCLRTLKGHTD 747
Score = 45.1 bits (105), Expect = 0.052, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 105/271 (38%), Gaps = 32/271 (11%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
FH A N++ WD + + A +I + F P A+G
Sbjct: 921 FHPQGHLLASAGNDQQIRLWDVATKEVLQVLPGHGA----TIASLAFSPDGQWLASGSWD 976
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
R++++ V A+ H +S L W P + +GS +D V
Sbjct: 977 GTWRLWDVAK---GQMVQAIPGHF------------VSGLSWSPNSQQIAIGS--FDAHV 1019
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSK-GDPVLGASGSDDGTMQMWDPRCDGGKCVST 182
YD+ H W V +S GD + A+G D T+++WD D G+C+
Sbjct: 1020 QIYDVPSATLSQTLVGHP-FWAWYVTWSPLGDRI--ATGGADQTLRIWD--VDSGECLHV 1074
Query: 183 VQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL 242
+ + V V F P G + VA+ D+ A + V + + GH VT + +
Sbjct: 1075 L--TDHTDWVMGVAFSPDGQT-VASCSKDETARLWSV-ETGQCLAKLSGHPSWVTAVEYS 1130
Query: 243 -DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
D TLVT +D L+ W+V T++
Sbjct: 1131 PDGQTLVTGSSDLELRFWDVQTGTCRETWRA 1161
>gi|145522898|ref|XP_001447293.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414793|emb|CAK79896.1| unnamed protein product [Paramecium tetraurelia]
Length = 2077
Score = 68.2 bits (165), Expect = 6e-09, Method: Composition-based stats.
Identities = 95/367 (25%), Positives = 159/367 (43%), Gaps = 54/367 (14%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A + +++ WD L + VS + P DS+ A+G R IR++NI
Sbjct: 1269 ASASEDKSIILWDVKLGQDMKKLKGHTEKVS----TLCIAPDDSILASGSFDRSIRLWNI 1324
Query: 72 KS-----VLVDH-----PVVAVVDHSKVCD-YYICT------PAKLSSLKW---KPGT-- 109
++ +L H + D + + Y C+ + L LK K G
Sbjct: 1325 ETGQQRFLLEGHNDFVQSLCFSPDGATLASGSYDCSLRLWDVKSGLEKLKLDGHKLGVYS 1384
Query: 110 -----SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G L SG D V+ + L+ + + + H G + SV +S L ASGS+D
Sbjct: 1385 VCFSPDGNTLASGSGDKVIRLWSLKTGLEKKKLEGHSG-CIQSVKFSPDGATL-ASGSED 1442
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
++++WD R K + + RS +C F P G +++A+G DK +D+R +
Sbjct: 1443 KSIRIWDIRLGQVKQIFEGHQNWIRS-IC---FSPDG-NILASGSQDKSIRIWDLRSGQE 1497
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ +GHR ++ + F D TL + G D + LW+V + + +G +N V S
Sbjct: 1498 RKRL-EGHRSWISTVCFSPDGTTLASGGGDQLICLWDVRSDKNNQKQQGKINWVFSVCFS 1556
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
G +L G+ N + ++D + G+ E G R +V S+C+ G T
Sbjct: 1557 --PDGTILASGNGDNSIRLWDAKSGQ-------EKNNLEG-HRSWVYSICFSPDG----T 1602
Query: 344 LVAGGSD 350
L+A GSD
Sbjct: 1603 LLASGSD 1609
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 118/270 (43%), Gaps = 30/270 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I + F P + A+GG + I +++++S + ++ + +C
Sbjct: 1508 ISTVCFSPDGTTLASGGGDQLICLWDVRSDKNNQKQQGKINWV----FSVC--------- 1554
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGS 162
+ P G +L SG+ D + +D + E++ G R W S+ +S D L ASGS
Sbjct: 1555 FSP--DGTILASGNGDNSIRLWDAKSGQ---EKNNLEGHRSWVYSICFSP-DGTLLASGS 1608
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD ++++WD + G+ + ++ C F P G++L A+G DK +D+ K+
Sbjct: 1609 DDKSIRLWD--VESGQQKNLLELHTQEIYSIC--FSPDGNTL-ASGGEDKSILLWDL-KL 1662
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ +G +V + F ++ +G D + LW+++ + +GH N
Sbjct: 1663 WKQKIKLEGINGSVLSVCFSPDGLILASGCGDNSILLWDMDSGQQKLKLEGH--NERVYS 1720
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ G +L S + ++ V GE +
Sbjct: 1721 VCFSSFGDILASSSHDQSIRLWRVASGEEI 1750
Score = 47.8 bits (112), Expect = 0.008, Method: Composition-based stats.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+S + + P ++ +L S YD + +D+ +K +D+ R S S L A
Sbjct: 1799 VSQINFSPDSN--LLVSSSYDKSIRLWDVSQK-----QDKKLQLRAISACLSPDGTTL-A 1850
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+G D +++WD + K ++ V V F P G+ ++A+G D Y +D
Sbjct: 1851 TGCLDKLIRLWDLKSGDQK----MKLIGHNQRVESVTFSPDGA-ILASGSFDASIYLWDT 1905
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
K + + +GH K+V ++F T++ +G+ DG L+LW+VN +G N
Sbjct: 1906 -KSGNLKIRINGHSKSVLSLQFSPKGTILASGSLDGSLRLWDVNSGSEKLKLRGLTNQVQ 1964
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDV 305
+ S G ++ G+ + ++D+
Sbjct: 1965 ILCFS--SDGTVVAQGALDKSINMWDI 1989
Score = 42.7 bits (99), Expect = 0.29, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
P + ATG + + IR++++KS + ++ H++ ++ S+ + P
Sbjct: 1842 LSPDGTTLATGCLDKLIRLWDLKS---GDQKMKLIGHNQ----------RVESVTFSP-- 1886
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G +L SG +D + +D + + H + V S+ +S +L ASGS DG++++
Sbjct: 1887 DGAILASGSFDASIYLWDTKSGNLKIRINGHS-KSVLSLQFSPKGTIL-ASGSLDGSLRL 1944
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
WD + G ++ ++ + C F G ++VA G DK +D+
Sbjct: 1945 WD--VNSGSEKLKLRGLTNQVQILC--FSSDG-TVVAQGALDKSINMWDI 1989
>gi|75910071|ref|YP_324367.1| WD-40 repeat-containing serine/threonine protein kinase [Anabaena
variabilis ATCC 29413]
gi|75703796|gb|ABA23472.1| serine/threonine protein kinase with WD40 repeats [Anabaena
variabilis ATCC 29413]
Length = 576
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 28/257 (10%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
W+ N + V+S S + AV+ + F P + AT + ++++++ + V
Sbjct: 313 WELNTQKLVASFSGHSQAVTS----VTFSPQGEILATASDDKTVKLWHLPT---SREVFT 365
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H+K P K S+ + P +G++L SG +D V +D+ I H
Sbjct: 366 LNGHTK--------PVK--SVSFSP--NGQILASGSWDKQVKLWDVTTGKEISALKAHQ- 412
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+V +V +S + +L AS S D T+++W + + S AV + F P G
Sbjct: 413 LQVSAVAFSPQEEIL-ASASFDRTIRLWQITQNHPRYTLLKTLSGHTRAVLAIAFSPDGK 471
Query: 203 SLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
++A G D +D+ +++D +LV H +V + F D TL++A D +KLW
Sbjct: 472 -ILATGSDDNTIKLWDINTGQLIDTLLV---HSWSVVAVTFTADNKTLISASWDKTIKLW 527
Query: 260 NVNDSRVIRTYKGHVNN 276
V+ + I T H+++
Sbjct: 528 KVSTTEEIVTLASHLDS 544
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 26/264 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG D ++ ++L + + H + V SV +S +L A+ SDD T+++W
Sbjct: 298 GNTLASGGDDKIIRLWELNTQKLVASFSGHS-QAVTSVTFSPQGEIL-ATASDDKTVKLW 355
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ V T+ + V V F P G ++A+G DK+ +DV + +
Sbjct: 356 --HLPTSREVFTL--NGHTKPVKSVSFSPNGQ-ILASGSWDKQVKLWDVTTGKE-ISALK 409
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSR----VIRTYKGHVNNRNFVGLSVW 285
H+ V+ + F + L +A D ++LW + + +++T GH R + ++
Sbjct: 410 AHQLQVSAVAFSPQEEILASASFDRTIRLWQITQNHPRYTLLKTLSGH--TRAVLAIAFS 467
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPV---WVHDFE--PVTAAGSERGFVSSV------CW 334
G +L GS+ N + ++D+ G+ + VH + VT + +S+ W
Sbjct: 468 PDGKILATGSDDNTIKLWDINTGQLIDTLLVHSWSVVAVTFTADNKTLISASWDKTIKLW 527
Query: 335 RRVGEDECTLVAGGSDGLLHVFVG 358
+ +E +A D + + V
Sbjct: 528 KVSTTEEIVTLASHLDSVCAIAVN 551
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 15/170 (8%)
Query: 147 SVD--YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
SVD + D V+ G + G + + P +C++T+ +++ P G++L
Sbjct: 246 SVDQRFQSADAVMQVMGIE-GKILHYPPPLSPWQCLNTLTGDYCTNSLA---ISPDGNTL 301
Query: 205 VAAGCADK--KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNV 261
A+G DK + + + +K+V F GH + VT + F + L TA D +KLW++
Sbjct: 302 -ASGGDDKIIRLWELNTQKLVAS---FSGHSQAVTSVTFSPQGEILATASDDKTVKLWHL 357
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
SR + T GH V S +G +L GS QV ++DV G+ +
Sbjct: 358 PTSREVFTLNGHTKPVKSVSFS--PNGQILASGSWDKQVKLWDVTTGKEI 405
>gi|168039874|ref|XP_001772421.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676218|gb|EDQ62703.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 637
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 144 RVWSV-DYSKGDPVLGASGSDDGTMQMWDPR-CDGGKCVSTVQPSASRSAVCCVEFHPFG 201
R+W V S GD + ASG D T++ W+ R + C +T+ + V V++H
Sbjct: 377 RIWDVTSSSSGDFIASASG--DSTVKFWNLRGSNKTPCSATL--AGHEGDVYSVKYHQ-S 431
Query: 202 SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWN 260
++ V G DK +D R V + F GH+ +V+ + F + LV +G+ D LK W+
Sbjct: 432 NNYVVTGGYDKTVKLWDARTGV-LLRTFSGHKSSVSRVIFNPLGNLVISGSKDSTLKFWD 490
Query: 261 VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT 320
+ ++TY H+ V ++ + G L GS+ N ++DVR P+ F+
Sbjct: 491 LVSGVCVKTYSSHLGEVTSVEMN--KAGSFLLSGSKDNSNRLWDVRLARPI--RRFKG-- 544
Query: 321 AAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ + FV + G DE +V G DG ++++
Sbjct: 545 HQNTSKNFVRA----SFGPDESLVVGGSEDGFVYIW 576
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 9/167 (5%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V+SV Y + + + +G D T+++WD R G + T S +S+V V F+P G+ L
Sbjct: 423 VYSVKYHQSNNYV-VTGGYDKTVKLWDART--GVLLRTF--SGHKSSVSRVIFNPLGN-L 476
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
V +G D +D+ V V + H VT + + + +G+ D +LW+V
Sbjct: 477 VISGSKDSTLKFWDLVSGV-CVKTYSSHLGEVTSVEMNKAGSFLLSGSKDNSNRLWDVRL 535
Query: 264 SRVIRTYKGHVN-NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+R IR +KGH N ++NFV S L+ GSE V+++D GE
Sbjct: 536 ARPIRRFKGHQNTSKNFVRASFGPDESLVVGGSEDGFVYIWDTATGE 582
>gi|166366565|ref|YP_001658838.1| WD repeat-containing protein [Microcystis aeruginosa NIES-843]
gi|166088938|dbj|BAG03646.1| WD-repeat protein [Microcystis aeruginosa NIES-843]
Length = 962
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 28/250 (11%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG +D + +++E I H G V SV++S L SGS D T+++W
Sbjct: 645 GKTLVSGSWDNTIKLWNVETGEEIRTLKGHNGP-VNSVNFSPDGKTL-VSGSGDKTIKLW 702
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ + G+ + T++ ++V V F P G +LV+ G D ++V + + +
Sbjct: 703 N--VETGQEIRTLK--GHDNSVISVNFSPDGKTLVS-GSGDNTIKLWNV-ETGEEIRTLK 756
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D TLV+ D +KLWNV + IRT KGH + F ++ G
Sbjct: 757 GHDSYVNSVNFSPDGKTLVSVSRDNTIKLWNVKTGKEIRTIKGH--DIYFRSVNFSPDGK 814
Query: 290 LLGCGSETNQVFVYDVRWGEPVWV---HDFEPVTAAGSERGFVSSVCWRRVGEDECTLVA 346
L GS + +++V G + HD+ FV+SV + D TLV+
Sbjct: 815 TLVSGSGDKTIKLWNVETGTEIRTLKGHDW-----------FVNSVNF---SPDGKTLVS 860
Query: 347 GGSDGLLHVF 356
G +D + ++
Sbjct: 861 GSNDNTIKLW 870
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 14/213 (6%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++S+ + P G+ L S D + +++E I H G V SV++S L
Sbjct: 595 VTSVNFSP--DGKTLVSVSRDNTIKLWNVETGEEIRTLKGHDG--VQSVNFSPDGKTL-V 649
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++W+ + G+ + T++ V V F P G +LV+ G DK ++V
Sbjct: 650 SGSWDNTIKLWN--VETGEEIRTLK--GHNGPVNSVNFSPDGKTLVS-GSGDKTIKLWNV 704
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + GH +V + F D TLV+ D +KLWNV IRT KGH + N
Sbjct: 705 -ETGQEIRTLKGHDNSVISVNFSPDGKTLVSGSGDNTIKLWNVETGEEIRTLKGHDSYVN 763
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V S G L S N + +++V+ G+ +
Sbjct: 764 SVNFS--PDGKTLVSVSRDNTIKLWNVKTGKEI 794
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 118/273 (43%), Gaps = 32/273 (11%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D + + F P +G I+++N+++ + + H+ ++S
Sbjct: 634 DGVQSVNFSPDGKTLVSGSWDNTIKLWNVET---GEEIRTLKGHN----------GPVNS 680
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P G+ L SG D + +++E I H V SV++S L SGS
Sbjct: 681 VNFSP--DGKTLVSGSGDKTIKLWNVETGQEIRTLKGHDN-SVISVNFSPDGKTL-VSGS 736
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+++W+ + G+ + T++ S V V F P G +LV+ D ++V K
Sbjct: 737 GDNTIKLWN--VETGEEIRTLK--GHDSYVNSVNFSPDGKTLVSV-SRDNTIKLWNV-KT 790
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH---VNNRN 278
+ GH + F D TLV+ D +KLWNV IRT KGH VN+ N
Sbjct: 791 GKEIRTIKGHDIYFRSVNFSPDGKTLVSGSGDKTIKLWNVETGTEIRTLKGHDWFVNSVN 850
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F G L GS N + +++V G+ +
Sbjct: 851 FSP-----DGKTLVSGSNDNTIKLWNVETGQEI 878
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P +G + I+++N+++ + + H + S+
Sbjct: 678 VNSVNFSPDGKTLVSGSGDKTIKLWNVET---GQEIRTLKGHDN----------SVISVN 724
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G+ L SG D + +++E I H V SV++S L S S D
Sbjct: 725 FSP--DGKTLVSGSGDNTIKLWNVETGEEIRTLKGHDSY-VNSVNFSPDGKTL-VSVSRD 780
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W+ + GK + T++ V F P G +LV+ G DK ++V +
Sbjct: 781 NTIKLWNVKT--GKEIRTIK--GHDIYFRSVNFSPDGKTLVS-GSGDKTIKLWNVETGTE 835
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ GH V + F D TLV+ D +KLWNV + IRT +GH
Sbjct: 836 -IRTLKGHDWFVNSVNFSPDGKTLVSGSNDNTIKLWNVETGQEIRTLRGH 884
>gi|427415971|ref|ZP_18906154.1| WD40 repeat-containing protein [Leptolyngbya sp. PCC 7375]
gi|425758684|gb|EKU99536.1| WD40 repeat-containing protein [Leptolyngbya sp. PCC 7375]
Length = 1274
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 144/330 (43%), Gaps = 25/330 (7%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WDF+L T +S S ++ V S+ + SD++ A+GG + + + + +
Sbjct: 847 WDFHLGTQISKSQIHDSRVW-SVAFYQHH-SDTLLASGGDDCSVVLSKVSTT--PNSWTH 902
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVL---GSGDYD-GVVMEYDLEKKVPIFERD 138
++ K+ + ++ L + TS L G D+ + + + PI
Sbjct: 903 SMEPLKILRGFARGSRSVAVLSYARQTSDLDLIVSGGNDWHIKLWQSFQEDPNTPIRNLA 962
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
H GR +W V AS SDDGT+++WD + G CV + + V V F+
Sbjct: 963 GHTGR-IWGV---TAHAEWVASASDDGTVRIWD--LESGSCVKVL--IGHQHWVRTVAFN 1014
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLK 257
P G+ ++A+G D++ Y + + + + + +GH+ + + F D L + G D +
Sbjct: 1015 PSGT-MLASGGDDRQIYLWQLPTGM-KLQLLEGHQHWIRTVAFSPDGKYLASGGDDKAIY 1072
Query: 258 LWNVNDSRVIRTYKGHVNNR-NFVGLSVWRHGG-----LLGCGSETNQVFVYDVRWGEPV 311
LW+V ++IR +K +R V + LL GS+ +V ++DV GE +
Sbjct: 1073 LWDVRKYKIIRKFKDRHQHRIRSVSFKPFPKSQSNPRLLLASGSDDGKVIIWDVEMGEYL 1132
Query: 312 WVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
+ E TA F CW G D+
Sbjct: 1133 HCFEDEHRTAGVKSVAFSPDSCWMASGSDD 1162
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 95/225 (42%), Gaps = 35/225 (15%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S ++ SGD D V +DLE + I H R V SV S +G SGSDDGT+ +
Sbjct: 790 SQYLVSSGD-DQTVRIWDLESQTCIRVLRGHTDR-VRSVAVSPDGCYVG-SGSDDGTVIL 846
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS-SLVAAGCADKKAYAYDVRKM------ 222
WD G +S Q SR V V F+ S +L+A+G D V
Sbjct: 847 WDFHL--GTQISKSQIHDSR--VWSVAFYQHHSDTLLASGGDDCSVVLSKVSTTPNSWTH 902
Query: 223 -VDPVLVFDGHRK------TVTYIRFL-DVDTLVTAGTDGCLKLWNV---NDSRVIRTYK 271
++P+ + G + ++Y R D+D +V+ G D +KLW + + IR
Sbjct: 903 SMEPLKILRGFARGSRSVAVLSYARQTSDLDLIVSGGNDWHIKLWQSFQEDPNTPIRNLA 962
Query: 272 GHVNNRNFVGLSVW---RHGGLLGCGSETNQVFVYDVRWGEPVWV 313
GH +W H + S+ V ++D+ G V V
Sbjct: 963 GHTGR-------IWGVTAHAEWVASASDDGTVRIWDLESGSCVKV 1000
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I + F P A+GG + I +++++ + H ++ S+
Sbjct: 1050 IRTVAFSPDGKYLASGGDDKAIYLWDVRKYKIIRKFKDRHQH------------RIRSVS 1097
Query: 105 WKPGTSGR-----VLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+KP + +L SG DG V+ +D+E + + FE DEH V SV +S D
Sbjct: 1098 FKPFPKSQSNPRLLLASGSDDGKVIIWDVEMGEYLHCFE-DEHRTAGVKSVAFSP-DSCW 1155
Query: 158 GASGSDDGTMQMWDPR 173
ASGSDD + +WD R
Sbjct: 1156 MASGSDDHRIYVWDTR 1171
>gi|145492580|ref|XP_001432287.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399398|emb|CAK64890.1| unnamed protein product [Paramecium tetraurelia]
Length = 1103
Score = 68.2 bits (165), Expect = 6e-09, Method: Composition-based stats.
Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 34/287 (11%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD +S N VS + F P S+ A+G + IR++N+ + + +
Sbjct: 470 WDVKTGQQISQFDGHNDVVSS----VCFSPDGSILASGSSDKSIRLWNVNT---EQQIAK 522
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ +HS+ ++ S+ + P G+ L SG D + +D + ++ + G
Sbjct: 523 LENHSR----------EVLSVCFSP--DGQTLASGSNDYTIRLWDFKTGQ---QKAQFNG 567
Query: 143 RRVW--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
+++ SV +S L ASGS D ++++WD + K Q RS VC F P
Sbjct: 568 HKMFVNSVCFSPDGTTL-ASGSADNSIRLWDVKTGQQKAKLENQNETVRS-VC---FSPD 622
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
G++L A+G DK +DV+ V + +GH V + F D TL + D ++LW
Sbjct: 623 GTTL-ASGHVDKSIRLWDVKSGYQKVKL-EGHNGVVQSVCFSPDGMTLASCSNDYSVRLW 680
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+V GH V S + L GS N + ++DV+
Sbjct: 681 DVKAGEQKAQLDGHSGQVQSVCFS--PNDNTLASGSSDNSIRLWDVK 725
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 93/384 (24%), Positives = 157/384 (40%), Gaps = 68/384 (17%)
Query: 19 ARCEWDFNLRTTVSSSSSPNAAVSDSIGVIE---FDPSDSVFATGGIARKIRIYNIKSVL 75
A C D+++R + A + G ++ F P+D+ A+G IR++++K+
Sbjct: 669 ASCSNDYSVRLWDVKAGEQKAQLDGHSGQVQSVCFSPNDNTLASGSSDNSIRLWDVKT-- 726
Query: 76 VDHPVVAVVDHSKVCDYYICTP--AKLSS---------LKWKPGTS-------------- 110
+ HS+ +P + L+S WK G
Sbjct: 727 -RQQKTKLDGHSQTVQSLCFSPDGSTLASGSLDDSILLWDWKTGQQKAKLDGHTNSVSSV 785
Query: 111 -----GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR-VWSVDYSKGDPVLGASGSDD 164
G +L SG D ++ +D+ K + + HG V SV +S L ASGS+D
Sbjct: 786 CFSPDGTLLASGSSDNQILIWDV--KTGVIKTKFHGHTYIVNSVCFSSDGKTL-ASGSND 842
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSA----VCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
T+++WD ++T Q A + V V F P +L A+G D+ +D
Sbjct: 843 KTIRLWD--------ITTGQQIAKLNGHTNLVIAVCFSPDHITL-ASGSHDQSILLWDY- 892
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
K DGH TV + F + TL + D ++LW+V + I+ GH +
Sbjct: 893 KTGKQRAKLDGHSDTVQSVCFSPNGLTLASCSHDQTIRLWDVQTGQQIKKLDGHDSYIRS 952
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
V S G +L GS + ++D + GE + G + +V +VC+
Sbjct: 953 VCFS--PDGTILASGSYDKSIRLWDAKTGE-------QKAKLVGHDT-WVQTVCF---SP 999
Query: 340 DECTLVAGGSDGLLHVFVGKKKPL 363
D TL +G +D + V+ KK+ +
Sbjct: 1000 DGMTLASGSTDQSIRVWDVKKRQI 1023
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D ++++WD + G+ +S Q V V F P G S++A+G +DK ++
Sbjct: 459 ASGSQDESIRLWDVKT--GQQIS--QFDGHNDVVSSVCFSPDG-SILASGSSDKSIRLWN 513
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
V + + H + V + F D TL + D ++LW+ + + GH
Sbjct: 514 VNTE-QQIAKLENHSREVLSVCFSPDGQTLASGSNDYTIRLWDFKTGQQKAQFNGHKMFV 572
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
N V S G L GS N + ++DV+ G+
Sbjct: 573 NSVCFS--PDGTTLASGSADNSIRLWDVKTGQ 602
Score = 40.0 bits (92), Expect = 1.8, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L SG +D ++ +D + + D H V SV +S L AS S D T+++WD +
Sbjct: 878 LASGSHDQSILLWDYKTGKQRAKLDGHSDT-VQSVCFSPNGLTL-ASCSHDQTIRLWDVQ 935
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
G+ + + S C F P G+ ++A+G DK +D + + GH
Sbjct: 936 T--GQQIKKLDGHDSYIRSVC--FSPDGT-ILASGSYDKSIRLWDAKTGEQKAKLV-GHD 989
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTY 270
V + F D TL + TD +++W+V +++ +Y
Sbjct: 990 TWVQTVCFSPDGMTLASGSTDQSIRVWDVKKRQILPSY 1027
>gi|428215818|ref|YP_007088962.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
gi|428004199|gb|AFY85042.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 415
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 30/266 (11%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
+I I D + A+G + I+++N+K+ ++ + HS Y LS
Sbjct: 133 AISAIALDAEGQLLASGSWDKTIKLWNLKT---GEEILTLTGHS-----YPVNSVALSYN 184
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
W L SG D V + E P+F + H + V +V +S D +L ASGS
Sbjct: 185 GW-------TLASGSNDKTVKLWQAETGQPLFTKTGH-QQWVNAVTFSP-DGILLASGSL 235
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRK 221
D T+++W +G V + +AV + P + ++A+G DK K + + +
Sbjct: 236 DQTIRLW----NGITGQELVTLTGHLAAVTSLAISP-NNRILASGSLDKTIKLWNIETSE 290
Query: 222 MVDPVLVFDGHRKTVTYI-RFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
P+L GH VT + F D TL + D +KLW++ I T GH N +
Sbjct: 291 EFPPLL---GHDDGVTSVGIFPDNLTLASGSLDKTIKLWDIKTGTEICTLTGHGERINSI 347
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVR 306
+S G +L S + + ++D+R
Sbjct: 348 AIS--PAGKMLVSASSDHTLKLWDLR 371
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P + A+G + + IR++N + +V + H A ++SL
Sbjct: 218 VNAVTFSPDGILLASGSLDQTIRLWN---GITGQELVTLTGHL----------AAVTSLA 264
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKK---VPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
P + R+L SG D + +++E P+ D+ V SV + L ASG
Sbjct: 265 ISP--NNRILASGSLDKTIKLWNIETSEEFPPLLGHDDG----VTSVGIFPDNLTL-ASG 317
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD + G + T+ R + + P G LV+A +D +D+R
Sbjct: 318 SLDKTIKLWDIKT--GTEICTLTGHGER--INSIAISPAGKMLVSAS-SDHTLKLWDLRS 372
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+ + GH +V + D LV+ +D +K+W + +
Sbjct: 373 RQE-IQTLTGHSDSVNAVAMTADGKMLVSGSSDKTIKIWQMPE 414
>gi|332706346|ref|ZP_08426409.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332354895|gb|EGJ34372.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 1625
Score = 68.2 bits (165), Expect = 7e-09, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 43/269 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLV------DHPVVAVVDHSKVCDYYICTPAKLS 101
+ F P D+V A+ G+ ++++ + LV +P++
Sbjct: 1315 LSFSPDDNVIASLGLDGSVKLWKLDGTLVKTLEENQNPII-------------------- 1354
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S + P G+ L S DG V + LE K+ I D H V+SV +S D L AS
Sbjct: 1355 SFSFSP--DGKFLASAGLDGTVKLWSLEGKL-IKTIDAHKAS-VYSVSFSP-DAQLFASA 1409
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+DGT+++W+ G+ ++T++ V+F P G ++A D +++
Sbjct: 1410 SNDGTVKLWNLI---GQQLATLK--GHNDDFDSVKFSPNGK-IIATASKDGTLKLWNLSG 1463
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + GH V + F D TL TA DG +KLWN+ + + T KGH N
Sbjct: 1464 --EELETLKGHSAAVISLSFSRDGQTLATASLDGTIKLWNLQGQQ-LATLKGHSGVVN-- 1518
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
LS +G +L GS V ++ + G+
Sbjct: 1519 SLSFIPYGTILASGSSDGTVKLWSLPEGK 1547
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 136 ERDEHGGRRVW--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
E + G W SV +S D A+GS D T+++W GK + T+ S V
Sbjct: 968 ESNRLEGYESWVNSVSFSP-DGQFIATGSADDTVKLWH---RDGKLLRTL--VGHSSYVN 1021
Query: 194 CVEFHPFGSSLVAAGCADK--KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
V F P G L+A G AD K + + K + +L G K++++ R+ TL T
Sbjct: 1022 SVSFSPDGQ-LLATGSADGTVKLWNLNTGKEIGTLLGHTGTVKSLSFSRY--GKTLTTGS 1078
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
DG +KLWN+ + IRT G + LS G L+ S + V ++D R G P+
Sbjct: 1079 ADGTVKLWNLETGQEIRTLLGQ--KADITSLSFILDGELIVSASRDSTVSLWD-RQGNPI 1135
Query: 312 WVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
+P A E G V+S+ + D TLV DG
Sbjct: 1136 G----QPFQA--QEAG-VTSI---SISPDGQTLVTANMDG 1165
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 70/282 (24%), Positives = 118/282 (41%), Gaps = 40/282 (14%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
LRT V SS N+ + F P + ATG ++++N+ + + ++ H
Sbjct: 1010 LRTLVGHSSYVNS--------VSFSPDGQLLATGSADGTVKLWNLNT---GKEIGTLLGH 1058
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR-V 145
+ T LS ++ G+ L +G DG V ++LE I R G + +
Sbjct: 1059 TG-------TVKSLSFSRY-----GKTLTTGSADGTVKLWNLETGQEI--RTLLGQKADI 1104
Query: 146 WSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSL 204
S+ + D L S S D T+ +WD + G + QP A + V + P G +L
Sbjct: 1105 TSLSFIL-DGELIVSASRDSTVSLWDRQ---GNPIG--QPFQAQEAGVTSISISPDGQTL 1158
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
V A D ++++ L G T++ + F D T+ T DG +KLW+ +
Sbjct: 1159 VTAN-MDGAVILWNLQGQEKRTLQSSG--ATISSVSFSPDGQTIATGSFDGTVKLWS-RE 1214
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+ ++ GH NR +S G +L S V ++ V
Sbjct: 1215 GQELQILPGH--NRGITTISFSPDGNILATASRDLTVRLWSV 1254
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 29/239 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P ATG +++++ L+ +V HS + ++S+
Sbjct: 979 VNSVSFSPDGQFIATGSADDTVKLWHRDGKLLR----TLVGHS----------SYVNSVS 1024
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G++L +G DG V ++L I H G V S+ +S+ L +GS D
Sbjct: 1025 FSP--DGQLLATGSADGTVKLWNLNTGKEIGTLLGHTGT-VKSLSFSRYGKTL-TTGSAD 1080
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
GT+++W+ + G+ + T+ ++ + + F G +V+A D +D + +
Sbjct: 1081 GTVKLWN--LETGQEIRTLL--GQKADITSLSFILDGELIVSAS-RDSTVSLWD--RQGN 1133
Query: 225 PV-LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV--NDSRVIRTYKGHVNNRNF 279
P+ F VT I D TLVTA DG + LWN+ + R +++ +++ +F
Sbjct: 1134 PIGQPFQAQEAGVTSISISPDGQTLVTANMDGAVILWNLQGQEKRTLQSSGATISSVSF 1192
>gi|224146578|ref|XP_002326058.1| predicted protein [Populus trichocarpa]
gi|222862933|gb|EEF00440.1| predicted protein [Populus trichocarpa]
Length = 345
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 29/269 (10%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
+I ++F+P+ +V A+G ++I ++ + H + ++ + K + L
Sbjct: 57 AIYTMKFNPAGNVIASGSHDKEIFLWYM--------------HGECKNFMVMRGHKNAVL 102
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
G + S D V +D+E I + EH V S S+ P L SGSD
Sbjct: 103 DLHWTADGSQIISASPDKTVRAWDVETGKQIKKMAEHSSF-VNSCCPSRRGPPLVVSGSD 161
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
DGT ++WD R G +Q + + V F S + G D +D+RK
Sbjct: 162 DGTSKLWDLRQKGA-----IQTFPDKYQITAVSFSD-ASDKIFTGGIDNDVKVWDIRKG- 214
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN-- 276
+ + +GH+ +T ++ D L+T G D L +W++ +R ++ ++GH +N
Sbjct: 215 EVTMTLEGHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVKIFEGHQHNFE 274
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+N + S G + GS V+++D
Sbjct: 275 KNLLKCSWSPDGSKVTAGSADRMVYIWDT 303
>gi|118372950|ref|XP_001019669.1| hypothetical protein TTHERM_00134890 [Tetrahymena thermophila]
gi|89301436|gb|EAR99424.1| hypothetical protein TTHERM_00134890 [Tetrahymena thermophila
SB210]
Length = 623
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 12/162 (7%)
Query: 145 VWSVDY-SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
VW V Y GD ++ SGS D T +++D C GK V T + + +V CV+F P+ S+
Sbjct: 430 VWDVAYHDTGDFIV--SGSMDHTAKLFDLGC--GKRVHTFK--GHKDSVNCVKFQPY-SN 482
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN 262
++A AD+ +D+R + F GHR TV Y+ F L DTL + DG +K+W+V
Sbjct: 483 ILATASADQTLSLWDMRSGL-CAQTFYGHRITVNYLDFSLKGDTLASCDADGVVKVWDVR 541
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
+ Y G V + N V + + G ++ C + + +++
Sbjct: 542 MVKERNQYMGSVKSVNSVAID--KSGVMIACADDEGNIKLFN 581
>gi|393231054|gb|EJD38651.1| WD40 repeat-like protein [Auricularia delicata TFB-10046 SS5]
Length = 415
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 138/316 (43%), Gaps = 35/316 (11%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYN-IKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
D + + + S+S+ +G + IRI++ +K +V P++ HS D C
Sbjct: 2 DRVLSVAYLRSESLIVSGSADKSIRIWDALKGTVVLGPLLG---HS---DLVCCVAVSPD 55
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S + L + D + +D E VPI + V SV YS D S
Sbjct: 56 SHQ---------LCTASDDRTIRRWDPESGVPIGKPMTGHSGCVTSVAYSP-DGTRIVSC 105
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+DDGT+++WD G+ + V A VCCV F P G+ +A+G D +D
Sbjct: 106 ADDGTVRLWD--ASSGETLG-VPLEAHWGRVCCVAFSPDGA-CIASGSGDCTIRLWDSAT 161
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ +GH +V + F D L++ D +++WNV ++ RT +GH N V
Sbjct: 162 GAH-LAALEGHSNSVCSVCFSPDRIHLLSGSWDMTVRIWNVQTRQLERTVRGHSNLVESV 220
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
+S G + GS + ++D + GE V P+T +V SV + G
Sbjct: 221 AIS--PSGQYIASGSSDQTIRIWDAQTGEVV----GAPLTG---HTNWVHSVAFSPDGR- 270
Query: 341 ECTLVAGGSDGLLHVF 356
++V+G DG L V+
Sbjct: 271 --SIVSGSKDGTLRVW 284
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
L SG +D V ++++ + ER G V SV S + ASGS D T+++WD
Sbjct: 187 LLSGSWDMTVRIWNVQTRQ--LERTVRGHSNLVESVAISPSGQYI-ASGSSDQTIRIWDA 243
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
+ G+ V + + V V F P G S+V+ G D +DV + + GH
Sbjct: 244 QT--GEVVG-APLTGHTNWVHSVAFSPDGRSIVS-GSKDGTLRVWDVATGMH-LATLKGH 298
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
+ +V + F D LV+ D +++WN+ ++ T +GH N V +S G +
Sbjct: 299 QYSVDSLCFSPDRIHLVSGSRDNIVRIWNLATWQLEHTLRGHSNYIQSVAIS--PSGRYI 356
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GS + ++D + GE +
Sbjct: 357 ASGSIDQTIRIWDTQTGEAL 376
>gi|427706511|ref|YP_007048888.1| serine/threonine protein kinase with WD40 repeats [Nostoc sp. PCC
7107]
gi|427359016|gb|AFY41738.1| serine/threonine protein kinase with WD40 repeats [Nostoc sp. PCC
7107]
Length = 671
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 35/306 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P+ + A+G + I+++N+ + + + H K + ++
Sbjct: 388 VNSVAFAPNGQILASGSDDKTIKLWNLGT---GTELQTLKGHLKW----------IWAIA 434
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G++L SG D + ++L I H V +V +S L ASGS D
Sbjct: 435 FHP--DGKILASGSADKTIKLWNLATTEEIRTLTGHTDG-VATVAFSPDGQTL-ASGSLD 490
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W+ GK + T + AV + F P G +L A+G DK ++V
Sbjct: 491 KTIKLWN--LTTGKLIRTFR--GHSQAVATIAFSPDGKTL-ASGSWDKTIKLWNV-ATGK 544
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ +GH + V + F D TL + D +KLWN+ IRT + H + N V
Sbjct: 545 QIRTLEGHSELVLSLAFSPDGKTLASGSKDKTIKLWNLATGETIRTLRQHSDKVNSVAYR 604
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
+G +L GS N + +++ G + + + G++ SV + D
Sbjct: 605 KTTNGIILASGSSDNTIKLWNPTTG--------QEIRTLKRDSGYIYSVA---ISADGQA 653
Query: 344 LVAGGS 349
+ +GGS
Sbjct: 654 IASGGS 659
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S ++ I F P A+G + I+++N+ + + + HS++ +
Sbjct: 511 SQAVATIAFSPDGKTLASGSWDKTIKLWNVAT---GKQIRTLEGHSEL----------VL 557
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK-GDPVLGAS 160
SL + P G+ L SG D + ++L I +H +V SV Y K + ++ AS
Sbjct: 558 SLAFSP--DGKTLASGSKDKTIKLWNLATGETIRTLRQHSD-KVNSVAYRKTTNGIILAS 614
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD 211
GS D T+++W+P G+ + T++ + + V G ++ + G A+
Sbjct: 615 GSSDNTIKLWNPTT--GQEIRTLKRDSGY--IYSVAISADGQAIASGGSAE 661
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 8/135 (5%)
Query: 181 STVQPSASR---SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVT 237
S QP R S V V F P G ++A+G DK +++ + + GH K +
Sbjct: 374 SAAQPQTFRGHASDVNSVAFAPNGQ-ILASGSDDKTIKLWNLGTGTE-LQTLKGHLKWIW 431
Query: 238 YIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
I F D L + D +KLWN+ + IRT GH + V S G L GS
Sbjct: 432 AIAFHPDGKILASGSADKTIKLWNLATTEEIRTLTGHTDGVATVAFS--PDGQTLASGSL 489
Query: 297 TNQVFVYDVRWGEPV 311
+ ++++ G+ +
Sbjct: 490 DKTIKLWNLTTGKLI 504
>gi|269125671|ref|YP_003299041.1| WD-40 repeat-containing protein [Thermomonospora curvata DSM 43183]
gi|268310629|gb|ACY97003.1| WD-40 repeat protein [Thermomonospora curvata DSM 43183]
Length = 344
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 25/268 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+G I F P ++ AT G ++++ +++ ++ + + C + S+
Sbjct: 21 VGPIAFSPDGTILATAGEDETVKLWQVET----GQLITTLTGHRGCVF---------SVA 67
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G L + D V +D++ I EH G V SV +S VL ++G D
Sbjct: 68 FSP--DGTTLATASRDETVKLWDVKTGHLITTLTEHQG-WVRSVAFSPDGAVLASAGG-D 123
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
GT ++W + G ++T++ AV V F P G +++A AD ++ K
Sbjct: 124 GTAKLWQAKT--GHLITTLRE--HDWAVFWVVFSPDG-TILATATADGVVELWEA-KTGQ 177
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ DGH V + F D L T+ D +KLW V R+I T G + +F L+
Sbjct: 178 LITTLDGHEDLVVEVAFSPDGSLLATSSHDETVKLWQVESGRLITTLTGD-EDFSFGALA 236
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPV 311
G L SE V ++DV+ G +
Sbjct: 237 FSPDGTTLATASEDKTVKLWDVKTGHLI 264
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 105/266 (39%), Gaps = 27/266 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + AT ++++++K+ H + + +H +P
Sbjct: 66 VAFSPDGTTLATASRDETVKLWDVKT---GHLITTLTEHQGWVRSVAFSP---------- 112
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G VL S DG + + I EH W V +S +L A+ + DG +
Sbjct: 113 --DGAVLASAGGDGTAKLWQAKTGHLITTLREHDWAVFWVV-FSPDGTIL-ATATADGVV 168
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK-MVDPV 226
++W+ + G+ ++T+ V V F P GS L+A D+ + V +
Sbjct: 169 ELWEAKT--GQLITTLD--GHEDLVVEVAFSPDGS-LLATSSHDETVKLWQVESGRLITT 223
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG-LSVW 285
L D D TL TA D +KLW+V +I T GH R+ +G ++
Sbjct: 224 LTGDEDFSFGALAFSPDGTTLATASEDKTVKLWDVKTGHLITTLTGH---RHIIGSVAFS 280
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPV 311
G +L S V ++D + G +
Sbjct: 281 PDGTVLATTSFDATVKLWDAKTGHLI 306
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 54/136 (39%), Gaps = 14/136 (10%)
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GHR V I F D L TAG D +KLW V ++I T GH V S
Sbjct: 14 LTGHRGWVGPIAFSPDGTILATAGEDETVKLWQVETGQLITTLTGHRGCVFSVAFS--PD 71
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G L S V ++DV+ G +T +G+V SV + D L +
Sbjct: 72 GTTLATASRDETVKLWDVKTG--------HLITTLTEHQGWVRSVAFS---PDGAVLASA 120
Query: 348 GSDGLLHVFVGKKKPL 363
G DG ++ K L
Sbjct: 121 GGDGTAKLWQAKTGHL 136
>gi|413919969|gb|AFW59901.1| hypothetical protein ZEAMMB73_759012, partial [Zea mays]
Length = 695
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 23/261 (8%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ + ++ LK TS RVL +G D V + + K I H V SV +
Sbjct: 14 FVAHASNVNCLKIGRKTS-RVLVTGGEDHKVNLWAIGKPNSILSLSGHTSA-VESVGFDS 71
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ V A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G D
Sbjct: 72 TE-VFVAAGAASGTIKLWD--LEEAKIVRTL--TGHRSNCMSVDFHPFGE-FFASGSLDT 125
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D+R+ + + + GH + V IRF D +V+ G D +KLW++ +++ +K
Sbjct: 126 NLKIWDIRRK-NCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNIVKLWDLTAGKLLHEFK 184
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
H + H LL GS V +D + FE + + G E V S
Sbjct: 185 CHEGQIQCIDFHP--HEFLLATGSADKTVKFWD--------LETFELIGSTGPETTGVRS 234
Query: 332 VCWRRVGEDECTLVAGGSDGL 352
+ + G TL+ G + L
Sbjct: 235 MTFNPDGR---TLLCGLHESL 252
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V C++ S ++ G D K + + K + +L GH V + F +
Sbjct: 16 AHASNVNCLKIGRKTSRVLVTGGEDHKVNLWAIGK-PNSILSLSGHTSAVESVGFDSTEV 74
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH--GGLLGCGSETNQVFVY 303
V AG G +KLW++ +++++RT GH +N +SV H G GS + ++
Sbjct: 75 FVAAGAASGTIKLWDLEEAKIVRTLTGHRSN----CMSVDFHPFGEFFASGSLDTNLKIW 130
Query: 304 DVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
D+R +H + +G V R D +V+GG D ++ ++
Sbjct: 131 DIRRKN--CIHTY---------KGHTRGVNAIRFTPDGRWVVSGGEDNIVKLW 172
>gi|254421468|ref|ZP_05035186.1| hypothetical protein S7335_1618 [Synechococcus sp. PCC 7335]
gi|196188957|gb|EDX83921.1| hypothetical protein S7335_1618 [Synechococcus sp. PCC 7335]
Length = 1187
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 122/304 (40%), Gaps = 60/304 (19%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVC----------------- 90
I + P S+ +GG + +RI+NI++ H + ++ ++
Sbjct: 814 IVYSPDGSLLVSGGEDQTVRIWNIQT---GHCLKSLTGYANAIRAITFSPDGQTLVSGSD 870
Query: 91 DYYI---------CTPAKLSSLKWKPGTS----GRVLGSGDYDGVVMEYDLEKKVPIFER 137
DY + C W + R++ S D V +D+++ +
Sbjct: 871 DYTVKLWDIEQEQCLQTLTGHKNWILSVAVHPDSRLIASSSADRTVKIWDIQRNRCVRTL 930
Query: 138 DEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEF 197
H VWSV +S +L ASG DG++ +WD + DG + PS RS V F
Sbjct: 931 PGHTNT-VWSVAFSPNRQIL-ASGGHDGSIHLWDIQ-DGHRLAILKHPSQVRS----VAF 983
Query: 198 HPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--------------- 242
P G +LV+ G +DK+ +DV + V GH V + +
Sbjct: 984 SPDGRTLVS-GSSDKQVRLWDVESG-QCLRVMSGHSGMVWTVAYRSKTVDSKTVNSKTDG 1041
Query: 243 -DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVF 301
D T+ +A +D L+LW+ +RT +GH N + S G LL GS V
Sbjct: 1042 SDEPTIASASSDKTLRLWHAQSGDCLRTLEGHTNWIWSIAFS--PQGNLLASGSADKTVK 1099
Query: 302 VYDV 305
++DV
Sbjct: 1100 LWDV 1103
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 124/278 (44%), Gaps = 47/278 (16%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++++ + F P+ + A+GG I +++I+ D +A++ H P+++
Sbjct: 934 TNTVWSVAFSPNRQILASGGHDGSIHLWDIQ----DGHRLAILKH----------PSQVR 979
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDY----------- 150
S+ + P GR L SG D V +D+E + H G VW+V Y
Sbjct: 980 SVAFSP--DGRTLVSGSSDKQVRLWDVESGQCLRVMSGHSGM-VWTVAYRSKTVDSKTVN 1036
Query: 151 SKGD----PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
SK D P + AS S D T+++W G C+ T++ + + + F P G+ L+A
Sbjct: 1037 SKTDGSDEPTI-ASASSDKTLRLW--HAQSGDCLRTLE--GHTNWIWSIAFSPQGN-LLA 1090
Query: 207 AGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVND 263
+G ADK +DV + + +L GH V + F D L + D +KLW+V
Sbjct: 1091 SGSADKTVKLWDVDNGRCLKTLL---GHGNVVRSLAFSPKGDYLASVSEDETIKLWDVKT 1147
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVF 301
+T +G +R + G+ + GL T QV
Sbjct: 1148 GNCFKTLRG---DRPYEGMDITGASGLTDAQKATLQVL 1182
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 133/305 (43%), Gaps = 40/305 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F P A+G + ++I+++ + ++ + H+ + +P
Sbjct: 605 IAFSPDGQWLASGSADQTVKIWDVHTGCC---MLTLKGHTNWVRSVVFSP---------- 651
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+++ SG D +V +D+E+ + H V V +S ++ ++G D +
Sbjct: 652 --DSKIVASGSSDQMVKLWDVERCCCLKTLKGHTNY-VQGVSFSPDGQLIASAGWDQ-RV 707
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+WD + G+C+ TV +++ + F P G ++A G D+ +DV +
Sbjct: 708 NIWD--VESGECLQTVD---DKNSFWSIAFSPDGE-MLATGSTDETVRMWDVHTG-QCLK 760
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
F GH V + F + LV+ G D +K+WNV R ++T GH RN++ V+
Sbjct: 761 TFTGHTHAVRSVTFRPNGQELVSGGGDQTIKIWNVQTGRCLKTLSGH---RNWIWSIVYS 817
Query: 287 -HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
G LL G E V +++++ G H + +T G+ +++ D TLV
Sbjct: 818 PDGSLLVSGGEDQTVRIWNIQTG-----HCLKSLT------GYANAIRAITFSPDGQTLV 866
Query: 346 AGGSD 350
+G D
Sbjct: 867 SGSDD 871
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 28/266 (10%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVC-DYYICTPAKLS 101
+S I F P + ATG +R++++ H+ C + +
Sbjct: 725 NSFWSIAFSPDGEMLATGSTDETVRMWDV--------------HTGQCLKTFTGHTHAVR 770
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ ++P +G+ L SG D + ++++ + H +WS+ YS D L SG
Sbjct: 771 SVTFRP--NGQELVSGGGDQTIKIWNVQTGRCLKTLSGH-RNWIWSIVYSP-DGSLLVSG 826
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+D T+++W+ + G C+ ++ A +A+ + F P G +LV +G D +D+ +
Sbjct: 827 GEDQTVRIWNIQT--GHCLKSLTGYA--NAIRAITFSPDGQTLV-SGSDDYTVKLWDIEQ 881
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ GH+ + + D + ++ D +K+W++ +R +RT GH N V
Sbjct: 882 E-QCLQTLTGHKNWILSVAVHPDSRLIASSSADRTVKIWDIQRNRCVRTLPGHTNTVWSV 940
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVR 306
S R +L G + ++D++
Sbjct: 941 AFSPNRQ--ILASGGHDGSIHLWDIQ 964
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 134/314 (42%), Gaps = 46/314 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+ G +++ I++++S C + S+ + P
Sbjct: 689 VSFSPDGQLIASAGWDQRVNIWDVES--------------GECLQTVDDKNSFWSIAFSP 734
Query: 108 GTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
G +L +G D V +D+ + + F H R SV + L SG D
Sbjct: 735 --DGEMLATGSTDETVRMWDVHTGQCLKTFTGHTHAVR---SVTFRPNGQEL-VSGGGDQ 788
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++W+ + G+C+ T+ S R+ + + + P GS LV+ G D+ ++++
Sbjct: 789 TIKIWNVQT--GRCLKTL--SGHRNWIWSIVYSPDGSLLVSGG-EDQTVRIWNIQTG-HC 842
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ G+ + I F D TLV+ D +KLW++ + ++T GH +N++ LSV
Sbjct: 843 LKSLTGYANAIRAITFSPDGQTLVSGSDDYTVKLWDIEQEQCLQTLTGH---KNWI-LSV 898
Query: 285 WRH--GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDEC 342
H L+ S V ++D++ V + G ++V +
Sbjct: 899 AVHPDSRLIASSSADRTVKIWDIQRNRCV-----------RTLPGHTNTVWSVAFSPNRQ 947
Query: 343 TLVAGGSDGLLHVF 356
L +GG DG +H++
Sbjct: 948 ILASGGHDGSIHLW 961
>gi|10178281|emb|CAC08339.1| katanin p80 subunit-like protein [Arabidopsis thaliana]
Length = 823
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G + D S+G L A+G+ GT++
Sbjct: 121 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEG---LVAAGAASGTIK 177
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V FHPFG A+G D +D+RK +
Sbjct: 178 LWD--LEEAKVVRTL--TGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 231
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V +RF D +V+ G D +K+W++ +++ +K H L H
Sbjct: 232 YKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH--EGKIQSLDFHPH 289
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V +D + FE + + G+E
Sbjct: 290 EFLLATGSADKTVKFWD--------LETFELIGSGGTE 319
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A +AV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 107 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDASEG 165
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++V+RT GH N V ++ G GS + ++D+
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGH--RSNCVSVNFHPFGEFFASGSLDTNLKIWDI 223
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H + +G V R D +V+GG D ++ V+
Sbjct: 224 R--KKGCIHTY---------KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 263
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P FA+G + ++I++I+ H H++ + TP
Sbjct: 200 VNFHPFGEFFASGSLDTNLKIWDIRKKGCIH---TYKGHTRGVNVLRFTP---------- 246
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D VV +DL + E H G ++ S+D+ + +L A+GS D T+
Sbjct: 247 --DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG-KIQSLDFHPHEFLL-ATGSADKTV 302
Query: 168 QMWDPRC-----DGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
+ WD GG + V C+ F+P G S++
Sbjct: 303 KFWDLETFELIGSGG---------TETTGVRCLTFNPDGKSVL 336
>gi|356573375|ref|XP_003554837.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Glycine max]
Length = 758
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 110/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H + SV + + VL A+G+ GT+++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHSSG-IDSVSFDSSE-VLVAAGAASGTIKL 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + RS V+FHPFG A+G D +D+RK + +
Sbjct: 86 WD--LEEAKIVRTL--TGHRSNCTSVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHTY 139
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V IRF D +V+ G D +KLW++ +++ +K H + +
Sbjct: 140 KGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEGQIQCIDFH--PNE 197
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS V +D + FE + +AG E V S+ + D TL+ G
Sbjct: 198 FLLATGSADRTVKFWD--------LETFELIGSAGPETTGVRSLTF---SPDGRTLLCGL 246
Query: 349 SDGL 352
+ L
Sbjct: 247 HESL 250
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHASTVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLSGHSSGIDSVSFDSSEV 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH +N V + G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDFHPF--GEFFASGSLDTNLKIWDI 130
Query: 306 R 306
R
Sbjct: 131 R 131
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 103/232 (44%), Gaps = 26/232 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSLKWK 106
++F P FA+G + ++I++I+ K C + Y ++++++
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIR--------------KKGCIHTYKGHTRGVNAIRFT 152
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + SG D V +DL + + H G ++ +D+ + +L A+GS D T
Sbjct: 153 P--DGRWVVSGGEDNTVKLWDLTAGKLLHDFKCHEG-QIQCIDFHPNEFLL-ATGSADRT 208
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
++ WD + + + + P + V + F P G +L+ K ++++ + D V
Sbjct: 209 VKFWD--LETFELIGSAGPET--TGVRSLTFSPDGRTLLCGLHESLKVFSWEPIRCHDMV 264
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
D ++ + F + L + C+ +W V+ SR+ +VN+ N
Sbjct: 265 ---DVGWSRLSDLNFHEGKLLGCSYNQSCVGVWVVDISRIEPYALNNVNHLN 313
>gi|153873535|ref|ZP_02002086.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
PS]
gi|152070000|gb|EDN67915.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
PS]
Length = 369
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+GG + I N+ V + A+ H +P
Sbjct: 133 VTFSPYGKILASGG---EDHIINLWEVGTGKKLHALKGHKNAVTSVTFSP---------- 179
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR-VWSVDYSKGDPVLGASGSDDGT 166
GR L S +D + +++ + R G RR V V +S +L AS S D T
Sbjct: 180 --DGRFLASSSWDRDIHLWEIATGRKV--RTLKGHRRNVPFVTFSPNGKML-ASASWDKT 234
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD R GK + T++ R + V F P G +L A+G D+ +DV K
Sbjct: 235 LRLWDVRT--GKKLRTLR--GHRGWLNTVAFSPDGKTL-ASGSLDRTIRLWDVDKKGKRS 289
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGH 273
V GHR V + F + ++ +G+ D ++LWNV ++ RT KGH
Sbjct: 290 RVLRGHRSAVMSVSFSNDGKILASGSLDKTIRLWNVETGKLERTLKGH 337
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 23/238 (9%)
Query: 125 EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQ 184
E+ L KV + GR V S+ +S +L ASGS+D T+++W+ + G+ + T++
Sbjct: 70 EFQLPSKV--LRTLKGHGRNVTSIAFSPDGKML-ASGSEDETIKLWN--VNTGEVLRTLK 124
Query: 185 PSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-D 243
A V V F P+G ++A+G D ++V + GH+ VT + F D
Sbjct: 125 --AHNFWVTSVTFSPYGK-ILASGGEDHIINLWEV-GTGKKLHALKGHKNAVTSVTFSPD 180
Query: 244 VDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
L ++ D + LW + R +RT KGH N FV S +G +L S + ++
Sbjct: 181 GRFLASSSWDRDIHLWEIATGRKVRTLKGHRRNVPFVTFSP--NGKMLASASWDKTLRLW 238
Query: 304 DVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKK 361
DVR G + + RG++++V + D TL +G D + ++ KK
Sbjct: 239 DVRTG--------KKLRTLRGHRGWLNTVAF---SPDGKTLASGSLDRTIRLWDVDKK 285
>gi|347836641|emb|CCD51213.1| similar to HET-E [Botryotinia fuckeliana]
Length = 520
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 46/301 (15%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIY----------------NIKSVLV--DHPVVAVV 84
D I + F P+ + A+G + IR++ NI SV D +VA
Sbjct: 156 DWIRSVAFSPNGKIVASGSYDKTIRLWDTTTGKSLQTFEGHSRNIWSVAFSQDGKIVASG 215
Query: 85 DHSKVCDYYICTPAK-----------LSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KK 131
K + K +SS+ + P +G+++ SG D + +D K
Sbjct: 216 SSDKTIRLWDTATGKSLQTLEGHSSDVSSVAFSP--NGKMVASGSDDKTIRLWDTTTGKS 273
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
+ FE R +WSV +S ++ ASGSDD T+++WD G+ + T++ +S
Sbjct: 274 LQTFEGHS---RNIWSVAFSPNGKII-ASGSDDNTIRLWDTAT--GESLQTLEGHSSY-- 325
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
+ V F G +VA+G +DK +D + + +GH + + F +V +G
Sbjct: 326 IYSVAFSQDG-KIVASGSSDKTIRLWDT-TTGKSLQMLEGHWDWIRSVAFSPNGKIVASG 383
Query: 252 T-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
+ D ++LW+ + ++ +GH ++ + V S G ++ GS+ + ++D G+
Sbjct: 384 SYDNTIRLWDTATGKSLQMLEGHSSDVSSVAFS--PDGKIVASGSDDKTIRLWDTTTGKS 441
Query: 311 V 311
+
Sbjct: 442 L 442
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+SS+ + P G+++ SG D + +D + + H V SV +S+ D + A
Sbjct: 32 VSSVAFSP--DGKIVASGSNDKTIRLWDTTTGESLQTLEGHS-SHVSSVAFSQ-DGKIVA 87
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD GK + T++ +S V V F P G +VA+G DK +D
Sbjct: 88 SGSSDKTIRLWDTTT--GKSLQTLEGHSSH--VSSVAFSPNGK-MVASGSDDKTIRLWDT 142
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + +GH + + F +V +G+ D ++LW+ + ++T++GH +RN
Sbjct: 143 -TTGESLQTLEGHWDWIRSVAFSPNGKIVASGSYDKTIRLWDTTTGKSLQTFEGH--SRN 199
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ + G ++ GS + ++D G+ +
Sbjct: 200 IWSVAFSQDGKIVASGSSDKTIRLWDTATGKSL 232
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGSDD T+++WD GK + T++ +S V V F P G +VA+G DK +D
Sbjct: 3 ASGSDDKTIRLWDTTT--GKSLQTLEGHSSY--VSSVAFSPDG-KIVASGSNDKTIRLWD 57
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +GH V+ + F +V +G +D ++LW+ + ++T +GH ++
Sbjct: 58 T-TTGESLQTLEGHSSHVSSVAFSQDGKIVASGSSDKTIRLWDTTTGKSLQTLEGHSSHV 116
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ V S +G ++ GS+ + ++D GE +
Sbjct: 117 SSVAFS--PNGKMVASGSDDKTIRLWDTTTGESL 148
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 131/295 (44%), Gaps = 39/295 (13%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P + A+G + IR+++ + + HS + +SS+
Sbjct: 32 VSSVAFSPDGKIVASGSNDKTIRLWD---TTTGESLQTLEGHS----------SHVSSVA 78
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ G+++ SG D + +D + + H V SV +S ++ ASGSDD
Sbjct: 79 FSQ--DGKIVASGSSDKTIRLWDTTTGKSLQTLEGH-SSHVSSVAFSPNGKMV-ASGSDD 134
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++WD G+ + T++ + V F P G +VA+G DK +D
Sbjct: 135 KTIRLWDTTT--GESLQTLE--GHWDWIRSVAFSPNG-KIVASGSYDKTIRLWDT-TTGK 188
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ F+GH + + + F +V +G +D ++LW+ + ++T +GH ++ + V S
Sbjct: 189 SLQTFEGHSRNIWSVAFSQDGKIVASGSSDKTIRLWDTATGKSLQTLEGHSSDVSSVAFS 248
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP---VTAAGSE 325
+G ++ GS+ + ++D G+ +W F P + A+GS+
Sbjct: 249 --PNGKMVASGSDDKTIRLWDTTTGKSLQTFEGHSRNIWSVAFSPNGKIIASGSD 301
>gi|354568144|ref|ZP_08987310.1| (Myosin heavy-chain) kinase [Fischerella sp. JSC-11]
gi|353541109|gb|EHC10579.1| (Myosin heavy-chain) kinase [Fischerella sp. JSC-11]
Length = 1376
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 21/249 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+ + L SG D +V +D+ + I R+WSV YS D L ASGSDD T+++
Sbjct: 1058 NSKYLASGSEDKIVRIWDI-RNGKIANTLRGHTSRIWSVAYSP-DGHLLASGSDDHTIRI 1115
Query: 170 WDPRCDGGK-CVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
WD R K C+ ++ V V F P G L+A+G D +DV + P +
Sbjct: 1116 WDLRHSRTKQCLRVLKDH--NHWVRSVAFSPNGQ-LLASGSDDNTVRIWDVHRDTPPK-I 1171
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH V + F L+ +G+D +++W+V IR +GH N + S
Sbjct: 1172 LRGHGNWVRTVLFSPDGQLLASGSDDNTVRIWDVQTGCEIRILQGHNNLVRSIAFSP--D 1229
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
++ GS V +++++ G+ + E +T + +V SV + G TL++G
Sbjct: 1230 SQIIASGSNDCTVKIWEIQTGKCI-----ETIT---EHKNWVHSVIFSLDGH---TLLSG 1278
Query: 348 GSDGLLHVF 356
DG +H++
Sbjct: 1279 SQDGTIHLW 1287
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 39/272 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P+ +GG +RI++I++ +K C + + S+ + P
Sbjct: 927 VAFCPNGQRLVSGGDDNTVRIWDIRT-------------TKCCANLLGHENWVRSVAFSP 973
Query: 108 GTSGRVLGSGDYDGVVMEYDLEK---KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G+ + SG D V +DL+ + ++ D RVWSV +S D ASGSDD
Sbjct: 974 --DGQRIVSGSDDNTVRIWDLQTNQCRNILYGHDN----RVWSVAFSL-DGQRIASGSDD 1026
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KM 222
T++ WD + G C+STV+ + + + V F P S +A+G DK +D+R K+
Sbjct: 1027 QTVKTWD--ANTGLCLSTVRGYS--NWILSVAFSP-NSKYLASGSEDKIVRIWDIRNGKI 1081
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDG-CLKLWNVNDSRV---IRTYKGHVNNRN 278
+ GH + + + L+ +G+D +++W++ SR +R K H +
Sbjct: 1082 AN---TLRGHTSRIWSVAYSPDGHLLASGSDDHTIRIWDLRHSRTKQCLRVLKDHNHWVR 1138
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
V S +G LL GS+ N V ++DV P
Sbjct: 1139 SVAFSP--NGQLLASGSDDNTVRIWDVHRDTP 1168
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ + P + A+G IRI++++ + + DH+ +P
Sbjct: 1095 VAYSPDGHLLASGSDDHTIRIWDLRHSRTKQCLRVLKDHNHWVRSVAFSP---------- 1144
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+G++L SG D V +D+ + P HG V +V +S D L ASGSDD T+
Sbjct: 1145 --NGQLLASGSDDNTVRIWDVHRDTPPKILRGHGNW-VRTVLFSP-DGQLLASGSDDNTV 1200
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDP 225
++WD + G + +Q + V + F P S ++A+G D ++++ K ++
Sbjct: 1201 RIWDVQT--GCEIRILQ--GHNNLVRSIAFSP-DSQIIASGSNDCTVKIWEIQTGKCIET 1255
Query: 226 VLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+ H+ V + F LD TL++ DG + LWN+++ ++I++++
Sbjct: 1256 I---TEHKNWVHSVIFSLDGHTLLSGSQDGTIHLWNIHEHKLIKSFE 1299
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV +S D L AS S+DGT+++W+ D G+ + T+ + + V F P G+ +
Sbjct: 840 VRSVTFSH-DGKLLASASEDGTIKIWN--VDTGENLKTLTGHVGK--IWSVAFSPVGT-M 893
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A+G DK +D + + GH V + F + LV+ G D +++W++
Sbjct: 894 LASGGEDKTIKLWD-SNTGNCLKTLTGHENWVRSVAFCPNGQRLVSGGDDNTVRIWDIRT 952
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
++ GH N V S G + GS+ N V ++D++
Sbjct: 953 TKCCANLLGHENWVRSVAFSP--DGQRIVSGSDDNTVRIWDLQ 993
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 16/166 (9%)
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V + F P G A+G D+ +D+ K +GH V + F D L +A
Sbjct: 798 VRSIAFSPDGQKF-ASGSDDQSIKIWDI-KTGKFFCTLEGHISCVRSVTFSHDGKLLASA 855
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
DG +K+WNV+ ++T GHV V S G +L G E + ++D G
Sbjct: 856 SEDGTIKIWNVDTGENLKTLTGHVGKIWSVAFSP--VGTMLASGGEDKTIKLWDSNTGNC 913
Query: 311 VWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ T G E +V SV + G+ LV+GG D + ++
Sbjct: 914 L-------KTLTGHE-NWVRSVAFCPNGQ---RLVSGGDDNTVRIW 948
>gi|425465666|ref|ZP_18844973.1| Genome sequencing data, contig C309 (fragment) [Microcystis
aeruginosa PCC 9809]
gi|389832046|emb|CCI24681.1| Genome sequencing data, contig C309 (fragment) [Microcystis
aeruginosa PCC 9809]
Length = 816
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H G V SV +S L SGSDD T+++W+ + G+ + T++ V V F P
Sbjct: 570 HNGS-VNSVSFSPDGKTL-VSGSDDKTIKLWN--VETGQEIRTLK--GHDELVTSVNFSP 623
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKL 258
G +LV+ G DK ++V + + + GH+ V + F D TLV+ D +KL
Sbjct: 624 DGKTLVS-GSDDKTIKLWNV-ETGEEIRTLKGHKDFVRSVNFSSDGKTLVSGSDDNTIKL 681
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
WNV + IRT KGH + + ++ G L GS N + +++V G+ E
Sbjct: 682 WNVETGQEIRTLKGH--DSAVISVNFSSDGKTLVSGSADNTIKLWNVETGK-------EI 732
Query: 319 VTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVG 358
T G + FV SV + G+ TLV+G D + ++ G
Sbjct: 733 RTLRG-HKDFVWSVNFSPDGK---TLVSGSEDNTIKLWNG 768
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 24/221 (10%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P +G + I+++N+++ + + H ++ +S+
Sbjct: 573 SVNSVSFSPDGKTLVSGSDDKTIKLWNVET---GQEIRTLKGHDELV----------TSV 619
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P G+ L SG D + +++E I H V SV++S L SGSD
Sbjct: 620 NFSP--DGKTLVSGSDDKTIKLWNVETGEEIRTLKGHKDF-VRSVNFSSDGKTL-VSGSD 675
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++W+ + G+ + T++ SAV V F G +LV+ G AD ++V +
Sbjct: 676 DNTIKLWN--VETGQEIRTLK--GHDSAVISVNFSSDGKTLVS-GSADNTIKLWNV-ETG 729
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+ GH+ V + F D TLV+ D +KLWN N+
Sbjct: 730 KEIRTLRGHKDFVWSVNFSPDGKTLVSGSEDNTIKLWNGNN 770
>gi|297806881|ref|XP_002871324.1| hypothetical protein ARALYDRAFT_487674 [Arabidopsis lyrata subsp.
lyrata]
gi|297317161|gb|EFH47583.1| hypothetical protein ARALYDRAFT_487674 [Arabidopsis lyrata subsp.
lyrata]
Length = 840
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G + D S+G L A+G+ GT++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEG---LVAAGAASGTIK 84
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V FHPFG A+G D +D+RK +
Sbjct: 85 LWD--LEEAKVVRTL--TGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 138
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V +RF D +V+ G D +K+W++ +++ +K H L H
Sbjct: 139 YKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG--QIQSLDFHPH 196
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V +D + FE + + G+E
Sbjct: 197 EFLLATGSADKTVKFWD--------LETFELIGSGGTE 226
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A +AV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDASEG 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++V+RT GH N V ++ G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKVVRTLTGH--RSNCVSVNFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H + +G V R D +V+GG D ++ V+
Sbjct: 131 R--KKGCIHTY---------KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 170
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 31/176 (17%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P FA+G + ++I++I+ H H++ + TP
Sbjct: 107 VNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG---HTRGVNVLRFTP---------- 153
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D VV +DL + E H G ++ S+D+ + +L A+GS D T+
Sbjct: 154 --DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG-QIQSLDFHPHEFLL-ATGSADKTV 209
Query: 168 QMWDPRC-----DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+ WD GG + V+ C+ F+P G S++ K ++++
Sbjct: 210 KFWDLETFELIGSGGTETTGVR---------CLTFNPDGKSVLCGLQESLKIFSWE 256
>gi|167517975|ref|XP_001743328.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778427|gb|EDQ92042.1| predicted protein [Monosiga brevicollis MX1]
Length = 578
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+GR L +G D V + + K + H V V + D V+ A GS GT+++
Sbjct: 28 AGRYLATGGEDRKVNIWHIGKPNAVATLAGHTSP-VECVRFDNTDEVVVA-GSSSGTLKL 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + GK V T+ + +S + C++FHP+G +A+G D +D+R+ + +
Sbjct: 86 WDVK--QGKAVRTL--TGHKSNIRCLDFHPYGD-FIASGSQDTNLKIWDIRRK-GCIQTY 139
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + + + F D +V+ G DG +KLW++ +++ ++ H L
Sbjct: 140 KGHTEAINVLSFSPDGHWVVSGGEDGVVKLWDLTAGKLMTEFRDHAG--PVTDLQFHPSE 197
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS V +D + F+ V+ + E V +C+ +G L +G
Sbjct: 198 FLLATGSADRTVKFWD--------LESFQCVSTSRPESSRVRRICFDPLGR---ALYSGS 246
Query: 349 SDGL 352
D
Sbjct: 247 KDSF 250
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
V C+ +A G D+K + + K + V GH V +RF + D +V AG
Sbjct: 19 VNCIAIGRNAGRYLATGGEDRKVNIWHIGK-PNAVATLAGHTSPVECVRFDNTDEVVVAG 77
Query: 252 TD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ G LKLW+V + +RT GH N L +G + GS+ + ++D+R
Sbjct: 78 SSSGTLKLWDVKQGKAVRTLTGH--KSNIRCLDFHPYGDFIASGSQDTNLKIWDIR 131
>gi|225434135|ref|XP_002277631.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Vitis vinifera]
Length = 344
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 32/290 (11%)
Query: 26 NLRTTVSSSSSP---NAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
N + SS SP A +I ++F+P+ +V A+G R+I ++ +
Sbjct: 35 NGKQRTSSLESPIMLLAGHQSAIYTMKFNPTGTVIASGSHEREIFLWYV----------- 83
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
H ++ + K + L + T G + S D + +D+E I + EH
Sbjct: 84 ---HGDCKNFMVLKGHKNAILDLQWTTDGTQIISASPDKTLRAWDVETGKQIKKMAEHSS 140
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V S S+ P L SGSDDGT ++WD R G +Q + + V F S
Sbjct: 141 F-VNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSD-AS 193
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
+ G D +D+R+ + + GH+ +T ++ D L+T G D L +W++
Sbjct: 194 DKIFTGGIDNDVKVWDLRRN-EVTMTLQGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDM 252
Query: 262 N----DSRVIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+R ++ +GH +N +N + S G + GS V+++D
Sbjct: 253 RPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDT 302
>gi|218184808|gb|EEC67235.1| hypothetical protein OsI_34162 [Oryza sativa Indica Group]
Length = 875
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 18/182 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV + + ++GA G+ GT+++WD D K V T + RS+ ++FHPFG
Sbjct: 62 VESVSFDSSEAMIGA-GASSGTIKIWD--VDEAKVVRTF--TGHRSSCASLDFHPFGE-F 115
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
A+G +D +D+RK + + GH + + +RF D +V+ G+D +K+W++
Sbjct: 116 FASGSSDTNMKIWDMRKK-GCIHTYKGHTRRIDVLRFTPDGRWIVSGGSDNSVKIWDLTA 174
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
+++ ++ H N L H LL GS V +D + FE + ++G
Sbjct: 175 GKLLHDFRNHEGPINC--LDFHPHEFLLATGSADKTVKFWD--------LETFELIGSSG 224
Query: 324 SE 325
E
Sbjct: 225 PE 226
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 26/190 (13%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V CV+F S ++ G D+K + + K +L G V + F +
Sbjct: 14 AHASDVNCVKFGRKTSRILITGGEDQKVNLWAIGKP-SSILSLSGLTSPVESVSFDSSEA 72
Query: 247 LVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
++ AG + G +K+W+V++++V+RT+ GH + L G GS + ++D+
Sbjct: 73 MIGAGASSGTIKIWDVDEAKVVRTFTGH--RSSCASLDFHPFGEFFASGSSDTNMKIWDM 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG-----------LLH 354
R + +H + +G + R D +V+GGSD LLH
Sbjct: 131 R--KKGCIHTY---------KGHTRRIDVLRFTPDGRWIVSGGSDNSVKIWDLTAGKLLH 179
Query: 355 VFVGKKKPLS 364
F + P++
Sbjct: 180 DFRNHEGPIN 189
>gi|119490215|ref|ZP_01622728.1| WD-repeat protein [Lyngbya sp. PCC 8106]
gi|119454101|gb|EAW35254.1| WD-repeat protein [Lyngbya sp. PCC 8106]
Length = 897
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 28/223 (12%)
Query: 110 SGRVLGSG-DYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGSDDGT 166
+G +L +G D D V + + + I G + W +V +S +L ASGS+D T
Sbjct: 293 NGELLATGIDEDIVFWQTKAGRSLSILP-----GHKAWVMAVSFSPDSNIL-ASGSNDQT 346
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD + G+C+ T++ SR V + F G ++A+G DK +DV + +
Sbjct: 347 VRLWDVKT--GQCLKTLRGHKSR--VQSLTFSQDGK-MIASGSNDKTVRLWDV-ETGKCL 400
Query: 227 LVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
V GH + + I F L +++ G D ++ WN+ + +R K VN + + L
Sbjct: 401 QVLKGHYRRILAIVFHLKYGLVISCGEDETVRFWNITTGKCVRVLKTQVNWMSSIALH-- 458
Query: 286 RHGGLLGCGSETNQVFVYDVRWG----------EPVWVHDFEP 318
G +L S+ N V +DV G E VW F P
Sbjct: 459 PEGEILATASDGNTVKFWDVETGKCTKILAGYQERVWAVAFSP 501
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 27/246 (10%)
Query: 40 AVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK 99
A S+ + + F+P + + +R++NI H+K C+ +
Sbjct: 573 AYSNWVSFVTFNPDGKLLVSCSEDGLVRLWNI--------------HTKTCEKTLTGHTN 618
Query: 100 L-SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+ SS + P G++L + D + +++ + G W S L
Sbjct: 619 IVSSAAFHP--QGKLLATASDDSTIKLWNVTTGECL---KTLWGHESWVHSASFSCQGLL 673
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A+GS D T+++WD + G+C+ T+ R V V F P G ++A+G D+ +D
Sbjct: 674 ATGSRDKTIKIWD--IETGECLQTLAGHLHR--VKSVAFSPCGQ-ILASGSDDQTLKIWD 728
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+++ + + H V + F D L +AG D +KLW + ++T +GH
Sbjct: 729 IKQGI-CLQTLSEHTDWVLGVAFSPDGKMLASAGGDRTVKLWEIQTGNCVQTLRGHRQRV 787
Query: 278 NFVGLS 283
VG S
Sbjct: 788 RSVGFS 793
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
+L +G D + +D+E + H RV SV +S +L ASGSDD T+++WD
Sbjct: 672 LLATGSRDKTIKIWDIETGECLQTLAGHL-HRVKSVAFSPCGQIL-ASGSDDQTLKIWDI 729
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
+ G C+ T+ S V V F P G L +AG D+ ++++ + V GH
Sbjct: 730 K--QGICLQTL--SEHTDWVLGVAFSPDGKMLASAG-GDRTVKLWEIQTG-NCVQTLRGH 783
Query: 233 RKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
R+ V + F D +V++ D +K+WN+ + T GH V S G +
Sbjct: 784 RQRVRSVGFSYDGSKVVSSSDDHTVKVWNLTTGDCVYTCHGHSQTVWSVACS--PEGQIF 841
Query: 292 GCGSETNQVFVYDVRWGE 309
G + + ++++ GE
Sbjct: 842 ASGGDDQTIKLWEMTTGE 859
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 105/240 (43%), Gaps = 24/240 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P ++ A+G + +R++++K+ + + H +++ SL
Sbjct: 326 VMAVSFSPDSNILASGSNDQTVRLWDVKT---GQCLKTLRGH----------KSRVQSLT 372
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ G+++ SG D V +D+E + H RR+ ++ + ++ + G D+
Sbjct: 373 FSQ--DGKMIASGSNDKTVRLWDVETGKCLQVLKGH-YRRILAIVFHLKYGLVISCGEDE 429
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T++ W+ GKCV ++ + + + HP G L A + + +DV +
Sbjct: 430 -TVRFWN--ITTGKCVRVLKTQVNW--MSSIALHPEGEILATASDGNTVKF-WDV-ETGK 482
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ G+++ V + F D T D +K+WN + ++T + H + +VG S
Sbjct: 483 CTKILAGYQERVWAVAFSPDGQKFATGSNDQTIKIWNFSTGECVKTLQEHRHLVWWVGFS 542
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A+ SD T++ WD + GKC + R V V F P G A G D+ ++
Sbjct: 465 ATASDGNTVKFWD--VETGKCTKILAGYQER--VWAVAFSPDGQKF-ATGSNDQTIKIWN 519
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ V HR V ++ F D TL++ D +K W V + ++T + N
Sbjct: 520 FSTG-ECVKTLQEHRHLVWWVGFSPDGQTLISVSQDQSVKFWQVASGQCLKTLDAYSNWV 578
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+FV + G LL SE V ++++
Sbjct: 579 SFVTFN--PDGKLLVSCSEDGLVRLWNI 604
>gi|332710678|ref|ZP_08430621.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332350554|gb|EGJ30151.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 1181
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D V +D+ I EH R + SV +S L ASGS D T+++W
Sbjct: 955 GKTLASGSADHTVKLWDVSTGHCIRTFQEHTDR-LRSVAFSNDGKTL-ASGSADHTVRLW 1012
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ C+ G CV ++ ++R V V F P G L+A+G D +D+R+
Sbjct: 1013 N--CETGSCVGILRGHSNR--VHSVAFSPNGQ-LLASGSTDHTVKLWDIRES-KCCKTLT 1066
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D TL + D ++LW+V+ + GH + + V SV G
Sbjct: 1067 GHTNWVLSVAFSPDGKTLSSGSADKTVRLWDVSTGECLDICTGHSHLVSSVAFSV--DGQ 1124
Query: 290 LLGCGSETNQVFVYDVRWGE 309
++ GS+ V + DV GE
Sbjct: 1125 IMASGSQDQTVRLKDVETGE 1144
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR-VWSVDYSKGDPVLGASGSDDGTMQMW 170
+ L SG D + +D+ I R HG V+SV +S L ASGS D T+++W
Sbjct: 914 KTLASGSTDNTIRLWDVSTGCCI--RTLHGHTDWVFSVAFSSDGKTL-ASGSADHTVKLW 970
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G C+ T Q R + V F G +L A+G AD ++ + V +
Sbjct: 971 D--VSTGHCIRTFQEHTDR--LRSVAFSNDGKTL-ASGSADHTVRLWNC-ETGSCVGILR 1024
Query: 231 GHRKTVTYIRFLDVDTLVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F L+ +G TD +KLW++ +S+ +T GH N V S G
Sbjct: 1025 GHSNRVHSVAFSPNGQLLASGSTDHTVKLWDIRESKCCKTLTGHTNWVLSVAFS--PDGK 1082
Query: 290 LLGCGSETNQVFVYDVRWGE 309
L GS V ++DV GE
Sbjct: 1083 TLSSGSADKTVRLWDVSTGE 1102
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 13/203 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G+ L SG D +V +D + + HG +V+SV +S L S D +++
Sbjct: 787 GKTLASGGGDHIVRLWDTSTNECL--KTLHGHSNQVFSVAFSPYGNTL-VCVSLDQKVKL 843
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD C G+C+ T + + + F G +L A+G D +D +
Sbjct: 844 WD--CQTGQCLKTWYGNTDWAMP--IAFSSDGHTL-ASGSNDYTVRVWDY-GTGSCIRTL 897
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V + F D TL + TD ++LW+V+ IRT GH + V S G
Sbjct: 898 PGHTDFVYSVAFSSDRKTLASGSTDNTIRLWDVSTGCCIRTLHGHTDWVFSVAFS--SDG 955
Query: 289 GLLGCGSETNQVFVYDVRWGEPV 311
L GS + V ++DV G +
Sbjct: 956 KTLASGSADHTVKLWDVSTGHCI 978
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS+D T+++WD G C+ T+ V V F +L A+G D +D
Sbjct: 875 ASGSNDYTVRVWDY--GTGSCIRTL--PGHTDFVYSVAFSSDRKTL-ASGSTDNTIRLWD 929
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
V + GH V + F D TL + D +KLW+V+ IRT++ H +
Sbjct: 930 VSTGC-CIRTLHGHTDWVFSVAFSSDGKTLASGSADHTVKLWDVSTGHCIRTFQEHTDRL 988
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V S G L GS + V +++ G V
Sbjct: 989 RSVAFS--NDGKTLASGSADHTVRLWNCETGSCV 1020
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 9/164 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L S D V +D+ + H V SV +S L + S D T+++W
Sbjct: 619 GKILASCSADHTVKFWDVSDGKCLKTCTGHTNE-VCSVAFSPDGKTL-VTSSGDHTLKVW 676
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + +C+ T + S V V F P G ++ A +D + + +
Sbjct: 677 DIKT--AECLKTC--TGHSSWVRSVAFSPDGKTI--ASSSDDHTVKFWDSGTGECLNTGT 730
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GHR V + F D TL + D +K W V+ R +RTY GH
Sbjct: 731 GHRDCVGSVAFTSDGKTLASGSGDHTVKFWEVSTGRCLRTYTGH 774
>gi|413919970|gb|AFW59902.1| hypothetical protein ZEAMMB73_759012 [Zea mays]
gi|413919971|gb|AFW59903.1| hypothetical protein ZEAMMB73_759012 [Zea mays]
Length = 808
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 23/261 (8%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ + ++ LK TS RVL +G D V + + K I H V SV +
Sbjct: 14 FVAHASNVNCLKIGRKTS-RVLVTGGEDHKVNLWAIGKPNSILSLSGHTSA-VESVGFDS 71
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ V A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G D
Sbjct: 72 TE-VFVAAGAASGTIKLWD--LEEAKIVRTL--TGHRSNCMSVDFHPFGE-FFASGSLDT 125
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D+R+ + + + GH + V IRF D +V+ G D +KLW++ +++ +K
Sbjct: 126 NLKIWDIRRK-NCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNIVKLWDLTAGKLLHEFK 184
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
H + H LL GS V +D + FE + + G E V S
Sbjct: 185 CHEGQIQCIDFHP--HEFLLATGSADKTVKFWD--------LETFELIGSTGPETTGVRS 234
Query: 332 VCWRRVGEDECTLVAGGSDGL 352
+ + G TL+ G + L
Sbjct: 235 MTFNPDGR---TLLCGLHESL 252
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V C++ S ++ G D K + + K + +L GH V + F +
Sbjct: 16 AHASNVNCLKIGRKTSRVLVTGGEDHKVNLWAIGK-PNSILSLSGHTSAVESVGFDSTEV 74
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH--GGLLGCGSETNQVFVY 303
V AG G +KLW++ +++++RT GH +N +SV H G GS + ++
Sbjct: 75 FVAAGAASGTIKLWDLEEAKIVRTLTGHRSN----CMSVDFHPFGEFFASGSLDTNLKIW 130
Query: 304 DVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
D+R +H + +G V R D +V+GG D ++ ++
Sbjct: 131 DIRRKN--CIHTY---------KGHTRGVNAIRFTPDGRWVVSGGEDNIVKLW 172
>gi|334117013|ref|ZP_08491105.1| WD40 repeat-containing protein [Microcoleus vaginatus FGP-2]
gi|333461833|gb|EGK90438.1| WD40 repeat-containing protein [Microcoleus vaginatus FGP-2]
Length = 706
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 116/248 (46%), Gaps = 22/248 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G++L SG YDG++ ++LE I H R S+ +S L SGS D T+++
Sbjct: 476 NGKILASGSYDGIIKLWNLENGQEIRTLKGH-SRLTRSLAFSPDGETL-VSGSYDHTVRL 533
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W+ + G+ + T+ + V V P G + +A+G DK + + K +
Sbjct: 534 WNLKT--GQEIRTL--TGHSDLVYSVAISPDGET-IASGSWDKTIKLWSL-KTRQEICTL 587
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
G+ ++V + F ++ +G+ D +KLWN+ + IRT GH + L + +G
Sbjct: 588 TGNSESVYSVAFSPDGQIIASGSGDNTIKLWNLKIKQEIRTLTGH--SHLVFSLVISPNG 645
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
++ GS N + +++++ G+ +H G + V R D TLV+G
Sbjct: 646 QIIASGSNDNTIKLWNLKTGQE--IHTLT---------GHSARVNSIRFSPDGHTLVSGS 694
Query: 349 SDGLLHVF 356
DG + ++
Sbjct: 695 CDGSIKIW 702
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 24/213 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P +G +R++N+K+ + + HS + +P
Sbjct: 513 LAFSPDGETLVSGSYDHTVRLWNLKT---GQEIRTLTGHSDLVYSVAISP---------- 559
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G + SG +D + + L+ + I V+SV +S ++ ASGS D T+
Sbjct: 560 --DGETIASGSWDKTIKLWSLKTRQEICTLT-GNSESVYSVAFSPDGQII-ASGSGDNTI 615
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ + + + T+ + V + P G ++A+G D +++ K +
Sbjct: 616 KLWNLKIK--QEIRTL--TGHSHLVFSLVISPNG-QIIASGSNDNTIKLWNL-KTGQEIH 669
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
GH V IRF D TLV+ DG +K+W
Sbjct: 670 TLTGHSARVNSIRFSPDGHTLVSGSCDGSIKIW 702
Score = 44.3 bits (103), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 178 KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD-KKAYAYDVRKMVDPVLVFDGHRKTV 236
KCV T+ S+V CV P G + + D K + +++ F GH V
Sbjct: 413 KCVKTLN-RVGNSSVNCVVISPDGKTFASDSSGDCSKIWNLQTGELIRS---FYGHLYEV 468
Query: 237 TYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
+ + ++ +G+ DG +KLWN+ + + IRT KGH +R L+ G L GS
Sbjct: 469 SCVAINPNGKILASGSYDGIIKLWNLENGQEIRTLKGH--SRLTRSLAFSPDGETLVSGS 526
Query: 296 ETNQVFVYDVRWGEPV 311
+ V +++++ G+ +
Sbjct: 527 YDHTVRLWNLKTGQEI 542
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+S+ + F P + A+G I+++N+K + + + HS + + +P
Sbjct: 591 SESVYSVAFSPDGQIIASGSGDNTIKLWNLK---IKQEIRTLTGHSHLVFSLVISP---- 643
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+G+++ SG D + ++L+ I H RV S+ +S L SG
Sbjct: 644 --------NGQIIASGSNDNTIKLWNLKTGQEIHTLTGHSA-RVNSIRFSPDGHTL-VSG 693
Query: 162 SDDGTMQMW 170
S DG++++W
Sbjct: 694 SCDGSIKIW 702
>gi|145476531|ref|XP_001424288.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391352|emb|CAK56890.1| unnamed protein product [Paramecium tetraurelia]
Length = 1180
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 92/378 (24%), Positives = 156/378 (41%), Gaps = 50/378 (13%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A ++++R C WD R SDS+ + F P ++ ATG I ++ +
Sbjct: 319 ASSSHDRTVCLWDVKTR----KKKLILEGHSDSVLAVSFSPDGTILATGSEDFSICLWEV 374
Query: 72 -----KSVLVDH--------------PVVAVVDHSKVCDYYICTPAKLSSLKWKP---GT 109
KS+L+ H + + + +C + + T + S L GT
Sbjct: 375 MTGLQKSILIGHDYAVYSVCFSPDGTTIASGSQDNSICLWDVKTGQQKSKLNGHDRIVGT 434
Query: 110 -----SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G +L SG D ++ +D++ + HG V S +S +L ASGS D
Sbjct: 435 VCFSPDGSILASGSDDRLICLWDVQTGEQKSKLVGHGNC-VSSACFSPNGTIL-ASGSYD 492
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
++ +WD + G + + P+ + +VC F P +SL A+GC+D + +D K
Sbjct: 493 NSIILWDVKI-GLQKHNLDGPNDAVLSVC---FSPDATSL-ASGCSDSSIHLWDA-KTGR 546
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
L +GH V + F D TL + G D ++LW+V + I GH V S
Sbjct: 547 QKLKLNGHNNVVMSVCFSPDGQTLASGGGDNSIRLWDVKSGQQISKLDGHSEWIQSVRFS 606
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
G LL S + ++DV+ G + + + +V ++C+ G +
Sbjct: 607 --PDGTLLASSSNDFSILLWDVKTG--------QQYSQLYGHQQWVQTICFSPDGTTLAS 656
Query: 344 LVAGGSDGLLHVFVGKKK 361
S L +V GK+K
Sbjct: 657 CSGDKSIRLWNVKTGKQK 674
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 118/269 (43%), Gaps = 26/269 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S I I F P + A+G + IR++++++ + HS+ +
Sbjct: 807 SSGILSICFSPDSATIASGSDDKSIRLWDVRT---GQQKLKFDGHSR----------GVL 853
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL + P +L SG D + +D++ + ++ D H VWSV +S L ASG
Sbjct: 854 SLCFSP--KDNILASGGRDMSICLWDVKTQQLKYKLDGHTNS-VWSVCFSPDGTAL-ASG 909
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++++W+ + K + +V V F P G++ +A+ DK ++V K
Sbjct: 910 SVDNSIRLWNLKIRQLK----FKLDGHTDSVWQVCFSPDGTT-IASSSKDKSIRLWNV-K 963
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+GH V + F D TL + D ++LWNV + + GH N N V
Sbjct: 964 TGQQKFKLNGHSNCVNSVCFSPDGITLASGSADNSIRLWNVRTGQQKQMLNGHSNQINSV 1023
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G L GS N + +++V+ G+
Sbjct: 1024 CFS--PDGSTLASGSSDNSIVLWNVQTGQ 1050
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 30/290 (10%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + + PN D++ + F P + A+G I +++ K+ +
Sbjct: 498 WDVKIGLQKHNLDGPN----DAVLSVCFSPDATSLASGCSDSSIHLWDAKT---GRQKLK 550
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H+ V + S+ + P G+ L SG D + +D++ I + D H
Sbjct: 551 LNGHNNV----------VMSVCFSP--DGQTLASGGGDNSIRLWDVKSGQQISKLDGHS- 597
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+ SV +S D L AS S+D ++ +WD + G+ S Q + V + F P G+
Sbjct: 598 EWIQSVRFSP-DGTLLASSSNDFSILLWDVKT--GQQYS--QLYGHQQWVQTICFSPDGT 652
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
+L A+ DK ++V+ ++ GH V I F D TL + G D + LW+V
Sbjct: 653 TL-ASCSGDKSIRLWNVKTGKQKSKLY-GHSSFVQTICFSFDGTTLASGGNDNAVFLWDV 710
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++I GH NR + + + LL G + N + ++DV+ G+ +
Sbjct: 711 KTEQLIYDLIGH--NRGILSVCFSPYNTLLVSGGQDNFILLWDVKTGQQI 758
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 37/302 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + A+ + IR+Y+++ VL P HS + + S+ + P +
Sbjct: 773 FSPDGTTLASCSHDKSIRLYDVEKVL-KQP--KFHGHS----------SGILSICFSPDS 819
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+ + SG D + +D+ + D H R V S+ +S D +L ASG D ++ +
Sbjct: 820 A--TIASGSDDKSIRLWDVRTGQQKLKFDGH-SRGVLSLCFSPKDNIL-ASGGRDMSICL 875
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + ++V V F P G++L A+G D +++ K+
Sbjct: 876 WDVKTQQLK----YKLDGHTNSVWSVCFSPDGTAL-ASGSVDNSIRLWNL-KIRQLKFKL 929
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
DGH +V + F D T+ ++ D ++LWNV + GH N N V S G
Sbjct: 930 DGHTDSVWQVCFSPDGTTIASSSKDKSIRLWNVKTGQQKFKLNGHSNCVNSVCFS--PDG 987
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
L GS N + +++VR G+ + + ++SVC+ D TL +G
Sbjct: 988 ITLASGSADNSIRLWNVRTGQQKQMLN--------GHSNQINSVCF---SPDGSTLASGS 1036
Query: 349 SD 350
SD
Sbjct: 1037 SD 1038
Score = 57.8 bits (138), Expect = 8e-06, Method: Composition-based stats.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 43/322 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++++ + F P S+ ++G + IR+++IKS L + + H IC
Sbjct: 261 TNNVNTVCFSPDGSIVSSGSDDQSIRLWDIKSGL---QIFRLYGHRDRV-ISICF----- 311
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ GR L S +D V +D++ + + H V +V +S +L A+G
Sbjct: 312 ------SSDGRTLASSSHDRTVCLWDVKTRKKKLILEGHSD-SVLAVSFSPDGTIL-ATG 363
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPS---ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
S+D ++ +W+ ++ +Q S AV V F P G++ +A+G D +D
Sbjct: 364 SEDFSICLWE-------VMTGLQKSILIGHDYAVYSVCFSPDGTT-IASGSQDNSICLWD 415
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLK-LWNVNDSRVIRTYKGHVNNR 277
V K +GH + V + F +++ +G+D L LW+V GH N
Sbjct: 416 V-KTGQQKSKLNGHDRIVGTVCFSPDGSILASGSDDRLICLWDVQTGEQKSKLVGHGNCV 474
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
+ S +G +L GS N + ++DV+ G + H+ + A V SVC+
Sbjct: 475 SSACFS--PNGTILASGSYDNSIILWDVKIG--LQKHNLDGPNDA------VLSVCF--- 521
Query: 338 GEDECTLVAGGSDGLLHVFVGK 359
D +L +G SD +H++ K
Sbjct: 522 SPDATSLASGCSDSSIHLWDAK 543
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P D++ A+GG I ++++K+ + + + D + +C + P
Sbjct: 857 FSPKDNILASGGRDMSICLWDVKTQQLKYKL----DGHTNSVWSVC---------FSP-- 901
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G L SG D + ++L+ + F+ D H VW V +S D AS S D ++++
Sbjct: 902 DGTALASGSVDNSIRLWNLKIRQLKFKLDGHTDS-VWQVCFSP-DGTTIASSSKDKSIRL 959
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W+ + K + + + V V F P G +L A+G AD ++VR ++
Sbjct: 960 WNVKTGQQK----FKLNGHSNCVNSVCFSPDGITL-ASGSADNSIRLWNVRTGQQKQML- 1013
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+GH + + F D TL + +D + LWNV + GH + N + S
Sbjct: 1014 NGHSNQINSVCFSPDGSTLASGSSDNSIVLWNVQTGQQQSQLNGHSDCINSICFS 1068
Score = 47.8 bits (112), Expect = 0.008, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 26/261 (9%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + +G IR++N+K+ + H+ + +P
Sbjct: 227 FSPDGNTLVSGSQDNSIRLWNVKT---GEQKSKLDGHTNNVNTVCFSP------------ 271
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G ++ SG D + +D++ + IF H RV S+ +S L AS S D T+ +
Sbjct: 272 DGSIVSSGSDDQSIRLWDIKSGLQIFRLYGHRD-RVISICFSSDGRTL-ASSSHDRTVCL 329
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + +V V F P G +++A G D ++V + ++
Sbjct: 330 WDVKTRKKKLIL----EGHSDSVLAVSFSPDG-TILATGSEDFSICLWEVMTGLQKSILI 384
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V + F D T+ + D + LW+V + GH +R + G
Sbjct: 385 -GHDYAVYSVCFSPDGTTIASGSQDNSICLWDVKTGQQKSKLNGH--DRIVGTVCFSPDG 441
Query: 289 GLLGCGSETNQVFVYDVRWGE 309
+L GS+ + ++DV+ GE
Sbjct: 442 SILASGSDDRLICLWDVQTGE 462
Score = 44.7 bits (104), Expect = 0.080, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
DGH + V + F D +TLV+ D ++LWNV GH NN N V S
Sbjct: 215 LDGHSQQVLSVCFSPDGNTLVSGSQDNSIRLWNVKTGEQKSKLDGHTNNVNTVCFS--PD 272
Query: 288 GGLLGCGSETNQVFVYDVRWG 308
G ++ GS+ + ++D++ G
Sbjct: 273 GSIVSSGSDDQSIRLWDIKSG 293
Score = 44.3 bits (103), Expect = 0.097, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 32/241 (13%)
Query: 130 KKVPIFERDEHGG--RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSA 187
K + I E ++ G ++V SV +S L SGS D ++++W+ + G+ S +
Sbjct: 205 KNMKIHELNKLDGHSQQVLSVCFSPDGNTL-VSGSQDNSIRLWNVKT--GEQKSKLDGHT 261
Query: 188 SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDT 246
+ C F P GS +V++G D+ +D++ + ++ GHR V I F D T
Sbjct: 262 NNVNTVC--FSPDGS-IVSSGSDDQSIRLWDIKSGLQIFRLY-GHRDRVISICFSSDGRT 317
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
L ++ D + LW+V + +GH + + + +S G +L GSE + +++V
Sbjct: 318 LASSSHDRTVCLWDVKTRKKKLILEGHSD--SVLAVSFSPDGTILATGSEDFSICLWEVM 375
Query: 307 WGEPVWV---HDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG---LLHVFVGKK 360
G + HD+ V SVC+ D T+ +G D L V G++
Sbjct: 376 TGLQKSILIGHDYA-----------VYSVCF---SPDGTTIASGSQDNSICLWDVKTGQQ 421
Query: 361 K 361
K
Sbjct: 422 K 422
Score = 40.0 bits (92), Expect = 1.8, Method: Composition-based stats.
Identities = 73/346 (21%), Positives = 137/346 (39%), Gaps = 83/346 (23%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P A+GG IR++++KS + + HS+ + S+++ P
Sbjct: 563 FSPDGQTLASGGGDNSIRLWDVKS---GQQISKLDGHSEW----------IQSVRFSP-- 607
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGSDDGTM 167
G +L S D ++ +D++ + + G + W ++ +S L AS S D ++
Sbjct: 608 DGTLLASSSNDFSILLWDVKTGQ---QYSQLYGHQQWVQTICFSPDGTTL-ASCSGDKSI 663
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ + GK S + +S C F G++L A+G D + +DV+ L
Sbjct: 664 RLWNVKT--GKQKSKLYGHSSFVQTICFSFD--GTTL-ASGGNDNAVFLWDVKT---EQL 715
Query: 228 VFD--GHRKTVTYIRFLDVDTL-VTAGTDGCLKLWNVND--------------------- 263
++D GH + + + F +TL V+ G D + LW+V
Sbjct: 716 IYDLIGHNRGILSVCFSPYNTLLVSGGQDNFILLWDVKTGQQISKLEYHKSTVYQLCFSP 775
Query: 264 -------------------SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
+V++ K H ++ + + + GS+ + ++D
Sbjct: 776 DGTTLASCSHDKSIRLYDVEKVLKQPKFHGHSSGILSICFSPDSATIASGSDDKSIRLWD 835
Query: 305 VRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
VR G+ D G RG V S+C+ + L +GG D
Sbjct: 836 VRTGQQKLKFD-------GHSRG-VLSLCF---SPKDNILASGGRD 870
>gi|394987157|gb|AFN42836.1| katanin-like protein [Marsilea vestita]
Length = 548
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 23/256 (8%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ + ++ LK TS RVL +G D V + + + PI H V SV +
Sbjct: 10 FVAHASNVNCLKIGKKTS-RVLVTGGEDAKVNMWAIGRPNPIMSLSGHSSA-VESVTFDA 67
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ L A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G D
Sbjct: 68 AE-ALVAAGAASGTIKLWD--LEEAKVVRTL--TGHRSNCIAVDFHPFGE-FFASGSLDT 121
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D+R+ + + GH + V ++F D +V+ G D +KLW++ +++ +K
Sbjct: 122 NLKIWDIRRK-GCIHTYKGHTRGVNVLKFSPDGRWVVSGGEDNIVKLWDLTAGKLMHDFK 180
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
H N L H LLG GS V +D+ FE + +AG E V S
Sbjct: 181 CHEGQINC--LDFHPHEFLLGTGSADRTVKFWDLE--------TFELIGSAGPEVSGVRS 230
Query: 332 VCWRRVGEDECTLVAG 347
+ + G+ TL+ G
Sbjct: 231 MIFNPDGQ---TLMVG 243
>gi|452822930|gb|EME29945.1| transducin family protein / WD-40 repeat family protein isoform 2
[Galdieria sulphuraria]
Length = 328
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 25/252 (9%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+S + W P + R L S D V+ +D+ HG V+ VD++ V+ A
Sbjct: 81 ISDISWSPDS--RCLVSASDDKWVILWDVRGNTRSRILKGHGNY-VFCVDFNPAGNVI-A 136
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD GK + + A AV F+ GS LV++G D +D
Sbjct: 137 SGSYDSSIRIWDS--GSGKSIHSFI--AHTPAVTAAHFNKDGSRLVSSG-YDGLCKIWDW 191
Query: 220 R-KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
R + +L + + ++++F + ++TA D L+LW+ + V++T+ GHVN+R
Sbjct: 192 RVGGCEKILRSEEYPAATSFVKFSPNGKYVLTASFDSKLRLWDYERNSVVKTFSGHVNSR 251
Query: 278 NFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGE-------------PVWVHDFEPVTAAG 323
+ V L+ CGSE N V+++D++ E V H EP+ A+G
Sbjct: 252 YCIFSTFVASRRPLIACGSENNFVYIWDLQTEEILQQLEAHVDVVLSVSSHPCEPLLASG 311
Query: 324 SERGFVSSVCWR 335
+ + WR
Sbjct: 312 ALEKDKTIKLWR 323
>gi|115482706|ref|NP_001064946.1| Os10g0494800 [Oryza sativa Japonica Group]
gi|78708845|gb|ABB47820.1| Katanin p80 WD40-containing subunit B1, putative, expressed [Oryza
sativa Japonica Group]
gi|113639555|dbj|BAF26860.1| Os10g0494800 [Oryza sativa Japonica Group]
Length = 875
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 18/182 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV + + ++GA G+ GT+++WD D K V T + RS+ ++FHPFG
Sbjct: 62 VESVSFDSSEAMIGA-GASSGTIKIWD--VDEAKVVRTF--TGHRSSCASLDFHPFGE-F 115
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
A+G +D +D+RK + + GH + + +RF D +V+ G+D +K+W++
Sbjct: 116 FASGSSDTNMKIWDMRKK-GCIHTYKGHTRRIDVLRFTPDGRWIVSGGSDNSVKIWDLTA 174
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
+++ ++ H N L H LL GS V +D + FE + ++G
Sbjct: 175 GKLLHDFRNHEGPINC--LDFHPHEFLLATGSADKTVKFWD--------LETFELIGSSG 224
Query: 324 SE 325
E
Sbjct: 225 PE 226
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 26/190 (13%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V CV+F S ++ G D+K + + K +L G V + F +
Sbjct: 14 AHASDVNCVKFGRKTSRILITGGEDQKVNLWAIGKP-SSILSLSGLTSPVESVSFDSSEA 72
Query: 247 LVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
++ AG + G +K+W+V++++V+RT+ GH + L G GS + ++D+
Sbjct: 73 MIGAGASSGTIKIWDVDEAKVVRTFTGH--RSSCASLDFHPFGEFFASGSSDTNMKIWDM 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG-----------LLH 354
R + +H + +G + R D +V+GGSD LLH
Sbjct: 131 R--KKGCIHTY---------KGHTRRIDVLRFTPDGRWIVSGGSDNSVKIWDLTAGKLLH 179
Query: 355 VFVGKKKPLS 364
F + P++
Sbjct: 180 DFRNHEGPIN 189
>gi|242761183|ref|XP_002340131.1| G-protein beta WD-40 repeats containing protein, putative
[Talaromyces stipitatus ATCC 10500]
gi|218723327|gb|EED22744.1| G-protein beta WD-40 repeats containing protein, putative
[Talaromyces stipitatus ATCC 10500]
Length = 1611
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 115/264 (43%), Gaps = 30/264 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P+ A+G + ++++++K+ + + HS + +P
Sbjct: 1063 VAFSPNGQTLASGSHDKTVKLWDVKT---GSELQTLQGHSDLVHSVAFSP---------- 1109
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGSDDG 165
G+ L SG D V +D++ E G W SV +S L ASGSDD
Sbjct: 1110 --DGQTLASGSRDETVKLWDIKTGS---ELQTLQGHSDWVDSVAFSPDGQTL-ASGSDDE 1163
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++WD + G + T+Q S V V F P G +L A+G D+ +DV K
Sbjct: 1164 TVKLWDVKT--GSELQTLQ--GHSSLVHSVAFSPDGQTL-ASGSRDETVKFWDV-KTGSE 1217
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ GH +V + F D TL + D +KLW+V ++T +GH + V S
Sbjct: 1218 LQTLQGHSGSVYSVAFSPDGQTLASGSRDETVKLWDVKTGSELQTLQGHSSLVYSVAFS- 1276
Query: 285 WRHGGLLGCGSETNQVFVYDVRWG 308
G L GS V ++DV+ G
Sbjct: 1277 -PDGQTLASGSRDETVKLWDVKTG 1299
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 21/230 (9%)
Query: 88 KVCDYYICTPAKLSSLKWKPGT--------SGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
K+CD + T ++L +L+ G+ G+ L SG +D V +D++ +
Sbjct: 998 KLCD--VKTGSELQTLQGHSGSVYSVAFSPDGQTLASGSHDKTVKLWDVKTGSELQTLQG 1055
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H V SV +S L ASGS D T+++WD + G + T+Q V V F P
Sbjct: 1056 HSSL-VHSVAFSPNGQTL-ASGSHDKTVKLWDVKT--GSELQTLQ--GHSDLVHSVAFSP 1109
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKL 258
G +L A+G D+ +D+ K + GH V + F D TL + D +KL
Sbjct: 1110 DGQTL-ASGSRDETVKLWDI-KTGSELQTLQGHSDWVDSVAFSPDGQTLASGSDDETVKL 1167
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
W+V ++T +GH + + V S G L GS V +DV+ G
Sbjct: 1168 WDVKTGSELQTLQGHSSLVHSVAFS--PDGQTLASGSRDETVKFWDVKTG 1215
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 24/244 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S S+ + F P A+G ++++++K+ + + HS +
Sbjct: 1309 SGSVYSVAFSPDGQTLASGSRDETVKLWDVKT---GSELQTLQGHS----------GSVY 1355
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L SG D V +D++ + H V SV +S L ASG
Sbjct: 1356 SVAFSP--DGQTLASGSDDETVKLWDVKTGSELQTLQGHSDS-VHSVAFSPNGQTL-ASG 1411
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD + G + T+Q V V F P G +L A+G D+ +DV K
Sbjct: 1412 SHDKTVKLWDVKT--GSELQTLQ--GHSHWVHSVAFSPDGQTL-ASGSRDETVKLWDV-K 1465
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ GH V + F D TLV+ D +KLW+V ++T +GH ++ + V
Sbjct: 1466 TGSELQTLQGHSSLVDSVAFSPDGQTLVSGSWDKTVKLWDVKTGSELQTLQGHSDSVDSV 1525
Query: 281 GLSV 284
++
Sbjct: 1526 AFTL 1529
>gi|452822929|gb|EME29944.1| transducin family protein / WD-40 repeat family protein isoform 1
[Galdieria sulphuraria]
Length = 312
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 25/252 (9%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+S + W P + R L S D V+ +D+ HG V+ VD++ V+ A
Sbjct: 65 ISDISWSPDS--RCLVSASDDKWVILWDVRGNTRSRILKGHGNY-VFCVDFNPAGNVI-A 120
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD GK + + A AV F+ GS LV++G D +D
Sbjct: 121 SGSYDSSIRIWDS--GSGKSIHSFI--AHTPAVTAAHFNKDGSRLVSSG-YDGLCKIWDW 175
Query: 220 R-KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
R + +L + + ++++F + ++TA D L+LW+ + V++T+ GHVN+R
Sbjct: 176 RVGGCEKILRSEEYPAATSFVKFSPNGKYVLTASFDSKLRLWDYERNSVVKTFSGHVNSR 235
Query: 278 NFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGE-------------PVWVHDFEPVTAAG 323
+ V L+ CGSE N V+++D++ E V H EP+ A+G
Sbjct: 236 YCIFSTFVASRRPLIACGSENNFVYIWDLQTEEILQQLEAHVDVVLSVSSHPCEPLLASG 295
Query: 324 SERGFVSSVCWR 335
+ + WR
Sbjct: 296 ALEKDKTIKLWR 307
>gi|315043951|ref|XP_003171351.1| WD repeat-containing protein 57 [Arthroderma gypseum CBS 118893]
gi|311343694|gb|EFR02897.1| WD repeat-containing protein 57 [Arthroderma gypseum CBS 118893]
Length = 360
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 127/308 (41%), Gaps = 37/308 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
FDP+ + A+ G+ R I ++ + +Y I T K + L +
Sbjct: 73 FDPAGHLIASSGMDRSILLWRT--------------YGNCENYGILTGHKGAVLDLQWSR 118
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
L S D + +DLE I +H V +D S+ L SGSDDG++ +
Sbjct: 119 DSNTLFSASADMTLASWDLESGTRIRRYMDHT-EIVNCLDISRRGQELLISGSDDGSIGI 177
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WDPR K S+S V V G+ + A G + + +D+RK +
Sbjct: 178 WDPRQ---KTAIDYLESSSAMPVTAVAISEAGNEIYAGGI-ENDIHVWDIRKRAVTYSMI 233
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHVN--NRNFVGL 282
GH T++ ++ D TL++ D + W++ R IRT+ G +N +
Sbjct: 234 -GHTDTISSLQISPDSQTLLSNSHDSTARTWDIRPFAPADRHIRTFDGAPTGLEKNLIRA 292
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDEC 342
S G ++ GS V V+DV+ G+ ++ +G V+ V R DE
Sbjct: 293 SWDAKGEMIAAGSGDRSVVVWDVKTGKLLY--------KLPGHKGTVNDV--RFTPADEP 342
Query: 343 TLVAGGSD 350
+V+G SD
Sbjct: 343 IIVSGSSD 350
>gi|222613070|gb|EEE51202.1| hypothetical protein OsJ_32015 [Oryza sativa Japonica Group]
Length = 875
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 18/182 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV + + ++GA G+ GT+++WD D K V T + RS+ ++FHPFG
Sbjct: 62 VESVSFDSSEAMIGA-GASSGTIKIWD--VDEAKVVRTF--TGHRSSCASLDFHPFGE-F 115
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
A+G +D +D+RK + + GH + + +RF D +V+ G+D +K+W++
Sbjct: 116 FASGSSDTNMKIWDMRKK-GCIHTYKGHTRRIDVLRFTPDGRWIVSGGSDNSVKIWDLTA 174
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
+++ ++ H N L H LL GS V +D + FE + ++G
Sbjct: 175 GKLLHDFRNHEGPINC--LDFHPHEFLLATGSADKTVKFWD--------LETFELIGSSG 224
Query: 324 SE 325
E
Sbjct: 225 PE 226
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 26/190 (13%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V CV+F S ++ G D+K + + K +L G V + F +
Sbjct: 14 AHASDVNCVKFGRKTSRILITGGEDQKVNLWAIGKP-SSILSLSGLTSPVESVSFDSSEA 72
Query: 247 LVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
++ AG + G +K+W+V++++V+RT+ GH + L G GS + ++D+
Sbjct: 73 MIGAGASSGTIKIWDVDEAKVVRTFTGH--RSSCASLDFHPFGEFFASGSSDTNMKIWDM 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG-----------LLH 354
R + +H + +G + R D +V+GGSD LLH
Sbjct: 131 R--KKGCIHTY---------KGHTRRIDVLRFTPDGRWIVSGGSDNSVKIWDLTAGKLLH 179
Query: 355 VFVGKKKPLS 364
F + P++
Sbjct: 180 DFRNHEGPIN 189
>gi|218442436|ref|YP_002380757.1| hypothetical protein PCC7424_5355 [Cyanothece sp. PCC 7424]
gi|218175207|gb|ACK73938.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
Length = 1411
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 36/249 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+DS+ + F P+D A+G ++R++N+++ + + H+ + +P
Sbjct: 1127 TDSVWSVAFSPNDHWLASGCEDGQVRLWNLET----GNYILLKGHNNRVRIVVFSP---- 1178
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFER--DEHGG--RRVWSVDYSKGDPVL 157
G+ L G D V+ +++E IF++ +EH G RRV S+ +S D
Sbjct: 1179 --------DGKWLAGGGNDRSVILWNVETG-EIFQKLDEEHNGHQRRVLSITFSS-DGQF 1228
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQP----SASRSAVCCVEFHPFGSSLVAAGCADKK 213
AS S D T+++WD T+ P + + V + F P S+L+ +G DK
Sbjct: 1229 IASSSRDQTIRVWDLNS------PTIGPMVILNEHKDQVHSIAFSPQDSNLLVSGSFDKT 1282
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRV--IRTY 270
+DV + + F+GH+K V + F +V + G D ++LW++N + + + +
Sbjct: 1283 VKLWDVANS-NVIKTFEGHKKGVLSVAFAPNGQIVASGGHDQTIRLWDINGNHLSNLEGH 1341
Query: 271 KGHVNNRNF 279
KG V + F
Sbjct: 1342 KGAVESMVF 1350
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L SG DG V ++LE I + + RV V +S L A G +D ++ +W+
Sbjct: 1142 LASGCEDGQVRLWNLETGNYILLKGHNN--RVRIVVFSPDGKWL-AGGGNDRSVILWN-- 1196
Query: 174 CDGGKCVSTV--QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK-MVDPVLVFD 230
+ G+ + + + + V + F G +A+ D+ +D+ + P+++ +
Sbjct: 1197 VETGEIFQKLDEEHNGHQRRVLSITFSSDGQ-FIASSSRDQTIRVWDLNSPTIGPMVILN 1255
Query: 231 GHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
H+ V I F D + LV+ D +KLW+V +S VI+T++GH + + ++ +G
Sbjct: 1256 EHKDQVHSIAFSPQDSNLLVSGSFDKTVKLWDVANSNVIKTFEGH--KKGVLSVAFAPNG 1313
Query: 289 GLLGCGSETNQVFVYDV 305
++ G + ++D+
Sbjct: 1314 QIVASGGHDQTIRLWDI 1330
Score = 46.6 bits (109), Expect = 0.020, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 20/204 (9%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
+L +G +G V Y++ + + +H + S+ ++ + L A+ S+DGT+ WD
Sbjct: 915 ILATGSQNGTVSLYNV-RSAKQLGQSKHHNEIIRSLSFNPTNDTL-ATASEDGTVHFWDI 972
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG--CADKKAYAYDVR-----KMVDP 225
G V + + F G L D+ Y+VR
Sbjct: 973 ---GNLSSYQVLKDPFMRKIWALSFSQDGKFLATGSLDSNDRGPEEYNVRLWELSSYTTE 1029
Query: 226 VLVFDGHRKTVTYIRFL----DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
VL H K + + F D LV+ G D +K WNV + + +T +G RN +
Sbjct: 1030 VLKGHRHSKQLRCLAFCPNPNQSDLLVSGGDDRSIKFWNVTEHKCEKTVQGF---RNRIW 1086
Query: 282 LSVWRH-GGLLGCGSETNQVFVYD 304
V+ ++ C SE NQ+ +++
Sbjct: 1087 SVVFNFTNSMIACSSEDNQIHLWN 1110
Score = 38.1 bits (87), Expect = 6.0, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 10/167 (5%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
+VW+V + + SGS+DGT+++W + ++ +S+V + F G
Sbjct: 811 QVWAVAFHPKKNLF-VSGSEDGTVRLWRWDEENAHSPQNLESQQLQSSVRAIAFSRDGGF 869
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHR-KTVTYIRFL----DVDTLVTAGTDGCLKL 258
L A D+ +D R P+ F+ V+ I F +V L T +G + L
Sbjct: 870 LAIAN--DQCITLWDFRGDDTPIKYFNTLPIAEVSAIAFAQTKDNVSILATGSQNGTVSL 927
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+NV ++ + K H N LS L SE V +D+
Sbjct: 928 YNVRSAKQLGQSKHH--NEIIRSLSFNPTNDTLATASEDGTVHFWDI 972
>gi|422303058|ref|ZP_16390412.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 9806]
gi|389792037|emb|CCI12210.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 9806]
Length = 1246
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D I + F P +G + IR+++ +S V+ ++ DY++
Sbjct: 918 TDWICSVAFSPDGKTLISGSGDQTIRLWSGES----GKVIQILQEK---DYWVLLHQVAV 970
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S +G+++ S +D + +D+ EH +RVW++ +S +L SG
Sbjct: 971 S------ANGQLIASTSHDNTIKLWDIRTDEKYTFSPEHQ-KRVWAIAFSPNSQML-VSG 1022
Query: 162 SDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++W PR G C+ T + ++ V V F G L+A G D+ + +
Sbjct: 1023 SGDNSVKLWSVPR---GFCLKTFE--EHQAWVLSVNFSLDGK-LIATGSEDRTIKLWSIE 1076
Query: 221 K-MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
M + F GH+ + + F D L ++ D +K+W V D R+I +++ H +
Sbjct: 1077 DDMTQSLRTFKGHQGRIWSVVFSPDGQRLASSSDDQTVKVWQVKDGRLINSFEDHKSWVW 1136
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL G + + ++DV G+
Sbjct: 1137 SVAFS--PDGKLLASGGDDATIRIWDVETGQ 1165
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 9/153 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQM 169
G+++ +G D + + +E + R G + R+WSV +S L AS SDD T+++
Sbjct: 1058 GKLIATGSEDRTIKLWSIEDDMTQSLRTFKGHQGRIWSVVFSPDGQRL-ASSSDDQTVKV 1116
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + G+ +++ + +S V V F P G L+A+G D +DV L+
Sbjct: 1117 W--QVKDGRLINSFEDH--KSWVWSVAFSPDGK-LLASGGDDATIRIWDVETGQLHQLLC 1171
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+ H K+V + F + +TL +AG D +KLWN+
Sbjct: 1172 E-HTKSVRSVCFSPNGNTLASAGEDETIKLWNL 1203
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 57/232 (24%), Positives = 98/232 (42%), Gaps = 23/232 (9%)
Query: 113 VLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+L +GD G++ + +++ K+ + + G VWSV + +L ASG DG +++W
Sbjct: 627 LLATGDSHGMIYLWKVKQDGKLELSKSFPAHGSWVWSVALNSEGQLL-ASGGQDGIVKIW 685
Query: 171 DPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D C S PS A S +A G DK + V + + +
Sbjct: 686 SITTDISINCHSLPHPSQKHYAPIRAVTFSADSKFLATGSEDKTIKIWSV-ETGECLHTL 744
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH++ V + F L+ +G+ D +K+W+V+ + T GH + V S G
Sbjct: 745 EGHQERVGGVAFNPNGQLLASGSADKTIKIWSVDTGECLHTLTGHQDWVWQVAFS--SDG 802
Query: 289 GLLGCGSETNQVFVYDVRWGEP------------VWVHDFEP---VTAAGSE 325
LL GS + ++ + G+ +W F P A+GSE
Sbjct: 803 QLLASGSGDKTIKIWSIIEGKYQNIDTLTGHESWIWSVAFSPDGQYIASGSE 854
Score = 46.6 bits (109), Expect = 0.021, Method: Composition-based stats.
Identities = 59/290 (20%), Positives = 119/290 (41%), Gaps = 38/290 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ +G + F+P+ + A+G + I+I+++ + H + D
Sbjct: 749 ERVGGVAFNPNGQLLASGSADKTIKIWSVDTGECLHTLTGHQD----------------- 791
Query: 103 LKWKPGTS--GRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W+ S G++L SG D + + +E K + +WSV +S D A
Sbjct: 792 WVWQVAFSSDGQLLASGSGDKTIKIWSIIEGKYQNIDTLTGHESWIWSVAFSP-DGQYIA 850
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+D T+++W + +C+ + +R + + F S + +G D+ + +
Sbjct: 851 SGSEDFTLRLWSVKTR--ECLQCFRGYGNR--LSSITFST-DSQYILSGSIDRSIRLWSI 905
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + +GH + + F D TL++ D ++LW+ +VI+ +
Sbjct: 906 KNH-KCLQQINGHTDWICSVAFSPDGKTLISGSGDQTIRLWSGESGKVIQILQEKDYWVL 964
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
++V +G L+ S N + ++D+R E VW F P
Sbjct: 965 LHQVAVSANGQLIASTSHDNTIKLWDIRTDEKYTFSPEHQKRVWAIAFSP 1014
>gi|413919972|gb|AFW59904.1| hypothetical protein ZEAMMB73_759012 [Zea mays]
Length = 910
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 23/261 (8%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ + ++ LK TS RVL +G D V + + K I H V SV +
Sbjct: 14 FVAHASNVNCLKIGRKTS-RVLVTGGEDHKVNLWAIGKPNSILSLSGHTSA-VESVGFDS 71
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ V A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G D
Sbjct: 72 TE-VFVAAGAASGTIKLWD--LEEAKIVRTL--TGHRSNCMSVDFHPFGE-FFASGSLDT 125
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D+R+ + + + GH + V IRF D +V+ G D +KLW++ +++ +K
Sbjct: 126 NLKIWDIRRK-NCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNIVKLWDLTAGKLLHEFK 184
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
H + H LL GS V +D + FE + + G E V S
Sbjct: 185 CHEGQIQCIDFHP--HEFLLATGSADKTVKFWD--------LETFELIGSTGPETTGVRS 234
Query: 332 VCWRRVGEDECTLVAGGSDGL 352
+ + G TL+ G + L
Sbjct: 235 MTFNPDGR---TLLCGLHESL 252
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V C++ S ++ G D K + + K + +L GH V + F +
Sbjct: 16 AHASNVNCLKIGRKTSRVLVTGGEDHKVNLWAIGK-PNSILSLSGHTSAVESVGFDSTEV 74
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH--GGLLGCGSETNQVFVY 303
V AG G +KLW++ +++++RT GH +N +SV H G GS + ++
Sbjct: 75 FVAAGAASGTIKLWDLEEAKIVRTLTGHRSN----CMSVDFHPFGEFFASGSLDTNLKIW 130
Query: 304 DVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHV 355
D+R +H + +G V R D +V+GG D ++ +
Sbjct: 131 DIRRKN--CIHTY---------KGHTRGVNAIRFTPDGRWVVSGGEDNIVKL 171
>gi|255545317|ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus communis]
gi|223547170|gb|EEF48666.1| katanin P80 subunit, putative [Ricinus communis]
Length = 803
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEH-GGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G S D S+ VL A+G+ GT++
Sbjct: 23 SSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTSGIDSVSFDSSE---VLVAAGAASGTIK 79
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V+FHPFG A+G D +D+RK +
Sbjct: 80 LWD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 133
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V IRF D +V+ G D +KLW++ +++ +K H + H
Sbjct: 134 YKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQVQCIDFH--PH 191
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL G ++ + W + FE + +AG E
Sbjct: 192 EFLLATGDSADRTVKF---WD----LETFELIGSAGPE 222
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S+V C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 9 AHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLSGHTSGIDSVSFDSSEV 67
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 68 LVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 125
Query: 306 R 306
R
Sbjct: 126 R 126
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 35/237 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSLKWK 106
++F P FA+G + ++I++I+ K C + Y ++++++
Sbjct: 102 VDFHPFGEFFASGSLDTNLKIWDIR--------------KKGCIHTYKGHTRGVNAIRFT 147
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + SG D V +DL + + H G +V +D+ + +L S D T
Sbjct: 148 P--DGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEG-QVQCIDFHPHEFLLATGDSADRT 204
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
++ WD + + + + P + V C+ F+P G +L+ + K ++++ + D V
Sbjct: 205 VKFWD--LETFELIGSAGPET--TGVRCLTFNPDGRTLLCGLHENLKVFSWEPLRCHDAV 260
Query: 227 LVFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V + R D++ L + C+ +W V+ SR+ +VN N
Sbjct: 261 --------DVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISRIEPYSPSNVNRLN 309
>gi|145357786|ref|NP_568194.2| katanin p80 subunit-like protein [Arabidopsis thaliana]
gi|332003911|gb|AED91294.1| katanin p80 subunit-like protein [Arabidopsis thaliana]
Length = 839
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G + D S+G L A+G+ GT++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEG---LVAAGAASGTIK 84
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V FHPFG A+G D +D+RK +
Sbjct: 85 LWD--LEEAKVVRTL--TGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 138
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V +RF D +V+ G D +K+W++ +++ +K H L H
Sbjct: 139 YKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG--KIQSLDFHPH 196
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V +D + FE + + G+E
Sbjct: 197 EFLLATGSADKTVKFWD--------LETFELIGSGGTE 226
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A +AV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDASEG 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++V+RT GH N V ++ G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKVVRTLTGH--RSNCVSVNFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H + +G V R D +V+GG D ++ V+
Sbjct: 131 R--KKGCIHTY---------KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 170
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 37/189 (19%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P FA+G + ++I++I+ H H++ + TP
Sbjct: 107 VNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG---HTRGVNVLRFTP---------- 153
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D VV +DL + E H G ++ S+D+ + +L A+GS D T+
Sbjct: 154 --DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG-KIQSLDFHPHEFLL-ATGSADKTV 209
Query: 168 QMWDPRC-----DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
+ WD GG + V+ C+ F+P G S++ K +++
Sbjct: 210 KFWDLETFELIGSGGTETTGVR---------CLTFNPDGKSVLCGLQESLKIFSW----- 255
Query: 223 VDPVLVFDG 231
+P+ DG
Sbjct: 256 -EPIRCHDG 263
>gi|110742137|dbj|BAE98997.1| katanin p80 subunit - like protein [Arabidopsis thaliana]
Length = 839
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQ 168
S RVL +G D V + + K I H G + D S+G L A+G+ GT++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEG---LVAAGAASGTIK 84
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K V T+ + RS V FHPFG A+G D +D+RK +
Sbjct: 85 LWD--LEEAKVVRTL--TGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHT 138
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ GH + V +RF D +V+ G D +K+W++ +++ +K H L H
Sbjct: 139 YKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG--KIQSLDFHPH 196
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V +D + FE + + G+E
Sbjct: 197 EFLLATGSADKTVKFWD--------LETFELIGSGGTE 226
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A +AV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDASEG 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++V+RT GH N V ++ G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKVVRTLTGH--RSNCVSVNFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H + +G V R D +V+GG D ++ V+
Sbjct: 131 R--KKGCIHTY---------KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 170
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 37/189 (19%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P FA+G + ++I++I+ H H++ + TP
Sbjct: 107 VNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG---HTRGVNVLRFTP---------- 153
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D VV +DL + E H G ++ S+D+ + +L A+GS D T+
Sbjct: 154 --DGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG-KIQSLDFHPHEFLL-ATGSADKTV 209
Query: 168 QMWDPRC-----DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
+ WD GG + V+ C+ F+P G S++ K +++
Sbjct: 210 KFWDLETFELIGSGGTETTGVR---------CLTFNPDGKSVLCGLQESLKIFSW----- 255
Query: 223 VDPVLVFDG 231
+P+ DG
Sbjct: 256 -EPIRCHDG 263
>gi|326432552|gb|EGD78122.1| hypothetical protein PTSG_09000 [Salpingoeca sp. ATCC 50818]
Length = 575
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 24/230 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P+ ++ +GG R IRI+++ + + V+D S C +KW P
Sbjct: 21 VDFHPAANMLVSGGFDRTIRIWDVD----EKAALRVIDRSAHAGPVTC-------VKWHP 69
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGT 166
+G ++ S D +D + EH G W + S D A+ S D T
Sbjct: 70 --NGALIASTSSDNTTCLWDASTGERMRILREHFG---WVLQCSFAPDRTKLATASWDKT 124
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG--SSLVAAGCADKKAYAYDVRKMVD 224
+++WDP + G+ +ST++ V EF+P G S+L+A+G D A +D R
Sbjct: 125 VRLWDP--NTGELISTLR--GHTKGVWACEFYPVGHTSALLASGGEDATARLWDTRTRKV 180
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGH 273
+ + GH V + + + +LV G+ D + +W+ +++R K H
Sbjct: 181 ALTLSGGHADAVYSVAWSNDGSLVATGSADRTVTIWDPKAGKILRLLKAH 230
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 86/212 (40%), Gaps = 32/212 (15%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
SVD+ +L SG D T+++WD D + + SA V CV++HP G+ L+A
Sbjct: 20 SVDFHPAANML-VSGGFDRTIRIWD--VDEKAALRVIDRSAHAGPVTCVKWHPNGA-LIA 75
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSR 265
+ +D +D + + + H V F D L TA D ++LW+ N
Sbjct: 76 STSSDNTTCLWDA-STGERMRILREHFGWVLQCSFAPDRTKLATASWDKTVRLWDPNTGE 134
Query: 266 VIRTYKGHVNNRNFVGLSVW--------RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
+I T +GH VW LL G E ++D R +
Sbjct: 135 LISTLRGHTKG-------VWACEFYPVGHTSALLASGGEDATARLWDTRTRKVA------ 181
Query: 318 PVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
+T +G V SV W G +LVA GS
Sbjct: 182 -LTLSGGHADAVYSVAWSNDG----SLVATGS 208
>gi|119512022|ref|ZP_01631117.1| Serine/Threonine protein kinase with WD40 repeats [Nodularia
spumigena CCY9414]
gi|119463312|gb|EAW44254.1| Serine/Threonine protein kinase with WD40 repeats [Nodularia
spumigena CCY9414]
Length = 511
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 28/263 (10%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A +N++ W+ + +++ + SD + + P A+G I+++N+
Sbjct: 249 ASGSNDKTIKLWNLQTQGEIATLTGH----SDWVSSVAISPDGRTLASGSSDNTIKLWNL 304
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
++ + HS+ +P GR L SG D + ++L+ +
Sbjct: 305 QT---QQQIATFTGHSEGVSSVAISP------------DGRTLASGSSDNTIKLWNLQTQ 349
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
I H VWSV S L ASGSDD T+++W+ + G T A RS
Sbjct: 350 QQIATFTGHS-EWVWSVAISPDGRTL-ASGSDDKTIKLWNLQTQGEIATLTGHSQAVRS- 406
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V P G +L A+G DK ++++ + + H ++V + D TL +
Sbjct: 407 ---VAISPDGRTL-ASGSDDKTIKLWNLQTQGE-IATLTRHSESVLSVAISPDGRTLASG 461
Query: 251 GTDGCLKLWNVNDSRVIRTYKGH 273
D +KLWN+ I T+ GH
Sbjct: 462 SGDWTIKLWNLQTQGEIATFTGH 484
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V V P G +L A+G DK ++++ + + GH V+ + D TL +
Sbjct: 236 VRSVAISPDGRTL-ASGSNDKTIKLWNLQTQGE-IATLTGHSDWVSSVAISPDGRTLASG 293
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+D +KLWN+ + I T+ GH + V +S G L GS N + +++++
Sbjct: 294 SSDNTIKLWNLQTQQQIATFTGHSEGVSSVAIS--PDGRTLASGSSDNTIKLWNLQ 347
>gi|359497299|ref|XP_002266048.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Vitis vinifera]
Length = 545
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 28/245 (11%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
R+L SG D V + + K + H V SV + + VL A+G+ G +++WD
Sbjct: 40 RLLISGGDDHKVNLWAIGKPTSLMSLCGHTSP-VESVTFDSAE-VLVAAGASTGVIKLWD 97
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
+ K V T+ + RS VEFHPFG A+G D +D+RK + + G
Sbjct: 98 --LEEAKMVRTL--TGHRSNCTAVEFHPFG-EFFASGSLDTNLKVWDIRKK-GCIHTYKG 151
Query: 232 HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK---GHVNNRNFVGLSVWRH 287
H + ++ IRF D +V+ G D +K+W++ +++ +K GH+ + +F L
Sbjct: 152 HTRGISTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF--- 208
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS V +D+ FE + +A E V S+ + G TL G
Sbjct: 209 --LLATGSADRTVKFWDLE--------TFELIGSARPEATGVRSITFHPDGR---TLFCG 255
Query: 348 GSDGL 352
D L
Sbjct: 256 LDDSL 260
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+EF P FA+G + +++++I+ H Y +S++++ P
Sbjct: 117 VEFHPFGEFFASGSLDTNLKVWDIRKKGCIHT-------------YKGHTRGISTIRFTP 163
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG +D VV +DL + + H G + S+D+ + +L A+GS D T+
Sbjct: 164 --DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG-HIRSIDFHPLEFLL-ATGSADRTV 219
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+ WD + + + + +P A + V + FHP G +L K Y+++
Sbjct: 220 KFWD--LETFELIGSARPEA--TGVRSITFHPDGRTLFCGLDDSLKVYSWE 266
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A + V C+ L+ +G D K + + K ++ GH V + F +
Sbjct: 24 AHTTNVNCLNIGKKACRLLISGGDDHKVNLWAIGKPTS-LMSLCGHTSPVESVTFDSAEV 82
Query: 247 LVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG + G +KLW++ +++++RT GH +N V + G GS + V+D+
Sbjct: 83 LVAAGASTGVIKLWDLEEAKMVRTLTGHRSNCTAVEFHPF--GEFFASGSLDTNLKVWDI 140
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H ++ G RG +S++ R D +V+GG D ++ V+
Sbjct: 141 R--KKGCIHTYK-----GHTRG-ISTI---RFTPDGRWVVSGGFDNVVKVW 180
>gi|430814241|emb|CCJ28500.1| unnamed protein product [Pneumocystis jirovecii]
Length = 481
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 52/259 (20%)
Query: 43 DSIGVIEFDPSDSV---------FATGGIARKIRIYNIKSVLVDHPVVAVVDH-SKVCDY 92
D IG I ++P ++ TGG I ++N+KS + P+ + H ++VC
Sbjct: 214 DKIGGITWNPGATIGGVSEEAVNIVTGGSEGDICLWNLKS---ETPISTLKGHENRVC-- 268
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
+++ P SG +GS +DG +DL + + ++ H R V+++ + +
Sbjct: 269 ---------RVEFHP--SGNYIGSASFDGTWRLWDLTTTMELLRQEGHS-REVYAISF-Q 315
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
D L +SG D ++WD R G+ + + + ++F P G +A+G AD
Sbjct: 316 NDGALVSSGGLDAVGRVWDLRT--GRTIMNLDGHIK--PIQSLDFSPNGYQ-IASGSADD 370
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD------------------TLVTAGTDG 254
+D+RK + PV H+ V+ +RF LV++G DG
Sbjct: 371 TIKIWDIRK-IKPVSTIPAHKSLVSDVRFFKTAHEEVLVQGKELIPSTSGIYLVSSGYDG 429
Query: 255 CLKLWNVNDSRVIRTYKGH 273
+ +W+ +D +I++ GH
Sbjct: 430 KINIWSSDDWILIKSLAGH 448
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 33/272 (12%)
Query: 10 PQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIY 69
P + N R + L+T VS S A +G+ F P+ A+G + ++Y
Sbjct: 143 PLMKIVNHRKTI--NKRLKTYVSMGSQIGA--DRPVGIARFSPNSQYIASGSWSGTCKLY 198
Query: 70 NIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPG-TSGRV------LGSGDYDGV 122
++ + + +D K+ + W PG T G V + +G +G
Sbjct: 199 SVPDLEEKYKFRGHID-------------KIGGITWNPGATIGGVSEEAVNIVTGGSEGD 245
Query: 123 VMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVST 182
+ ++L+ + PI H R V V++ +G S S DGT ++WD +
Sbjct: 246 ICLWNLKSETPISTLKGHENR-VCRVEFHPSGNYIG-SASFDGTWRLWDLTT----TMEL 299
Query: 183 VQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL 242
++ V + F G+ LV++G D +D+R ++ DGH K + + F
Sbjct: 300 LRQEGHSREVYAISFQNDGA-LVSSGGLDAVGRVWDLRTG-RTIMNLDGHIKPIQSLDFS 357
Query: 243 DVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGH 273
+ +G+ D +K+W++ + + T H
Sbjct: 358 PNGYQIASGSADDTIKIWDIRKIKPVSTIPAH 389
>gi|423066783|ref|ZP_17055573.1| serine/threonine protein kinase with WD40 repeat protein
[Arthrospira platensis C1]
gi|406711808|gb|EKD07007.1| serine/threonine protein kinase with WD40 repeat protein
[Arthrospira platensis C1]
Length = 618
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 28/267 (10%)
Query: 47 VIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWK 106
+ P A+G + +R++++++ +H + + H + +P
Sbjct: 340 TVAITPDGKTLASGSDDKTVRLWSLQTF--EH-LSTLTGHGGAINSIAISP--------- 387
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
GRV+ SG D V +DL K I H R + ++ +S+ L ASGS D T
Sbjct: 388 ---DGRVIASGSRDNTVKLWDLHSKQEIATLKGHE-RDITTIAFSRDGQTL-ASGSHDHT 442
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV--RKMVD 224
+ +W + + T++ + V F P G L+A+ D +D+ R+ +
Sbjct: 443 ITLW--YLGTNELIGTLR--GHNREIRAVAFSPNGR-LLASASQDNTVKLWDLNRREEIS 497
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+L D + + R D TL++ +D LKLW+V V+ T GH ++ ++V
Sbjct: 498 TLLSHDNSVNAIAFSR--DGQTLISGSSDKTLKLWDVTTKEVMATLHGH--SQAIKSIAV 553
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPV 311
G ++ G + + V ++D++ E +
Sbjct: 554 SPDGRIIASGGDDDTVQLWDLKNQEAI 580
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 20/199 (10%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGSDD T+++W + + +ST+ + A+ + P G ++A+G D +D
Sbjct: 351 ASGSDDKTVRLWSLQT--FEHLSTL--TGHGGAINSIAISPDG-RVIASGSRDNTVKLWD 405
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + + GH + +T I F D TL + D + LW + + +I T +GH NR
Sbjct: 406 LHSKQE-IATLKGHERDITTIAFSRDGQTLASGSHDHTITLWYLGTNELIGTLRGH--NR 462
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
++ +G LL S+ N V ++D ++ E ++ S V+++ + R
Sbjct: 463 EIRAVAFSPNGRLLASASQDNTVKLWD--------LNRREEISTLLSHDNSVNAIAFSRD 514
Query: 338 GEDECTLVAGGSDGLLHVF 356
G+ TL++G SD L ++
Sbjct: 515 GQ---TLISGSSDKTLKLW 530
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG +D + + L I H R + +V +S +L AS S D T+++W
Sbjct: 431 GQTLASGSHDHTITLWYLGTNELIGTLRGHN-REIRAVAFSPNGRLL-ASASQDNTVKLW 488
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + + +ST+ + ++V + F G +L++ G +DK +DV + +
Sbjct: 489 D--LNRREEISTLL--SHDNSVNAIAFSRDGQTLIS-GSSDKTLKLWDVTTK-EVMATLH 542
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH + + I D + + G D ++LW++ + I T +G + + S R
Sbjct: 543 GHSQAIKSIAVSPDGRIIASGGDDDTVQLWDLKNQEAIATLRGPSSKIEAIAFSPKR--P 600
Query: 290 LLGCGSETNQVFVYDV 305
LL GS + ++ +
Sbjct: 601 LLVSGSHNRNLEIWQI 616
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+GR+L S D V +DL ++ I H V ++ +S+ L SGS D T+++
Sbjct: 472 NGRLLASASQDNTVKLWDLNRREEISTLLSHDN-SVNAIAFSRDGQTL-ISGSSDKTLKL 529
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + ++T+ A+ + P G ++A+G D +D++ + +
Sbjct: 530 WD--VTTKEVMATLH--GHSQAIKSIAVSPDG-RIIASGGDDDTVQLWDLKNQ-EAIATL 583
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
G + I F L+ +G+ + L++W + D
Sbjct: 584 RGPSSKIEAIAFSPKRPLLVSGSHNRNLEIWQIPD 618
>gi|296088927|emb|CBI38493.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 28/245 (11%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
R+L SG D V + + K + H V SV + + VL A+G+ G +++WD
Sbjct: 29 RLLISGGDDHKVNLWAIGKPTSLMSLCGHTSP-VESVTFDSAE-VLVAAGASTGVIKLWD 86
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
+ K V T+ + RS VEFHPFG A+G D +D+RK + + G
Sbjct: 87 --LEEAKMVRTL--TGHRSNCTAVEFHPFG-EFFASGSLDTNLKVWDIRKK-GCIHTYKG 140
Query: 232 HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK---GHVNNRNFVGLSVWRH 287
H + ++ IRF D +V+ G D +K+W++ +++ +K GH+ + +F L
Sbjct: 141 HTRGISTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEF--- 197
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS V +D+ FE + +A E V S+ + G TL G
Sbjct: 198 --LLATGSADRTVKFWDLE--------TFELIGSARPEATGVRSITFHPDGR---TLFCG 244
Query: 348 GSDGL 352
D L
Sbjct: 245 LDDSL 249
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+EF P FA+G + +++++I+ H Y +S++++ P
Sbjct: 106 VEFHPFGEFFASGSLDTNLKVWDIRKKGCIHT-------------YKGHTRGISTIRFTP 152
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG +D VV +DL + + H G + S+D+ + +L A+GS D T+
Sbjct: 153 --DGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEG-HIRSIDFHPLEFLL-ATGSADRTV 208
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+ WD + + + + +P A + V + FHP G +L K Y+++
Sbjct: 209 KFWD--LETFELIGSARPEA--TGVRSITFHPDGRTLFCGLDDSLKVYSWE 255
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A + V C+ L+ +G D K + + K ++ GH V + F +
Sbjct: 13 AHTTNVNCLNIGKKACRLLISGGDDHKVNLWAIGKPTS-LMSLCGHTSPVESVTFDSAEV 71
Query: 247 LVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG + G +KLW++ +++++RT GH +N V + G GS + V+D+
Sbjct: 72 LVAAGASTGVIKLWDLEEAKMVRTLTGHRSNCTAVEFHPF--GEFFASGSLDTNLKVWDI 129
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H ++ G RG +S++ R D +V+GG D ++ V+
Sbjct: 130 R--KKGCIHTYK-----GHTRG-ISTI---RFTPDGRWVVSGGFDNVVKVW 169
>gi|213402073|ref|XP_002171809.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Schizosaccharomyces
japonicus yFS275]
gi|211999856|gb|EEB05516.1| U4/U6 small nuclear ribonucleoprotein Prp4 [Schizosaccharomyces
japonicus yFS275]
Length = 475
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 53/268 (19%)
Query: 47 VIEFDPSDSVFATGGIARKIRIYNIKSVL--------------VD-HPVVAVVDHS--KV 89
V+ +FA+G + +++I++ S+ VD HP V+ D + +V
Sbjct: 179 VVRLTGDAKMFASGNWSGQVKIWDTTSMSEQRLYRGHTDRVSGVDWHPAVSSWDSNSERV 238
Query: 90 C------DYYIC-------TP--------AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDL 128
C D +C TP A++ + + PG G +L S YD +D+
Sbjct: 239 CLASGAADNLVCLWSGASATPLRVLRGHLARVGRVAFHPG--GTLLASASYDTTWRMWDV 296
Query: 129 EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
E+ + ++ H V SV + +GD L ASG D ++WD R G+ V + AS
Sbjct: 297 EQGTELLMQEGHA-EGVASVAW-QGDGSLLASGGLDAIGRVWDVRT--GQSVMVLDAHAS 352
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-----D 243
A+ C+++ P G LV G D A +DVRK+ ++ H+ V+ +RF+ +
Sbjct: 353 --AIVCMDWAPNGYQLVT-GSVDDTARVWDVRKVTQSCMI-PAHKSLVSDVRFVRGAEYE 408
Query: 244 VDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
LVT+G DG +++W+ D ++ ++
Sbjct: 409 AACLVTSGYDGHVRVWDTLDWSLVHDFE 436
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 75/190 (39%), Gaps = 30/190 (15%)
Query: 142 GRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASR------SAVCCV 195
G R SV GD + ASG+ G +++WD T S R V V
Sbjct: 173 GERPTSVVRLTGDAKMFASGNWSGQVKIWD----------TTSMSEQRLYRGHTDRVSGV 222
Query: 196 EFHPFGSSL--------VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTL 247
++HP SS +A+G AD + P+ V GH V + F TL
Sbjct: 223 DWHPAVSSWDSNSERVCLASGAADNLVCLWSGASAT-PLRVLRGHLARVGRVAFHPGGTL 281
Query: 248 V-TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETNQVFVYDV 305
+ +A D ++W+V + +GH V W+ G LL G V+DV
Sbjct: 282 LASASYDTTWRMWDVEQGTELLMQEGHAEG---VASVAWQGDGSLLASGGLDAIGRVWDV 338
Query: 306 RWGEPVWVHD 315
R G+ V V D
Sbjct: 339 RTGQSVMVLD 348
>gi|302696103|ref|XP_003037730.1| hypothetical protein SCHCODRAFT_71535 [Schizophyllum commune H4-8]
gi|300111427|gb|EFJ02828.1| hypothetical protein SCHCODRAFT_71535 [Schizophyllum commune H4-8]
Length = 849
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 24/243 (9%)
Query: 40 AVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK 99
A SD + ++F P++ TG + IYN H A+V +V + +
Sbjct: 11 ARSDRVKAVDFHPTEPWLLTGLYNGTVNIYN-------HETGAIVKTFEVAEVPVRCVKF 63
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++ W V GS D+ V Y+ +KV FE R + + VL
Sbjct: 64 IARKNW------FVAGSDDFQLRVFNYNTHEKVTAFEAHPDYIRCL--TVHPTASIVL-- 113
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+GSDD T++ WD G K V + + + F+P S+ A+ C D+ + +
Sbjct: 114 TGSDDMTIKAWDWE-KGWKNVQVYE--GHTHYIMNIAFNPKDSNTFASACLDRTVKMWSI 170
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D H K V Y+ F D LVT G D +K+W+ ++T +GH NN
Sbjct: 171 -GATHANFTMDAHEKGVNYVDFYPGADKPYLVTCGDDKTVKVWDYLSKSCVQTMEGHTNN 229
Query: 277 RNF 279
+F
Sbjct: 230 VSF 232
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 81/216 (37%), Gaps = 42/216 (19%)
Query: 76 VDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK--VP 133
V+ + A D K D++ P L+ L Y+G V Y+ E V
Sbjct: 5 VNRKLFARSDRVKAVDFHPTEPWLLTGL---------------YNGTVNIYNHETGAIVK 49
Query: 134 IFERDE-------HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPS 186
FE E R+ W V +GSDD +++++ P
Sbjct: 50 TFEVAEVPVRCVKFIARKNWFV-----------AGSDDFQLRVFNYNTHEKVTAFEAHPD 98
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF--LDV 244
R C+ HP +S+V G D A+D K V V++GH + I F D
Sbjct: 99 YIR----CLTVHP-TASIVLTGSDDMTIKAWDWEKGWKNVQVYEGHTHYIMNIAFNPKDS 153
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+T +A D +K+W++ + T H N+V
Sbjct: 154 NTFASACLDRTVKMWSIGATHANFTMDAHEKGVNYV 189
>gi|209524478|ref|ZP_03273026.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
maxima CS-328]
gi|376006811|ref|ZP_09784026.1| Ser/Thr protein kinase [Arthrospira sp. PCC 8005]
gi|423064450|ref|ZP_17053240.1| serine/threonine protein kinase with WD40 repeat protein
[Arthrospira platensis C1]
gi|209494936|gb|EDZ95243.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
maxima CS-328]
gi|375324875|emb|CCE19779.1| Ser/Thr protein kinase [Arthrospira sp. PCC 8005]
gi|406713693|gb|EKD08861.1| serine/threonine protein kinase with WD40 repeat protein
[Arthrospira platensis C1]
Length = 589
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 30/274 (10%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P ++ A G R IR++ ++ +++++ S+ +P
Sbjct: 303 SVSCVAFSPDGNILAGGSFDRTIRLWRPQT---GEFMISLLGSSQPILAIAFSP------ 353
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRV-WSVDYS-KGDPVLGASG 161
G++L G DG + ++LE + H RV S+ +S KGD + ASG
Sbjct: 354 ------DGKLLAGGSGDGQIHLWNLENSEEVIAIAAHETDRVSMSITFSPKGDII--ASG 405
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDDGT+++W + + T+Q S + + L+AA +D + ++V
Sbjct: 406 SDDGTVKIW--KLSTCQLCHTLQHSRGINGIAI----SANGELLAAASSDNSIHLWEVNS 459
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH---VNNR 277
+ + GH + + I F + L +A +D +KLW++ ++++T GH V
Sbjct: 460 -TEHLGQLLGHERDINAIAFSPNSQILASASSDNTIKLWDMETQQLLKTLTGHEDWVRTV 518
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F+ LL GS + ++D+ G+ +
Sbjct: 519 AFIRSPDQDRKSLLVSGSADRTIKIWDLDQGKAI 552
>gi|394987159|gb|AFN42837.1| katanin-like protein [Marsilea vestita]
Length = 774
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 23/256 (8%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ + ++ LK TS RVL +G D V + + + PI H V SV +
Sbjct: 10 FVAHASNVNCLKIGKKTS-RVLVTGGEDAKVNMWAIGRPNPIMSLSGHSSA-VESVTFDA 67
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ L A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G D
Sbjct: 68 AE-ALVAAGAASGTIKLWD--LEEAKVVRTL--TGHRSNCIAVDFHPFGE-FFASGSLDT 121
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D+R+ + + GH + V ++F D +V+ G D +KLW++ +++ +K
Sbjct: 122 NLKIWDIRRK-GCIHTYKGHTRGVNVLKFSPDGRWVVSGGEDNIVKLWDLTAGKLMHDFK 180
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
H N L H LLG GS V +D+ FE + +AG E V S
Sbjct: 181 CHEGQINC--LDFHPHEFLLGTGSADRTVKFWDLE--------TFELIGSAGPEVSGVRS 230
Query: 332 VCWRRVGEDECTLVAG 347
+ + G+ TL+ G
Sbjct: 231 MIFNPDGQ---TLMVG 243
>gi|436670169|ref|YP_007317908.1| WD40 repeat-containing protein [Cylindrospermum stagnale PCC 7417]
gi|428262441|gb|AFZ28390.1| WD40 repeat-containing protein [Cylindrospermum stagnale PCC 7417]
Length = 1197
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 142 GRRVW--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
G + W S+ +S +L ASGS+D T+++WD + G+C+ T+Q S V + F P
Sbjct: 593 GHKAWVQSLAFSPDGEIL-ASGSNDQTVRLWD--ANTGQCLKTLQ--GHTSWVQSLAFSP 647
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKL 258
G ++A+G D+ +D + + GH V ++ F D TLVTA D +++
Sbjct: 648 DGE-ILASGSNDQTVRLWDANTG-QCLKILPGHTNRVIFVTFTPDEQTLVTASEDQTVRV 705
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP-------- 310
W+V+ R +R H+N V L+ G L S+ V +D+ GE
Sbjct: 706 WDVDTGRCLRIITTHINWVLSVALN--SDGRTLVTASDGKNVKFWDLASGECIKILPGYS 763
Query: 311 --VWVHDFEP---VTAAGSE 325
VW F P + A GSE
Sbjct: 764 SYVWAVAFSPDGKILATGSE 783
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 31/261 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + F P + A+G + ++I++ + H +V D + + C
Sbjct: 957 SSWVHAVSFSPDGQLLASGSRDKTVKIWDWYTGECLHTLVGHGDRVQTIAFSYC------ 1010
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
GR+L SG D + +D+ ++ + H V SV +S +L AS
Sbjct: 1011 ---------GRMLVSGSDDNAIKLWDISTEICLQTLSGHSDW-VLSVAFSPCADIL-ASA 1059
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ G+C+ T Q R V + F P G +L A+G D+ +D+
Sbjct: 1060 SGDRTIKLWNVHT--GQCLQTFQGHIYR--VRTIAFSPDGQTL-ASGSDDQTVKLWDIST 1114
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDS------RVIRTYKGHV 274
+ + F GHRK V I F + LV++ D +KLW++ R+ R Y+G +
Sbjct: 1115 N-NCLKTFQGHRKAVRSIAFSPNGLMLVSSSEDETIKLWDIETGECLKTLRMDRPYEG-M 1172
Query: 275 NNRNFVGLSVWRHGGLLGCGS 295
N +N +GL+ L G+
Sbjct: 1173 NIKNVIGLTTSEKNTLKALGA 1193
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 42/240 (17%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQ-----PSASRSA--VCCVEF 197
VW+V +S +L A+GS+D T+++WD G+C+ T+ P+ R+A V V F
Sbjct: 766 VWAVAFSPDGKIL-ATGSEDKTVKLWD--VVTGECLQTLHEHSDLPNGDRNASRVWLVAF 822
Query: 198 HPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCL 256
+P G SL++ G ++ +D+ + +G+ + + F D L ++ D +
Sbjct: 823 NPDGQSLLSLG-ENQTMKLWDLHTG-QCLRTVEGYSNWILSVAFSPDGQILASSSEDQQV 880
Query: 257 KLWNVNDSRVIRTYKGHVN--------NRNFVGLSVWR-------HGGLLGCGSETNQVF 301
+LW+VN + ++T +GH N +N G +V + +L GS+ +
Sbjct: 881 RLWDVNTGQCLQTLQGHTNLISSVSFAPQNIDGYTVDKGITSINHKSQILASGSDDTALK 940
Query: 302 VYDVR--------WGEPVWVH--DFEP---VTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
++ WG WVH F P + A+GS V W GE TLV G
Sbjct: 941 IWHTSTGECLQTLWGHSSWVHAVSFSPDGQLLASGSRDKTVKIWDW-YTGECLHTLVGHG 999
Score = 57.8 bits (138), Expect = 8e-06, Method: Composition-based stats.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L SG D V +D + HG R V ++ +S +L SGSDD +++W
Sbjct: 969 GQLLASGSRDKTVKIWDWYTGECLHTLVGHGDR-VQTIAFSYCGRML-VSGSDDNAIKLW 1026
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + C+ T+ S V V F P + ++A+ D+ ++V + F
Sbjct: 1027 DISTE--ICLQTL--SGHSDWVLSVAFSPC-ADILASASGDRTIKLWNVHTG-QCLQTFQ 1080
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V I F D TL + D +KLW+++ + ++T++GH + S +G
Sbjct: 1081 GHIYRVRTIAFSPDGQTLASGSDDQTVKLWDISTNNCLKTFQGHRKAVRSIAFS--PNGL 1138
Query: 290 LLGCGSETNQVFVYDVRWGE 309
+L SE + ++D+ GE
Sbjct: 1139 MLVSSSEDETIKLWDIETGE 1158
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V +V +S D L ASGS D T+++WD G+C+ T+ R V + F G L
Sbjct: 960 VHAVSFSP-DGQLLASGSRDKTVKIWDWYT--GECLHTLVGHGDR--VQTIAFSYCGRML 1014
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLD-VDTLVTAGTDGCLKLWNVND 263
V+ G D +D+ + + GH V + F D L +A D +KLWNV+
Sbjct: 1015 VS-GSDDNAIKLWDISTEI-CLQTLSGHSDWVLSVAFSPCADILASASGDRTIKLWNVHT 1072
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+ ++T++GH+ + S G L GS+ V ++D+
Sbjct: 1073 GQCLQTFQGHIYRVRTIAFS--PDGQTLASGSDDQTVKLWDI 1112
>gi|413919973|gb|AFW59905.1| hypothetical protein ZEAMMB73_759012 [Zea mays]
Length = 700
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 23/261 (8%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ + ++ LK TS RVL +G D V + + K I H V SV +
Sbjct: 14 FVAHASNVNCLKIGRKTS-RVLVTGGEDHKVNLWAIGKPNSILSLSGHTSA-VESVGFDS 71
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ V A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G D
Sbjct: 72 TE-VFVAAGAASGTIKLWD--LEEAKIVRTL--TGHRSNCMSVDFHPFGE-FFASGSLDT 125
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D+R+ + + + GH + V IRF D +V+ G D +KLW++ +++ +K
Sbjct: 126 NLKIWDIRRK-NCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNIVKLWDLTAGKLLHEFK 184
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
H + H LL GS V +D + FE + + G E V S
Sbjct: 185 CHEGQIQCIDFHP--HEFLLATGSADKTVKFWD--------LETFELIGSTGPETTGVRS 234
Query: 332 VCWRRVGEDECTLVAGGSDGL 352
+ + G TL+ G + L
Sbjct: 235 MTFNPDGR---TLLCGLHESL 252
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V C++ S ++ G D K + + K + +L GH V + F +
Sbjct: 16 AHASNVNCLKIGRKTSRVLVTGGEDHKVNLWAIGKP-NSILSLSGHTSAVESVGFDSTEV 74
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH--GGLLGCGSETNQVFVY 303
V AG G +KLW++ +++++RT GH +N +SV H G GS + ++
Sbjct: 75 FVAAGAASGTIKLWDLEEAKIVRTLTGHRSN----CMSVDFHPFGEFFASGSLDTNLKIW 130
Query: 304 DVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHV 355
D+R +H + +G V R D +V+GG D ++ +
Sbjct: 131 DIRRKN--CIHTY---------KGHTRGVNAIRFTPDGRWVVSGGEDNIVKL 171
>gi|427727968|ref|YP_007074205.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
gi|427363887|gb|AFY46608.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
Length = 1211
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 40/273 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P+ ++ ATGG R +R++ + + D + + + S+ + P
Sbjct: 847 VAFSPNGTILATGGEDRSVRLWEVST-------------GSCIDIWQGYGSWIQSVAFSP 893
Query: 108 GTSGRVLGSGDYDGVVMEYDLEK----KVP----IFERDEHGGRRVW--SVDYSKGDPVL 157
G+ L SG D V ++LEK K P + E G R W SV +S L
Sbjct: 894 --DGKTLASGSEDKTVRLWNLEKADSVKTPPDSMVLE-----GHRGWVCSVAFSPDGKHL 946
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+++WD + G+C+ T+Q + V F P G +L A+ D +
Sbjct: 947 -ASGSSDYTIKLWD--VNTGQCLKTLQ--GHSRWIGSVAFSPDGLTL-ASCSGDYTIKLW 1000
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D+ + + GH + ++F D TL +A D +KLW+V + I T GH +
Sbjct: 1001 DIITG-NCLKTLKGHEGWLWSVQFSPDGATLASASEDKTIKLWDVATGKCINTLVGHTSW 1059
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
G+S G LL GS + ++DV GE
Sbjct: 1060 VQ--GISFSPDGKLLASGSCDCTIRLWDVVTGE 1090
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 32/237 (13%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ I F P + A+G R ++I+ D K +L S+
Sbjct: 760 VRAIAFSPDGKLLASGSGDRTLKIWE-------------TDTGKCLRTLTGHTQRLRSVA 806
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW-SVDYSKGDPVLGASGSD 163
+ P G+++ SG D V + + + + HG + SV +S +L A+G +
Sbjct: 807 FSP--DGKLVASGSGDHTVRLWSVADGQSL--KTLHGHNSLLTSVAFSPNGTIL-ATGGE 861
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D ++++W+ G C+ Q S + V F P G +L A+G DK +++ K
Sbjct: 862 DRSVRLWE--VSTGSCIDIWQGYGS--WIQSVAFSPDGKTL-ASGSEDKTVRLWNLEK-A 915
Query: 224 DPV------LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
D V +V +GHR V + F D L + +D +KLW+VN + ++T +GH
Sbjct: 916 DSVKTPPDSMVLEGHRGWVCSVAFSPDGKHLASGSSDYTIKLWDVNTGQCLKTLQGH 972
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+RV SV +S D L ASG D T+++WD + G+C+ + S V V F P G
Sbjct: 674 QRVRSVAFSP-DGKLVASGGSDATIRVWD--ANTGECLQVLL--GHESYVWSVAFSPDGR 728
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNV 261
++A+G DK +DV + + + HR V I F L+ +G+ D LK+W
Sbjct: 729 -MIASGSEDKSIKLWDVNRGECRQTLLEHHR-WVRAIAFSPDGKLLASGSGDRTLKIWET 786
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ + +RT GH V S G L+ GS + V ++ V G+ +
Sbjct: 787 DTGKCLRTLTGHTQRLRSVAFS--PDGKLVASGSGDHTVRLWSVADGQSL 834
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
+WSV +S L AS S+D T+++WD GKC++T+ S V + F P G L
Sbjct: 1018 LWSVQFSPDGATL-ASASEDKTIKLWD--VATGKCINTL--VGHTSWVQGISFSPDGK-L 1071
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
+A+G D +DV + + GH V + F ++ +G+ D +K WN+N
Sbjct: 1072 LASGSCDCTIRLWDVVTG-ECLETLRGHTSWVQSVAFSPHGEILASGSCDQTVKFWNINT 1130
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ +T H + V S +G ++ G + + ++D+ G+
Sbjct: 1131 GKCQQTIPAHQSWVWSVAFS--PNGEIVASGGQDETIQLWDIHTGK 1174
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD--GHRKTVTYIRF-LDVDT 246
+++ + F P G L+A G + + + +R++ + L+ GH V I F D
Sbjct: 590 TSILSLAFSPNGK-LLATGDVNGEIH---LREIANGQLILSCKGHAGWVHSITFSADGKM 645
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
L +A +D +KLW+V D ++T GH V S G L+ G + V+D
Sbjct: 646 LCSASSDHTVKLWDVFDGSCLKTLVGHHQRVRSVAFS--PDGKLVASGGSDATIRVWDAN 703
Query: 307 WGE----------PVWVHDFEP---VTAAGSE 325
GE VW F P + A+GSE
Sbjct: 704 TGECLQVLLGHESYVWSVAFSPDGRMIASGSE 735
>gi|15224356|ref|NP_181905.1| Prp8 binding protein [Arabidopsis thaliana]
gi|2281093|gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana]
gi|20260566|gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana]
gi|31711822|gb|AAP68267.1| At2g43770 [Arabidopsis thaliana]
gi|330255228|gb|AEC10322.1| Prp8 binding protein [Arabidopsis thaliana]
Length = 343
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 32/290 (11%)
Query: 26 NLRTTVSSSSSPNAAVS---DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
N + SS +P +S ++ ++F+P+ ++ A+G R+I ++ +
Sbjct: 34 NGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV----------- 82
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
H ++ + K + L + G + S D V +D+E I + EH
Sbjct: 83 ---HGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSS 139
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+G P++ SGSDDGT ++WD R G +Q + + V F
Sbjct: 140 FVNSCCPTRRGPPLI-ISGSDDGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSDAAD 193
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
+ G D +D+RK + + +GH+ T+T + D L+T G D L +W++
Sbjct: 194 KIFTGG-VDNDVKVWDLRKG-EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Query: 262 N----DSRVIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+R ++ ++GH +N +N + S G + GS V ++D
Sbjct: 252 RPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
>gi|17233145|ref|NP_490235.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
gi|17135667|dbj|BAB78213.1| WD-repeat protein [Nostoc sp. PCC 7120]
Length = 1189
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L + D GV+ +D+ +F EH +W V +S PVL + G D T+++W+
Sbjct: 577 LATSDTSGVINIWDVNNGKQLFNCQEHNSW-IWDVAFSSVAPVLASCGQDH-TIKLWNTT 634
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
G+C +T+ S V V F P G L+A+ D +D+ + + F GH
Sbjct: 635 T--GECFNTLH--GHTSIVTSVAFSPEGK-LLASSSYDHSVKVWDL-DTGECLQTFLGHD 688
Query: 234 KTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG-LL 291
V + F V L TAG D +KLW + ++T +GH +++V + GG +L
Sbjct: 689 ACVWSVVFHPVGQILATAGEDNTIKLWELQSGCCLKTLQGH---QHWVKTIAFNSGGRIL 745
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GS V ++D+ G+ V
Sbjct: 746 ASGSFDQNVKLWDIHTGKCV 765
Score = 58.2 bits (139), Expect = 7e-06, Method: Composition-based stats.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 22/244 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L + D + ++L+ + H V ++ ++ G +L ASGS D +++W
Sbjct: 700 GQILATAGEDNTIKLWELQSGCCLKTLQGHQ-HWVKTIAFNSGGRIL-ASGSFDQNVKLW 757
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D GKCV T+Q V V F+P +L+ +G D+ +D RK +
Sbjct: 758 DIHT--GKCVMTLQ--GHTGVVTSVAFNP-KDNLLLSGSYDQSVKVWD-RKTGRCLDTLK 811
Query: 231 GHRKTVTYIRFLDVDTL-VTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
H + + F L V+ G D K+W + + I+T++GH +N + W H
Sbjct: 812 KHTNRIWSVAFHPQGHLFVSGGDDHAAKIWELGTGQCIKTFQGH-SNATYTIAHNWEH-S 869
Query: 290 LLGCGSETNQVFVYDVRWGEP----VWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
LL G E + ++D+ P V H F + S R F SV + G+ L+
Sbjct: 870 LLASGHEDQTIKLWDLNLHSPHKSNVNTHPFR-ILQGHSNRVF--SVVFSSTGQ----LL 922
Query: 346 AGGS 349
A GS
Sbjct: 923 ASGS 926
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ GR+L SG +D V +D+ + H G V SV ++ D +L SGS D +++
Sbjct: 740 SGGRILASGSFDQNVKLWDIHTGKCVMTLQGHTG-VVTSVAFNPKDNLL-LSGSYDQSVK 797
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + G+C+ T++ +R + V FHP G V+ G D A +++ +
Sbjct: 798 VWDRKT--GRCLDTLKKHTNR--IWSVAFHPQGHLFVSGG-DDHAAKIWEL-GTGQCIKT 851
Query: 229 FDGHRK-TVTYIRFLDVDTLVTAGTDGCLKLWNVN---------DSRVIRTYKGHVNNRN 278
F GH T T + L + D +KLW++N ++ R +GH N
Sbjct: 852 FQGHSNATYTIAHNWEHSLLASGHEDQTIKLWDLNLHSPHKSNVNTHPFRILQGHSNRVF 911
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G LL GS + ++ G+
Sbjct: 912 SVVFS--STGQLLASGSADRTIKLWSPHTGQ 940
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 11/202 (5%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
++G++L SG D + + + HG VW++ +S D +L ASGS D T++
Sbjct: 917 STGQLLASGSADRTIKLWSPHTGQCLHTLHGHGSW-VWAIAFSLDDKLL-ASGSYDHTVK 974
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK-MVDPVL 227
+WD G+C+ T+Q +V V F G +L ++G +K +DV
Sbjct: 975 IWD--VSSGQCLQTLQ--GHPGSVLAVAFSCDGKTLFSSG-YEKLVKQWDVETGYCLQTW 1029
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
D +R + D L T G D ++LW++ +RT+ GH + + + +
Sbjct: 1030 EADSNRVWAVAVS-RDNQYLATGGDDSVVRLWDIGKGVCVRTFSGHTS--QVICILFTKD 1086
Query: 288 GGLLGCGSETNQVFVYDVRWGE 309
G + S + +++V GE
Sbjct: 1087 GRRMISSSSDRTIKIWNVSTGE 1108
Score = 47.0 bits (110), Expect = 0.016, Method: Composition-based stats.
Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 33/259 (12%)
Query: 23 WDFNLRTTVSSSSSPN-----AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD 77
WD NL + S+ + + S+ + + F + + A+G R I++++
Sbjct: 883 WDLNLHSPHKSNVNTHPFRILQGHSNRVFSVVFSSTGQLLASGSADRTIKLWS------- 935
Query: 78 HPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTS--GRVLGSGDYDGVVMEYDLEKKVPIF 135
H+ C + T S W S ++L SG YD V +D+ +
Sbjct: 936 -------PHTGQC---LHTLHGHGSWVWAIAFSLDDKLLASGSYDHTVKIWDVSSGQCLQ 985
Query: 136 ERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCV 195
H G V +V +S L +SG + ++ WD + G C+ T + ++R V
Sbjct: 986 TLQGHPGS-VLAVAFSCDGKTLFSSGYEK-LVKQWD--VETGYCLQTWEADSNRVWAVAV 1041
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDG 254
+ +A G D +D+ K V V F GH V I F D ++++ +D
Sbjct: 1042 SRD---NQYLATGGDDSVVRLWDIGKGV-CVRTFSGHTSQVICILFTKDGRRMISSSSDR 1097
Query: 255 CLKLWNVNDSRVIRTYKGH 273
+K+WNV+ + T + H
Sbjct: 1098 TIKIWNVSTGECLATLQAH 1116
>gi|238483775|ref|XP_002373126.1| wd40 protein, putative [Aspergillus flavus NRRL3357]
gi|220701176|gb|EED57514.1| wd40 protein, putative [Aspergillus flavus NRRL3357]
Length = 632
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 23/199 (11%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+VL SG D + +D V SVD+S ++ ASGS T+++WD
Sbjct: 350 QVLASGSKDNTINPWDYSNSVV-------------SVDFSSNGQMI-ASGSKANTVKLWD 395
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
P G+ + ++ +V V F F S ++A+G D+ +D K + DG
Sbjct: 396 PNT--GQPLRVLE--GHSDSVASVVF-SFDSHMIASGSYDRTIKLWD-SKTGKQLRTLDG 449
Query: 232 HRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
H +V + F LV +G+D +KLW+ N + +RT +GH + V S G L
Sbjct: 450 HSDSVVSVAFSPDSQLVVSGSDDNTIKLWDSNTGQQLRTMRGHSDWVQSVAFS--PDGQL 507
Query: 291 LGCGSETNQVFVYDVRWGE 309
+ GS N + ++D G+
Sbjct: 508 VASGSYDNTIMLWDTNTGQ 526
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV +S D L ASGS D T+ +WD + G+ + T++ S V V F P G +
Sbjct: 496 VQSVAFSP-DGQLVASGSYDNTIMLWD--TNTGQHLRTLK--GHSSLVGAVAFSPDGH-M 549
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A+G DK ++ K + +GH V + FL D T+ + D +KLW+
Sbjct: 550 IASGSYDKTVKLWNT-KTGQQLRTLEGHSGIVRSVTFLPDSQTVASGSYDSTIKLWDTTT 608
Query: 264 SRVIRTYKGH 273
+RT +GH
Sbjct: 609 GLELRTIRGH 618
>gi|302787423|ref|XP_002975481.1| hypothetical protein SELMODRAFT_442850 [Selaginella moellendorffii]
gi|300156482|gb|EFJ23110.1| hypothetical protein SELMODRAFT_442850 [Selaginella moellendorffii]
Length = 773
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H V SV + + VL +G+ GT+++
Sbjct: 31 SSRVLVTGGEDHKVNMWAIGKPNAILSLSGHTSG-VESVAFDAAE-VLVVAGAASGTIKL 88
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + RS V+FHPFG A+G D +D+R+ + +
Sbjct: 89 WD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRRK-GCIHTY 142
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V ++F D +V+ G D +KLW++ ++I +K H L H
Sbjct: 143 KGHTRGVKCVKFSPDGRWIVSGGEDNVVKLWDLTAGKLIHDFKYH--EAQIQCLDFHPHE 200
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V YD + FE + ++G E
Sbjct: 201 FLLASGSADKTVKFYD--------LETFELIGSSGPE 229
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVT 249
S V C++ S ++ G D K + + K + +L GH V + F + LV
Sbjct: 20 SDVNCLKIGKKSSRVLVTGGEDHKVNMWAIGK-PNAILSLSGHTSGVESVAFDAAEVLVV 78
Query: 250 AGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
AG G +KLW++ +++++RT GH N + + G GS + ++D+R
Sbjct: 79 AGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDIR 134
>gi|427738845|ref|YP_007058389.1| WD40 repeat-containing protein [Rivularia sp. PCC 7116]
gi|427373886|gb|AFY57842.1| WD40 repeat-containing protein [Rivularia sp. PCC 7116]
Length = 1493
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 44/268 (16%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS---VL---------------VDHPVVAVVDHSKV 89
+ F P D + TGG +IR++ ++S +L D ++A HS
Sbjct: 883 LAFSPDDKLLVTGGADGEIRMWELESGKQILNFRGHNDWVSSVAFNFDGKIIASCSHSSA 942
Query: 90 CDYYICTPAKLSSLKWKPGTSGRV-----------LGSGDYDGVVMEYDLEKKVPIFERD 138
+ + LK G + +V L S + ++ +D+ + I
Sbjct: 943 IKLWDSKTGE--CLKILRGHTNKVRQIAFDSNSTILASCSDNRIIKLWDVSTEKCINTLR 1000
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
H GR +W+V + + ++ ASGS D ++++WD G C+ T+ R V V F
Sbjct: 1001 GHTGR-IWTVAIAPNNKIV-ASGSYDSSVKIWDILT--GDCLQTLHEHDHR--VISVVF- 1053
Query: 199 PFGSSLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGC 255
S ++A+G DK +D+ K + ++ GH KT+ + F D TL +A +D
Sbjct: 1054 SHDSKILASGSKDKIIKIWDINTGKCIKNLI---GHTKTIRSLVFSKDNQTLFSASSDST 1110
Query: 256 LKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+K+W++ND + ++T GH N + L+
Sbjct: 1111 IKVWSINDGKCLKTITGHKNRIRTIALN 1138
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS- 203
+WSV + D ASGS +G +++WD GKC+ T+Q + C +E F
Sbjct: 1342 IWSVAVAT-DGTTIASGSRNGIIKIWD--IHSGKCLKTLQDNH-----CGIESVQFSHDG 1393
Query: 204 -LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNV 261
L+AA D+ ++ + + GH+ VT + F D + +G+ DG +K+WN+
Sbjct: 1394 LLLAASSIDQTINIWNA-ATGEFIKTLKGHKNRVTSVAFTPDDKFLVSGSYDGTIKIWNI 1452
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
I+T ++N+ + +++ GL
Sbjct: 1453 QTGECIKT----LSNKPYANMNITNATGL 1477
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D + ASGS D T+++WD + G C+ Q A + V V F G +L A+ D+
Sbjct: 1224 DSRIIASGSGDRTVKIWD--FNTGNCLKAFQ--AHINPVSDVTFSNDGLTL-ASTSHDQT 1278
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+DV+ + F GH V + F D T+++ D +KLW++N + I+T +G
Sbjct: 1279 IKLWDVKNG-KCLHTFQGHTDWVNSVVFSRDGKTVISNSNDCTIKLWHINTGKCIKTLQG 1337
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
H + ++V G + GS + ++D+ G+
Sbjct: 1338 H--DAAIWSVAVATDGTTIASGSRNGIIKIWDIHSGK 1372
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 24/220 (10%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
R+ ++ + D VL S SDD T+++W + G+C+ +Q + V V P G +
Sbjct: 1131 RIRTIALNSKDTVL-VSCSDDQTIKLW--HTNTGECLQALQ--GCKHWVASVTVSPDGKT 1185
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVN 262
+++ K + Y K GH K ++ + ++ +G+ D +K+W+ N
Sbjct: 1186 IISGSNNQKIKFWY--IKTGRCFRTIRGHDKWISSVTISPDSRIIASGSGDRTVKIWDFN 1243
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA 322
++ ++ H+N + V S G L S + ++DV+ G+ +H F+ T
Sbjct: 1244 TGNCLKAFQAHINPVSDVTFS--NDGLTLASTSHDQTIKLWDVKNGK--CLHTFQGHT-- 1297
Query: 323 GSERGFVSSVCWRRVGEDECTLVAGGSD---GLLHVFVGK 359
+V+SV + R G+ T+++ +D L H+ GK
Sbjct: 1298 ----DWVNSVVFSRDGK---TVISNSNDCTIKLWHINTGK 1330
Score = 39.3 bits (90), Expect = 2.8, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 81/198 (40%), Gaps = 11/198 (5%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
++L SG D ++ +D+ I H + + S+ +SK + L S S D T+++W
Sbjct: 1058 KILASGSKDKIIKIWDINTGKCIKNLIGHT-KTIRSLVFSKDNQTL-FSASSDSTIKVWS 1115
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
+ GKC+ T+ +R + V C+D + + + G
Sbjct: 1116 --INDGKCLKTITGHKNRIRTIALN----SKDTVLVSCSDDQTIKLWHTNTGECLQALQG 1169
Query: 232 HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
+ V + D T+++ + +K W + R RT +GH ++ +++ +
Sbjct: 1170 CKHWVASVTVSPDGKTIISGSNNQKIKFWYIKTGRCFRTIRGH--DKWISSVTISPDSRI 1227
Query: 291 LGCGSETNQVFVYDVRWG 308
+ GS V ++D G
Sbjct: 1228 IASGSGDRTVKIWDFNTG 1245
Score = 38.1 bits (87), Expect = 7.1, Method: Composition-based stats.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 111 GRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVW--SVDYSK-GDPVLGASGSDDG 165
G L S +D + +D++ K + F+ G W SV +S+ G V+ S S+D
Sbjct: 1267 GLTLASTSHDQTIKLWDVKNGKCLHTFQ-----GHTDWVNSVVFSRDGKTVI--SNSNDC 1319
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++W + GKC+ T+Q +A+ V G++ +A+G + +D+
Sbjct: 1320 TIKLW--HINTGKCIKTLQ--GHDAAIWSVAVATDGTT-IASGSRNGIIKIWDIHSGKCL 1374
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ D H + ++F L+ A + D + +WN I+T KGH N V +
Sbjct: 1375 KTLQDNH-CGIESVQFSHDGLLLAASSIDQTINIWNAATGEFIKTLKGHKNRVTSVAFT- 1432
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGE 309
L GS + +++++ GE
Sbjct: 1433 -PDDKFLVSGSYDGTIKIWNIQTGE 1456
>gi|393231066|gb|EJD38663.1| HET-E [Auricularia delicata TFB-10046 SS5]
Length = 506
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 117/260 (45%), Gaps = 24/260 (9%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVL 157
L+S+ + P + + D D + +D E P+ + G W SV YS D
Sbjct: 264 LNSVAFSPDERSLICSTSD-DRAIRRWDAESGAPVGK--PMTGHSGWMNSVAYSP-DGSR 319
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
SG+DDGT+++WD G+ + V +VCCV F P G+ +A+G D +
Sbjct: 320 IVSGTDDGTVRLWDAST--GEALG-VPLKGHTLSVCCVAFSPDGA-CIASGSLDNTIRLW 375
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D + GH V + F D LV+ D +++WNV ++ RT +GH +
Sbjct: 376 DSATRAQ-LATLKGHTGMVFSLCFSPDRIHLVSGSYDNTVRIWNVAARQLERTLRGHSED 434
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRR 336
N V +S+ G + GS+ + V D + GE V P+T +V SV +
Sbjct: 435 VNSVAVSL--SGRYIASGSDDKTIRVLDAQTGEAV----GAPLTG---HTDWVRSVAFSP 485
Query: 337 VGEDECTLVAGGSDGLLHVF 356
G ++V+G DG L V+
Sbjct: 486 DGR---SIVSGSDDGTLRVW 502
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 106/266 (39%), Gaps = 25/266 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYN-IKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWK 106
+ F + + +G + IRI++ I +V P++ HS +P
Sbjct: 11 VAFLAAGNRVVSGSRDKSIRIWDTITGAVVLGPLLG---HSSAVRCVAVSP--------- 58
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
+G L S D + +D E PI E V V YS D SG+ D T
Sbjct: 59 ---NGNQLCSASEDHTIRLWDAESGSPIGEPMIGHDGWVHCVAYSP-DGARIVSGAADRT 114
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++W+ G + ++ A V F P G+ +A+G D +D +
Sbjct: 115 VRLWNT-VTGRELGLPLEGHAWN--VTSTTFAPDGA-CIASGSVDCTIRLWDSTTGAH-L 169
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
GH V I F D LV+ D +++WNV R+ KGH + V +S
Sbjct: 170 ATLTGHENPVLSISFSPDQIHLVSGSEDETIRIWNVATGRLDHILKGHSSFVYSVSVSQ- 228
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPV 311
G + GS+ + ++D + GEPV
Sbjct: 229 -SGRYIASGSDDKTIRIWDAQTGEPV 253
>gi|332029609|gb|EGI69498.1| Katanin p80 WD40-containing subunit B1 [Acromyrmex echinatior]
Length = 879
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRVL +G D V + + K+ I H + V + + + ++ A GS G +++
Sbjct: 30 SGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTP-IECVRFGQTEDLVCA-GSQTGALKI 87
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K T+ + +S + C++FHP+G L+A+G D +D+R+ + +
Sbjct: 88 WD--LEHAKLARTL--TGHKSGIRCMDFHPYGE-LLASGSLDTAIKLWDIRRK-GCIFTY 141
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V ++F D + +AG +G +KLW++ R +R + H V H
Sbjct: 142 KGHNRIVNSLKFSPDGQWIASAGEEGMVKLWDLKAGRQLREFSEHRGPATTVEFHP--HE 199
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V +D+
Sbjct: 200 FLLASGSADRTVHFWDL 216
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 10/193 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G +L SG D + +D+ +K IF H R V S+ +S D AS ++G +++W
Sbjct: 115 GELLASGSLDTAIKLWDIRRKGCIFTYKGHN-RIVNSLKFSP-DGQWIASAGEEGMVKLW 172
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+ + S R VEFHP L+A+G AD+ + +D+
Sbjct: 173 D--LKAGRQLREF--SEHRGPATTVEFHPH-EFLLASGSADRTVHFWDLESFQLVSSTEQ 227
Query: 231 GHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
H + + F + AG+ LK++ R + T + + ++ L
Sbjct: 228 SHSSAIRCLYFSQGGECLFAGSHDVLKVYGWEPGRTLDTIPTNWGKVQDIAIA---QNQL 284
Query: 291 LGCGSETNQVFVY 303
+G T V +Y
Sbjct: 285 IGASLHTANVALY 297
>gi|302793911|ref|XP_002978720.1| hypothetical protein SELMODRAFT_443995 [Selaginella moellendorffii]
gi|300153529|gb|EFJ20167.1| hypothetical protein SELMODRAFT_443995 [Selaginella moellendorffii]
Length = 773
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H V SV + + VL +G+ GT+++
Sbjct: 31 SSRVLVTGGEDHKVNMWAIGKPNAILSLSGHTSG-VESVAFDAAE-VLVVAGAASGTIKL 88
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + RS V+FHPFG A+G D +D+R+ + +
Sbjct: 89 WD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRRK-GCIHTY 142
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V ++F D +V+ G D +KLW++ ++I +K H L H
Sbjct: 143 KGHTRGVKCVKFSPDGRWIVSGGEDNVVKLWDLTAGKLIHDFKYH--EAQIQCLDFHPHE 200
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V YD + FE + ++G E
Sbjct: 201 FLLASGSADKTVKFYD--------LETFELIGSSGPE 229
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVT 249
S V C++ S ++ G D K + + K + +L GH V + F + LV
Sbjct: 20 SDVNCLKIGKKSSRVLVTGGEDHKVNMWAIGK-PNAILSLSGHTSGVESVAFDAAEVLVV 78
Query: 250 AGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
AG G +KLW++ +++++RT GH N + + G GS + ++D+R
Sbjct: 79 AGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDIR 134
>gi|332664229|ref|YP_004447017.1| (myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
gi|332333043|gb|AEE50144.1| (Myosin heavy-chain) kinase., Histone acetyltransferase
[Haliscomenobacter hydrossis DSM 1100]
Length = 1129
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD++ + F P ATG + ++++++ + ++++ HS + +P
Sbjct: 150 SDAVRSVAFSPDGQRLATGSEDKTLKVWDLGT---GKALLSLEGHSAFVESVAFSP---- 202
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G L +G D ++ +DL + + H + SV +S L A+G
Sbjct: 203 --------DGLRLATGSEDKMLKVWDLSTGKALLSLEGHSDA-ILSVAFSPDGQRL-ATG 252
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T ++WD GK + T+Q +S + V F P G L A G D A + +
Sbjct: 253 SRDNTAKVWDSTT--GKALLTLQGHSSW--IYSVAFSPDGQRL-ATGSWDNTAKVWRL-N 306
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+L +GH V+ + F D LVT D K+W++N + +R +GH ++ V
Sbjct: 307 TGKALLSLEGHSAYVSSVSFSPDGQRLVTGSWDHTAKVWDLNTGKALRNLEGHSDDVWSV 366
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L GS ++D+ G+ +
Sbjct: 367 AFS--PDGQRLATGSRDKTAKIWDLSTGQAL 395
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 115/271 (42%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD++ + F P ATG ++++++ + ++++ HS +P
Sbjct: 696 SDAVLSVAFSPDGRRLATGSWDHTVKVWDLST---GQALLSLQGHSSWGYSLAFSP---- 748
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G+ L +G D + +DL + + H +WSV +S L A+G
Sbjct: 749 --------DGQRLATGSSDKMAKLWDLSMGQVLLSLEGHS-EAIWSVIFSPDGQRL-ATG 798
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T ++WD G+ + +++ + AV V F P G L A G D A +D+
Sbjct: 799 SRDNTAKIWD--LSTGQALLSLEGHSD--AVRSVAFSPHGQRL-ATGSWDHTAKVWDL-S 852
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+L GH V + F D L T +D K+W++N + + + +GH + V
Sbjct: 853 TGKALLSLKGHSDAVLSVAFSPDGQRLATGSSDHTAKVWDLNTGQALLSLEGHSDAVWSV 912
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L GS + V+D+ G+ +
Sbjct: 913 AFS--PDGQRLATGSSDHMAKVWDLSTGQAL 941
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD++ + F P ATG + + ++++ + ++ + HS A +S
Sbjct: 486 SDAVRSVAFSPDGQKLATGSEDKTVNVWHLST---GRALLNLQGHS----------AYVS 532
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L +G D +DL + + H VWSV +S L A+G
Sbjct: 533 SVSFSP--DGQRLATGSRDKTAKIWDLSTGKTLLSLEGHSD-AVWSVSFSPDGQRL-ATG 588
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D T ++WD GK + ++Q ++ V V F P G L A G D A +D+
Sbjct: 589 SEDNTAKVWD--LSAGKALLSLQGHSAD--VRSVAFSPDGRRL-ATGSWDYTAKIWDL-S 642
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+L GH V + F D L T D K+W++ + + + +GH + V
Sbjct: 643 TGQALLSLQGHSDAVWSVSFSPDGQRLATGSRDKTAKIWDLITGQALLSLEGHSDAVLSV 702
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L GS + V V+D+ G+ +
Sbjct: 703 AFS--PDGRRLATGSWDHTVKVWDLSTGQAL 731
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 36/276 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD++ + F P ATG +++++ + ++++ HS A +
Sbjct: 570 SDAVWSVSFSPDGQRLATGSEDNTAKVWDLSA---GKALLSLQGHS----------ADVR 616
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P GR L +G +D +DL + H VWSV +S L A+G
Sbjct: 617 SVAFSP--DGRRLATGSWDYTAKIWDLSTGQALLSLQGHSDA-VWSVSFSPDGQRL-ATG 672
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T ++WD G+ + +++ + AV V F P G L A G D +D+
Sbjct: 673 SRDKTAKIWDLIT--GQALLSLEGHSD--AVLSVAFSPDGRRL-ATGSWDHTVKVWDL-S 726
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+L GH + F D L T +D KLW+++ +V+ + +GH
Sbjct: 727 TGQALLSLQGHSSWGYSLAFSPDGQRLATGSSDKMAKLWDLSMGQVLLSLEGHSE----- 781
Query: 281 GLSVWR-----HGGLLGCGSETNQVFVYDVRWGEPV 311
++W G L GS N ++D+ G+ +
Sbjct: 782 --AIWSVIFSPDGQRLATGSRDNTAKIWDLSTGQAL 815
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 26/265 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P ATG + +++++ + ++++ HS+ I +P
Sbjct: 744 LAFSPDGQRLATGSSDKMAKLWDLS---MGQVLLSLEGHSEAIWSVIFSP---------- 790
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L +G D +DL + + H V SV +S L A+GS D T
Sbjct: 791 --DGQRLATGSRDNTAKIWDLSTGQALLSLEGHSDA-VRSVAFSPHGQRL-ATGSWDHTA 846
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD GK + +++ + AV V F P G L A G +D A +D+ +L
Sbjct: 847 KVWD--LSTGKALLSLKGHSD--AVLSVAFSPDGQRL-ATGSSDHTAKVWDL-NTGQALL 900
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+GH V + F D L T +D K+W+++ + + + +GH V S
Sbjct: 901 SLEGHSDAVWSVAFSPDGQRLATGSSDHMAKVWDLSTGQALLSLQGHSEAVLSVAFS--H 958
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPV 311
G L GSE ++D+ G+ +
Sbjct: 959 DGQRLATGSEDKTTKLWDLSMGKAL 983
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 26/265 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P ATG +++ + + ++++ HS A +SS+ + P
Sbjct: 282 VAFSPDGQRLATGSWDNTAKVWRLNT---GKALLSLEGHS----------AYVSSVSFSP 328
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L +G +D +DL + + H VWSV +S L A+GS D T
Sbjct: 329 --DGQRLVTGSWDHTAKVWDLNTGKALRNLEGHSDD-VWSVAFSPDGQRL-ATGSRDKTA 384
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD G+ + +++ + AV V F G L A G DK A +D+ +L
Sbjct: 385 KIWD--LSTGQALLSLEGHSD--AVWSVAFSLNGQRL-ATGSRDKTAKVWDL-STGQALL 438
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+GH V + F D L T D K+W+++ R + + +GH + V S
Sbjct: 439 SLEGHSAAVLSVAFSPDGQRLATGSRDKTAKVWDLSTGRALLSLEGHSDAVRSVAFS--P 496
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPV 311
G L GSE V V+ + G +
Sbjct: 497 DGQKLATGSEDKTVNVWHLSTGRAL 521
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 24/229 (10%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L +G D +DL + + H VWSV +S L A+GS D T ++W
Sbjct: 372 GQRLATGSRDKTAKIWDLSTGQALLSLEGHSDA-VWSVAFSLNGQRL-ATGSRDKTAKVW 429
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+ + +++ ++ AV V F P G L A G DK A +D+ +L +
Sbjct: 430 D--LSTGQALLSLEGHSA--AVLSVAFSPDGQRL-ATGSRDKTAKVWDL-STGRALLSLE 483
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D L T D + +W+++ R + +GH + V S G
Sbjct: 484 GHSDAVRSVAFSPDGQKLATGSEDKTVNVWHLSTGRALLNLQGHSAYVSSVSFS--PDGQ 541
Query: 290 LLGCGSETNQVFVYDVRWG----------EPVWVHDFEP---VTAAGSE 325
L GS ++D+ G + VW F P A GSE
Sbjct: 542 RLATGSRDKTAKIWDLSTGKTLLSLEGHSDAVWSVSFSPDGQRLATGSE 590
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 26/265 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S++I + F P ATG +I+++ + ++++ HS +P
Sbjct: 780 SEAIWSVIFSPDGQRLATGSRDNTAKIWDLST---GQALLSLEGHSDAVRSVAFSP---- 832
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G+ L +G +D +DL + H V SV +S L A+G
Sbjct: 833 --------HGQRLATGSWDHTAKVWDLSTGKALLSLKGHSDA-VLSVAFSPDGQRL-ATG 882
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T ++WD + G+ + +++ + AV V F P G L A G +D A +D+
Sbjct: 883 SSDHTAKVWD--LNTGQALLSLEGHSD--AVWSVAFSPDGQRL-ATGSSDHMAKVWDL-S 936
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+L GH + V + F D L T D KLW+++ + + + +GH V
Sbjct: 937 TGQALLSLQGHSEAVLSVAFSHDGQRLATGSEDKTTKLWDLSMGKALLSLQGHSEAVLSV 996
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV 305
S G L GS V+D+
Sbjct: 997 AFS--PDGQRLATGSRDKTTKVWDM 1019
>gi|428214264|ref|YP_007087408.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
gi|428002645|gb|AFY83488.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 684
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEK---KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G + SG DG + + + +VP+ H VW++ S L ASGS D T+
Sbjct: 404 GSTIASGSTDGTIQLWHVSTNNVRVPLRILSGHSDP-VWTLAVSPNGQFL-ASGSADKTI 461
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-----KAYAYDVRKM 222
++WD R G+ + T++ ++ V V F P SL A+G DK + +A + +
Sbjct: 462 KLWDLRT--GELLGTLK--GHKAGVFSVAFSPDSQSL-ASGSFDKSIKVWRLHANNYSGL 516
Query: 223 V-DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
V F GH + V + F D TL + TDG +KLWN ++IRT GH + V
Sbjct: 517 AGSEVRSFIGHSQEVQSVAFSSDGQTLASGSTDGTVKLWNWQSGKLIRTLLGHSDAVWSV 576
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G + GS + ++D G PV
Sbjct: 577 AFS--PDGNTIASGSWDKTIKLWDFSSGLPV 605
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+ V SV +S L ASGS DGT+++W+ GK + T+ AV V F P G+
Sbjct: 529 QEVQSVAFSSDGQTL-ASGSTDGTVKLWN--WQSGKLIRTLL--GHSDAVWSVAFSPDGN 583
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
+ +A+G DK +D + PV GH + V + F D TL + G +KLW +
Sbjct: 584 T-IASGSWDKTIKLWDFSSGL-PVRTLKGHSEQVHSVAFNPDGQTLASGDLGGTIKLWKM 641
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+ + T KGH ++VG++ + G L GS + + ++ V
Sbjct: 642 DTGSQVGTLKGHT---DWVGVAFSKSGKTLVSGSFDDTIKLWKV 682
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 24/241 (9%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPA 98
A S + + P S A+G I+++++ + V P+ + HS +P
Sbjct: 389 AIASGPVWSVAVSPDGSTIASGSTDGTIQLWHVSTNNVRVPLRILSGHSDPVWTLAVSP- 447
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+G+ L SG D + +DL + H V+SV +S L
Sbjct: 448 -----------NGQFLASGSADKTIKLWDLRTGELLGTLKGHKAG-VFSVAFSPDSQSL- 494
Query: 159 ASGSDDGTMQMWDPRCDG--GKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADK--K 213
ASGS D ++++W + G S V+ S V V F G +L A+G D K
Sbjct: 495 ASGSFDKSIKVWRLHANNYSGLAGSEVRSFIGHSQEVQSVAFSSDGQTL-ASGSTDGTVK 553
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+ + K++ +L GH V + F D +T+ + D +KLW+ + +RT KG
Sbjct: 554 LWNWQSGKLIRTLL---GHSDAVWSVAFSPDGNTIASGSWDKTIKLWDFSSGLPVRTLKG 610
Query: 273 H 273
H
Sbjct: 611 H 611
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 87/220 (39%), Gaps = 26/220 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIY----NIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
+ F P A+G + I+++ N S L V + + HS+ +
Sbjct: 485 VAFSPDSQSLASGSFDKSIKVWRLHANNYSGLAGSEVRSFIGHSQEVQSVAFS------- 537
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ G+ L SG DG V ++ + I H VWSV +S + ASGS
Sbjct: 538 -----SDGQTLASGSTDGTVKLWNWQSGKLIRTLLGHSDA-VWSVAFSPDGNTI-ASGSW 590
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKM 222
D T+++WD G V T++ + + V V F+P G +L + K + D
Sbjct: 591 DKTIKLWD--FSSGLPVRTLKGHSEQ--VHSVAFNPDGQTLASGDLGGTIKLWKMDTGSQ 646
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN 262
V GH V TLV+ D +KLW VN
Sbjct: 647 VG---TLKGHTDWVGVAFSKSGKTLVSGSFDDTIKLWKVN 683
>gi|297592121|gb|ADI46905.1| WDR57m [Volvox carteri f. nagariensis]
Length = 350
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 16/204 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L S D +D E + I + EH G V S +G + +G+DD T ++W
Sbjct: 110 GLALLSCAADKTTRCWDAESGLQIKKLGEHTGI-VNSCCPVRGGTNMFVTGADDATSKVW 168
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK--MVDPVLV 228
D R + V T++ S VC V F G + + G D +D+R+ DP L+
Sbjct: 169 DMR--AKRSVYTLR---SGFPVCAVAFADAGDQIYSGG-IDNIIKVWDLRRGSGSDPALL 222
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVG 281
GH TVT +R D L++ G D L+ W+V SR + + GHV+N +N +
Sbjct: 223 LKGHSDTVTGLRLSPDGSHLLSNGMDNTLREWDVRPYAPQSRCTKVFTGHVHNFEKNLLR 282
Query: 282 LSVWRHGGLLGCGSETNQVFVYDV 305
G + CGS V+++D
Sbjct: 283 CDYSPDGSKVACGSTDRMVYIWDA 306
>gi|145506384|ref|XP_001439154.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406335|emb|CAK71757.1| unnamed protein product [Paramecium tetraurelia]
Length = 512
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + + F P + A+G I R IR+++IK +A++ YI ++++
Sbjct: 221 SDYVMSVNFSPDGTTLASGSIDRSIRLWDIKK----GQQIAILHR------YI---SEVT 267
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G L SG D + +D++ + D H G V SV +S D ASG
Sbjct: 268 SVCFSP--DGTTLASGYKDMSIRLFDVKTGYSKTKDDHHFG-SVCSVCFST-DGTTIASG 323
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++ +WD + G+ + + S+ C F P G++L A+G +DK +DV K
Sbjct: 324 SSDKSICLWDVKT--GQLKAKLDGHTSKVMSVC--FSPDGTTL-ASGSSDKSIRLWDVEK 378
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+ V + DGH V + F D TL + D ++LW+VN
Sbjct: 379 RQEKVKL-DGHTSEVMSVCFSPDGTTLASGSIDRSIRLWDVN 419
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 12/210 (5%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++S+ + P G L SG D + +D + + H V SV++S L A
Sbjct: 15 VNSVNFSP--DGTTLASGSRDNSIRVWDAKTGQQKAKLGCHSST-VISVNFSPDGTTL-A 70
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS + ++ +WD + K V+ + V V F P G++L A+G D +DV
Sbjct: 71 SGSLNNSISLWDVKTGQEK----VKLDSHTRGVMSVCFSPDGTTL-ASGSQDNSICLWDV 125
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
F+GH + + F T + +G D + LWN + I GH+ R
Sbjct: 126 NTQQQQA-KFNGHSSCIRSVSFSPNLTTLASGGDTSICLWNAQTGQQIAKLDGHI--REV 182
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ + G L GS N + ++DV+ G+
Sbjct: 183 MSVCFSPDGTTLASGSADNSIRLWDVKTGQ 212
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 130/318 (40%), Gaps = 48/318 (15%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P + A+G IR+++ K+ + C + + S+
Sbjct: 15 VNSVNFSPDGTTLASGSRDNSIRVWDAKTGQQKAKLG-------------CHSSTVISVN 61
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G L SG + + +D++ + D H R V SV +S L ASGS D
Sbjct: 62 FSP--DGTTLASGSLNNSISLWDVKTGQEKVKLDSH-TRGVMSVCFSPDGTTL-ASGSQD 117
Query: 165 GTMQMWDPRCDGGKCVSTVQPSAS----RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
++ +WD V+T Q A S + V F P ++L + G D ++ +
Sbjct: 118 NSICLWD--------VNTQQQQAKFNGHSSCIRSVSFSPNLTTLASGG--DTSICLWNAQ 167
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ DGH + V + F D TL + D ++LW+V + GH +
Sbjct: 168 TG-QQIAKLDGHIREVMSVCFSPDGTTLASGSADNSIRLWDVKTGQQKAKLDGHSDYVMS 226
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV-HDFEPVTAAGSERGFVSSVCWRRVG 338
V S G L GS + ++D++ G+ + + H + SE V+SVC+
Sbjct: 227 VNFS--PDGTTLASGSIDRSIRLWDIKKGQQIAILHRYI------SE---VTSVCF---S 272
Query: 339 EDECTLVAGGSDGLLHVF 356
D TL +G D + +F
Sbjct: 273 PDGTTLASGYKDMSIRLF 290
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 30/265 (11%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + A+G IR++++K+ + HS DY + S+ + P
Sbjct: 187 FSPDGTTLASGSADNSIRLWDVKT---GQQKAKLDGHS---DYVM-------SVNFSP-- 231
Query: 110 SGRVLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G L SG D + +D++K ++ I R V SV +S L ASG D ++
Sbjct: 232 DGTTLASGSIDRSIRLWDIKKGQQIAILHRYI---SEVTSVCFSPDGTTL-ASGYKDMSI 287
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+++D + S + +VC V F G++ +A+G +DK +DV K
Sbjct: 288 RLFDVKTG----YSKTKDDHHFGSVCSVCFSTDGTT-IASGSSDKSICLWDV-KTGQLKA 341
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
DGH V + F D TL + +D ++LW+V + GH + V S
Sbjct: 342 KLDGHTSKVMSVCFSPDGTTLASGSSDKSIRLWDVEKRQEKVKLDGHTSEVMSVCFS--P 399
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPV 311
G L GS + ++DV +G+ +
Sbjct: 400 DGTTLASGSIDRSIRLWDVNFGQQI 424
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 130/326 (39%), Gaps = 38/326 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S ++ + F P + A+G + I ++++K+ V + H++ +P
Sbjct: 54 SSTVISVNFSPDGTTLASGSLNNSISLWDVKT---GQEKVKLDSHTRGVMSVCFSP---- 106
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G L SG D + +D+ + + + H + SV +S L + G
Sbjct: 107 --------DGTTLASGSQDNSICLWDVNTQQQQAKFNGHSS-CIRSVSFSPNLTTLASGG 157
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
D ++ +W+ + G+ ++ + C F P G++L A+G AD +DV K
Sbjct: 158 --DTSICLWNAQT--GQQIAKLDGHIREVMSVC--FSPDGTTL-ASGSADNSIRLWDV-K 209
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
DGH V + F D TL + D ++LW++ + I +++ V
Sbjct: 210 TGQQKAKLDGHSDYVMSVNFSPDGTTLASGSIDRSIRLWDIKKGQQIAILHRYISEVTSV 269
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S G L G + + ++DV+ G D G V SVC+ D
Sbjct: 270 CFS--PDGTTLASGYKDMSIRLFDVKTGYSKTKDDH--------HFGSVCSVCF---STD 316
Query: 341 ECTLVAGGSDGLLHVFVGKKKPLSAQ 366
T+ +G SD + ++ K L A+
Sbjct: 317 GTTIASGSSDKSICLWDVKTGQLKAK 342
>gi|218195828|gb|EEC78255.1| hypothetical protein OsI_17928 [Oryza sativa Indica Group]
Length = 950
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 27/269 (10%)
Query: 67 RIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEY 126
R Y ++ + PV + ++ + ++ LK TS RVL +G D V +
Sbjct: 7 RAYKLRILANSFPVF-------LTKEFVAHSSNVNCLKIGRKTS-RVLVTGGDDHKVNLW 58
Query: 127 DLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPS 186
+ K I H V SV++ + V A+G+ GT+++WD + K V T+ +
Sbjct: 59 AIGKPNSILSLSGHTSA-VESVNFDSTE-VFVAAGAASGTIKLWD--LEEAKIVRTL--T 112
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVD 245
RS V+FHPFG A+G D +D+R+ + + GH + V IRF D
Sbjct: 113 GHRSNCMSVDFHPFGE-FFASGSLDTNLKIWDIRRK-GCIHTYKGHTRGVNAIRFTPDGR 170
Query: 246 TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+V+ G D +KLW++ +++ +K H + H LL GS V +D
Sbjct: 171 WVVSGGEDNVVKLWDLTAGKLLHDFKCHEGQIQCIDFHP--HEFLLATGSSDKTVKFWD- 227
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCW 334
+ FE + + G E V S+ +
Sbjct: 228 -------LETFELIGSTGPETTGVRSMTF 249
>gi|449546147|gb|EMD37117.1| hypothetical protein CERSUDRAFT_115032 [Ceriporiopsis subvermispora
B]
Length = 834
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 136/323 (42%), Gaps = 35/323 (10%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICT 96
P +D I + F P S A+G R IRI++ ++ +V
Sbjct: 395 PLPGHTDGINSVAFSPDGSCVASGSDDRTIRIWDSRT------------GEQVVKPLTGH 442
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+ S+ + P G L SG D V +D + + + V+SV +S D
Sbjct: 443 EGHILSVAFSP--DGTQLASGSADKTVRLWDAGTGMEVAKPLTGHTGAVFSVAFSP-DGS 499
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
ASGSDD T+ +W+ G+ V +P + V V F P GS L+A+G ADK
Sbjct: 500 QIASGSDDCTICLWNAAT--GEEVG--EPLTGHEERVWSVAFSPNGS-LIASGSADKTIR 554
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVND-SRVIRTYKGH 273
+D R + + GH V + F D +V+ +DG +++W+ + + ++ K H
Sbjct: 555 IWDTRADAEGAKLLRGHMDDVYTVAFSADGTRVVSGSSDGSIRIWDASTGTETLKPLKRH 614
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVC 333
++V G + GS + ++D R G+ V P+T G V+SV
Sbjct: 615 --QGAIFSVAVSPDGAQIASGSYDGTIRLWDARTGKEV----IAPLTGHGDS---VTSVA 665
Query: 334 WRRVGEDECTLVAGGSDGLLHVF 356
+ D + +G DG + +F
Sbjct: 666 F---SPDGTRIASGSDDGTVRIF 685
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 138/329 (41%), Gaps = 47/329 (14%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYIC 95
P D + + F P + +G IR++++++ V P+ H+++
Sbjct: 180 PLTGHGDIVQSVVFSPDGTCVISGSSDCTIRVWDVRTGREVMEPLAG---HTRMITSVTI 236
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGD 154
+P G + SG D V +D+ + E + V SV +S G
Sbjct: 237 SP------------DGTRIASGSGDRTVRVWDMATGKEVTEPLQVHDNWVRSVAFSLDGS 284
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-----VCCVEFHPFGSSLVAAGC 209
++ SGSDD T+++WD + T +P A V V F P G +A+G
Sbjct: 285 KIV--SGSDDHTIRLWDAK--------TAEPRAETLTGHTGWVNSVAFAPDG-IYIASGS 333
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN-DSRVI 267
D+ ++ R + + GH +VT + FL D +V+ DG +++W+ D + I
Sbjct: 334 NDQSIRMWNTRTGQEVMEPLTGHTHSVTSVVFLPDGTQIVSGSNDGTIRVWDARMDEKAI 393
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG 327
+ GH + N V S G + GS+ + ++D R GE V +P+T G
Sbjct: 394 KPLPGHTDGINSVAFS--PDGSCVASGSDDRTIRIWDSRTGEQV----VKPLTG---HEG 444
Query: 328 FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ SV + D L +G +D + ++
Sbjct: 445 HILSVAF---SPDGTQLASGSADKTVRLW 470
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+++WD R G+ V+ +P + V V F P G+ + +G DK +
Sbjct: 115 ASGSIDRTIRVWDART--GEEVT--KPLTGHTGWVYSVAFSPDGTH-ITSGSDDKTIRIW 169
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGC-LKLWNVNDSR-VIRTYKGHVN 275
D R + V GH V + F T V +G+ C +++W+V R V+ GH
Sbjct: 170 DTRTAEEVVKPLTGHGDIVQSVVFSPDGTCVISGSSDCTIRVWDVRTGREVMEPLAGH-- 227
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG----EPVWVHD 315
R +++ G + GS V V+D+ G EP+ VHD
Sbjct: 228 TRMITSVTISPDGTRIASGSGDRTVRVWDMATGKEVTEPLQVHD 271
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 90/239 (37%), Gaps = 55/239 (23%)
Query: 160 SGSDDGTMQMWDPRCD---------------------GGKCVST---------------- 182
SGS+DGT+++WD R D G CV++
Sbjct: 374 SGSNDGTIRVWDARMDEKAIKPLPGHTDGINSVAFSPDGSCVASGSDDRTIRIWDSRTGE 433
Query: 183 --VQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI 239
V+P + + V F P G+ L A+G ADK +D ++ GH V +
Sbjct: 434 QVVKPLTGHEGHILSVAFSPDGTQL-ASGSADKTVRLWDAGTGMEVAKPLTGHTGAVFSV 492
Query: 240 RFLDVDTLVTAGTDGC-LKLWN-VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSET 297
F + + +G+D C + LWN V GH V S +G L+ GS
Sbjct: 493 AFSPDGSQIASGSDDCTICLWNAATGEEVGEPLTGHEERVWSVAFS--PNGSLIASGSAD 550
Query: 298 NQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ ++D R D E A RG + V D +V+G SDG + ++
Sbjct: 551 KTIRIWDTR-------ADAE---GAKLLRGHMDDVYTVAFSADGTRVVSGSSDGSIRIW 599
>gi|297828095|ref|XP_002881930.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297327769|gb|EFH58189.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 42/309 (13%)
Query: 7 HQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVS---DSIGVIEFDPSDSVFATGGIA 63
H PQ N + R SS +P +S ++ ++F+P+ ++ A+G
Sbjct: 25 HSAPQGPGPNGKNR----------TSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHD 74
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
R+I ++ + H ++ + K + L + G + S D V
Sbjct: 75 REIFLWRV--------------HGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTV 120
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
+D+E I + EH V S ++ P L SGSDDGT ++WD R G +
Sbjct: 121 RAWDVETGKQIKKMAEHSSF-VNSCCPTRRGPPLVISGSDDGTAKLWDMRQRGA-----I 174
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-L 242
Q + + V F + G D +D+RK + + +GH+ T+T +
Sbjct: 175 QTFPDKYQITAVSFSDAADKIFTGG-VDNDVKVWDLRKG-EATMTLEGHQDTITGMSLSP 232
Query: 243 DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSE 296
D L+T G D L +W++ +R ++ + GH +N +N + S G + GS
Sbjct: 233 DGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFDGHQHNFEKNLLKCSWSPDGTKVTAGSS 292
Query: 297 TNQVFVYDV 305
V ++D
Sbjct: 293 DRMVHIWDT 301
>gi|222629775|gb|EEE61907.1| hypothetical protein OsJ_16629 [Oryza sativa Japonica Group]
Length = 944
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 27/269 (10%)
Query: 67 RIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEY 126
R Y ++ + PV + ++ + ++ LK TS RVL +G D V +
Sbjct: 7 RAYKLRILANSFPVF-------LTKEFVAHSSNVNCLKIGRKTS-RVLVTGGDDHKVNLW 58
Query: 127 DLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPS 186
+ K I H V SV++ + V A+G+ GT+++WD + K V T+ +
Sbjct: 59 AIGKPNSILSLSGHTSA-VESVNFDSTE-VFVAAGAASGTIKLWD--LEEAKIVRTL--T 112
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVD 245
RS V+FHPFG A+G D +D+R+ + + GH + V IRF D
Sbjct: 113 GHRSNCMSVDFHPFGE-FFASGSLDTNLKIWDIRRK-GCIHTYKGHTRGVNAIRFTPDGR 170
Query: 246 TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+V+ G D +KLW++ +++ +K H + H LL GS V +D
Sbjct: 171 WVVSGGEDNVVKLWDLTAGKLLHDFKCHEGQIQCIDFHP--HEFLLATGSSDKTVKFWD- 227
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCW 334
+ FE + + G E V S+ +
Sbjct: 228 -------LETFELIGSTGPETTGVRSMTF 249
>gi|158340182|ref|YP_001521352.1| WD-containing repeat protein [Acaryochloris marina MBIC11017]
gi|158310423|gb|ABW32038.1| WD repeat protein [Acaryochloris marina MBIC11017]
Length = 1484
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 27/233 (11%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ I F PS+ V A+ G + I+++NIKS + + +H V + +L
Sbjct: 996 SVRAIVFSPSEDVLASAGHSSYIKLWNIKS---GKCIKTLDEHLGV----------VRAL 1042
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
K+ P +G +L SG D + ++L+ H R +WSVD+S L ++G D
Sbjct: 1043 KFSP--NGDILASGGKDTDIRLWNLKSGKCENTLKGH-SRPIWSVDFSNNGSFLASAGED 1099
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
+ +WD + D S V+ ++ V V FHP S+L+ +G DK + + M+
Sbjct: 1100 KNVL-IWDLKSDNIVSRSLVK---HKNWVRSVSFHP-KSTLLVSGSEDK---SVQICNML 1151
Query: 224 DPVL--VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
G V I F D T+ +A D +KLWN+ ++ + + H
Sbjct: 1152 TNACQKTLQGRTNWVWAISFSYDSTTIASATEDTSVKLWNIETGKIKKKFSDH 1204
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 26/278 (9%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P+D A+ G IRI+N+ S D + H+ + SL
Sbjct: 1207 SVRTLSFHPNDKYLASAGDDEIIRIWNVDS---DKEFKILKGHTNW----------IRSL 1253
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
++ P G+ L SG D + ++ K E+ + ++ + G ++ + G +
Sbjct: 1254 EFSP--DGQFLVSGSNDNTIRLWE-TKAWECHRLYEYHTDTIRAISFDPGSRIIASVG-E 1309
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D + W D C V SA + V F G LVA G D ++ + V
Sbjct: 1310 DRRLVFWSTDSDR-PC--KVVDSAHSKRLTSVVFSSDGK-LVATGGEDHLIKLWNSQTGV 1365
Query: 224 DPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+L GH V + FL + LV+A +D +K+W++N + I GH V +
Sbjct: 1366 K-LLELKGHSNYVNSLCFLSQSSRLVSASSDNLVKIWDINSGKCIYDLIGHTGGVYSVTM 1424
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT 320
S + G + CG + +++ ++D+ +P V D +P +
Sbjct: 1425 S--KTGEVASCGHD-DKIILWDLDTRQPSKVFDNKPYS 1459
Score = 52.0 bits (123), Expect = 5e-04, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 13/195 (6%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L SG YD ++ +D+ + + E +H G V SV +S AS SDDG +++ +
Sbjct: 925 LASGSYDRKIIIWDVRDRSKVIELKDHTG-TVRSVAFSSSGEYF-ASASDDG--KIFIRQ 980
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVFDGH 232
K ++++ +V + F P L +AG + K + K + D H
Sbjct: 981 TSNWKVITSIDEQL--GSVRAIVFSPSEDVLASAGHSSYIKLWNIKSGKCIK---TLDEH 1035
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
V ++F + D L + G D ++LWN+ + T KGH +R + +G L
Sbjct: 1036 LGVVRALKFSPNGDILASGGKDTDIRLWNLKSGKCENTLKGH--SRPIWSVDFSNNGSFL 1093
Query: 292 GCGSETNQVFVYDVR 306
E V ++D++
Sbjct: 1094 ASAGEDKNVLIWDLK 1108
>gi|90398971|emb|CAJ86243.1| H0801D08.1 [Oryza sativa Indica Group]
Length = 909
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 20/245 (8%)
Query: 91 DYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDY 150
+ ++ + ++ LK TS RVL +G D V + + K I H V SV++
Sbjct: 32 EEFVAHSSNVNCLKIGRKTS-RVLVTGGDDHKVNLWAIGKPNSILSLSGHTSA-VESVNF 89
Query: 151 SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA 210
+ V A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G
Sbjct: 90 DSTE-VFVAAGAASGTIKLWD--LEEAKIVRTL--TGHRSNCMSVDFHPFGE-FFASGSL 143
Query: 211 DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRT 269
D +D+R+ + + GH + V IRF D +V+ G D +KLW++ +++
Sbjct: 144 DTNLKIWDIRRK-GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNVVKLWDLTAGKLLHD 202
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFV 329
+K H + H LL GS V +D + FE + + G E V
Sbjct: 203 FKCHEGQIQCIDFHP--HEFLLATGSSDKTVKFWD--------LETFELIGSTGPETTGV 252
Query: 330 SSVCW 334
S+ +
Sbjct: 253 RSMTF 257
>gi|75907778|ref|YP_322074.1| ribosome assembly protein 4 [Anabaena variabilis ATCC 29413]
gi|75701503|gb|ABA21179.1| ribosome assembly protein 4 (RSA4) [Anabaena variabilis ATCC 29413]
Length = 1652
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 30/270 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SDS+ I + PS+ A+G I+I+++ + + + HS D+ +
Sbjct: 1338 SDSVISIAYSPSEKQLASGSGDNIIKIWDVST---GQTLKTLSGHS---DW-------VR 1384
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P +G+ L SG D + +D+ P+ H R V SV YS L AS
Sbjct: 1385 SITYSP--NGKQLASGSGDKTIKIWDVSTGQPVKTLLGHKDR-VISVAYSPDGQQL-ASA 1440
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR- 220
S D T+++WD + G+ + T+ + S V V + P G L +A DK +D+
Sbjct: 1441 SGDTTIKIWD--VNSGQLLKTL--TGHSSWVRSVTYSPDGKQLASAS-DDKTIKIWDISS 1495
Query: 221 -KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
K++ GH+ +V + + + A +D +K+W+V+ + ++T GH N
Sbjct: 1496 GKLLK---TLSGHQDSVKSVAYSPDGKQLAAASDN-IKIWDVSSGKPLKTLTGHSNWVRS 1551
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G L S N + ++DV G+
Sbjct: 1552 VAYS--PDGQQLASASRDNTIKIWDVSSGQ 1579
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 30/252 (11%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + T+ + S SD + I + P+ A+G + I+I+++ + PV
Sbjct: 1365 WDVSTGQTLKTLSGH----SDWVRSITYSPNGKQLASGSGDKTIKIWDVST---GQPVKT 1417
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
++ H ++ S+ + P G+ L S D + +D+ + H
Sbjct: 1418 LLGHKD----------RVISVAYSP--DGQQLASASGDTTIKIWDVNSGQLLKTLTGHSS 1465
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V SV YS L AS SDD T+++WD GK + T+ S + +V V + P G
Sbjct: 1466 W-VRSVTYSPDGKQL-ASASDDKTIKIWD--ISSGKLLKTL--SGHQDSVKSVAYSPDGK 1519
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
L AA K +DV P+ GH V + + D L +A D +K+W+V
Sbjct: 1520 QLAAASDNIK---IWDVSSG-KPLKTLTGHSNWVRSVAYSPDGQQLASASRDNTIKIWDV 1575
Query: 262 NDSRVIRTYKGH 273
+ +V++T GH
Sbjct: 1576 SSGQVLKTLTGH 1587
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 38/276 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+S+ I + P A+ + I+I+++ + P+ + HS +
Sbjct: 1296 SNSVYSIAYSPDGKQLASASGDKTIKIWDVS---ISKPLKILSGHSD----------SVI 1342
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P S + L SG D ++ +D+ + H V S+ YS L ASG
Sbjct: 1343 SIAYSP--SEKQLASGSGDNIIKIWDVSTGQTLKTLSGHSDW-VRSITYSPNGKQL-ASG 1398
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSAS----RSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S D T+++WD VST QP + + V V + P G L +A D +
Sbjct: 1399 SGDKTIKIWD--------VSTGQPVKTLLGHKDRVISVAYSPDGQQLASAS-GDTTIKIW 1449
Query: 218 DVR--KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
DV +++ + ++VTY D L +A D +K+W+++ ++++T GH +
Sbjct: 1450 DVNSGQLLKTLTGHSSWVRSVTYSP--DGKQLASASDDKTIKIWDISSGKLLKTLSGHQD 1507
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ V S G L S+ + ++DV G+P+
Sbjct: 1508 SVKSVAYS--PDGKQLAAASD--NIKIWDVSSGKPL 1539
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 74/311 (23%), Positives = 128/311 (41%), Gaps = 34/311 (10%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
F ++ A + ++ WD N T+ + S SDS+ I + P A+G
Sbjct: 1052 FAPQKRQLASGSGDKTVKIWDINSGKTLKTLSGH----SDSVISIAYSPDGQQLASGSGD 1107
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
+ I+I++I S + + HS +P K + L S D V
Sbjct: 1108 KTIKIWDINS---GKTLKTLSGHSDSVINIAYSPNK------------QQLASASDDKTV 1152
Query: 124 MEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVS 181
+D+ K + H R SV YS L AS S D T+++WD + G+ +
Sbjct: 1153 KIWDINSGKSLKTLSGHSHAVR---SVTYSPDGKRL-ASASRDKTIKIWD--INSGQLLK 1206
Query: 182 TVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
T+ S V + + P G L +A +DK +D+ + H + V I +
Sbjct: 1207 TL--SGHSDGVISIAYSPDGKHLASAS-SDKTIKIWDISNG-QLLKTLSSHDQPVYSIAY 1262
Query: 242 L-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
+ LV+ D +K+W+V+ S++++T GH N+ + S G L S +
Sbjct: 1263 SPNGQQLVSVSGDKTIKIWDVSSSQLLKTLSGHSNSVYSIAYS--PDGKQLASASGDKTI 1320
Query: 301 FVYDVRWGEPV 311
++DV +P+
Sbjct: 1321 KIWDVSISKPL 1331
>gi|119177669|ref|XP_001240587.1| hypothetical protein CIMG_07750 [Coccidioides immitis RS]
gi|320032022|gb|EFW13978.1| U5 snRNP complex subunit [Coccidioides posadasii str. Silveira]
Length = 359
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 150/374 (40%), Gaps = 67/374 (17%)
Query: 17 ERARCEWDF--NLRTTVSSSSSPNAAVSDSIG--------------------VIEFDPSD 54
+R R + D N VSSS+S N A+ +I FDP+
Sbjct: 19 KRQRSDADLGNNNALAVSSSTSQNGALMKAIPRTSGLEAPIMELTGHTGEVFATRFDPTG 78
Query: 55 SVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVL 114
A+GG+ R I ++ + + +Y + T K + L R++
Sbjct: 79 QHIASGGMDRSILLWRT--------------YGQCENYGVMTGHKGAVLDLHWSRDSRII 124
Query: 115 GSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSKGDPVLGASGSDDGTMQMWDPR 173
S D + +DLE I R G V + +D SK L SGSDDG + +WDPR
Sbjct: 125 FSASADMTLASWDLESGERI--RRHVGHEEVINCLDLSKRGQELLISGSDDGCIGIWDPR 182
Query: 174 -CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
D + T P + V G+ + + G D + +D+RK V GH
Sbjct: 183 KKDAIDFLETEMP------ITAVALAEAGNEIYSGGI-DNDIHVWDIRKR-SIVYSMIGH 234
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHVN--NRNFVGLSVW 285
TVT ++ D +L++ D ++ W++ R I+TY G +N + S
Sbjct: 235 TDTVTSLQISPDSQSLLSNSHDSTVRTWDIRPFAPADRHIKTYDGATTGLEKNLIRASWS 294
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
+G + GS V ++D + + ++ +G V+ V R DE +V
Sbjct: 295 PNGEKIAAGSGDRSVVIWDTKSAKILY--------KLPGHKGVVNDV--RFAPNDEPIIV 344
Query: 346 AGGSDGLLHVFVGK 359
+G SD +F+G+
Sbjct: 345 SGSSDRC--IFLGE 356
>gi|221119144|ref|XP_002158592.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like [Hydra
magnipapillata]
Length = 559
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 24/228 (10%)
Query: 46 GVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKW 105
I+ DPS + + ++++N++ + P+ + H K ++SS+ +
Sbjct: 322 ATIDLDPSLVNMVSCSVDGSVQLWNLQD---EEPLGRIDSHDK----------RVSSVAF 368
Query: 106 KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
P SGR LG+ +D +D EK+V + ++ H + V+ + + + D L A+ D
Sbjct: 369 HP--SGRFLGTTCFDKSWRLWDFEKQVEVLHQEGH-AQEVFKICF-QVDGSLAATCGLDA 424
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
+WD R G+ + + + V ++FH G L A G D+K +D+RK +
Sbjct: 425 RGLIWDLRT--GRNIFALDGHLKK--VLAIDFHSNGFQL-ATGSEDQKCMIWDLRKQ-EA 478
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ H V++++F D + L+T+ DG K+W+ ++T GH
Sbjct: 479 IYTIPAHNNLVSHLKFCD-NILLTSSYDGLAKVWSYPSWAPLKTLAGH 525
>gi|72110055|ref|XP_795434.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4
[Strongylocentrotus purpuratus]
Length = 502
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 46 GVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKW 105
+ P+ A+ +++++ +S + PV + H A++S +++
Sbjct: 265 ATLSLSPNACCMASCSADGAVKLWSFES---EEPVANIEGHE----------ARVSRVEY 311
Query: 106 KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
P SGR LG+ +D +DLE + I ++ H + V+S+D+ K D + A+G D
Sbjct: 312 HP--SGRFLGTACFDSSWRLWDLEVQEEILHQEGH-SKAVYSIDFQK-DGAICATGGMDA 367
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
++WD R G+C+ ++ +V V F P G L A G D A +D+R+
Sbjct: 368 FGRLWDLRT--GRCIMFLE--GHLKSVLAVNFSPNGYQL-ATGSEDNTAKIWDMRQR-KV 421
Query: 226 VLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ H+ +T ++F D L+T DG K+W + T GH
Sbjct: 422 LYTIPAHQNLITGLKFQGTTGDYLITCSYDGTAKVWAHPGWSPLNTLAGH 471
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS S DG +++W + + V+ ++ +R V VE+HP G L A C D +D
Sbjct: 277 ASCSADGAVKLWS--FESEEPVANIEGHEAR--VSRVEYHPSGRFLGTA-CFDSSWRLWD 331
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ ++ + +L +GH K V I F D T G D +LW++ R I +GH+ +
Sbjct: 332 L-EVQEEILHQEGHSKAVYSIDFQKDGAICATGGMDAFGRLWDLRTGRCIMFLEGHLKSV 390
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
V S +G L GSE N ++D+R
Sbjct: 391 LAVNFSP--NGYQLATGSEDNTAKIWDMR 417
>gi|145509981|ref|XP_001440929.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408157|emb|CAK73532.1| unnamed protein product [Paramecium tetraurelia]
Length = 2569
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+ ++S+ + P G +L SG YD + +D++ + D H V SV++S L
Sbjct: 2301 SAVASVNFSP--DGTILASGSYDNSIRLWDVKTGQQKAKLDGHSNY-VMSVNFSPDSTTL 2357
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D ++++WD + K + + V V F P G++L A+G DK + +
Sbjct: 2358 -ASGSYDNSIRLWDVKTGQQK----AKLDGHSNYVMSVNFSPDGTTL-ASGSYDKSIHLW 2411
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
DV K FDGH TV + F D TL + D ++LW+V + +GH
Sbjct: 2412 DV-KTGQQKAKFDGHSNTVYSVNFSPDGTTLASGSYDNSIRLWDVKTGQQKPILEGH 2467
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 33/205 (16%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S ++ + F P ++ A+G IR++++K+ + HS +
Sbjct: 2300 SSAVASVNFSPDGTILASGSYDNSIRLWDVKT---GQQKAKLDGHSNY----------VM 2346
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P ++ L SG YD + +D++ + D H V SV++S L ASG
Sbjct: 2347 SVNFSPDST--TLASGSYDNSIRLWDVKTGQQKAKLDGH-SNYVMSVNFSPDGTTL-ASG 2402
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSAS----RSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
S D ++ +WD V T Q A + V V F P G++L A+G D +
Sbjct: 2403 SYDKSIHLWD--------VKTGQQKAKFDGHSNTVYSVNFSPDGTTL-ASGSYDNSIRLW 2453
Query: 218 DVRK-MVDPVLVFDGHRKTVTYIRF 241
DV+ P+L +GH + V + F
Sbjct: 2454 DVKTGQQKPIL--EGHSRCVRSVCF 2476
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 19/178 (10%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
SAV V F P G+ ++A+G D +DV K DGH V + F D TL
Sbjct: 2301 SAVASVNFSPDGT-ILASGSYDNSIRLWDV-KTGQQKAKLDGHSNYVMSVNFSPDSTTLA 2358
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ D ++LW+V + GH N V S G L GS + ++DV+ G
Sbjct: 2359 SGSYDNSIRLWDVKTGQQKAKLDGHSNYVMSVNFS--PDGTTLASGSYDKSIHLWDVKTG 2416
Query: 309 EPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG---LLHVFVGKKKPL 363
+ D G ++V D TL +G D L V G++KP+
Sbjct: 2417 QQKAKFD-----------GHSNTVYSVNFSPDGTTLASGSYDNSIRLWDVKTGQQKPI 2463
>gi|121709131|ref|XP_001272317.1| U5 snRNP complex subunit, putative [Aspergillus clavatus NRRL 1]
gi|119400466|gb|EAW10891.1| U5 snRNP complex subunit, putative [Aspergillus clavatus NRRL 1]
Length = 359
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 147/368 (39%), Gaps = 63/368 (17%)
Query: 17 ERARCEWDFNLRTTVSSSSSPNAAV--------------------SDSIGVIEFDPSDSV 56
+R + + D N T V SSS N + S + + FDP+
Sbjct: 21 KRKKSDGDLNAGTAVVKSSSQNGTLVQAIPRTSGLDAPIMELTGHSGEVFAVRFDPTAQH 80
Query: 57 FATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
A+G + R I ++N + + +Y I T + + L + R + S
Sbjct: 81 IASGSMDRSILLWNT--------------YGQCENYGILTGHRGAVLDLQWSRDSRAIFS 126
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSKGDPVLGASGSDDGTMQMWDPRC- 174
D + ++D+E I R G + + +D SK L SGS+DG + +WDPR
Sbjct: 127 ASADMTIADWDVETGQRI--RRHVGHEEIINCLDISKRGQELLVSGSNDGCIGIWDPRQK 184
Query: 175 DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRK 234
D + + T P + V G+ + + G D Y +D+RK GH
Sbjct: 185 DAIEYLETELP------ITAVALSEAGNEIYSGGI-DNTIYVWDLRKKA-VAYSMSGHTD 236
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVN--NRNFVGLSVWRH 287
T+T + D +L++ D ++ W++ +R IRTY G +N + S
Sbjct: 237 TITSLEISPDSQSLLSNSHDSTVRTWDIRPFAPTNRHIRTYDGAPMGLEKNLIKASWDPK 296
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G + GS V V+D + G+ ++ +G V+ V R +E +V+G
Sbjct: 297 GEKIAAGSGDRSVVVWDFKSGKLLY--------KLPGHKGTVNDV--RFSPNNEPIIVSG 346
Query: 348 GSDGLLHV 355
SD L +
Sbjct: 347 SSDRTLML 354
>gi|425454683|ref|ZP_18834411.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389804592|emb|CCI16280.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 350
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 24/232 (10%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D + + F P +G + I+++N+++ + H K + +P
Sbjct: 71 DFVQSVNFSPDGKTLVSGSRDKTIKLWNVET---GQEIRTFKGHDKTVNSVNFSP----- 122
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
G+ L SG D + +++E I H G V SV++S L SGS
Sbjct: 123 -------DGKTLVSGSLDKTIKLWNVETGQEIRTLKGHDGY-VQSVNFSPDGKTL-VSGS 173
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+++W+ + G+ + T++ V V F P G +LV+ G D ++V +
Sbjct: 174 YDTTIKLWN--VETGQEIRTIK--GHDDFVQSVNFSPDGKTLVS-GSYDTTIKLWNV-ET 227
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ GH V + F D TLV+ D +KLWNV + IRT KGH
Sbjct: 228 GQEIRTLKGHNDFVQSVNFSPDGKTLVSGSYDTTIKLWNVETGQEIRTLKGH 279
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SGS D T++ W + G+ + T++ + V V F P G +LV+ G D ++
Sbjct: 2 VSGSWDNTIRFW--TVETGQEIRTLK--GNEGYVESVNFSPDGKTLVS-GSWDNTIKLWN 56
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
V K + + GH V + F D TLV+ D +KLWNV + IRT+KGH
Sbjct: 57 VEKGQE-IRTIKGHDDFVQSVNFSPDGKTLVSGSRDKTIKLWNVETGQEIRTFKGHDKTV 115
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
N V S G L GS + +++V G+ E T G + G+V SV
Sbjct: 116 NSVNFS--PDGKTLVSGSLDKTIKLWNVETGQ-------EIRTLKGHD-GYVQSV---NF 162
Query: 338 GEDECTLVAGGSDGLLHVF 356
D TLV+G D + ++
Sbjct: 163 SPDGKTLVSGSYDTTIKLW 181
>gi|443313203|ref|ZP_21042815.1| WD40 repeat-containing protein [Synechocystis sp. PCC 7509]
gi|442776608|gb|ELR86889.1| WD40 repeat-containing protein [Synechocystis sp. PCC 7509]
Length = 1184
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 30/265 (11%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P + AT G R+IR++++ ++ +P + HS+ ++ S+
Sbjct: 643 SVNTVAFSPDGRILATSGQDREIRLWDLTNI--KNPPRILQGHSE----------RVWSV 690
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASG 161
+ P GR+L S D + +DL + + G W SV +S + ASG
Sbjct: 691 AFSP--DGRLLASASEDKAIALWDLATGNCQYLQ----GHTNWVRSVAFSPDSQTI-ASG 743
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD + +C++ + A S + V F G L A+ D+ +DV+
Sbjct: 744 SYDQTLRLWDVKSR--QCLNII--PAHTSVITAVTFSNNGRWL-ASSSYDQTLKLWDVQT 798
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ F GH V + F D TLV+ D LWN+ RT GH N+ +
Sbjct: 799 G-NCYKTFIGHTNRVWSVAFSPDSRTLVSGADDHATALWNIKTGECDRTIIGHTNSVLAI 857
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV 305
LS G L G E + ++++
Sbjct: 858 ALS--NDGNFLASGHEDQNIRLWNL 880
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 78/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++ + + F P +G ++NIK+ D ++ H+ S
Sbjct: 809 TNRVWSVAFSPDSRTLVSGADDHATALWNIKTGECDRTIIG---HTN------------S 853
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L G L SG D + ++L ++ RVWSV ++ + +L A+G
Sbjct: 854 VLAIALSNDGNFLASGHEDQNIRLWNLALN-QCYQTIPGHTNRVWSVAFAPTEELL-ATG 911
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ + G+C+ T+ S V V F P G+ L +A D+ ++V K
Sbjct: 912 SADRTIKLWNYK--SGECLRTIL--GHSSWVWSVVFSPDGNYLASAS-YDQTIKLWEV-K 965
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ H+ +VT + F D L ++ D +K+W V + I T++GH N+ V
Sbjct: 966 TGKCLQTLADHKASVTAVAFSPDGKYLASSSFDQTVKVWEVCTGKCIFTFQGHTNSVWAV 1025
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWG----------EPVWVHDFEPVTAAGSERGFVS 330
S G L GS + V+++ G PV ++P+ E F +
Sbjct: 1026 SFS--PDGQQLASGSFDCSIRVWNIATGVCTHILTGHTAPVTSISYQPI-----EMAFPT 1078
Query: 331 SVCWRRVG-------------EDECTLVAGGSDGLLH 354
+ WR V ECT G G+++
Sbjct: 1079 ADNWRLVSGSFDQTIRQWNLFNGECTQTLSGHTGIVY 1115
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 24/227 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G + +R++++KS + + A H+ V T S+
Sbjct: 731 VAFSPDSQTIASGSYDQTLRLWDVKSRQCLNIIPA---HTSVI-----TAVTFSN----- 777
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+GR L S YD + +D++ ++ RVWSV +S L SG+DD
Sbjct: 778 --NGRWLASSSYDQTLKLWDVQTG-NCYKTFIGHTNRVWSVAFSPDSRTL-VSGADDHAT 833
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+W+ + G+C T+ ++V + G+ L A+G D+ +++ +
Sbjct: 834 ALWNIKT--GECDRTI--IGHTNSVLAIALSNDGNFL-ASGHEDQNIRLWNL-ALNQCYQ 887
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGH 273
GH V + F + L+ G+ D +KLWN +RT GH
Sbjct: 888 TIPGHTNRVWSVAFAPTEELLATGSADRTIKLWNYKSGECLRTILGH 934
>gi|90399039|emb|CAJ86235.1| H0402C08.11 [Oryza sativa Indica Group]
Length = 923
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 20/245 (8%)
Query: 91 DYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDY 150
+ ++ + ++ LK TS RVL +G D V + + K I H V SV++
Sbjct: 32 EEFVAHSSNVNCLKIGRKTS-RVLVTGGDDHKVNLWAIGKPNSILSLSGHTSA-VESVNF 89
Query: 151 SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA 210
+ V A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G
Sbjct: 90 DSTE-VFVAAGAASGTIKLWD--LEEAKIVRTL--TGHRSNCMSVDFHPFGE-FFASGSL 143
Query: 211 DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRT 269
D +D+R+ + + GH + V IRF D +V+ G D +KLW++ +++
Sbjct: 144 DTNLKIWDIRRK-GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNVVKLWDLTAGKLLHD 202
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFV 329
+K H + H LL GS V +D + FE + + G E V
Sbjct: 203 FKCHEGQIQCIDFHP--HEFLLATGSSDKTVKFWD--------LETFELIGSTGPETTGV 252
Query: 330 SSVCW 334
S+ +
Sbjct: 253 RSMTF 257
>gi|320170777|gb|EFW47676.1| WD repeat-containing protein SAZD [Capsaspora owczarzaki ATCC
30864]
Length = 1038
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 22/219 (10%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDP--RCDGGKCVSTVQPSASRSA----VCCVEFH 198
+ SV S+ +GS D T+++WD G S +Q ++ A + +
Sbjct: 470 IGSVALSRKTRNFAVTGSQDRTIKLWDLLGAIHNGSETSRMQARMTQKAHDKDINTIAIS 529
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLK 257
P L+A G DK A + + V V GHR+ + ++F VD + T+ D +K
Sbjct: 530 P-NDKLIATGSQDKTAKLWSSEDL-SLVGVLRGHRRGIWSVQFSPVDQCIATSSGDKTIK 587
Query: 258 LWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
LW ++D ++T++GH N+ + + R L+ CGS+ V ++ +R E V D
Sbjct: 588 LWALSDLSCLKTFEGHSNSVLKIAF-ITRGLQLVSCGSD-GLVKLWTIRTNECVATMD-- 643
Query: 318 PVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
G V V DE +V+GG+DG+++V+
Sbjct: 644 ---------GHEEKVWALAVSSDEERIVSGGADGVMNVW 673
>gi|440755598|ref|ZP_20934800.1| WD domain, G-beta repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440175804|gb|ELP55173.1| WD domain, G-beta repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 394
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 146/353 (41%), Gaps = 63/353 (17%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS-----VLVDHP--VVAV----------------- 83
+ F P +G + I+++N+K+ L H V +V
Sbjct: 23 VSFSPDGKTLVSGSRDKTIKLWNVKTGKEIRTLKGHDSYVYSVNFSPDGKTLVSGSWDKT 82
Query: 84 -----VDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERD 138
V+ K +++ S+ + P G+ L SG D + +++E I
Sbjct: 83 IKLWNVETGKEIRTLKGHNSRVRSVNFSP--DGKTLVSGSEDKTIKLWNVETGQEIGTLR 140
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
H G V SV +S L AS S D T+++W+ GK + T+ S V V F
Sbjct: 141 GHNG-IVLSVSFSSDGKTL-ASSSYDNTIKLWNVE---GKEIRTL--SGHNREVNSVNFS 193
Query: 199 PFGSSL-----VAAGCADKKAYAYDVRKMVD----PVLVFD--GHRKTVTYIRFL-DVDT 246
P G L + D ++V + P+ +++ GH K+VT + F D T
Sbjct: 194 PDGKKLATGSGILISVRDNTIKLWNVETGQEIRTLPLQLYENTGHNKSVTSVSFSPDGKT 253
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
L + D +KLWNV + IRT GH +N N V S G L GS+ + +++V
Sbjct: 254 LASGSYDETIKLWNVETGQEIRTLTGHNSNVNSVSFS--PDGKTLATGSDDGTIKLWNVE 311
Query: 307 WGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGK 359
G+ + +T S V+SV + G+ TL G SDG + ++ G+
Sbjct: 312 TGKEI-----RTLTGHNST---VTSVSFSPDGK---TLATGSSDGTIKLWNGE 353
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P +G + I+++N+++ + + H+ + L
Sbjct: 107 VNFSPDGKTLVSGSEDKTIKLWNVET---GQEIGTLRGHNGIV------------LSVSF 151
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD---- 163
+ G+ L S YD + +++E K I H R V SV++S L A+GS
Sbjct: 152 SSDGKTLASSSYDNTIKLWNVEGK-EIRTLSGHN-REVNSVNFSPDGKKL-ATGSGILIS 208
Query: 164 --DGTMQMWDPRCDGGKCVSTV-----QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
D T+++W+ + G+ + T+ + + +V V F P G +L A+G D+
Sbjct: 209 VRDNTIKLWN--VETGQEIRTLPLQLYENTGHNKSVTSVSFSPDGKTL-ASGSYDETIKL 265
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
++V + + GH V + F D TL T DG +KLWNV + IRT GH
Sbjct: 266 WNV-ETGQEIRTLTGHNSNVNSVSFSPDGKTLATGSDDGTIKLWNVETGKEIRTLTGH-- 322
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
N +S G L GS + +++ +G
Sbjct: 323 NSTVTSVSFSPDGKTLATGSSDGTIKLWNGEYG 355
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 17/134 (12%)
Query: 38 NAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTP 97
N + S+ + F P A+G I+++N+++ + + H+
Sbjct: 235 NTGHNKSVTSVSFSPDGKTLASGSYDETIKLWNVET---GQEIRTLTGHN---------- 281
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+ ++S+ + P G+ L +G DG + +++E I H V SV +S L
Sbjct: 282 SNVNSVSFSP--DGKTLATGSDDGTIKLWNVETGKEIRTLTGH-NSTVTSVSFSPDGKTL 338
Query: 158 GASGSDDGTMQMWD 171
A+GS DGT+++W+
Sbjct: 339 -ATGSSDGTIKLWN 351
>gi|425462829|ref|ZP_18842296.1| Vegetative incompatibility protein HET-E-1 (fragment) [Microcystis
aeruginosa PCC 9808]
gi|389824100|emb|CCI27299.1| Vegetative incompatibility protein HET-E-1 (fragment) [Microcystis
aeruginosa PCC 9808]
Length = 394
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 147/353 (41%), Gaps = 63/353 (17%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS-----VLVDH-PVVAVVDHS-------------K 88
+ F P +G + I+++N+K+ L H V V+ S
Sbjct: 23 VSFSPDGKTLVSGSRDKTIKLWNVKTGKEIRTLKGHDSYVYSVNFSTDGKTLVSGSWDKT 82
Query: 89 VCDYYICTPAKLSSLK----------WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERD 138
+ + + T ++ +LK + P G+ L SG D + +++E I
Sbjct: 83 IKLWNVETGQEIRTLKGHNSRVRSVNFSP--DGKTLVSGSEDKTIKLWNVETGQEIGTLR 140
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
H G V SV +S L AS S D T+++W+ GK + T+ S V V F
Sbjct: 141 GHNG-IVLSVSFSSDGKTL-ASSSYDNTIKLWNVE---GKEIRTL--SGHNREVNSVNFS 193
Query: 199 PFGSSL-----VAAGCADKKAYAYDVRKMVD----PVLVFD--GHRKTVTYIRFL-DVDT 246
P G L + D ++V + P+ +++ GH K+VT + F D T
Sbjct: 194 PDGKKLATGSGILISVRDNTIKLWNVETGQEIRTLPLQLYENTGHNKSVTSVSFSPDGKT 253
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
L + D +KLWNV + IRT GH +N N V S G L GS+ + +++V
Sbjct: 254 LASGSYDETIKLWNVETGQEIRTLTGHNSNVNSVSFS--PDGKTLATGSDDGTIKLWNVE 311
Query: 307 WGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGK 359
G+ + +T S V+SV + D TL G SDG + ++ G+
Sbjct: 312 TGKEI-----RTLTGHNST---VTSVSFS---PDGKTLATGSSDGTIKLWNGE 353
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P +G + I+++N+++ + + H+ + L
Sbjct: 107 VNFSPDGKTLVSGSEDKTIKLWNVET---GQEIGTLRGHNGIV------------LSVSF 151
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD---- 163
+ G+ L S YD + +++E K I H R V SV++S L A+GS
Sbjct: 152 SSDGKTLASSSYDNTIKLWNVEGK-EIRTLSGHN-REVNSVNFSPDGKKL-ATGSGILIS 208
Query: 164 --DGTMQMWDPRCDGGKCVSTV-----QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
D T+++W+ + G+ + T+ + + +V V F P G +L A+G D+
Sbjct: 209 VRDNTIKLWN--VETGQEIRTLPLQLYENTGHNKSVTSVSFSPDGKTL-ASGSYDETIKL 265
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
++V + + GH V + F D TL T DG +KLWNV + IRT GH
Sbjct: 266 WNV-ETGQEIRTLTGHNSNVNSVSFSPDGKTLATGSDDGTIKLWNVETGKEIRTLTGH-- 322
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
N +S G L GS + +++ +G
Sbjct: 323 NSTVTSVSFSPDGKTLATGSSDGTIKLWNGEYG 355
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 17/134 (12%)
Query: 38 NAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTP 97
N + S+ + F P A+G I+++N+++ + + H+
Sbjct: 235 NTGHNKSVTSVSFSPDGKTLASGSYDETIKLWNVET---GQEIRTLTGHN---------- 281
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+ ++S+ + P G+ L +G DG + +++E I H V SV +S L
Sbjct: 282 SNVNSVSFSP--DGKTLATGSDDGTIKLWNVETGKEIRTLTGH-NSTVTSVSFSPDGKTL 338
Query: 158 GASGSDDGTMQMWD 171
A+GS DGT+++W+
Sbjct: 339 -ATGSSDGTIKLWN 351
>gi|209523154|ref|ZP_03271710.1| WD-40 repeat protein [Arthrospira maxima CS-328]
gi|209496305|gb|EDZ96604.1| WD-40 repeat protein [Arthrospira maxima CS-328]
Length = 829
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 26/265 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G +R++++ + + + H+ D+ + S+ + P
Sbjct: 468 VSFSPDGQTLASGSSDNTVRLWDVAT---GRELRQLTGHT---DW-------VWSVSFSP 514
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG D V +D+ + + H V SV +S L ASGS D T+
Sbjct: 515 --DGQTLASGSGDNTVRLWDVATGRELRQLTGHTSW-VESVSFSPDGQTL-ASGSHDNTV 570
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD G+ + Q + V V F P G +L A+G D +DV P+
Sbjct: 571 RLWDVAT--GRELR--QLTGHTDWVLSVRFSPDGQTL-ASGSYDNTVRLWDV-ATGRPLR 624
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH V +RF D TL + D ++LW+V R +R GH N+ N V S
Sbjct: 625 QLTGHTDWVLSVRFSPDGQTLASGSDDNTVRLWDVPTGRELRQLTGHTNSVNSVRFSP-- 682
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPV 311
G L GS N V ++DV G +
Sbjct: 683 DGQTLASGSWDNTVRLWDVATGREL 707
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 135/310 (43%), Gaps = 37/310 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G +R++++ + + + H+ D+ + S+++ P
Sbjct: 552 VSFSPDGQTLASGSHDNTVRLWDVAT---GRELRQLTGHT---DWVL-------SVRFSP 598
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG YD V +D+ P+ + H V SV +S L ASGSDD T+
Sbjct: 599 --DGQTLASGSYDNTVRLWDVATGRPLRQLTGHTDW-VLSVRFSPDGQTL-ASGSDDNTV 654
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD G+ + Q + ++V V F P G +L A+G D +DV + +
Sbjct: 655 RLWD--VPTGRELR--QLTGHTNSVNSVRFSPDGQTL-ASGSWDNTVRLWDVATGRE-LR 708
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
G V + F D TL + D ++LW+V R +R GH ++ N V S
Sbjct: 709 QLTGDTNWVRSVSFSPDGQTLASGSYDNIVRLWDVATGRELRQLTGHTSSVNSVSFSS-- 766
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVA 346
G L GS N V ++DV G + +T G S+V D TL +
Sbjct: 767 DGQTLASGSWDNTVRLWDVATG-----RELRQLT------GHTSTVYSVSFSPDGQTLAS 815
Query: 347 GGSDGLLHVF 356
G DG++ ++
Sbjct: 816 GSDDGVVRLW 825
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 89/225 (39%), Gaps = 33/225 (14%)
Query: 142 GRRVWSVDYSKGDPVLGASGSDDGTM---------QMWDPRCDGGKCVSTVQPSASRSAV 192
G VW +D P LG + S DG + +WD G+ + Q + V
Sbjct: 288 GEAVWEIDC----PALGGAVSADGQLLALRSNKDIYLWD--LSTGQLLR--QLTGHTRDV 339
Query: 193 CCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAG 251
V F P G +L A+G D +DV + + GH V + F D TL +
Sbjct: 340 RSVSFSPDGQTL-ASGSGDNTVRLWDVATGRE-LRQLTGHTDWVWSVSFSPDGQTLASGS 397
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
D ++LW+V R +R GH + V LS G L GS V ++DV G
Sbjct: 398 GDNTVRLWDVATGRELRQLTGHTESVWSVRLSP--DGQTLASGSWDKTVRLWDVATG--- 452
Query: 312 WVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ +T G S+V D TL +G SD + ++
Sbjct: 453 --RELRQLT------GHTSTVWSVSFSPDGQTLASGSSDNTVRLW 489
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 104/262 (39%), Gaps = 64/262 (24%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P A+G +R++++ + P+ + H+ D+ +
Sbjct: 588 TDWVLSVRFSPDGQTLASGSYDNTVRLWDVAT---GRPLRQLTGHT---DWVL------- 634
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+++ P G+ L SG D V +D+ + + H V SV +S L ASG
Sbjct: 635 SVRFSP--DGQTLASGSDDNTVRLWDVPTGRELRQLTGHT-NSVNSVRFSPDGQTL-ASG 690
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV-- 219
S D T+++WD G+ + Q + + V V F P G +L A+G D +DV
Sbjct: 691 SWDNTVRLWDVAT--GRELR--QLTGDTNWVRSVSFSPDGQTL-ASGSYDNIVRLWDVAT 745
Query: 220 ----RKMV------------------------DPVLVFD-----------GHRKTVTYIR 240
R++ + V ++D GH TV +
Sbjct: 746 GRELRQLTGHTSSVNSVSFSSDGQTLASGSWDNTVRLWDVATGRELRQLTGHTSTVYSVS 805
Query: 241 FL-DVDTLVTAGTDGCLKLWNV 261
F D TL + DG ++LW V
Sbjct: 806 FSPDGQTLASGSDDGVVRLWRV 827
>gi|443324394|ref|ZP_21053161.1| WD40 repeat-containing protein, partial [Xenococcus sp. PCC 7305]
gi|442795976|gb|ELS05308.1| WD40 repeat-containing protein, partial [Xenococcus sp. PCC 7305]
Length = 647
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D + +D+ ++ + H + S+ +S L SGS D T+++W
Sbjct: 7 GKHLVSGSSDQTIKLWDVNQQSLVHTFQAHEDH-ILSIAFSPDGKHL-VSGSSDQTIKLW 64
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + V T + V V F P G LV+ G +D+ +DV + + F+
Sbjct: 65 D--VNQQSLVHTFNDH--ENYVLSVGFSPDGKYLVS-GSSDQTIKLWDVNQQ-SLLHTFN 118
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH+ +V + F D LV+ D +KLW+VN ++ T+KGH N V S G
Sbjct: 119 GHKYSVLSVGFSPDGKYLVSGSDDQTIKLWDVNQKSLLHTFKGHENYVRSVAFS--PDGK 176
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDF----EPVTAA 322
L GS+ + ++DV+ + +H F EP+ +A
Sbjct: 177 YLISGSDDKTIKLWDVK--QQSLLHTFQAHEEPIRSA 211
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 145/339 (42%), Gaps = 41/339 (12%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD N ++ V + A D I I F P +G + I+++++ + H
Sbjct: 22 WDVNQQSLVHTFQ----AHEDHILSIAFSPDGKHLVSGSSDQTIKLWDVNQQSLVH---T 74
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
DH Y+ S+ + P G+ L SG D + +D+ ++ + + H
Sbjct: 75 FNDHEN----YVL------SVGFSP--DGKYLVSGSSDQTIKLWDVNQQSLLHTFNGHK- 121
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V SV +S L SGSDD T+++WD + + T + + V V F P G
Sbjct: 122 YSVLSVGFSPDGKYL-VSGSDDQTIKLWD--VNQKSLLHTFK--GHENYVRSVAFSPDGK 176
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
L++ G DK +DV++ + F H + + F D V+ G+D +KLW+V
Sbjct: 177 YLIS-GSDDKTIKLWDVKQQ-SLLHTFQAHEEPIRSAVFSPDGKYFVSGGSDKTIKLWDV 234
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA 321
N ++ ++K H + + + ++ G L S + ++DV+ + +H F
Sbjct: 235 NQQSLVHSFKAHED--HILSIAFSPDGKNLVSSSSDQTIKLWDVK--QRSLLHTF----- 285
Query: 322 AGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
V SV + G+ L +G SD + +++G K
Sbjct: 286 -NGHEDHVLSVAFSPDGK---YLASGSSDQTVKLWLGAK 320
>gi|30688988|ref|NP_851064.1| Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis
thaliana]
gi|73620972|sp|Q8H0T9.3|KTNB1_ARATH RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog
gi|25083345|gb|AAN72064.1| putative protein [Arabidopsis thaliana]
gi|332005783|gb|AED93166.1| Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis
thaliana]
Length = 837
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H + SV + + VL A+G+ GT+++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG-IDSVTFDASE-VLVAAGAASGTIKL 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + RS V+FHPFG A+G D +D+RK + +
Sbjct: 86 WD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHTY 139
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D +V+ G D +K+W++ +++ +K H L H
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG--QIQSLDFHPHE 197
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V +D + FE + + G E
Sbjct: 198 FLLATGSADRTVKFWD--------LETFELIGSGGPE 226
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 15/171 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A +AV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDASEV 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H + +G V R D +V+GG D ++ V+
Sbjct: 131 R--KKGCIHTY---------KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P FA+G + ++I++I+ H H++ + TP
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIH---TYKGHTRGVNVLRFTP---------- 153
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D +V +DL + E H G ++ S+D+ + +L A+GS D T+
Sbjct: 154 --DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG-QIQSLDFHPHEFLL-ATGSADRTV 209
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+ WD + + + + P + V C+ F+P G +++ K +++ +P+
Sbjct: 210 KFWD--LETFELIGSGGPET--AGVRCLSFNPDGKTVLCGLQESLKIFSW------EPIR 259
Query: 228 VFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRV 266
DG V + R D++ L + C+ +W V+ SR
Sbjct: 260 CHDG--VDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSRT 301
>gi|297812493|ref|XP_002874130.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319967|gb|EFH50389.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
Length = 837
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H + SV + + VL A+G+ GT+++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG-IDSVTFDASE-VLVAAGAASGTIKL 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + RS V+FHPFG A+G D +D+RK + +
Sbjct: 86 WD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHTY 139
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D +V+ G D +K+W++ +++ +K H L H
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG--QIQSLDFHPHE 197
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V +D + FE + + G E
Sbjct: 198 FLLATGSADRTVKFWD--------LETFELIGSGGPE 226
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 15/171 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A +AV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDASEV 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H + +G V R D +V+GG D ++ V+
Sbjct: 131 R--KKGCIHTY---------KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P FA+G + ++I++I+ H H++ + TP
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKG---HTRGVNVLRFTP---------- 153
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D +V +DL + E H G ++ S+D+ + +L A+GS D T+
Sbjct: 154 --DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG-QIQSLDFHPHEFLL-ATGSADRTV 209
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+ WD + + + + P + V C+ F+P G +++ K +++ +P+
Sbjct: 210 KFWD--LETFELIGSGGPET--AGVRCLSFNPDGKTVLCGLQESLKIFSW------EPIR 259
Query: 228 VFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRV 266
DG V + R D++ L + C+ +W V+ SR
Sbjct: 260 CHDG--VDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSRT 301
>gi|75812414|ref|YP_320033.1| WD-40 repeat-containing serine/threonin protein kinase [Anabaena
variabilis ATCC 29413]
gi|75705170|gb|ABA24844.1| serine/threonine protein kinase with WD40 repeats [Anabaena
variabilis ATCC 29413]
Length = 682
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 123/265 (46%), Gaps = 26/265 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+DS+ I P+D + A+G + I+++N+ ++ + ++ H+K +S
Sbjct: 401 TDSVLSIAISPNDKIIASGSSDKTIKLWNLVTM---QQICTLIGHTK----------GIS 447
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + + +L SG YD + ++L K I H + + S+ +S +L ASG
Sbjct: 448 SVTF--SLNRNILASGSYDTTIKLWNLTTKEEICTLIGHA-QGISSIAFSPDGNIL-ASG 503
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ G+ ++T+ V V F P G +LV+ GC D +D+
Sbjct: 504 SYDTTIKLWN--LTTGEQINTL--IGHSHFVLSVAFSPDGKTLVS-GCYDATIKLWDLVT 558
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
GH +VT + D +T + D + LW++ ++ I + H NN N V
Sbjct: 559 G-KQTRTITGHGDSVTSVIISPDGETFASGSFDETVILWDLVTAKEIHRFYKHYNNVNSV 617
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV 305
S + ++ GS+ N + ++ +
Sbjct: 618 AFST--NSKIIASGSDDNTIQIFHL 640
>gi|392867449|gb|EAS29320.2| U5 snRNP complex subunit [Coccidioides immitis RS]
Length = 362
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 150/374 (40%), Gaps = 67/374 (17%)
Query: 17 ERARCEWDF--NLRTTVSSSSSPNAAVSDSIG--------------------VIEFDPSD 54
+R R + D N VSSS+S N A+ +I FDP+
Sbjct: 22 KRQRSDADLGNNNALAVSSSTSQNGALMKAIPRTSGLEAPIMELTGHTGEVFATRFDPTG 81
Query: 55 SVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVL 114
A+GG+ R I ++ + + +Y + T K + L R++
Sbjct: 82 QHIASGGMDRSILLWRT--------------YGQCENYGVMTGHKGAVLDLHWSRDSRII 127
Query: 115 GSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSKGDPVLGASGSDDGTMQMWDPR 173
S D + +DLE I R G V + +D SK L SGSDDG + +WDPR
Sbjct: 128 FSASADMTLASWDLESGERI--RRHVGHEEVINCLDLSKRGQELLISGSDDGCIGIWDPR 185
Query: 174 -CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
D + T P + V G+ + + G D + +D+RK V GH
Sbjct: 186 KKDAIDFLETEMP------ITAVALAEAGNEIYSGGI-DNDIHVWDIRKR-SIVYSMIGH 237
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHVN--NRNFVGLSVW 285
TVT ++ D +L++ D ++ W++ R I+TY G +N + S
Sbjct: 238 TDTVTSLQISPDSQSLLSNSHDSTVRTWDIRPFAPADRHIKTYDGATTGLEKNLIRASWS 297
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
+G + GS V ++D + + ++ +G V+ V R DE +V
Sbjct: 298 PNGEKIAAGSGDRSVVIWDTKSAKILY--------KLPGHKGVVNDV--RFAPNDEPIIV 347
Query: 346 AGGSDGLLHVFVGK 359
+G SD +F+G+
Sbjct: 348 SGSSDRC--IFLGE 359
>gi|30688991|ref|NP_197734.2| Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis
thaliana]
gi|332005784|gb|AED93167.1| Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis
thaliana]
Length = 836
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H + SV + + VL A+G+ GT+++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG-IDSVTFDASE-VLVAAGAASGTIKL 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + RS V+FHPFG A+G D +D+RK + +
Sbjct: 86 WD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHTY 139
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D +V+ G D +K+W++ +++ +K H L H
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG--QIQSLDFHPHE 197
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V +D + FE + + G E
Sbjct: 198 FLLATGSADRTVKFWD--------LETFELIGSGGPE 226
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 15/171 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A +AV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDASEV 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H + +G V R D +V+GG D ++ V+
Sbjct: 131 R--KKGCIHTY---------KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P FA+G + ++I++I+ H H++ + TP
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIH---TYKGHTRGVNVLRFTP---------- 153
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D +V +DL + E H G ++ S+D+ + +L A+GS D T+
Sbjct: 154 --DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG-QIQSLDFHPHEFLL-ATGSADRTV 209
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+ WD + + + + P + V C+ F+P G +++ K +++ +P+
Sbjct: 210 KFWD--LETFELIGSGGPET--AGVRCLSFNPDGKTVLCGLQESLKIFSW------EPIR 259
Query: 228 VFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRV 266
DG V + R D++ L + C+ +W V+ SR
Sbjct: 260 CHDG--VDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSRT 301
>gi|254416061|ref|ZP_05029817.1| Pentapeptide repeat protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196177236|gb|EDX72244.1| Pentapeptide repeat protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 1185
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ + +GD DG V + + + H G VW V +S L AS SDD T+++W
Sbjct: 580 GKQVATGDVDGNVRLWQVADGKQLLTLKGHQGW-VWGVSFSPDGQTL-ASCSDDQTVRLW 637
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R G+C+ A+ V V F P G +L ++G D +DV K + +
Sbjct: 638 DVR--EGQCLKAFHGHAN--GVWTVAFSPDGQTLASSGL-DPTVRLWDVGKG-QCIKALE 691
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HG 288
G + + + D T+ ++G D ++LW+V + + I+ + GH + V VW G
Sbjct: 692 GQTSRIWSVAWSRDGRTIASSGLDPAIRLWDVGNGQCIKAFHGHTDEVRAV---VWSPDG 748
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
+ GS+ V ++DV G +H F+ T ++ SV W R G
Sbjct: 749 RTIASGSDDKTVRLWDV--GNGRCLHVFQGHTE------WIRSVAWSRDG 790
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 135/351 (38%), Gaps = 65/351 (18%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + + P A+G + +R+++ V + + + +
Sbjct: 736 TDEVRAVVWSPDGRTIASGSDDKTVRLWD-------------VGNGRCLHVFQGHTEWIR 782
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ W G +L S ++ +V +D+ + + H R+WSV +S + + AS
Sbjct: 783 SVAWS--RDGHLLASSGFEPIVRLWDIRNRRCLKILQGHT-ERIWSVAWSPDNRTI-ASA 838
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD R G+C+ + S + V P G +A+G D A +D R
Sbjct: 839 SHDQTLRLWDVR--DGQCLKALH--GYTSGIWSVAVSPNGE-FLASGSDDFLARLWDSRS 893
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + V GH + + + D + T D C++LW+V + GH + +
Sbjct: 894 G-ECLKVLSGHTNGIRGVTWSPDGRKIATGSLDACVRLWDVESGHCLLALPGHTGS---I 949
Query: 281 GLSVWR-HGGLLGCGSETNQVFVYDVRWG----------EPVWVHDFEP---VTAAGS-- 324
VW G L GS V ++D + G VW + P A GS
Sbjct: 950 WTLVWSPDGHTLASGSHDLSVRLWDAQTGVCRSVLQGHTSWVWTVAWSPDSRTLATGSFD 1009
Query: 325 -------------------ERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
G+V SV W D CTL +G D + ++
Sbjct: 1010 FSIRLWDLNSGQSWKLLQGHTGWVCSVAW---SPDSCTLASGSHDQTIRLW 1057
>gi|427732247|ref|YP_007078484.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
gi|427368166|gb|AFY50887.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
Length = 593
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 131/292 (44%), Gaps = 37/292 (12%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD N + V++ S + V+ + F P+ + AT I+++++K+ +
Sbjct: 324 WDLNTQKIVNTLSGHSQTVTS----VAFSPNGDILATASDDHTIKLWHLKT---SREMYT 376
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
++ HS+ + S+ + P G++L SG +D + +D+ I H
Sbjct: 377 LIGHSRA----------VKSVSFHP--DGQILASGSWDKTIKLWDVNTGKEIHTLKGHT- 423
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRC------DGGKCVSTVQPSASRSAVCCVE 196
+V +V +S +L ++G D T+++W + + C +R AV +
Sbjct: 424 LQVSAVGFSPQGQLLASAGFDR-TIRLWRMKAITESEGEIQNCPCDTLLDHTR-AVLAIA 481
Query: 197 FHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTD 253
F P G +++ G D +D+ +++ +L GH +V + F D TL++A D
Sbjct: 482 FSPDGK-ILSTGSDDNTIKLWDIHTGQLIGTLL---GHSWSVVAVTFTADSKTLISASWD 537
Query: 254 GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+KLW ++ + I T GHVN+ + S + L+ GS+ + ++ +
Sbjct: 538 KTIKLWKISTTEEIATLSGHVNSVTAIATS--QVSQLIASGSKDKTIKLWQL 587
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F + V GIA IYN S + P V T ++SL P +
Sbjct: 262 FQSAKEVMQLMGIAN---IYNTSSSNLKSPWQCV---------QTLTTNTINSLAISPDS 309
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+ L SG D ++ +DL + + H + V SV +S +L A+ SDD T+++
Sbjct: 310 N--TLASGGEDKIIRLWDLNTQKIVNTLSGHS-QTVTSVAFSPNGDIL-ATASDDHTIKL 365
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + + + T+ AV V FHP G ++A+G DK +DV + +
Sbjct: 366 WHLKT--SREMYTL--IGHSRAVKSVSFHPDGQ-ILASGSWDKTIKLWDVNTGKE-IHTL 419
Query: 230 DGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN----------RN 278
GH V+ + F L +AG D ++LW + + I +G + N R
Sbjct: 420 KGHTLQVSAVGFSPQGQLLASAGFDRTIRLWRM---KAITESEGEIQNCPCDTLLDHTRA 476
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ ++ G +L GS+ N + ++D+ G+ +
Sbjct: 477 VLAIAFSPDGKILSTGSDDNTIKLWDIHTGQLI 509
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 28 RTTVSSSSSP----NAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAV 83
T+ S+ SP +++I + P + A+GG + IR++++ + + V +
Sbjct: 279 NTSSSNLKSPWQCVQTLTTNTINSLAISPDSNTLASGGEDKIIRLWDLNTQKI---VNTL 335
Query: 84 VDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR 143
HS+ ++S+ + P +G +L + D + + L+ ++ H R
Sbjct: 336 SGHSQT----------VTSVAFSP--NGDILATASDDHTIKLWHLKTSREMYTLIGH-SR 382
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
V SV + +L ASGS D T+++WD + GK + T++ + V V F P G
Sbjct: 383 AVKSVSFHPDGQIL-ASGSWDKTIKLWD--VNTGKEIHTLKGHTLQ--VSAVGFSPQGQL 437
Query: 204 LVAAGCADKKAYAYDVRKMVD--------PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDG 254
L +AG D+ + ++ + + P H + V I F D L T D
Sbjct: 438 LASAGF-DRTIRLWRMKAITESEGEIQNCPCDTLLDHTRAVLAIAFSPDGKILSTGSDDN 496
Query: 255 CLKLWNVNDSRVIRTYKGH 273
+KLW+++ ++I T GH
Sbjct: 497 TIKLWDIHTGQLIGTLLGH 515
>gi|240848887|ref|NP_001155778.1| U5 small nuclear ribonucleoprotein 40 kDa protein [Acyrthosiphon
pisum]
gi|239792239|dbj|BAH72483.1| ACYPI008815 [Acyrthosiphon pisum]
Length = 340
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 135/322 (41%), Gaps = 45/322 (13%)
Query: 26 NLRTTVSSSSSPNAAVSDSIGVI---EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
N+RT SS P A+ G I +F P A+ G RKI I+++ + V+A
Sbjct: 30 NVRT--SSLFMPIMALEGHEGDIFATKFHPEGDYLASSGYDRKIFIWSVYGECENLGVLA 87
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
HS L K T G ++ + D V +D+ K + + H G
Sbjct: 88 --GHSGAV------------LDMKFSTDGTLIYTSSTDMTVSFWDIYKGQRVKKLKGHTG 133
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V S D ++ P + S SDD T+++WDPR GG V+T + +VC F+
Sbjct: 134 F-VNSCDSARRGPQMITSASDDCTIKVWDPRKRGGDAVTTFNNNYQVMSVC---FNDTAD 189
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
++ G D + +D+RK + GH TVT + D L++ D L++W+V
Sbjct: 190 QVITGGL-DNEIKIWDLRKNA-LLHRLPGHTDTVTGLELSPDGCYLLSNAMDNSLRIWDV 247
Query: 262 ND----SRVIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW--- 312
R ++ + GH +N +N + + G + GS V+++D ++
Sbjct: 248 RPYAPADRCLKVFSGHTHNFEKNLLRCAWSPDGSKVSAGSADRYVYIWDANTRRILYKLP 307
Query: 313 ----------VHDFEPVTAAGS 324
H EP+ +GS
Sbjct: 308 GHNGSVNDVDFHPKEPIIMSGS 329
>gi|434386410|ref|YP_007097021.1| WD40 repeat-containing protein [Chamaesiphon minutus PCC 6605]
gi|428017400|gb|AFY93494.1| WD40 repeat-containing protein [Chamaesiphon minutus PCC 6605]
Length = 1237
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 21/272 (7%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYICTPAKLSS 102
SI + P + A+GG I +++ + H + +++ H + P +L+S
Sbjct: 590 SINSLALSPDGNYLASGGFNGDIYLWDTHT----HQLQSILKGHISLVHSLTYAPVRLAS 645
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+L SG +DG V +DL+ + +H + V+SV +S +L ASGS
Sbjct: 646 ----SAEDRHILASGSFDGTVRIWDLDTGECLKTLTDHT-QAVYSVSFSPDGKIL-ASGS 699
Query: 163 DDGTMQMWDPRCDGGKCVSTVQ--PSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
DDG++++WD + G+C++++Q V C+ F G + +A+GC+ + + ++
Sbjct: 700 DDGSIKIWD--VNSGECLTSLQYEDGIEPQDVKCIAFCVDGRT-IASGCSKGTIHLWQIQ 756
Query: 221 --KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + GH+ V + F D L + D +K+W ++ + T GH N
Sbjct: 757 NGRHGKYWKMLAGHQGWVWSVVFSPDGKFLASGSDDTTVKIWEIDTGECLGTLVGHKNEV 816
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V R G L + + ++D++ E
Sbjct: 817 KSVAFD--RDGRRLISSGKDRTIKIWDIQTQE 846
Score = 47.0 bits (110), Expect = 0.015, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 65/276 (23%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + + + + AV + F P + A+G I+I+++
Sbjct: 665 WDLDTGECLKTLTDHTQAVYS----VSFSPDGKILASGSDDGSIKIWDV----------- 709
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPG------------TSGRVLGSGDYDGVVMEYDLEK 130
+S C L+SL+++ G GR + SG G + + ++
Sbjct: 710 ---NSGEC---------LTSLQYEDGIEPQDVKCIAFCVDGRTIASGCSKGTIHLWQIQN 757
Query: 131 KVPIFERDEHG-------GRR--VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVS 181
HG G + VWSV +S L ASGSDD T+++W+ D G+C+
Sbjct: 758 -------GRHGKYWKMLAGHQGWVWSVVFSPDGKFL-ASGSDDTTVKIWE--IDTGECLG 807
Query: 182 TVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR-KMVDPVLVFDGHRKTVTYIR 240
T+ ++ V V F G L+++G D+ +D++ + + L+ GH + I
Sbjct: 808 TL--VGHKNEVKSVAFDRDGRRLISSG-KDRTIKIWDIQTQECEQTLI--GHENGLWSIA 862
Query: 241 F-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
L+ + G D ++ W++ + ++ +G+ N
Sbjct: 863 VDLNRQLFASGGQDRMIRFWSLETGQCLKVLQGYSN 898
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKG-DPVLGASGSDDG 165
+ GR+L SG D + + + + I H W + + G P + S S D
Sbjct: 1006 SDGRILASGSTDRTIRLWSTQTGECLQILTGHTH-----WVMSLAFGFQPDILVSASGDR 1060
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+ W+ G+C+ T Q +C + F P G ++A+G +D+ + + +
Sbjct: 1061 TINFWNIHT--GECLRTWQVG---RGICTIAFSPSGD-ILASGSSDRTIGLWSI-ATGEC 1113
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
V GH V + F L+ +G+ D ++LW+++ ++ +GH + V +
Sbjct: 1114 FQVLRGHTDIVMSVAFSPDGRLLASGSFDRTVRLWDLHTGECLQVLEGHESGVFSVAF-I 1172
Query: 285 WRHG---GLLGCGSETNQVFVYDVRWGEPV 311
+HG LL S + ++D+ GE V
Sbjct: 1173 PQHGTARKLLASSSADATIRIWDIATGECV 1202
>gi|298251074|ref|ZP_06974878.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
gi|297549078|gb|EFH82945.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
Length = 1237
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 132/333 (39%), Gaps = 82/333 (24%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS-----VLVDHP--------------VVAVVDHSK 88
+ F P + A+GG R +R++ + + L H + + +
Sbjct: 656 VAFRPDGARLASGGEDRLVRLWEVSTGQCLKTLQGHTDWVRSVAFSPDGARLASSSNDGT 715
Query: 89 VCDYYICTPAKLSSLKWKPGTSGRV-----------LGSGDYDGVVMEYDLEKKVPIFER 137
V + + T L++ + G +GRV L S DG V +++ + +
Sbjct: 716 VKLWEVSTGQCLTTFQ---GHTGRVWSVAFSPDGTRLASSSDDGTVRLWEVSTEQCLATL 772
Query: 138 DEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQ------------P 185
H GR VWSV +S LG SGS+D +++W+ + GKC++T+Q P
Sbjct: 773 QGHTGR-VWSVAFSADSATLG-SGSNDQMVKLWE--VNTGKCLTTLQGHTDWVRSVAFSP 828
Query: 186 SASRSA----------------------------VCCVEFHPFGSSLVAAGCADKKAYAY 217
+R A V V F P G+ L A+G D +
Sbjct: 829 DGARLASGSHDRTVRVWEVSTGQCLTTLQGHTGQVWAVAFSPNGTRL-ASGSYDGTVRLW 887
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+V + GH T + F D T G DG +KLW V+ + ++T +GH +
Sbjct: 888 EV-STGQCLATLQGHAIWSTSVSFSPDRSRFATGGHDGTVKLWEVSTGKCLKTLRGHTSW 946
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
VG S+ G LL GS V V++V G+
Sbjct: 947 VGSVGFSL--DGTLLASGSHDRTVRVWEVSTGK 977
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P + A+G R +R++ + + + + H+ ++
Sbjct: 818 TDWVRSVAFSPDGARLASGSHDRTVRVWEVST---GQCLTTLQGHT----------GQVW 864
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
++ + P +G L SG YDG V +++ + H +WS S D A+
Sbjct: 865 AVAFSP--NGTRLASGSYDGTVRLWEVSTGQCLATLQGHA---IWSTSVSFSPDRSRFAT 919
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
G DGT+++W+ GKC+ T++ S V V F G +L+A+G D+ ++V
Sbjct: 920 GGHDGTVKLWE--VSTGKCLKTLR--GHTSWVGSVGFSLDG-TLLASGSHDRTVRVWEV- 973
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ GH V + F D L + D ++ W V+ + ++T +GH +
Sbjct: 974 STGKCLKTLQGHTDWVRSVTFSPDGSRLASGSYDTTVRTWEVSTGKCLQTLRGHTSWVGS 1033
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
VG S+ G LL GS V V++V G+
Sbjct: 1034 VGFSL--DGTLLASGSHDRTVRVWEVSTGK 1061
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 121/292 (41%), Gaps = 38/292 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS------------------VLVDHPVVAVVDHSKV 89
+ F P S FATGG ++++ + + +D ++A H +
Sbjct: 908 VSFSPDRSRFATGGHDGTVKLWEVSTGKCLKTLRGHTSWVGSVGFSLDGTLLASGSHDRT 967
Query: 90 CDYYICTPAK-LSSLK----WKPGTS----GRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
+ + K L +L+ W + G L SG YD V +++ + H
Sbjct: 968 VRVWEVSTGKCLKTLQGHTDWVRSVTFSPDGSRLASGSYDTTVRTWEVSTGKCLQTLRGH 1027
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
V SV +S D L ASGS D T+++W+ GKC+ T+Q V F P
Sbjct: 1028 TSW-VGSVGFSL-DGTLLASGSHDRTVRVWE--VSTGKCLKTLQ--GHTDLVRSGAFSPD 1081
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
G+ L A+G D+ +DV + + GH V + F D TL + G DG +++W
Sbjct: 1082 GTVL-ASGSDDRTVRVWDV-STGQCLKILQGHTGWVESVIFSPDGATLASGGHDGTVRVW 1139
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V+ ++T H V S G L+ SE + ++VR GE V
Sbjct: 1140 EVSSGACLKTLHRHPGRIWAVVFSP--DGSLVLSASEDRTILCWNVRTGECV 1189
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 19/171 (11%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS S+DGT+++W+ G+C++T Q R V V F P G+ L A+ D ++
Sbjct: 708 ASSSNDGTVKLWE--VSTGQCLTTFQGHTGR--VWSVAFSPDGTRL-ASSSDDGTVRLWE 762
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
V + GH V + F D TL + D +KLW VN + + T +GH +
Sbjct: 763 V-STEQCLATLQGHTGRVWSVAFSADSATLGSGSNDQMVKLWEVNTGKCLTTLQGHTDWV 821
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE----------PVWVHDFEP 318
V S G L GS V V++V G+ VW F P
Sbjct: 822 RSVAFSP--DGARLASGSHDRTVRVWEVSTGQCLTTLQGHTGQVWAVAFSP 870
>gi|427716008|ref|YP_007064002.1| WD-40 repeat-containing protein [Calothrix sp. PCC 7507]
gi|427348444|gb|AFY31168.1| WD-40 repeat-containing protein [Calothrix sp. PCC 7507]
Length = 1235
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 28/213 (13%)
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
RR+WSV ++ +L ++G + ++++W + GKC+ T+Q R V V F G
Sbjct: 868 RRIWSVAFNPQGNILASAGRNQ-SIKLW--QIATGKCLKTLQGYTGR--VWTVAFSSDGE 922
Query: 203 SLVAAGCADKKAYAYDV--RKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLW 259
SL A D+ +DV RK + + GH V+ + F++ TLV+ D +++W
Sbjct: 923 SL--ASGTDQTVQLWDVINRKCLKNL---SGHTCEVSTLAFIEQKQTLVSGSYDRTIRVW 977
Query: 260 NVNDSRVIRTYKGHVNNRNFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
++N + +RT +GH + F+ L+ G ++ GS N + ++DV+ G+ + D
Sbjct: 978 DINTGQCLRTLRGH---KGFIFSLTCNPDGQIIVSGSADNTIKLWDVKTGQCLNTLD--- 1031
Query: 319 VTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
+ +V SV W GE L + SDG
Sbjct: 1032 -----GHQDWVFSVAWSPNGE---FLASSCSDG 1056
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 66/288 (22%), Positives = 117/288 (40%), Gaps = 30/288 (10%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD R + + S VS + F +G R IR+++I + +
Sbjct: 935 WDVINRKCLKNLSGHTCEVS----TLAFIEQKQTLVSGSYDRTIRVWDINT---GQCLRT 987
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H C P G+++ SG D + +D++ + D H
Sbjct: 988 LRGHKGFIFSLTCNP------------DGQIIVSGSADNTIKLWDVKTGQCLNTLDGHQD 1035
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V+SV +S L +S SD G +++WD + C+ T++ + + F P S
Sbjct: 1036 W-VFSVAWSPNGEFLASSCSD-GNIKLWDTKT--WTCLKTLE--GHQGWAFSIAFSP-DS 1088
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
++ +G AD ++V K F H K VT +RF D D + + D +K+W
Sbjct: 1089 QILVSGGADLTVKLWNV-KTGHCQQTFSRHTKMVTGVRFSPDGDLVASCSYDRTIKIWQR 1147
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
R ++T GH +G++ H G+L + + ++DV G+
Sbjct: 1148 KTGRCLKTLSGH--KHWILGIAFHPHRGMLASACQDQTIRLWDVDTGK 1193
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 26/265 (9%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDP 155
A + ++ + P G++L SGD +G + ++ E + + H G VW + +S D
Sbjct: 613 ANILTIAFSP--DGKLLASGDTNGDICLWNTEDFQMRNVASLKGHIGW-VWEMKFS-ADG 668
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
S S+DGT+++W+ GKC+ ++ A + + P G ++A+G AD
Sbjct: 669 KTVVSCSEDGTIRIWN--ISTGKCLQVIK--AHTTGCGTISLSPNGQ-ILASGGADATIK 723
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+ V + +F GH + + + F D + L + D +KLW+V + + T +GH
Sbjct: 724 LWHVSNG-KCLKIFKGHTQLLRRVNFSPDGEILASGSCDRTIKLWDVASGKCLYTLQGHT 782
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG-----------EPVWVHDFEPVTAAG 323
+ + L+ G L GS V +D+ G E V F P
Sbjct: 783 S--EVLALAFSPDGLTLASGSADKTVKFWDINTGLCWRTLQGKQLESVVTVAFSPDGKTL 840
Query: 324 SERGFVSSVCWRRVGEDECTLVAGG 348
+ G S++ V +C GG
Sbjct: 841 AAAGEASAISLWDVETGQCYQTFGG 865
>gi|158340251|ref|YP_001521421.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158310492|gb|ABW32107.1| WD-repeat protein [Acaryochloris marina MBIC11017]
Length = 1268
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 26/245 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIA--RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK 99
+D+I + + P D + A+GG R IR++NI + + + HS
Sbjct: 985 TDAIRSVAYCPHDQIIASGGGTGDRTIRLWNISN---GQCIKILKGHSN----------G 1031
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ SL + P G+ L S D +D+ E + G VWSV +S +L A
Sbjct: 1032 IWSLAFHP--KGKFLASSGLDQSAKLWDIHSG-ECLETFQGHGHWVWSVSFSPNAEIL-A 1087
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD G+C++T++ +S + V F P +A+G D+ A +D
Sbjct: 1088 SGSFDRTVKLWD--IQEGRCLNTLKGHSSGVSS--VSFSP-NEHFIASGSVDQTARLWDF 1142
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
K D + +F+GH + + F + L TA D ++ W+V + + +GH N
Sbjct: 1143 -KTNDCICIFEGHSGQIWDVAFSPNGQLLATASLDHTIRCWDVETHKHLAILEGHTNGVT 1201
Query: 279 FVGLS 283
V S
Sbjct: 1202 SVAFS 1206
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 27/263 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F P + A G +IR+ + P++ H+ + SL + P
Sbjct: 643 IAFSPDGKLIAAGDFKGEIRLLRVPD---GQPLLTCSGHTNW----------VKSLAFSP 689
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+ +L S D V +++ + H +W V +S D L AS SDD T+
Sbjct: 690 --TNHLLASAGPDQTVRLWNVRTGECLKLLSGHTNF-IWEVAFSP-DGTLLASCSDDFTV 745
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ + G+ + + + R+A + F P L A G AD+ ++V K +
Sbjct: 746 RLWNSQT--GQFLKSFR---YRAAARSIAFSPDNHEL-ACGYADQTIRIWEV-KSGQCLK 798
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
V GH V I + D LV+A D +++WN+ I+ GH N+ + L
Sbjct: 799 VLAGHAGWVWSIAYSPDGQMLVSACDDPIIRVWNLQSGECIQKLFGHSNSIRSIALC--S 856
Query: 287 HGGLLGCGSETNQVFVYDVRWGE 309
G L GS + ++D+R G+
Sbjct: 857 SGHYLASGSADQLIKIWDIRTGK 879
Score = 45.8 bits (107), Expect = 0.029, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV--QPSASRSAVCCVEFHPFGS 202
VWS+ YS +L S DD +++W+ G+C+ + ++ RS C H
Sbjct: 807 VWSIAYSPDGQML-VSACDDPIIRVWN--LQSGECIQKLFGHSNSIRSIALCSSGH---- 859
Query: 203 SLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLW 259
+A+G AD+ +D+R K + +L GH V + ++ + + DG ++LW
Sbjct: 860 -YLASGSADQLIKIWDIRTGKCLKTLL---GHTNWVWSVAINPTQKIMASSSQDGSIRLW 915
Query: 260 NVNDSRVIRTYKG 272
+ N R +RT G
Sbjct: 916 DYNKGRCLRTLSG 928
>gi|427717913|ref|YP_007065907.1| serine/threonine protein kinase with WD40 repeats [Calothrix sp.
PCC 7507]
gi|427350349|gb|AFY33073.1| serine/threonine protein kinase with WD40 repeats [Calothrix sp.
PCC 7507]
Length = 588
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 125/289 (43%), Gaps = 33/289 (11%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD N + +S + + AV + F P + AT + ++++++ ++ +
Sbjct: 319 WDLNTKKCFASLAGHSQAVKS----VAFSPDGQILATASDDQTVKLWDVNTL---QEIFT 371
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ HS +P G++L SG +D V +D+ I+ + H
Sbjct: 372 LFGHSHAVKSVAFSP------------DGQMLASGSWDKTVKIWDINTGKEIYTLNGHR- 418
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWD-PRCDGGK----CVSTVQPSASRSAVCCVEF 197
+V SV + + D + AS S D T+++W P+ + +ST+ S AV V F
Sbjct: 419 LQVTSVAF-RPDGQMLASASFDRTIRLWHLPKKFKNRPDYSLLSTL--SGHAWAVLTVAF 475
Query: 198 HPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCL 256
P G ++A G D +DV + + GH V + F D TL++ D +
Sbjct: 476 SPDGQ-ILATGSDDNTIKLWDVNTG-EVITTLSGHSWAVVTLAFTADGKTLISGSWDQTI 533
Query: 257 KLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+LW VN I T GHV++ V +S + G L+ GS + ++ +
Sbjct: 534 RLWQVNTGAEIATLSGHVDSVFAVAVS--QVGHLIASGSRDKSIKLWQL 580
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 116/283 (40%), Gaps = 31/283 (10%)
Query: 36 SPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYIC 95
S N+ S I + P + +G + IR++++ + ++ HS+
Sbjct: 286 SRNSGFSAEINSLAISPDGNTLVSGDDDKIIRLWDLNT---KKCFASLAGHSQAVKSVAF 342
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
+P G++L + D V +D+ IF H V SV +S
Sbjct: 343 SP------------DGQILATASDDQTVKLWDVNTLQEIFTLFGHS-HAVKSVAFSPDGQ 389
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
+L ASGS D T+++WD + GK + T+ + R V V F P G ++A+ D+
Sbjct: 390 ML-ASGSWDKTVKIWD--INTGKEIYTL--NGHRLQVTSVAFRPDGQ-MLASASFDRTIR 443
Query: 216 AYDVRKMV----DPVLV--FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIR 268
+ + K D L+ GH V + F D L T D +KLW+VN VI
Sbjct: 444 LWHLPKKFKNRPDYSLLSTLSGHAWAVLTVAFSPDGQILATGSDDNTIKLWDVNTGEVIT 503
Query: 269 TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
T GH + V L+ G L GS + ++ V G +
Sbjct: 504 TLSGH--SWAVVTLAFTADGKTLISGSWDQTIRLWQVNTGAEI 544
>gi|380015944|ref|XP_003691954.1| PREDICTED: LOW QUALITY PROTEIN: katanin p80 WD40-containing subunit
B1-like [Apis florea]
Length = 790
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRVL +G D V + + K+ I H + V + + + ++ A GS G +++
Sbjct: 30 SGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHT-TPIECVRFGQTEDLVCA-GSQTGALKI 87
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K T+ + ++ + C++FHP+G L+A+G D +D+R+ + +
Sbjct: 88 WD--LEHAKLARTL--TGHKAGIRCMDFHPYGE-LLASGSLDTAIKLWDIRRK-GCIFTY 141
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V ++F D + +AG +G +KLW++ R +R + H V H
Sbjct: 142 KGHNRMVNSLKFSPDGQWIASAGEEGMVKLWDLRAGRQLREFSEHRGPATTVEFHP--HE 199
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V +D+
Sbjct: 200 FLLASGSADKTVHFWDL 216
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 84 VDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR 143
++H+K+ A + + + P G +L SG D + +D+ +K IF H R
Sbjct: 90 LEHAKLARTLTGHKAGIRCMDFHP--YGELLASGSLDTAIKLWDIRRKGCIFTYKGHN-R 146
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
V S+ +S D AS ++G +++WD R G+ + S R VEFHP
Sbjct: 147 MVNSLKFSP-DGQWIASAGEEGMVKLWDLR--AGRQLREF--SEHRGPATTVEFHPH-EF 200
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND 263
L+A+G ADK + +D+ H + + F + AG LK++
Sbjct: 201 LLASGSADKTVHFWDLESFQLVSSTDQSHSSAIRCLYFSQGGECLFAGCHDVLKVYGWEP 260
Query: 264 SRVI 267
R +
Sbjct: 261 GRTL 264
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 20/196 (10%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+G DD + +W C+ ++ S + + CV F LV AG +D+
Sbjct: 36 TGGDDKKVNLW--AVGKQNCIMSL--SGHTTPIECVRFGQ-TEDLVCAGSQTGALKIWDL 90
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ GH+ + + F L+ +G+ D +KLW++ I TYKGH NR
Sbjct: 91 -EHAKLARTLTGHKAGIRCMDFHPYGELLASGSLDTAIKLWDIRRKGCIFTYKGH--NRM 147
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
L G + E V ++D+R G + +F RG ++V +
Sbjct: 148 VNSLKFSPDGQWIASAGEEGMVKLWDLRAGR--QLREF------SEHRGPATTVEFH--- 196
Query: 339 EDECTLVAGGSDGLLH 354
E L +G +D +H
Sbjct: 197 PHEFLLASGSADKTVH 212
>gi|298251615|ref|ZP_06975418.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
44963]
gi|297546207|gb|EFH80075.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
44963]
Length = 1223
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 24/258 (9%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR-VWSVDYSKGDPVLG 158
L + W P G + SG DG+VM ++++ P R G R V+ V++S L
Sbjct: 891 LYDIAWSP--DGTRIASGSSDGLVMIWEVDGLTP--PRLLQGHRHLVFGVEWSPDGRRL- 945
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASG D +++WD + + P + ++ + + P G L A G + ++
Sbjct: 946 ASGGWDNAIRVWDTTTGESQQIMR-DPDDAYTSFYGIAWSPDGQHL-ACGTYRPEVQMWE 1003
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V + D L +AG DG + LWN +D R +R +GH++ N
Sbjct: 1004 VSTGTRQWMTRQQPASARRVAWSPDGTRLASAGDDGLISLWNPSDGRWLRQLRGHLSKVN 1063
Query: 279 FVGLSVWRHGGLLGCGS---ETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
+ S R G L G E+ +VFV+++ GE V V G + ++ W
Sbjct: 1064 DIAWS--RDGKWLASGGGSRESGEVFVWEIHSGERVRV--------LPRHAGIIYALAW- 1112
Query: 336 RVGEDECTLVAGGSDGLL 353
G+ LV+G SDG+L
Sbjct: 1113 --GQTGAILVSGSSDGML 1128
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 36/311 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P S A+ I+++++ S V ++ D ++ ++ W P
Sbjct: 768 LAFSPDGSRLASASWDHTIKLWDVASGDVIQTLMGHTD-------------RVQTVAWSP 814
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L S +D + +D+E++ H V+S+ + L SGS DGTM
Sbjct: 815 --DGQTLASAAFDHTIWLWDMEQRTCRMVLQGHTDL-VFSLAFMPNSRRL-LSGSVDGTM 870
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
Q+WD + G+ +Q A ++ + + P G+ +A+G +D ++V + P L
Sbjct: 871 QVWD--TENGQSEQILQSYA--ISLYDIAWSPDGTR-IASGSSDGLVMIWEVDGLTPPRL 925
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN-RNFVGLSVW 285
+ GHR V + + D L + G D +++W+ + + + +F G++
Sbjct: 926 L-QGHRHLVFGVEWSPDGRRLASGGWDNAIRVWDTTTGESQQIMRDPDDAYTSFYGIAWS 984
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
G L CG+ +V +++V G W+ +P +A V W D L
Sbjct: 985 PDGQHLACGTYRPEVQMWEVSTGTRQWMTRQQPASA--------RRVAW---SPDGTRLA 1033
Query: 346 AGGSDGLLHVF 356
+ G DGL+ ++
Sbjct: 1034 SAGDDGLISLW 1044
Score = 41.6 bits (96), Expect = 0.56, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 101/259 (38%), Gaps = 25/259 (9%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ SL + P G L SG YDG+V + +E ++ + + +S D L A
Sbjct: 638 VRSLSFSP--DGHFLASGSYDGMVNVWGVEHGALLWLGSHTAN--ISGLAFSP-DGSLLA 692
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYD 218
SG D T+++WD R G + P A V + + P G L + G + + +
Sbjct: 693 SGGIDATVRLWD-RKTGALLETLPHPHA----VFTLAWSPDGHLLASFGFDGQIRLWKRR 747
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ V GH + F D L +A D +KLW+V VI+T GH +
Sbjct: 748 QSETTTCVACLSGHTNCGMGLAFSPDGSRLASASWDHTIKLWDVASGDVIQTLMGHTDRV 807
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
V W G +T +D +W+ D E T +G V
Sbjct: 808 QTVA---WSPDG------QTLASAAFD----HTIWLWDMEQRTCRMVLQGHTDLVFSLAF 854
Query: 338 GEDECTLVAGGSDGLLHVF 356
+ L++G DG + V+
Sbjct: 855 MPNSRRLLSGSVDGTMQVW 873
Score = 40.8 bits (94), Expect = 0.94, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
+I + F P S+ A+GGI +R+++ K+ ++ + H P + +L
Sbjct: 678 NISGLAFSPDGSLLASGGIDATVRLWDRKT----GALLETLPH----------PHAVFTL 723
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKK-----VPIFERDEHGGRRV-WSVDYSKGDPVL 157
W P G +L S +DG + + + V + G + +S D S+
Sbjct: 724 AWSP--DGHLLASFGFDGQIRLWKRRQSETTTCVACLSGHTNCGMGLAFSPDGSR----- 776
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
AS S D T+++WD G + T+ R V V + P G +L +A D + +
Sbjct: 777 LASASWDHTIKLWD--VASGDVIQTLMGHTDR--VQTVAWSPDGQTLASAA-FDHTIWLW 831
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSR 265
D+ + +V GH V + F+ + L++ DG +++W+ + +
Sbjct: 832 DMEQRT-CRMVLQGHTDLVFSLAFMPNSRRLLSGSVDGTMQVWDTENGQ 879
>gi|282901415|ref|ZP_06309340.1| WD-40 repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281193694|gb|EFA68666.1| WD-40 repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 1341
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D + + F P ATG R++N + L+ + ++++S
Sbjct: 1048 DWVTSVSFSPDGQNIATGSRDNTARLWNWEGRLIQE--------------FKGHQSRVTS 1093
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGAS 160
+ + P G+ +G+G D ++L+ + E G W SV +S +L A+
Sbjct: 1094 VNFSP--DGQTIGTGSADKTARLWNLQGDI----LGEFQGHEDWVTSVSFSPNGQIL-AT 1146
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GS D ++W + D + V V F P G +L A G ADK A ++++
Sbjct: 1147 GSRDKIARLWSLQGD-----LLGEFPGHEDWVTSVSFSPNGQTL-ATGSADKIARLWNLQ 1200
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
D + F GH VT + F D TLVT D +LWN+N +IR +KGH +
Sbjct: 1201 G--DLLGKFPGHEGGVTSVSFSPDGQTLVTGSVDKIARLWNLN-GYLIREFKGH--DSGI 1255
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVR 306
+S G L S V ++D++
Sbjct: 1256 TNVSFSPDGQTLATASVDKTVRLWDLK 1282
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++S+ + P G+ +G+G +D + ++L + R GG V S+ +S +G
Sbjct: 763 ITSVCFSP--DGQSIGTGSWDKTIRLWNLRGENIQQFRGHEGG--VTSICFSPDGQSIG- 817
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+GS+DGT ++W+ + GK + Q + V F P G S + G D A +++
Sbjct: 818 TGSEDGTARLWNLQ---GKNIQ--QFRGHEGGITSVCFSPDGQS-IGTGSEDGTARLWNL 871
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ + F GH VT I F D ++ T DG +LWN+ I+ + GH
Sbjct: 872 QG--KNIQQFRGHEGGVTSICFSPDGQSIGTGSEDGTARLWNLQGEN-IQQFHGH 923
>gi|255560798|ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus communis]
gi|223539311|gb|EEF40902.1| katanin P80 subunit, putative [Ricinus communis]
Length = 936
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 26/201 (12%)
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
VL G+ G +++WD + K V T+ + RS +EFHPFG A+G AD
Sbjct: 82 VLVLGGASTGVIKLWD--LEEAKMVRTL--TGHRSNCTAIEFHPFGE-FFASGSADTNLK 136
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK--- 271
+D+RK + + GH + ++ IRF D +V+ G D +K+W++ +++ +K
Sbjct: 137 LWDIRKK-GTLHTYKGHTRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHDFKFHE 195
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
GH+ + +F L LL GS V +D + FE + +A E V +
Sbjct: 196 GHIRSLDFHPLEF-----LLATGSADRTVKFWD--------LETFELIGSARPEATGVRA 242
Query: 332 VCWRRVGEDECTLVAGGSDGL 352
+ + G TL G D L
Sbjct: 243 ISFHPDGR---TLFCGLDDSL 260
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
IEF P FA+G +++++I+ H Y +S++++ P
Sbjct: 117 IEFHPFGEFFASGSADTNLKLWDIRKKGTLH-------------TYKGHTRGISTIRFTP 163
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D VV +DL + + H G + S+D+ + +L A+GS D T+
Sbjct: 164 --DGRWVVSGGLDNVVKVWDLTAGKLLHDFKFHEG-HIRSLDFHPLEFLL-ATGSADRTV 219
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+ WD + + + + +P A + V + FHP G +L K Y+++
Sbjct: 220 KFWD--LETFELIGSARPEA--TGVRAISFHPDGRTLFCGLDDSLKVYSWE 266
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 231 GHRKTVTYIRFLDVDTLVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F + LV G + G +KLW++ +++++RT GH N + G
Sbjct: 67 GHTSPVESLAFDTAEVLVLGGASTGVIKLWDLEEAKMVRTLTGH--RSNCTAIEFHPFGE 124
Query: 290 LLGCGSETNQVFVYDVR 306
GS + ++D+R
Sbjct: 125 FFASGSADTNLKLWDIR 141
>gi|433644188|ref|YP_007276757.1| WD40 repeat-containing protein [Mycobacterium smegmatis JS623]
gi|433300908|gb|AGB26727.1| WD40 repeat-containing protein [Mycobacterium smegmatis JS623]
Length = 1345
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 29/270 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA-VVDHSKVCDYYICTPAKLSSL 103
+ + F P ATGG + +R++N + P+ A + H++ +++S+
Sbjct: 894 VNAVAFSPDGRRLATGGSDKTVRLWNADT---GQPIGAPLTGHTE----------QVTSV 940
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P GR L SG YD V + E P+ V+SV +S L ASG
Sbjct: 941 AFSP--DGRRLASGSYDKTVRMWSAETGQPVGPPMTGHTNEVFSVAFSPDGHRL-ASGDS 997
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
DG +++W R D + ++ + A SA F P G L AG DK +D
Sbjct: 998 DGELRLW--RTDAAQRLTGLAEIALDSA-----FSPDGHRLATAGF-DKTVQLWDAATGE 1049
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT-YKGHVNNRNFVG 281
L GH +VT + F D L +A D ++LWN + + GH +N + V
Sbjct: 1050 PLGLPLTGHTGSVTSVAFSPDGRRLASASADKTVRLWNADTGQPFGVPLIGHTDNVSGVA 1109
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G + S V ++D G+P+
Sbjct: 1110 FSP--DGHRVASASYDKTVRLWDADTGQPI 1137
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 28/199 (14%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQP-----SASRSAVCCVEFHPFGSSLVAAGCADKK 213
A+G DDG +++WD +T QP S S V + F P G L A G AD
Sbjct: 735 ATGGDDGMVRIWD--------AATGQPVGAPLSGHSSGVRGLAFSPDGKRL-AGGSADHT 785
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT-YK 271
A +D + GH V+ + F D L TA D ++ W+ + + + T
Sbjct: 786 ALMWDTASGKPVGGLLTGHTDGVSAVAFSPDGRRLATASLDNTVRFWDADTGKPMGTSLT 845
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
GH G++ G + + V ++ G+ + P+T G+V++
Sbjct: 846 GHTE--GIEGIAFSPDGHRMATAANDKTVRMWSADTGQAIGA----PLTG---HTGYVNA 896
Query: 332 VCWRRVGEDECTLVAGGSD 350
V + D L GGSD
Sbjct: 897 VAF---SPDGRRLATGGSD 912
>gi|353242781|emb|CCA74394.1| hypothetical protein PIIN_08346 [Piriformospora indica DSM 11827]
Length = 1464
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 42/278 (15%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYN------IKSVLVDHP-VVAVVDHSKVCDYYIC 95
+S+ ++F P TGG R IR ++ I L H VVA V +S
Sbjct: 806 ESVQSLDFSPDGMRIVTGGWDRTIRQWDAATGDPIGQPLKGHSYVVASVHYS-------- 857
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
GR + SG +D + +D + I RV S D
Sbjct: 858 -------------LDGRRIISGSWDHRIRVWDAKSGASIGTTPHVHTNRVLCTALS-SDG 903
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCV------STVQPSASRSAVCCVEFHPFGSSLVAAGC 209
L SGS D T+++WD + G+ + S + P + + CV F P + +A+G
Sbjct: 904 SLIVSGSIDHTLRLWD--VNTGEPIGEPFGNSFLHPPTHTAPIICVAFSPGPPTRIASGS 961
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWN-VNDSRVI 267
AD A +DV+ + + GH+ VT + F T +VT D L+LW+ ++
Sbjct: 962 ADATARLWDVQTR-QQIAILHGHKAPVTCLAFSPCGTCIVTGSADKSLRLWDGFTGAQTG 1020
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
T +GH ++ WR+G L+ GS + V++
Sbjct: 1021 NTLEGHTG--GITCVTFWRNGALIVSGSRDTTLRVWNT 1056
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L ASGS DGT ++WD G + +++ +V ++F P G +V G D+
Sbjct: 773 DGRLIASGSRDGTARIWDV-STGARVGQSLR--GHEESVQSLDFSPDGMRIVTGGW-DRT 828
Query: 214 AYAYDVRKMVDPV-LVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D DP+ GH V + + LD +++ D +++W+ I T
Sbjct: 829 IRQWDA-ATGDPIGQPLKGHSYVVASVHYSLDGRRIISGSWDHRIRVWDAKSGASIGTTP 887
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
HV+ + ++ G L+ GS + + ++DV GEP+
Sbjct: 888 -HVHTNRVLCTALSSDGSLIVSGSIDHTLRLWDVNTGEPI 926
>gi|119489225|ref|XP_001262864.1| U5 snRNP complex subunit, putative [Neosartorya fischeri NRRL 181]
gi|119411022|gb|EAW20967.1| U5 snRNP complex subunit, putative [Neosartorya fischeri NRRL 181]
Length = 359
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 145/367 (39%), Gaps = 61/367 (16%)
Query: 17 ERARCEWDFNLRTTVSSSSSPNAAV--------------------SDSIGVIEFDPSDSV 56
+R + + D N T V SSS N + S + + FDP+
Sbjct: 21 KRKKSDGDINAGTAVVKSSSQNGTLVQAIPRTSGLDAPIMELTGHSGEVFTVRFDPTAQH 80
Query: 57 FATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
A+G + R I ++N + + +Y + T + + L + R + S
Sbjct: 81 IASGSMDRSILLWNT--------------YGQCENYGVLTGHRGAILDLQWSRDSRAIFS 126
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSKGDPVLGASGSDDGTMQMWDPRCD 175
D + +DLE I R G + + +D SK L S SDDG + +WDPR
Sbjct: 127 ASADMTLASWDLETGQRI--RRHVGHEEIINCLDISKRGQELLVSASDDGCIGIWDPRQK 184
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
++ + + V G+ + + G D + +D+RK V GH T
Sbjct: 185 -----HAIEYLETELPITAVALSEAGNEIYSGGI-DNTIHVWDLRKK-SVVYSMAGHTDT 237
Query: 236 VTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVN--NRNFVGLSVWRHG 288
VT ++ D TL++ D ++ W++ +R IRTY G +N + S G
Sbjct: 238 VTSLQISPDSQTLLSNSHDSTVRTWDIRPFAPTNRHIRTYDGAPMGLEKNLIRASWDPKG 297
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
+ GS V V+D R G+ ++ +G V+ V R +E +V+G
Sbjct: 298 EKIAAGSGDRSVVVWDFRTGKLLY--------KLPGHKGTVNDV--RFSPNNEPIIVSGS 347
Query: 349 SDGLLHV 355
SD L +
Sbjct: 348 SDRTLML 354
>gi|302769704|ref|XP_002968271.1| hypothetical protein SELMODRAFT_169971 [Selaginella moellendorffii]
gi|302788672|ref|XP_002976105.1| hypothetical protein SELMODRAFT_443046 [Selaginella moellendorffii]
gi|300156381|gb|EFJ23010.1| hypothetical protein SELMODRAFT_443046 [Selaginella moellendorffii]
gi|300163915|gb|EFJ30525.1| hypothetical protein SELMODRAFT_169971 [Selaginella moellendorffii]
Length = 312
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 61/255 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHG-GRRVWSVDYSKGDPV 156
+SS+K+ P G++LGS D + + + K + + G WS D
Sbjct: 27 VSSVKFSP--DGKLLGSSSADKTIKLWSADDGKLLKTLQGHSEGISDLAWS-----SDSR 79
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD C+ +C+ ++ + V CV F+P SS++A+G D+
Sbjct: 80 YVCSASDDKTLRVWD--CETSECLKILK--GHTNFVFCVNFNP-QSSVIASGSYDETVRL 134
Query: 217 YDVRK---------MVDPVL---------------------------------VFDGHRK 234
+DV+ DPV + D
Sbjct: 135 WDVKTGKCLKVLPAHSDPVTAVHYNRDGSLIVSSSYDGLMRIWDSQTGNCLKTLIDDENP 194
Query: 235 TVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + AGT D ++LWN + ++TY GHVNN+ F SV +G +
Sbjct: 195 PVSFVKFSPNGKFIVAGTLDNTVRLWNYQTGKFLKTYTGHVNNKYCIFSAFSV-TNGKYI 253
Query: 292 GCGSETNQVFVYDVR 306
GSE N ++++D++
Sbjct: 254 VSGSEDNCIYLWDLQ 268
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
V+ SG YD V +D++ + H V +V Y++ D L S S DG M++WD
Sbjct: 122 VIASGSYDETVRLWDVKTGKCLKVLPAHSDP-VTAVHYNR-DGSLIVSSSYDGLMRIWDS 179
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRKMVDPVLVFD 230
+ G C+ T+ V V+F P G + AG D + + Y K + +
Sbjct: 180 QT--GNCLKTLIDD-ENPPVSFVKFSPNGK-FIVAGTLDNTVRLWNYQTGKFLK---TYT 232
Query: 231 GH--RKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
GH K + F + +V+ D C+ LW++ V++ +GH +
Sbjct: 233 GHVNNKYCIFSAFSVTNGKYIVSGSEDNCIYLWDLQSKSVVQKLEGHTD 281
>gi|145525875|ref|XP_001448754.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416309|emb|CAK81357.1| unnamed protein product [Paramecium tetraurelia]
Length = 2171
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 33/289 (11%)
Query: 21 CEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV 80
C+W N+R + + N S SI P+ A+GG +I +++IK+
Sbjct: 1751 CKWK-NIRI-IEQNKFENVIYSISI-----SPNSFTIASGGDDNQIYLWDIKTGQ----- 1798
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
SK+C++ + S+ + P G +L SG D + +D++ + F+ H
Sbjct: 1799 ----QKSKLCNH----TGWVRSVCFSP--DGTILASGGDDQSICLWDVQTEQQQFKLIGH 1848
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
+ V+SV +S L ASGS+D T++ WD + K + + SA+ V+F P
Sbjct: 1849 TSQ-VYSVCFSPNGQTL-ASGSNDKTIRFWDVKTGKKK----FKQHSFSSAIYSVQFSPD 1902
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
G++L A G D+ DV+ ++ GH V + F D TL + D ++LW
Sbjct: 1903 GTTL-AFGSLDECICLLDVKTGQQKSRLY-GHEYAVKSVCFSPDGTTLASGSDDKTIRLW 1960
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ + KGH N L G L GS+ + ++D++ G
Sbjct: 1961 DTKTGQQKFILKGHAN--AVYSLCFSPDGSTLASGSDDMSIRLWDIKTG 2007
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 29/215 (13%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P+ A+G + IR +++K+ HS Y S+++ P
Sbjct: 1857 FSPNGQTLASGSNDKTIRFWDVKT-----GKKKFKQHSFSSAIY--------SVQFSP-- 1901
Query: 110 SGRVLGSGDYDGVVMEYDL---EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
G L G D + D+ ++K ++ + V SV +S L ASGSDD T
Sbjct: 1902 DGTTLAFGSLDECICLLDVKTGQQKSRLYGHE----YAVKSVCFSPDGTTL-ASGSDDKT 1956
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD + K + +A S +C F P GS+L A+G D +D++ +
Sbjct: 1957 IRLWDTKTGQQKFILKGHANAVYS-LC---FSPDGSTL-ASGSDDMSIRLWDIKTGLQKQ 2011
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV 261
+ DGH+K V + F D + + D +++W+V
Sbjct: 2012 KL-DGHKKEVLQVCFYDETIIASCSGDNSIRVWDV 2045
>gi|427730622|ref|YP_007076859.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
gi|427366541|gb|AFY49262.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
Length = 1232
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 27/225 (12%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
+VWSV +L ASGS D T+++WD G C+ T+Q + V F S
Sbjct: 749 KVWSVKLHPQGNIL-ASGSGDHTVKVWD--ITTGSCIHTLQ--GHTDWIKSVAFS--SSG 801
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND 263
++A+G D+ +DV + V + V +GH + I F++ L + D ++LW++
Sbjct: 802 ILASGSLDQTIRLWDVDQGVG-LGVLEGHSNGILAIAFINDQILASCSIDCTIRLWDITT 860
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--------WVHD 315
+ ++T +GH N+ + + + G LL G++ + ++DV GE WV
Sbjct: 861 FQCLKTLQGHANSVDAIAAN--PQGILLATGADDFSLKLWDVATGECFRTFKGRNNWVKS 918
Query: 316 --FEPVT---AAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHV 355
+ P+T A+G+E V W G EC ++ G +D + V
Sbjct: 919 VAWSPMTAIVASGNEDRTVR--LWTLDG--ECRILYGHTDLIFDV 959
Score = 47.8 bits (112), Expect = 0.009, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 147 SVDYSKGDP--VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
SVD +P +L A+G+DD ++++WD G+C T + + V V + P +++
Sbjct: 873 SVDAIAANPQGILLATGADDFSLKLWD--VATGECFRTFK--GRNNWVKSVAWSPM-TAI 927
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
VA+G D+ + + + GH + + F D TL +A D +KLW+V
Sbjct: 928 VASGNEDRTVRLW---TLDGECRILYGHTDLIFDVDFAPDGHTLASASADTTIKLWDVTT 984
Query: 264 SRVIRTYKGHV 274
+ +T +GHV
Sbjct: 985 GQCSKTLQGHV 995
Score = 45.8 bits (107), Expect = 0.036, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 10/164 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR L S YD +D + H G SV +S L A GS D T+ +W
Sbjct: 1007 GRFLASTSYDKASQLWDAATGQLLDTFPVHLGM---SVAFSPDSTKL-AFGSFDYTVNIW 1062
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D +C T+ S + V V F P G +L ++ +DV + + +
Sbjct: 1063 D--ITTKQCYRTI--SGHHNWVWWVAFSPDGRTLATGSSVERIIKLWDV-ETGECLHTLQ 1117
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GH + I F D TL + +D +KLW+V I T +GH
Sbjct: 1118 GHEDMLWAIAFSPDGSTLASTSSDNTIKLWDVGSGNCIATLEGH 1161
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 13/153 (8%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVST---VQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
A+G DG + +WD VS+ ++ A CV F P GS+L AG D
Sbjct: 637 ATGHFDGYLIIWD-------VVSSQQLIECQAHIGLTWCVAFSPDGSTLATAG-QDGNIK 688
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+DV+ + H ++ + D TL+++ + ++ W++N + +GH +
Sbjct: 689 LWDVKTGQCWQTLASHHGGVLSVVFHHDGTTLISSYAESTIRFWDINLGECTQILRGHSS 748
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
V L G +L GS + V V+D+ G
Sbjct: 749 KVWSVKLH--PQGNILASGSGDHTVKVWDITTG 779
>gi|70982352|ref|XP_746704.1| U5 snRNP complex subunit [Aspergillus fumigatus Af293]
gi|66844328|gb|EAL84666.1| U5 snRNP complex subunit, putative [Aspergillus fumigatus Af293]
gi|159123053|gb|EDP48173.1| U5 snRNP complex subunit, putative [Aspergillus fumigatus A1163]
Length = 359
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 129/324 (39%), Gaps = 51/324 (15%)
Query: 17 ERARCEWDFNLRTTVSSSSSPNAAV--------------------SDSIGVIEFDPSDSV 56
+R R + D N T V SSS N + S + + FDP+
Sbjct: 21 KRKRSDGDINAGTAVVKSSSQNGTLVQAIPRTSGLDAPIMELTGHSGEVFTVRFDPTAQH 80
Query: 57 FATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
A+G + R I ++N + + +Y + T + + L + R + S
Sbjct: 81 IASGSMDRSILLWNT--------------YGQCENYGVLTGHRGAILDLQWSRDSRSIFS 126
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSKGDPVLGASGSDDGTMQMWDPRCD 175
D + +DLE I R G + + +D SK L S SDDG + +WDPR
Sbjct: 127 ASADMTLASWDLETGQRI--RRHVGHEEIINCLDISKRGQELLVSASDDGCIGIWDPRQK 184
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
++ + + V G+ + + G D + +D+RK V GH T
Sbjct: 185 -----HAIEYLETELPITAVALSEAGNEIYSGGI-DNTIHVWDLRKK-SVVYSMAGHTDT 237
Query: 236 VTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVN--NRNFVGLSVWRHG 288
+T ++ D TL++ D ++ W++ +R IRTY G +N + S G
Sbjct: 238 ITSLQISPDSQTLLSNSHDSTVRTWDIRPFAPTNRHIRTYDGAPMGLEKNLIRASWDPKG 297
Query: 289 GLLGCGSETNQVFVYDVRWGEPVW 312
+ GS V V+D R G+ ++
Sbjct: 298 EKIAAGSGDRSVVVWDFRTGKLLY 321
>gi|298242911|ref|ZP_06966718.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
44963]
gi|297555965|gb|EFH89829.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
44963]
Length = 1248
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 39/268 (14%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLV-----------------DHPVV 81
+A +DS+ + F P + A+ I++++I+S + D ++
Sbjct: 634 SAHADSVWTLAFSPDERQLASASWDGTIKLWDIESRALLWVGWHTSAIVCLAFSPDGDLL 693
Query: 82 AVVDHS---KVCDYYICT-------PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
A H +V D + T P + +L W T GR L S DG + + +
Sbjct: 694 ASGGHDASIRVWDPKLGTLLQDVSHPGAVWALAWS--TDGRRLASSGSDGHIQLWKRQPT 751
Query: 132 VPIFERDEHGGRRVW--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASR 189
+R G W + +S VL AS S DGT+++W G+CV T++ R
Sbjct: 752 GLAHDRQALAGHNNWVRGLAFSPDGSVL-ASASWDGTVKLWA--LTSGRCVQTLKGHTQR 808
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
V C+ + P G++L A+G D +DV++ V V GH V + F D L+
Sbjct: 809 --VHCLAWSPDGATL-ASGSFDHTIRLWDVQRGRSRV-VLSGHSAAVYSLTFTSDSRHLL 864
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+ DG L+LW V +R +G+ +
Sbjct: 865 SGSDDGTLRLWEVERGESLRVLQGYAAS 892
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 135/313 (43%), Gaps = 40/313 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P SV A+ ++++ + S V + H++ ++ L W P
Sbjct: 770 LAFSPDGSVLASASWDGTVKLWALTS---GRCVQTLKGHTQ----------RVHCLAWSP 816
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G L SG +D + +D+++ H V+S+ ++ L SGSDDGT+
Sbjct: 817 --DGATLASGSFDHTIRLWDVQRGRSRVVLSGHSAA-VYSLTFTSDSRHL-LSGSDDGTL 872
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ + G+ + +Q A +++ +++ P + LV+ G D ++V + P
Sbjct: 873 RLWE--VERGESLRVLQGYA--ASLYDLDWSPDATQLVSGGT-DTHVTVWEVASGM-PRG 926
Query: 228 VFDGHRKTVTYIRFLDVDTLVTA-GTDGCLKLWNVNDSRVIRTYKGHVN-NRNFVGLSVW 285
V GH +TV + + L+ + G D ++LW+ ++ + + + F G++
Sbjct: 927 VLRGHSRTVYGVAWSPYGRLLASCGWDHAIRLWDPTTGTCVQILRDLDHPDTVFSGVAWS 986
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWV-HDFEPVTAAGSERGFVSSVCWRRVGEDECTL 344
G L G+ V V+D P W+ F P ++ V W D L
Sbjct: 987 PDGERLASGTLLQGVLVWDGTARSPHWLSQQFPP---------WIRRVAW---SPDGTRL 1034
Query: 345 VAGGSDGLLHVFV 357
V GG DG HV+V
Sbjct: 1035 VGGGGDG--HVYV 1045
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 12/199 (6%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
R L S +DG + +D+E + ++ H V GD L ASG D ++++WD
Sbjct: 650 RQLASASWDGTIKLWDIESRALLWV-GWHTSAIVCLAFSPDGD--LLASGGHDASIRVWD 706
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC-ADKKAYAYDVRKMVDPVLVFD 230
P K + +Q + AV + + G L ++G + + +
Sbjct: 707 P-----KLGTLLQDVSHPGAVWALAWSTDGRRLASSGSDGHIQLWKRQPTGLAHDRQALA 761
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D L +A DG +KLW + R ++T KGH + + S G
Sbjct: 762 GHNNWVRGLAFSPDGSVLASASWDGTVKLWALTSGRCVQTLKGHTQRVHCLAWSP--DGA 819
Query: 290 LLGCGSETNQVFVYDVRWG 308
L GS + + ++DV+ G
Sbjct: 820 TLASGSFDHTIRLWDVQRG 838
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 23/259 (8%)
Query: 19 ARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH 78
A C WD +R ++ + + D D D+VF+ G+A + S +
Sbjct: 948 ASCGWDHAIRLWDPTTGTCVQILRD------LDHPDTVFS--GVAWSPDGERLASGTLLQ 999
Query: 79 PVVAVVDHSKVCDYYICT--PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFE 136
V+ V D + +++ P + + W P + R++G G DG V +D + +
Sbjct: 1000 GVL-VWDGTARSPHWLSQQFPPWIRRVAWSPDGT-RLVGGGG-DGHVYVWDAFDGTLLQQ 1056
Query: 137 RDEHGGRRV---WSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
H G + WS D S+ G+ G +DG + +WD + T P V
Sbjct: 1057 LSGHQGAVMSVAWSPDGSRLASGGGSRGQEDGELLVWDAHNGEYVRILTGHPGG----VS 1112
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGT 252
+ + P G L++ G D K ++V + V V +GH+ V ++ D L ++G
Sbjct: 1113 ALTWSPNGQMLISGG-RDGKVRWWEVHSG-ECVHVQEGHQGAVHALKVSPDGGRLASSGD 1170
Query: 253 DGCLKLWNVNDSRVIRTYK 271
DG + LW++ + +RT +
Sbjct: 1171 DGAIVLWDLERGKPLRTLR 1189
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 32/225 (14%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYD--------LEKKVPIFERDEHGGRRVWSVDYS 151
S + W P G L SG V+ +D L ++ P + R R WS D
Sbjct: 980 FSGVAWSP--DGERLASGTLLQGVLVWDGTARSPHWLSQQFPPWIR-----RVAWSPD-- 1030
Query: 152 KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA- 210
G ++G G DG + +WD DG Q S + AV V + P GS L + G +
Sbjct: 1031 -GTRLVGGGG--DGHVYVWDA-FDG---TLLQQLSGHQGAVMSVAWSPDGSRLASGGGSR 1083
Query: 211 ---DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRV 266
D + +D + V + GH V+ + + + L++ G DG ++ W V+
Sbjct: 1084 GQEDGELLVWDAHNG-EYVRILTGHPGGVSALTWSPNGQMLISGGRDGKVRWWEVHSGEC 1142
Query: 267 IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ +GH + L V GG L + + ++D+ G+P+
Sbjct: 1143 VHVQEGHQGAVH--ALKVSPDGGRLASSGDDGAIVLWDLERGKPL 1185
>gi|332706637|ref|ZP_08426698.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332354521|gb|EGJ34000.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 1161
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
++L S D V +D+ + H R +WSV S GD + ASGS D T+++WD
Sbjct: 601 QILASSSEDQTVRLWDIATSQCLHTLRGHRSR-IWSVAVS-GDGTIVASGSGDKTVRIWD 658
Query: 172 PRCDGGKCVSTV-QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
G+C++ + + S + AV C P G +++A+GC DK +D + +
Sbjct: 659 --VSTGECLNILPEHSQTVRAVAC---SPDG-AILASGCEDKTIKLWD-SDTGECLSTLQ 711
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH + + F D TL ++ D ++LWN++ + ++ +GH + +G S + G
Sbjct: 712 GHSHQIRSVAFSPDGTTLASSSDDKTVRLWNLSTGKCVKMLRGHTKSIRSIGFS--KDGT 769
Query: 290 LLGCGSETNQVFVYDVRWGE 309
L S+ V +++ GE
Sbjct: 770 TLASSSDDKTVRLWNFSTGE 789
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 13/216 (6%)
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
P + S+ + P +G +L SG D V +D+ F+ VWSV +S
Sbjct: 923 PKWVLSVAFSP--NGEILASGHNDDRVRLWDISTG-ECFQTLLGHTSLVWSVAFSPDGTT 979
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASG +D T+++WD G C+ST+Q R+ + V F G ++A+GC D
Sbjct: 980 L-ASGCEDQTVKLWD--VGTGDCLSTLQ--GHRNIIKSVVFSGDGR-ILASGCEDHTVRV 1033
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
+DV + + GH + + F L+ +G+ D KLW+V ++T GH N
Sbjct: 1034 WDV-GTGECLNTLRGHTHRLRSVAFNPNGKLIASGSYDKTCKLWDVQTGECLKTLHGHTN 1092
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V S R G +L S + +D+ G+ +
Sbjct: 1093 VVWSVAFS--RDGLMLASSSNDGTIKFWDIEKGQCI 1126
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 112/264 (42%), Gaps = 29/264 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I P A+G + +R++NI + + + + + S+ + P
Sbjct: 804 IALSPDGVTLASGSDDQTVRLWNINT-------------GQCLNTFRGYTNGVWSIAFSP 850
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G L SG D V +D+ + H ++SV +S+ +L SGS D T+
Sbjct: 851 --DGTTLASGSEDQTVRLWDVGTGECLDTLRGHTNL-IFSVAFSRDGAIL-VSGSKDQTL 906
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD G+C++T V V F P G ++A+G D + +D+ +
Sbjct: 907 RLWD--ISTGECLNTFH---GPKWVLSVAFSPNGE-ILASGHNDDRVRLWDISTG-ECFQ 959
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH V + F D TL + D +KLW+V + T +GH RN + V+
Sbjct: 960 TLLGHTSLVWSVAFSPDGTTLASGCEDQTVKLWDVGTGDCLSTLQGH---RNIIKSVVFS 1016
Query: 287 -HGGLLGCGSETNQVFVYDVRWGE 309
G +L G E + V V+DV GE
Sbjct: 1017 GDGRILASGCEDHTVRVWDVGTGE 1040
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 130/305 (42%), Gaps = 41/305 (13%)
Query: 55 SVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVL 114
++ A+G + +RI+++ + + + +HS+ C+P G +L
Sbjct: 643 TIVASGSGDKTVRIWDVST---GECLNILPEHSQTVRAVACSP------------DGAIL 687
Query: 115 GSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRC 174
SG D + +D + + H ++ SV +S L AS SDD T+++W+
Sbjct: 688 ASGCEDKTIKLWDSDTGECLSTLQGHS-HQIRSVAFSPDGTTL-ASSSDDKTVRLWN--L 743
Query: 175 DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRKMVDPVLVFDGH 232
GKCV ++ ++ + F G++L A+ DK + + + + ++ + GH
Sbjct: 744 STGKCVKMLR--GHTKSIRSIGFSKDGTTL-ASSSDDKTVRLWNFSTGECLNKLY---GH 797
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
V I D TL + D ++LWN+N + + T++G+ N + S G L
Sbjct: 798 TNGVWSIALSPDGVTLASGSDDQTVRLWNINTGQCLNTFRGYTNGVWSIAFS--PDGTTL 855
Query: 292 GCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
GSE V ++DV GE + + RG + + D LV+G D
Sbjct: 856 ASGSEDQTVRLWDVGTGECL-----------DTLRGHTNLIFSVAFSRDGAILVSGSKDQ 904
Query: 352 LLHVF 356
L ++
Sbjct: 905 TLRLW 909
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 33/252 (13%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + +++ P +S + F P+ + A+G ++R+++I +
Sbjct: 909 WDISTGECLNTFHGPKWVLS-----VAFSPNGEILASGHNDDRVRLWDIST---GECFQT 960
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTS--GRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
++ H+ SL W S G L SG D V +D+ + H
Sbjct: 961 LLGHT--------------SLVWSVAFSPDGTTLASGCEDQTVKLWDVGTGDCLSTLQGH 1006
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
R + GD + ASG +D T+++WD G+C++T++ R + V F+P
Sbjct: 1007 --RNIIKSVVFSGDGRILASGCEDHTVRVWD--VGTGECLNTLRGHTHR--LRSVAFNPN 1060
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLW 259
G L+A+G DK +DV+ + + GH V + F D L ++ DG +K W
Sbjct: 1061 GK-LIASGSYDKTCKLWDVQTG-ECLKTLHGHTNVVWSVAFSRDGLMLASSSNDGTIKFW 1118
Query: 260 NVNDSRVIRTYK 271
++ + I+T +
Sbjct: 1119 DIEKGQCIKTLR 1130
>gi|38344202|emb|CAE05767.2| OSJNBa0064G10.18 [Oryza sativa Japonica Group]
Length = 935
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 20/243 (8%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ + ++ LK TS RVL +G D V + + K I H V SV++
Sbjct: 14 FVAHSSNVNCLKIGRKTS-RVLVTGGDDHKVNLWAIGKPNSILSLSGHTSA-VESVNFDS 71
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ V A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G D
Sbjct: 72 TE-VFVAAGAASGTIKLWD--LEEAKIVRTL--TGHRSNCMSVDFHPFGE-FFASGSLDT 125
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D+R+ + + GH + V IRF D +V+ G D +KLW++ +++ +K
Sbjct: 126 NLKIWDIRRK-GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNVVKLWDLTAGKLLHDFK 184
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
H + H LL GS V +D + FE + + G E V S
Sbjct: 185 CHEGQIQCIDFHP--HEFLLATGSSDKTVKFWD--------LETFELIGSTGPETTGVRS 234
Query: 332 VCW 334
+ +
Sbjct: 235 MTF 237
>gi|354568690|ref|ZP_08987853.1| WD40 repeat-containing protein [Fischerella sp. JSC-11]
gi|353539944|gb|EHC09424.1| WD40 repeat-containing protein [Fischerella sp. JSC-11]
Length = 382
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 42/273 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+ G+++ I ++++++ ++ + ++S+ + P
Sbjct: 125 VAFSPDRKTLASCGLSQTIELWDLET-------------GQIIRQFTGKSYGVNSISFSP 171
Query: 108 GTSGRVLGSGDYDGVVMEYDLEK---------KVPIFERDEHGGRRVWSVDYSKGDPVLG 158
G++L SGD V ++L+ +P+ E G V SV S+G+ LG
Sbjct: 172 --DGQILASGDRGRSVQLWNLKTGKTVRTPSGNIPVMEH----GDWVNSVAISQGE--LG 223
Query: 159 ---ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
ASGS D T+++W + + ++T++ S V V F P G ++A+G AD+
Sbjct: 224 GTVASGSHDKTIKLWGLQTK--EAIATLK--GHLSLVYAVAFSPDGQ-ILASGSADETIK 278
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D++ + + GH V + F D L + DG +KLWN+ I T GH
Sbjct: 279 LWDIQTK-EEICTLTGHTDEVYSLAFSPDGQILASGSADGTIKLWNIQTKEEICTLTGHT 337
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
+ + S G +L GS + ++ V +
Sbjct: 338 DEVYSLAFS--PDGQILASGSADGSIRIWLVEY 368
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 22/222 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNI---KSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+ I F P + A+G R ++++N+ K+V + V++H D+ ++
Sbjct: 164 VNSISFSPDGQILASGDRGRSVQLWNLKTGKTVRTPSGNIPVMEHG---DW-------VN 213
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ G G + SG +D + + L+ K I H V++V +S +L ASG
Sbjct: 214 SVAISQGELGGTVASGSHDKTIKLWGLQTKEAIATLKGH-LSLVYAVAFSPDGQIL-ASG 271
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD + C T V + F P G ++A+G AD ++++
Sbjct: 272 SADETIKLWDIQTKEEICTLT----GHTDEVYSLAFSPDG-QILASGSADGTIKLWNIQT 326
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+ + GH V + F D L + DG +++W V
Sbjct: 327 K-EEICTLTGHTDEVYSLAFSPDGQILASGSADGSIRIWLVE 367
>gi|209524278|ref|ZP_03272828.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
maxima CS-328]
gi|209495369|gb|EDZ95674.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
maxima CS-328]
Length = 704
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GRV+ SG D V +DL K I H R + ++ +S+ L ASGS D T+ +W
Sbjct: 475 GRVIASGSRDNTVKLWDLHSKQEIATLKGHE-RDITTIAFSRDGQTL-ASGSHDHTITLW 532
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV--RKMVDPVLV 228
+ + T++ + V F P G L+A+ D +D+ R+ + +L
Sbjct: 533 --YLGTNELIGTLR--GHNREIRAVAFSPNGR-LLASASQDNTVKLWDLNRREEISTLLS 587
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
D + + R D TL++ +D LKLW+V V+ T GH ++ ++V G
Sbjct: 588 HDNSVNAIAFSR--DGQTLISGSSDKTLKLWDVTTKEVMATLHGH--SQGIKSIAVSPDG 643
Query: 289 GLLGCGSETNQVFVYDVRWGEPV 311
++ G + + V ++D++ E +
Sbjct: 644 RIIASGGDDDTVQLWDLKNQEAI 666
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 20/199 (10%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGSDD T+++W + +ST+ + A+ + P G ++A+G D +D
Sbjct: 437 ASGSDDNTVRLWS--LQTFEHLSTL--TGHGGAINSIAISPDG-RVIASGSRDNTVKLWD 491
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + + GH + +T I F D TL + D + LW + + +I T +GH NR
Sbjct: 492 LHSKQE-IATLKGHERDITTIAFSRDGQTLASGSHDHTITLWYLGTNELIGTLRGH--NR 548
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
++ +G LL S+ N V ++D ++ E ++ S V+++ + R
Sbjct: 549 EIRAVAFSPNGRLLASASQDNTVKLWD--------LNRREEISTLLSHDNSVNAIAFSRD 600
Query: 338 GEDECTLVAGGSDGLLHVF 356
G+ TL++G SD L ++
Sbjct: 601 GQ---TLISGSSDKTLKLW 616
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG +D + + L I H R + +V +S +L AS S D T+++W
Sbjct: 517 GQTLASGSHDHTITLWYLGTNELIGTLRGHN-REIRAVAFSPNGRLL-ASASQDNTVKLW 574
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + + +ST+ + ++V + F G +L++ G +DK +DV + +
Sbjct: 575 D--LNRREEISTLL--SHDNSVNAIAFSRDGQTLIS-GSSDKTLKLWDVTTK-EVMATLH 628
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH + + I D + + G D ++LW++ + I T +GH + + S R
Sbjct: 629 GHSQGIKSIAVSPDGRIIASGGDDDTVQLWDLKNQEAIATLRGHSSKIEAIAFSPKR--P 686
Query: 290 LLGCGSETNQVFVYDV 305
LL GS + ++ +
Sbjct: 687 LLVSGSHNRNLEIWQI 702
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+GR+L S D V +DL ++ I H V ++ +S+ L SGS D T+++
Sbjct: 558 NGRLLASASQDNTVKLWDLNRREEISTLLSHDN-SVNAIAFSRDGQTL-ISGSSDKTLKL 615
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + ++T+ + + P G ++A+G D +D++ + +
Sbjct: 616 WD--VTTKEVMATLH--GHSQGIKSIAVSPDG-RIIASGGDDDTVQLWDLKNQ-EAIATL 669
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
GH + I F L+ +G+ + L++W + D
Sbjct: 670 RGHSSKIEAIAFSPKRPLLVSGSHNRNLEIWQIPD 704
>gi|66519672|ref|XP_393828.2| PREDICTED: katanin p80 WD40-containing subunit B1 [Apis mellifera]
Length = 873
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRVL +G D V + + K+ I H + V + + + ++ A GS G +++
Sbjct: 30 SGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHT-TPIECVRFGQTEDLVCA-GSQTGALKI 87
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K T+ + ++ + C++FHP+G L+A+G D +D+R+ + +
Sbjct: 88 WD--LEHAKLARTL--TGHKAGIRCMDFHPYGE-LLASGSLDTAIKLWDIRRK-GCIFTY 141
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V ++F D + +AG +G +KLW++ R +R + H V H
Sbjct: 142 KGHNRMVNSLKFSPDGQWIASAGEEGMVKLWDLRAGRQLREFSEHRGPATTVEFHP--HE 199
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V +D+
Sbjct: 200 FLLASGSADKTVHFWDL 216
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 84 VDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR 143
++H+K+ A + + + P G +L SG D + +D+ +K IF H R
Sbjct: 90 LEHAKLARTLTGHKAGIRCMDFHP--YGELLASGSLDTAIKLWDIRRKGCIFTYKGHN-R 146
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
V S+ +S D AS ++G +++WD R G+ + S R VEFHP
Sbjct: 147 MVNSLKFSP-DGQWIASAGEEGMVKLWDLR--AGRQLREF--SEHRGPATTVEFHPH-EF 200
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND 263
L+A+G ADK + +D+ H + + F + AG LK++
Sbjct: 201 LLASGSADKTVHFWDLESFQLVSSTDQSHSSAIRCLYFSQGGECLFAGCHDVLKVYGWEP 260
Query: 264 SRVI 267
R +
Sbjct: 261 GRTL 264
>gi|378728039|gb|EHY54498.1| Ca2+/calmodulin-dependent protein kinase [Exophiala dermatitidis
NIH/UT8656]
Length = 359
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 31/273 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + FDP+ A+G + R I ++N + + +Y I T K +
Sbjct: 66 SGEVFAVRFDPTGQHIASGSMDRSIMLWNT--------------YGQCDNYGILTGHKGA 111
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSKGDPVLGAS 160
L + +++ S D V +DLE + I R G V + +D S+ L S
Sbjct: 112 VLDLQWSRDSKIIYSASADMTVASWDLETGLRI--RKHVGHEEVINCLDLSRRGQDLLLS 169
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDDG + +WDPR V ++ +AV E + +G D +D R
Sbjct: 170 GSDDGCIGIWDPRQKA--AVDYIETEFPITAVAMAE----QGHEIYSGGIDNDIKVWDAR 223
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHVN 275
KM + + GH TVT + D TL++ D ++ W+V +R +R Y G
Sbjct: 224 KM-EVIYTLSGHGDTVTSLEVSPDSQTLLSNSHDSTVRTWDVRPFAPVNRAVRVYDGAPA 282
Query: 276 --NRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+N + S G + GS V V+D R
Sbjct: 283 GFEKNLIRASWSPKGDKICAGSGDRTVVVWDTR 315
>gi|321465981|gb|EFX76979.1| hypothetical protein DAPPUDRAFT_213756 [Daphnia pulex]
Length = 860
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 112/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRVL +G D V + + K I H + +V +S + ++ A GS G +++
Sbjct: 30 SGRVLVTGGDDKKVNLWAIGKPSCIMSLSGHTTA-IEAVRFSPTEELVCA-GSAAGAVKV 87
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + + V T+ + R+ + ++FHP+G +A G D +D+R+ + +
Sbjct: 88 WD--LEAARMVRTL--TGHRAGIKALDFHPYGD-FLATGSTDTNMKLWDIRRK-GCIFTY 141
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH TV +RF D + +AG DG +K+W++ R++ + H V H
Sbjct: 142 KGHSSTVNSLRFSPDGQWVASAGDDGYVKIWDLRAGRLLSELREHTAAVTEVVFH--PHE 199
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL G+ +V +D + +F V+ + E + S+ + E +C L +
Sbjct: 200 FLLASGAADRRVLFWD--------LENFTLVSNSDPETSGIRSIYFH--PEGKC-LFSAA 248
Query: 349 SDGL 352
DGL
Sbjct: 249 QDGL 252
>gi|19113627|ref|NP_596835.1| splicing factor Spf38 [Schizosaccharomyces pombe 972h-]
gi|17368094|sp|O94620.1|CWF17_SCHPO RecName: Full=Pre-mRNA-splicing factor cwf17; AltName:
Full=Complexed with cdc5 protein 17
gi|4495124|emb|CAB38691.2| splicing factor Spf38 [Schizosaccharomyces pombe]
Length = 340
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 37/277 (13%)
Query: 47 VIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK--LSSLK 104
V FDPS S FA+GG+ R+I ++N+ V +Y + K ++ L+
Sbjct: 55 VARFDPSGSYFASGGMDRQILLWNV--------------FGDVKNYGVLNGCKGAITDLQ 100
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W + RV+ D +M +D I + H G V ++D K L S SDD
Sbjct: 101 WSRDS--RVVYCSSSDTHLMSWDAVSGQKIRKHKGHAG-VVNALDVLKVGSELLTSVSDD 157
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
TM++WD R C+ T++ +AV + + V G D +D+R
Sbjct: 158 CTMKVWDSRSK--DCIKTIEEKYPLTAVAIAQ----QGTQVFIGGIDGAIKIWDLRNN-H 210
Query: 225 PVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV----NDSRVIRTYKG--HVNNR 277
V GH+ +T + D +L++ D +++++V + R ++ ++G H
Sbjct: 211 CSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEH 270
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVY----DVRWGEP 310
N +G++ R+ +G GS V+V+ D+R+ P
Sbjct: 271 NLLGVAWSRNSRFVGAGSSDKNVYVWSATGDLRYVLP 307
>gi|17227525|ref|NP_484073.1| hypothetical protein alr0029 [Nostoc sp. PCC 7120]
gi|17135007|dbj|BAB77553.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
Length = 1227
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 34/232 (14%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYIC-TPAKLSSLKWKPG 108
F P + A+G I+++++ H+ C + K+ S+ + P
Sbjct: 652 FSPDSRMLASGSADSTIKLWDV--------------HTGECLKTLSKNTNKVYSVAFSP- 696
Query: 109 TSGRVLGSGDYDGVVMEYDLEK---KVPIFERDEHGGRRVWSVDYS---KGDPVLGASGS 162
GR+L S D + +D+ + + D+ VWSV +S P+L AS S
Sbjct: 697 -DGRILASASQDQTIKLWDIATGNCQQTLIGHDDW----VWSVTFSPVTDDRPLLLASSS 751
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D +++WD GKC+ T++ V V F P G +L ++G D +DV K
Sbjct: 752 ADQHIKLWD--VATGKCLKTLK--GHTREVHSVSFSPDGQTLASSG-EDSTVRLWDV-KT 805
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+F+GH K V +RF D TL + G D +KLW++ + T GH
Sbjct: 806 GQCWQIFEGHSKKVYSVRFSPDGQTLASCGEDRSIKLWDIQRGECVNTLWGH 857
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 119/272 (43%), Gaps = 38/272 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+G I ++N+K+ HP+ ++ S+ + P
Sbjct: 906 VAFSPDSQILASGRDDYTIGLWNLKTGEC-HPLRG-------------HQGRIRSVAFHP 951
Query: 108 GTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGRR-VWSVDYSKGDPVLGASGSDDG 165
G++L SG D + +D+ + + R G VW+V +S L AS S+D
Sbjct: 952 --DGKILASGSADNTIKLWDISDTNHSKYIRTLTGHTNWVWTVVFSPDKHTL-ASSSEDR 1008
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV------ 219
T+++WD D G C+ ++ + V V F P G ++A+G AD + +DV
Sbjct: 1009 TIRLWDK--DTGDCLQKLKGHSH--WVWTVAFSPDGR-ILASGSADSEIKIWDVASGKCL 1063
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ + DP G +V + LD L +A D +KLWN+ + T KGH
Sbjct: 1064 QTLTDP----QGMIWSVAF--SLDGTLLASASEDQTVKLWNLKTGECVHTLKGHEKQVYS 1117
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V S +G + GSE V ++D+ G V
Sbjct: 1118 VAFS--PNGQIAASGSEDTTVKLWDISTGSCV 1147
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VW+ +S +L ASGS D T+++WD G+C+ T+ + ++ V V F P G +
Sbjct: 647 VWAFAFSPDSRML-ASGSADSTIKLWDVHT--GECLKTLSKNTNK--VYSVAFSPDGR-I 700
Query: 205 VAAGCADKKAYAYDVRK-MVDPVLVFDGHRKTVTYIRFLDVD-----TLVTAGTDGCLKL 258
+A+ D+ +D+ L+ GH V + F V L ++ D +KL
Sbjct: 701 LASASQDQTIKLWDIATGNCQQTLI--GHDDWVWSVTFSPVTDDRPLLLASSSADQHIKL 758
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
W+V + ++T KGH + V S G L E + V ++DV+ G+
Sbjct: 759 WDVATGKCLKTLKGHTREVHSVSFS--PDGQTLASSGEDSTVRLWDVKTGQ 807
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 25/176 (14%)
Query: 47 VIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWK 106
+ F P + A+G +I+I+++ S C + P + W
Sbjct: 1033 TVAFSPDGRILASGSADSEIKIWDVA--------------SGKCLQTLTDP---QGMIWS 1075
Query: 107 PGTS--GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
S G +L S D V ++L+ + H ++V+SV +S + ASGS+D
Sbjct: 1076 VAFSLDGTLLASASEDQTVKLWNLKTGECVHTLKGH-EKQVYSVAFSPNGQI-AASGSED 1133
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
T+++WD G CV T++ + +A+ V F P G L+A+G D+K +D++
Sbjct: 1134 TTVKLWD--ISTGSCVDTLKHGHT-AAIRSVAFSPDG-RLLASGSEDEKIQLWDMQ 1185
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
R V SV +S L +SG +D T+++WD + G+C + + + V V F P G
Sbjct: 775 REVHSVSFSPDGQTLASSG-EDSTVRLWDVKT--GQCWQIFEGHSKK--VYSVRFSPDGQ 829
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+L + G D+ +D+++ + V GH V I F D TL++ D +LW+V
Sbjct: 830 TLASCG-EDRSIKLWDIQRG-ECVNTLWGHSSQVWAIAFSPDGRTLISCSDDQTARLWDV 887
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ +G+ + V S +L G + + +++++ GE
Sbjct: 888 ITGNSLNILRGYTRDVYSVAFS--PDSQILASGRDDYTIGLWNLKTGE 933
>gi|395510165|ref|XP_003759351.1| PREDICTED: katanin p80 WD40-containing subunit B1-like, partial
[Sarcophilus harrisii]
Length = 228
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 20/197 (10%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L +GS G++++WD + K + T+ ++ +C ++FHP+G VA+G D
Sbjct: 20 LIVAGSQSGSIRVWD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKL 74
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+D+R+ V + GH + V +RF D L +A D +KLW++ +++ + GH
Sbjct: 75 WDIRRK-GCVFRYKGHTQAVRCLRFSPDGKWLASAADDHSVKLWDLTAGKMMSEFLGHTG 133
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
N V + LL GS + +D+ F+ V+ E G V S+ +
Sbjct: 134 PVNVVEFHPNEY--LLASGSADRTIRFWDLE--------KFQVVSCIEGEPGPVRSILF- 182
Query: 336 RVGEDECTLVAGGSDGL 352
D C L +G D L
Sbjct: 183 --NPDGCCLYSGCQDSL 197
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
T ++ +G G + +DLE + H + S+D+ + ASGS D ++
Sbjct: 16 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKAN-ICSLDFHPYGEFV-ASGSQDTNIK 73
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPV 226
+WD R G CV + AV C+ F P G L +A D +D+ KM+
Sbjct: 74 LWDIRRKG--CV--FRYKGHTQAVRCLRFSPDGKWLASAA-DDHSVKLWDLTAGKMMSEF 128
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGH 273
L GH V + F + L+ +G+ D ++ W++ +V+ +G
Sbjct: 129 L---GHTGPVNVVEFHPNEYLLASGSADRTIRFWDLEKFQVVSCIEGE 173
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH V +R + L+ AG+ G +++W++ ++++RT GH N L +
Sbjct: 2 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGH--KANICSLDFHPY 59
Query: 288 GGLLGCGSETNQVFVYDVR 306
G + GS+ + ++D+R
Sbjct: 60 GEFVASGSQDTNIKLWDIR 78
>gi|358055688|dbj|GAA98033.1| hypothetical protein E5Q_04713 [Mixia osmundae IAM 14324]
Length = 815
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 20/199 (10%)
Query: 129 EKKVPIFERDEHGGRR-----VWSVDYSKGDPVLG--ASGSDDGTMQMWDPRCDGGKCVS 181
+KK+ I+ DE R +W V K P G ASGS D ++ WDPR +C+
Sbjct: 237 DKKIKIWNFDEMREERMLEGHLWDVKCVKWHPTKGLLASGSKDRFVKFWDPRS--SQCLQ 294
Query: 182 TVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
T ++ V + ++P G++L A D YD+R M + + F GH+ VT + +
Sbjct: 295 TSH--MHKNTVSSMSWNPNGNTL-ATTSKDLTVKIYDIRAMKE-LQTFKGHKSEVTAVAW 350
Query: 242 LDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQ 299
V D L T DG + W V+D R Y + ++++ GL+ +G +L S +
Sbjct: 351 HPVHHDLLATGSYDGSIIQWTVDDP-APRDYLEYAHDQSVWGLAYHPNGHILASASNDHS 409
Query: 300 V-FVYDVRWGEPVWVHDFE 317
F R G P H+F+
Sbjct: 410 TRFWSRSRPGTP---HNFD 425
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLE-KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
SG L S D++G + + + +F+ E R V ++ D A+GSDD ++
Sbjct: 186 SGVWLVSADHNGTIKYFQTNMNNLQVFQAHEEPIR---DVTFAPNDARF-ATGSDDKKIK 241
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+W+ D + ++ V CV++HP L+A+G D+ +D R +
Sbjct: 242 IWN--FDEMREERMLE--GHLWDVKCVKWHP-TKGLLASGSKDRFVKFWDPRS-SQCLQT 295
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR- 286
H+ TV+ + + + +TL T D +K++++ + ++T+KGH ++ V W
Sbjct: 296 SHMHKNTVSSMSWNPNGNTLATTSKDLTVKIYDIRAMKELQTFKGH---KSEVTAVAWHP 352
Query: 287 -HGGLLGCGSETNQVFVYDV 305
H LL GS + + V
Sbjct: 353 VHHDLLATGSYDGSIIQWTV 372
>gi|392587559|gb|EIW76893.1| WD40 repeat-like protein, partial [Coniophora puteana RWD-64-598
SS2]
Length = 559
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 29/282 (10%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICT 96
P + + I I + P+ ++ ATG + +RI++ S +V D
Sbjct: 81 PFSGHTRGILAIAYSPNGTLLATGSLDSTVRIWDANS------------GRQVDDAIHGH 128
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVW-SVDYSKG 153
+++S+ + P G + SG DG V ++ + P E EH ++W SV +S
Sbjct: 129 TQRVNSVSYSP--DGTSVVSGSSDGTVRVWNAKDLTNTPA-EIIEHTEGQLWHSVKFSP- 184
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L A G +G +++W R K V ++ + V + P G+S +A GC D K
Sbjct: 185 DGQLIAGGGSNGKLKVWYAR---EKTVKYEYKGNIKAFIWAVAWAP-GTSRLATGCNDGK 240
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDG-CLKLWNVNDSRVIRT-YK 271
YD VL+ +GHR + +++ L+ +G+D ++LW+ +++ ++
Sbjct: 241 VRIYDPENPDVAVLLIEGHRGAINSVKYSPDGKLLASGSDDRTIRLWDAQTGTPVKSPFR 300
Query: 272 GHVNNRNFVGLSVWR-HGGLLGCGSETNQVFVYDVRWGEPVW 312
GH +N+V W G + GS V V+DV G+ ++
Sbjct: 301 GH---KNWVTSVRWAPEGTRIVSGSADKTVRVWDVSRGQAIF 339
>gi|312198300|ref|YP_004018361.1| hypothetical protein FraEuI1c_4498 [Frankia sp. EuI1c]
gi|311229636|gb|ADP82491.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
Length = 495
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 112/284 (39%), Gaps = 47/284 (16%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA-VVDHSKVCDYYICTPAKLSSLKWK 106
+ F P+ AT +R++++ + + A + +H+ +P
Sbjct: 197 VAFSPNGRTLATASRDATVRLWDVADPALPEQIAAPLTEHASSVGSVAFSP--------- 247
Query: 107 PGTSGRVLGSGDYDGVVMEYDL-----EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
GR L +G DG V +D+ ++ D G V SV +S P L +G
Sbjct: 248 ---DGRTLATGSDDGTVRLWDVADPSRPRRAASPLADHRGA--VLSVAFSPTQPTLATAG 302
Query: 162 SDDGTMQMWD------PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
+D T+++WD PR G V V F P G +L A G D+ +
Sbjct: 303 -EDATVRLWDVAVPSRPRLAAGPLTDHA------GGVSSVAFSPDGRTL-AGGGYDRTVW 354
Query: 216 AYDV------RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIR 268
+DV R+ P+ GH V + F D L A D + LWNV D R
Sbjct: 355 LWDVTDPSQPRRAAAPL----GHAGRVLSVAFSPDGHALAAASDDNAVWLWNVTDPARPR 410
Query: 269 TYKGHVNNRNFVGLSVW--RHGGLLGCGSETNQVFVYDVRWGEP 310
+ R LSV R G +L G++ + V+++D+ + P
Sbjct: 411 QISAPLAPRFGGALSVAFSRDGRILATGNDDSTVWLWDLTYPSP 454
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 38/254 (14%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + ++SP A ++ + F P+ AT G +R++++ + P +A
Sbjct: 264 WDVADPSRPRRAASPLADHRGAVLSVAFSPTQPTLATAGEDATVRLWDV--AVPSRPRLA 321
Query: 83 ---VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
+ DH+ +SS+ + P GR L G YD V +D+ P R
Sbjct: 322 AGPLTDHA----------GGVSSVAFSP--DGRTLAGGGYDRTVWLWDVTD--PSQPRRA 367
Query: 140 -----HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASR-SAVC 193
H G RV SV +S L A+ SDD + +W+ D + P A R
Sbjct: 368 AAPLGHAG-RVLSVAFSPDGHAL-AAASDDNAVWLWN-VTDPARPRQISAPLAPRFGGAL 424
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDV-----RKMVDPVLVFDGHRKTVTYIRF-LDVDTL 247
V F G ++A G D + +D+ ++ P+ GH + + F D TL
Sbjct: 425 SVAFSRDG-RILATGNDDSTVWLWDLTYPSPEQIASPLA---GHSAWLLSVAFSPDGHTL 480
Query: 248 VTAGTDGCLKLWNV 261
T D ++LW+V
Sbjct: 481 ATGSGDKTVRLWHV 494
>gi|428211896|ref|YP_007085040.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
gi|428000277|gb|AFY81120.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 553
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS+DGT+++W+ + G+ V + Q RS V + F P G+ L+A+G A+
Sbjct: 320 SGSEDGTVKIWNRQS--GELVRSFQ--GDRSFVRALAFSPDGT-LLASGSAEDTDIKLWN 374
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D + GHR V + F D LV+ TD +KLWN ++T G+ N
Sbjct: 375 PQTGDLIRTLTGHRDYVNTVAFTNDGQLLVSGSTDKTIKLWNPESGEAVQTLTGNAN--R 432
Query: 279 FVGLSVWRHGGLLGCGS-ETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
+ +G LL S E V V+++R GE +H RG V S+
Sbjct: 433 ITSVVTTPYGNLLAAASAEDGLVKVWNLRTGE--LLHTLT------GHRGTVYSIAIDPY 484
Query: 338 GEDECTLVAGGSDGLLHVF 356
G L +GG DG + ++
Sbjct: 485 GH---ILASGGIDGTIQIW 500
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L SGS D T+++W+P G+ V T+ +A+R + V P+G+ L AA D
Sbjct: 399 DGQLLVSGSTDKTIKLWNPES--GEAVQTLTGNANR--ITSVVTTPYGNLLAAASAEDGL 454
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWN------VNDSRV 266
+++R + + GHR TV I L + G DG +++WN V + V
Sbjct: 455 VKVWNLRTG-ELLHTLTGHRGTVYSIAIDPYGHILASGGIDGTIQIWNLYTGNRVRNLEV 513
Query: 267 IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
I + GH L+ R G L G++ +V ++ +
Sbjct: 514 INSGSGH--QSPVFSLAFSRDGQTLVSGADNGKVQLWQI 550
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV-GLS 283
+ GH VT + F D TLV+ DG +K+WN ++R+++G +R+FV L+
Sbjct: 296 IRTLTGHTDAVTALTFSPDGQTLVSGSEDGTVKIWNRQSGELVRSFQG---DRSFVRALA 352
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
G LL GS + D++ P +T R +V++V + G+
Sbjct: 353 FSPDGTLLASGSAEDT----DIKLWNPQTGDLIRTLTG---HRDYVNTVAFTNDGQ---L 402
Query: 344 LVAGGSD 350
LV+G +D
Sbjct: 403 LVSGSTD 409
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 100/253 (39%), Gaps = 38/253 (15%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYN------IKSVLVDHPVVAVVDHSKVCDYYIC 95
+D++ + F P +G ++I+N ++S D V + S
Sbjct: 303 TDAVTALTFSPDGQTLVSGSEDGTVKIWNRQSGELVRSFQGDRSFVRALAFSPDGTLLAS 362
Query: 96 TPAKLSSLK-WKPGTS---------------------GRVLGSGDYDGVVMEYDLEKKVP 133
A+ + +K W P T G++L SG D + ++ E
Sbjct: 363 GSAEDTDIKLWNPQTGDLIRTLTGHRDYVNTVAFTNDGQLLVSGSTDKTIKLWNPESGEA 422
Query: 134 IFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
+ + R+ SV + +L A+ ++DG +++W+ R G+ + T+ + R V
Sbjct: 423 V-QTLTGNANRITSVVTTPYGNLLAAASAEDGLVKVWNLRT--GELLHTL--TGHRGTVY 477
Query: 194 CVEFHPFGSSLVAAGCADK----KAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLV 248
+ P+G L + G Y + + ++ + GH+ V + F D TLV
Sbjct: 478 SIAIDPYGHILASGGIDGTIQIWNLYTGNRVRNLEVINSGSGHQSPVFSLAFSRDGQTLV 537
Query: 249 TAGTDGCLKLWNV 261
+ +G ++LW +
Sbjct: 538 SGADNGKVQLWQI 550
>gi|340721896|ref|XP_003399349.1| PREDICTED: katanin p80 WD40-containing subunit B1-like isoform 1
[Bombus terrestris]
gi|340721898|ref|XP_003399350.1| PREDICTED: katanin p80 WD40-containing subunit B1-like isoform 2
[Bombus terrestris]
gi|350407847|ref|XP_003488212.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Bombus
impatiens]
Length = 873
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRVL +G D V + + K+ I H + V + + + ++ A GS G +++
Sbjct: 30 SGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHT-TPIECVRFGQTEDLVCA-GSQTGALKI 87
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K T+ + ++ + C++FHP+G L+A+G D +D+R+ + +
Sbjct: 88 WD--LEHAKLARTL--TGHKAGIRCMDFHPYGE-LLASGSLDTAIKLWDIRRK-GCIFTY 141
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V ++F D + +AG +G +KLW++ R +R + H V H
Sbjct: 142 KGHNRMVNSLKFSPDGQWIASAGEEGMVKLWDLRAGRQLREFSEHRGPATTVEFHP--HE 199
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V +D+
Sbjct: 200 FLLASGSADRTVHFWDL 216
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 9/184 (4%)
Query: 84 VDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR 143
++H+K+ A + + + P G +L SG D + +D+ +K IF H R
Sbjct: 90 LEHAKLARTLTGHKAGIRCMDFHP--YGELLASGSLDTAIKLWDIRRKGCIFTYKGHN-R 146
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
V S+ +S D AS ++G +++WD R G+ + S R VEFHP
Sbjct: 147 MVNSLKFSP-DGQWIASAGEEGMVKLWDLR--AGRQLREF--SEHRGPATTVEFHPH-EF 200
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND 263
L+A+G AD+ + +D+ H + + F + AG LK++
Sbjct: 201 LLASGSADRTVHFWDLESFQLVSSTDQSHSSAIRCLYFSQGGECLFAGCHDVLKVYGWEP 260
Query: 264 SRVI 267
R +
Sbjct: 261 GRTL 264
>gi|434403900|ref|YP_007146785.1| WD40 repeat-containing protein [Cylindrospermum stagnale PCC 7417]
gi|428258155|gb|AFZ24105.1| WD40 repeat-containing protein [Cylindrospermum stagnale PCC 7417]
Length = 1717
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
RV S+ +S +L AS S D T+++W R G + T+ V V F P G S
Sbjct: 1490 RVTSISFSPDSRIL-ASASADKTIKLW--RIADGTLLQTL--IGHIDEVTTVSFSPDGKS 1544
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
L A+G AD + + M+ + F GH + ++F D TL +A D +KLWNV
Sbjct: 1545 L-ASGSADNTVKLWRIDGML--LKNFTGHNLAIASVKFSPDGKTLASASWDNTIKLWNVT 1601
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
++I T GH + GLS G +L GS N + +++ G
Sbjct: 1602 TGQLINTLAGHSD--GVTGLSFSPDGQILASGSADNTIKLWNTPTG 1645
Score = 45.4 bits (106), Expect = 0.042, Method: Composition-based stats.
Identities = 55/247 (22%), Positives = 102/247 (41%), Gaps = 35/247 (14%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D I + F + AT + I+++N ++ ++ + +++S
Sbjct: 1447 DIINAVIFSQNGKYLATASADKTIKVWNSQNF-------------QLIKIFTGHNNRVTS 1493
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEK----KVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+ + P + R+L S D + + + + I DE V +V +S L
Sbjct: 1494 ISFSPDS--RILASASADKTIKLWRIADGTLLQTLIGHIDE-----VTTVSFSPDGKSL- 1545
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAY 217
ASGS D T+++W R DG + + A+ V+F P G +L +A + K +
Sbjct: 1546 ASGSADNTVKLW--RIDG---MLLKNFTGHNLAIASVKFSPDGKTLASASWDNTIKLWNV 1600
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
++++ GH VT + F D L + D +KLWN +++T GH +
Sbjct: 1601 TTGQLIN---TLAGHSDGVTGLSFSPDGQILASGSADNTIKLWNTPTGTLLKTLLGHPHR 1657
Query: 277 RNFVGLS 283
N + S
Sbjct: 1658 VNSLSFS 1664
Score = 42.7 bits (99), Expect = 0.31, Method: Composition-based stats.
Identities = 57/277 (20%), Positives = 116/277 (41%), Gaps = 35/277 (12%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
F ++Q + E + + + N R S S +D + I F ++ A+ +
Sbjct: 1170 FLTNRQERQERQDNKEGGTFKTNSRLVKSLSEH-----TDIVTDISFSHDGNILASSSLD 1224
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
++++ I L++ + ++++ + P G+V+ SG D VV
Sbjct: 1225 HTVKLWRIDGTLINS--------------WNADNGWVNTVCFSP--DGQVIASGGEDNVV 1268
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
+ I H GR + + +S + AS S D T+++W+ GK + T+
Sbjct: 1269 KLWQASNGKLITSLVGHKGR-ITRIKFSPDGKYI-ASASGDKTIKLWNA---DGKLLQTL 1323
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-L 242
+ + + V + F P + +A+ AD + + + + GH + V + F
Sbjct: 1324 ESHSEQ--VNSISFSP-DNQFLASAAADNTIKLWRLNGSL--LATLKGHGEQVRDVSFSQ 1378
Query: 243 DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
D L +A D +KLW V ++ ++ +G+VN+ F
Sbjct: 1379 DGKILASASADKTIKLWQVPNNELL---EGNVNSVGF 1412
Score = 42.0 bits (97), Expect = 0.48, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASG +D +++W + GK ++++ R + ++F P G +A+ DK ++
Sbjct: 1260 ASGGEDNVVKLW--QASNGKLITSLVGHKGR--ITRIKFSPDGK-YIASASGDKTIKLWN 1314
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + + H + V I F D L +A D +KLW +N S ++ T KGH
Sbjct: 1315 ADGKL--LQTLESHSEQVNSISFSPDNQFLASAAADNTIKLWRLNGS-LLATLKGHGEQV 1371
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDV 305
V S + G +L S + ++ V
Sbjct: 1372 RDVSFS--QDGKILASASADKTIKLWQV 1397
>gi|183983394|ref|YP_001851685.1| putative regulatory protein [Mycobacterium marinum M]
gi|183176720|gb|ACC41830.1| conserved hypothetical regulatory protein [Mycobacterium marinum M]
Length = 1600
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 72/249 (28%), Positives = 104/249 (41%), Gaps = 28/249 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + F P A+G IR++N+ HP ++ ++
Sbjct: 1030 SAGVAEVAFSPDGHTLASGSHDGTIRLWNLTDPA--HP-------RRLGQPLQSHTGSVA 1080
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKV---PIFERDEHGGRRVWSVDYSKGDPVLG 158
S+ + P G L SG +DG + ++L P+ E V V +S L
Sbjct: 1081 SIAFNP--DGHTLASGSHDGTIQLWNLTDPAHPGPLGPPLEGHSASVAGVAFSPDGHTL- 1137
Query: 159 ASGSDDGTMQMW---DPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKA 214
ASGSDDGT+++W DP G P SA V V F P G++L A+G D
Sbjct: 1138 ASGSDDGTIRLWNLTDPAHPG----PLGPPLQGHSAGVASVAFGPDGNTL-ASGSVDDTV 1192
Query: 215 YAYDVRKMVDPVLV---FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTY 270
+DV P + GH TV I F D TL T DG ++LWN+N +R +
Sbjct: 1193 RLWDVTDPAQPGPLGQPLTGHHGTVWSIAFGPDGHTLTTGSHDGTIRLWNLNTVLPVRGH 1252
Query: 271 KGHVNNRNF 279
G V + F
Sbjct: 1253 TGPVRSAVF 1261
Score = 45.1 bits (105), Expect = 0.054, Method: Composition-based stats.
Identities = 76/330 (23%), Positives = 132/330 (40%), Gaps = 38/330 (11%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYIC 95
P + + S+ I F+P A+G I+++N+ P+ ++ HS
Sbjct: 1071 PLQSHTGSVASIAFNPDGHTLASGSHDGTIQLWNLTDPAHPGPLGPPLEGHS-------- 1122
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKV---PIFERDEHGGRRVWSVDYSK 152
A ++ + + P G L SG DG + ++L P+ + V SV +
Sbjct: 1123 --ASVAGVAFSP--DGHTLASGSDDGTIRLWNLTDPAHPGPLGPPLQGHSAGVASVAFGP 1178
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCAD 211
L ASGS D T+++WD D + QP + V + F P G +L G D
Sbjct: 1179 DGNTL-ASGSVDDTVRLWDV-TDPAQPGPLGQPLTGHHGTVWSIAFGPDGHTL-TTGSHD 1235
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRV 266
++ ++ VL GH V F DV TL + G D + LW++ + ++
Sbjct: 1236 GTIRLWN----LNTVLPVRGHTGPVRSAVFSPDVQTLASGGDDATIALWDLTNPGHPRQL 1291
Query: 267 IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSER 326
+ +GH + + S G L GS+ + ++D+ +P +P R
Sbjct: 1292 GQPLRGHSDTVQSLAFS--PDGHTLASGSDDATIALWDLT--DPT-----DPRQLGQPLR 1342
Query: 327 GFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
G +V D TL +G D + ++
Sbjct: 1343 GHSDTVQSLAFSPDGHTLASGSDDATIALW 1372
Score = 44.7 bits (104), Expect = 0.077, Method: Composition-based stats.
Identities = 87/356 (24%), Positives = 132/356 (37%), Gaps = 74/356 (20%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD P ++ I F P TG IR++N+ +VL
Sbjct: 1195 WDVTDPAQPGPLGQPLTGHHGTVWSIAFGPDGHTLTTGSHDGTIRLWNLNTVL------P 1248
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
V H+ + +P + L SG D + +DL P R
Sbjct: 1249 VRGHTGPVRSAVFSP------------DVQTLASGGDDATIALWDLTN--PGHPRQLGQP 1294
Query: 143 RR-----VWSVDYSKGDPVLGASGSDDGTMQMW------DPRCDGGKCVSTVQPSASRS- 190
R V S+ +S L ASGSDD T+ +W DPR G QP S
Sbjct: 1295 LRGHSDTVQSLAFSPDGHTL-ASGSDDATIALWDLTDPTDPRQLG-------QPLRGHSD 1346
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDV------RKMVDPVLVFDGHRKTVTYIRFL-D 243
V + F P G +L A+G D +D+ R++ P+ GH +TV + F D
Sbjct: 1347 TVQSLAFSPDGHTL-ASGSDDATIALWDLTNPGHPRQLGKPL---RGHTRTVQSLAFSPD 1402
Query: 244 VDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLLGCGSETNQVF 301
TL + D + LW++ D R + + +G++ G LL GS + V
Sbjct: 1403 GHTLASGSDDTTIALWDLTDPAHARQLGKPLYGYSSAVLGVAFSPDGRLLASGSGDDTVV 1462
Query: 302 VYDVR-------WGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
++++ G P+ H G+V+ V + G TL +G SD
Sbjct: 1463 LWNLTDPAHPSPLGHPLHGHS-----------GYVNRVAFSPDGH---TLASGSSD 1504
Score = 43.1 bits (100), Expect = 0.23, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKV---PIFERDEHGGRRVWSVDY 150
I T A ++++ P G L SG +G + ++L P+ + V S+ +
Sbjct: 935 IPTQAPVNTVAISP--DGHTLASGGENGNIQLWNLTDAAHPGPLGPPLQGHSAGVVSIAF 992
Query: 151 SKGDPVLGASGSDDGTMQMW---DPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVA 206
S L ASGSDDGT+++W DP G P SA V V F P G +L A
Sbjct: 993 SPDGHTL-ASGSDDGTIRLWNLTDPAHPG----PLDPPLEDHSAGVAEVAFSPDGHTL-A 1046
Query: 207 AGCADKKAYAYDVRKMVDPVLV---FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN 262
+G D +++ P + H +V I F D TL + DG ++LWN+
Sbjct: 1047 SGSHDGTIRLWNLTDPAHPRRLGQPLQSHTGSVASIAFNPDGHTLASGSHDGTIQLWNLT 1106
Query: 263 D 263
D
Sbjct: 1107 D 1107
>gi|332661895|ref|YP_004451364.1| WD40 repeat-containing protein [Haliscomenobacter hydrossis DSM
1100]
gi|332337392|gb|AEE54491.1| WD40 repeat-containing protein [Haliscomenobacter hydrossis DSM
1100]
Length = 598
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
LSS+ + P G+ L +G D +D+E + H V SV +S L A
Sbjct: 188 LSSVAFSP--DGKRLATGSSDHSAKIWDVESGKQVLSLKGHSSY-VSSVAFSPDGKRL-A 243
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+GSDD + ++WD + GK T+ S V V F P G L A G DK A +DV
Sbjct: 244 TGSDDKSAKIWD--VESGK--QTLSLEGHSSYVSSVAFSPDGKRL-ATGSGDKSAKIWDV 298
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
L +GH V + F D LVT D K+W+V + + + +GH + N
Sbjct: 299 ESG-KQTLSLEGHSDYVWSVAFSPDGKRLVTGSQDQSAKIWDVESGKQLLSLEGHRSAVN 357
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V S G L GS+ ++DV G+ V
Sbjct: 358 SVAFSP--DGKRLATGSDDQSAKIWDVESGKRV 388
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 107/269 (39%), Gaps = 26/269 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + F P ATG +I++++S V+++ HS +P
Sbjct: 185 SSYLSSVAFSPDGKRLATGSSDHSAKIWDVES---GKQVLSLKGHSSYVSSVAFSP---- 237
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G+ L +G D +D+E + H V SV +S L A+G
Sbjct: 238 --------DGKRLATGSDDKSAKIWDVESGKQTLSLEGHSSY-VSSVAFSPDGKRL-ATG 287
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D + ++WD + GK T+ V V F P G LV G D+ A +DV
Sbjct: 288 SGDKSAKIWD--VESGK--QTLSLEGHSDYVWSVAFSPDGKRLVT-GSQDQSAKIWDVES 342
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+L +GHR V + F D L T D K+W+V + + + +GH + V
Sbjct: 343 G-KQLLSLEGHRSAVNSVAFSPDGKRLATGSDDQSAKIWDVESGKRVLSLEGHRSAVKSV 401
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G L GS ++D+ G+
Sbjct: 402 AFSP--DGKRLATGSGDKSAKIWDLESGK 428
>gi|111224864|ref|YP_715658.1| hypothetical protein FRAAL5499 [Frankia alni ACN14a]
gi|111152396|emb|CAJ64132.1| hypothetical protein FRAAL5499 [Frankia alni ACN14a]
Length = 561
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 28/244 (11%)
Query: 31 VSSSSSPNAAV--------SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
V S+ P AA +D F P + A GGI +R++++ + P+V
Sbjct: 322 VRSARHPTAAAPLASFPAGTDRAWATAFTPDGARLAVGGIEGHLRVWDLDDLSAPRPIVD 381
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H + S RVL S D V+ + L++ + E G
Sbjct: 382 LPGHRGSVGAVVF-------------PSRRVLVSAGQDATVLMWRLDRDGALPEPVRLAG 428
Query: 143 R--RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
+ VW++ ++ +L A+GSD+ ++ +W V + A + + V F P
Sbjct: 429 QDGDVWALAFASAGRLL-AAGSDEASISLWRLEASDHPPVQVARIDAHQGRIRAVSFSPD 487
Query: 201 GSSLVAAGCADKKAYAYDVRK--MVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLK 257
G +L+A+G D +DVR+ + +P V VT + F D L +DGCL+
Sbjct: 488 G-TLLASGSDDNAVRVWDVRRPDLPNPAAVLSPAGGRVTSLAFSPRGDVLAAGSSDGCLR 546
Query: 258 LWNV 261
L++V
Sbjct: 547 LYHV 550
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 18/211 (8%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
R +VD +G L AS DGT+ + R P+ + A F P G+
Sbjct: 300 RAIAVDAHRG---LVASAGTDGTIVVRSARHPTAAAPLASFPAGTDRA-WATAFTPDGAR 355
Query: 204 LVAAGCADK-KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN 262
L G + + D P++ GHR +V + F LV+AG D + +W ++
Sbjct: 356 LAVGGIEGHLRVWDLDDLSAPRPIVDLPGHRGSVGAVVFPSRRVLVSAGQDATVLMWRLD 415
Query: 263 -DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA 321
D + + + + L+ G LL GS+ + ++ + D PV
Sbjct: 416 RDGALPEPVRLAGQDGDVWALAFASAGRLLAAGSDEASISLWRLE------ASDHPPVQV 469
Query: 322 A--GSERGFVSSVCWRRVGEDECTLVAGGSD 350
A + +G + +V + + TL+A GSD
Sbjct: 470 ARIDAHQGRIRAVSF----SPDGTLLASGSD 496
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 124/318 (38%), Gaps = 29/318 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
IG + F ++ TG + R++++++ V DH+ + L
Sbjct: 254 IGALAFTGDAALLVTGADDGRTRLWDVRNPTAPRRVAGFHDHTDWVRAIAVDAHR--GLV 311
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
GT G + VV G R W+ ++ L A G +
Sbjct: 312 ASAGTDGTI--------VVRSARHPTAAAPLASFPAGTDRAWATAFTPDGARL-AVGGIE 362
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK--- 221
G +++WD D V R +V V F P LV+AG D + + +
Sbjct: 363 GHLRVWD-LDDLSAPRPIVDLPGHRGSVGAVVF-PSRRVLVSAGQ-DATVLMWRLDRDGA 419
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNV--NDSRVIRTYKGHVNNRN 278
+ +PV + G V + F L+ AG+D + LW + +D ++ + +
Sbjct: 420 LPEPVRLA-GQDGDVWALAFASAGRLLAAGSDEASISLWRLEASDHPPVQVARIDAHQGR 478
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
+S G LL GS+ N V V+DVR P + ++ AG G V+S+ + G
Sbjct: 479 IRAVSFSPDGTLLASGSDDNAVRVWDVR--RPDLPNPAAVLSPAG---GRVTSLAFSPRG 533
Query: 339 EDECTLVAGGSDGLLHVF 356
+ L AG SDG L ++
Sbjct: 534 D---VLAAGSSDGCLRLY 548
>gi|343425265|emb|CBQ68801.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 861
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 111/252 (44%), Gaps = 24/252 (9%)
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSK-GDPVLGASGSDDG 165
G GR L SG D V ++ E G R RVW VD ++ G V ASG D
Sbjct: 533 GEEGRKLVSGSSDNTVRLWN--SNTGRCEGVLEGHRSRVWDVDSTRTGGHVASASG--DS 588
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++WD + +C +T++ A V FHP +VAAG DK YDV +
Sbjct: 589 TVKVWD--VESAQCRTTLR--AGMGDVYSCRFHPDEKHMVAAGY-DKLVRMYDV-ETGSI 642
Query: 226 VLVFDGHRKTVTYIRFLDVDTL-VTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
V F GH+ V+ F + L VTA D ++ W+V IRT GH+ + +
Sbjct: 643 VKTFTGHQLGVSSAIFNPLGNLIVTASKDTTIRFWDVVSGLCIRTITGHLG--EVTSVEI 700
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTL 344
G LL S+ N ++D+R P+ T+ + F+ R L
Sbjct: 701 NETGTLLLSSSKDNSNRLWDLRMLRPLKRFKGHQNTS----KNFI-----RSSFAHTSLL 751
Query: 345 VAGGSDGLLHVF 356
V G DGL++++
Sbjct: 752 VGGSEDGLIYMW 763
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 119 YDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKGDPV--LGASGSDDGTMQMWDPRC 174
YD +V YD+E V F + G V + +P+ L + S D T++ WD
Sbjct: 628 YDKLVRMYDVETGSIVKTFTGHQLG------VSSAIFNPLGNLIVTASKDTTIRFWD--V 679
Query: 175 DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRK 234
G C+ T+ + V VE + G+ L+ + D +D+R M+ P+ F GH+
Sbjct: 680 VSGLCIRTI--TGHLGEVTSVEINETGT-LLLSSSKDNSNRLWDLR-MLRPLKRFKGHQN 735
Query: 235 TV-TYIR--FLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
T +IR F LV DG + +W+ S V++T +GH
Sbjct: 736 TSKNFIRSSFAHTSLLVGGSEDGLIYMWDQESSEVLQTLEGH 777
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 25/133 (18%)
Query: 231 GHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW--- 285
GHRK V +RF+ + LV+ +D ++LWN N R +GH + VW
Sbjct: 521 GHRKNVKSVRFVGEEGRKLVSGSSDNTVRLWNSNTGRCEGVLEGHRSR-------VWDVD 573
Query: 286 --RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
R GG + S + V V+DV E + R + V R DE
Sbjct: 574 STRTGGHVASASGDSTVKVWDV-----------ESAQCRTTLRAGMGDVYSCRFHPDEKH 622
Query: 344 LVAGGSDGLLHVF 356
+VA G D L+ ++
Sbjct: 623 MVAAGYDKLVRMY 635
>gi|434394192|ref|YP_007129139.1| WD-40 repeat-containing protein [Gloeocapsa sp. PCC 7428]
gi|428266033|gb|AFZ31979.1| WD-40 repeat-containing protein [Gloeocapsa sp. PCC 7428]
Length = 1232
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 28/265 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P ++ ATG R +++++I + +V + ++ S+ + P
Sbjct: 690 LAFSPDGTILATGSDDRTVKLWDITT-------------GQVLQSFQGHTNRVESVNFNP 736
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G +L SG DG + +++ I + + V ++ +S D L ASG DDG +
Sbjct: 737 --QGTILASGSNDGSIRLWNVTSGQAI--QLTESAQPVRAIAFSV-DGALLASGGDDGNV 791
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+WD G C+ + V + F P +L A+G DK +D+
Sbjct: 792 TLWD--LTSGSCL---RLQGHTYLVQSLAFSPDRQTL-ASGSHDKTIKLWDLTTG-QCTK 844
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH V + F D TLV+ D LKLW+V + ++T G+ N V S
Sbjct: 845 TLQGHASRVWAVAFSPDGQTLVSGSDDRLLKLWDVETGKALKTLWGYTNLVRVVVFS--P 902
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPV 311
G LL GS V ++D+ G+ V
Sbjct: 903 DGTLLATGSSDRTVRLWDIHTGKVV 927
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 77/323 (23%), Positives = 138/323 (42%), Gaps = 42/323 (13%)
Query: 38 NAAVSDSIGVI---EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYI 94
N+A S++ G I + P + AT G A +IR++ + + P++ H +
Sbjct: 593 NSAFSENFGCILALTYSPDGEIIATAGEAGQIRLWRVADM---KPILTWKGHIRW----- 644
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
+ ++ + P G +L +G D V +D + + + VWS+ +S
Sbjct: 645 -----ILAVSFSP--DGTILATGSDDRTVKLWDAHTG-ELLQTLQGHASWVWSLAFSPDG 696
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
+L A+GSDD T+++WD G+ + + Q +R V V F+P G +++A+G D
Sbjct: 697 TIL-ATGSDDRTVKLWD--ITTGQVLQSFQGHTNR--VESVNFNPQG-TILASGSNDGSI 750
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
++V + + V I F +D L + G DG + LW++ +R +GH
Sbjct: 751 RLWNVTS--GQAIQLTESAQPVRAIAFSVDGALLASGGDDGNVTLWDLTSGSCLR-LQGH 807
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVC 333
+ S R L GS + ++D+ G+ + +G S V
Sbjct: 808 TYLVQSLAFSPDRQ--TLASGSHDKTIKLWDLTTGQ-----------CTKTLQGHASRVW 854
Query: 334 WRRVGEDECTLVAGGSDGLLHVF 356
D TLV+G D LL ++
Sbjct: 855 AVAFSPDGQTLVSGSDDRLLKLW 877
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VWSV + +L +SG D T+++WD G+C+ +Q + V V FHP G +
Sbjct: 1019 VWSVAFHPQGRILASSG--DVTVRLWD--VVTGECIKVLQ--GHTNGVWSVAFHPQGK-I 1071
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A+ D +DV + H V + F D + L +A D LKLW+V+
Sbjct: 1072 LASASDDYTVKLWDVDTGA-CLQTLQEHTNGVWSVAFSPDGNLLASASDDKTLKLWDVST 1130
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ ++T++GH + +S G LL G + ++ ++D+ GE
Sbjct: 1131 GKCLQTFQGHSD--RVTSVSFHPQGKLLASGEQEEKIKLWDLDTGE 1174
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 76/331 (22%), Positives = 122/331 (36%), Gaps = 80/331 (24%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A +++R WD + S ++ + + F+P ++ A+G IR++N+
Sbjct: 700 ATGSDDRTVKLWDITTGQVLQSFQGH----TNRVESVNFNPQGTILASGSNDGSIRLWNV 755
Query: 72 KS------VLVDHPVVAVV------------DHSKVCDYYICTPAKL---------SSLK 104
S PV A+ D V + + + + L SL
Sbjct: 756 TSGQAIQLTESAQPVRAIAFSVDGALLASGGDDGNVTLWDLTSGSCLRLQGHTYLVQSLA 815
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P + L SG +D + +DL H R VW+V +S L SGSDD
Sbjct: 816 FSPDR--QTLASGSHDKTIKLWDLTTGQCTKTLQGHASR-VWAVAFSPDGQTL-VSGSDD 871
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KM 222
+++WD + GK + T+ + V V F P G+ L+A G +D+ +D+ K+
Sbjct: 872 RLLKLWD--VETGKALKTLW--GYTNLVRVVVFSPDGT-LLATGSSDRTVRLWDIHTGKV 926
Query: 223 VDP-------------------------------------VLVFDGHRKTVTYIRFLDVD 245
V + GH V + F D
Sbjct: 927 VKAFQGHTRGILSTAFSHNGQILASASEKINLWNVATGKLIRTLQGHTNWVWSVAFHSQD 986
Query: 246 T-LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
L +A D +KLWNV R +RT GH N
Sbjct: 987 NILASASGDHTVKLWNVATGRCLRTLVGHTN 1017
>gi|17227934|ref|NP_484482.1| hypothetical protein all0438 [Nostoc sp. PCC 7120]
gi|17129783|dbj|BAB72396.1| serine/threonine kinase with WD-40 repeat [Nostoc sp. PCC 7120]
Length = 677
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 30/267 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + F P +GG I+I+N+K+ V + + HS +P
Sbjct: 436 SRKVNAVVFSPDGKTLVSGGDDNTIKIWNLKTGKV---IRTITGHSDAVHTLAISP---- 488
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
+G+ L SG D V ++L I + G W SV S D V A
Sbjct: 489 --------NGKTLVSGSDDNTVKVWNLNTGRLI---NTLTGHTFWVRSVAISP-DGVNIA 536
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++W+ + G T+ + + V + F+P G++L A+ D+ + V
Sbjct: 537 SGSFDKTVKIWN--LETGTLTHTL--AGNGETVTSIAFNPDGNTL-ASASRDRTIKIWKV 591
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V G +T+T I F D +TL +A D +KLWN+ + IRT +GH N
Sbjct: 592 GAGTR-VRTLKGSTETITSIAFSPDGNTLASASRDQTIKLWNLETGKEIRTLEGHENTVT 650
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDV 305
V + G L GS N + ++ +
Sbjct: 651 TVAFT--PDGANLVSGSGDNTMRIWRI 675
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
+A + P G + + G +D+ + + D + GH + V + F D TLV
Sbjct: 395 NAFVSLAISPNGQIIASCG-SDRTIKIWQLATGED-ISSLKGHSRKVNAVVFSPDGKTLV 452
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ G D +K+WN+ +VIRT GH + + + +S +G L GS+ N V V+++ G
Sbjct: 453 SGGDDNTIKIWNLKTGKVIRTITGHSDAVHTLAIS--PNGKTLVSGSDDNTVKVWNLNTG 510
Query: 309 EPV 311
+
Sbjct: 511 RLI 513
>gi|376003504|ref|ZP_09781314.1| Ser/Thr protein kinase [Arthrospira sp. PCC 8005]
gi|375328161|emb|CCE17067.1| Ser/Thr protein kinase [Arthrospira sp. PCC 8005]
Length = 704
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GRV+ SG D V +DL K I H R + ++ +S+ L ASGS D T+ +W
Sbjct: 475 GRVIASGSRDNTVKLWDLHSKQEIATLKGHE-RDITTIAFSRDGQTL-ASGSHDHTITLW 532
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV--RKMVDPVLV 228
+ + T++ + V F P G L+A+ D +D+ R+ + +L
Sbjct: 533 --YLGTNELIGTLR--GHNREIRAVAFSPNGR-LLASASQDNTVKLWDLNRREEISTLLS 587
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
D + + R D TL++ +D LKLW+V V+ T GH ++ ++V G
Sbjct: 588 HDNSVNAIAFSR--DGQTLISGSSDKTLKLWDVTTKEVMATLHGH--SQAIKSIAVSPDG 643
Query: 289 GLLGCGSETNQVFVYDVRWGEPV 311
++ G + + V ++D++ E +
Sbjct: 644 RIIASGGDDDTVQLWDLKNQEAI 666
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 20/199 (10%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGSDD T+++W + +ST+ + A+ + P G ++A+G D +D
Sbjct: 437 ASGSDDNTVRLWS--LQTFEHLSTL--TGHGGAINSIAISPDG-RVIASGSRDNTVKLWD 491
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + + GH + +T I F D TL + D + LW + + +I T +GH NR
Sbjct: 492 LHSKQE-IATLKGHERDITTIAFSRDGQTLASGSHDHTITLWYLGTNELIGTLRGH--NR 548
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
++ +G LL S+ N V ++D ++ E ++ S V+++ + R
Sbjct: 549 EIRAVAFSPNGRLLASASQDNTVKLWD--------LNRREEISTLLSHDNSVNAIAFSRD 600
Query: 338 GEDECTLVAGGSDGLLHVF 356
G+ TL++G SD L ++
Sbjct: 601 GQ---TLISGSSDKTLKLW 616
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG +D + + L I H R + +V +S +L AS S D T+++W
Sbjct: 517 GQTLASGSHDHTITLWYLGTNELIGTLRGHN-REIRAVAFSPNGRLL-ASASQDNTVKLW 574
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + + +ST+ + ++V + F G +L++ G +DK +DV + +
Sbjct: 575 D--LNRREEISTLL--SHDNSVNAIAFSRDGQTLIS-GSSDKTLKLWDVTTK-EVMATLH 628
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH + + I D + + G D ++LW++ + I T +G + + S R
Sbjct: 629 GHSQAIKSIAVSPDGRIIASGGDDDTVQLWDLKNQEAIATLRGPSSKIEAIAFSPKR--P 686
Query: 290 LLGCGSETNQVFVYDV 305
LL GS + ++ +
Sbjct: 687 LLVSGSHNRNLEIWQI 702
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+GR+L S D V +DL ++ I H V ++ +S+ L SGS D T+++
Sbjct: 558 NGRLLASASQDNTVKLWDLNRREEISTLLSHDN-SVNAIAFSRDGQTL-ISGSSDKTLKL 615
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + ++T+ A+ + P G ++A+G D +D++ + +
Sbjct: 616 WD--VTTKEVMATLH--GHSQAIKSIAVSPDG-RIIASGGDDDTVQLWDLKNQ-EAIATL 669
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
G + I F L+ +G+ + L++W + D
Sbjct: 670 RGPSSKIEAIAFSPKRPLLVSGSHNRNLEIWQIPD 704
>gi|158336629|ref|YP_001517803.1| WD-40 repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158306870|gb|ABW28487.1| WD-40 repeat protein [Acaryochloris marina MBIC11017]
Length = 1703
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 22/197 (11%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
K++SL + P +G+ L SG D + +D P+ H G SV P
Sbjct: 1484 GKINSLDFSP--NGKTLVSGSDDQTIRLWDATTGKPVKTIQAHDG----SVTSVSMGPRY 1537
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGSDD T+++W + DG V T+ + AV ++F+P G+ L +A ++
Sbjct: 1538 LASGSDDETVKLW--QLDGTP-VKTL--TGHGLAVSQIQFNPEGNLLASA------SWDN 1586
Query: 218 DVRKMVDPVLV--FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK--G 272
++ D LV GH+ VT + FL D LV+ D +K+W V+ R+I+T G
Sbjct: 1587 TIKLWRDGTLVQTLTGHQNGVTSLAFLPDQPILVSGSADQSVKVWQVDQGRLIKTLDGLG 1646
Query: 273 HVNNRNFVGLSVWRHGG 289
V N +G +W G
Sbjct: 1647 AVAQINLLGKQIWVSTG 1663
Score = 47.0 bits (110), Expect = 0.014, Method: Composition-based stats.
Identities = 86/352 (24%), Positives = 135/352 (38%), Gaps = 42/352 (11%)
Query: 15 TNERARCEWDFNLRTTVSSSSSPN--AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIK 72
T+ER R E T+VS SSS A+ SD V + S T + K+ ++
Sbjct: 1106 THERNRLESHTQRVTSVSISSSGQWIASGSDDQTVRIWQASGQHLHTLDLGEKVN--DVA 1163
Query: 73 SVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP-GT------SGRVLGSGDYDGVVME 125
D + + V + T +LSS P GT G L + + V+
Sbjct: 1164 FSPDDQSIAVITTQGTVQRWSPKTGKQLSSFAASPQGTGLAFHPQGHQLATAGRESVIKL 1223
Query: 126 YDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP 185
+D + H G W + D VL S S+D T+++WD G+ + T+
Sbjct: 1224 WDAGTGQLVKPLSGHQG---WVNAIALSDNVL-VSASEDKTVRIWD--VAKGQTLRTLPK 1277
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DV 244
A+ AV + P G +L AA D + + + + T + F D
Sbjct: 1278 QAT--AVTDIAISPDGQTL-AASMEDGTIQLWTLSGQL--LHTLKTKNVVATSVAFSPDG 1332
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
+TLV+A D L+LW V +++ T KGH + + + +G L S QV V
Sbjct: 1333 NTLVSAHADHSLRLWQVETGQLLSTLKGH--SAPTLDAAFHPNGKTLVSASVDKQVRV-- 1388
Query: 305 VRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
W P D P+ A V D+ L DG++ ++
Sbjct: 1389 --WATPSIPEDTSPILAMA-------------VSPDQQILATASLDGVIQLW 1425
>gi|443917587|gb|ELU38280.1| coatomer beta' subunit [Rhizoctonia solani AG-1 IA]
Length = 890
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 137/332 (41%), Gaps = 44/332 (13%)
Query: 38 NAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTP 97
N ++ D++ ++ P++ TG ++ IYN ++ S + +
Sbjct: 26 NVSLPDTLKSVDLHPTEPWLLTGLYNGQVNIYNTET-------------SALIKTFEVAE 72
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV- 156
+ +++ S V GS D+ Y+ +KV FE R SV PV
Sbjct: 73 VPVRCVRFITRKSWFVAGSDDFQLRAFNYNTHEKVAAFEA-HPDYIRCLSVH-----PVA 126
Query: 157 -LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
L +GSDD T++ WD G KCV V+ S + + +P + A+ C D+
Sbjct: 127 SLVLTGSDDMTIKAWD-WDKGWKCVQ-VRVSRHTHYIMNIAVNPKDPNTFASACLDRTVK 184
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+ + P D H K V Y+ + D +VT G D +K+W+ + I+T +G
Sbjct: 185 VWSLGNPT-PNFTLDAHEKGVNYVEYYHGADKPYIVTTGDDRTVKVWDYHAKSCIQTLEG 243
Query: 273 HVNNRNFVGLSVWRHGGL--LGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVS 330
H N +F H L + GSE V ++ + E + ER +
Sbjct: 244 HTANVSFAIF----HPLLPVIVSGSEDGTVKIWHAN------TYRLENTLSYSLERAWC- 292
Query: 331 SVCWRRVGEDECTLVAGGSDGLLHVFVGKKKP 362
V ++R D + G +G++ V +G+++P
Sbjct: 293 -VGYKRNSND---VAVGFDEGVVVVKLGREEP 320
>gi|145538919|ref|XP_001455154.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422953|emb|CAK87757.1| unnamed protein product [Paramecium tetraurelia]
Length = 1165
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 48/325 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++ + + F P+ S+ A+G + IR+++++S + + H +
Sbjct: 768 TNQVQSVSFSPNGSMLASGSWDQSIRLWDVES---GEQKLQLEGHD----------GTIY 814
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G L SG D + + + I + H V SV +S +L ASG
Sbjct: 815 SVSFSP--DGTKLASGGSDISIRLWQINTGKQILKIRSHSNC-VNSVCFSTDGSML-ASG 870
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD ++ +WD + + + R V V F P G++L A+G DK +DV+
Sbjct: 871 SDDNSICLWDFNENQQR----FKLVGHRKEVISVCFSPNGNTL-ASGSNDKSICLWDVKT 925
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
V +GH + + F D +TL + D ++LWN + +I+ GH + V
Sbjct: 926 GKQKA-VLNGHTSNIQSVCFSPDSNTLASGSNDFSVRLWNAKNGELIQQLNGHTSYVQSV 984
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S G LL GS + + +++ E+ + SV + D
Sbjct: 985 --SFCSCGTLLASGSRDHSIRLWNF-------------------EKNTIYSVSF---SYD 1020
Query: 341 ECTLVAGGSDGLLHVFVGKKKPLSA 365
T+ +GG+D +H++ K + L A
Sbjct: 1021 CLTIASGGNDNSIHLWDVKTEQLKA 1045
Score = 57.8 bits (138), Expect = 9e-06, Method: Composition-based stats.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 59/291 (20%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
++ SG D ++ +D++ I + + H V SV++S +L ASGS D +++WD
Sbjct: 656 LITSGSADNSIILWDVKIGQQIQKLEGHTNW-VQSVNFSPNGFLL-ASGSLDKDIRLWDV 713
Query: 173 RCDGGK-----------CVS-----TVQPSAS----------------------RSAVCC 194
R K CVS T+ S+S + V
Sbjct: 714 RTKQQKNELEGHDGTVYCVSFSIDGTLLASSSADNSIRLWDVKTGQQKFKLDGHTNQVQS 773
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTD 253
V F P G S++A+G D+ +DV + L +GH T+ + F D L + G+D
Sbjct: 774 VSFSPNG-SMLASGSWDQSIRLWDVESG-EQKLQLEGHDGTIYSVSFSPDGTKLASGGSD 831
Query: 254 GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV 313
++LW +N + I + H N N V S G +L GS+ N + ++D +
Sbjct: 832 ISIRLWQINTGKQILKIRSHSNCVNSVCFST--DGSMLASGSDDNSICLWDFNENQ---- 885
Query: 314 HDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG---LLHVFVGKKK 361
F+ V R V SVC+ G TL +G +D L V GK+K
Sbjct: 886 QRFKLV----GHRKEVISVCFSPNGN---TLASGSNDKSICLWDVKTGKQK 929
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 85/367 (23%), Positives = 139/367 (37%), Gaps = 72/367 (19%)
Query: 19 ARCEWDFNLRTTVSSSSSPNAAVSDSIGVI---EFDPSDSVFATGGIARKIRIYNIKSVL 75
A WD ++R S + G I F P + A+GG IR++ I +
Sbjct: 784 ASGSWDQSIRLWDVESGEQKLQLEGHDGTIYSVSFSPDGTKLASGGSDISIRLWQINT-- 841
Query: 76 VDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF 135
++ + HS C +C T G +L SG D + +D + F
Sbjct: 842 -GKQILKIRSHSN-CVNSVCF-----------STDGSMLASGSDDNSICLWDFNENQQRF 888
Query: 136 ERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCV 195
+ H + V SV +S L ASGS+D ++ +WD + K V S +S VC
Sbjct: 889 KLVGHR-KEVISVCFSPNGNTL-ASGSNDKSICLWDVKTGKQKAVLNGHTSNIQS-VC-- 943
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT--- 252
F P S+ +A+G D ++ + + + +GH V + F TL+ +G+
Sbjct: 944 -FSP-DSNTLASGSNDFSVRLWNAKNG-ELIQQLNGHTSYVQSVSFCSCGTLLASGSRDH 1000
Query: 253 -----------------------------DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
D + LW+V ++ +GH + V S
Sbjct: 1001 SIRLWNFEKNTIYSVSFSYDCLTIASGGNDNSIHLWDVKTEQLKANLQGHNDAVRSVCFS 1060
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
G L GS+ + ++D++ G+ + V G V SVC+ G T
Sbjct: 1061 A--DGTKLASGSDDKTICLWDIKTGQ-------QQVKLEG-HCSTVYSVCFSADG----T 1106
Query: 344 LVAGGSD 350
+A GSD
Sbjct: 1107 KLASGSD 1113
>gi|428297095|ref|YP_007135401.1| WD-40 repeat-containing protein [Calothrix sp. PCC 6303]
gi|428233639|gb|AFY99428.1| WD-40 repeat-containing protein [Calothrix sp. PCC 6303]
Length = 1242
Score = 65.1 bits (157), Expect = 6e-08, Method: Composition-based stats.
Identities = 68/299 (22%), Positives = 133/299 (44%), Gaps = 41/299 (13%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYICTPAKLSS 102
SI + F P A+G IR+ + ++ H + +++ H+ +P
Sbjct: 602 SIHSVAFSPDGHCLASGDFNGDIRLSDART----HQLQSILSGHTNWVQAVTFSP----- 652
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
G+ L S +DG V +DL + +H + V++V +S +L ASGS
Sbjct: 653 -------DGQTLASASFDGTVRLWDLNTGACLKILTDHT-QGVYTVAFSPDGKIL-ASGS 703
Query: 163 DDGTMQMWDPRCDGGKCVSTVQ--PSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
DD ++++W+ + G+C++++Q V + F P G ++ ++G A + + ++
Sbjct: 704 DDCSLRIWN--VNSGECLNSLQYEDGIKPHDVKSMAFSPDGQTIASSGSA-QTIVIWQIQ 760
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ + H+ V + F D L + D +KLW+V+ + +RT+ GH N
Sbjct: 761 NGI-CCQTLESHQGWVWSLAFSPDGKFLASGSDDATVKLWDVSTGKCLRTFVGHKNELRS 819
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV----------WVHDFEP---VTAAGSE 325
+ S G +L S+ + + ++D++ G V W F+P + A+G E
Sbjct: 820 IAFS--HDGEILISSSKDHTIRLWDIQTGACVKTLIGHENWIWAMAFDPTYQIIASGGE 876
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L SG D + + + + EH V SV +S P + AS S D ++ W
Sbjct: 1009 GQILASGSTDHTIRLWHVSTGQCLHVLAEHM-HWVMSVAFS-CQPNILASASFDRMIKFW 1066
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLV 228
+ + G+C+ST Q S +C + +P G L+A+G +++ +DV K + +L
Sbjct: 1067 NVQT--GECISTWQVGQS---ICSIALNP-GGDLLASGSIEREVKLWDVATGKCLQTLL- 1119
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
GH V + F D +L + D ++LW++N ++ +GH N
Sbjct: 1120 --GHTHFVWSVAFSPDGRSLASGSFDRTIRLWDLNTGECLKVLQGHEN 1165
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 20/235 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+ + + F P + A+G +RI+N+ S + + D K P +
Sbjct: 684 TQGVYTVAFSPDGKILASGSDDCSLRIWNVNSGECLNS-LQYEDGIK--------PHDVK 734
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ + S ++ + ++ + + H G VWS+ +S L ASG
Sbjct: 735 SMAFSP--DGQTIASSGSAQTIVIWQIQNGICCQTLESHQG-WVWSLAFSPDGKFL-ASG 790
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD T+++WD GKC+ T ++ + + F G L+++ D +D++
Sbjct: 791 SDDATVKLWD--VSTGKCLRTF--VGHKNELRSIAFSHDGEILISSS-KDHTIRLWDIQT 845
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
V GH + + F + + G D ++LW+++ + +R +G+ N
Sbjct: 846 GA-CVKTLIGHENWIWAMAFDPTYQIIASGGEDRTIRLWSLSTGQCLRVLQGYTN 899
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 12/266 (4%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I + FDP+ + A+GG R IR++++ + V+ ++ ++ P S++
Sbjct: 859 IWAMAFDPTYQIIASGGEDRTIRLWSLSTGQCLR-VLQGYTNTLYSIAFVPMPKSTESIE 917
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
P +L SG +D +V ++++ V R R +V G + G GS D
Sbjct: 918 PNPAHLPVLLASGYFDQIVRIWNIQDCVYSGFRGHTDAIRAVAVS-PDGQLLAGGGGSAD 976
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W G C + + + S + + F G ++A+G D + V
Sbjct: 977 PTIKIWS--VVDGLCFNNL--AGHSSEIWSLVFSADG-QILASGSTDHTIRLWHV-STGQ 1030
Query: 225 PVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ V H V + F + L +A D +K WNV I T++ ++ ++
Sbjct: 1031 CLHVLAEHMHWVMSVAFSCQPNILASASFDRMIKFWNVQTGECISTWQ---VGQSICSIA 1087
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGE 309
+ G LL GS +V ++DV G+
Sbjct: 1088 LNPGGDLLASGSIEREVKLWDVATGK 1113
>gi|159476554|ref|XP_001696376.1| U5 snRNP-specific protein [Chlamydomonas reinhardtii]
gi|158282601|gb|EDP08353.1| U5 snRNP-specific protein [Chlamydomonas reinhardtii]
Length = 330
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 31/240 (12%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
T G L S D +D E PI + EH +G V +G+DD T++
Sbjct: 86 TDGEALLSCSADKTARCWDAETGAPIKKMGEHTAVVNSCCPLRRGAKVF-VTGADDSTVK 144
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM----VD 224
+WD R K V T++ S VC V F G + + G D +D+R+ V+
Sbjct: 145 VWDMRVK--KSVHTLR---SEFPVCAVAFADAGDQVYSGG-VDNAIKVWDLRRGGGADVE 198
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--R 277
P ++ GH +VT +R D L++ D L+ W+V +R + + GH++N +
Sbjct: 199 PSMLLKGHSDSVTGLRVSPDGGHLLSNAMDNTLREWDVRPYAPPNRCTKVFTGHMHNFEK 258
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW-------------VHDFEPVTAAGS 324
N + G + CGS V+++D + ++ H EP+ A+ S
Sbjct: 259 NLLRCDYAADGSKVACGSADRMVYIWDTSTRKLLYKLPGHSGSVNEVVFHSKEPIVASAS 318
>gi|303274727|ref|XP_003056679.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461031|gb|EEH58324.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 293
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 87/194 (44%), Gaps = 27/194 (13%)
Query: 151 SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA 210
++GDP++ SGSDDGT ++WD R V+ R V V F +S V G
Sbjct: 95 TRGDPLV-ISGSDDGTAKLWDLRRK-----HAVRTFPHRFQVTAVAFSK-DASQVYTGGV 147
Query: 211 DKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV----NDSR 265
D AYDVRK P L GH T+T I D ++T D L++W+V + R
Sbjct: 148 DNVLRAYDVRKEDAPYLTLPGHTDTITGIATSPDGTHVLTNAMDCTLRMWDVQPYASGDR 207
Query: 266 VIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW----------- 312
++ + GH +N + + S G + GS VFV+DV V+
Sbjct: 208 CVKYFTGHSHNFEKTLLRCSWSADGTRVSAGSSCANVFVWDVDSRRVVYKLPGHGGTVGE 267
Query: 313 --VHDFEPVTAAGS 324
H EPV A+GS
Sbjct: 268 VAFHPKEPVIASGS 281
>gi|428224287|ref|YP_007108384.1| WD40 repeat, subgroup [Geitlerinema sp. PCC 7407]
gi|427984188|gb|AFY65332.1| WD40 repeat, subgroup [Geitlerinema sp. PCC 7407]
Length = 490
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
++ I F P V A+ R I +++ S + + ++
Sbjct: 247 AVSAIAFSPDGGVLASASFDRNIGLWDAAS-------------GAGLGSWEAHMGSVRAI 293
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P G+VL SG +DG V ++ + + H G V S+ +S+ L +SG +
Sbjct: 294 AFSP--DGQVLVSGGFDGTVSFWEWQTGAQLHSHLGHTGS-VRSLVFSRDGQTLFSSG-E 349
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRK 221
DG +Q WD + G+C+STV A + HP ++A+G +D K ++ D +
Sbjct: 350 DGLIQQWD--VETGECISTV--GEDVGAAPAIALHP-NRPILASGSSDHTVKLWSLDDQP 404
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+ P +GH VT I F D + LV+A TDG L+LW+++
Sbjct: 405 NLAP---LEGHTAPVTAIAFSSDGEFLVSASTDGTLRLWHLD 443
>gi|427718396|ref|YP_007066390.1| serine/threonine protein kinase with WD40 repeats [Calothrix sp.
PCC 7507]
gi|427350832|gb|AFY33556.1| serine/threonine protein kinase with WD40 repeats [Calothrix sp.
PCC 7507]
Length = 661
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 133/319 (41%), Gaps = 41/319 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P A+G R I+++N+ +V + + HS+ +P
Sbjct: 374 VNSVAFAPDGITLASGSDDRTIKLWNLATV---KQIRTLTGHSRWVWAIAFSP------- 423
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G+ L SG D + +++ I H + + SV +S L ASGS D
Sbjct: 424 -----DGKTLASGSADKTIKLWNIATGKEIRTLVGHS-QGIASVTFSPDGKTL-ASGSLD 476
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W+ G + T++ AV + F P G +L A+G DKK +++ +
Sbjct: 477 KKIKLWN--LATGTEIRTLE--GHSQAVAAISFSPDGKTL-ASGSWDKKIKLWNLATGKE 531
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL- 282
+ +GH V + F D L + D +KLWN+ IRT KGH + N V
Sbjct: 532 -IRTLEGHSGLVLAVAFSPDGINLASGSKDKTIKLWNLVTGEAIRTLKGHTDKVNSVAYL 590
Query: 283 ----SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
+L GS N V ++++ G + + + G++ SV V
Sbjct: 591 PKSGDNKNQNTILISGSNDNTVKLWNLETG--------KEIRTLKRDSGYIYSVA---VS 639
Query: 339 EDECTLVAGGS-DGLLHVF 356
D T+ +GGS D ++ ++
Sbjct: 640 ADGKTIASGGSADNIIKIW 658
>gi|328773648|gb|EGF83685.1| hypothetical protein BATDEDRAFT_85199 [Batrachochytrium
dendrobatidis JAM81]
Length = 607
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV--L 157
+ ++K+ P S L SG YD VV YD+E+ V H SV +P+ L
Sbjct: 404 MYTVKYHPTHS--FLVSGGYDKVVRLYDIERGVAAKTFTGHQ----LSVSKVIFNPLGNL 457
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
SGS D T++ WD G C+ T+ S+ V CVE + G+ L+ + D +
Sbjct: 458 IISGSKDNTIKFWD--IVSGLCIKTI--SSHLGEVTCVEMNSDGT-LLLSSSKDNSNRLW 512
Query: 218 DVRKMVDPVLVFDGHRKTV-TYIR--FLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
D+R M+ P+ F GH+ T +IR FL +V DG + LW+ + +++ +GH
Sbjct: 513 DIR-MLRPIRKFKGHQNTSKNFIRASFLGNSLIVGGSEDGAVHLWDRDKGDLLQRLRGH 570
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 53/242 (21%)
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGT 166
G G+ + SG D + E V + + H R +W V + G+ V ASG D T
Sbjct: 324 GEDGKQIVSGSSDNTCRVWHTETGVQMGILEGHTSR-IWDVTSTLNGNYVASASG--DST 380
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++W G C+ST+ S + V++HP S LV+ G DK YD+ + V
Sbjct: 381 IKVWSINDSGMPCLSTL--SGGSGDMYTVKYHPTHSFLVSGGY-DKVVRLYDIERGV-AA 436
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGT---------------------------------D 253
F GH+ +V+ + F + L+ +G+ D
Sbjct: 437 KTFTGHQLSVSKVIFNPLGNLIISGSKDNTIKFWDIVSGLCIKTISSHLGEVTCVEMNSD 496
Query: 254 GCL----------KLWNVNDSRVIRTYKGHVN-NRNFVGLSVWRHGGLLGCGSETNQVFV 302
G L +LW++ R IR +KGH N ++NF+ S + ++G GSE V +
Sbjct: 497 GTLLLSSSKDNSNRLWDIRMLRPIRKFKGHQNTSKNFIRASFLGNSLIVG-GSEDGAVHL 555
Query: 303 YD 304
+D
Sbjct: 556 WD 557
>gi|218440184|ref|YP_002378513.1| hypothetical protein PCC7424_3245 [Cyanothece sp. PCC 7424]
gi|218172912|gb|ACK71645.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
Length = 947
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+SS+ + P G+ L SG D ++ +D+ KK+ + + V+SV +S +
Sbjct: 380 ISSVSFSP--DGKALVSGSDDNTIILWDVMTGKKLKTLKGHQDS---VFSVSFSPDGKTV 434
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+ +WD GK + T++ ++ V V F P G +L A+G DK +
Sbjct: 435 -ASGSRDNTIILWDVMT--GKKLKTLK--GHQNWVWSVSFSPDGKTL-ASGSVDKTIILW 488
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D+ + + GH + + F D TL +A D +KLW++ + T KGH N
Sbjct: 489 DIARG-KSLKTLRGHEDKIFSVSFSPDGKTLASASADNTIKLWDIASENRVITLKGHQNW 547
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V S G L GS N + ++DV G +
Sbjct: 548 VMSVSFS--PDGKTLASGSNDNTIKLWDVVTGNEI 580
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 94 ICTPAKLSSLK------WKPGTS--GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRV 145
+ T KL +LK W S G+ L SG D ++ +D+ + + H + +
Sbjct: 448 VMTGKKLKTLKGHQNWVWSVSFSPDGKTLASGSVDKTIILWDIARGKSLKTLRGHEDK-I 506
Query: 146 WSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
+SV +S L AS S D T+++WD + + ++ V V F P G +L
Sbjct: 507 FSVSFSPDGKTL-ASASADNTIKLWDIASEN----RVITLKGHQNWVMSVSFSPDGKTL- 560
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDS 264
A+G D +DV + + F GH+ V ++ D TL ++ D + LW++ +
Sbjct: 561 ASGSNDNTIKLWDVV-TGNEIKTFSGHQHLVWSVKISPDGKTLASSSWDKNIILWDMTTN 619
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ I+T+ H + + V +S G +L GS + ++D+ G+ +
Sbjct: 620 KEIKTFSKHQDLVSSVSIS--PAGKILASGSNDKSIILWDITTGKQL 664
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 126/297 (42%), Gaps = 31/297 (10%)
Query: 19 ARCEWDFNL---RTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL 75
A WD N+ T + + D + + P+ + A+G + I +++I +
Sbjct: 603 ASSSWDKNIILWDMTTNKEIKTFSKHQDLVSSVSISPAGKILASGSNDKSIILWDITT-- 660
Query: 76 VDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF 135
+ + H K Y + K G++L SG D ++ +++ P+
Sbjct: 661 -GKQLNTLKGHQKAI--YSLSFNK----------DGKILASGSDDHRIILWNVTTGKPLK 707
Query: 136 ERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCV 195
H V+S+ S +L ASG++ + +WD GK + + + + + + +
Sbjct: 708 ILKGHQ-EAVYSISLSPDGKIL-ASGTNKNII-LWD--VTTGKPIKSFKEN--KEIIYSI 760
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DG 254
P G + A +K +DV + +GH++ V + + + ++ +G+ D
Sbjct: 761 SLSPDGK--ILASGTNKNIILWDVT-TGKKLGTLEGHQELVFSLSWSEDRKILASGSYDN 817
Query: 255 CLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
LKLW++ + ++T KGH + N V S G + GS V ++D+ G+P+
Sbjct: 818 TLKLWDIATRKELKTLKGHQSVINSVSFS--PDGKTVASGSADKTVKLWDIDTGKPL 872
>gi|340054206|emb|CCC48501.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 691
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 130/354 (36%), Gaps = 89/354 (25%)
Query: 78 HPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVP--IF 135
HP + +K+ A ++S + G + SGD ++Y + K I
Sbjct: 356 HPFKPMTSANKILTSTPIHSAAVTSATFTTGGGALLTASGDKTANFLKYPVAKHGGDGIL 415
Query: 136 ERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGG--------KCVSTVQPSA 187
R S P++ A+GS DGT+ +W P K V TV+
Sbjct: 416 MRVHTAPVNTIDTSMSIKSPIV-ATGSADGTVAVWRPTSRASPYIVHAVHKDVRTVKFFY 474
Query: 188 SRSAVCC--------------------------------VEFHP--------------FG 201
+ +CC VEF P F
Sbjct: 475 TDKFLCCACGNAVSLYKYALDDGGGDIDRTRNESRMRSVVEFTPPDTQHVVAVDAINYFT 534
Query: 202 SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLD-----------VDTLVTA 250
S+++ ++K YDV V + H + + ++ L + T +TA
Sbjct: 535 SNIIVWAGSNKAVGVYDVAAERFTVTMAQAHERPIHHVAMLTAGRYASAGVGPLHTFLTA 594
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
G D ++LW+V R +R + H N+ VG++ +G L+ GSE V++YDV
Sbjct: 595 GMDNTVRLWDVRQQRSVRHFAQHRNSAAPVGVAFSPNGALVAAGSENRSVYLYDVG---- 650
Query: 311 VWVHDFEPVTAAGSERGFVS----SVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
T+A ++ VS S+CW + E L G + G + F+G++
Sbjct: 651 ---------TSAVLDKLAVSDVPTSICWHPI---ENVLAVGAASGAVQ-FMGQR 691
>gi|440753797|ref|ZP_20932999.1| WD domain, G-beta repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440174003|gb|ELP53372.1| WD domain, G-beta repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 1000
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 24/230 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P+ +G + I+++N+++ + + H D Y LSS+
Sbjct: 721 VNSVNFSPNGKTLVSGSWDKTIKLWNVET---GQEIRTLKGH----DSY------LSSVN 767
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G+ L SG D + +++E I H V SV++S L SGS D
Sbjct: 768 FSP--DGKTLVSGSQDNTIKLWNVETGTEIRTLTGHDSY-VNSVNFSPDGKTL-VSGSLD 823
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W+ + GK + T++ ++V V F P G +LV+ G DK ++V +
Sbjct: 824 NTIKLWN--VETGKEIRTLK--GHDNSVISVNFSPNGKTLVS-GSFDKTIKLWNVETGTE 878
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ G V + F D TLV++ D +KLWN + + IRT KGH
Sbjct: 879 -IRTLKGDDWFVKSVNFSPDGKTLVSSSNDNTIKLWNGSTGQEIRTLKGH 927
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 142/313 (45%), Gaps = 39/313 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P +G I+++N+K+ + + H+ +++ S+ + P
Sbjct: 640 VSFSPDGKTLVSGSWDGTIKLWNVKT---GKEIRTLKGHN----------SRVGSVNFSP 686
Query: 108 GTSGRVLGS-GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
+G+ L S G YD + + +++E I H G V SV++S L SGS D T
Sbjct: 687 --NGKTLVSDGVYDTIKL-WNVETGQEIRTLTGHNGP-VNSVNFSPNGKTL-VSGSWDKT 741
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++W+ + G+ + T++ S + V F P G +LV+ G D ++V + +
Sbjct: 742 IKLWN--VETGQEIRTLK--GHDSYLSSVNFSPDGKTLVS-GSQDNTIKLWNVETGTE-I 795
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
GH V + F D TLV+ D +KLWNV + IRT KGH N+ V S
Sbjct: 796 RTLTGHDSYVNSVNFSPDGKTLVSGSLDNTIKLWNVETGKEIRTLKGHDNSVISVNFS-- 853
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
+G L GS + +++V G E T G + FV SV + G+ TLV
Sbjct: 854 PNGKTLVSGSFDKTIKLWNVETGT-------EIRTLKGDD-WFVKSVNFSPDGK---TLV 902
Query: 346 AGGSDGLLHVFVG 358
+ +D + ++ G
Sbjct: 903 SSSNDNTIKLWNG 915
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 24/229 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+G + F P+ + G+ I+++N+++ + + H+ ++S+
Sbjct: 679 VGSVNFSPNGKTLVSDGVYDTIKLWNVET---GQEIRTLTGHN----------GPVNSVN 725
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P +G+ L SG +D + +++E I H + SV++S L SGS D
Sbjct: 726 FSP--NGKTLVSGSWDKTIKLWNVETGQEIRTLKGHDS-YLSSVNFSPDGKTL-VSGSQD 781
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W+ + G + T+ + S V V F P G +LV +G D ++V +
Sbjct: 782 NTIKLWN--VETGTEIRTL--TGHDSYVNSVNFSPDGKTLV-SGSLDNTIKLWNV-ETGK 835
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+ GH +V + F + TLV+ D +KLWNV IRT KG
Sbjct: 836 EIRTLKGHDNSVISVNFSPNGKTLVSGSFDKTIKLWNVETGTEIRTLKG 884
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V V F P G +LV+ G D ++V + + GH VT + F D TLV+
Sbjct: 595 VTSVNFSPDGKTLVS-GSWDNTIKLWNV-ETGKEIRTLKGHDNWVTSVSFSPDGKTLVSG 652
Query: 251 GTDGCLKLWNVNDSRVIRTYKGH 273
DG +KLWNV + IRT KGH
Sbjct: 653 SWDGTIKLWNVKTGKEIRTLKGH 675
>gi|428315619|ref|YP_007113501.1| serine/threonine protein kinase with WD40 repeats [Oscillatoria
nigro-viridis PCC 7112]
gi|428239299|gb|AFZ05085.1| serine/threonine protein kinase with WD40 repeats [Oscillatoria
nigro-viridis PCC 7112]
Length = 623
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 19/231 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G V+ SG D + + +E I H V++V +S +L AS S D T+++
Sbjct: 350 NGEVVASGSDDKTIKLWRVEDGQEIVTLTGHANS-VYTVAFSPDGQML-ASSSHDKTVKL 407
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W R G+ + T++ ++V F P G ++A+ D+ + V+ + +
Sbjct: 408 W--RMKDGQEIRTLR--GHINSVYGAAFSPDGE-IIASSSWDQTIKIWRVKDGQE-IRTL 461
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V ++ F D +TL ++ D +K+W V D ++IRT GH ++ V S +G
Sbjct: 462 AGHINLVYFVAFSPDGETLASSSWDRTVKIWRVKDGKLIRTLTGHTDSVRCVAFS--PNG 519
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
L GS N + ++ WV D++ V +V S+ + GE
Sbjct: 520 EFLASGSHDNTIKIW--------WVKDWQEVLTIAGHSWYVDSIAFSPDGE 562
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 10/194 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G ++ S +D + + ++ I H V+ V +S L AS S D T+++W
Sbjct: 435 GEIIASSSWDQTIKIWRVKDGQEIRTLAGHINL-VYFVAFSPDGETL-ASSSWDRTVKIW 492
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
R GK + T+ + +V CV F P G L A+G D + V+ + VL
Sbjct: 493 --RVKDGKLIRTL--TGHTDSVRCVAFSPNGEFL-ASGSHDNTIKIWWVKDWQE-VLTIA 546
Query: 231 GHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
GH V I F ++ + ++ +K+W V D + + GH N+ V S G
Sbjct: 547 GHSWYVDSIAFSPDGEIMASSSNQTIKIWRVKDGQELCNIGGHNNSVYSVNFS--PEGEF 604
Query: 291 LGCGSETNQVFVYD 304
L GS + ++
Sbjct: 605 LASGSSDKTIKIWQ 618
>gi|301121923|ref|XP_002908688.1| WD domain-containing protein [Phytophthora infestans T30-4]
gi|262099450|gb|EEY57502.1| WD domain-containing protein [Phytophthora infestans T30-4]
Length = 354
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L A+GS D +++WD R G+ V+ + A + V V+FHP SL+ G D
Sbjct: 164 LVATGSHDENVRLWDVR--NGRTVAII--GAHQEPVVSVQFHPTDGSLLVTGGYDGLVRV 219
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
+DV + V RF V + T DG ++LW+ +RTY GHVN
Sbjct: 220 WDVASRQCLRSIVTDPAAPVGSARFTPNGRYVLSATLDGTVRLWDYMRDICVRTYSGHVN 279
Query: 276 NRNFVGLSV----WRHGGLLGCGSETNQVFVYDV 305
+ + + W ++ CGSE ++VF++DV
Sbjct: 280 RKFSMQCAFLEQQWNQQPVVACGSEDSRVFMWDV 313
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 25/219 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F+P S+ ATG +R+++++ + VA++ + + S++
Sbjct: 153 VSCVAFNPQGSLVATGSHDENVRLWDVR----NGRTVAIIGAHQ---------EPVVSVQ 199
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSD 163
+ P T G +L +G YDG+V +D+ + + V S ++ G VL A+
Sbjct: 200 FHP-TDGSLLVTGGYDGLVRVWDVASRQCLRSIVTDPAAPVGSARFTPNGRYVLSATL-- 256
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASR--SAVCC-VEFHPFGSSLVAAGCADKKAYAYDV- 219
DGT+++WD D CV T +R S C +E +VA G D + + +DV
Sbjct: 257 DGTVRLWDYMRD--ICVRTYSGHVNRKFSMQCAFLEQQWNQQPVVACGSEDSRVFMWDVD 314
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKL 258
+ V VL GH V + L+ +G++ +K+
Sbjct: 315 TQNVSSVLT--GHDHPVLALAAHPTSALMVSGSNRDIKI 351
>gi|427727694|ref|YP_007073931.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
gi|427363613|gb|AFY46334.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
Length = 1821
Score = 64.7 bits (156), Expect = 6e-08, Method: Composition-based stats.
Identities = 70/298 (23%), Positives = 123/298 (41%), Gaps = 30/298 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SDS+ + + P A+ I+I++I + V HS+ ++
Sbjct: 1369 SDSVYSVAYSPDGKYLASASSDNTIKIWDIST---GKAVQTFQGHSR----------DVN 1415
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L S D + +D+ + H V SV YS L AS
Sbjct: 1416 SVAYSP--DGKHLASASLDNTIKIWDISTGKTVQTLQGHSSA-VMSVAYSPDGKHL-ASA 1471
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD GK V T+Q V V + P S +A+ D +D+
Sbjct: 1472 SADNTIKIWD--ISTGKVVQTLQ--GHSRVVYSVAYSP-DSKYLASASGDNTIKIWDI-S 1525
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
V GH V + + D L +A +D +K+W+++ + ++T +GH +R
Sbjct: 1526 TGKTVQTLQGHSSVVISVAYSPDGKYLASASSDNTIKIWDISTGKAVQTLQGH--SRGVY 1583
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV---HDFEPVTAAGSERG-FVSSVCW 334
++ L S N + ++D+ + V H E ++ A S G +++S W
Sbjct: 1584 SVAYSPDSKYLASASSDNTIKIWDLSTDKAVQTLQGHSSEVISVAYSPDGKYLASASW 1641
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V+SV YS L AS S D T+++W+ GK V T+Q RS V V + P S
Sbjct: 1288 VYSVAYSPDGKYL-ASASSDNTIKIWESST--GKAVQTLQ--GHRSVVYSVAYSP-DSKY 1341
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A+ D +D+ V GH +V + + D L +A +D +K+W+++
Sbjct: 1342 LASASWDNTIKIWDL-STGKVVQTLQGHSDSVYSVAYSPDGKYLASASSDNTIKIWDIST 1400
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ ++T++GH + N V S G L S N + ++D+ G+ V
Sbjct: 1401 GKAVQTFQGHSRDVNSVAYS--PDGKHLASASLDNTIKIWDISTGKTV 1446
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 26/259 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ + P A+ I+I++I + V + HS V + S+ + P
Sbjct: 1501 VAYSPDSKYLASASGDNTIKIWDIST---GKTVQTLQGHSSV----------VISVAYSP 1547
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L S D + +D+ + H R V+SV YS L AS S D T+
Sbjct: 1548 --DGKYLASASSDNTIKIWDISTGKAVQTLQGHS-RGVYSVAYSPDSKYL-ASASSDNTI 1603
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD D K V T+Q +S V V + P G L +A D +D+ V
Sbjct: 1604 KIWDLSTD--KAVQTLQGHSSE--VISVAYSPDGKYLASASW-DNTIKIWDI-STSKAVQ 1657
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
H V + + D L A + +K+W+++ + ++T +GH +R + ++
Sbjct: 1658 TLQDHSSLVMSVAYSPDGKYLAAASRNSTIKIWDISTGKAVQTLQGH--SREVMSVAYSP 1715
Query: 287 HGGLLGCGSETNQVFVYDV 305
+G L S N + ++D+
Sbjct: 1716 NGKYLASASSDNTIKIWDL 1734
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P + + L S +D + +DL + H V+SV YS L AS
Sbjct: 1332 SVAYSPDS--KYLASASWDNTIKIWDLSTGKVVQTLQGHSDS-VYSVAYSPDGKYL-ASA 1387
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD GK V T Q SR V V + P G L +A D +D+
Sbjct: 1388 SSDNTIKIWD--ISTGKAVQTFQ-GHSRD-VNSVAYSPDGKHLASASL-DNTIKIWDI-S 1441
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
V GH V + + D L +A D +K+W+++ +V++T +GH +R
Sbjct: 1442 TGKTVQTLQGHSSAVMSVAYSPDGKHLASASADNTIKIWDISTGKVVQTLQGH--SRVVY 1499
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ L S N + ++D+ G+ V
Sbjct: 1500 SVAYSPDSKYLASASGDNTIKIWDISTGKTV 1530
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 119 YDGVVMEYDLEKKVPIFERDEHGGR--RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDG 176
Y V ++ +K+ FE + G V SV YS L AS SDD T+++W+
Sbjct: 1176 YQAVYLKPGEKKQNRSFEVNTLKGHSGEVISVAYSPDGKYL-ASVSDDNTIKIWESST-- 1232
Query: 177 GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVFDGHRKT 235
GK V T+Q SAV V + P G L +A + K + K+V GH
Sbjct: 1233 GKAVQTLQ--GHSSAVYSVAYSPDGKYLASASDDNTIKIWESSTGKVVQ---TLQGHSSA 1287
Query: 236 VTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
V + + D L +A +D +K+W + + ++T +GH + V S L
Sbjct: 1288 VYSVAYSPDGKYLASASSDNTIKIWESSTGKAVQTLQGHRSVVYSVAYS--PDSKYLASA 1345
Query: 295 SETNQVFVYDVRWGEPV 311
S N + ++D+ G+ V
Sbjct: 1346 SWDNTIKIWDLSTGKVV 1362
Score = 46.6 bits (109), Expect = 0.019, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 28/255 (10%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + TV + ++ V + + P A+ I+I++I + V
Sbjct: 1522 WDISTGKTVQTLQGHSSVVIS----VAYSPDGKYLASASSDNTIKIWDIST---GKAVQT 1574
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ HS+ + S+ + P + + L S D + +DL + H
Sbjct: 1575 LQGHSR----------GVYSVAYSPDS--KYLASASSDNTIKIWDLSTDKAVQTLQGHSS 1622
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V SV YS L AS S D T+++WD K V T+Q +S V V + P G
Sbjct: 1623 E-VISVAYSPDGKYL-ASASWDNTIKIWD--ISTSKAVQTLQDHSS--LVMSVAYSPDGK 1676
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
L AA + +D+ V GH + V + + + L +A +D +K+W++
Sbjct: 1677 YLAAAS-RNSTIKIWDI-STGKAVQTLQGHSREVMSVAYSPNGKYLASASSDNTIKIWDL 1734
Query: 262 NDSRVIRTYKGHVNN 276
+ ++R+ +NN
Sbjct: 1735 DVDNLLRSGCDLLNN 1749
>gi|428212971|ref|YP_007086115.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
gi|428001352|gb|AFY82195.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 1612
Score = 64.7 bits (156), Expect = 7e-08, Method: Composition-based stats.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 45/322 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D + + F P ATGG + + +N L+D +V H +
Sbjct: 1125 DRVNSVAFSPDGKFLATGGSEKTVYRWNTSGTLIDQ----LVGHEGWAEIAF-------- 1172
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+S L SG DG+V +D K + + R V S+ +S D L A+G
Sbjct: 1173 ------SSNGHLASGGDDGIVSIWDSSGK--LLQELYLNNREVNSLGFSP-DGKLLATGG 1223
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DDGT ++WD GK + ++ + V V F P G L+A G +D A +D
Sbjct: 1224 DDGTARIWD--ISSGKQLQELK--GHQGPVYLVRFSPDG-RLLATGGSDGTACIWDTS-- 1276
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ + F GH+ V + F D L+T+G ++W+++ +++ N +G
Sbjct: 1277 ANQLAKFLGHQGGVKNMAFSPDNRFLITSGYQSTARVWDIS---ALQSDTLQANQDLILG 1333
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
++ G LL + V ++D + F+ ++ +VSSV + G
Sbjct: 1334 VAFSYDGNLLATAGQHGNVRIWD---SSGSLLKKFQ------GDKDWVSSVAFSPDGR-- 1382
Query: 342 CTLVAGGSDGLLHVFVGKKKPL 363
L GG DG++ ++ PL
Sbjct: 1383 --LATGGDDGIVRIWDSSGNPL 1402
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 79/299 (26%), Positives = 124/299 (41%), Gaps = 37/299 (12%)
Query: 54 DSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRV 113
D FATGG RI+N + L+ + K DY +++ + + P G +
Sbjct: 1006 DGRFATGGDDGMARIWNTEGKLLQE----LKASEKGQDY---GSQEVNRVAFNP--EGTL 1056
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L + DG +D E K+ + G V V +S D L A+G DGT ++WD
Sbjct: 1057 LATAADDGTARLWDTEGKLVATLKGHKG--PVIRVIFSP-DGKLLATGGTDGTAKLWDTE 1113
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR-KMVDPVLVFDGH 232
GK V+T++ R V V F P G L A G ++K Y ++ ++D ++ +G
Sbjct: 1114 ---GKLVATLKGHKDR--VNSVAFSPDGKFL-ATGGSEKTVYRWNTSGTLIDQLVGHEGW 1167
Query: 233 RKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
+ I F L + G DG + +W+ + + Y +NNR L G LL
Sbjct: 1168 AE----IAFSSNGHLASGGDDGIVSIWDSSGKLLQELY---LNNREVNSLGFSPDGKLLA 1220
Query: 293 CGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
G + ++D+ G+ + +G V R D L GGSDG
Sbjct: 1221 TGGDDGTARIWDISSGKQL-----------QELKGHQGPVYLVRFSPDGRLLATGGSDG 1268
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 47/283 (16%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVP-IFERDEHGGRRVWSVDYSKGDPV 156
A+++SL+ + ++L + V+ + DLEKKV + + G V ++ ++G +
Sbjct: 945 ARIASLQ-----AQKLLNKSFWQRVLPQIDLEKKVTETLYQLTYAGLEVNRLENTQGK-I 998
Query: 157 LG---------ASGSDDGTMQMWDPRCDGGKCVSTVQPSAS-----RSAVCCVEFHPFGS 202
L A+G DDG ++W+ GK + ++ S V V F+P G+
Sbjct: 999 LALAVSPDGRFATGGDDGMARIWNTE---GKLLQELKASEKGQDYGSQEVNRVAFNPEGT 1055
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
L+A D A +D + V GH+ V + F D L T GTDG KLW+
Sbjct: 1056 -LLATAADDGTARLWDTEGKL--VATLKGHKGPVIRVIFSPDGKLLATGGTDGTAKLWD- 1111
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA 321
+ +++ T KGH + N V S G L G V+ RW T+
Sbjct: 1112 TEGKLVATLKGHKDRVNSVAFS--PDGKFLATGGSEKTVY----RWN-----------TS 1154
Query: 322 AGSERGFVSSVCWRRVG-EDECTLVAGGSDGLLHVFVGKKKPL 363
V W + L +GG DG++ ++ K L
Sbjct: 1155 GTLIDQLVGHEGWAEIAFSSNGHLASGGDDGIVSIWDSSGKLL 1197
Score = 42.4 bits (98), Expect = 0.38, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 19/197 (9%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A+G DDG +++WD G + ++ + V V F G +A G D +D
Sbjct: 1384 ATGGDDGIVRIWD---SSGNPLKELKKQEGK--VNSVAFSHDGR--LATGGDDGIVRIWD 1436
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+P+ GH V + F L T G DG ++W+ + +++ GH
Sbjct: 1437 SSG--NPLKELKGHEVRVNTVAFSADGRLATGGDDGKFRIWD-SSGNLLKEITGHQGRVR 1493
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
V S G LL E + + + W + D P+ G V S+ +
Sbjct: 1494 SVAFS--PEGNLLVTAGEYSTIRL----WNTSKLLVDTNPLATLKRHEGEVFSIAF---S 1544
Query: 339 EDECTLVAGGSDGLLHV 355
+ LV+GG DG + V
Sbjct: 1545 PKDSFLVSGGVDGTVRV 1561
>gi|392587133|gb|EIW76468.1| coatomer protein [Coniophora puteana RWD-64-598 SS2]
Length = 867
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 24/241 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + +F P++ TG + IYN H A+V +V P +
Sbjct: 13 SDRVKGTDFHPTEPWLLTGLYNGTVNIYN-------HETGAIVKSFEVS----TVPVR-- 59
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+K+ P + V GS D+ V Y+ +KV FE R + + VL +G
Sbjct: 60 CVKFIPRKNWFVAGSDDFQLRVFNYNTHEKVGAFEAHPDYIRCL--TVHPTASIVL--TG 115
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD T++ WD + KC+ + + + F+P ++ A+ C D+ + +
Sbjct: 116 SDDMTIKAWDWEKNW-KCIQVYE--GHTHYIMNLTFNPKDANTFASACLDRTVKMWSLTS 172
Query: 222 MVDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D H K V Y+ F D LVT G D +K+W+ ++T +GH NN +
Sbjct: 173 P-NANFTMDAHDKGVNYVDFYPGADRPYLVTTGDDKTIKVWDYLSKSCVQTMEGHTNNPS 231
Query: 279 F 279
F
Sbjct: 232 F 232
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+GSDD +++++ P R C+ HP +S+V G D A+D
Sbjct: 72 AGSDDFQLRVFNYNTHEKVGAFEAHPDYIR----CLTVHP-TASIVLTGSDDMTIKAWDW 126
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
K + V++GH + + F D +T +A D +K+W++ T H
Sbjct: 127 EKNWKCIQVYEGHTHYIMNLTFNPKDANTFASACLDRTVKMWSLTSPNANFTMDAHDKGV 186
Query: 278 NFV 280
N+V
Sbjct: 187 NYV 189
>gi|443477045|ref|ZP_21066918.1| WD-40 repeat-containing protein [Pseudanabaena biceps PCC 7429]
gi|443017884|gb|ELS32234.1| WD-40 repeat-containing protein [Pseudanabaena biceps PCC 7429]
Length = 1596
Score = 64.7 bits (156), Expect = 7e-08, Method: Composition-based stats.
Identities = 73/302 (24%), Positives = 123/302 (40%), Gaps = 65/302 (21%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ I + F P A+G I+++N+K + + HSK+ +P
Sbjct: 1287 SNIITRVAFSPDGKTIASGSADHTIKLWNLK----EKEPQTLTGHSKIVMKVAFSP---- 1338
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLE-KKVPIFERDEHGGR----------------- 143
G+ + SG YD + ++L +K+ D + G
Sbjct: 1339 --------DGKTIASGSYDSTIKLWNLAGEKLRTLRVDNNFGTVAFSPDGKTIASDGYKH 1390
Query: 144 --RVWSVDYSKGDPVLG-----------------ASGSDDGTMQMWDPRCDGGKCVSTVQ 184
++W++ K + G SGS D T+++WD GK + T+
Sbjct: 1391 TIKLWNLAGKKLRTLTGHSNAVGSVAFSPDGKTIVSGSYDHTIKLWDLE---GKELRTL- 1446
Query: 185 PSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-D 243
+ S V V F P G ++V +G D +++ V L GHR V + F D
Sbjct: 1447 -TEHSSMVMSVAFSPDGKTIV-SGSDDNTIKLWNLEGKVLRTLT--GHRNWVGSVAFSPD 1502
Query: 244 VDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
T+V+ +D +KLWN+ + +V+RT GH N N V S G + GS N + ++
Sbjct: 1503 GKTIVSGSSDNTIKLWNL-EGKVLRTLTGHSNWVNSVAFS--PDGKTIASGSSDNTIKLW 1559
Query: 304 DV 305
D+
Sbjct: 1560 DI 1561
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 28/223 (12%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
V ++ G + F P A+ G I+++N L + + HS +
Sbjct: 1367 VDNNFGTVAFSPDGKTIASDGYKHTIKLWN----LAGKKLRTLTGHSNA----------V 1412
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S+ + P G+ + SG YD + +DLE K + EH V SV +S + S
Sbjct: 1413 GSVAFSP--DGKTIVSGSYDHTIKLWDLEGK-ELRTLTEHSS-MVMSVAFSPDGKTI-VS 1467
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDD T+++W+ GK + T+ + R+ V V F P G ++V +G +D +++
Sbjct: 1468 GSDDNTIKLWNLE---GKVLRTL--TGHRNWVGSVAFSPDGKTIV-SGSSDNTIKLWNLE 1521
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
V L GH V + F D T+ + +D +KLW+++
Sbjct: 1522 GKVLRTLT--GHSNWVNSVAFSPDGKTIASGSSDNTIKLWDID 1562
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 29/233 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + + F P + A+G I+++N++ + + HS + +P
Sbjct: 1123 SNWVESVAFSPDGKIIASGSSDLTIKLWNLEG----KELRTLTGHSNIVMKVAFSP---- 1174
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G+ + SG D + +DL K + H VWSV +S + ASG
Sbjct: 1175 --------DGKTIVSGSDDKTIKLWDLAGK-ELRTLTGH-SNEVWSVAFSPDGKTI-ASG 1223
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D T+++WD GK + T+ + + V V F P G ++A+G D +D++
Sbjct: 1224 SNDKTIKLWDL---AGKELRTL--TGHSNGVWSVAFSPDG-KIIASGSRDHTIKLWDLKG 1277
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ GH +T + F D T+ + D +KLWN+ + +T GH
Sbjct: 1278 --KEIQTLTGHSNIITRVAFSPDGKTIASGSADHTIKLWNLKEKEP-QTLTGH 1327
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P A+G + I+++N++ + ++ H + S+
Sbjct: 1043 SVTSVAFSPDGKTIASGSNDKTIKLWNLEG----KELRTLIGHRN----------GVWSV 1088
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASG 161
+ P G+++ SG D + ++LE K E G W SV +S ++ ASG
Sbjct: 1089 AFSP--DGKIIASGSSDYTIKLWNLEGK----ELQTLTGHSNWVESVAFSPDGKII-ASG 1141
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ GK + T+ + + V V F P G ++V +G DK +D+
Sbjct: 1142 SSDLTIKLWNLE---GKELRTL--TGHSNIVMKVAFSPDGKTIV-SGSDDKTIKLWDLAG 1195
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ GH V + F D T+ + D +KLW++ + +RT GH N V
Sbjct: 1196 --KELRTLTGHSNEVWSVAFSPDGKTIASGSNDKTIKLWDLA-GKELRTLTGHSNGVWSV 1252
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G ++ GS + + ++D++ E
Sbjct: 1253 AFS--PDGKIIASGSRDHTIKLWDLKGKE 1279
Score = 54.7 bits (130), Expect = 7e-05, Method: Composition-based stats.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 35/266 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+G I+++N++ + + HS + +P
Sbjct: 1088 VAFSPDGKIIASGSSDYTIKLWNLEG----KELQTLTGHSNWVESVAFSP---------- 1133
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR--VWSVDYSKGDPVLGASGSDDG 165
G+++ SG D + ++LE K E G V V +S + SGSDD
Sbjct: 1134 --DGKIIASGSSDLTIKLWNLEGK----ELRTLTGHSNIVMKVAFSPDGKTI-VSGSDDK 1186
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++WD GK + T+ + + V V F P G + +A+G DK +D+
Sbjct: 1187 TIKLWDL---AGKELRTL--TGHSNEVWSVAFSPDGKT-IASGSNDKTIKLWDLAG--KE 1238
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ GH V + F ++ +G+ D +KLW++ + I+T GH N V S
Sbjct: 1239 LRTLTGHSNGVWSVAFSPDGKIIASGSRDHTIKLWDLK-GKEIQTLTGHSNIITRVAFS- 1296
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEP 310
G + GS + + +++++ EP
Sbjct: 1297 -PDGKTIASGSADHTIKLWNLKEKEP 1321
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 67/265 (25%), Positives = 112/265 (42%), Gaps = 47/265 (17%)
Query: 123 VMEYDLEKKVPIFERDEHGGRRVWSVDYS-------------------KGDPVLGASGSD 163
+ + D+ K VP + +D GR +W V Y+ D ASGS+
Sbjct: 1003 IFDPDIRKIVPSYIKDRTLGR-LWEVIYNIREANRLEGHNKSVTSVAFSPDGKTIASGSN 1061
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++W+ GK + T+ R+ V V F P G ++A+G +D +++
Sbjct: 1062 DKTIKLWNLE---GKELRTL--IGHRNGVWSVAFSPDG-KIIASGSSDYTIKLWNLEG-- 1113
Query: 224 DPVLVFDGHRKTVTYIRFLDVDTLVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ GH V + F ++ +G +D +KLWN+ + + +RT GH N V
Sbjct: 1114 KELQTLTGHSNWVESVAFSPDGKIIASGSSDLTIKLWNL-EGKELRTLTGHSNIVMKVAF 1172
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGE---------PVWVHDFEP---VTAAGSERGFVS 330
S G + GS+ + ++D+ E VW F P A+GS +
Sbjct: 1173 S--PDGKTIVSGSDDKTIKLWDLAGKELRTLTGHSNEVWSVAFSPDGKTIASGSNDKTIK 1230
Query: 331 SVCWRRVGEDECTLVAGGSDGLLHV 355
W G++ TL G S+G+ V
Sbjct: 1231 --LWDLAGKELRTL-TGHSNGVWSV 1252
>gi|9759081|dbj|BAB09559.1| unnamed protein product [Arabidopsis thaliana]
Length = 932
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
VL A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G D
Sbjct: 82 VLVAAGAASGTIKLWD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLK 136
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D+RK + + GH + V +RF D +V+ G D +K+W++ +++ +K H
Sbjct: 137 IWDIRKK-GCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 195
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
L H LL GS V +D + FE + + G E
Sbjct: 196 G--QIQSLDFHPHEFLLATGSADRTVKFWD--------LETFELIGSGGPE 236
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK-----MVDPVLV----FDGHRKTVT 237
A +AV C++ S ++ G D K + + K + VLV GH +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILVSSRVLVCCQSLYGHSSGID 73
Query: 238 YIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
+ F + LV AG G +KLW++ +++++RT GH N + + G GS
Sbjct: 74 SVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSL 131
Query: 297 TNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHV 355
+ ++D+R + +H + +G V R D +V+GG D ++ V
Sbjct: 132 DTNLKIWDIR--KKGCIHTY---------KGHTRGVNVLRFTPDGRWVVSGGEDNIVKV 179
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P FA+G + ++I++I+ H H++ + TP
Sbjct: 117 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIH---TYKGHTRGVNVLRFTP---------- 163
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D +V +DL + E H G ++ S+D+ + +L A+GS D T+
Sbjct: 164 --DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG-QIQSLDFHPHEFLL-ATGSADRTV 219
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+ WD + + + + P + V C+ F+P G +++ K +++ +P+
Sbjct: 220 KFWD--LETFELIGSGGPET--AGVRCLSFNPDGKTVLCGLQESLKIFSW------EPIR 269
Query: 228 VFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTY 270
DG V + R D++ L + C+ +W V+ S + Y
Sbjct: 270 CHDG--VDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSVFLSPY 315
>gi|254413890|ref|ZP_05027659.1| protein kinase domain [Coleofasciculus chthonoplastes PCC 7420]
gi|196179487|gb|EDX74482.1| protein kinase domain [Coleofasciculus chthonoplastes PCC 7420]
Length = 619
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 49/308 (15%)
Query: 19 ARCEWDFNLRTTVSSS---SSPNAAV------------------SDSIGVIEFDPSDSVF 57
A+ D +L T++ S +SPN +V S SI I F P +
Sbjct: 293 AQILQDLHLTQTLAQSLSVASPNPSVKPNTLTPTWQCVRTLRGHSSSIHAIAFHPDGQIL 352
Query: 58 ATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSG 117
A+GG R +++++++S + P HS + D +P G+ L SG
Sbjct: 353 ASGGADRSVKLWHLESGI---PSCTFSGHSSLIDTIAFSP------------DGQFLVSG 397
Query: 118 DYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRC-DG 176
+D + ++L + +H G + SV +S D L ASGS D T+ +W+ D
Sbjct: 398 SWDHTIKLWELTTQTLKHTLKQHSG-WIKSVAFSS-DGQLLASGSADKTINIWNLNLQDI 455
Query: 177 GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV 236
K + S + + P G ++A+G AD+ +++ + L GH V
Sbjct: 456 QKTL-----DGHSSMIHTIVISPDG-QILASGSADRTIKLWNLATG-EIQLTLHGHTDAV 508
Query: 237 TYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
+ F L+ +G+ D +++WN+ ++ T H + + V +S G LL GS
Sbjct: 509 NSLAFSPSGQLLISGSADATIQVWNLKTGDILLTLTEHTDAVHSVAISA--KGRLLISGS 566
Query: 296 ETNQVFVY 303
V ++
Sbjct: 567 ADGTVRLW 574
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L SG D V + LE +P H + ++ +S L SGS D T+++W
Sbjct: 349 GQILASGGADRSVKLWHLESGIPSCTFSGHSSL-IDTIAFSPDGQFL-VSGSWDHTIKLW 406
Query: 171 DPRCDGGKCVSTVQPSASRSA--VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+ T++ + + + + V F G L+A+G ADK +++ + D
Sbjct: 407 E------LTTQTLKHTLKQHSGWIKSVAFSSDGQ-LLASGSADKTINIWNL-NLQDIQKT 458
Query: 229 FDGHRKTV-TYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
DGH + T + D L + D +KLWN+ + T GH + N + S
Sbjct: 459 LDGHSSMIHTIVISPDGQILASGSADRTIKLWNLATGEIQLTLHGHTDAVNSLAFS--PS 516
Query: 288 GGLLGCGSETNQVFVYDVRWGE 309
G LL GS + V++++ G+
Sbjct: 517 GQLLISGSADATIQVWNLKTGD 538
>gi|432958967|ref|XP_004086133.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1-like
[Oryzias latipes]
Length = 610
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
++GR+L +G D V + L K I H V + +S + + A+GS G+++
Sbjct: 31 STGRLLATGGEDCRVNLWSLNKANCIMSLTGHKTA-VECIQFSLSEEQV-AAGSQSGSIR 88
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K + T+ ++++ + FHP+G +A+ D +DVR+ V
Sbjct: 89 VWD--LEAAKILQTLM--GHKASITSLGFHPYGQ-FLASSSMDTNIKLWDVRRK-GYVFR 142
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
F GH V + F D L +A D +KLW+++ ++I +K H N V +
Sbjct: 143 FKGHTDAVRSLAFSPDGKWLASASDDCTVKLWDLSQGKIITEFKSHSAAVNIVQFHPNEY 202
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS V ++D+ E T G+ G S++ D L +G
Sbjct: 203 --LLASGSSDRSVRLWDL-----------EKFTMIGTLEGDTSAIRCVCFSPDGSCLFSG 249
Query: 348 GSDGL 352
+D L
Sbjct: 250 ATDSL 254
>gi|259485503|tpe|CBF82580.1| TPA: U5 snRNP complex subunit, putative (AFU_orthologue;
AFUA_7G02280) [Aspergillus nidulans FGSC A4]
Length = 359
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 125/302 (41%), Gaps = 35/302 (11%)
Query: 24 DFNLRTTVSSSSSPNAAVSDSIG------VIEFDPSDSVFATGGIARKIRIYNIKSVLVD 77
D L V +S NA + + G + FDP+ A+G + R I ++N
Sbjct: 42 DGTLVQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNT------ 95
Query: 78 HPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFER 137
+ + +Y I + K + L + + + S D + +D+E I
Sbjct: 96 --------YGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRY 147
Query: 138 DEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEF 197
H + SV+ SK + S SDDGTM +WDPR + + ++ +AV E
Sbjct: 148 IGHE-EVINSVEISKRGQEMLVSASDDGTMGIWDPRQK--EAIDYLETELPITAVAQSE- 203
Query: 198 HPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCL 256
+ V +G D + +D+RK V GH T+T + D TL++ D +
Sbjct: 204 ---AGNEVFSGGIDNAIHVWDIRKKA-IVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTV 259
Query: 257 KLWNVN----DSRVIRTYKGHV--NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
+ W++ +R IRTY G +N + S G + GS V V+D + G+
Sbjct: 260 RTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKI 319
Query: 311 VW 312
++
Sbjct: 320 LY 321
>gi|302924651|ref|XP_003053937.1| hypothetical protein NECHADRAFT_57721 [Nectria haematococca mpVI
77-13-4]
gi|256734878|gb|EEU48224.1| hypothetical protein NECHADRAFT_57721 [Nectria haematococca mpVI
77-13-4]
Length = 247
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 54 DSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRV 113
D+ A+G + + IR++ + S P + H+ + I T GR
Sbjct: 15 DNTLASGSLDQTIRLWELASPT--SPSKTFLAHANIMSVAIST-------------DGRY 59
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L SG +D +V +DLE E H + SV S L ASGS D T+++WD +
Sbjct: 60 LASGAHDNLVRVWDLESGDLALELSGHDS-SIASVALSPDGRYL-ASGSLDMTIRLWDLK 117
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLVFDG 231
G V T+ V V F P S L A+G +DK +D R K + +L G
Sbjct: 118 ---GNLVETLDDHI--GCVHAVAFSPNNSRL-ASGSSDKTVILWDTRPGKPIKQLLCLRG 171
Query: 232 HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
H V + F D + L + D + +W+V S+ I +GH
Sbjct: 172 HTDFVWSVAFTHDGERLASGSADKTIIIWDVATSQKIHVLRGH 214
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS---RSAVCCVEFHPFG 201
V SV S D L ASGS D T+++W+ S PS + + + V G
Sbjct: 6 VRSVAVSAKDNTL-ASGSLDQTIRLWE-------LASPTSPSKTFLAHANIMSVAISTDG 57
Query: 202 SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN 260
L A+G D +D+ D L GH ++ + D L + D ++LW+
Sbjct: 58 RYL-ASGAHDNLVRVWDLESG-DLALELSGHDSSIASVALSPDGRYLASGSLDMTIRLWD 115
Query: 261 VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ ++ T H+ + V S + L GS V ++D R G+P+
Sbjct: 116 LK-GNLVETLDDHIGCVHAVAFS--PNNSRLASGSSDKTVILWDTRPGKPI 163
>gi|449545524|gb|EMD36495.1| hypothetical protein CERSUDRAFT_115528 [Ceriporiopsis subvermispora
B]
Length = 1479
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 25/265 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWK 106
+ P S A+G + IR++N ++ V +P+ H + +P
Sbjct: 1111 LAVSPDGSYIASGSADKTIRLWNARTGQQVANPLSG---HDNWVHSLVFSP--------- 1158
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
G L SG D + +D +P+ + + + +WSV +S D + SGS D T
Sbjct: 1159 ---DGTQLVSGSSDRTIRIWDARTGMPVMKPLKGHAKTIWSVAFSP-DGIQIVSGSADAT 1214
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+Q+W+ G + + ++ + R V + F P G+ ++ +G AD +D R +
Sbjct: 1215 LQLWNA-TTGDRLMEPLKGHSDR--VFSIAFSPDGARII-SGSADATIRLWDARTGDAAM 1270
Query: 227 LVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDS-RVIRTYKGHVNNRNFVGLSV 284
GH TVT + F D + + + D + LWN V++ +GH + + V S
Sbjct: 1271 EPLRGHTDTVTSVIFSPDGEVIASGSADTTVWLWNATTGVPVMKPLEGHSDKVSSVAFS- 1329
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGE 309
G L GS N + V+DV G+
Sbjct: 1330 -PDGTRLVSGSYDNTIRVWDVTPGD 1353
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 27/231 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P+ + +G + +RI+N + V D + +SS+ + P
Sbjct: 766 VVFSPNGTRIVSGSLDNTVRIWN------------AITGELVIDPHRGHRKGVSSVSFSP 813
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G + SG D + + E P+ + E V SV +S D S SDD T+
Sbjct: 814 --DGTRIISGSLDHTLRLWHAETGDPLLDAFEGHTDMVRSVLFSP-DGRQVVSCSDDRTI 870
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK---MVD 224
++WD G + + ++ V V F P G+ +A+G D +D R ++D
Sbjct: 871 RLWD-VLRGEEVMKPLR--GHTGIVYSVAFSPDGTR-IASGSGDSTIKLWDARTGAPIID 926
Query: 225 PVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT-YKGH 273
P++ GH +V + F D +V++ TD ++LW+ R ++ ++GH
Sbjct: 927 PLV---GHTDSVLSVAFSPDGTRIVSSSTDKTVRLWDAATGRPVKQPFEGH 974
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 133 PIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSA 191
P+ + H G V++V +S + SGS D T+++WD R G + +QP R
Sbjct: 709 PLLQMSGHTGT-VFAVAFSPNGTRV-VSGSGDDTVRIWDARS--GDLI--MQPLEGHRGE 762
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDV---RKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
V V F P G+ +V +G D ++ ++DP GHRK V+ + F T +
Sbjct: 763 VISVVFSPNGTRIV-SGSLDNTVRIWNAITGELVIDP---HRGHRKGVSSVSFSPDGTRI 818
Query: 249 TAGT-DGCLKLWNVND-SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+G+ D L+LW+ ++ ++GH + V S G + S+ + ++DV
Sbjct: 819 ISGSLDHTLRLWHAETGDPLLDAFEGHTDMVRSVLFS--PDGRQVVSCSDDRTIRLWDVL 876
Query: 307 WGEPV 311
GE V
Sbjct: 877 RGEEV 881
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V+SV +S D ASGS D T+++WD R G + + +V V F P G+ +
Sbjct: 892 VYSVAFSP-DGTRIASGSGDSTIKLWDART-GAPIIDPL--VGHTDSVLSVAFSPDGTRI 947
Query: 205 VAAGCADKKAYAYDV---RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWN 260
V++ DK +D R + P F+GH V + F D T+V+ D ++LW
Sbjct: 948 VSSST-DKTVRLWDAATGRPVKQP---FEGHGDLVWSVGFSPDGRTVVSGSGDKTIRLWR 1003
Query: 261 VN 262
N
Sbjct: 1004 AN 1005
>gi|303315843|ref|XP_003067926.1| Cell cycle control protein, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240107602|gb|EER25781.1| Cell cycle control protein, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 299
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 45/319 (14%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
FDP+ A+GG+ R I ++ + + +Y + T K + L
Sbjct: 14 FDPTGQHIASGGMDRSILLWRT--------------YGQCENYGVMTGHKGAVLDLHWSR 59
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSKGDPVLGASGSDDGTMQ 168
R++ S D + +DLE I R G V + +D SK L SGSDDG +
Sbjct: 60 DSRIIFSASADMTLASWDLESGERI--RRHVGHEEVINCLDLSKRGQELLISGSDDGCIG 117
Query: 169 MWDPR-CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+WDPR D + T P + V G+ + + G D + +D+RK V
Sbjct: 118 IWDPRKKDAIDFLETEMP------ITAVALAEAGNEIYSGGI-DNDIHVWDIRKR-SIVY 169
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHVN--NRNFV 280
GH TVT ++ D +L++ D ++ W++ R I+TY G +N +
Sbjct: 170 SMIGHTDTVTSLQISPDSQSLLSNSHDSTVRTWDIRPFAPADRHIKTYDGATTGLEKNLI 229
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S +G + GS V ++D + + ++ +G V+ V R D
Sbjct: 230 RASWSPNGEKIAAGSGDRSVVIWDTKSAKILY--------KLPGHKGVVNDV--RFAPND 279
Query: 341 ECTLVAGGSDGLLHVFVGK 359
E +V+G SD +F+G+
Sbjct: 280 EPIIVSGSSDRC--IFLGE 296
>gi|72014208|ref|XP_784087.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
[Strongylocentrotus purpuratus]
Length = 349
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 29/263 (11%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P+ A+ R I ++N+ + + +Y + + + ++ T
Sbjct: 66 FHPNGQSLASASFDRSILLWNV--------------YGECENYGVLKGHQGAVMELHYNT 111
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G + S D +V +D E + H V S Y++ P L SGSDDGT+++
Sbjct: 112 DGSQIVSCATDKMVCLWDTETGARVKRMRGHTSF-VNSCYYARRGPSLVTSGSDDGTIKI 170
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD R G C T Q S V V F+ +++ G D +D+RK +
Sbjct: 171 WDTRKRG--CAQTFQ---STYQVLAVSFNDTSDQIISGGI-DNDMKVWDLRKN-GLLYKM 223
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV----NDSRVIRTYKGHVNN--RNFVGL 282
GH +VT I D +V+ D L++W+V + R ++ ++GH +N +N +
Sbjct: 224 SGHSDSVTGIELSPDGSYIVSNSMDNTLRIWDVRPFASPERCVKIFQGHQHNFEKNLLRC 283
Query: 283 SVWRHGGLLGCGSETNQVFVYDV 305
S G + GS V+V+D
Sbjct: 284 SWSPDGSKVAAGSADRHVYVWDT 306
>gi|75909063|ref|YP_323359.1| WD-40 repeat-containing serine/threonine protein kinase [Anabaena
variabilis ATCC 29413]
gi|75702788|gb|ABA22464.1| serine/threonine protein kinase with WD40 repeats [Anabaena
variabilis ATCC 29413]
Length = 677
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 113/267 (42%), Gaps = 30/267 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + F P +G I+I+N+K+ V + + HS +P
Sbjct: 436 SRKVNAVVFSPDGKTLVSGSDDNTIKIWNLKTGQV---IRTITGHSDAVHTLAISP---- 488
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
+G+ L SG D V ++L I + G W SV S D V A
Sbjct: 489 --------NGKTLVSGSDDNTVKVWNLNTGRLI---NTLTGHTFWVRSVAISP-DGVNIA 536
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++W+ + G T+ + + V + F P G++L A+ D+ + V
Sbjct: 537 SGSFDKTVKIWN--LETGNLTHTL--AGNGETVTSIAFSPDGNTL-ASASRDRTIKIWKV 591
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V G +T+T I F D +TL +A D +KLWN+ IRT +GH N
Sbjct: 592 GAGTR-VRTLKGSTETITSIAFSPDGNTLASASRDQTIKLWNLETGEEIRTLEGHENTVT 650
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDV 305
V + G L GSE N + ++ +
Sbjct: 651 TVAFT--PDGANLVSGSEDNTMRIWRI 675
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
+A + P G + + G +D+ + + D + +GH + V + F D TLV
Sbjct: 395 NAFVSLAISPNGQIIASCG-SDRSIKIWQLATGED-ISTLNGHSRKVNAVVFSPDGKTLV 452
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ D +K+WN+ +VIRT GH + + + +S +G L GS+ N V V+++ G
Sbjct: 453 SGSDDNTIKIWNLKTGQVIRTITGHSDAVHTLAIS--PNGKTLVSGSDDNTVKVWNLNTG 510
Query: 309 EPV 311
+
Sbjct: 511 RLI 513
>gi|326476870|gb|EGE00880.1| U5 snRNP complex subunit [Trichophyton tonsurans CBS 112818]
gi|326485480|gb|EGE09490.1| WD repeat-containing protein 57 [Trichophyton equinum CBS 127.97]
Length = 361
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 128/308 (41%), Gaps = 37/308 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
FDP+ A+ G+ R I ++ + +Y I T K + L +
Sbjct: 74 FDPTGQHIASSGMDRSILLWRT--------------YGNCENYGILTGHKGAILDLQWSR 119
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
L S D + +DLE I +H V +D S+ L SGSDDG++ +
Sbjct: 120 DSHTLFSASADMTLASWDLESGTRIRRYMDHT-EIVNCLDISRRGQELLISGSDDGSIGI 178
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WDPR + ++ SAS V V G+ + + G + + +D+RK +
Sbjct: 179 WDPRQK--TAIDYLESSASM-PVTAVALSEAGNEIYSGGI-ENDIHVWDIRKRAITYSMI 234
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHVN--NRNFVGL 282
GH T++ ++ D TL++ D + W++ R IRT+ G +N +
Sbjct: 235 -GHTDTISSLQISPDSQTLLSNSHDSTARTWDIRPFAPADRHIRTFDGAPTGLEKNLIRA 293
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDEC 342
S G ++ GS V V+DV+ G+ ++ +G V+ V R DE
Sbjct: 294 SWDAKGEMVAAGSGDRSVVVWDVKTGKLLY--------KLPGHKGTVNDV--RFTPADEP 343
Query: 343 TLVAGGSD 350
+V+G SD
Sbjct: 344 IIVSGSSD 351
>gi|242804736|ref|XP_002484436.1| wd40 protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218717781|gb|EED17202.1| wd40 protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1522
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 25/266 (9%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
++ + F P + A+G + I++++ + + + +V HS A + S+
Sbjct: 1138 TVQSVTFSPDSQLLASGFNDKTIKLWDPATGAL---IYTLVGHS----------ASVQSI 1184
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ G+VL SG D + +D + H V SV +S D L ASGSD
Sbjct: 1185 TFS--ADGQVLASGSEDQTIKLWDPATGTLKYTLVGHS-HSVQSVAFSP-DGWLLASGSD 1240
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++WDP + +S V V F P G L+A+G +DK +D
Sbjct: 1241 DQTIKLWDP---AAEALSHALEEGHSRLVQSVAFSPDG-KLLASGSSDKTIGLWDPTTGA 1296
Query: 224 DPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P+ + GH +V + F L+ +G+ D +K W+ + T KGH V
Sbjct: 1297 -PIHILTGHLHSVQSVAFSPDGQLLASGSNDQTIKFWDPAIGTLKHTLKGHSRPVQSVAF 1355
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWG 308
S G LL GS + ++D+ G
Sbjct: 1356 S--PDGWLLASGSNDKTIRLWDLTTG 1379
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 45/278 (16%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYN-----IKSVLVDHPVVAVVDHSKVCDYYICT 96
S S+ I F V A+G + I++++ +K LV H HS
Sbjct: 1178 SASVQSITFSADGQVLASGSEDQTIKLWDPATGTLKYTLVGH------SHS--------- 1222
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+ S+ + P G +L SG D + +D + +E R V SV +S D
Sbjct: 1223 ---VQSVAFSP--DGWLLASGSDDQTIKLWDPAAEALSHALEEGHSRLVQSVAFSP-DGK 1276
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGS D T+ +WDP + T + +S V F P G L+A+G D+
Sbjct: 1277 LLASGSSDKTIGLWDPTTGAPIHILTGHLHSVQS----VAFSPDGQ-LLASGSNDQTI-- 1329
Query: 217 YDVRKMVDPVL-----VFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTY 270
K DP + GH + V + F L+ +G+ D ++LW++ T
Sbjct: 1330 ----KFWDPAIGTLKHTLKGHSRPVQSVAFSPDGWLLASGSNDKTIRLWDLTTGTSRHTL 1385
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
KGH++ V S G LL S+ + ++D+ G
Sbjct: 1386 KGHLDWVRSVTFS--PDGRLLASSSDDKTIKLWDLAIG 1421
Score = 45.4 bits (106), Expect = 0.046, Method: Composition-based stats.
Identities = 49/198 (24%), Positives = 80/198 (40%), Gaps = 19/198 (9%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ S+ + P G++L SG +D + +D + + H V ++ +S +L
Sbjct: 953 IQSVAFSP--DGQLLASGSWDKTIKLWDPVTGTLKYTLEGHSAS-VQAITFSPNGQLL-V 1008
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD- 218
SGS D T++ WDP K Q V V F P G L+A D+ +D
Sbjct: 1009 SGSGDQTIKFWDPATGALKHTLEGQSKGGSHYVQLVAFSPDG-RLLAFSSLDQTIKLWDP 1067
Query: 219 --------VRKMVDPVLVFD----GHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSR 265
+ + DP FD GH + + F L+ +G+ D +KLW+
Sbjct: 1068 ATGTLKRTLERRSDPFSDFDPHSEGHTDYIQSVAFSPDGQLLASGSWDKTIKLWDPAIGS 1127
Query: 266 VIRTYKGHVNNRNFVGLS 283
+ T GH++ V S
Sbjct: 1128 LKHTLVGHLSTVQSVTFS 1145
>gi|440702948|ref|ZP_20883927.1| WD domain, G-beta repeat protein [Streptomyces turgidiscabies Car8]
gi|440275505|gb|ELP63914.1| WD domain, G-beta repeat protein [Streptomyces turgidiscabies Car8]
Length = 1288
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 106/259 (40%), Gaps = 36/259 (13%)
Query: 57 FATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
ATGG +R++++ + + +V H+ V + +P GR L S
Sbjct: 841 LATGGADFTVRLWDVTTPRLPRQTQTLVGHTDVVNAVAFSP------------DGRRLAS 888
Query: 117 GDYDGVVMEYDLEKKVPIFE----RDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
G DG V +++ + P E R G V S+ + G VL ASGS+D T ++WD
Sbjct: 889 GSLDGTVRRWEVAGRGPARELPVLRGHTGS--VRSLAFGLGGRVL-ASGSEDRTTRLWD- 944
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP--VLVFD 230
+ + S+V V F P G L+A+ D ++V P +
Sbjct: 945 -------LPGPALTGHTSSVYSVAFSP-GGRLLASASYDATVRLWNVADKRRPRELPPLT 996
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDS---RVIRTYKGHVNNRNFVGLSVWR 286
GH V + F D L +A DG L+LW++ + R + N N V S
Sbjct: 997 GHSGPVNSVAFRPDGHILASASADGTLRLWDLAATPHPRPPSVVPARIGNVNTVAFSP-- 1054
Query: 287 HGGLLGCGSETNQVFVYDV 305
GG L G E V ++D
Sbjct: 1055 DGGTLATGGEQGTVRLWDA 1073
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 100/255 (39%), Gaps = 35/255 (13%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIG---VIEFDPSDSVFATGGIARKIRIYNIKSVLVDHP 79
WD + P + V IG + F P ATGG +R+++ +
Sbjct: 1026 WDL----AATPHPRPPSVVPARIGNVNTVAFSPDGGTLATGGEQGTVRLWDAADPRLPRG 1081
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK---VPIFE 136
+ +V+ + D P GR L G +G+ +D+ + +
Sbjct: 1082 L-SVLPGTGPVDTVAFAP------------DGRTLAVGSRNGLATLWDVTGRRHPTRLAV 1128
Query: 137 RDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW---DPRCDGGKCVSTVQPSASRSAVC 193
+H G V SV ++ L A+GS+D T+++W DPR +S + + V
Sbjct: 1129 LTDHAGA-VKSVAFAPDGRTL-ATGSEDRTVRLWNLSDPR----HPLSQHRLTGYTDGVM 1182
Query: 194 CVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAG 251
V F P G L A + + Y R + +P L GH K V + F D TL T
Sbjct: 1183 SVAFAPGGRQLATASSDNNVRLYGLTARDVEEPAL-LTGHTKPVDTLAFSPDGRTLATGS 1241
Query: 252 TDGCLKLWNVNDSRV 266
D + LW+ + RV
Sbjct: 1242 EDWTVLLWDPDVERV 1256
>gi|354477896|ref|XP_003501154.1| PREDICTED: WD repeat-containing protein 5B-like [Cricetulus
griseus]
gi|344236576|gb|EGV92679.1| WD repeat-containing protein 5B [Cricetulus griseus]
Length = 329
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 61/262 (23%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
A +SS+K+ P +G L S D +++ YD + K ++ + WS D S+
Sbjct: 41 AAISSVKFSP--NGEWLASSAADTLIIIWGAYDGKCKKTLYGHNLEISDVAWSSDSSRL- 97
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
S SDD T+++WD R GKC+ T++ R V C F+P S+L+ +G D+
Sbjct: 98 ----VSASDDKTLKLWDVR--SGKCLKTLK--GHRDFVFCCNFNP-PSNLIVSGSFDESV 148
Query: 215 YAYDVRK---------MVDPV----------LVFDGH----------------------- 232
++V+ DP+ L+ G
Sbjct: 149 KIWEVKTGKCLKTLSAHSDPISAVHFNCNGSLIVSGSYDGLCRIWDAASGQCLKTLADDG 208
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGG 289
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV G
Sbjct: 209 NPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSV-TGGK 267
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
+ GSE N V++++++ E V
Sbjct: 268 WVVSGSEDNMVYIWNLQTKEIV 289
>gi|443898441|dbj|GAC75776.1| WD40 repeat-containing protein [Pseudozyma antarctica T-34]
Length = 872
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 144 RVWSVDYSK-GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
RVW VD ++ G V ASG D T+++WD + G+C +T++ A V FHP
Sbjct: 576 RVWDVDSTRTGGHVASASG--DSTVKVWD--VESGQCRTTLR--AGVGDVYSCRFHPDER 629
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTL-VTAGTDGCLKLWNV 261
+V+AG DK YDV + V F GH+ V+ F + L VTA D ++ W+V
Sbjct: 630 HIVSAGY-DKLVRMYDV-ETGSIVKTFTGHQLGVSSAIFNPLGNLIVTASKDTTIRFWDV 687
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA 321
IRT GH+ + + G LL S+ N ++D+R P+ T+
Sbjct: 688 VSGLCIRTITGHLG--EVTSVEINETGSLLLSSSKDNSNRLWDLRMLRPLKRFKGHQNTS 745
Query: 322 AGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ F+ S LV G DGL++++
Sbjct: 746 ----KNFIRSSF-----AHTSLLVGGSEDGLIYMW 771
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 112 RVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKGDPV--LGASGSDDGTM 167
R + S YD +V YD+E V F + G V + +P+ L + S D T+
Sbjct: 629 RHIVSAGYDKLVRMYDVETGSIVKTFTGHQLG------VSSAIFNPLGNLIVTASKDTTI 682
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+ WD G C+ T+ + V VE + GS L+++ D +D+R M+ P+
Sbjct: 683 RFWD--VVSGLCIRTI--TGHLGEVTSVEINETGSLLLSS-SKDNSNRLWDLR-MLRPLK 736
Query: 228 VFDGHRKTV-TYIR--FLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
F GH+ T +IR F LV DG + +W+ S V++T +GH
Sbjct: 737 RFKGHQNTSKNFIRSSFAHTSLLVGGSEDGLIYMWDQESSEVLQTLEGH 785
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 25/133 (18%)
Query: 231 GHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW--- 285
GHRK V +RF+ + +V+ +D ++LW+ N R +GH + VW
Sbjct: 529 GHRKNVKSVRFVGEEGRKIVSGSSDNTVRLWHANTGRCEGVLQGHRSR-------VWDVD 581
Query: 286 --RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
R GG + S + V V+DV G+ + R V V R DE
Sbjct: 582 STRTGGHVASASGDSTVKVWDVESGQ-----------CRTTLRAGVGDVYSCRFHPDERH 630
Query: 344 LVAGGSDGLLHVF 356
+V+ G D L+ ++
Sbjct: 631 IVSAGYDKLVRMY 643
>gi|328770134|gb|EGF80176.1| hypothetical protein BATDEDRAFT_11342 [Batrachochytrium
dendrobatidis JAM81]
Length = 492
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR-VWSVDYSK-GDPVL 157
++++++ P T+ +L S D V +D+ R HG + + +D++ G L
Sbjct: 207 VNAIRFFPSTA-HLLLSASMDSTVRLWDVYNDRSCL-RSFHGHSKGIRDIDFNNSGSRFL 264
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS--LVAAGCADKKAY 215
AS D +++WD + G+C+S ++ CV+F+P S + GC DKK Y
Sbjct: 265 SASY--DKFLKLWD--TETGQCISKF---TTKRIPYCVKFNPDPSKQDIFLTGCQDKKIY 317
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+DVR + V +D H V I F+D + VT D L+ W V+ VI+ Y
Sbjct: 318 QFDVRSG-EIVQEYDQHLGAVNTITFVDDNRRFVTTSDDKTLRAWEVDIPVVIK-YVAEP 375
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ + +++ ++ L C S NQV +Y R
Sbjct: 376 DMHSMPAVTLSQNKKWLACQSLDNQVLIYSAR 407
>gi|353244438|emb|CCA75830.1| hypothetical protein PIIN_09818 [Piriformospora indica DSM 11827]
Length = 1461
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 23/228 (10%)
Query: 111 GRVLGSGDYDGVVMEY--DLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
G + SG DG + + D ++V + + GG V V YS G P++ ASGSDDGT++
Sbjct: 1130 GSRIVSGSRDGTIRLWNADTGQRVLVPLQGHEGGVNV--VAYSPGGPLI-ASGSDDGTIR 1186
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV---RKMVDP 225
W+ G +Q +V V F P S +V+ G D+ +D+ +++ +P
Sbjct: 1187 TWNA-ITGEPLGKPLQ--GHEDSVLAVAFSPDASRIVS-GSNDRTIRLWDIETGQQLGEP 1242
Query: 226 VLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVI-RTYKGHVNNRNFVGLS 283
F GH K ++ + F LD +V+ DG ++LWN N S+ + H + VGLS
Sbjct: 1243 ---FIGHSKRISAVLFSLDGSQIVSGSADGTIRLWNTNTSQPFGEPLQVHKYSVLAVGLS 1299
Query: 284 VWRHGGLLGCGSETNQVFVYDVR----WGEPVWVHDFEPVTAAGSERG 327
G + GSE + ++D+ G+P+ H+ + A S G
Sbjct: 1300 --PDGSRIVSGSEDKTIQIWDMNTGRSLGQPLRGHEDSVLAVAFSPDG 1345
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 18/158 (11%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQP-----SASRSAVCCVEFHPFGSSLVAAGCADKKA 214
SGS+D T+++WD V T QP A + +V V F P G +A+G +D+
Sbjct: 963 SGSEDMTIRLWD--------VETGQPFGKPLRAHQYSVLTVAFSPDGVR-IASGSSDRSI 1013
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVI-RTYKG 272
+D + H +V + F D +V++ D ++LW+ R + + +G
Sbjct: 1014 LIWDANTGQLLRQLLQAHGDSVLAVSFSPDCSKVVSSSFDNTVRLWDPVAGRPLGESLRG 1073
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
H ++ V S G + GSE V ++ + GEP
Sbjct: 1074 HEDSVLTVAFS--PDGSRIASGSEDMTVRLWVLDTGEP 1109
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 55/209 (26%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQP-----SASRSAVCCVEFHPFGSSLVAAGCADKKA 214
SGSDD T+++WD V T QP +V V P GS +V +G +D+
Sbjct: 807 SGSDDETIRLWD--------VDTGQPLGEPLRGHEDSVKAVAISPDGSQIV-SGSSDETI 857
Query: 215 YAYDV---RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSR----- 265
+D + + +P F GH + + F D +V++ D ++LW+V+
Sbjct: 858 RLWDAESGKLLAEP---FQGHESVINAVAFSPDGSRIVSSSADKTIRLWDVDTGHWRPLR 914
Query: 266 ----------VIRTYKGH-------------VNNRNFVGLSVWRHGGLLGCGSETNQVFV 302
V+ H V +R+ V S G + GSE + +
Sbjct: 915 GRVGDASIRVVVLARPAHESSTGSSDNDGPTVGSRDSVAFS--PDGSRVVSGSEDMTIRL 972
Query: 303 YDVR----WGEPVWVHDFEPVTAAGSERG 327
+DV +G+P+ H + +T A S G
Sbjct: 973 WDVETGQPFGKPLRAHQYSVLTVAFSPDG 1001
>gi|359459675|ref|ZP_09248238.1| WD repeat-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 1191
Score = 64.3 bits (155), Expect = 9e-08, Method: Composition-based stats.
Identities = 68/228 (29%), Positives = 106/228 (46%), Gaps = 28/228 (12%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L SG D + +DL+ I H VWSV ++ L SGS D TM++W +
Sbjct: 921 LASGHEDSSLKLWDLQTHQCIHTITGHLNT-VWSVAFNPSGDYL-VSGSADQTMKLW--Q 976
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
+ G+ + T S + VC V FHP + ++A+G D+ +++ V GH
Sbjct: 977 TETGQLLQTF--SGHENWVCSVAFHP-QAEVLASGSYDRTIKLWNMTSG-QCVQTLKGHT 1032
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH--GGL 290
+ I F D + L ++GTD +KLW+V + + T +GH N+V +SV H G L
Sbjct: 1033 SGLWAIAFSPDGELLASSGTDQTIKLWDVQTGQCLNTLRGH---GNWV-MSVAFHPLGRL 1088
Query: 291 LGCGSETNQVFVYDVRWGE----------PVWVHDFEP---VTAAGSE 325
L S + + V+DV+ E VW F P + A+G +
Sbjct: 1089 LASASADHTLKVWDVQSSECLQTLSGHQNEVWSVAFSPDGQILASGGD 1136
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
VL SG YD + +++ + H +W++ +S +L +SG+D T+++W
Sbjct: 1002 AEVLASGSYDRTIKLWNMTSGQCVQTLKGHTSG-LWAIAFSPDGELLASSGTDQ-TIKLW 1059
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G+C++T++ + V V FHP G L+A+ AD +DV+ + +
Sbjct: 1060 DVQT--GQCLNTLRGHGN--WVMSVAFHPLGR-LLASASADHTLKVWDVQSS-ECLQTLS 1113
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
GH+ V + F D L + G D LKLW+VN ++T +
Sbjct: 1114 GHQNEVWSVAFSPDGQILASGGDDQTLKLWDVNTYDCLKTLR 1155
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 17/174 (9%)
Query: 139 EHGGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEF 197
+HG VWS+ +G V AS S D T+++WD + G+C+ T + V V F
Sbjct: 696 QHG---VWSIAIDPQGKYV--ASASADQTIKLWDVQT--GQCLRTFK--GHSQGVWSVTF 746
Query: 198 HPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCL 256
P G L+A G AD+ ++V+ + F GH+ V + F D LV+ D +
Sbjct: 747 SPDGK-LLATGSADQTIKLWNVQTG-QCLNTFKGHQNWVWSVCFYPQGDILVSGSADQSI 804
Query: 257 KLWNVNDSRVIRTYKGHVNNRNFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+LW + + +R GH +N+V ++V G L+ GSE + ++D+ G+
Sbjct: 805 RLWKIQTGQCLRILSGH---QNWVWSVAVSPEGNLMASGSEDRTLRLWDIHQGQ 855
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 142 GRRVW--SVDYS----KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCV 195
G R W SV YS + P L AS S D +++WD + G+C+ T+ + + V +
Sbjct: 648 GHRSWVMSVAYSPSGKESQPFL-ASCSADRKIKLWDVQT--GQCLQTL--AEHQHGVWSI 702
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDG 254
P G VA+ AD+ +DV+ + F GH + V + F D L T D
Sbjct: 703 AIDPQGK-YVASASADQTIKLWDVQTG-QCLRTFKGHSQGVWSVTFSPDGKLLATGSADQ 760
Query: 255 CLKLWNVNDSRVIRTYKGHVNNRNFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+KLWNV + + T+KGH +N+V + + G +L GS + ++ ++ G+
Sbjct: 761 TIKLWNVQTGQCLNTFKGH---QNWVWSVCFYPQGDILVSGSADQSIRLWKIQTGQ 813
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P V GS D + + + + + F E+ V SV + VL ASG
Sbjct: 953 SVAFNPSGDYLVSGSADQTMKLWQTETGQLLQTFSGHENW---VCSVAFHPQAEVL-ASG 1008
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ G+CV T++ S + + F P G L ++G D+ +DV+
Sbjct: 1009 SYDRTIKLWN--MTSGQCVQTLK--GHTSGLWAIAFSPDGELLASSG-TDQTIKLWDVQT 1063
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ GH V + F + L+ +A D LK+W+V S ++T GH N V
Sbjct: 1064 G-QCLNTLRGHGNWVMSVAFHPLGRLLASASADHTLKVWDVQSSECLQTLSGHQNEVWSV 1122
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV 305
S G +L G + + ++DV
Sbjct: 1123 AFS--PDGQILASGGDDQTLKLWDV 1145
>gi|271966022|ref|YP_003340218.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270509197|gb|ACZ87475.1| WD40 repeat-domain-containing protein-like protein
[Streptosporangium roseum DSM 43021]
Length = 919
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 31/281 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P ATGG + IR++ + + + + I A+++
Sbjct: 294 TDYVLAVAFSPDGRTLATGGNDKTIRLWEVAT------------RRPIGEPLIGHTAEVN 341
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ + P GR L +G D V +D+ + PI + V +V +S L SG
Sbjct: 342 VVAFSP--DGRTLATGSRDRTVRLWDVATQRPIGDAFTSSADEVNAVAFSPDGHTLATSG 399
Query: 162 SDDGTMQMWD--PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
D+ +++WD R GK + + + V V F P G +L A G D +D
Sbjct: 400 GDN-MIRLWDVASRRPIGKPL-----TGHTAEVNAVVFSPDGRTL-ATGGDDNMIRLWDA 452
Query: 220 RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVI-RTYKGHVNNR 277
GH K VT + F D TL T+G D ++LW+ R I + GH
Sbjct: 453 ASRRPIGKPLTGHTKKVTSVAFSPDGRTLATSGGDNMIRLWDAASRRPIGKLLTGHTAGV 512
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDV----RWGEPVWVH 314
V S G L GS + ++DV GEP+ H
Sbjct: 513 LSVAFSA--DGRTLASGSLDRSIRLWDVATRSSIGEPLVGH 551
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 136/330 (41%), Gaps = 44/330 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV-VAVVDHSKVCDYYICTPAKL 100
+D + + F P AT G IR++++ S P+ + H+ + + +P
Sbjct: 380 ADEVNAVAFSPDGHTLATSGGDNMIRLWDVAS---RRPIGKPLTGHTAEVNAVVFSP--- 433
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
GR L +G D ++ +D + PI + ++V SV +S L S
Sbjct: 434 ---------DGRTLATGGDDNMIRLWDAASRRPIGKPLTGHTKKVTSVAFSPDGRTLATS 484
Query: 161 GSDDGTMQMWDP--RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
G D+ +++WD R GK + + + V V F G +L A+G D+ +D
Sbjct: 485 GGDN-MIRLWDAASRRPIGKLL-----TGHTAGVLSVAFSADGRTL-ASGSLDRSIRLWD 537
Query: 219 V--RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVI-RTYKGHV 274
V R + LV GH V + F D T+ +AG+D ++LW+ + R GH
Sbjct: 538 VATRSSIGEPLV--GHTDAVYAVAFSADNRTVASAGSDTSVRLWDASAHRPAGEPLTGHT 595
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCW 334
+ V S G L G V ++D P+ +P+T G +V
Sbjct: 596 DAVYAVAFSP--DGRTLATGGGDKTVRLWDGATRRPI----GKPLT------GHTDAVES 643
Query: 335 RRVGEDECTLVAGGSDGLLHVF-VGKKKPL 363
D TL +GG D + ++ V ++P+
Sbjct: 644 VAFSPDGRTLASGGDDHTVRLWEVATRRPI 673
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 118/287 (41%), Gaps = 55/287 (19%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV-VAVVDHSKVCDYYICTPAKL 100
+D++ + F P ATGG + +R+++ + P+ + H+ + +P
Sbjct: 595 TDAVYAVAFSPDGRTLATGGGDKTVRLWDGAT---RRPIGKPLTGHTDAVESVAFSP--- 648
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
GR L SG D V +++ + PI E G SVD+S L AS
Sbjct: 649 ---------DGRTLASGGDDHTVRLWEVATRRPIGE--PMNGPLALSVDFSPDGRTL-AS 696
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSAS-----RSAVCCVEFHPFGSSLVAAGCADKKAY 215
G D T+++W+ V+T +P + V V F P G L +G AD
Sbjct: 697 GGGDHTVRLWE--------VATRRPIGEPLIGHTAEVNAVAFSPDGRILATSG-ADYTVR 747
Query: 216 AYDV---RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+DV R + +P GH +TV + F D + +A D ++LW+V R I
Sbjct: 748 LWDVATRRPIGEP---LTGHTETVWSVAFSPDGHIVASAAGDNTVRLWDVTTRRPI---- 800
Query: 272 GHVNNRNFVGLSVW-------RHGGLLGCGSETNQVFVYDVRWGEPV 311
N V SVW G +L S T+ V ++DV P+
Sbjct: 801 ---GNPMSV-FSVWVGSVAFSPDGRMLASASSTDAVQLWDVATRRPI 843
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P A+GG +R++ + + + + I A+++++ + P
Sbjct: 685 VDFSPDGRTLASGGGDHTVRLWEVAT------------RRPIGEPLIGHTAEVNAVAFSP 732
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR+L + D V +D+ + PI E VWSV +S D + AS + D T+
Sbjct: 733 --DGRILATSGADYTVRLWDVATRRPIGEPLTGHTETVWSVAFSP-DGHIVASAAGDNTV 789
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVC-----CVEFHPFGSSLVAAGCADK-KAYAYDVRK 221
++WD V+T +P + +V V F P G L +A D + + R+
Sbjct: 790 RLWD--------VTTRRPIGNPMSVFSVWVGSVAFSPDGRMLASASSTDAVQLWDVATRR 841
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN 262
+ VL +G V + F D L +A D ++W++
Sbjct: 842 PIGEVL--NGPADVVGSVAFSPDGRMLASANWDNTARIWDLT 881
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 29/213 (13%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSAS-----RSAVCCVEFHPFGSSLVAAGCADKK 213
A+G +D T+++W+ V+T +P + V V F P G +L A G D+
Sbjct: 310 ATGGNDKTIRLWE--------VATRRPIGEPLIGHTAEVNVVAFSPDGRTL-ATGSRDRT 360
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVI-RTYK 271
+DV F V + F D TL T+G D ++LW+V R I +
Sbjct: 361 VRLWDVATQRPIGDAFTSSADEVNAVAFSPDGHTLATSGGDNMIRLWDVASRRPIGKPLT 420
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
GH N V S G L G + N + ++D P+ +P+T G
Sbjct: 421 GHTAEVNAVVFSP--DGRTLATGGDDNMIRLWDAASRRPI----GKPLT------GHTKK 468
Query: 332 VCWRRVGEDECTLVAGGSDGLLHVF-VGKKKPL 363
V D TL G D ++ ++ ++P+
Sbjct: 469 VTSVAFSPDGRTLATSGGDNMIRLWDAASRRPI 501
>gi|326927185|ref|XP_003209774.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Meleagris
gallopavo]
Length = 663
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K + H + S+ S + ++ A GS G++++
Sbjct: 37 SGRLLATGGDDCRVNVWSVNKPNCVMSLSGHTTP-IESLQISAKEELIVA-GSQSGSIRV 94
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+GS VA+G D +DVR+ + +
Sbjct: 95 WD--LEAAKILRTLL--GHKANICSLDFHPYGS-FVASGSLDTDIKLWDVRRK-GCIFKY 148
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
H + V +RF D L +A D +KLW++ +V+ + GH N V +
Sbjct: 149 KSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEY- 207
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F V+ E V V + D C L G
Sbjct: 208 -LLASGSSDRTIRFWD--------LEKFHVVSCIEEEATPVRCVLF---NPDGCCLYGGY 255
Query: 349 SDGL 352
D L
Sbjct: 256 QDSL 259
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 23/186 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSS 102
+I ++F P S A+G + I++++++ K C + Y +
Sbjct: 112 NICSLDFHPYGSFVASGSLDTDIKLWDVRR--------------KGCIFKYKSHTQAVRC 157
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
L++ P G+ L S D V +DL +FE H G V V++ + +L ASGS
Sbjct: 158 LRFSP--DGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGP-VNVVEFHPSEYLL-ASGS 213
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T++ WD + VS ++ A+ V CV F+P G L + Y ++ +
Sbjct: 214 SDRTIRFWD--LEKFHVVSCIEEEAT--PVRCVLFNPDGCCLYGGYQDSLRVYGWEPERC 269
Query: 223 VDPVLV 228
D VLV
Sbjct: 270 FDVVLV 275
>gi|282896190|ref|ZP_06304213.1| hypothetical protein CRD_01071 [Raphidiopsis brookii D9]
gi|281198879|gb|EFA73757.1| hypothetical protein CRD_01071 [Raphidiopsis brookii D9]
Length = 1337
Score = 64.3 bits (155), Expect = 9e-08, Method: Composition-based stats.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 33/234 (14%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D + + F P ATG R++N + LV + ++++S
Sbjct: 1044 DWVTSVSFSPDGQTIATGSRDNTARLWNREGHLVQE--------------FKGHQSRVTS 1089
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGAS 160
+ + P G+ +G+G D ++L+ V E G + W SV +S + A+
Sbjct: 1090 VNFSP--DGQTIGTGSADKTARLWNLQGDV----LGEFPGHQDWVTSVSFSPDGQTI-AT 1142
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GS D T ++W+ + D + + V V F P G +LV G ADK A ++++
Sbjct: 1143 GSRDKTARLWNLQGDVLR-----EFPGHEDWVTSVSFSPNGQTLVTGG-ADKIARLWNLQ 1196
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
D + F GH VT + F + +TLVT D +LWN+ +IR +KGH
Sbjct: 1197 G--DLLGEFPGHEGGVTSVSFSPNGETLVTGSVDKIARLWNLK-GYLIREFKGH 1247
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 31/254 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIE--FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
+ L T + + S N G+ F P ATG + +R++N++ +
Sbjct: 737 YALNTILDAISDRNIIKGHEGGITSVCFSPDGQSIATGSWDKTVRLWNLRGENIQQ---- 792
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ ++S+ + P G+ +G+G DG ++L+ K R GG
Sbjct: 793 ----------FRGHEGGITSVCFSP--DGQSIGTGSEDGTARLWNLQGKNIQQFRGHEGG 840
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+ SV +S +G +GS+DGT ++W+ + GK + Q + V F P G
Sbjct: 841 --ITSVCFSPDGQSIG-TGSEDGTARLWNLQ---GKNIQ--QFRGHEGGITSVCFSPDGQ 892
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+ + G D+ A ++++ + + F GH VT + F D TL T D +LWN+
Sbjct: 893 N-IGTGSEDRTARLWNLQG--ENIQQFHGHEDWVTSVSFSPDGQTLATTSVDKTARLWNL 949
Query: 262 NDSRVIRTYKGHVN 275
I+ + GH N
Sbjct: 950 Q-GETIQQFHGHEN 962
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 66/286 (23%), Positives = 116/286 (40%), Gaps = 46/286 (16%)
Query: 1 MSNFHDHQ------------QPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVI 48
+ FH H+ Q A T+ ++ W+ T N S +
Sbjct: 954 IQQFHGHENWVTSVSFSPDGQTLATTSVDKTARLWNLQGETIQQFHGHENWVTS-----V 1008
Query: 49 EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPG 108
F P AT + + R++ + H + + H D+ ++S+ + P
Sbjct: 1009 SFSPDGQTLATTSVDKTARLWGLHR----HKIQEIRGHE---DW-------VTSVSFSP- 1053
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
G+ + +G D ++ E + + E H R V SV++S +G +GS D T +
Sbjct: 1054 -DGQTIATGSRDNTARLWNREGHL-VQEFKGHQSR-VTSVNFSPDGQTIG-TGSADKTAR 1109
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+W+ + D + + V V F P G + +A G DK A ++++ D +
Sbjct: 1110 LWNLQGD-----VLGEFPGHQDWVTSVSFSPDGQT-IATGSRDKTARLWNLQG--DVLRE 1161
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
F GH VT + F + TLVT G D +LWN+ ++ + GH
Sbjct: 1162 FPGHEDWVTSVSFSPNGQTLVTGGADKIARLWNLQGD-LLGEFPGH 1206
>gi|441151404|ref|ZP_20965764.1| putative WD-40 repeat protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440618965|gb|ELQ82023.1| putative WD-40 repeat protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 1341
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 132/343 (38%), Gaps = 64/343 (18%)
Query: 1 MSNFHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATG 60
+S HD + + +T R WD R V+ A + ++ + F P V A+
Sbjct: 824 LSFSHDGRTLASGSTGNAVRL-WDVATRRPVADL----AGHTGNVTAVAFSPDGKVLASA 878
Query: 61 GIARKIRIYNIKS-----VLVDH--PVVAV----------------------VDHSKVCD 91
G R +R+++ ++ L H PV A+ V +
Sbjct: 879 GEDRTVRLWDARTHRPLATLTGHLQPVYAIAFNRDGTTLASGGGDRTVRLWDVAERRAVG 938
Query: 92 YYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR--RVWSVD 149
T ++++L W P L YDG+V +D++ + R++ R ++
Sbjct: 939 ELTGTADRITALAWAPNRP--TLAVASYDGIVRLWDVDSR---NAREKFTARVDSASALS 993
Query: 150 YSKGDPVLGASGSDD-GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
Y+ L A DD GT+++W G + V Q SA+ V P G ++ AAG
Sbjct: 994 YAPDGSALAAPSDDDTGTVRLWRAAGAGPETVGGRQ-----SAITSVAVSPDGRTIAAAG 1048
Query: 209 C------ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN 262
AD+ +R + P + G + D L + D ++LWNV
Sbjct: 1049 SGLTLWSADRP---RPLRTLAAPHGLISG------LVFSPKGDILASVHADRTIRLWNVR 1099
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
R++ T +GH N V S G L + +F++DV
Sbjct: 1100 TGRLLATLRGHTNTVRQVAFSP--DGSRLASVGDDRNLFLWDV 1140
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 129/320 (40%), Gaps = 41/320 (12%)
Query: 47 VIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWK 106
+ F P + AT G +R+++++ ++ ++ SL +
Sbjct: 781 ALAFSPDGRILATAGDDGTVRLWDVQ-------------RRRLLGVLTGPVGRVMSLSFS 827
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
GR L SG V +D+ + P+ + H G V +V +S VL ++G +D T
Sbjct: 828 --HDGRTLASGSTGNAVRLWDVATRRPVADLAGHTG-NVTAVAFSPDGKVLASAG-EDRT 883
Query: 167 MQMWDPRCDGGKCVST--VQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++WD R T +QP V + F+ G++L A+G D+ +DV +
Sbjct: 884 VRLWDARTHRPLATLTGHLQP------VYAIAFNRDGTTL-ASGGGDRTVRLWDVAER-R 935
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
V G +T + + + TL A DG ++LW+V+ + V++ + LS
Sbjct: 936 AVGELTGTADRITALAWAPNRPTLAVASYDGIVRLWDVDSRNAREKFTARVDSAS--ALS 993
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
G L S+ + V +W G + ++SV V D T
Sbjct: 994 YAPDGSALAAPSDDDTGTVR-------LWRAAGAGPETVGGRQSAITSVA---VSPDGRT 1043
Query: 344 LVAGGSDGLLHVFVGKKKPL 363
+ A GS GL + +PL
Sbjct: 1044 IAAAGS-GLTLWSADRPRPL 1062
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 83/211 (39%), Gaps = 33/211 (15%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDG--GKCVSTVQPSASRSAVCCVEFHPFGSSL 204
+V YS L A+GS D T+++WD D G + V P V + F P G L
Sbjct: 739 AVAYSPNGRTL-ATGSVDRTVKLWDTVTDRMLGTLIGHVGP------VYALAFSPDGRIL 791
Query: 205 VAAGCADKKAYAYDV--RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
AG D +DV R+++ V G V + F D TL + T ++LW+V
Sbjct: 792 ATAGD-DGTVRLWDVQRRRLLG---VLTGPVGRVMSLSFSHDGRTLASGSTGNAVRLWDV 847
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPV 319
R + GH N V S G +L E V ++D R P+ +PV
Sbjct: 848 ATRRPVADLAGHTGNVTAVAFSP--DGKVLASAGEDRTVRLWDARTHRPLATLTGHLQPV 905
Query: 320 TAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
A R D TL +GG D
Sbjct: 906 YAIAFNR-------------DGTTLASGGGD 923
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL-VFDGHRKTVTYIRFL-DVDTLVT 249
V V + P G +L A G D+ +D + D +L GH V + F D L T
Sbjct: 737 VNAVAYSPNGRTL-ATGSVDRTVKLWDT--VTDRMLGTLIGHVGPVYALAFSPDGRILAT 793
Query: 250 AGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
AG DG ++LW+V R++ G V + LS G L GS N V ++DV
Sbjct: 794 AGDDGTVRLWDVQRRRLLGVLTGPVG--RVMSLSFSHDGRTLASGSTGNAVRLWDVATRR 851
Query: 310 PV 311
PV
Sbjct: 852 PV 853
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 97/249 (38%), Gaps = 69/249 (27%)
Query: 152 KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD 211
KGD + AS D T+++W+ R G+ ++T++ + V V F P GS L + G D
Sbjct: 1080 KGDIL--ASVHADRTIRLWNVRT--GRLLATLR--GHTNTVRQVAFSPDGSRLASVGD-D 1132
Query: 212 KKAYAYDV---RKMVDPVLVFDGHRKTVTY------------------IRFLDV------ 244
+ + +DV R+ + L G TVTY +R D
Sbjct: 1133 RNLFLWDVAEQRRTAERKLAGSG--STVTYAPDGRTLAITENAGNQGTVRLRDAATLEET 1190
Query: 245 -------------------DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
TL T+GTD + LW+V R T +GH ++ + + SV
Sbjct: 1191 ARFTGRSFLIFAAAFSRDGKTLATSGTDHDILLWDVPGRRQAGTLRGHASSVSSLAFSV- 1249
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
G L G + + V ++DV AG G +S W D LV
Sbjct: 1250 --DGTLASGGDDDTVRLWDV-------AARSTTAVLAGHTGGVLSLAFW----PDGRALV 1296
Query: 346 AGGSDGLLH 354
+G +DG L
Sbjct: 1297 SGSADGTLR 1305
>gi|395747891|ref|XP_003778680.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Pongo
abelii]
Length = 211
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
GH + V +RF D L +A D +KLW++ +++ + GH N V
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVV 195
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVN 262
L+A G D + + + K + ++ GH V +R + L+ AG+ G +++W++
Sbjct: 35 LLATGGDDCRVNLWSINK-PNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
++++RT GH N L +G + GS+ + ++D+R
Sbjct: 94 AAKILRTLMGH--KANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
>gi|393229428|gb|EJD37051.1| WD40 repeat-like protein [Auricularia delicata TFB-10046 SS5]
Length = 283
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 108/246 (43%), Gaps = 20/246 (8%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
R L S Y+ + +D E PI + V SV YS D SG++D T+++WD
Sbjct: 53 RQLCSASYNRTIRRWDAESGAPIGKPMTGHSGGVNSVAYSP-DGTQIVSGANDCTVRLWD 111
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
G+ + + + V CV F P G+ +VA+G D + + G
Sbjct: 112 AST--GEALGAPLEGHTDT-VLCVAFSPDGA-IVASGLFDDTIRLWKGATGAH-LTTLKG 166
Query: 232 HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
H TV + F D LV+ D +++WNV ++ RT +GH N V +S G
Sbjct: 167 HSDTVASLCFSPDRIHLVSGSWDETVRIWNVETRKLERTLEGHSKAVNSVAIS--SSGKY 224
Query: 291 LGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
+ GS+ + ++D R G +PV A FV SV + G ++V+G D
Sbjct: 225 IASGSDDQTIRIWDARTG--------DPVGAPLEHTDFVYSVAFSPDGR---SIVSGFED 273
Query: 351 GLLHVF 356
G L ++
Sbjct: 274 GTLRIW 279
>gi|374987387|ref|YP_004962882.1| putative WD-40 repeat protein [Streptomyces bingchenggensis BCW-1]
gi|297158039|gb|ADI07751.1| putative WD-40 repeat protein [Streptomyces bingchenggensis BCW-1]
Length = 1294
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 128/313 (40%), Gaps = 43/313 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD +G + F P A GG RKIR++++ + + + H++ D +P
Sbjct: 765 SDFVGSVAFSPDGRTLAGGG-ERKIRLWDVAT---GKQRITLTGHTEPVDSVAFSP---- 816
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDL---EKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
GR L SG D V +++ E + + + V SV +S L
Sbjct: 817 --------DGRTLASGSQDTTVRLWNVATGELRTTLTGHSDF----VNSVAFSPDGRTL- 863
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D T+++W + + +T+ + V V F P G +L A+G DK ++
Sbjct: 864 ASGSSDKTVRLW--KVAISRLRTTL--TGHTEPVDSVAFSPDGRTL-ASGSNDKTVRLWN 918
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V P GH + + F + +G +G ++LWNV ++ T GH +
Sbjct: 919 V-ATGKPRTALTGHAEVQGSVAFSPDGHTLASGGEGKIQLWNVTTGKLRTTLTGHYDGAI 977
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
V S G L GS V + DV GE T G G +S R
Sbjct: 978 SVAFSP--DGRTLASGSNDEHVRLGDVATGE-------VRTTLTGHYDGAISVALSR--- 1025
Query: 339 EDECTLVAGGSDG 351
D TL +GG++G
Sbjct: 1026 -DARTLASGGAEG 1037
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 109/284 (38%), Gaps = 32/284 (11%)
Query: 26 NLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD 85
LRTT++ S D + + F P A+G + +R++ V + +
Sbjct: 839 ELRTTLTGHS-------DFVNSVAFSPDGRTLASGSSDKTVRLWK---VAISRLRTTLTG 888
Query: 86 HSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRV 145
H++ D +P GR L SG D V +++ P H +
Sbjct: 889 HTEPVDSVAFSP------------DGRTLASGSNDKTVRLWNVATGKPRTALTGHAEVQ- 935
Query: 146 WSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
SV +S L + G +G +Q+W+ GK +T+ + V F P G +L
Sbjct: 936 GSVAFSPDGHTLASGG--EGKIQLWN--VTTGKLRTTL--TGHYDGAISVAFSPDGRTL- 988
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR 265
A+G D+ DV + + ++ D TL + G +G + LW+V
Sbjct: 989 ASGSNDEHVRLGDVATGEVRTTLTGHYDGAISVALSRDARTLASGGAEGKIWLWDVATGE 1048
Query: 266 VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
T GH + V S G L GSE V ++DV G+
Sbjct: 1049 PRTTLTGHTDAVGSVAFSP--DGRTLASGSEDTTVRLWDVATGK 1090
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 96/250 (38%), Gaps = 26/250 (10%)
Query: 56 VFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLG 115
A+GG KI ++++ + P + H+ +P GR L
Sbjct: 1029 TLASGGAEGKIWLWDVAT---GEPRTTLTGHTDAVGSVAFSP------------DGRTLA 1073
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SG D V +D+ G + S + D ASG +D +++WD
Sbjct: 1074 SGSEDTTVRLWDVATGK--LRTTRTGQTDMVSSEAFSPDGRTLASGGNDKHVRLWD--VA 1129
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
GK +T+ + V V F P G +L A+G DK +DV GH
Sbjct: 1130 TGKLRTTL--TGQTDMVSSVAFSPDGRTL-ASGGNDKHVRLWDV-ATGKLRTTLTGHTDA 1185
Query: 236 VTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
V + F D TL + G +G + LW+V + T GH N V S G L G
Sbjct: 1186 VWSVAFSPDGRTLASGGAEGKIWLWDVATGELRATLTGHTNAVGSVAFSP--DGRTLASG 1243
Query: 295 SETNQVFVYD 304
S+ V ++D
Sbjct: 1244 SDDRTVRLWD 1253
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 126/313 (40%), Gaps = 45/313 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHS-KVCDYYICTPAKL 100
+D++G ++F P A+ G K+R++++ + V HS V D +P
Sbjct: 598 TDAVGSVKFSPDGRTLASIGEGGKVRLWDVAT---GRRRTIVTGHSDDVADSVAFSP--- 651
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDL---EKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
GR L +G D V +++ + + + + V SV +S D
Sbjct: 652 ---------DGRTLATGGADTKVHLWNVVTGKLRATLTGHSDF----VRSVAFSP-DGRT 697
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGSDD T+++ + G+ +T+ + V V F P G +L AG + K +
Sbjct: 698 VASGSDDKTVRLGN--VATGELRTTL---TGHNFVDSVAFSPDGRTL--AGGGEGKIRLW 750
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+V + GH V + F + G + ++LW+V + T GH
Sbjct: 751 EV-ATGELRATLTGHSDFVGSVAFSPDGRTLAGGGERKIRLWDVATGKQRITLTGHTEPV 809
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
+ V S G L GS+ V +++V G E T FV+SV +
Sbjct: 810 DSVAFSP--DGRTLASGSQDTTVRLWNVATG--------ELRTTLTGHSDFVNSVAF--- 856
Query: 338 GEDECTLVAGGSD 350
D TL +G SD
Sbjct: 857 SPDGRTLASGSSD 869
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 32/199 (16%)
Query: 23 WDF---NLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHP 79
WD LRTT + + D + F P A+GG + +R++++ + +
Sbjct: 1084 WDVATGKLRTTRTGQT-------DMVSSEAFSPDGRTLASGGNDKHVRLWDVATGKLRTT 1136
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
+ D +SS+ + P GR L SG D V +D+
Sbjct: 1137 LTGQTD-------------MVSSVAFSP--DGRTLASGGNDKHVRLWDVATGKLRTTLTG 1181
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H VWSV +S L ASG +G + +WD G+ +T+ + +AV V F P
Sbjct: 1182 HTD-AVWSVAFSPDGRTL-ASGGAEGKIWLWD--VATGELRATL--TGHTNAVGSVAFSP 1235
Query: 200 FGSSLVAAGCADKKAYAYD 218
G +L A+G D+ +D
Sbjct: 1236 DGRTL-ASGSDDRTVRLWD 1253
>gi|302143002|emb|CBI20297.3| unnamed protein product [Vitis vinifera]
Length = 125
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
+KLSS+ W ++ S +++GVV +D+ + + E EH RRVWS+DYS DP +
Sbjct: 5 SKLSSICWNSYIKSQI-ASSNFEGVVQVWDVTRSQVLTEMREHE-RRVWSIDYSLADPTM 62
Query: 158 GASGSDDGTMQMW 170
ASGSDDG++++W
Sbjct: 63 LASGSDDGSVKLW 75
>gi|339250910|ref|XP_003374440.1| WD domain, G-beta repeat-containing domain protein [Trichinella
spiralis]
gi|316969249|gb|EFV53377.1| WD domain, G-beta repeat-containing domain protein [Trichinella
spiralis]
Length = 456
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKV-------PI--FERDEHGGRRVWS 147
P + L W PG +G +L S + D ++ +D++ V PI F E G + V
Sbjct: 222 PGEGYGLSWNPGNAGYLLSSAE-DKMIFLWDVKSVVSPNSVLEPIETFTGHEKGVQDVQW 280
Query: 148 VDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVA 206
+++ V G+ G DD + +WD R G +S + P A + + C+ F P ++A
Sbjct: 281 HFFNEN--VFGSVG-DDEKLMLWDTRLSG--TISAMLPIHAHEAEINCLAFSPLREHMLA 335
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVND 263
G ADK +D+R M V H V +++ + L T+ +D + +WN+ D
Sbjct: 336 TGSADKTIALWDLRNMTGKFHVLTAHTDEVLKVQWAPFNEAILATSASDSRVNIWNLAD 394
>gi|302794612|ref|XP_002979070.1| hypothetical protein SELMODRAFT_2593 [Selaginella moellendorffii]
gi|300153388|gb|EFJ20027.1| hypothetical protein SELMODRAFT_2593 [Selaginella moellendorffii]
Length = 286
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 110 SGRVLGSGDYDGV--VMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
SG ++ + +D + + DLEK+V + G +++V +S L A+ S D T
Sbjct: 13 SGNLVATASWDHFCRIFDTDLEKEVGVLSGHMLG---LYAVKFSPVRRDLVATVSSDQTC 69
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W D G+C+S ++ + V + F G++L+A D +D + V V
Sbjct: 70 RLWS--LDSGECISVLE--GHKDEVNGLSFKR-GTNLLATASDDTTCIIWDAERGV-AVT 123
Query: 228 VFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GHR TV + F L+ T+ D KLW+ S+ ++T +GHV + +G+ +
Sbjct: 124 TLKGHRNTVYGVCFQPCGHLIATSSFDYTAKLWDARCSKDVQTIRGHVE--DVIGVDIDD 181
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWV 313
G LL GS+ ++D+R P+ V
Sbjct: 182 SGWLLATGSDDKSCRIWDLRMCSPLAV 208
>gi|427737501|ref|YP_007057045.1| WD40 repeat-containing protein [Rivularia sp. PCC 7116]
gi|427372542|gb|AFY56498.1| WD40 repeat-containing protein [Rivularia sp. PCC 7116]
Length = 1175
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 33/282 (11%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T + S P +++ + F P+ A+ G + I+I+N K L+ + H
Sbjct: 588 LWTRSGTKSKPLTGHKNALRTVAFSPNGKFIASAGRDKVIKIWNRKGDLLK----TLEGH 643
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
V +SS+ W P + + + SG YD V +D++ H +
Sbjct: 644 QNV----------VSSVAWSPDS--KTIASGSYDKTVKVWDVDDGKFKLSFKAHQNL-IN 690
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+V++S + AS S D T+++WD GK + + + ++F P G LV+
Sbjct: 691 AVNFSPDGKNI-ASASVDRTIKLWDTE---GKLIRIYKGHIDE--IYSIDFSPDGKKLVS 744
Query: 207 AGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
G D + V K++D F H + +RF D T+ +A D +KLWN+N
Sbjct: 745 -GSMDNTVKLWQVEDGKLID---TFRNHVSGIWKVRFSPDGKTIASASWDNTIKLWNIN- 799
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
++ T KGH N GL+ +G L SE + +++
Sbjct: 800 GILLETLKGH--NGRVRGLAWNPNGQTLASTSEDKTIRFWNL 839
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
++W VD+S ++ A+ + D T+ +W K ++ ++A+ V F P G
Sbjct: 564 QIWGVDFSPDGKII-ATANRDNTVTLWTRSGTKSKPLT-----GHKNALRTVAFSPNGKF 617
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+ +AG DK ++ + D + +GH+ V+ + + D T+ + D +K+W+V+
Sbjct: 618 IASAG-RDKVIKIWNRKG--DLLKTLEGHQNVVSSVAWSPDSKTIASGSYDKTVKVWDVD 674
Query: 263 DSRVIRTYKGHVNNRNFVGLS 283
D + ++K H N N V S
Sbjct: 675 DGKFKLSFKAHQNLINAVNFS 695
>gi|328688677|gb|AEB35950.1| COP1 [Helianthus annuus]
gi|328688707|gb|AEB35965.1| COP1 [Helianthus annuus]
gi|328688709|gb|AEB35966.1| COP1 [Helianthus annuus]
Length = 96
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 64 EPSMLVSGSDDCKVKIWSTRQEAS 87
>gi|156050805|ref|XP_001591364.1| hypothetical protein SS1G_07990 [Sclerotinia sclerotiorum 1980]
gi|154692390|gb|EDN92128.1| hypothetical protein SS1G_07990 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 592
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 124/293 (42%), Gaps = 28/293 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + + F P + A+G IR+++ + + + HS +P
Sbjct: 277 SDWVNSVAFSPDGTKVASGSYDDTIRLWD---AMTGESLQTLEGHSDWVWSVAFSP---- 329
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G + SG YD + +D + ++H V SV +S D ASG
Sbjct: 330 --------DGTKVASGSYDKTIRLWDAMTGESLQTLEDHS-DSVTSVAFSP-DGTKVASG 379
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD G+ + T++ +V V F P G+ VA+G DK +D
Sbjct: 380 SQDKTIRLWDAMT--GESLQTLE--GHSGSVWSVAFSPDGTK-VASGSHDKTIRLWDAMT 434
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + +GH +V + F T V +G+ D ++LW+ ++T +GH+ + V
Sbjct: 435 G-ESLQTLEGHSNSVLSVAFSPDGTKVASGSHDKTIRLWDAMTGESLQTLEGHLGSVTSV 493
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGS--ERGFVSS 331
S G + GS N + ++D GE + + A S ER F+S+
Sbjct: 494 AFS--PDGTKVASGSYDNTIRLWDAMTGESLQTLEGHSSLQASSAFERYFISN 544
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 26/271 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+S+ + F P + A+G + IR+++ + + + HS +P
Sbjct: 151 SNSVWSVAFSPDGTKVASGSYDKTIRLWD---AMTGESLQTLEGHSGSVWSVAFSP---- 203
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G + SG YD + +D + ++H V SV +S D ASG
Sbjct: 204 --------DGTKVASGSYDKTIRLWDAVTGESLQTLEDHS-SWVNSVAFSP-DGTKVASG 253
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD G+ + T++ V V F P G+ VA+G D +D
Sbjct: 254 SHDNTIRLWDAMT--GESLQTLE--GHSDWVNSVAFSPDGTK-VASGSYDDTIRLWDAMT 308
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + +GH V + F T V +G+ D ++LW+ ++T + H ++ V
Sbjct: 309 G-ESLQTLEGHSDWVWSVAFSPDGTKVASGSYDKTIRLWDAMTGESLQTLEDHSDSVTSV 367
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G + GS+ + ++D GE +
Sbjct: 368 AFS--PDGTKVASGSQDKTIRLWDAMTGESL 396
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D T+++WD G+ + T++ +V V F P G+ VA+G D +D
Sbjct: 83 ASGSHDNTIRLWDAVT--GESLQTLE--GHSGSVWSVAFSPDGTK-VASGSHDNTIRLWD 137
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +GH +V + F T V +G+ D ++LW+ ++T +GH +
Sbjct: 138 AVTG-ESLQTLEGHSNSVWSVAFSPDGTKVASGSYDKTIRLWDAMTGESLQTLEGHSGSV 196
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V S G + GS + ++D GE +
Sbjct: 197 WSVAFS--PDGTKVASGSYDKTIRLWDAVTGESL 228
>gi|348684824|gb|EGZ24639.1| hypothetical protein PHYSODRAFT_252422 [Phytophthora sojae]
Length = 376
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L A+GS D +++WD R G+ V+ + A + V VEFHP SL+ G D
Sbjct: 165 LVATGSHDENVRLWDVR--SGRSVAII--GAHQEPVVSVEFHPTDGSLLLTGGYDGLVRV 220
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
+DV V V RF V + T DG ++LW+ +R+Y GHVN
Sbjct: 221 WDVASRQCLRTVITEPAAPVGSARFTPNGRYVLSSTLDGTVRLWDYMRDICVRSYSGHVN 280
Query: 276 NRNFVGLSV----WRHGGLLGCGSETNQVFVYDV 305
+ + + W ++ CGSE +++F++DV
Sbjct: 281 RKFSMQCAFLEQHWNKQPVVACGSEDSRIFMWDV 314
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F+P S+ ATG +R+++++S V + H + + S++
Sbjct: 154 VSCVAFNPQGSLVATGSHDENVRLWDVRS---GRSVAIIGAHQE----------PVVSVE 200
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSD 163
+ P T G +L +G YDG+V +D+ + + V S ++ G VL S +
Sbjct: 201 FHP-TDGSLLLTGGYDGLVRVWDVASRQCLRTVITEPAAPVGSARFTPNGRYVL--SSTL 257
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASR--SAVCC-VEFHPFGSSLVAAGCADKKAYAYDVR 220
DGT+++WD D CV + +R S C +E H +VA G D + + +DV
Sbjct: 258 DGTVRLWDYMRD--ICVRSYSGHVNRKFSMQCAFLEQHWNKQPVVACGSEDSRIFMWDVG 315
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWN 260
+ V GH V + L+ +G++ +K+W
Sbjct: 316 TQ-EVASVLTGHDHPVLALAAHPTCALMVSGSNRDIKMWT 354
>gi|383848646|ref|XP_003699959.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Megachile
rotundata]
Length = 870
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRVL +G D V + + K+ I H + V + + + ++ A GS G +++
Sbjct: 30 SGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTP-IECVRFGQTEDLVCA-GSQTGALKI 87
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K T+ + ++ + C++FHP+G L+A+G D +D+R+ + +
Sbjct: 88 WD--LEHAKLARTL--TGHKAGIRCMDFHPYGE-LLASGSLDTAIKLWDIRRK-GCIFTY 141
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V ++F D + +AG +G +KLW++ R +R + H V H
Sbjct: 142 KGHNRMVNSLKFSPDGQWIASAGEEGMVKLWDLRAGRQLREFSEHRGPATTVEFHP--HE 199
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS +D+
Sbjct: 200 FLLASGSADRTAHFWDL 216
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 84 VDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR 143
++H+K+ A + + + P G +L SG D + +D+ +K IF H R
Sbjct: 90 LEHAKLARTLTGHKAGIRCMDFHP--YGELLASGSLDTAIKLWDIRRKGCIFTYKGHN-R 146
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
V S+ +S D AS ++G +++WD R G+ + S R VEFHP
Sbjct: 147 MVNSLKFSP-DGQWIASAGEEGMVKLWDLR--AGRQLREF--SEHRGPATTVEFHPH-EF 200
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND 263
L+A+G AD+ A+ +D+ H + + F + AG LK++
Sbjct: 201 LLASGSADRTAHFWDLESFQLVSSTEQSHSSAIRCLYFSQGGECLFAGCHDVLKVYGWEP 260
Query: 264 SRVI 267
R +
Sbjct: 261 GRTL 264
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+G DD + +W C+ ++ S + + CV F LV AG +D+
Sbjct: 36 TGGDDKKVNLW--AVGKQNCIMSL--SGHTTPIECVRFGQ-TEDLVCAGSQTGALKIWDL 90
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ GH+ + + F L+ +G+ D +KLW++ I TYKGH NR
Sbjct: 91 -EHAKLARTLTGHKAGIRCMDFHPYGELLASGSLDTAIKLWDIRRKGCIFTYKGH--NRM 147
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
L G + E V ++D+R G
Sbjct: 148 VNSLKFSPDGQWIASAGEEGMVKLWDLRAG 177
>gi|414076828|ref|YP_006996146.1| WD-40 domain-containing serine/threonine protein kinase [Anabaena
sp. 90]
gi|413970244|gb|AFW94333.1| WD-40 domain-containing serine/threonine protein kinase [Anabaena
sp. 90]
Length = 580
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 124/275 (45%), Gaps = 28/275 (10%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD N R +++ A++ I F+ +D++ AT + + ++++K++ H +
Sbjct: 315 WDLNNRQLIANFFGHTQAITSVI----FNHNDTILATASDDQTMNLWDVKTLAKIHLLTG 370
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
HS SL + P G++L SG +D + +D+ + + H
Sbjct: 371 ---HSHAV----------KSLAFHP--QGQILASGSWDKTIKIWDVNTGLGLNTLTGHK- 414
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
++ +V +S +L AS S D T+++W + + GK S AV V F P G
Sbjct: 415 LQINAVAFSPQGRLL-ASASYDRTVRIW--QLEDGKFNLLTTLSGHTWAVLTVAFSPNGQ 471
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
++A G D +DV + + GH +V + F D +TL++ D +K+W +
Sbjct: 472 -ILATGSGDNTIKLWDVGTG-ELISTLSGHSWSVVAVAFSADGETLISGSWDKTVKIWQI 529
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
+ + I + GH ++ + V +S L+ GS+
Sbjct: 530 STKKEIASLVGHTDSVSSVAMS--HDAKLIASGSK 562
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASG D+ ++++WD + + ++ A+ V F+ +++A D+ +D
Sbjct: 304 ASGEDNKSIKLWD--LNNRQLIANF--FGHTQAITSVIFN-HNDTILATASDDQTMNLWD 358
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNR 277
V+ + + + GH V + F ++ +G+ D +K+W+VN + T GH
Sbjct: 359 VKTLA-KIHLLTGHSHAVKSLAFHPQGQILASGSWDKTIKIWDVNTGLGLNTLTGHKLQI 417
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
N V S G LL S V ++ + G+
Sbjct: 418 NAVAFS--PQGRLLASASYDRTVRIWQLEDGK 447
>gi|428215661|ref|YP_007088805.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
gi|428004042|gb|AFY84885.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 732
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S I + F P S A+ I+++ + + H + DH+ A +
Sbjct: 490 SHEIWSVTFSPDGSKVASSSGDGTIKVWETSTGKLLH---TLTDHA----------AWVM 536
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L SG +D + ++++ I H G V+S+ YS D L ASG
Sbjct: 537 SVAFSP--DGKQLASGGFDNTIKLWNVDSGELIRSIAGHSGW-VFSLAYSP-DGQLLASG 592
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D ++++W + G+ V T++ R V F P G VA D + V
Sbjct: 593 SFDRSIKIWHTQT--GEVVRTLEGGLYR--FRSVAFSPNGQ-WVAGASGDSSILIWQVSS 647
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAG--TDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V GH V I F D TLV+ G D LKLWN+ ++++T KGH + N
Sbjct: 648 G-QLVRTLFGHSDAVHAIAFSPDGQTLVSGGGSLDSTLKLWNIGTGQLLQTLKGHSDTIN 706
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVR 306
V +S G +L GS+ N + V+ ++
Sbjct: 707 SVSISA--DGKMLTSGSQDNTIKVWQLQ 732
>gi|428308955|ref|YP_007119932.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
gi|428250567|gb|AFZ16526.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 1252
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
V+G+ DY ++++ + + FE + RVWSV +S +L ASGS D T+++WD
Sbjct: 759 VIGTDDYKVILLDIHTGEHLKTFEGHTN---RVWSVAFSPQGNML-ASGSADHTVKLWDI 814
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
G+C++T++ R V + F P G ++A G D+ + V + + G+
Sbjct: 815 HT--GRCLNTLKEEGYR--VRSLAFTPDGK-ILATGSDDQSVSLWSVPEG-KRLKSLQGY 868
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
+ V + F D TLV+ D L+LW+VN ++T GH V S G +
Sbjct: 869 TQRVWSVAFSPDGQTLVSGSDDQKLRLWDVNTGECLQTLSGHKGRVRSVAFS--PDGDTI 926
Query: 292 GCGSETNQVFVYDVRWGE 309
S ++ ++DV G+
Sbjct: 927 ASASNDQKIKLWDVSTGK 944
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G +L SG D V +D+ + E G RV S+ ++ +L A+GSDD ++ +
Sbjct: 796 QGNMLASGSADHTVKLWDIHTGRCLNTLKEEG-YRVRSLAFTPDGKIL-ATGSDDQSVSL 853
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W GK + ++Q R V V F P G +LV+ G D+K +DV + +
Sbjct: 854 WS--VPEGKRLKSLQGYTQR--VWSVAFSPDGQTLVS-GSDDQKLRLWDVNTG-ECLQTL 907
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH+ V + F D DT+ +A D +KLW+V+ + T GH + + + S + G
Sbjct: 908 SGHKGRVRSVAFSPDGDTIASASNDQKIKLWDVSTGKCRLTLSGHKDWVSSLAFS--QDG 965
Query: 289 GLLGCGSETNQVFVYDVRWGE 309
L S+ V ++DV G+
Sbjct: 966 TKLVSASDDKTVRLWDVSTGQ 986
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 68/280 (24%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPA-KLSSLKWK 106
+ F P ++ A+G +++++I H+ C + ++ SL +
Sbjct: 791 VAFSPQGNMLASGSADHTVKLWDI--------------HTGRCLNTLKEEGYRVRSLAFT 836
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P G++L +G D V + + + + + +RVWSV +S L SGSDD
Sbjct: 837 P--DGKILATGSDDQSVSLWSVPEGKRLKSLQGYT-QRVWSVAFSPDGQTL-VSGSDDQK 892
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD + G+C+ T+ S + V V F P G + +A+ D+K +DV
Sbjct: 893 LRLWD--VNTGECLQTL--SGHKGRVRSVAFSPDGDT-IASASNDQKIKLWDV-STGKCR 946
Query: 227 LVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV------------------------ 261
L GH+ V+ + F D LV+A D ++LW+V
Sbjct: 947 LTLSGHKDWVSSLAFSQDGTKLVSASDDKTVRLWDVSTGQYLKTIGEHGDWVWSVAVSPD 1006
Query: 262 ------------------NDSRVIRTYKGHVNNRNFVGLS 283
N + T +GH N V S
Sbjct: 1007 GSILANTSENKTVWLWDINTGECLHTLQGHTNKVRTVAFS 1046
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 29/287 (10%)
Query: 24 DFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAV 83
D N R + + S + + DSI + ++ ATG KI ++ + + +
Sbjct: 558 DVNFRNS-NLDKSVFSEIFDSILSVAISSDGTLLATGDTDNKIHVWRVAD---EQLLFTC 613
Query: 84 VDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR 143
H+ +P G++L SG D V +D + H
Sbjct: 614 ERHANWVRAVAFSP------------DGKILASGSTDQTVRLWDASNGKCLKTLQGHTNW 661
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
+WS+ +S +L ASGSDD T+++W+ G+ + T+ P S V V F S+
Sbjct: 662 -IWSLSFSSDSQIL-ASGSDDKTVRLWN--VSTGERLQTL-PEHSH-WVRSVAFGSDSST 715
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV--TYIRFLDVDTLVTAGTDGCLKLWNV 261
LV+A D+ +D+R L R V + LD + LV D + L ++
Sbjct: 716 LVSASV-DQIVRLWDIR--TGECLEHWQERNHVVRSIACRLDENKLVIGTDDYKVILLDI 772
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ ++T++GH N V S G +L GS + V ++D+ G
Sbjct: 773 HTGEHLKTFEGHTNRVWSVAFS--PQGNMLASGSADHTVKLWDIHTG 817
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 133 PIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAV 192
P + GG V ++ + + ASGSDD T+++WD C G+C+ +Q ++ +
Sbjct: 1080 PYLQGKGAGGLGFSDVLHATENHYILASGSDDQTVRLWDV-CT-GECLQILQGHTNQ--I 1135
Query: 193 CCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAG 251
V F P G +VA+G D+ ++V + + GH K+V + + + TL +
Sbjct: 1136 RSVAFSPNG-QIVASGSDDQTVKLWNVCDG-KCLQMLHGHTKSVWSVHWSPNGHTLASGS 1193
Query: 252 TDGCLKLWNVNDSRVIRTYKG 272
D +K+W+V + +RT +
Sbjct: 1194 EDETIKIWDVTTAECLRTLRA 1214
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVF--DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
+L+A G D K + + ++ D L+F + H V + F D L + TD ++LW
Sbjct: 588 TLLATGDTDNKIHVW---RVADEQLLFTCERHANWVRAVAFSPDGKILASGSTDQTVRLW 644
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV 319
+ ++ + ++T +GH N LS +L GS+ V +++V G E +
Sbjct: 645 DASNGKCLKTLQGHTN--WIWSLSFSSDSQILASGSDDKTVRLWNVSTG--------ERL 694
Query: 320 TAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+V SV + G D TLV+ D ++ ++
Sbjct: 695 QTLPEHSHWVRSVAF---GSDSSTLVSASVDQIVRLW 728
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVN 262
++A+G D+ +DV + + + GH + + F +V +G+D +KLWNV
Sbjct: 1104 ILASGSDDQTVRLWDV-CTGECLQILQGHTNQIRSVAFSPNGQIVASGSDDQTVKLWNVC 1162
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWR-----HGGLLGCGSETNQVFVYDVRWGE 309
D + ++ GH SVW +G L GSE + ++DV E
Sbjct: 1163 DGKCLQMLHGHTK-------SVWSVHWSPNGHTLASGSEDETIKIWDVTTAE 1207
>gi|440696814|ref|ZP_20879262.1| trypsin [Streptomyces turgidiscabies Car8]
gi|440280845|gb|ELP68526.1| trypsin [Streptomyces turgidiscabies Car8]
Length = 1389
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 127/324 (39%), Gaps = 75/324 (23%)
Query: 23 WD---FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHP 79
WD F RTT+ ++ + F+ S+ ATG + + ++++++ P
Sbjct: 798 WDAKTFKFRTTLGGHDG-------AVNALAFNRDGSILATGSDDKTVLLWDVET---RKP 847
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
+ + H+ + +P GR L +G D V+ +D+E + PI +
Sbjct: 848 IATLKKHTGAVNAVAFSP------------DGRTLATGSDDKTVLLWDVETRKPIATLKK 895
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H G V +V +S L A+GSDD T+ +WD D + + ++ +V V F P
Sbjct: 896 HSG-AVNAVAFSPDRDTL-ATGSDDKTVLLWD--LDSRRPRAKLKEHT--QSVTSVAFSP 949
Query: 200 FG---------------------------SSLVAAGCADKKAYAYDVRKMVDPVLVFD-- 230
G ++L+ A AD K +A + VD V+D
Sbjct: 950 DGHTLATADGYDAILRNAVSGKKRTVLYRTALMVAFSADSKTFATATDRFVD---VWDAA 1006
Query: 231 ---------GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
GH V + F D TL TAG D + LW+ S T GH + N +
Sbjct: 1007 TGALRTTLAGHHNVVLGLAFSRDSHTLATAGRDKVVGLWDPAASNNRTTLTGHSDAVNAM 1066
Query: 281 GLSVWRHGGLLGCGSETNQVFVYD 304
S G L S+ V ++D
Sbjct: 1067 AFSP--DGRALATASDDESVRLWD 1088
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 15/197 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR L + D V +D + + + +EH V +V D A+GSDD +++W
Sbjct: 1072 GRALATASDDESVRLWDPATRKALLKPEEH--TEVVNVVAFSPDGRTVATGSDDKYVRLW 1129
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV--RKMVDPVLV 228
D V+ + +AV V F P G +L A G K +D+ RK+
Sbjct: 1130 SAAADK----PPVKLTGRDAAVWSVAFSPDGRTL-ATGSDTKYIRLWDLATRKIRR---T 1181
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH V + F D TL TAG D + +W++ +V T GH N + S
Sbjct: 1182 LTGHHDGVNALEFSPDGRTLATAGGDSRVLIWDLATGKVRVTLTGHDAPVNALAFSP--D 1239
Query: 288 GGLLGCGSETNQVFVYD 304
G +L S+ V+D
Sbjct: 1240 GRVLATASDDGTARVWD 1256
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V +V +S L ++G+ G++++WD + K +T+ AV + F+ GS +
Sbjct: 774 VRAVAFSPDGHTLASAGAG-GSVRLWDAKT--FKFRTTL--GGHDGAVNALAFNRDGS-I 827
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A G DK +DV + P+ H V + F D TL T D + LW+V
Sbjct: 828 LATGSDDKTVLLWDV-ETRKPIATLKKHTGAVNAVAFSPDGRTLATGSDDKTVLLWDVET 886
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+ I T K H N V S R L GS+ V ++D+
Sbjct: 887 RKPIATLKKHSGAVNAVAFSPDRD--TLATGSDDKTVLLWDL 926
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 22/164 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D + +EF P AT G ++ I+++ + KV A +++
Sbjct: 1187 DGVNALEFSPDGRTLATAGGDSRVLIWDLAT-------------GKVRVTLTGHDAPVNA 1233
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGAS 160
L + P GRVL + DG +D +H G W ++D+S L +
Sbjct: 1234 LAFSP--DGRVLATASDDGTARVWDAVTGRARSILTKHVG---WLSALDFSPDGRTLATA 1288
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
G DGT+++WD D G V++ + S V + F P G +L
Sbjct: 1289 GGYDGTVRLWD--ADTGSAVNSFVGANYPSGVSSLVFSPDGRTL 1330
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH V + F D TL +AG G ++LW+ + T GH N L+ R
Sbjct: 767 LTGHTDEVRAVAFSPDGHTLASAGAGGSVRLWDAKTFKFRTTLGGHDGAVN--ALAFNRD 824
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G +L GS+ V ++D V +P+ G V++V + D TL G
Sbjct: 825 GSILATGSDDKTVLLWD--------VETRKPIATLKKHTGAVNAVAF---SPDGRTLATG 873
Query: 348 GSDGLLHVF-VGKKKPLS 364
D + ++ V +KP++
Sbjct: 874 SDDKTVLLWDVETRKPIA 891
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 29/221 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P ATG + IR++++ + + + D +++L++ P
Sbjct: 1150 VAFSPDGRTLATGSDTKYIRLWDLATRKIRRTLTGHHD-------------GVNALEFSP 1196
Query: 108 GTSGRVLGSGDYDGVVMEYDLEK---KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
GR L + D V+ +DL +V + D V ++ +S VL A+ SDD
Sbjct: 1197 --DGRTLATAGGDSRVLIWDLATGKVRVTLTGHDAP----VNALAFSPDGRVL-ATASDD 1249
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRKM 222
GT ++WD + + T + ++F P G +L AG D + + D
Sbjct: 1250 GTARVWDAVTGRARSILTKHVGW----LSALDFSPDGRTLATAGGYDGTVRLWDADTGSA 1305
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVND 263
V+ + + + + D TL T+ DG ++LW V D
Sbjct: 1306 VNSFVGANYPSGVSSLVFSPDGRTLATSSEDGTVRLWVVRD 1346
>gi|358382144|gb|EHK19817.1| hypothetical protein TRIVIDRAFT_68192 [Trichoderma virens Gv29-8]
Length = 637
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 31/300 (10%)
Query: 8 QQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIR 67
QQ + + + + R WD N + + N+ V+ I F P+ A+G IR
Sbjct: 184 QQLASGSADAKVRV-WDANSGACLQTLKGHNSPVNSVI----FSPNSQWLASGSSDNTIR 238
Query: 68 IYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYD 127
+++ + + + H+ + +P +G+ L SG +G + +D
Sbjct: 239 VWDAN---LGAYLQTLESHNDWVLLVVFSP------------NGQRLASGSSNGTIKVWD 283
Query: 128 LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSA 187
+ + + H +V SV +S L ASGSDD T+++WD + G C+ T++
Sbjct: 284 VNSGACLQTLEGHN-DQVNSVIFSPDGQRL-ASGSDDKTVRVWD--ANSGTCLQTLE--G 337
Query: 188 SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
+ V V F P G L A+G D +D + +GH +V + F +
Sbjct: 338 HNNCVNSVVFSPDGQRL-ASGSYDSTVRVWDANSGA-CLQTLEGHTSSVYSVAFSPNGQR 395
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
L + D +++W+VN ++T +GH + N V S G L GS N + V+D
Sbjct: 396 LASGSNDNTVRVWDVNSGAYLQTLEGHNDQVNSVIFS--PDGQRLASGSSDNTIRVWDAN 453
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 112/307 (36%), Gaps = 67/307 (21%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P A+G IR+++ S + + H+ I +P
Sbjct: 47 VNSVVFSPDSQRLASGSSDNTIRVWDANS---GARLQTLEGHNDGVFSVIFSP------- 96
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+G+ L SG YD + +D + + H RV SV +S L + DD
Sbjct: 97 -----NGQWLASGSYDETIKVWDANSGACLQTLEGHN-DRVLSVIFSPDGQRLASGSLDD 150
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
G +++WD + G C+ T++ +V V F P G L A+G AD K +D
Sbjct: 151 GIIRVWD--ANSGACLQTLE--GYDCSVSSVVFSPNGQQL-ASGSADAKVRVWDANSGA- 204
Query: 225 PVLVFDGHRKTVT------------------YIRFLDVDT-------------------- 246
+ GH V IR D +
Sbjct: 205 CLQTLKGHNSPVNSVIFSPNSQWLASGSSDNTIRVWDANLGAYLQTLESHNDWVLLVVFS 264
Query: 247 -----LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVF 301
L + ++G +K+W+VN ++T +GH + N V S G L GS+ V
Sbjct: 265 PNGQRLASGSSNGTIKVWDVNSGACLQTLEGHNDQVNSVIFS--PDGQRLASGSDDKTVR 322
Query: 302 VYDVRWG 308
V+D G
Sbjct: 323 VWDANSG 329
>gi|119486195|ref|ZP_01620255.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
gi|119456686|gb|EAW37815.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
Length = 1368
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 105 WKPGTS----GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
W G S G++L + D V +DL I EH V V +S D L A+
Sbjct: 837 WVNGVSFSPDGKLLATASGDNTVKLWDLSTGKVIKMLTEHTNS-VNGVSFSP-DGKLLAT 894
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D T+++WD GK + T+ + ++V V F P G L+A D +D
Sbjct: 895 TSGDNTVKLWD--ASTGKEIKTL--TGHTNSVNGVSFSPDGK-LLATASGDNTVKLWDAS 949
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + GH V + F L TA D +KLW+ + + I+T GH N + +
Sbjct: 950 TGKE-IKTLTGHTNWVNGVSFSPDGKLATASADNTVKLWDASTGKEIKTLTGHTN--SVI 1006
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
G+S G LL S N V ++D G+ +
Sbjct: 1007 GVSFSPDGKLLATASGDNTVKLWDASTGKEI 1037
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L A+ S D T+++WD GK + T+ + + V V F P G L+A G D
Sbjct: 1013 DGKLLATASGDNTVKLWD--ASTGKEIKTL--TGHTNWVNGVSFSPDGK-LLATGSGDNT 1067
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+D + + GH +V + F L TA D +KLW+ + + I+T GH
Sbjct: 1068 VKLWDASTGKE-IKTLTGHTNSVNGVSFSPDGKLATASADNTVKLWDASTGKEIKTLTGH 1126
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
N + +G+S G LL S N V ++D G+ +
Sbjct: 1127 TN--SVIGVSFSPDGKLLATTSGDNTVKLWDASTGKEI 1162
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 141 GGRRVW--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
GG W +V +S D L A+ S D T+++WD GK + T+ + ++V V F
Sbjct: 748 GGHVNWVRAVSFSP-DGKLLATASGDNTVKLWD--ASTGKEIKTL--TGHTNSVNGVSFS 802
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLK 257
P G L+A D +D + + GH V + F D L TA D +K
Sbjct: 803 PDG-KLLATASGDNTVKLWDASTGKE-IKTLTGHTNWVNGVSFSPDGKLLATASGDNTVK 860
Query: 258 LWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
LW+++ +VI+ H N+ N G+S G LL S N V ++D G+ +
Sbjct: 861 LWDLSTGKVIKMLTEHTNSVN--GVSFSPDGKLLATTSGDNTVKLWDASTGKEI 912
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L A+ S D T+++WD GK + T+ + ++V V F P G L+A DK
Sbjct: 1138 DGKLLATTSGDNTVKLWD--ASTGKEIKTL--TGHTNSVNGVSFSPDGK-LLATASGDKT 1192
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV---------DTLVTAGTDGCLKLWNVNDS 264
+D + + GH V + F V TL TA D +KLW+ +
Sbjct: 1193 VKLWDASTGKE-IKTLSGHTHWVNGVSFSPVGASLPSGIGKTLATASGDNTVKLWDASTG 1251
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ I+T GH N+ N G+S G L S N V +++ G+ +
Sbjct: 1252 KEIKTLTGHTNSVN--GVSFSPDGKTLATASGDNTVKLWNASTGKEI 1296
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 88/221 (39%), Gaps = 27/221 (12%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L + D V +D I H V V +S D L A+ S D T+++W
Sbjct: 1139 GKLLATTSGDNTVKLWDASTGKEIKTLTGHTNS-VNGVSFSP-DGKLLATASGDKTVKLW 1196
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL-------VAAGCADKKAYAYDVRKMV 223
D GK + T+ S V V F P G+SL +A D +D
Sbjct: 1197 D--ASTGKEIKTL--SGHTHWVNGVSFSPVGASLPSGIGKTLATASGDNTVKLWDASTGK 1252
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ + GH +V + F D TL TA D +KLWN + + I+T GH + V
Sbjct: 1253 E-IKTLTGHTNSVNGVSFSPDGKTLATASGDNTVKLWNASTGKEIKTLTGHTHWVRAVSF 1311
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
S G L SE N V +W DF+ + G
Sbjct: 1312 S---PDGKLATASEDNTV---------KLWQLDFDYLVQEG 1340
>gi|427728295|ref|YP_007074532.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
gi|427364214|gb|AFY46935.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
Length = 598
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 28/273 (10%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPA 98
AA +DS+ + + + + I+++N+K+ V + D I
Sbjct: 310 AAHTDSVWSVVLSNNGQTLVSASADKTIKVWNLKTSQVIRTLEGHTD--------IVRTI 361
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
LS+ G+ L SG D + ++ + + G VWSV S ++
Sbjct: 362 ALSA-------DGQTLVSGSGDKTIKIWNFQTGELMTTLTTDSGP-VWSVAISHDGQIM- 412
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SGS+DG++++W+ GK + T++ A R V V P G + VA G DK +D
Sbjct: 413 VSGSEDGSIKVWN--LYTGKILHTIKAHAGR--VFSVAISPDGKT-VATGGIDKTIKIWD 467
Query: 219 VR--KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
++ K++ + ++V + R D TLV+A D +K+WN + + RT GH +
Sbjct: 468 LQTGKLLCAIAQHQDAVRSVIFSR--DGKTLVSASWDQTIKIWNPDTGELRRTLTGHTS- 524
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V LS+ G L GS N V ++D++ G+
Sbjct: 525 -RVVTLSLGIDGKTLASGSLDNHVKIWDMQTGK 556
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
TLV+A D +K+WN+ S+VIRT +GH + + LS G L GS + +++
Sbjct: 326 QTLVSASADKTIKVWNLKTSQVIRTLEGHTDIVRTIALSA--DGQTLVSGSGDKTIKIWN 383
Query: 305 VRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ G E +T ++ G V SV + D +V+G DG + V+
Sbjct: 384 FQTG--------ELMTTLTTDSGPVWSVA---ISHDGQIMVSGSEDGSIKVW 424
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+++ SG DG + ++L + H GR V+SV S + A+G D T+++W
Sbjct: 409 GQIMVSGSEDGSIKVWNLYTGKILHTIKAHAGR-VFSVAISPDGKTV-ATGGIDKTIKIW 466
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVF 229
D GK + + + + AV V F G +LV+A K + D ++
Sbjct: 467 D--LQTGKLLCAI--AQHQDAVRSVIFSRDGKTLVSASWDQTIKIWNPDTGELRR---TL 519
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GH V + +D TL + D +K+W++ +++ T GH
Sbjct: 520 TGHTSRVVTLSLGIDGKTLASGSLDNHVKIWDMQTGKLLHTLSGH 564
>gi|156051526|ref|XP_001591724.1| hypothetical protein SS1G_07170 [Sclerotinia sclerotiorum 1980]
gi|154704948|gb|EDO04687.1| hypothetical protein SS1G_07170 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 334
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 34/295 (11%)
Query: 18 RARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD 77
R R W L+T SDS+ + F P + A+G + IR+++
Sbjct: 3 RTRSNWSAALQTL--------EGHSDSVRSVAFSPDGTKVASGSYDQTIRLWD------- 47
Query: 78 HPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFER 137
A + + + ++ ++S+ + P G + SG +D + +D +
Sbjct: 48 ---AATGESLQTLEGHL---GSVTSVAFSP--DGTKVASGSHDKTIRLWDAATGESLQTL 99
Query: 138 DEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEF 197
+ H V+SV +S D ASGS D T+++WD G+ + T++ ++R V V F
Sbjct: 100 EGH-SDWVFSVAFSP-DGTKVASGSLDKTIRLWDAIT--GESLQTLEGHSNR--VSSVAF 153
Query: 198 HPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCL 256
P G+ VA+G DK +D + + +GH V+ + F T V +G+ D +
Sbjct: 154 SPDGTK-VASGSLDKTIRLWDA-ITGESLQTLEGHSNRVSSVAFSPDGTKVASGSDDKTI 211
Query: 257 KLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+LW+ ++T +GH N V S G + GSE + ++D GE +
Sbjct: 212 RLWDAITGESLQTLEGHSGWVNSVAFS--PDGTKVASGSEDKTIRLWDAITGESL 264
>gi|317159442|ref|XP_001827318.2| NACHT and WD40 domain protein [Aspergillus oryzae RIB40]
Length = 1204
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 33/246 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S S+ + F P A+G + I++++ K+ D + HS +
Sbjct: 926 SSSVLSVAFSPDGQTIASGSSDKTIKLWDAKT---DTELQTFKGHSD----------GVR 972
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ + P G+ + SG YD + +D + ++ F+ G R SV +S + A
Sbjct: 973 SVAFSP--DGQTIASGSYDRTIKLWDPKTGTELQTFKGHSDGVR---SVAFSPDGQTI-A 1026
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WDP+ G + T + V V F P G + +A+G DK +D
Sbjct: 1027 SGSYDRTIKLWDPKT--GTELQTFK--GHSDGVRSVAFSPDGQT-IASGSYDKTIKLWDA 1081
Query: 220 RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH----- 273
R + + GH V + F D T+ + D +KLW+ ++T KGH
Sbjct: 1082 RTGTE-LQTLKGHSDGVRSVAFSRDGQTIASGSYDKTIKLWDARTGTELQTLKGHSVSSV 1140
Query: 274 VNNRNF 279
+N NF
Sbjct: 1141 MNEPNF 1146
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 65/242 (26%), Positives = 105/242 (43%), Gaps = 24/242 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ + SG D + +D + + + H V SV +S + ASGS D T+++W
Sbjct: 896 GQTIASGSSDTTIKLWDAKTGMELQTFKGHSSS-VLSVAFSPDGQTI-ASGSSDKTIKLW 953
Query: 171 DPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D + D + +Q S V V F P G + +A+G D+ +D + + + F
Sbjct: 954 DAKTD-----TELQTFKGHSDGVRSVAFSPDGQT-IASGSYDRTIKLWDPKTGTE-LQTF 1006
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V + F D T+ + D +KLW+ ++T+KGH + V S G
Sbjct: 1007 KGHSDGVRSVAFSPDGQTIASGSYDRTIKLWDPKTGTELQTFKGHSDGVRSVAFS--PDG 1064
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
+ GS + ++D R G E T G G V SV + R G+ T+ +G
Sbjct: 1065 QTIASGSYDKTIKLWDARTGT-------ELQTLKGHSDG-VRSVAFSRDGQ---TIASGS 1113
Query: 349 SD 350
D
Sbjct: 1114 YD 1115
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV +S + ASGS D T+++WD + G + T + S+V V F P G +
Sbjct: 887 VLSVAFSPDGQTI-ASGSSDTTIKLWDAKT--GMELQTFK--GHSSSVLSVAFSPDGQT- 940
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A+G +DK +D + + + F GH V + F D T+ + D +KLW+
Sbjct: 941 IASGSSDKTIKLWDAKTDTE-LQTFKGHSDGVRSVAFSPDGQTIASGSYDRTIKLWDPKT 999
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
++T+KGH + V S G + GS + ++D + G
Sbjct: 1000 GTELQTFKGHSDGVRSVAFS--PDGQTIASGSYDRTIKLWDPKTG 1042
Score = 47.8 bits (112), Expect = 0.009, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
S+V V F P G + +A+G +D +D + ++ + F GH +V + F D T+
Sbjct: 885 SSVLSVAFSPDGQT-IASGSSDTTIKLWDAKTGME-LQTFKGHSSSVLSVAFSPDGQTIA 942
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ +D +KLW+ ++T+KGH + V S G + GS + ++D + G
Sbjct: 943 SGSSDKTIKLWDAKTDTELQTFKGHSDGVRSVAFS--PDGQTIASGSYDRTIKLWDPKTG 1000
>gi|389748409|gb|EIM89586.1| WD40 repeat-like protein [Stereum hirsutum FP-91666 SS1]
Length = 1333
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 25/280 (8%)
Query: 35 SSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYI 94
S P D++ + F P + +G R IR+++++S +V +
Sbjct: 958 SKPFEGHIDNVWSVAFSPDGTKIVSGSSDRTIRMWDVES------------GEEVSKPFK 1005
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
+SS+ + P G + SG +D + +D+E + + + + SV +S D
Sbjct: 1006 GHTESVSSVAFSP--DGTKIVSGSFDQTIRMWDVENGEEVLKPFKGHTDSICSVAFSP-D 1062
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADKK 213
SGS D T+++WD + GK V ++P + ++C V F P G+ +V+ G +D+
Sbjct: 1063 GTKIVSGSYDHTIRVWD--VESGKEV--LKPFEGHTDSICSVAFWPDGTKIVS-GSSDRT 1117
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGC-LKLWNVNDSR-VIRTYK 271
+DV + F+GH V + F T + +G+ C +++W+V + V++ ++
Sbjct: 1118 IRMWDVESGEEVSKPFEGHTSIVNSVTFSPDGTKIVSGSSDCTVRVWDVESGKEVLKPFE 1177
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
GH + V S G + GS + + V+DV G+ V
Sbjct: 1178 GHTESVRSVAFS--PDGTNIVSGSYDHTIRVWDVESGKEV 1215
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 27/281 (9%)
Query: 35 SSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYY 93
S P +DSI + F P + +G R IR+++++S V P +D+
Sbjct: 915 SKPFEGHTDSICSVAFSPDGTKIVSGSTDRTIRVWDVESGKEVSKPFEGHIDN------- 967
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
+ S+ + P G + SG D + +D+E + + + V SV +S
Sbjct: 968 ------VWSVAFSP--DGTKIVSGSSDRTIRMWDVESGEEVSKPFKGHTESVSSVAFSP- 1018
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADK 212
D SGS D T++MWD + G+ V ++P + ++C V F P G+ +V +G D
Sbjct: 1019 DGTKIVSGSFDQTIRMWD--VENGEEV--LKPFKGHTDSICSVAFSPDGTKIV-SGSYDH 1073
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVND-SRVIRTY 270
+DV + + F+GH ++ + F D +V+ +D +++W+V V + +
Sbjct: 1074 TIRVWDVESGKEVLKPFEGHTDSICSVAFWPDGTKIVSGSSDRTIRMWDVESGEEVSKPF 1133
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+GH + N V S G + GS V V+DV G+ V
Sbjct: 1134 EGHTSIVNSVTFS--PDGTKIVSGSSDCTVRVWDVESGKEV 1172
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEFH 198
H V SV +S D SGS + T++MWD + G+ VS +P + ++C V F
Sbjct: 877 HIPNPVLSVAFSP-DGTKIVSGSIEHTLRMWD--VESGEEVS--KPFEGHTDSICSVAFS 931
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLK 257
P G+ +V +G D+ +DV + F+GH V + F D +V+ +D ++
Sbjct: 932 PDGTKIV-SGSTDRTIRVWDVESGKEVSKPFEGHIDNVWSVAFSPDGTKIVSGSSDRTIR 990
Query: 258 LWNVND-SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF 316
+W+V V + +KGH + + V S G + GS + ++DV GE V
Sbjct: 991 MWDVESGEEVSKPFKGHTESVSSVAFS--PDGTKIVSGSFDQTIRMWDVENGEEV----L 1044
Query: 317 EPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHV 355
+P +G S+C D +V+G D + V
Sbjct: 1045 KPF------KGHTDSICSVAFSPDGTKIVSGSYDHTIRV 1077
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 25/243 (10%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYIC 95
P +DSI + F P + +G IR+++++S V P D IC
Sbjct: 1046 PFKGHTDSICSVAFSPDGTKIVSGSYDHTIRVWDVESGKEVLKPFEGHTDS-------IC 1098
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
+ A W GT + SG D + +D+E + + E V SV +S D
Sbjct: 1099 SVAF-----WPDGTK---IVSGSSDRTIRMWDVESGEEVSKPFEGHTSIVNSVTFSP-DG 1149
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKA 214
SGS D T+++WD + GK V ++P +V V F P G+++V+ G D
Sbjct: 1150 TKIVSGSSDCTVRVWD--VESGKEV--LKPFEGHTESVRSVAFSPDGTNIVS-GSYDHTI 1204
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSR-VIRTYKG 272
+DV + F+GH V + F T + +G+ D +++W+V + V + ++G
Sbjct: 1205 RVWDVESGKEVSKPFNGHTSIVNSVAFSPDGTKIASGSFDRTIRVWDVESGKEVSKPFEG 1264
Query: 273 HVN 275
N
Sbjct: 1265 PTN 1267
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 22/223 (9%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICT 96
P +DSI + F P + +G R IR+++++S +V +
Sbjct: 1089 PFEGHTDSICSVAFWPDGTKIVSGSSDRTIRMWDVES------------GEEVSKPFEGH 1136
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+ ++S+ + P G + SG D V +D+E + + E V SV +S D
Sbjct: 1137 TSIVNSVTFSP--DGTKIVSGSSDCTVRVWDVESGKEVLKPFEGHTESVRSVAFSP-DGT 1193
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
SGS D T+++WD + GK VS +P + S V V F P G+ +A+G D+
Sbjct: 1194 NIVSGSYDHTIRVWD--VESGKEVS--KPFNGHTSIVNSVAFSPDGTK-IASGSFDRTIR 1248
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLK 257
+DV + F+G VT FL D +V+ DG ++
Sbjct: 1249 VWDVESGKEVSKPFEGPTNYVTTSAFLPDGMKVVSGSKDGGIE 1291
>gi|350589031|ref|XP_003482771.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Sus scrofa]
Length = 118
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ VIEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S +
Sbjct: 2 LSVIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKISCIS 55
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L ASGS
Sbjct: 56 W-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLASGS 111
Query: 163 DDG 165
DD
Sbjct: 112 DDA 114
>gi|213405955|ref|XP_002173749.1| transcription factor TFIID complex subunit Taf5
[Schizosaccharomyces japonicus yFS275]
gi|212001796|gb|EEB07456.1| transcription factor TFIID complex subunit Taf5
[Schizosaccharomyces japonicus yFS275]
Length = 641
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 108/264 (40%), Gaps = 13/264 (4%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ EF P ++ A G IR+++I+S +D + +
Sbjct: 327 SMNCAEFSPDTTMIAAGFTESYIRLWSIRSDKKSSGKANSLDEGITSTRLLSHSGPVYGT 386
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P R L S D + ++ K + H G +W V + A+ S
Sbjct: 387 TFSP--DNRHLLSCSEDRSARLWSVDTKTALVAYKGHTGP-IWDVAFGPFGHYF-ATASH 442
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T Q+W CD + + S V CV FHP S+ V G +DK +DV +
Sbjct: 443 DQTAQLWS--CDHIYPLRIF--AGHLSDVDCVTFHP-NSAYVLTGSSDKTCRLWDVHRG- 496
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
V VF+GH V + D T+ +A DG + LW++ R I+T +GH + L
Sbjct: 497 HSVRVFNGHTHPVNAVAIAPDGHTMASAADDGIIHLWDLGSGRRIKTMRGHKG--SVYSL 554
Query: 283 SVWRHGGLLGCGSETNQVFVYDVR 306
S + +L G V V+DV+
Sbjct: 555 SFSKESTILVSGGADCTVRVWDVK 578
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 16/171 (9%)
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-D 253
V F PFG A D+ A + + P+ +F GH V + F V G+ D
Sbjct: 428 VAFGPFGHYF-ATASHDQTAQLWSCDHIY-PLRIFAGHLSDVDCVTFHPNSAYVLTGSSD 485
Query: 254 GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV 313
+LW+V+ +R + GH + N V ++ G + ++ + ++D+ G +
Sbjct: 486 KTCRLWDVHRGHSVRVFNGHTHPVNAVAIAP--DGHTMASAADDGIIHLWDLGSGRRI-- 541
Query: 314 HDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKKPLS 364
+ RG SV ++ LV+GG+D + V+ KK S
Sbjct: 542 ---------KTMRGHKGSVYSLSFSKESTILVSGGADCTVRVWDVKKTAAS 583
>gi|158339297|ref|YP_001520474.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158309538|gb|ABW31155.1| WD-repeat protein [Acaryochloris marina MBIC11017]
Length = 1210
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T + + SL + P G++L + D +G +D+ + G V SV ++
Sbjct: 566 TFSSILSLAFSP--DGQLLAASDTNGECHLWDVADGQLLLTLP--GVDWVRSVAFNTNGK 621
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
+L ASG DD + WD + G+C+ T+Q R VC + F P G +LV++ D+
Sbjct: 622 LL-ASGGDDYKIVFWDIQT--GQCLKTLQEHTGR--VCALMFSPNGQALVSSS-EDQTIR 675
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
++V + + GH + + ++F + LV+ G D +K+W+V + + T+ GH
Sbjct: 676 LWEVNSG-ECCAIMSGHTQQIWSVQFDPEGKRLVSGGEDKTVKIWDVQTGQCLNTFTGHT 734
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP---VTA 321
N V S G L+G S + +++ + GE +W F P + A
Sbjct: 735 NWIGSVAFS--PDGQLVGSASHDQTIRLWNAQTGECLQILKGHTNWIWSIAFSPDGQMLA 792
Query: 322 AGSE 325
+GSE
Sbjct: 793 SGSE 796
Score = 63.5 bits (153), Expect = 2e-07, Method: Composition-based stats.
Identities = 75/275 (27%), Positives = 130/275 (47%), Gaps = 29/275 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P S+ A+GG + IR++ + S LV A S+ + P L+
Sbjct: 824 VVFSPDQSMLASGGEDQTIRLWEM-SRLVSEEYSADSRTSQ-----LHWPLSARCLRTLQ 877
Query: 108 GTSGRVLG---SGDYDGVVMEYDLEKKVPIFERDEH--------GGRRVWSVDYSKGDPV 156
G + +V G S D + D EK + I+ + RR+ SVD+S D V
Sbjct: 878 GHTNQVWGIAFSPDGQRLASVGD-EKFIRIWHTETRICNQILVGHTRRISSVDWSP-DGV 935
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
ASG +D T+++WD + G C+ + S + V F P G+ ++A+G D+
Sbjct: 936 TLASGGEDQTVRLWDIKT--GSCLKIL--SGHTKQIWSVAFSPDGA-ILASGGEDQTIKL 990
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
+ V + D V +GH+ V + F V++L+ +G+ D +KLW++ +RT +GH
Sbjct: 991 WLVDRQ-DCVKTMEGHKNWVWSLDFNPVNSLLASGSFDHTVKLWDIETGDCVRTLEGH-- 1047
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVF-VYDVRWGE 309
+G++ G LL GS ++ +++V G+
Sbjct: 1048 QGWIMGVAFSPDGQLLASGSPYDKTIRIWEVLTGK 1082
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 78/369 (21%), Positives = 139/369 (37%), Gaps = 70/369 (18%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKS------------------VLVDHPVVAV 83
+ I ++FDP +GG + ++I+++++ D +V
Sbjct: 692 TQQIWSVQFDPEGKRLVSGGEDKTVKIWDVQTGQCLNTFTGHTNWIGSVAFSPDGQLVGS 751
Query: 84 VDHSKVCDYYICTPAK-LSSLK------WKPGTS--GRVLGSGDYDGVVMEYDLEKKVPI 134
H + + + L LK W S G++L SG D V +++ +
Sbjct: 752 ASHDQTIRLWNAQTGECLQILKGHTNWIWSIAFSPDGQMLASGSEDHTVRLWNVHTGECL 811
Query: 135 FERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW------------DPRCD------G 176
H RVWSV +S +L ASG +D T+++W D R
Sbjct: 812 KVLTGHT-HRVWSVVFSPDQSML-ASGGEDQTIRLWEMSRLVSEEYSADSRTSQLHWPLS 869
Query: 177 GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV 236
+C+ T+Q ++ V + F P G L + G + ++ + +LV GH + +
Sbjct: 870 ARCLRTLQGHTNQ--VWGIAFSPDGQRLASVGDEKFIRIWHTETRICNQILV--GHTRRI 925
Query: 237 TYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
+ + + D TL + G D ++LW++ ++ GH V S G +L G
Sbjct: 926 SSVDWSPDGVTLASGGEDQTVRLWDIKTGSCLKILSGHTKQIWSVAFS--PDGAILASGG 983
Query: 296 ETNQVFVYDV-------------RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDEC 342
E + ++ V W VW DF PV + + F +V + +C
Sbjct: 984 EDQTIKLWLVDRQDCVKTMEGHKNW---VWSLDFNPVNSLLASGSFDHTVKLWDIETGDC 1040
Query: 343 TLVAGGSDG 351
G G
Sbjct: 1041 VRTLEGHQG 1049
Score = 44.3 bits (103), Expect = 0.090, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 26/235 (11%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHS-KVCDYYICTPAKLS 101
D + + F+ + + A+GG KI ++I++ + + +H+ +VC
Sbjct: 609 DWVRSVAFNTNGKLLASGGDDYKIVFWDIQT---GQCLKTLQEHTGRVC----------- 654
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+L + P +G+ L S D + +++ H +++WSV + L SG
Sbjct: 655 ALMFSP--NGQALVSSSEDQTIRLWEVNSGECCAIMSGHT-QQIWSVQFDPEGKRL-VSG 710
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+D T+++WD + G+C++T + + + V F P G LV + D+ ++ +
Sbjct: 711 GEDKTVKIWDVQT--GQCLNTF--TGHTNWIGSVAFSPDGQ-LVGSASHDQTIRLWNAQT 765
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ + + GH + I F D L + D ++LWNV+ ++ GH +
Sbjct: 766 G-ECLQILKGHTNWIWSIAFSPDGQMLASGSEDHTVRLWNVHTGECLKVLTGHTH 819
>gi|67904196|ref|XP_682354.1| hypothetical protein AN9085.2 [Aspergillus nidulans FGSC A4]
gi|40742728|gb|EAA61918.1| hypothetical protein AN9085.2 [Aspergillus nidulans FGSC A4]
Length = 322
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 120/286 (41%), Gaps = 29/286 (10%)
Query: 34 SSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYY 93
SS + S + + FDP+ A+G + R I ++N + + +Y
Sbjct: 21 SSLTTSGHSGEVFAVRFDPTAQHIASGSMDRSILLWNT--------------YGQCENYG 66
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I + K + L + + + S D + +D+E I H + SV+ SK
Sbjct: 67 ILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHE-EVINSVEISKR 125
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
+ S SDDGTM +WDPR + + ++ +AV E + V +G D
Sbjct: 126 GQEMLVSASDDGTMGIWDPRQK--EAIDYLETELPITAVAQSE----AGNEVFSGGIDNA 179
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIR 268
+ +D+RK V GH T+T + D TL++ D ++ W++ +R IR
Sbjct: 180 IHVWDIRKKA-IVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIR 238
Query: 269 TYKGHV--NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
TY G +N + S G + GS V V+D + G+ ++
Sbjct: 239 TYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILY 284
>gi|427732410|ref|YP_007078647.1| hypothetical protein Nos7524_5331 [Nostoc sp. PCC 7524]
gi|427368329|gb|AFY51050.1| hypothetical protein Nos7524_5331 [Nostoc sp. PCC 7524]
Length = 762
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 24/264 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+S+ + F+P A+G I++++++ K+ + +
Sbjct: 417 SNSVVSVAFNPDGQTLASGSRDSTIKLWDVR-------------RGKLLQTFTGHSNSVI 463
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L SG D + +++ + H VWSV +S L ASG
Sbjct: 464 SVAFSP--DGQTLASGSLDKTIKLWNVRSGNLLQSFIGHSDW-VWSVAFSPDGQTL-ASG 519
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ R GK + T+ AS ++ + F P G +LV+ G D +DVR
Sbjct: 520 SRDCTIKLWNVRS--GKLLQTLTGHAS--SIYSIVFSPDGQTLVS-GSGDYTIKLWDVRS 574
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ ++ D TL + D +KLW+V ++++T GH N +
Sbjct: 575 GKLLQALSSHSSSALSVAFSPDGQTLASGSRDYTIKLWDVRRGKLLQTLTGHTGWVNSLA 634
Query: 282 LSVWRHGGLLGCGSETNQVFVYDV 305
S R+G L GS N + ++ +
Sbjct: 635 FS--RNGQTLASGSGDNTIKMWQL 656
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P + V GSGD + K + F + V SV ++ L ASG
Sbjct: 380 SVAFNPDSQTLVSGSGDKTIKLWNVRRGKLLQTFTGHSNS---VVSVAFNPDGQTL-ASG 435
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD R GK + T + ++V V F P G +L A+G DK ++VR
Sbjct: 436 SRDSTIKLWDVR--RGKLLQTF--TGHSNSVISVAFSPDGQTL-ASGSLDKTIKLWNVRS 490
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + F GH V + F D TL + D +KLWNV ++++T GH ++ +
Sbjct: 491 G-NLLQSFIGHSDWVWSVAFSPDGQTLASGSRDCTIKLWNVRSGKLLQTLTGHASSIYSI 549
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G L GS + ++DVR G+
Sbjct: 550 VFS--PDGQTLVSGSGDYTIKLWDVRSGK 576
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTA 250
V V F+P +LV+ G DK ++VR+ + F GH +V + F D TL +
Sbjct: 378 VWSVAFNPDSQTLVS-GSGDKTIKLWNVRRG-KLLQTFTGHSNSVVSVAFNPDGQTLASG 435
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
D +KLW+V ++++T+ GH N+ V S G L GS + +++VR G
Sbjct: 436 SRDSTIKLWDVRRGKLLQTFTGHSNSVISVAFS--PDGQTLASGSLDKTIKLWNVRSGN 492
>gi|410951315|ref|XP_003982343.1| PREDICTED: POC1 centriolar protein homolog A isoform 2 [Felis
catus]
Length = 359
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 125/311 (40%), Gaps = 36/311 (11%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIY--NIKSVLVDHPVVAVVDHSKVCDYYICT 96
A D++ + F PS + A+G + +RI+ N+K V + V + C
Sbjct: 58 AGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKG----ESTVFRAHTATVRSVHFC- 112
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+ G+ + D V + ++ +F +H V +S D
Sbjct: 113 ------------SDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHIN-WVRCARFSP-DGR 158
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L S SDD T+++WD +CV + V V+FHP G+ + AAG D
Sbjct: 159 LIVSASDDKTVKLWDK--TSRECVHSYCEHG--GFVTYVDFHPSGTCIAAAG-MDNTVKV 213
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+DVR + + H V + F + L+TA +D LK+ ++ + R++ T GH
Sbjct: 214 WDVRTH-RLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQG 272
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYD-----VRWGEPVWVHDFEPVTAAGSERGFVS 330
V S R G G QV V+ V +GE VH P T A S R
Sbjct: 273 PATTVAFS--RTGEYFASGGSDEQVMVWKSNFDVVDYGEVTKVHR-PPATLATSSRNLTV 329
Query: 331 SVCWRRVGEDE 341
S+ +R+ E
Sbjct: 330 SILEQRLTLTE 340
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 107/278 (38%), Gaps = 56/278 (20%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+ L SG D +M + ++ + + H V V++S +L ASGS D T+++W
Sbjct: 32 KQLASGSMDSCLMIWHMKPQSRAYRFAGHKDA-VTCVNFSPSGHLL-ASGSRDKTVRIWI 89
Query: 172 PRCDGGKCVSTVQPSASRSA--------------------------------------VC 193
P G V + RS V
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVR 149
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGT 252
C F P G +V+A DK +D + + V + H VTY+ F T + AG
Sbjct: 150 CARFSPDGRLIVSAS-DDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
D +K+W+V R+++ Y+ H N LS G L S + + + D+ G ++
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVN--ALSFHPSGNYLLTASSDSTLKILDLMEGRLLY 265
Query: 313 VHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
T G +G ++V + R GE +GGSD
Sbjct: 266 -------TLHG-HQGPATTVAFSRTGE---YFASGGSD 292
>gi|393231059|gb|EJD38656.1| HET-E, partial [Auricularia delicata TFB-10046 SS5]
Length = 501
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 110/248 (44%), Gaps = 21/248 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR L S D + +D E PI + RV SV YS D + SG+ D T+++W
Sbjct: 58 GRQLCSASNDRNIRRWDAESGAPIGKFMTSHSGRVHSVAYSS-DGMRIVSGAIDRTIRLW 116
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL-VF 229
D G ++++ A V CV P G+ +A+G +D +D D L
Sbjct: 117 DAPT-GNLLGASLEGHAG--WVWCVALSPDGT-CIASGSSDNTIRLWD--SATDAHLATL 170
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH V + FL D LV+ D +++WNVN R+ RT +GH R ++V G
Sbjct: 171 EGHTNAVCSLCFLPDRIHLVSGSMDRTVRIWNVNTRRLQRTLEGH--PRFVRSVAVSPSG 228
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
+ GS + V+D + GE V P+T G V D ++V+G
Sbjct: 229 RYIASGSSDRTIRVWDAQTGETV----GAPLT------GHTEPVFSVAFSPDGRSIVSGS 278
Query: 349 SDGLLHVF 356
DG + V+
Sbjct: 279 EDGTVRVW 286
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWK 106
+ PS A+G R IR+++ ++ V P+ H++ + S+ +
Sbjct: 222 VAVSPSGRYIASGSSDRTIRVWDAQTGETVGAPLTG---HTE----------PVFSVAFS 268
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + SG DG V +DL + + H V SV YS D SGSDD T
Sbjct: 269 P--DGRSIVSGSEDGTVRVWDLFYRSELEPMTGHSDS-VRSVAYSP-DGRCIVSGSDDHT 324
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD G+ + V + CV F P G+ ++A+G D +D R +
Sbjct: 325 VRLWDAST--GEALG-VPLEGHTGWLRCVAFSPDGA-IIASGSGDCTIRIWD-RTTGVHL 379
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
GH +V + F D LV+ D +++WNV ++ RT +GH + V +S
Sbjct: 380 ATLKGHSNSVYSLCFSSDRVHLVSGSLDNTVRIWNVATWQLERTLRGHSSAVYSVAIS-- 437
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPV 311
G + GS + ++D + GE V
Sbjct: 438 PSGRYIASGSYDETIRIWDAQTGEAV 463
>gi|356519544|ref|XP_003528432.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Glycine max]
Length = 712
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV + + VL SG+ G +++WD + K V T+ + +S VEFHPFG
Sbjct: 14 VESVTFDSAE-VLVLSGASSGVIKLWD--LEEAKMVRTL--TGHKSNCTAVEFHPFG-EF 67
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
A+G +D +D+RK + + GH + ++ I+F D +V+ G D +K+W++
Sbjct: 68 FASGSSDTNLNIWDIRKK-GCIQTYKGHSQGISTIKFSPDGRWVVSGGFDNVVKVWDLTG 126
Query: 264 SRVI---RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT 320
+++ + +KGH+ + +F L L+ GS V +D + FE +
Sbjct: 127 GKLLHDFKFHKGHIRSLDFHPLEF-----LMATGSADRTVKFWD--------LETFELIG 173
Query: 321 AAGSERGFVSSVCWRRVGEDECTLVAGGSDGL 352
+ E V S+ + G TL AG D L
Sbjct: 174 STRHEVLGVRSIAFHPDGR---TLFAGLEDSL 202
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 231 GHRKTVTYIRFLDVDTLVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH +V + F + LV +G + G +KLW++ +++++RT GH +N V + G
Sbjct: 9 GHTSSVESVTFDSAEVLVLSGASSGVIKLWDLEEAKMVRTLTGHKSNCTAVEFHPF--GE 66
Query: 290 LLGCGSETNQVFVYDVR 306
GS + ++D+R
Sbjct: 67 FFASGSSDTNLNIWDIR 83
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVC-DYYICTPAKLSSLKWK 106
+EF P FA+G + I++I+ K C Y +S++K+
Sbjct: 59 VEFHPFGEFFASGSSDTNLNIWDIR--------------KKGCIQTYKGHSQGISTIKFS 104
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + SG +D VV +DL + + H G + S+D+ + L A+GS D T
Sbjct: 105 P--DGRWVVSGGFDNVVKVWDLTGGKLLHDFKFHKG-HIRSLDFHPLE-FLMATGSADRT 160
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
++ WD + + + + + V + FHP G +L A K Y+++
Sbjct: 161 VKFWD--LETFELIGSTRHEV--LGVRSIAFHPDGRTLFAGLEDSLKVYSWE 208
>gi|302809697|ref|XP_002986541.1| hypothetical protein SELMODRAFT_2594 [Selaginella moellendorffii]
gi|300145724|gb|EFJ12398.1| hypothetical protein SELMODRAFT_2594 [Selaginella moellendorffii]
Length = 286
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 110 SGRVLGSGDYDGV--VMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
SG ++ + +D + + DLEK+V + G +++V +S L A+ S D T
Sbjct: 13 SGNLVATASWDHFCRIYDTDLEKEVGVLSGHMLG---LYAVKFSPVRRDLVATVSSDQTC 69
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W D G+C+S ++ + V + F G++L+A D +D + V V
Sbjct: 70 RLWS--LDSGECISVLE--GHKDEVNGLSFKR-GTNLLATASDDTTCIIWDAERGV-AVT 123
Query: 228 VFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GHR TV + F L+ T+ D KLW+ S+ ++T +GHV + +G+ +
Sbjct: 124 ALKGHRNTVYGVCFQPCGHLIATSSFDYTAKLWDARCSKDVQTIRGHVE--DVIGVDIDD 181
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWV 313
G LL GS+ ++D+R P+ V
Sbjct: 182 SGWLLATGSDDKSCRIWDLRMCSPLAV 208
>gi|71895605|ref|NP_001025730.1| katanin p80 WD40 repeat-containing subunit B1 [Gallus gallus]
gi|53134588|emb|CAG32345.1| hypothetical protein RCJMB04_23h13 [Gallus gallus]
Length = 657
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 27/247 (10%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR--VWSVDYSKGDPVLGASGSDDGT 166
++GR+L +G D V + ++ ++ R E G + S+ S + ++ A GS G+
Sbjct: 31 STGRLLATGGDDCQVNVWSVKAQL----RHELTGHTTPIESLQISAKEELIVA-GSQSGS 85
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD + K + T+ ++ +C ++FHP+GS VA+G D +DVR+ +
Sbjct: 86 IRVWD--LEAAKILRTLL--GHKANICSLDFHPYGS-FVASGSLDTDIKLWDVRRK-GCI 139
Query: 227 LVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+ H + V +RF D L +A D +KLW++ +V+ + GH N V
Sbjct: 140 FKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPS 199
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
+ LL GS + +D + F V+ E V + + D C L
Sbjct: 200 EY--LLASGSSDRTIRFWD--------LEKFHVVSCIEEEATPVRCILF---NPDGCCLY 246
Query: 346 AGGSDGL 352
G D L
Sbjct: 247 GGFQDSL 253
>gi|116208426|ref|XP_001230022.1| hypothetical protein CHGG_03506 [Chaetomium globosum CBS 148.51]
gi|88184103|gb|EAQ91571.1| hypothetical protein CHGG_03506 [Chaetomium globosum CBS 148.51]
Length = 644
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+L +G YD + +++E I H G R D SK SGS D T+++W+
Sbjct: 299 ILATGSYDATIKIWNIETGEEIRTLRGHARGIRALQFDDSKL-----ISGSLDNTIKIWN 353
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
R G+C+ST+Q V H F + L+A+G DK +D G
Sbjct: 354 WRT--GECISTLQGHTD----GVVSVH-FDAQLLASGSIDKSVKIFDFNS--KEAFCLKG 404
Query: 232 HRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
H V R LD+ T+++A D LKLW+++ +V+RT++GHV
Sbjct: 405 HTDWVNSTR-LDISSRTVMSASDDTTLKLWDLDTRQVVRTFEGHV 448
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 18/131 (13%)
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
V GH VT ++ LD + L T D +K+WN+ IRT +GH R L
Sbjct: 280 VKTLKGHTNGVTCLQ-LDDNILATGSYDATIKIWNIETGEEIRTLRGHA--RGIRALQF- 335
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLV 345
L GS N + +++ R GE + T G G VS V D L
Sbjct: 336 -DDSKLISGSLDNTIKIWNWRTGECI-------STLQGHTDGVVS------VHFDAQLLA 381
Query: 346 AGGSDGLLHVF 356
+G D + +F
Sbjct: 382 SGSIDKSVKIF 392
>gi|392596501|gb|EIW85824.1| HET-R [Coniophora puteana RWD-64-598 SS2]
Length = 487
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 134/318 (42%), Gaps = 41/318 (12%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
DSI I++ P + A+ R +++++ +S C + P +SS
Sbjct: 111 DSISSIQYSPDGMLIASASNDRFVKLWDA--------------NSGECTKSMEHPDIISS 156
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ P G+ + S D ++ +D+ I VW+V YS L ASGS
Sbjct: 157 AVFSP--CGKRIASACDDNLIRVWDVVSSKLIIPPLSRHKSEVWAVAYSPDGRFL-ASGS 213
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +WDP+ G C ++ A+ ++F G +L++A D+ A+D
Sbjct: 214 RDCTIYLWDPQS-GKICRGPLK--GHNLAISDLKFTFDGQTLISAS-RDRSVRAWDPMTG 269
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ +GH V + F D +V+AG D +++W+ + + +GH N
Sbjct: 270 DCVWDLMEGHTDFVQALEFTPDHSRVVSAGNDRTIRVWDARTGQALLVIEGHEGGIN--D 327
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV---WVHDFEPVTAAGSERGFVSSVCWRRVG 338
L V G L GS V ++D++ G + + HD + V SVCW
Sbjct: 328 LCVSADGSRLVTGSNDETVRIWDIQTGSLIMGPYKHDDD-----------VLSVCW---S 373
Query: 339 EDECTLVAGGSDGLLHVF 356
D +++G SDG V+
Sbjct: 374 PDGTGILSGSSDGTARVW 391
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGS 202
R+WS+ YS D ASGS DGTM++WD R V +P +V V F P
Sbjct: 26 RIWSIAYSP-DGTCIASGSCDGTMRIWDSRTG----VQVGEPLRRYLGSVDSVTFSPDAK 80
Query: 203 SL-VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWN 260
+ VA + + + + V + GHR +++ I++ L+ +A D +KLW+
Sbjct: 81 HIAVAYDDLSIRVWLFSTNEWV--LGPLRGHRDSISSIQYSPDGMLIASASNDRFVKLWD 138
Query: 261 VNDSRVIRTYK 271
N ++ +
Sbjct: 139 ANSGECTKSME 149
>gi|401416216|ref|XP_003872603.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488827|emb|CBZ24075.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1401
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 39/264 (14%)
Query: 58 ATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRV--LG 115
ATGG+ IR++N++++ + + P + S+ W P + LG
Sbjct: 462 ATGGVDGMIRVWNLRTLSQQYSIPV-------------GPVMVHSVDWSPNGKHLIAALG 508
Query: 116 SGDYDGVVMEYDLEK-KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRC 174
SG+ + E + P+F V+ V ++ GD L A+ S G +
Sbjct: 509 SGEVVMYSTSTNRESWRTPVFSE------LVYRVCWAAGDSSLIAATSRSGVAVL---SS 559
Query: 175 DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD-PVLVFDGHR 233
GK V + A+R A V+ P S ++AAG D + Y Y++ D PV V GH
Sbjct: 560 KDGKVVR--RYPATRGAFYGVDIEPTKSKMIAAGSHDHRIYVYNLSSSSDRPVHVLAGHT 617
Query: 234 KTVTYIRF--LDVDTLVTAGTDGCLKLWNV--NDSRVI----RTYKGHVNN-RNFVGLSV 284
V + + ++ L++ DG L++W++ ND+ I R KGH + R+ S+
Sbjct: 618 DAVCDVAYNPTALNYLLSGSYDGTLRVWDLSSNDTHTISVSSRALKGHADRVRSVAWCSL 677
Query: 285 WRHGGLLGCGSETNQVFVYDVRWG 308
+ L+ GS + ++D+R G
Sbjct: 678 APY--LVISGSADASIRLWDIRNG 699
>gi|37522457|ref|NP_925834.1| hypothetical protein gll2888 [Gloeobacter violaceus PCC 7421]
gi|35213458|dbj|BAC90829.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
Length = 1081
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+ G+ +R++++ + ++ + H+ +++ ++ + P
Sbjct: 638 VAFSPDGRTLASAGVDGTVRLWDVP---LGACLMVLEGHT----------SRVRTVAFSP 684
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G G +L SG +D V +++ + H G+ VWS+ + L ASGS D T+
Sbjct: 685 G--GHLLASGGHDQTVRLWEVRSGRCLRVLPGHTGQ-VWSLAFHPNGRTL-ASGSMDQTV 740
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ D G+ + T Q ++ + V FHP G L+A+G D+ +D R +
Sbjct: 741 RLWE--VDSGRSLKTFQGNSGW--IWSVAFHP-GGHLLASGSMDRLVRLWDTRTG-QCLK 794
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
GH V + F ++ +G+ D +KLW V+ R I++ GH N
Sbjct: 795 TLAGHGCWVWSLAFHPGGEILASGSFDQTVKLWEVDTGRCIQSLAGHTN 843
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 126/318 (39%), Gaps = 54/318 (16%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKS---------------VLVDHP------- 79
+ + + F P + A+GG + +R++ ++S L HP
Sbjct: 674 TSRVRTVAFSPGGHLLASGGHDQTVRLWEVRSGRCLRVLPGHTGQVWSLAFHPNGRTLAS 733
Query: 80 -------VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKV 132
+ VD + + + S+ + PG G +L SG D +V +D
Sbjct: 734 GSMDQTVRLWEVDSGRSLKTFQGNSGWIWSVAFHPG--GHLLASGSMDRLVRLWDTRTGQ 791
Query: 133 PIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAV 192
+ HG VWS+ + G +L ASGS D T+++W+ D G+C+ ++ + + +
Sbjct: 792 CLKTLAGHGC-WVWSLAFHPGGEIL-ASGSFDQTVKLWE--VDTGRCIQSL--AGHTNWI 845
Query: 193 CCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTA 250
V F P G+ + +AG + +A+ V GH V + F D L +
Sbjct: 846 RAVAFSPDGAQIASAGVDQTIRLWAWPAGNCTA---VLTGHTGWVRCVAFGPDGRQLASG 902
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE- 309
D +K+W+ + T GH V S G LL +E + V ++++ GE
Sbjct: 903 SLDRTIKIWDAATGECVATLGGHRGQICAVAFS--PDGSLLASAAEDHLVKLWNLATGEC 960
Query: 310 ---------PVWVHDFEP 318
PVW F P
Sbjct: 961 VATLAGHCGPVWSVAFAP 978
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 26/265 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D++ + F P ++ A+G ++++ S + + H+ P
Sbjct: 506 TDALCAMAFHPEGNLLASGSEDLSVKLWAAGS---GQCLATLTGHTGWVYAVAFAP---- 558
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
GR L SG DG V +D+ + + E GG + WSV ++ L +G
Sbjct: 559 --------DGRTLASGSVDGTVRLWDVGTGLCLKILCEPGG-QFWSVAFAPDGQTLATAG 609
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+++W + G C +++ ++ V V F P G +L +AG D +DV
Sbjct: 610 HGH-AIKLW--QVSSGACALSLEGHTAQ--VRSVAFSPDGRTLASAG-VDGTVRLWDV-P 662
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ ++V +GH V + F L + G D ++LW V R +R GH
Sbjct: 663 LGACLMVLEGHTSRVRTVAFSPGGHLLASGGHDQTVRLWEVRSGRCLRVLPGHTG--QVW 720
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV 305
L+ +G L GS V +++V
Sbjct: 721 SLAFHPNGRTLASGSMDQTVRLWEV 745
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 115/288 (39%), Gaps = 42/288 (14%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I ++ F+P +V A G + +IR+ A C + L ++
Sbjct: 467 ILLVAFNPEGTVLAIGDDSGEIRLLR----------AADGQQQARCTGHT---DALCAMA 513
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G +L SG D V + + H G V++V ++ L ASGS D
Sbjct: 514 FHP--EGNLLASGSEDLSVKLWAAGSGQCLATLTGHTGW-VYAVAFAPDGRTL-ASGSVD 569
Query: 165 GTMQMWDPRCDGGKCVSTV-QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
GT+++WD G C+ + +P V F P G +L AG +A + ++
Sbjct: 570 GTVRLWD--VGTGLCLKILCEPGGQ---FWSVAFAPDGQTLATAG----HGHAIKLWQVS 620
Query: 224 DPV--LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
L +GH V + F D TL +AG DG ++LW+V + +GH + V
Sbjct: 621 SGACALSLEGHTAQVRSVAFSPDGRTLASAGVDGTVRLWDVPLGACLMVLEGHTSRVRTV 680
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE----------PVWVHDFEP 318
S H LL G V +++VR G VW F P
Sbjct: 681 AFSPGGH--LLASGGHDQTVRLWEVRSGRCLRVLPGHTGQVWSLAFHP 726
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D T+++WD G+CV+T+ R +C V F P GS L+A+ D ++
Sbjct: 900 ASGSLDRTIKIWDAAT--GECVATL--GGHRGQICAVAFSPDGS-LLASAAEDHLVKLWN 954
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + V GH V + F D L + G D ++ W+ + T +GH +
Sbjct: 955 L-ATGECVATLAGHCGPVWSVAFAPDGLHLASCGHDQVVRFWDAGSGALTATLRGHSDQ- 1012
Query: 278 NFVGLSVWR-----HGGLLGCGSETNQVFVYDVRWGE 309
VW G L GS+ + +++ GE
Sbjct: 1013 ------VWSVAYDPRGETLASGSQDKTIRLWNPATGE 1043
>gi|302852890|ref|XP_002957963.1| hypothetical protein VOLCADRAFT_84253 [Volvox carteri f.
nagariensis]
gi|297592091|gb|ADI46876.1| WDR57f [Volvox carteri f. nagariensis]
gi|300256729|gb|EFJ40989.1| hypothetical protein VOLCADRAFT_84253 [Volvox carteri f.
nagariensis]
Length = 351
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
T G +L S D +D+E + + + EH G G + +G+DD T++
Sbjct: 110 TGGEMLLSCAADKTARCWDVESGLQVKKLGEHTGIVNSCCPLRHGAKMF-VTGADDTTVK 168
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV--DPV 226
+WD R K V TV+ VC V F + G D A+D+RK DP
Sbjct: 169 VWDMRVK--KSVLTVRDGF---PVCAVAFADTDDQVYTGG-VDNVIKAWDLRKGSGSDPA 222
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNF 279
L+ GH TVT +R D L++ D L+ W+V SR + + GH++N +N
Sbjct: 223 LLLKGHSDTVTGLRLSPDGSHLLSNSMDNTLREWDVRPYAPQSRCTKVFTGHLHNFEKNL 282
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYD 304
+ G + CGS +V+++D
Sbjct: 283 LRCDYSSDGSRVACGSADRKVYIWD 307
>gi|75909482|ref|YP_323778.1| pentapeptide repeat-containing protein [Anabaena variabilis ATCC
29413]
gi|75703207|gb|ABA22883.1| Pentapeptide repeat protein [Anabaena variabilis ATCC 29413]
Length = 1474
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 141/319 (44%), Gaps = 39/319 (12%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
F+ Q A + ++ WD N +++ ++ I + F+PS FA+GG
Sbjct: 1118 FNSSGQTLASGSYDKTLKIWDINTYECLTTVQGH----TNWISSVAFNPSGRTFASGG-- 1171
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
N +++ D + ++ ++ + A + G++L S D V
Sbjct: 1172 ------NDATIIWDANTGKCLKTLQIHTAWVFSVA--------FSSCGKMLASSSADAKV 1217
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
++++ + + H V+SV +S +L +SGSD T+++W + G+C++T+
Sbjct: 1218 RLWNIDTGECLKILNGH-TYWVFSVAFSADGKLLASSGSDK-TLKVWS--IETGQCLTTI 1273
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLD 243
A++ V V F+P +L A G D + +DV + + + GH T+ + F
Sbjct: 1274 H--ANQGTVHSVAFNPVNRTL-ANGGFDSQVKLWDVNTG-ECLKILQGHSGTIRSVDFHP 1329
Query: 244 VDTLVTAGTDGC-LKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFV 302
++ +G+ C ++LW+V+ S ++ +GH + S G +L GSE + +
Sbjct: 1330 GGKILASGSADCTIRLWDVDTSECVKILQGHSKVVQSIAFS--SDGQILATGSEDFTIKL 1387
Query: 303 YDV--------RWGEPVWV 313
+++ WG WV
Sbjct: 1388 WNIFTGECFQTLWGHTTWV 1406
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 28/234 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I I F PS ++ A+ G IR++NI + + DH + S+
Sbjct: 945 IRSIAFSPSGAILASSGNDNIIRLWNIDTGESLKTLHGHRDH-------------VYSVA 991
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ P SG +L SG D + +D+ K + I E + R + S G+ + AS S
Sbjct: 992 FDP--SGMILVSGSGDQTIRIWDINSGKCLKILEGHTNAIRSI--ALNSTGEII--ASSS 1045
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +WD + GKC++ ++ V V F+ ++A+G AD +DV+
Sbjct: 1046 SDHTIGLWDIKT--GKCLNILRGHTDN--VMSVVFNN-SDRIIASGGADHTVRLWDVQSG 1100
Query: 223 VDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ + V GH V + F TL + D LK+W++N + T +GH N
Sbjct: 1101 -ECLNVIQGHTNVVRSVAFNSSGQTLASGSYDKTLKIWDINTYECLTTVQGHTN 1153
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
++L +GD +G+V D I HG + V +S +L ASGS D T+++W
Sbjct: 871 KLLATGDGNGIVRLLDAATCKEILICKGHGSI-IPCVAFSPSAQIL-ASGSYDQTIKLWS 928
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
+ G+C+ +Q S + + F P G+ L ++G D +++ + + G
Sbjct: 929 IQT--GECLKILQGHVS--GIRSIAFSPSGAILASSG-NDNIIRLWNI-DTGESLKTLHG 982
Query: 232 HRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
HR V + F ++ +G+ D +++W++N + ++ +GH N + L+ G +
Sbjct: 983 HRDHVYSVAFDPSGMILVSGSGDQTIRIWDINSGKCLKILEGHTNAIRSIALN--STGEI 1040
Query: 291 LGCGSETNQVFVYDVRWGE 309
+ S + + ++D++ G+
Sbjct: 1041 IASSSSDHTIGLWDIKTGK 1059
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 11/202 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L S D + + +E + + G V SV ++ + L A+G D +++W
Sbjct: 1247 GKLLASSGSDKTLKVWSIETGQCLTTIHANQGT-VHSVAFNPVNRTL-ANGGFDSQVKLW 1304
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G+C+ +Q + + V+FHP G ++A+G AD +DV + V +
Sbjct: 1305 D--VNTGECLKILQGHSG--TIRSVDFHP-GGKILASGSADCTIRLWDV-DTSECVKILQ 1358
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH K V I F D L T D +KLWN+ +T GH V S
Sbjct: 1359 GHSKVVQSIAFSSDGQILATGSEDFTIKLWNIFTGECFQTLWGHTTWVLSVAFS--PDCK 1416
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
L GS+ + V+D++ G+ +
Sbjct: 1417 TLISGSQDETIKVWDIKTGDCI 1438
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 108/235 (45%), Gaps = 19/235 (8%)
Query: 80 VVAVVDHSKVCDYYICTP--AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK--VPIF 135
+V ++D + + IC + + + + P S ++L SG YD + + ++ + I
Sbjct: 881 IVRLLDAATCKEILICKGHGSIIPCVAFSP--SAQILASGSYDQTIKLWSIQTGECLKIL 938
Query: 136 ERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCV 195
+ G R S+ +S +L +SG+D+ +++W+ D G+ + T+ R V V
Sbjct: 939 QGHVSGIR---SIAFSPSGAILASSGNDN-IIRLWN--IDTGESLKTLH--GHRDHVYSV 990
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDG 254
F P G LV+ G D+ +D+ + + +GH + I + + ++ +D
Sbjct: 991 AFDPSGMILVS-GSGDQTIRIWDINSG-KCLKILEGHTNAIRSIALNSTGEIIASSSSDH 1048
Query: 255 CLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ LW++ + + +GH +N V + ++ G + V ++DV+ GE
Sbjct: 1049 TIGLWDIKTGKCLNILRGHTDNVMSVVFN--NSDRIIASGGADHTVRLWDVQSGE 1101
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 129/314 (41%), Gaps = 59/314 (18%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D++ + F+ SD + A+GG +R+++++S + + H+ V +
Sbjct: 1068 TDNVMSVVFNNSDRIIASGGADHTVRLWDVQS---GECLNVIQGHTNV----------VR 1114
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + +SG+ L SG YD + +D+ + H + SV ++ ASG
Sbjct: 1115 SVAF--NSSGQTLASGSYDKTLKIWDINTYECLTTVQGHTNW-ISSVAFNPSGRTF-ASG 1170
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+D T+ +WD + GKC+ T+Q + V V F G ++A+ AD K +++
Sbjct: 1171 GNDATI-IWD--ANTGKCLKTLQIHTA--WVFSVAFSSCGK-MLASSSADAKVRLWNI-D 1223
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + + +GH V + F D L ++G+D LK+W++ + + T
Sbjct: 1224 TGECLKILNGHTYWVFSVAFSADGKLLASSGSDKTLKVWSIETGQCLTTIHA-------- 1275
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
NQ V+ V F PV + GF S V V
Sbjct: 1276 -----------------NQGTVHSVA---------FNPVNRTLANGGFDSQVKLWDVNTG 1309
Query: 341 ECTLVAGGSDGLLH 354
EC + G G +
Sbjct: 1310 ECLKILQGHSGTIR 1323
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 12/182 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
R L +G +D V +D+ + H G + SVD+ G +L ASGS D T+++W
Sbjct: 1289 NRTLANGGFDSQVKLWDVNTGECLKILQGHSGT-IRSVDFHPGGKIL-ASGSADCTIRLW 1346
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D D +CV +Q + V + F G ++A G D +++ +
Sbjct: 1347 D--VDTSECVKILQGHSK--VVQSIAFSSDGQ-ILATGSEDFTIKLWNIFTG-ECFQTLW 1400
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D TL++ D +K+W++ I+T + ++R + +++ R G
Sbjct: 1401 GHTTWVLSVAFSPDCKTLISGSQDETIKVWDIKTGDCIKTLR---SDRFYERMNITRVKG 1457
Query: 290 LL 291
L+
Sbjct: 1458 LI 1459
>gi|307154662|ref|YP_003890046.1| XRE family transcriptional regulator [Cyanothece sp. PCC 7822]
gi|306984890|gb|ADN16771.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 7822]
Length = 1221
Score = 63.5 bits (153), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 86/158 (54%), Gaps = 13/158 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D +V ++D+E+ + E H V + S+ L ASGS+D T+++W
Sbjct: 1031 GKTLFSGSDDNLVKKWDIERGEFLLEFSGHTSH-VRGIAVSRDGKTL-ASGSNDRTIKLW 1088
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLV 228
D + KC T++ R + V+FHP G ++A+G D+ ++V+ +++ +L
Sbjct: 1089 DS--ETKKCKHTLE--KQRDWIKTVDFHPNGE-IIASGDYDQMIRLWNVKTGELIKTLL- 1142
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSR 265
GH + V+ + F L+ +G+ DG +KLW+V D +
Sbjct: 1143 --GHIEAVSSVAFSHNGKLLASGSEDGTIKLWDVEDVK 1178
Score = 42.4 bits (98), Expect = 0.35, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L +G YDG + + L + E V S+ +S L S S+D T+++W
Sbjct: 776 GQLLATGGYDGSIQLWYLATG-QFLQSFEGHTNWVRSIIFSNNSQYL-ISCSEDRTIRIW 833
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVF 229
+ + G C++T+ R V + + + L++ K K + + + K ++ V
Sbjct: 834 NLKT--GDCLNTLL--GHRGRVWAIVLNKQDNLLISVSDDQKIKLWEFPLGKCLN---VV 886
Query: 230 DGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
G+ + + F D + +G+D G ++LWN++ + +T GH V S G
Sbjct: 887 QGYTHKIRSVAFSPDDKFLASGSDDGIVRLWNIDTKKCEKTLSGHEGRVWSVAFS--PDG 944
Query: 289 GLLGCGSETNQVFVYDVRWGEP 310
L GS+ + ++++ +P
Sbjct: 945 KKLVSGSDDRTIRIWNLETDKP 966
Score = 42.0 bits (97), Expect = 0.51, Method: Composition-based stats.
Identities = 65/308 (21%), Positives = 113/308 (36%), Gaps = 67/308 (21%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICT-PAKL 100
+ I + F P D A+G +R++NI +K C+ + ++
Sbjct: 890 THKIRSVAFSPDDKFLASGSDDGIVRLWNID--------------TKKCEKTLSGHEGRV 935
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S+ + P G+ L SG D + ++LE P + V SV +S + +S
Sbjct: 936 WSVAFSP--DGKKLVSGSDDRTIRIWNLETDKPELLPLKKYPNWVRSVAFSPKGDYIASS 993
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
G D + +G K + + ++C F P G +L +G D +D+
Sbjct: 994 GDDKFIYLYYYSEKEGWKEKFKFEHNDWIHSIC---FSPDGKTLF-SGSDDNLVKKWDIE 1049
Query: 221 KMVDPVLVFDGHRKTV------------------TYIRFLDVDT---------------- 246
+ + +L F GH V I+ D +T
Sbjct: 1050 RG-EFLLEFSGHTSHVRGIAVSRDGKTLASGSNDRTIKLWDSETKKCKHTLEKQRDWIKT 1108
Query: 247 ---------LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSET 297
+ + D ++LWNV +I+T GH+ + V S +G LL GSE
Sbjct: 1109 VDFHPNGEIIASGDYDQMIRLWNVKTGELIKTLLGHIEAVSSVAFS--HNGKLLASGSED 1166
Query: 298 NQVFVYDV 305
+ ++DV
Sbjct: 1167 GTIKLWDV 1174
Score = 38.5 bits (88), Expect = 5.7, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
R+ S+ +S +L A+ SDDG + +W+ + T +R + V F+ G+
Sbjct: 673 RIRSIIFSPDSKIL-ATASDDGQVILWNIETEQRIKTYTTD---NRYKIHSVLFNSSGNR 728
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLV----FDGHRKTVTYIRFL----DVDTLVTAGTDGC 255
L+ A + Y +D ++ P + ++ T ++R + D L T G DG
Sbjct: 729 LIFAK-ENGYLYQWDWQEQELPDEIGLNGYNFPNNTEKFLRTIALSPDGQLLATGGYDGS 787
Query: 256 LKLWNVNDSRVIRTYKGHVN 275
++LW + + +++++GH N
Sbjct: 788 IQLWYLATGQFLQSFEGHTN 807
>gi|428305650|ref|YP_007142475.1| WD40 repeat-containing protein [Crinalium epipsammum PCC 9333]
gi|428247185|gb|AFZ12965.1| WD40 repeat-containing protein [Crinalium epipsammum PCC 9333]
Length = 349
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 24/199 (12%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS DGT+++W+ GK ++T+ SAS + + P G +VA+G D + +
Sbjct: 68 SGSRDGTIKVWN--LSTGKVLNTI--SASSEGITSLVVSPDGQ-IVASGDIDSTIKVWSL 122
Query: 220 RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
R + + V GH + V + LD TLV+ D +K+WN++ +++ T +GH +
Sbjct: 123 RTG-ELISVLKGHSQGVEAVAISLDGRTLVSGSDDRTIKVWNLSSGKLLYTLRGHAD--Y 179
Query: 279 FVGLSVWRHGGLL--GCGSETNQ-VFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
L++ +G L G GS N+ + ++++ G+ + +PV A+
Sbjct: 180 ISSLAISSNGKFLVSGNGSSANEHIKIWNLSTGKLLHTLKHQPVVAS------------L 227
Query: 336 RVGEDECTLVAGGSDGLLH 354
+ D TL++GG L+H
Sbjct: 228 GITPDNKTLISGGFGQLVH 246
>gi|168018551|ref|XP_001761809.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686864|gb|EDQ73250.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 715
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 144 RVWSVDYSK-GDPVLGASGSDDGTMQMWDPR-CDGGKCVSTVQPSASRSAVCCVEFHPFG 201
R+W V S GD + ASG D T++ W+ R C +T+ + V V++H
Sbjct: 455 RIWDVSSSSSGDFIASASG--DSTVKFWNLRGSSKSPCSATL--TGHEGDVYSVKYHQ-S 509
Query: 202 SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWN 260
++ V G DK +D R + F GH+ +V+ + F + LV +G+ D +K W+
Sbjct: 510 NNYVVTGGYDKTVKLWDARTG-SLLRTFSGHKSSVSRVIFNPLGNLVISGSKDSTIKFWD 568
Query: 261 VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT 320
+ I+TY H+ V ++ + G L S+ N ++DVR P+ F+
Sbjct: 569 LVSGVCIKTYSSHLGEVTSVEMN--KAGSFLLSASKDNSNRLWDVRLARPI--RRFKG-- 622
Query: 321 AAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ + FV + G DE +V G DG ++++
Sbjct: 623 HQNTSKNFVRA----SFGPDESLVVGGSEDGFVYIW 654
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 9/167 (5%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V+SV Y + + + +G D T+++WD R G + T S +S+V V F+P G+ L
Sbjct: 501 VYSVKYHQSNNYV-VTGGYDKTVKLWDART--GSLLRTF--SGHKSSVSRVIFNPLGN-L 554
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVND 263
V +G D +D+ V + + H VT + + L++A D +LW+V
Sbjct: 555 VISGSKDSTIKFWDLVSGV-CIKTYSSHLGEVTSVEMNKAGSFLLSASKDNSNRLWDVRL 613
Query: 264 SRVIRTYKGHVN-NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+R IR +KGH N ++NFV S L+ GSE V+++D GE
Sbjct: 614 ARPIRRFKGHQNTSKNFVRASFGPDESLVVGGSEDGFVYIWDTATGE 660
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASR------SAVCCVEFHPFGSSLVAAGCADKK 213
SGS D T+++WD +GG+CV + S + V G +A+ D
Sbjct: 420 SGSSDNTLRVWD--VEGGRCVRVLGDGEIGSGGGHTSRIWDVSSSSSGD-FIASASGDST 476
Query: 214 AYAYDVRKMVDP--VLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTY 270
+++R GH V +++ + +VT G D +KLW+ ++RT+
Sbjct: 477 VKFWNLRGSSKSPCSATLTGHEGDVYSVKYHQSNNYVVTGGYDKTVKLWDARTGSLLRTF 536
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
GH ++ + V + G L+ GS+ + + +D+
Sbjct: 537 SGHKSSVSRVIFNPL--GNLVISGSKDSTIKFWDL 569
>gi|410912536|ref|XP_003969745.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Takifugu
rubripes]
gi|410930039|ref|XP_003978406.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Takifugu
rubripes]
Length = 684
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G +D V + + K I H V V +S + + +GS G++++
Sbjct: 32 SGRLLATGGHDCRVNLWAVSKANCIMSLTGHKSP-VECVQFSMSEDQI-VTGSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + +S++ + FHPF +A+G D +D R+ V +
Sbjct: 90 WD--MEAAKIVKTL--TGHKSSISSLAFHPF-QGFLASGSMDTNIKLWDFRRK-GHVFRY 143
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V + F D L +A DG +KLW++ + I + H N V + +
Sbjct: 144 TGHTQAVRSLAFSPDGKWLASASDDGTVKLWDLMQGKTITEFTSHTAAVNIVQFNPNEY- 202
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V ++D+
Sbjct: 203 -LLASGSSDRTVKLWDL 218
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVD 245
A S V C+ L+A G D + + V K + ++ GH+ V ++F + D
Sbjct: 18 AHSSTVSCLALGKNSGRLLATGGHDCRVNLWAVSK-ANCIMSLTGHKSPVECVQFSMSED 76
Query: 246 TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+VT G +++W++ +++++T GH + L+ G L GS + ++D
Sbjct: 77 QIVTGSQSGSIRVWDMEAAKIVKTLTGH--KSSISSLAFHPFQGFLASGSMDTNIKLWDF 134
Query: 306 R 306
R
Sbjct: 135 R 135
>gi|393231075|gb|EJD38672.1| HET-E, partial [Auricularia delicata TFB-10046 SS5]
Length = 529
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 9/203 (4%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+GR + S DG + +D E PI + V SV YS D SG+DD T+++
Sbjct: 39 NGRHICSAGDDGTIRRWDAESGAPIGKSMTSHSNDVKSVAYSP-DSTRIVSGADDCTVRL 97
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD G + V V CV F P G+ +A+G D +D +
Sbjct: 98 WDAST--GDALG-VPLEGHTHCVWCVAFSPDGA-CIASGSEDNTIRLWDGTTGAH-LATL 152
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH V+ + F D LV+ D +++WN+ + RT +GH + V +S G
Sbjct: 153 EGHSGMVSSLCFSPDRTHLVSGSADQTVRIWNIETRNLERTLRGHSAEVDSVAIS--PSG 210
Query: 289 GLLGCGSETNQVFVYDVRWGEPV 311
+ GS + ++D + GE V
Sbjct: 211 RYIASGSSDETIRIWDAQTGEAV 233
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 134/326 (41%), Gaps = 39/326 (11%)
Query: 36 SPNAAVSDSIGVIEFDPSDS--VFATGGIARKIRIYN-IKSVLVDHPVVAVVDHSKVCDY 92
+P +D I + F P V +G + IRI++ I +V P++ HS
Sbjct: 235 APLTGHTDWIYSLAFSPDGRSIVVVSGSRDKSIRIWDTITGAVVFGPLLG---HSSAVRC 291
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
+P +G L S D + +D E PI E V V YS
Sbjct: 292 VAVSP------------NGNQLCSASEDYTIRLWDAESGSPIGEPMTGHDGWVHCVAYSP 339
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
D SG+ D T+++W+ G+ + + + V F P G+ +A+G D
Sbjct: 340 -DGARIVSGAADRTIRLWNTVT--GRALGLPLEGHAWN-VTSTAFSPDGA-YIASGSVDC 394
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D + GH +V I F D LV+ D +++WNV R+ K
Sbjct: 395 TIRLWDSTTGAH-LATLIGHENSVLSIGFSPDQIHLVSGSEDETIRIWNVATRRLDHILK 453
Query: 272 GHVNNRNFV-GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVS 330
GH +FV ++V + G + GS+ + ++D GEPV P+T +++
Sbjct: 454 GH---SSFVYSVAVSQSGRYIASGSDDKTIRIWDAETGEPV----GAPLTG---HTDWLN 503
Query: 331 SVCWRRVGEDECTLVAGGSDGLLHVF 356
SV + G +LV+G DG + ++
Sbjct: 504 SVAFSPDGR---SLVSGADDGKVRIW 526
>gi|122065379|sp|Q5ZIU8.2|KTNB1_CHICK RecName: Full=Katanin p80 WD40 repeat-containing subunit B1;
Short=Katanin p80 subunit B1; AltName: Full=p80 katanin
Length = 657
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
++GR+L +G D V + + K + H + S+ S + ++ A GS G+++
Sbjct: 31 STGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP-IESLQISAKEELIVA-GSQSGSIR 88
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K + T+ ++ +C ++FHP+GS VA+G D +DVR+ +
Sbjct: 89 VWD--LEAAKILRTLL--GHKANICSLDFHPYGS-FVASGSLDTDIKLWDVRRK-GCIFK 142
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ H + V +RF D L +A D +KLW++ +V+ + GH N V +
Sbjct: 143 YKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEY 202
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS + +D + F V+ E V + + D C L G
Sbjct: 203 --LLASGSSDRTIRFWD--------LEKFHVVSCIEEEATPVRCILF---NPDGCCLYGG 249
Query: 348 GSDGL 352
D L
Sbjct: 250 FQDSL 254
>gi|428303925|ref|YP_007140750.1| WD40 repeat-containing protein [Crinalium epipsammum PCC 9333]
gi|428245460|gb|AFZ11240.1| WD40 repeat-containing protein [Crinalium epipsammum PCC 9333]
Length = 472
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 31/266 (11%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D++ + P + A+G ++I+++N+++ + HS + +P
Sbjct: 96 DAVASVAISPDGKLLASGSWDKRIKLWNLQT---GELLRTFKGHSDQVEAVAFSP----- 147
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
G+ L +G YD V ++LE + H V ++ +S L ASG+
Sbjct: 148 -------DGKTLATGSYDKTVNLWNLETG-ELLHTLRHSAS-VRTIAFSPDGQKL-ASGT 197
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVR 220
+DG + +W P G+ + +A AV V F P G L A+G D+ K +
Sbjct: 198 EDGKISIWQPST--GEL--NIPLAAHSQAVRSVAFSPDGQKL-ASGSYDRTIKLWNLPTG 252
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
++++ GH + V + F D TL ++ D +KLW V +++RT GH N+
Sbjct: 253 QLLN---TLAGHNQAVWSVAFSPDSQTLASSSYDRTIKLWYVQSGQLLRTLVGH--NKTV 307
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDV 305
++ G L GS + ++ +
Sbjct: 308 WSVAFSPDGQTLASGSADETIKLWSM 333
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + + F P ATG + + ++N+++ + H + HS +P
Sbjct: 137 SDQVEAVAFSPDGKTLATGSYDKTVNLWNLETGELLH----TLRHSASVRTIAFSP---- 188
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDL---EKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
G+ L SG DG + + E +P+ + V SV +S L
Sbjct: 189 --------DGQKLASGTEDGKISIWQPSTGELNIPLAAHSQ----AVRSVAFSPDGQKL- 235
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D T+++W+ G+ ++T+ + AV V F P +L ++ Y
Sbjct: 236 ASGSYDRTIKLWN--LPTGQLLNTL--AGHNQAVWSVAFSPDSQTLASSSYDRTIKLWYV 291
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+ LV GH KTV + F D TL + D +KLW+++
Sbjct: 292 QSGQLLRTLV--GHNKTVWSVAFSPDGQTLASGSADETIKLWSMS 334
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 243 DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFV 302
D TL +A D +KLWN++ ++++T KGH + V +S G LL GS ++ +
Sbjct: 64 DGKTLASASYDKTIKLWNLHTGQLLQTLKGHGDAVASVAIS--PDGKLLASGSWDKRIKL 121
Query: 303 YDVRWGE 309
++++ GE
Sbjct: 122 WNLQTGE 128
>gi|89355784|gb|ABD72238.1| brain p80 katanin [Gallus gallus]
Length = 657
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
++GR+L +G D V + + K + H + S+ S + ++ A GS G+++
Sbjct: 31 STGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP-IESLQISAKEELIVA-GSQSGSIR 88
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K + T+ ++ +C ++FHP+GS VA+G D +DVR+ +
Sbjct: 89 VWD--LEAAKILRTLL--GHKANICSLDFHPYGS-FVASGSLDTDIKLWDVRRK-GCIFK 142
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ H + V +RF D L +A D +KLW++ +V+ + GH N V +
Sbjct: 143 YKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEY 202
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS + +D + F V+ E V + + D C L G
Sbjct: 203 --LLASGSSDRTIRFWD--------LEKFHVVSCIEEEATPVRCILF---NPDGCCLYGG 249
Query: 348 GSDGL 352
D L
Sbjct: 250 FQDSL 254
>gi|425439705|ref|ZP_18820023.1| hypothetical protein MICAB_1740007 [Microcystis aeruginosa PCC
9717]
gi|389720023|emb|CCH96229.1| hypothetical protein MICAB_1740007 [Microcystis aeruginosa PCC
9717]
Length = 246
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 38 NAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTP 97
N + S+ + F P ATG + I+++N+++ + + H+ + +P
Sbjct: 6 NTGHNKSVTSVSFSPDGKTLATGSEDKTIKLWNVET---GQEIRTLTGHNDSVNSVSFSP 62
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
G+ L SG D + +D+E I H V SV +S +L
Sbjct: 63 ------------DGKTLASGSGDDTIKLWDVETGQEIRTLFGH-NEGVSSVSFSSDGKIL 109
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+++W+ + G+ + T+ S V V F P G +L A G D +
Sbjct: 110 -ASGSYDTTIKLWNVQT--GQEIRTL--SGHNGNVLSVSFSPDGKTL-ATGSHDNTIKLW 163
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN 260
+V + + GH +VT + F D TL + D +KLWN
Sbjct: 164 NVETGKE-IRTLSGHNNSVTSVSFSPDGKTLASGSWDNTIKLWN 206
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L +G D + +++E I H V SV +S L ASGS D T+++W
Sbjct: 22 GKTLATGSEDKTIKLWNVETGQEIRTLTGHN-DSVNSVSFSPDGKTL-ASGSGDDTIKLW 79
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + G+ + T+ V V F G ++A+G D ++V+ + +
Sbjct: 80 D--VETGQEIRTL--FGHNEGVSSVSFSSDGK-ILASGSYDTTIKLWNVQTGQE-IRTLS 133
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D TL T D +KLWNV + IRT GH N+ V S G
Sbjct: 134 GHNGNVLSVSFSPDGKTLATGSHDNTIKLWNVETGKEIRTLSGHNNSVTSVSFS--PDGK 191
Query: 290 LLGCGSETNQVFVYD 304
L GS N + +++
Sbjct: 192 TLASGSWDNTIKLWN 206
>gi|393219326|gb|EJD04813.1| WD40 repeat-like protein [Fomitiporia mediterranea MF3/22]
Length = 1170
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 12/231 (5%)
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
+ V S + + A + S+ + P G + SG DG++ +D E IF E
Sbjct: 549 IGVKQRSPLLKVLMGHTAWVQSVIFSP--DGTHVASGSSDGMIRIWDAESGRVIFGSFEG 606
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
V S+ +S D V SGSDD T+++WD +GG+ S + S V V F P
Sbjct: 607 HKGYVESIAFSL-DGVRVVSGSDDKTIRIWD--VEGGQMTSRLM-EGHDSVVLSVAFSP- 661
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI-RFLDVDTLVTAGTDGCLKLW 259
G + VA+G ADK DV + F+GH V + D +V+ D +++W
Sbjct: 662 GGTCVASGSADKTVMVLDVESR-QAIKRFEGHAHIVFDVASSPDGKRIVSGSADRTIRIW 720
Query: 260 NVNDSRVI-RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ + +GH V S R G + GSE N + ++D G+
Sbjct: 721 EIGSGQTACSPLEGHTGGVRSVTFS--RDGTRIASGSEDNTIRIWDAESGD 769
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 11/214 (5%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++S+ + P G+ + SG +D V +D+E + V SV +S D
Sbjct: 782 VTSVTFSP--DGKRVVSGSWDMTVRIWDVESGQVVSGPFTGHTFLVSSVAFSP-DSTRVV 838
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD + + VS AVCC+ F P G V +G D +D
Sbjct: 839 SGSYDSTIRIWD--AESVRAVSG-DFKGHTGAVCCIAFSPDGKR-VLSGSHDTTIRIWDT 894
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGC-LKLWNVNDSRVIR-TYKGHVNNR 277
F GH + V + F T V +G++ C +++W+ V+ +K H+++
Sbjct: 895 ESGNTVSGPFKGHSRRVISVTFSPDGTHVASGSEDCTIRVWDAESGNVVSGRFKEHMSHV 954
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G + GSE + ++DV+ G+ +
Sbjct: 955 RSACFS--PDGTRVVSGSEDATLQIWDVKSGQTI 986
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 12/221 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + SG D + +D E + R + V S +S D SGS+D T+Q+W
Sbjct: 920 GTHVASGSEDCTIRVWDAESGNVVSGRFKEHMSHVRSACFSP-DGTRVVSGSEDATLQIW 978
Query: 171 DPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D + G+ +S P + V V F P G +V +G +DK +DV
Sbjct: 979 DVKS--GQTIS--GPFGGHTGDVYSVAFSPDGRHVV-SGSSDKTIIVWDVESGGIIAGPM 1033
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIR-TYKGHVNNRNFVGLSVWRH 287
GH V + F T V +G+ DG + +WNV + +V+ +GH N V S
Sbjct: 1034 KGHTDEVRSVAFSPDGTRVVSGSGDGAILIWNVENGQVVVGPLEGHTNGVWSVAFS--PD 1091
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGF 328
G + S + V+D G+ ++ FE T + S F
Sbjct: 1092 GARIVSDSADCTIRVWDSESGQAIFA-PFESHTLSVSSVAF 1131
>gi|328688463|gb|AEB35843.1| COP1 [Helianthus tuberosus]
gi|328688465|gb|AEB35844.1| COP1 [Helianthus tuberosus]
Length = 84
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 2 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 59
Query: 156 VLGASGSDDGTMQMWDPRCDGG 177
+ SGSDD +++W R D
Sbjct: 60 SMLVSGSDDCKVKIWCTRQDSS 81
>gi|428177778|gb|EKX46656.1| hypothetical protein GUITHDRAFT_86622 [Guillardia theta CCMP2712]
Length = 462
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 6/206 (2%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G++L SG D V + ++K + E +E RV+ + ++ DP + AS S D T+Q+
Sbjct: 136 NGKILVSGSSDRAVKVWVVDKDRQVVEEEEAHAGRVYKIAFNPQDPTVVASCSADKTIQV 195
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W+ ++ V V F P +L+A+ +D +DV+K +
Sbjct: 196 WNFETGAA---TSAGLGGHTDYVLDVAFSPHDPNLLASCSSDTTIRLWDVQKFRVILPPL 252
Query: 230 DGHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH V + F D L + +D +++W+V + RT +GH + + S+ +
Sbjct: 253 TGHSGAVCCLLFHPSDPAVLASGSSDRTIRVWSVTGGHLRRTLRGHDSGVASLACSL-SN 311
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWV 313
LL G + ++ ++ G P V
Sbjct: 312 PNLLASGGQDGRIKLWHFLEGSPAGV 337
>gi|392590133|gb|EIW79462.1| WD40 repeat-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 541
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 126/300 (42%), Gaps = 32/300 (10%)
Query: 32 SSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCD 91
+S P SD+I + F P+ + FATG IRI++ + + D
Sbjct: 3 NSDFEPFKGHSDNIIALVFSPNGTFFATGSRDHTIRIWDAAT------------GRQRGD 50
Query: 92 YYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS 151
+S L + P + V S D V + + + E GG VDYS
Sbjct: 51 VLRGHTGWISGLAYSPDGNQLVSCSSDKSLRVWDANTHHLITDTLEGETGGGGFLCVDYS 110
Query: 152 KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD 211
D ++ ASG +G +++WD R G C +T+Q + V F P G S VA C D
Sbjct: 111 PDDGLV-ASGDTNGLLKLWDVR--EGTCTATIQHP---HRINSVAFSPDGES-VATACHD 163
Query: 212 K--KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIR 268
+ + YA D R +V ++ GHR +V + + D L +A D + LW+ + R
Sbjct: 164 RIVRIYAVDDRALVYHLV---GHRASVRRVLYSPDGSLLASASHDHTVHLWDSQKGELRR 220
Query: 269 TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE----PVWVHDFEPVTAAGS 324
GH +G+S G L S V V+DV GE P++ H PV A S
Sbjct: 221 ILCGH--RHCVIGVSFSDTGERLVSSSSDESVRVWDVASGECLMGPLYGHR-GPVAAIAS 277
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 28/199 (14%)
Query: 21 CEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV 80
C WD L+ S P S + + F P A+GG + +RI++++S +
Sbjct: 338 CLWDVQLKVL---SLPPLTGHSGPVLAVRFTPDGLRLASGGHDKTVRIWDVQS----GAL 390
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
+ V+ C + A G L SG DG++ +DL+ + + H
Sbjct: 391 LRVLQGHNDCVRALSVSAD-----------GARLTSGSGDGILNIWDLKSYTILVDSLNH 439
Query: 141 GGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
GR V SV ++ G VL SGS D T+++W+ C G Q V CV+F
Sbjct: 440 -GRGVTSVCFAPDGSKVL--SGSSDNTVRVWNIPC--GTLAFVFQHGGD---VNCVQFSA 491
Query: 200 FGSSLVAAGCADKKAYAYD 218
G ++A D++ +D
Sbjct: 492 EGHKFLSAS-GDRRVCVWD 509
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 7/149 (4%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS +D +++WD R + V S S V C++ L +AG D +D
Sbjct: 286 ASAGNDCIIRIWDERAGLELHIPLVCHS---SEVNCLDLSKDERLLASAG-GDAIICLWD 341
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
V+ V + GH V +RF D L + G D +++W+V ++R +GH N
Sbjct: 342 VQLKVLSLPPLTGHSGPVLAVRFTPDGLRLASGGHDKTVRIWDVQSGALLRVLQGH--ND 399
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
LSV G L GS + ++D++
Sbjct: 400 CVRALSVSADGARLTSGSGDGILNIWDLK 428
>gi|418048174|ref|ZP_12686262.1| WD40 repeat-containing protein [Mycobacterium rhodesiae JS60]
gi|353193844|gb|EHB59348.1| WD40 repeat-containing protein [Mycobacterium rhodesiae JS60]
Length = 1399
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 152/381 (39%), Gaps = 66/381 (17%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A TN++ WD N T + P D++ + F P A+G + + +++
Sbjct: 918 ASGTNDKTVRLWDANALTPIGE---PMTGHKDAVTAVAFSPDGHRLASGSKDKNVFLWDA 974
Query: 72 KSVLVDHPVVA-VVDHSKVCDYYICTP--AKLSSL-------KWKPGT------------ 109
+ P+V +V H + +P L+S W GT
Sbjct: 975 DA---RRPIVGPMVGHDDIIHEIAFSPDGRMLASAGGDNVVWMWDAGTGTAVGKPLTGHE 1031
Query: 110 ----------SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
R + +G YD V +D+ + G +W+V + D L A
Sbjct: 1032 FDVYSLAFSPDSRYIVTGSYDQTVRLWDVGDMI------LAGQGELWTVALNP-DGRLIA 1084
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAY 217
SG DDG++++WD + G V P + AV V F P G L A G D+ + +
Sbjct: 1085 SGGDDGSVRLWDTQS--GMIVGAPLPGTPKQAVEAVAFSPDGRRL-AEGGDDRTIRVWET 1141
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVI-RTYKGHVN 275
D K+V L+ GH V I F D LV+ D +++W+V+ I GH +
Sbjct: 1142 DTGKLVGRPLI--GHTDLVWAIGFSPDGSKLVSGSADRTIRIWDVDSGAPIGNPITGHTS 1199
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
+ G++ G + GS + ++D G P+ +P+T G ++V
Sbjct: 1200 --DVYGVAFSPDGSRIVSGSVDRTIRLWDASTGAPI----GKPIT------GHTNTVDSV 1247
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
D +V+G SDGL+ ++
Sbjct: 1248 AFSPDGTRIVSGASDGLVRLW 1268
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 130/357 (36%), Gaps = 81/357 (22%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P TG + +R+++ V D + +L ++ P
Sbjct: 1037 LAFSPDSRYIVTGSYDQTVRLWD------------------VGDMILAGQGELWTVALNP 1078
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKV--------------------PIFERDEHGGR---- 143
GR++ SG DG V +D + + P R GG
Sbjct: 1079 --DGRLIASGGDDGSVRLWDTQSGMIVGAPLPGTPKQAVEAVAFSPDGRRLAEGGDDRTI 1136
Query: 144 RVWSVDYSK--GDPVLG-----------------ASGSDDGTMQMWDPRCDGGKCVSTVQ 184
RVW D K G P++G SGS D T+++WD D G +
Sbjct: 1137 RVWETDTGKLVGRPLIGHTDLVWAIGFSPDGSKLVSGSADRTIRIWD--VDSGAPIGN-P 1193
Query: 185 PSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-D 243
+ S V V F P GS +V+ G D+ +D GH TV + F D
Sbjct: 1194 ITGHTSDVYGVAFSPDGSRIVS-GSVDRTIRLWDASTGAPIGKPITGHTNTVDSVAFSPD 1252
Query: 244 VDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW-RHGGLLGCGSETNQVFV 302
+V+ +DG ++LWN + K + + + VG V+ + G L+ G V +
Sbjct: 1253 GTRIVSGASDGLVRLWNAQTG--VPIGKPLIGHTDAVGSVVYGQDGRLIVSGGYEGDVRL 1310
Query: 303 YDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGK 359
+D G P+ +G + V + + +V+ G DG + ++ K
Sbjct: 1311 WDATSGRPI----------GAPLQGHAALVVGVAINSEHHLVVSAGDDGAIRLWSTK 1357
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 108/283 (38%), Gaps = 40/283 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYN-IKSVLVDHPVVAVVDHSKVCDY-----YICTPAKLS 101
+ F P S A+ +RI++ + LV P+ + D + Y + ++
Sbjct: 778 VAFSPDGSRVASASDDHLVRIWDRVTGTLVGQPLAGLTDSAFSVTYSPDGRRLAAASEQF 837
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
L W + G M D + K IF D GRR+ A+
Sbjct: 838 VLVWNADAD-----TASGSGAPMRIDAVNVKQVIFSPD---GRRL-------------AT 876
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S DGT++MWD V P AV + F P G +A+G DK +D
Sbjct: 877 ASSDGTIEMWDAGSGTQLAQVLVGPE---DAVNSIAFSPDGHR-IASGTNDKTVRLWDAN 932
Query: 221 KMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSR-VIRTYKGHVNNRN 278
+ GH+ VT + F D L + D + LW+ + R ++ GH + +
Sbjct: 933 ALTPIGEPMTGHKDAVTAVAFSPDGHRLASGSKDKNVFLWDADARRPIVGPMVGHDDIIH 992
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYD----VRWGEPVWVHDFE 317
+ S G +L N V+++D G+P+ H+F+
Sbjct: 993 EIAFSP--DGRMLASAGGDNVVWMWDAGTGTAVGKPLTGHEFD 1033
>gi|328688719|gb|AEB35971.1| COP1 [Helianthus annuus]
Length = 96
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRX 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|113477231|ref|YP_723292.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
gi|110168279|gb|ABG52819.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
Length = 1858
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 39/267 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SDS+ I F P++ + A+G + + I+I+N VL+ T S
Sbjct: 1202 SDSVVTINFSPNNKMLASGSLDKTIKIWNYTGVLLR------------------TIRTKS 1243
Query: 102 SLKWKP-GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR----VWSVDYS-KGDP 155
+KW +G+++ + + +G V ++L K + + +HG V+S ++S G
Sbjct: 1244 VVKWVSFSPNGKMIAAANANGTVQLWNLNGK--LLKTLKHGAGNHNYPVYSANFSPDGKR 1301
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
++ ASG D T+++W R + + + V F P G ++A+ DK
Sbjct: 1302 MVTASG--DQTVKIW--RFFRNIPILEKTITGHKKQVINASFSPDG-KIIASSSTDKTIK 1356
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV-NDSRVIRTYKGH 273
+ + + + F GH TVT + F D +TL +A D +K W++ NDS + +GH
Sbjct: 1357 VWQLDGTL--LKTFSGHGDTVTQVTFSPDGETLASASYDKTIKFWSLKNDS--LNVLQGH 1412
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQV 300
+G+S G +L S+ N +
Sbjct: 1413 --KHRVLGVSFSPDGQILASASQDNTI 1437
Score = 54.7 bits (130), Expect = 7e-05, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 18/179 (10%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV +S +L AS SDDGT+++W + G + T+ +A V V F P G ++
Sbjct: 1674 VSSVSFSPDGKIL-ASASDDGTVKLWTQK---GVLLKTI--NAHSGWVLGVSFSPNGQAI 1727
Query: 205 VAAGCADK-KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
A + K ++ D + G +VT + F D + ++ DG +KLW++
Sbjct: 1728 ATASYDNTVKLWSLDGELLRT---FLKGASDSVTSVSFSPDGQAIASSSYDGKVKLWSLY 1784
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV-----WVHDF 316
D +++T GH ++ V S G LL GS V ++D+ + WV D+
Sbjct: 1785 DGSLLKTLNGHQDSVMSVSFS--PDGKLLASGSRDKTVILWDLALDSLLDQGCSWVRDY 1841
>gi|451846498|gb|EMD59808.1| hypothetical protein COCSADRAFT_127390 [Cochliobolus sativus
ND90Pr]
Length = 359
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 130/311 (41%), Gaps = 45/311 (14%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYY-ICTPAKLSSLKWKPG 108
FDP+ A+G + R I ++ S C+ Y I T K + L
Sbjct: 74 FDPTGQCIASGSMDRSILLWR---------------SSDTCENYGILTGHKQAVLDLHWS 118
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSK-GDPVLGASGSDDGT 166
+VL S D + +D+E I R G V + +D SK G+ VL SGSDDG
Sbjct: 119 RDSKVLFSASADMHLASWDVETGERI--RRHPGHEEVINCMDVSKRGEEVL-VSGSDDGY 175
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+ +WD R V+ +Q +A+C E G+ L G D +D+RK
Sbjct: 176 IGIWDTRTK--DAVTFIQTDFPITAICLAE---AGNELFTGGI-DNDIKVWDLRKQAVTY 229
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHV--NNRNF 279
+ GH TVT ++ D TL++ D ++ W+V R I+TY G RN
Sbjct: 230 TLI-GHTDTVTSLQMSPDNQTLLSNAHDSTVRTWDVRPFAPADRRIQTYDGAPTGQERNL 288
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
+ S G + GS V V++ R G+ +H RG V+ V + +G
Sbjct: 289 LKASWDFKGEKIAAGSGDQSVAVWETRTGK--LLHKLP------GHRGAVNDVRFHPLG- 339
Query: 340 DECTLVAGGSD 350
E LV+ SD
Sbjct: 340 -EPILVSASSD 349
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 31/172 (18%)
Query: 59 TGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGD 118
TGGI I++++++ V + ++ D ++SL+ P + L S
Sbjct: 210 TGGIDNDIKVWDLRKQAVTYTLIGHTD-------------TVTSLQMSP--DNQTLLSNA 254
Query: 119 YDGVVMEYDL------EKKVPIFERDEHGGRRVW---SVDYSKGDPVLGASGSDDGTMQM 169
+D V +D+ ++++ ++ G R S D+ KG+ + A+GS D ++ +
Sbjct: 255 HDSTVRTWDVRPFAPADRRIQTYDGAPTGQERNLLKASWDF-KGEKI--AAGSGDQSVAV 311
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
W+ R GK + + R AV V FHP G ++ + +D+K ++ K
Sbjct: 312 WETRT--GKLLHKL--PGHRGAVNDVRFHPLGEPILVSASSDRKVMVGELGK 359
>gi|357606523|gb|EHJ65100.1| hypothetical protein KGM_06958 [Danaus plexippus]
Length = 419
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 9/182 (4%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
Y A++ +L++ P G+ L +G +DG + +D + + H G + SV Y+
Sbjct: 217 YAGHTAEVIALQFDP-NEGQKLITGSFDGTISLWDTRVRDRVGVLRGHSGE-ISSVQYN- 273
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
D L S S DG+ ++WD R + C++TV + C ++ +A +D
Sbjct: 274 WDSTLVGSASLDGSARLWDARQN--TCLATVASHSDEVLDICFDW---AGQRMATSSSDC 328
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYK 271
A YDVR + V GHR+ V+ + F L+T+ D ++WN N I+
Sbjct: 329 SARVYDVRAEFKELAVMKGHREEVSKVCFSPAGGCLLTSSADRSARIWNTNTGNCIQVLS 388
Query: 272 GH 273
GH
Sbjct: 389 GH 390
>gi|342181571|emb|CCC91051.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 810
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 30/175 (17%)
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-----------DVDTLV 248
F S++V ++K YD+ +V D H + + I L + +
Sbjct: 652 FASNIVMWAASNKSFGIYDIAVGQHISIVEDAHTRPLHSIASLAAGRYASVGSAQLHMCL 711
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
TAG D C++LW++ R +R H N+ VG + +G L+ GSET V +YDV G
Sbjct: 712 TAGMDNCVRLWDIRQKRSVRQLAQHRNSATTVGAAFSPNGSLVAVGSETRAVLLYDVGTG 771
Query: 309 ---EPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
+ + +D +S+CW + E L G ++G +H F+G+K
Sbjct: 772 AVLDKIVTNDVP------------TSICWHPI---ENILAVGAANGGIH-FMGQK 810
>gi|449546144|gb|EMD37114.1| hypothetical protein CERSUDRAFT_124087 [Ceriporiopsis subvermispora
B]
Length = 1636
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 54/320 (16%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYICTPAKLS 101
D + + F P + +G IR++++++ V P+ H+++ +P
Sbjct: 849 DIVQSVVFSPDGTCVISGSSDCTIRVWDVRTGREVMEPLAG---HTRMITSVAISP---- 901
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDL----EKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
G + SG D V +D+ E P+ D V+S+D SK
Sbjct: 902 --------DGTRIASGSGDRTVRVWDMATGKEVTEPLKVHDNWVRSVVFSLDGSKI---- 949
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-----VCCVEFHPFGSSLVAAGCADK 212
SGSDD T+++WD + T +P A V V F P G +A+G D+
Sbjct: 950 -ISGSDDHTIRLWDAK--------TAEPRAETLTGHTGWVNSVAFAPDG-IYIASGSNDQ 999
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN-DSRVIRTY 270
++ R + + GH ++VT + FL D +V+ DG +++W+ D I+
Sbjct: 1000 SIRMWNTRTGQEVMEPLTGHTRSVTSVVFLPDGTQIVSGSNDGTIRVWDARLDEEAIKPL 1059
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVS 330
GH ++ N V S G + GS + ++D R GE V +P+T G +
Sbjct: 1060 PGHTDSVNSVAFSP--DGSRVASGSSDGTIRIWDSRTGEQV----VKPLTG---HEGRIR 1110
Query: 331 SVCWRRVGEDECTLVAGGSD 350
S+ + G T +A GSD
Sbjct: 1111 SIAFSPDG----TQLASGSD 1126
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 137/343 (39%), Gaps = 60/343 (17%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYN-IKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
I I F P + A+G + +R+++ + V V P+ H+ Y +
Sbjct: 1109 IRSIAFSPDGTQLASGSDDKTVRLWDAVTGVEVTKPLTG---HTGTV-YSVAF------- 1157
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ G + SG D + ++ + E RVWSV +S ++ ASGS
Sbjct: 1158 ----SSDGSQIASGSDDCTICLWNAATGEEVGEPLTGHEERVWSVAFSPNGSLI-ASGSA 1212
Query: 164 DGTMQMWDPRCD--GGKCV----STVQPSASRSAVCC----------------------V 195
D T+++WD R D G K + + + +C V
Sbjct: 1213 DKTIRIWDTRADAEGAKLLRGHMDDIASGSDDCTICLWNAATGEEVGEPLTGHEERVWSV 1272
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDG 254
F P GS L+A+G ADK +D R + + GH V + F D +V+ +DG
Sbjct: 1273 AFSPNGS-LIASGSADKTIRIWDTRADAEGAKLLRGHMDDVYTVAFSADGTRVVSGSSDG 1331
Query: 255 CLKLWNVND-SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV 313
+++W+ + + ++ KGH ++V G + G+ + ++D R G+ V
Sbjct: 1332 SIRIWDASTGTETLKPLKGH--QGAIFSVAVSPDGTRIASGASNGTICIWDARTGKEV-- 1387
Query: 314 HDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
P+T G V SV + D + +G DG + +F
Sbjct: 1388 --IAPLTGHGDS---VRSVAF---SPDGTRIASGSDDGTVRIF 1422
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+++WD R G+ V+ +P + V V F P G+ + +G DK +
Sbjct: 778 ASGSIDRTIRVWDART--GEEVT--KPLTGHTGWVYSVAFSPDGTH-ITSGSDDKTIRIW 832
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGC-LKLWNVNDSR-VIRTYKGHVN 275
D R + V GH V + F T V +G+ C +++W+V R V+ GH
Sbjct: 833 DARTAEEVVKPLTGHGDIVQSVVFSPDGTCVISGSSDCTIRVWDVRTGREVMEPLAGH-- 890
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG----EPVWVHD 315
R +++ G + GS V V+D+ G EP+ VHD
Sbjct: 891 TRMITSVAISPDGTRIASGSGDRTVRVWDMATGKEVTEPLKVHD 934
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 15/213 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + SG D + ++ + E R V SV + D SGS+DGT+++W
Sbjct: 989 GIYIASGSNDQSIRMWNTRTGQEVMEPLTGHTRSVTSVVFLP-DGTQIVSGSNDGTIRVW 1047
Query: 171 DPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D R D ++P + +V V F P GS VA+G +D +D R V
Sbjct: 1048 DARLDE----EAIKPLPGHTDSVNSVAFSPDGSR-VASGSSDGTIRIWDSRTGEQVVKPL 1102
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWN-VNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH + I F T + +G+ D ++LW+ V V + GH V S
Sbjct: 1103 TGHEGRIRSIAFSPDGTQLASGSDDKTVRLWDAVTGVEVTKPLTGHTGTVYSVAFS--SD 1160
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT 320
G + GS+ + +++ GE V EP+T
Sbjct: 1161 GSQIASGSDDCTICLWNAATGEEVG----EPLT 1189
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 39/267 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P+ S+ A+G + IRI++ + A + +K+ ++
Sbjct: 1198 VAFSPNGSLIASGSADKTIRIWDTR---------ADAEGAKLLRGHMDD----------- 1237
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+ SG D + ++ + E RVWSV +S ++ ASGS D T+
Sbjct: 1238 ------IASGSDDCTICLWNAATGEEVGEPLTGHEERVWSVAFSPNGSLI-ASGSADKTI 1290
Query: 168 QMWDPRCD--GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
++WD R D G K + V V F G+ +V +G +D +D +
Sbjct: 1291 RIWDTRADAEGAKLL-----RGHMDDVYTVAFSADGTRVV-SGSSDGSIRIWDASTGTET 1344
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAG-TDGCLKLWNVNDSR-VIRTYKGHVNNRNFVGLS 283
+ GH+ + + T + +G ++G + +W+ + VI GH ++ V S
Sbjct: 1345 LKPLKGHQGAIFSVAVSPDGTRIASGASNGTICIWDARTGKEVIAPLTGHGDSVRSVAFS 1404
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEP 310
G + GS+ V ++D +P
Sbjct: 1405 P--DGTRIASGSDDGTVRIFDATIADP 1429
>gi|427416256|ref|ZP_18906439.1| WD40 repeat-containing protein [Leptolyngbya sp. PCC 7375]
gi|425758969|gb|EKU99821.1| WD40 repeat-containing protein [Leptolyngbya sp. PCC 7375]
Length = 1353
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 78/333 (23%), Positives = 141/333 (42%), Gaps = 42/333 (12%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICT 96
P A+ +D I I F P A+ + +R++N++ + P+ H K +
Sbjct: 777 PFASHTDDIWSIAFSPDGETIASASSDQTVRLWNLQGNPLGKPLAGHWGHVKTVAF---- 832
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKV--PIFERDEHGGRRVWSVDYSKGD 154
G + SGD G V ++ + ++ P F+ D G +WSV +S D
Sbjct: 833 -----------SADGAWIASGDQGGAVRLWNRQGRLLYPPFQAD--GQSTIWSVAFSP-D 878
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
SG +DG + +W P+ G+ ++T++ + V F P G SL+A+G D
Sbjct: 879 RTQIVSGREDGLLHVWSPQ---GQLLNTLR--GHTGTIMSVVFSPDG-SLIASGGNDNIV 932
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+D + + L +GH V + F D L++ G D +++W+ + V GH
Sbjct: 933 RIWDRQGNLQHQL--EGHTDNVISLAFSPDSRWLISGGDDNTVRVWSRDGQPVGPPLTGH 990
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVC 333
+ ++V G + G E + ++D+ + V + A G V ++
Sbjct: 991 --DYYVYSVAVSPDGNTILSGGEDQTLRLWDM---QTVLLRQ-----ATQLHNGAVHAMA 1040
Query: 334 WRRVGEDECTLVAGGSDGLLHVFVGKKKPLSAQ 366
V D TLV G+DG +++ + L+ Q
Sbjct: 1041 ---VSGDGQTLVTAGADGKINLVPNGGRALTFQ 1070
Score = 40.4 bits (93), Expect = 1.5, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 11/141 (7%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV S+ L ASG +D +++W+ + G ++T+ +A + V V HP L
Sbjct: 1076 VLSVAMSQDGQTL-ASGGEDNVVKLWNRQ---GYGLATL--TAHQEPVNAVAIHP-TQPL 1128
Query: 205 VAAGCADKKAYAYDVRKMVDPV-LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+A+ D +D++ +PV +GH TV + F D L++ D ++LW++
Sbjct: 1129 MASASDDTTIRLWDLQG--NPVGQSIEGHTDTVNTVMFTPDGQRLISGSDDRTIRLWDLE 1186
Query: 263 DSRVIRTYKGHVNNRNFVGLS 283
+ + GH ++ N + S
Sbjct: 1187 GTPIGDPIAGHTDDVNAIAFS 1207
Score = 38.1 bits (87), Expect = 6.8, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD T+++WD +G + + V + F P G + A D+ +D
Sbjct: 1173 SGSDDRTIRLWD--LEGTPIGDPI--AGHTDDVNAIAFSPDGQMFITAS-RDRTLRLWDS 1227
Query: 220 --RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
R MVD F GH V + F D + +V+A D L+LW++ + GH
Sbjct: 1228 NGRPMVDE--PFRGHLSDVVAVTFSPDGEYIVSASRDQTLRLWDLTGKPIGNPLTGH 1282
Score = 37.7 bits (86), Expect = 8.9, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 33/272 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+ +I + F P S+ A+GG +RI++ + L H + D+ +
Sbjct: 908 TGTIMSVVFSPDGSLIASGGNDNIVRIWDRQGNL-QHQLEGHTDN-------------VI 953
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
SL + P + + G D V D + P ++ V+SV S G+ +L S
Sbjct: 954 SLAFSPDSRWLISGGDDNTVRVWSRDGQPVGPPLTGHDY---YVYSVAVSPDGNTIL--S 1008
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
G +D T+++WD + + + + A + + G +LV AG AD K ++
Sbjct: 1009 GGEDQTLRLWDMQTVLLRQATQLHNGAVHAMAVSGD----GQTLVTAG-ADGKI---NLV 1060
Query: 221 KMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
L F GH V + D TL + G D +KLWN + T H N
Sbjct: 1061 PNGGRALTFQGHTNAVLSVAMSQDGQTLASGGEDNVVKLWN-RQGYGLATLTAHQEPVNA 1119
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
V + + L+ S+ + ++D++ G PV
Sbjct: 1120 VAIHPTQ--PLMASASDDTTIRLWDLQ-GNPV 1148
>gi|113475867|ref|YP_721928.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
gi|110166915|gb|ABG51455.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
Length = 464
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 104/234 (44%), Gaps = 32/234 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + I A+G I+I+N+K+ I P +
Sbjct: 137 ADDVKAIAMSKDGQTLASGSYNGVIKIWNLKT--------------GSLKMKIKQPYPII 182
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+L + P G +L SG G + ++L + H + +W++ +S +L ASG
Sbjct: 183 ALAFSP--DGEILASGCKKGNIKTWELNTGKELHSFAAHT-KTIWAIAFSPDGKIL-ASG 238
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR- 220
S D +++W+ + G+ ST++ AV V+F P S +VA D K + + V
Sbjct: 239 SQDQKVKLWE--IEKGQLHSTLE--NHDQAVLSVDFSP-DSKIVAGSSYDSKIHLWQVET 293
Query: 221 -KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW---NVNDSRVIRT 269
K+++ F GH + V ++F D TLV+ TD +KLW N+N ++ T
Sbjct: 294 GKLLE---TFTGHSQAVWSLKFTPDGQTLVSGSTDRNIKLWCLSNLNTQQLQNT 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG Y+GV+ ++L K + + ++ +S +L ASG G ++ W
Sbjct: 149 GQTLASGSYNGVIKIWNL--KTGSLKMKIKQPYPIIALAFSPDGEIL-ASGCKKGNIKTW 205
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK-MVDPVLVF 229
+ + GK + + +A + + F P G ++A+G D+K +++ K + L
Sbjct: 206 E--LNTGKELHSF--AAHTKTIWAIAFSPDGK-ILASGSQDQKVKLWEIEKGQLHSTL-- 258
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT--DGCLKLWNVNDSRVIRTYKGH 273
+ H + V + F D+ + AG+ D + LW V +++ T+ GH
Sbjct: 259 ENHDQAVLSVDF-SPDSKIVAGSSYDSKIHLWQVETGKLLETFTGH 303
>gi|328688645|gb|AEB35934.1| COP1 [Helianthus annuus]
Length = 90
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 4 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 61
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 62 EPSMLVSGSDDCKVKIWCTRQEAS 85
>gi|328688643|gb|AEB35933.1| COP1 [Helianthus annuus]
Length = 96
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRV 63
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 64 EPSMLVSGSDDCKVKIWCTRQEAS 87
>gi|428207876|ref|YP_007092229.1| WD-40 repeat-containing protein [Chroococcidiopsis thermalis PCC
7203]
gi|428009797|gb|AFY88360.1| WD-40 repeat-containing protein [Chroococcidiopsis thermalis PCC
7203]
Length = 1229
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL + P +G +L G D V +D+ + + H R VWSV +S L ASG
Sbjct: 990 SLAFHP--NGYILAGGCDDYTVRLWDILSGKTLHKLQGHTNR-VWSVAFSVDGNFL-ASG 1045
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD T+++W+ + G+C +T+Q + V V F P G +L A+G D+ +D +
Sbjct: 1046 SDDHTIKLWN--TETGECHNTLQ--GHDNWVWAVAFSPDGQTL-ASGSGDRTVKLWDW-Q 1099
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
M H V + F D T+ + +D +KLWNV T +GH + V
Sbjct: 1100 MGKCYQTLQEHTSRVWSVAFSPDGQTVASGSSDYSIKLWNVETGECRHTLQGHTDLIWSV 1159
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G +L GS+ + ++D G+ +
Sbjct: 1160 AFST--DGQILASGSQDETIRLWDANTGKSL 1188
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 43/237 (18%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G++L +GD DG + + + + H +WSV ++ VL AS SDD T+++
Sbjct: 615 TGKLLATGDADGAIRLWQVADWKKLLTLKGHTNW-IWSVMFNPDGSVL-ASASDDKTVRL 672
Query: 170 WDPRCDGGKCV-------------------------STVQPSASRSAVC----------- 193
WD R +C+ STV+ ++ C
Sbjct: 673 WDTRSGECRCILPHTHRIWSVAFSPDGKTIASGSEDSTVKLWHWQTGECYQTLFGHTNWI 732
Query: 194 -CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT 252
+ F P G +L A+G D +DV + + GH V + F ++ + +
Sbjct: 733 RSIAFSPDGKTL-ASGSVDCTVRLWDV-GTGECIKTLQGHTTQVWSVAFSPDGEMLASSS 790
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
D +KLW + +RT GH N V S G ++ GSE + ++DV+ GE
Sbjct: 791 DRTVKLWQTSTGECLRTLCGHTNWIRTVAFS--SGGDMVASGSEDYTIRLWDVQTGE 845
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+L SG+ D V +++E +R HG G RVW+V +S + ASGS D T+ +W+
Sbjct: 916 MLASGNDDKTVRLWNVETGE--CDRTLHGHGNRVWAVAFSPDGQTI-ASGSGDYTIGLWN 972
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
G +T+Q + S V + FHP G ++A GC D +D+ + G
Sbjct: 973 AST--GDRYNTIQ---AYSGVRSLAFHPNG-YILAGGCDDYTVRLWDILSG-KTLHKLQG 1025
Query: 232 HRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
H V + F +D + L + D +KLWN T +GH N V S G
Sbjct: 1026 HTNRVWSVAFSVDGNFLASGSDDHTIKLWNTETGECHNTLQGHDNWVWAVAFS--PDGQT 1083
Query: 291 LGCGSETNQVFVYDVRWGE 309
L GS V ++D + G+
Sbjct: 1084 LASGSGDRTVKLWDWQMGK 1102
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D V +D+ I H +VWSV +S +L +S D T+++W
Sbjct: 741 GKTLASGSVDCTVRLWDVGTGECIKTLQGHT-TQVWSVAFSPDGEMLASS--SDRTVKLW 797
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ G+C+ T+ + + V F G +VA+G D +DV + +
Sbjct: 798 --QTSTGECLRTL--CGHTNWIRTVAFSS-GGDMVASGSEDYTIRLWDV-QTGECCRTLA 851
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS---VWR 286
GH + + F D TL + D +K+WNV D + I+T +G+ + V +
Sbjct: 852 GHTNWIRSVAFSPDGKTLASGSGDHTIKIWNVTDGKCIKTLQGYTSRVWSVAFHPRPLAS 911
Query: 287 H-GGLLGCGSETNQVFVYDVRWGE----------PVWVHDFEP 318
H G+L G++ V +++V GE VW F P
Sbjct: 912 HPTGMLASGNDDKTVRLWNVETGECDRTLHGHGNRVWAVAFSP 954
>gi|353243625|emb|CCA75144.1| hypothetical protein PIIN_09128 [Piriformospora indica DSM 11827]
Length = 1312
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 114/274 (41%), Gaps = 29/274 (10%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV-VAVVDHSKVCDYYICTPAKLS 101
DSI I F P S FA+G IR+++ K + PV H +P
Sbjct: 942 DSIMTIAFSPDGSTFASGSSDGTIRLWDAKEI---QPVGTPCQGHGDSVQAVAFSP---- 994
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFE--RDEHGGRRVWSVDYSKGDPVLGA 159
SG ++ S D + +D + E R GG V ++ +S D L A
Sbjct: 995 --------SGDLIASCSSDETIRLWDATTGRQVGEPLRGHEGG--VDAIAFSP-DGSLLA 1043
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D +++WD R T +V V F P G SL+ +G AD +DV
Sbjct: 1044 SGSVDAEIRLWDVRAHQQL---TTPLRGHHDSVNAVAFSPDG-SLILSGSADNTLRLWDV 1099
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVI-RTYKGHVNNR 277
+ F GH+ + + F D +V+ D L+LWNVN + + +GH +
Sbjct: 1100 NTGQELGEPFLGHKGAIRAVAFSPDGSRVVSGSDDETLRLWNVNSGQPLGPPIRGHEGSV 1159
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
VG S G + GS + +++V G+P+
Sbjct: 1160 RAVGFSP--DGSRIVSGSFDRTIRLWNVETGQPL 1191
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 33/277 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+DS+ I F P S A+G + IR+++++S + + +H ++S
Sbjct: 726 TDSVLAIAFSPDGSKIASGSSDQTIRVWDVESGQIIGEPLQGHEH------------RVS 773
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL + P G + SG +D V +D + P+ E V SV +S + +L AS
Sbjct: 774 SLAFSP--DGSRIVSGSWDFTVRLWDADLGAPVGEPLRGHEEWVTSVAFSP-NGLLVASS 830
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSAS-----RSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S D T+++W+ T QP+ S V V F P GS LV D
Sbjct: 831 SWDKTIRLWE--------AETGQPAGEPLRGHESWVNSVAFSPDGSKLVTTSW-DMTIRL 881
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN-VNDSRVIRTYKGHV 274
++V+ + F+GH V F D +++ D +++W+ N +V +GH
Sbjct: 882 WNVKTGMQLGTAFEGHEDDVNVAVFSPDGSRIISGSLDSTIRVWDPANSKQVGSALQGHH 941
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ + S G GS + ++D + +PV
Sbjct: 942 DSIMTIAFSP--DGSTFASGSSDGTIRLWDAKEIQPV 976
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 131/318 (41%), Gaps = 42/318 (13%)
Query: 19 ARCEWDFNLR----TTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSV 74
A C D +R TT P + I F P S+ A+G + +IR++++++
Sbjct: 1000 ASCSSDETIRLWDATTGRQVGEPLRGHEGGVDAIAFSPDGSLLASGSVDAEIRLWDVRA- 1058
Query: 75 LVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI 134
H ++ ++++ + P G ++ SG D + +D+ +
Sbjct: 1059 -----------HQQLTTPLRGHHDSVNAVAFSP--DGSLILSGSADNTLRLWDVNTGQEL 1105
Query: 135 FERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP-----SASR 189
E + +V +S D SGSDD T+++W+ V++ QP
Sbjct: 1106 GEPFLGHKGAIRAVAFSP-DGSRVVSGSDDETLRLWN--------VNSGQPLGPPIRGHE 1156
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
+V V F P GS +V +G D+ ++V +GH V + F D +V
Sbjct: 1157 GSVRAVGFSPDGSRIV-SGSFDRTIRLWNVETGQPLGKSLEGHEDLVHSLAFSPDGLRIV 1215
Query: 249 TAGTDGCLKLWNV-NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
+A D L+ W+V N +V GH N N V S G L+ GS + +++V
Sbjct: 1216 SASEDKTLRFWDVRNFQQVGEPLLGHQNAVNSVAFSP--DGILVVSGSSDKTIRLWNVNT 1273
Query: 308 G----EPVWVHDFEPVTA 321
G E + HD +P+ A
Sbjct: 1274 GRQSQEMLLDHD-QPIEA 1290
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 127/322 (39%), Gaps = 37/322 (11%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYICTPAKLS 101
DS+ I F S+F +G IR+++ + V P+ D +
Sbjct: 684 DSVRGISFSADGSMFVSGSADTTIRLWDADTGQPVGEPIRGHTD-------------SVL 730
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
++ + P G + SG D + +D+E I E + RV S+ +S D SG
Sbjct: 731 AIAFSP--DGSKIASGSSDQTIRVWDVESGQIIGEPLQGHEHRVSSLAFSP-DGSRIVSG 787
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D T+++WD D G V +P V V F P G LVA+ DK ++
Sbjct: 788 SWDFTVRLWD--ADLGAPVG--EPLRGHEEWVTSVAFSPNG-LLVASSSWDKTIRLWEAE 842
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRT-YKGHVNNRN 278
GH V + F D LVT D ++LWNV + T ++GH ++ N
Sbjct: 843 TGQPAGEPLRGHESWVNSVAFSPDGSKLVTTSWDMTIRLWNVKTGMQLGTAFEGHEDDVN 902
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
S G + GS + + V+D + V + +G S+
Sbjct: 903 VAVFSP--DGSRIISGSLDSTIRVWDPANSKQV----------GSALQGHHDSIMTIAFS 950
Query: 339 EDECTLVAGGSDGLLHVFVGKK 360
D T +G SDG + ++ K+
Sbjct: 951 PDGSTFASGSSDGTIRLWDAKE 972
>gi|158338424|ref|YP_001519601.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158308665|gb|ABW30282.1| WD-repeat protein [Acaryochloris marina MBIC11017]
Length = 346
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + I P A + IR++++KS S+V +
Sbjct: 143 ADDVTAIALSPDGKSLAASAADKTIRLWDLKSG----------SQSQVQKASTV----VL 188
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL + P G+VL G DGVV + + P + H G V SV +S D L ASG
Sbjct: 189 SLAFSP--DGQVLAGGSRDGVVRFWQRDSLSPSVALEGHQGA-VHSVSFSP-DGALLASG 244
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+D +M++W GK + T+Q + V V F P G L A+G D+ +
Sbjct: 245 SEDQSMKVW--HLSQGKLLHTLQ--GHDAPVLSVAFSPDGRKL-ASGSYDRTIKVWHPVS 299
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
P+ GH K+V I+F D TLV++G+D +++W +
Sbjct: 300 G-QPLKNLVGHTKSVQSIQFSPDSQTLVSSGSDATVRVWPI 339
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 128/313 (40%), Gaps = 38/313 (12%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I I P A+G K+ ++N+++ + + A D +SSL
Sbjct: 62 IYAIALSPDGETLASGRYDGKVELWNLRTGNLRQTLQAHED-------------AISSLT 108
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G+ L SG +D + +DL+ + E V ++ S L AS +D
Sbjct: 109 --ISVDGQTLVSGSWDNRISLWDLQTGKHLHTL-EDAADDVTAIALSPDGKSLAASAADK 165
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++WD K S Q + + V + F P G V AG + + R +
Sbjct: 166 -TIRLWDL-----KSGSQSQVQKASTVVLSLAFSPDGQ--VLAGGSRDGVVRFWQRDSLS 217
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
P + +GH+ V + F L+ +G+ D +K+W+++ +++ T +GH + + ++
Sbjct: 218 PSVALEGHQGAVHSVSFSPDGALLASGSEDQSMKVWHLSQGKLLHTLQGH--DAPVLSVA 275
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
G L GS + V+ G+P+ + G SV + D T
Sbjct: 276 FSPDGRKLASGSYDRTIKVWHPVSGQPL-----------KNLVGHTKSVQSIQFSPDSQT 324
Query: 344 LVAGGSDGLLHVF 356
LV+ GSD + V+
Sbjct: 325 LVSSGSDATVRVW 337
>gi|168031665|ref|XP_001768341.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680519|gb|EDQ66955.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 322
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 19/235 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H V SV + + V+ A G+ GT+++
Sbjct: 22 SSRVLVTGGEDHKVNMWAIGKPNAILSLAGHTSA-VESVAFDASEVVVVA-GAASGTIKL 79
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + RS V+FHPFG A+G D +D+R+ + +
Sbjct: 80 WD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRRK-GCIHTY 133
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + + I+F D +V+ G D +KLW++ +++ +K H L H
Sbjct: 134 KGHTRGINSIKFSPDGRWVVSGGEDNVVKLWDLTAGKLMHDFKYHEGQVQ--CLDFHPHE 191
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
LL GS V +D+ FE + +AG + V ++ + G T
Sbjct: 192 FLLATGSADRTVKFFDLE--------TFELIGSAGPDSAGVRAMVFNPDGRTVLT 238
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A S V C++ S ++ G D K + + K + +L GH V + F +
Sbjct: 8 AHSSNVNCLKIGKKSSRVLVTGGEDHKVNMWAIGKP-NAILSLAGHTSAVESVAFDASEV 66
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+V AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 67 VVVAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 124
Query: 306 R 306
R
Sbjct: 125 R 125
>gi|451994620|gb|EMD87090.1| hypothetical protein COCHEDRAFT_1207017 [Cochliobolus
heterostrophus C5]
Length = 359
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 130/311 (41%), Gaps = 45/311 (14%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYY-ICTPAKLSSLKWKPG 108
FDP+ A+G + R I ++ S C+ Y I T K + L
Sbjct: 74 FDPTGQCIASGSMDRSILLWR---------------SSDTCENYGILTGHKQAVLDLHWS 118
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSK-GDPVLGASGSDDGT 166
+VL S D + +D+E I R G V + +D SK G+ VL SGSDDG
Sbjct: 119 RDSKVLFSASADMHLASWDVETGERI--RRHPGHEEVINCMDVSKRGEEVL-VSGSDDGY 175
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+ +WD R V+ +Q +A+C E G+ L G D +D+RK
Sbjct: 176 IGIWDTRTK--DAVTFIQTDFPITAICLAE---AGNELFTGGI-DNDIKVWDLRKQAVTY 229
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHV--NNRNF 279
+ GH TVT ++ D TL++ D ++ W+V R I+TY G RN
Sbjct: 230 TLI-GHTDTVTSLQMSPDNQTLLSNAHDSTVRTWDVRPFAPADRRIQTYDGAPTGQERNL 288
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
+ S G + GS V V++ R G+ +H RG V+ V + +G
Sbjct: 289 LKASWDFKGEKIAAGSGDQSVAVWETRTGK--LLHKLP------GHRGAVNDVRFHPLG- 339
Query: 340 DECTLVAGGSD 350
E LV+ SD
Sbjct: 340 -EPILVSASSD 349
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 31/172 (18%)
Query: 59 TGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGD 118
TGGI I++++++ V + ++ D ++SL+ P + L S
Sbjct: 210 TGGIDNDIKVWDLRKQAVTYTLIGHTD-------------TVTSLQMSP--DNQTLLSNA 254
Query: 119 YDGVVMEYDL------EKKVPIFERDEHGGRRVW---SVDYSKGDPVLGASGSDDGTMQM 169
+D V +D+ ++++ ++ G R S D+ KG+ + A+GS D ++ +
Sbjct: 255 HDSTVRTWDVRPFAPADRRIQTYDGAPTGQERNLLKASWDF-KGEKI--AAGSGDQSVAV 311
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
W+ R GK + + R AV V FHP G ++ + +D+K ++ K
Sbjct: 312 WETRT--GKLLHKL--PGHRGAVNDVRFHPLGEPILVSASSDRKVMVGELGK 359
>gi|357162659|ref|XP_003579480.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Brachypodium distachyon]
Length = 943
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 20/243 (8%)
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
++ + ++ LK TS RVL +G D V + + K I H V SV +
Sbjct: 14 FVAHSSNVNCLKIGRKTS-RVLVTGGEDHKVNLWAIGKPNSISSLPGHTSA-VESVAFDS 71
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
+ V A+G+ GT+++WD + K V T+ + RS V+FHPFG A+G D
Sbjct: 72 TE-VFVAAGAASGTVKLWD--LEEAKIVRTL--TGHRSNCMSVDFHPFGE-FFASGSLDT 125
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D+R+ + + GH + V IRF D +V+ G D +K+W++ +++ +K
Sbjct: 126 NLKIWDIRRK-GCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDSVVKIWDLTAGKLLHEFK 184
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSS 331
H + + H LL GS V +D + FE + + G E V S
Sbjct: 185 SH--DGQIQCIDFHPHEFLLATGSADKTVKFWD--------LETFELIGSTGPEMTGVRS 234
Query: 332 VCW 334
+ +
Sbjct: 235 MTF 237
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 36/225 (16%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSLKWK 106
++F P FA+G + ++I++I+ K C + Y ++++++
Sbjct: 109 VDFHPFGEFFASGSLDTNLKIWDIR--------------RKGCIHTYKGHTRGVNAIRFT 154
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + SG D VV +DL + E H G ++ +D+ + +L A+GS D T
Sbjct: 155 P--DGRWVVSGGEDSVVKIWDLTAGKLLHEFKSHDG-QIQCIDFHPHEFLL-ATGSADKT 210
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
++ WD + + + + P + V + F+P G SL+ K ++++ + D V
Sbjct: 211 VKFWD--LETFELIGSTGPEM--TGVRSMTFNPDGRSLLCGLHESLKVFSWEPIRCHDTV 266
Query: 227 LVFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRV 266
V + R D++ L + C+ +W V+ +R+
Sbjct: 267 --------DVGWSRLSDLNVHEGKLLGCSSNQSCVGIWVVDLTRL 303
>gi|254425808|ref|ZP_05039525.1| hypothetical protein S7335_375 [Synechococcus sp. PCC 7335]
gi|196188231|gb|EDX83196.1| hypothetical protein S7335_375 [Synechococcus sp. PCC 7335]
Length = 1181
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D + + F P+ + A+G +R++++K+ H +D + +
Sbjct: 645 DGVRTVAFSPNGQLLASGSGDSTVRLWDVKNKTCIHVFEGHMDGVRTVAF---------- 694
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR--VWSVDYSKGDPVLGAS 160
++L SG D V +++E+++ +++ G + W+V +S + +
Sbjct: 695 -----SHDSKLLASGSEDCSVRVWNVEERLCLYK---FTGEKNCFWAVAFSPDGKFI--A 744
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV- 219
GS++ +++WD + +C T + R+ + V F P G +A G AD +DV
Sbjct: 745 GSENYLIRLWD--IERQECAHTFE--GHRNWIWAVAFSPDGR-FMATGSADTTVRLWDVQ 799
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
R+ + VL +GH + + F + LV+A DG ++LW + + + ++G+ N
Sbjct: 800 RQQCEQVL--EGHNSWIQSVHFSPEGRNLVSASNDGTIRLWETHSGKCVHVFEGYTNGVL 857
Query: 279 FVGLSVWRHGGLLGCGS-ETNQVFVYDVR 306
V S L+ GS ETN V ++D++
Sbjct: 858 SVTFS--PDSMLVASGSEETNLVRLWDIQ 884
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VWSV +S L A+GS D T+++W+ +CV T + + V V F P S
Sbjct: 899 VWSVAFSSDGKFL-ATGSADTTIRLWN--ISNKECVFTFE--GHTNWVRSVAFDP-SSHY 952
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A+ D + + + + VF+GH V F D + L +A DG ++LW+V+
Sbjct: 953 LASSSEDATVRLWHLHNR-ECIHVFEGHTSWVRSAVFSPDGNCLASASNDGTIRLWDVSK 1011
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHD-------- 315
+ I T++GH N V S G L GS N V ++++R + V V +
Sbjct: 1012 LQCIHTFEGHTNGVWSVAFS--PDGQFLASGSADNTVRLWNLRTNQCVQVFEGHTNWVWP 1069
Query: 316 --FEP---VTAAGSE------------------RGFVSSVCWRRVGEDECTLVAGGSDGL 352
F P + A+GS RG S V D LV+G DG
Sbjct: 1070 VAFSPDGQLLASGSADATVRLWNFQKGKYTRILRGHTSGVRSIHFSSDSLYLVSGSHDGT 1129
Query: 353 LHVF 356
+ ++
Sbjct: 1130 IRIW 1133
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLSSLKWK 106
+ FDPS A+ +R++++ H++ C + + + + S +
Sbjct: 944 VAFDPSSHYLASSSEDATVRLWHL--------------HNRECIHVFEGHTSWVRSAVFS 989
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
P G L S DG + +D+ K + FE +G VWSV +S L ASGS D
Sbjct: 990 P--DGNCLASASNDGTIRLWDVSKLQCIHTFEGHTNG---VWSVAFSPDGQFL-ASGSAD 1043
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W+ R + +CV + + V V F P G L+A+G AD ++ +K
Sbjct: 1044 NTVRLWNLRTN--QCVQVFE--GHTNWVWPVAFSPDGQ-LLASGSADATVRLWNFQKG-K 1097
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+ GH V I F D LV+ DG +++WN + ++
Sbjct: 1098 YTRILRGHTSGVRSIHFSSDSLYLVSGSHDGTIRIWNTQTGTQLNLFQ 1145
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 16/219 (7%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
L ++ W P + L +GD G V + +E + + H + SV +S +L A
Sbjct: 563 LYTVAWSPNRN--FLATGDAIGNVQLWSVENRQQLATFKGHANW-IRSVAFSPNGQLL-A 618
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++WD + C+ + V V F P G L+A+G D +DV
Sbjct: 619 SSSGDSTVRLWDVK--NKTCIHVFE--GHMDGVRTVAFSPNG-QLLASGSGDSTVRLWDV 673
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGC-LKLWNVNDSRVIRTYKGHVNNRN 278
+ + VF+GH V + F L+ +G++ C +++WNV + + + G N
Sbjct: 674 KNKT-CIHVFEGHMDGVRTVAFSHDSKLLASGSEDCSVRVWNVEERLCLYKFTGEKNCFW 732
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
V S G GSE + ++D+ E H FE
Sbjct: 733 AVAFSP---DGKFIAGSENYLIRLWDIERQEC--AHTFE 766
>gi|254414254|ref|ZP_05028021.1| protein kinase domain [Coleofasciculus chthonoplastes PCC 7420]
gi|196178929|gb|EDX73926.1| protein kinase domain [Coleofasciculus chthonoplastes PCC 7420]
Length = 659
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 28/230 (12%)
Query: 57 FATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
TG + I+++N+ + + HS +Y + +P G++L S
Sbjct: 431 LVTGSGDKNIQVWNL---VTQEKNQTLSGHSSFVNYLVISP------------DGKMLIS 475
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP--VLGASGSDDGTMQMWDPRC 174
G D + ++L I H SV+Y + P + SGS D T+++WD
Sbjct: 476 GSADKTIKLWNLATGQLIRTLTGHSS----SVNYLEISPDGKMLVSGSADKTIKLWD--L 529
Query: 175 DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRK 234
G+ + T+ + S+V +E P G +LV+ G ADK +++ + + GH
Sbjct: 530 ATGQLIRTM--TGHSSSVNALEISPDGKTLVS-GSADKTIKLWNLATGRE-IRTMTGHSS 585
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
V + D L + D +KLW++ ++IRT KGH+++ N + +S
Sbjct: 586 FVNALEISPDGQVLASGSADKTIKLWHLATGQLIRTLKGHLSSVNSIAIS 635
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 24/221 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + P + +G + I+++N+ + + + HS +Y +P
Sbjct: 458 SSFVNYLVISPDGKMLISGSADKTIKLWNLAT---GQLIRTLTGHSSSVNYLEISP---- 510
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G++L SG D + +DL I H V +++ S L SG
Sbjct: 511 --------DGKMLVSGSADKTIKLWDLATGQLIRTMTGHSSS-VNALEISPDGKTL-VSG 560
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ G+ + T+ + S V +E P G L A+G ADK + +
Sbjct: 561 SADKTIKLWN--LATGREIRTM--TGHSSFVNALEISPDGQVL-ASGSADKTIKLWHLAT 615
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+ GH +V I D +TLV+ D +KLW V
Sbjct: 616 G-QLIRTLKGHLSSVNSIAISPDGETLVSGSADKTIKLWRV 655
>gi|428308856|ref|YP_007119833.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
gi|428250468|gb|AFZ16427.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 1205
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG DG + +DL + H G+ VWSV +S L +SG+D+ TM++W
Sbjct: 686 GHSLASGSGDGTLRCWDLNTGQCLKMWQAHLGQ-VWSVAFSPQGRTLASSGADN-TMKLW 743
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+C+ T Q + + V V F P G ++A+G D +D+ + V
Sbjct: 744 D--VSTGQCLKTFQ--SDNNQVQSVAFSPDGK-ILASGGNDCLVRCWDINTG-ECFRVCQ 797
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
H + V I F D TL ++ D ++LW+V + ++T + H N + V S
Sbjct: 798 AHTERVLSIAFSPDGKTLASSSEDSTVRLWDVLSGQCLKTLQAHTNRVSSVAFS 851
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G++L G +G + + L + + H V+SV +S +L ASGS DGT+++
Sbjct: 601 NGKLLAMGGTNGEIHLWQLPETQLLITNKGHTSL-VFSVVFSPDSRML-ASGSADGTVKL 658
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD C G+C++ V P +A V F P G SL A+G D +D+ + ++
Sbjct: 659 WD--CSTGQCLN-VLPGHIGNA-WSVAFSPDGHSL-ASGSGDGTLRCWDLNTG-QCLKMW 712
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
H V + F TL ++G D +KLW+V+ + ++T++ N V S G
Sbjct: 713 QAHLGQVWSVAFSPQGRTLASSGADNTMKLWDVSTGQCLKTFQSDNNQVQSVAFS--PDG 770
Query: 289 GLLGCGSETNQVFVYDVRWGE 309
+L G V +D+ GE
Sbjct: 771 KILASGGNDCLVRCWDINTGE 791
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VWSV +S D +L ASGS D T++ WD G+C+ T+Q S V V F G L
Sbjct: 1053 VWSVAFSPSDNIL-ASGSADNTVKFWD--VTTGQCLKTLQ--GHDSMVVSVMFSSDGRHL 1107
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVND 263
A+G D+ +DV + + V GH V + F LD T+ TA D +KLW+
Sbjct: 1108 -ASGSHDRTVRLWDV-STGECLKVLQGHDNWVWSVAFSLDGQTIATASQDETIKLWDAKT 1165
Query: 264 SRVIRT 269
++T
Sbjct: 1166 GDCLKT 1171
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 121/302 (40%), Gaps = 45/302 (14%)
Query: 19 ARCEWDFNLR----------TTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRI 68
A C D+ LR TV +SP +V+ P FA+G R +R+
Sbjct: 858 ASCSEDYTLRLWDANTGQCLKTVYGQTSPVYSVA-------LSPQGETFASGD--RTLRL 908
Query: 69 YNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDL 128
+N K+ + ++ S+ + P G ++ + YD V +D
Sbjct: 909 WNAKT-------------GQCLKSLRELSPRIVSIAYSP--DGHIIATSCYDTSVKLWDA 953
Query: 129 EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
+ H W V S L AS S D T+++W+ + G+C+ T S
Sbjct: 954 TTGQCLKTLQGHTAWS-WGVAISPDGKTL-ASSSGDYTVKLWNIKT--GQCLKTC--SEH 1007
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
+ V V F PF +++A+ AD +D + + GH V + F D ++
Sbjct: 1008 QGWVFRVAFSPF-DNILASASADSTVKLWD-STTGELLRTCTGHESWVWSVAFSPSDNIL 1065
Query: 249 TAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
+G+ D +K W+V + ++T +GH + V + G L GS V ++DV
Sbjct: 1066 ASGSADNTVKFWDVTTGQCLKTLQGH--DSMVVSVMFSSDGRHLASGSHDRTVRLWDVST 1123
Query: 308 GE 309
GE
Sbjct: 1124 GE 1125
>gi|123447904|ref|XP_001312687.1| WD repeat protein [Trichomonas vaginalis G3]
gi|121894543|gb|EAX99757.1| WD repeat protein, putative [Trichomonas vaginalis G3]
Length = 429
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 34/229 (14%)
Query: 51 DPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTS 110
+P + AT R RI+++++ + + H+K ++ ++K+ P +
Sbjct: 144 NPVGDLAATSSYDRTCRIWDLQNAKC---IYLLTGHTK----------EVITIKFDP--T 188
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
+ + SG +D + YD+E I DEH G + +++ +P L SGS D T ++W
Sbjct: 189 SKYVMSGSFDSSCILYDVETGATIHTFDEHAGE-IQCLEFCNTEP-LFISGSADNTARLW 246
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEF-----HPFGSSLVAAGCADKKAYAYDVRKMVDP 225
D R G+CV T++ ++ + V F H F SSL D +D+R+ +
Sbjct: 247 DIR--SGECVFTLR--GHKAEISNVHFDIQGKHIFTSSL------DSSMRVWDIRQSL-A 295
Query: 226 VLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ GH + +D + TA +D K+WNV +I T GH
Sbjct: 296 QYIMKGHEGPIIDTNVSVDGKKVATASSDKTAKIWNVETGELIGTCVGH 344
>gi|332661894|ref|YP_004451363.1| (myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
gi|332337391|gb|AEE54490.1| (Myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
Length = 788
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 11/202 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L +G D +DLE H VWSV +S L A+GS D T ++W
Sbjct: 428 GKRLATGSKDKSAKIWDLESGKQTLNLQGHTAY-VWSVAFSPDGKRL-ATGSQDKTAKIW 485
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + GK +Q SAV V F P L A G D A +D+ +L
Sbjct: 486 D--LEAGKQTLNLQ--GHTSAVWSVAFSPDRKRL-ATGSDDNTAKIWDLDSG-KQILNLQ 539
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D L T D K+W++ + + +GH ++ N V S +G
Sbjct: 540 GHTDDVWSVAFSPDGKRLATGSQDKTAKIWDLQSGKQTLSLQGHTDDVNSVAFSP--NGK 597
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
L GS+ V ++D+ G+
Sbjct: 598 RLATGSQDTTVKIWDLESGKQT 619
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L +G D +DLE H VWSV +S L A+GSDD T ++W
Sbjct: 470 GKRLATGSQDKTAKIWDLEAGKQTLNLQGHTSA-VWSVAFSPDRKRL-ATGSDDNTAKIW 527
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D D GK + +Q V V F P G L A G DK A +D++ L
Sbjct: 528 D--LDSGKQILNLQGHTDD--VWSVAFSPDGKRL-ATGSQDKTAKIWDLQSG-KQTLSLQ 581
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
GH V + F + L T D +K+W++ + T +GH ++
Sbjct: 582 GHTDDVNSVAFSPNGKRLATGSQDTTVKIWDLESGKQTLTLQGHTDD 628
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 85/219 (38%), Gaps = 21/219 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L +G D +DL+ H VWSV +S L A+GSDD + ++W
Sbjct: 302 GKRLATGSEDKTAKIWDLDSGEQTLNLQGHTAG-VWSVAFSPDGKRL-ATGSDDNSAKIW 359
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D D GK +Q A + V V F G L A G D+ A ++ L +
Sbjct: 360 D--LDSGKQTFNLQGHA--AGVWSVAFSHDGKRL-ATGSEDETAKIWNFESG-KQTLNLE 413
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D L T D K+W++ + +GH V S G
Sbjct: 414 GHTAGVWSVAFSADGKRLATGSKDKSAKIWDLESGKQTLNLQGHTAYVWSVAFSP--DGK 471
Query: 290 LLGCGSETNQVFVYDVRWGE----------PVWVHDFEP 318
L GS+ ++D+ G+ VW F P
Sbjct: 472 RLATGSQDKTAKIWDLEAGKQTLNLQGHTSAVWSVAFSP 510
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 63/148 (42%), Gaps = 9/148 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A+GS+D T ++WD + GK + +Q + V V F P G L A G DK A +D
Sbjct: 222 ATGSEDKTAKIWD--LESGKQILNLQGHTAY--VWSVSFSPDGKRL-ATGSQDKTAKIWD 276
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ L GH V F LD L T D K+W+++ +GH
Sbjct: 277 LESG-KQTLNLKGHTAGVWSAAFSLDGKRLATGSEDKTAKIWDLDSGEQTLNLQGHTAGV 335
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDV 305
V S G L GS+ N ++D+
Sbjct: 336 WSVAFSP--DGKRLATGSDDNSAKIWDL 361
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 54/144 (37%), Gaps = 15/144 (10%)
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DV 244
S S+V + F P G L A G DK A +D+ +L GH V + F D
Sbjct: 203 SGHTSSVLSIAFSPDGKRL-ATGSEDKTAKIWDLESG-KQILNLQGHTAYVWSVSFSPDG 260
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
L T D K+W++ + KGH S+ G L GSE ++D
Sbjct: 261 KRLATGSQDKTAKIWDLESGKQTLNLKGHTAGVWSAAFSL--DGKRLATGSEDKTAKIWD 318
Query: 305 VRWGEP----------VWVHDFEP 318
+ GE VW F P
Sbjct: 319 LDSGEQTLNLQGHTAGVWSVAFSP 342
>gi|254417276|ref|ZP_05031020.1| DnaJ domain protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196175929|gb|EDX70949.1| DnaJ domain protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 473
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L ASGSDD T+++W G+ + T + + V V P G ++A+G DK
Sbjct: 286 DGKLIASGSDDKTIKLWS--LAKGRELRTFK--GHTAGVNGVAISPDGK-IIASGSTDKT 340
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKG 272
+ V K + + GH TV + F ++ +G+ DG +KLW ++ R++RT KG
Sbjct: 341 IKLWQVGKARE-LHTLIGHHDTVNGVAFSSDGQIIASGSADGTIKLWQLSSGRILRTLKG 399
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
H + N V S G +L GS + ++ VR G +
Sbjct: 400 HHDTVNGVAFSP--DGQILASGSADKTIKLWQVRKGRKL 436
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASR-SAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SGS DGT+++WD + GK T++ A R V + P G LV+ G DK +
Sbjct: 202 SGSTDGTIKLWDVQT--GKEQRTLKGHAGRFGYVQSIAISPDGKMLVSGGN-DKTIKLWQ 258
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVD---TLVTAGT-DGCLKLWNVNDSRVIRTYKGHV 274
+ + GH I+ + + L+ +G+ D +KLW++ R +RT+KGH
Sbjct: 259 LSTGKER-RTLTGHSGLFAGIKSVTISPDGKLIASGSDDKTIKLWSLAKGRELRTFKGHT 317
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
N V +S G ++ GS + ++ V
Sbjct: 318 AGVNGVAISP--DGKIIASGSTDKTIKLWQV 346
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D T+++W GK V V F G ++A+G AD +
Sbjct: 333 ASGSTDKTIKLWQV----GKARELHTLIGHHDTVNGVAFSSDGQ-IIASGSADGTIKLWQ 387
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+ + GH TV + F D L + D +KLW V R +RT KG
Sbjct: 388 LSSG-RILRTLKGHHDTVNGVAFSPDGQILASGSADKTIKLWQVRKGRKLRTLKG 441
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 243 DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV-GLSVWRHGGLLGCGSETNQVF 301
D +T+V+ TDG +KLW+V + RT KGH +V +++ G +L G +
Sbjct: 196 DRETVVSGSTDGTIKLWDVQTGKEQRTLKGHAGRFGYVQSIAISPDGKMLVSGGNDKTIK 255
Query: 302 VYDVRWGE 309
++ + G+
Sbjct: 256 LWQLSTGK 263
>gi|168024906|ref|XP_001764976.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683785|gb|EDQ70192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 35/272 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS- 102
++ ++F+P + A+G + I ++N++ CD Y+ ++
Sbjct: 21 AVYTMKFNPQGTAIASGSHDKDIFLWNVQGD---------------CDNYMVLKGHRNAV 65
Query: 103 --LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
L W T G+ + S D V +D + + EH V S ++ P L S
Sbjct: 66 LDLVWT--TDGQHIISASPDKTVRAWDAVTGKQVKKMAEHSSF-VNSCCAARRGPPLIIS 122
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDDGT ++WD R G C+ T +AV E G+ + +G D +D+R
Sbjct: 123 GSDDGTAKLWDMRHRG--CIQTFPDKYQVTAVAFSE----GADKIFSGGIDNDIKVWDLR 176
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVN 275
K + + GH +T+T ++ D L+T D L++W++ +R ++ + GH +
Sbjct: 177 KN-EVAMKLQGHTETITSMQLSPDGSYLLTNSMDCTLRVWDMRPYAPQNRCVKIFTGHQH 235
Query: 276 N--RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
N +N + + G + GS V+++D
Sbjct: 236 NFEKNLLRCNWSPDGQKVTSGSADRMVYIWDT 267
>gi|37523920|ref|NP_927297.1| hypothetical protein gll4351 [Gloeobacter violaceus PCC 7421]
gi|35214926|dbj|BAC92292.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
Length = 1184
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 31/269 (11%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+S++ + P GR L +G D V ++ + EH + V+S+ + L A
Sbjct: 778 VSAVAFAP--DGRSLATGSLDRTVRLWETITGQCLKTLQEHTDQ-VFSIAFHPQGHTL-A 833
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS T+++WD + G+C+ T+Q V V F P G +LV+ G D+ +DV
Sbjct: 834 SGSPTQTVKLWD--TESGQCLRTLQ--GKTVTVLAVAFSPHGQTLVS-GSDDRLVRLWDV 888
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
R + V GH + VT + D TL +AG D +K+W+ + +RT + H +
Sbjct: 889 RTG-ECTRVLRGHLRGVTTVAVAPDGRTLASAGADLSVKIWDALSGQCLRTLREHTGSIR 947
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--------WVHD--FEP---VTAAGSE 325
V + G LL GS+ ++D G V W+ F P + A+GS+
Sbjct: 948 SVAFA--PDGRLLASGSQDGTAKLWDPGTGRCVATLRGHTSWIRSVAFAPDGGLLASGSQ 1005
Query: 326 RGFVSSVCW-RRVGEDECTLVAGGSDGLL 353
G ++ W R G EC + G L+
Sbjct: 1006 DG--TARIWDTRTG--ECLQILAGHTYLI 1030
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR L S D V +D + EH G + SV ++ D L ASGS DGT ++W
Sbjct: 913 GRTLASAGADLSVKIWDALSGQCLRTLREHTGS-IRSVAFAP-DGRLLASGSQDGTAKLW 970
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
DP G+CV+T++ S + V F P G L+A+G D A +D R + + +
Sbjct: 971 DP--GTGRCVATLR--GHTSWIRSVAFAPDG-GLLASGSQDGTARIWDTRTG-ECLQILA 1024
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
GH + + F LD L + D ++LW V +RT
Sbjct: 1025 GHTYLICSVAFSLDGQLLASGSQDQTIRLWEVQTGACLRT 1064
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 69/273 (25%), Positives = 112/273 (41%), Gaps = 28/273 (10%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPA 98
A D + + F P ATG + R +R++ + + + +H+
Sbjct: 772 AGHGDWVSAVAFAPDGRSLATGSLDRTVRLW---ETITGQCLKTLQEHTD---------- 818
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVL 157
++ S+ + P G L SG V +D E + R G V +V +S L
Sbjct: 819 QVFSIAFHP--QGHTLASGSPTQTVKLWDTESGQCL--RTLQGKTVTVLAVAFSPHGQTL 874
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
SGSDD +++WD R G+C ++ V V P G +L +AG AD +
Sbjct: 875 -VSGSDDRLVRLWDVRT--GECTRVLR--GHLRGVTTVAVAPDGRTLASAG-ADLSVKIW 928
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNN 276
D + H ++ + F L+ +G+ DG KLW+ R + T +GH +
Sbjct: 929 DALSG-QCLRTLREHTGSIRSVAFAPDGRLLASGSQDGTAKLWDPGTGRCVATLRGHTSW 987
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V + GGLL GS+ ++D R GE
Sbjct: 988 IRSVAFA--PDGGLLASGSQDGTARIWDTRTGE 1018
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSAS--RSAVCCVEFHPFGSSLVAAGCADKKAYA 216
AS S DGT+++WD R G+C++T++ RSA F P GS L +AG D
Sbjct: 623 ASASQDGTVKLWDARI--GQCLATLRGHIGWVRSAA----FAPDGSLLASAG-QDSTVKL 675
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+D + GH V + F D L +AG D +KLW+ R + T +GH
Sbjct: 676 WDA-ATGRCLATLQGHTGVVHSVAFAPDGSLLASAGQDSTVKLWDAATGRCLATLQGH 732
Score = 47.0 bits (110), Expect = 0.015, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G+ S DG V +D + H G V S ++ D L AS D T+++
Sbjct: 618 NGQTFASASQDGTVKLWDARIGQCLATLRGHIGW-VRSAAFAP-DGSLLASAGQDSTVKL 675
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD G+C++T+Q V V F P GS L +AG D +D +
Sbjct: 676 WDAAT--GRCLATLQ--GHTGVVHSVAFAPDGSLLASAG-QDSTVKLWDA-ATGRCLATL 729
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GH + + + F D L +A D +KLWN R + T GH
Sbjct: 730 QGHTEPIRSVVFSPDGHRLASASHDRTVKLWNPATGRCLATLAGH 774
Score = 42.4 bits (98), Expect = 0.34, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 145 VWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
V+SV +S G+ + A G D+ +++W DG + +S VC V F P G +
Sbjct: 568 VFSVAFSPDGEQI--AVGDDNSEIRLWRA-ADGQQQLSC---QGHTDWVCAVAFAPNGQT 621
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+A D +D R + + GH V F D L +AG D +KLW+
Sbjct: 622 FASAS-QDGTVKLWDAR-IGQCLATLRGHIGWVRSAAFAPDGSLLASAGQDSTVKLWDAA 679
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
R + T +GH + V + G LL + + V ++D G
Sbjct: 680 TGRCLATLQGHTGVVHSVAFA--PDGSLLASAGQDSTVKLWDAATG 723
>gi|17230661|ref|NP_487209.1| hypothetical protein all3169 [Nostoc sp. PCC 7120]
gi|17132264|dbj|BAB74868.1| all3169 [Nostoc sp. PCC 7120]
Length = 559
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 28/257 (10%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
W+ N + ++ S + AV+ + F P + AT + I+++++ + V
Sbjct: 296 WELNTQKLLACFSGHSQAVTS----VSFSPQGEILATASDDKTIKLWHLPT---SSEVFT 348
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H+ P K S+ + P +G++L SG +D V +D+ I+ H
Sbjct: 349 LNGHTN--------PVK--SVSFSP--NGQILASGSWDKQVKLWDVTTGKEIYALKAHQ- 395
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+V +V +S +L AS S D T+++W + + S AV + F P G
Sbjct: 396 LQVSAVAFSPQGEIL-ASASFDRTIRLWQITQNHPRYTLIKTLSGHTRAVLAIAFSPDGK 454
Query: 203 SLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
++A G D +D+ +++ +L GH +V + F D TL++A D +KLW
Sbjct: 455 -ILATGSDDNTIKLWDINTGQLIATLL---GHSWSVVAVTFTADNKTLISASWDKTIKLW 510
Query: 260 NVNDSRVIRTYKGHVNN 276
V+ + I T H+++
Sbjct: 511 KVSTTEEIVTLASHLDS 527
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 26/234 (11%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S + P + A+GG + IR++ + + K+ + ++S+
Sbjct: 271 STNSLAISPDGNKLASGGDDKIIRLWELNT-------------QKLLACFSGHSQAVTSV 317
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P G +L + D + + L +F + H V SV +S +L ASGS
Sbjct: 318 SFSP--QGEILATASDDKTIKLWHLPTSSEVFTLNGHTNP-VKSVSFSPNGQIL-ASGSW 373
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK-- 221
D +++WD GK + ++ A + V V F P G ++A+ D+ + + +
Sbjct: 374 DKQVKLWD--VTTGKEIYALK--AHQLQVSAVAFSPQGE-ILASASFDRTIRLWQITQNH 428
Query: 222 -MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ GH + V I F D L T D +KLW++N ++I T GH
Sbjct: 429 PRYTLIKTLSGHTRAVLAIAFSPDGKILATGSDDNTIKLWDINTGQLIATLLGH 482
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG D ++ ++L + + H + V SV +S +L A+ SDD T+++W
Sbjct: 281 GNKLASGGDDKIIRLWELNTQKLLACFSGHS-QAVTSVSFSPQGEIL-ATASDDKTIKLW 338
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
V T+ + + V V F P G ++A+G DK+ +DV + +
Sbjct: 339 --HLPTSSEVFTL--NGHTNPVKSVSFSPNGQ-ILASGSWDKQVKLWDVTTGKE-IYALK 392
Query: 231 GHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSR----VIRTYKGHVNNRNFVGLSVW 285
H+ V+ + F + L +A D ++LW + + +I+T GH R + ++
Sbjct: 393 AHQLQVSAVAFSPQGEILASASFDRTIRLWQITQNHPRYTLIKTLSGH--TRAVLAIAFS 450
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPV 311
G +L GS+ N + ++D+ G+ +
Sbjct: 451 PDGKILATGSDDNTIKLWDINTGQLI 476
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 17/184 (9%)
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
+ D V+ G + G + + P +C+ T+ ++ S + P G+ L A+G
Sbjct: 235 FQSADEVMQVMGIE-GKILHYPPPPSPWQCLHTLTGYSTNS----LAISPDGNKL-ASGG 288
Query: 210 ADK--KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRV 266
DK + + + +K++ F GH + VT + F + L TA D +KLW++ S
Sbjct: 289 DDKIIRLWELNTQKLLA---CFSGHSQAVTSVSFSPQGEILATASDDKTIKLWHLPTSSE 345
Query: 267 IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW---VHDFEPVTAAG 323
+ T GH N V S +G +L GS QV ++DV G+ ++ H + A
Sbjct: 346 VFTLNGHTNPVKSVSFS--PNGQILASGSWDKQVKLWDVTTGKEIYALKAHQLQVSAVAF 403
Query: 324 SERG 327
S +G
Sbjct: 404 SPQG 407
>gi|428307498|ref|YP_007144323.1| WD40 repeat-containing protein [Crinalium epipsammum PCC 9333]
gi|428249033|gb|AFZ14813.1| WD40 repeat-containing protein [Crinalium epipsammum PCC 9333]
Length = 1168
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 28/220 (12%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
++I + F P + AT G K++++N+ L+ + H + +
Sbjct: 640 NTIYTLSFSPDGKIIATAGRDGKVKLWNVNGSLIK----TLTGHQ----------GSVYT 685
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P +G+++ SG DG + + L+ + I H G V++V++S ++ ASGS
Sbjct: 686 VNFSP--NGKIIASGSNDGTIKLWKLDGSL-IKTLTGHQG-SVYTVNFSPNGKII-ASGS 740
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+ +W GK ++T+ + ++ V V F P G ++A+G AD ++V
Sbjct: 741 KDNTVNLWQL---DGKLITTL--TGHQNEVNSVAFSPNG-KMIASGSADTTIKLWEVNGK 794
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+ + GH ++ +RF D T+ +A D ++LW +
Sbjct: 795 L--IKTLKGHSDSIWNVRFSPDGKTIASASLDRSVRLWKL 832
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 118/259 (45%), Gaps = 39/259 (15%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLV----------------DHPVVAVVDH 86
+++ V++F P + + A+G I+I+ V + D ++A
Sbjct: 561 NAVRVVDFSPDNQIIASGSDDGTIKIWQRNGVFIKTLNQGGKVYGVSFSPDGKIIAAGSD 620
Query: 87 SKVCDYYICTPAKLS--------SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERD 138
+ + L +L + P G+++ + DG V +++ + I
Sbjct: 621 NGTIKIWTLEGKSLKIFKDNTIYTLSFSP--DGKIIATAGRDGKVKLWNVNGSL-IKTLT 677
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
H G V++V++S ++ ASGS+DGT+++W + D G + T+ + + +V V F
Sbjct: 678 GHQG-SVYTVNFSPNGKII-ASGSNDGTIKLW--KLD-GSLIKTL--TGHQGSVYTVNFS 730
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLK 257
P G ++A+G D + + + + GH+ V + F ++ +G+ D +K
Sbjct: 731 PNG-KIIASGSKDNTVNLWQLDGKL--ITTLTGHQNEVNSVAFSPNGKMIASGSADTTIK 787
Query: 258 LWNVNDSRVIRTYKGHVNN 276
LW VN ++I+T KGH ++
Sbjct: 788 LWEVN-GKLIKTLKGHSDS 805
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 134 IFERDEHGGRR--VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
I E ++ G + V VD+S + ++ ASGSDDGT+++W G + T+
Sbjct: 550 ISEENQLKGHKNAVRVVDFSPDNQII-ASGSDDGTIKIWQ---RNGVFIKTLNQGGK--- 602
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V V F P G ++AAG + + + + +F + T+ + F D + TA
Sbjct: 603 VYGVSFSPDGK-IIAAGSDNGTIKIWTLEG--KSLKIFKDN--TIYTLSFSPDGKIIATA 657
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
G DG +KLWNVN S +I+T GH + V S +G ++ GS +
Sbjct: 658 GRDGKVKLWNVNGS-LIKTLTGHQGSVYTVNFS--PNGKIIASGSNDGTI 704
>gi|119487581|ref|ZP_01621191.1| Serine/Threonine protein kinase with WD40 repeats [Lyngbya sp. PCC
8106]
gi|119455750|gb|EAW36886.1| Serine/Threonine protein kinase with WD40 repeats [Lyngbya sp. PCC
8106]
Length = 584
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+S+ + F A+G I+++++++ + + HS
Sbjct: 302 SNSVRSVAFSRDSRTLASGSWDNTIKLWDVQT---QREIATLTGHSNGV----------- 347
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L R L SG +D + +D++ + I V SV +S L ASG
Sbjct: 348 -LSVAFSRDSRTLASGSWDNTIKLWDVQTQRQIATLTGRSNS-VRSVAFSPDGRTL-ASG 404
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+ D T+++WD + + ++T+ + ++V V F P G +L A+G DK +DV+
Sbjct: 405 NGDKTIKLWDVQTQ--RQIATL--TGRSNSVRSVAFSPDGRTL-ASGSEDKTIKLWDVQT 459
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + GH V + D TL + G D +KLW+V R I T GH N N V
Sbjct: 460 RRE-ITTLTGHSDWVNSVAISPDGRTLASGGNDKTIKLWDVQTRREIATLTGHSNWVNSV 518
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVR 306
S L GS + + ++DV+
Sbjct: 519 AFSP--DSRTLASGSGDDTIKLWDVQ 542
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 11/194 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR L SG+ D + +D++ + I V SV +S L ASGS+D T+++W
Sbjct: 398 GRTLASGNGDKTIKLWDVQTQRQIATLTGRSNS-VRSVAFSPDGRTL-ASGSEDKTIKLW 455
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + + ++T+ + V V P G +L A+G DK +DV+ + +
Sbjct: 456 DVQTR--REITTL--TGHSDWVNSVAISPDGRTL-ASGGNDKTIKLWDVQTRRE-IATLT 509
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D TL + D +KLW+V R I T N N V S G
Sbjct: 510 GHSNWVNSVAFSPDSRTLASGSGDDTIKLWDVQTQREIATLTRRSNTVNSVAFSP--DGR 567
Query: 290 LLGCGSETNQVFVY 303
L GS N + ++
Sbjct: 568 TLASGSYDNTIKLW 581
>gi|328688651|gb|AEB35937.1| COP1 [Helianthus annuus]
Length = 96
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRV 63
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 64 EPSMLVSGSDDCKVKIWCTRQEAS 87
>gi|367004787|ref|XP_003687126.1| hypothetical protein TPHA_0I01880 [Tetrapisispora phaffii CBS 4417]
gi|357525429|emb|CCE64692.1| hypothetical protein TPHA_0I01880 [Tetrapisispora phaffii CBS 4417]
Length = 1034
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 11/264 (4%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
++ ++F ++ ATG I+I++++ ++ + + + + S+
Sbjct: 707 NMSSLDFSSDYTLAATGFQDSYIKIWSLEGTSINENEQNYSQINSIFKTLVGHSDAVYSV 766
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P + GSGD + D K + ++ E + +W V++S L A+ S
Sbjct: 767 NFSPCNRFLLSGSGDKTARLWSTDTYKGLVSYKGHE---KPIWDVNFSPTGNNLFATASS 823
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T ++W CD V + + S V CV FHP G V G +DK + +D+
Sbjct: 824 DNTARVWS--CDRVYPVRIL--AGHLSDVDCVSFHPNGQ-YVFTGSSDKTSRMWDLSSG- 877
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
D V +F GH VT D L TA DG + +W++ + +++ +GH N + L
Sbjct: 878 DSVRLFIGHSSAVTATAVSPDGRWLSTANEDGTITVWDIGSGKKLKSMRGHGKN-SIYSL 936
Query: 283 SVWRHGGLLGCGSETNQVFVYDVR 306
S + G +L N V V+D++
Sbjct: 937 SYNKTGNILVSSGADNSVRVWDIK 960
>gi|328688611|gb|AEB35917.1| COP1 [Helianthus annuus]
gi|328688613|gb|AEB35918.1| COP1 [Helianthus annuus]
Length = 88
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 4 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 61
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 62 EPSMLVSGSDDCKVKIWCTR 81
>gi|328688563|gb|AEB35893.1| COP1 [Helianthus annuus]
gi|328688565|gb|AEB35894.1| COP1 [Helianthus annuus]
Length = 90
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 4 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 61
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 62 EPSMLVSGSDDCKVKIWCTRQESS 85
>gi|328688467|gb|AEB35845.1| COP1 [Helianthus tuberosus]
Length = 91
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRV 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|428207056|ref|YP_007091409.1| WD40 repeat, subgroup [Chroococcidiopsis thermalis PCC 7203]
gi|428008977|gb|AFY87540.1| WD40 repeat, subgroup [Chroococcidiopsis thermalis PCC 7203]
Length = 1464
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 72/290 (24%), Positives = 135/290 (46%), Gaps = 32/290 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P +G +R++N++ + P + ++ + S+ + P
Sbjct: 1004 VGFSPDGKSIVSGSGDNTLRLWNLQGKAIGKPFIGHTNY-------------VLSVTFSP 1050
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ + SG D V ++L+ + PI + +RV+SV +S + SGSDD ++
Sbjct: 1051 --DGKSIVSGSDDNSVRLWNLQGQ-PIGKPLVGHTQRVYSVAFSPDGKSI-VSGSDDNSV 1106
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV- 226
++WD + G+ + A ++V V F P G S +A+G D ++++ P+
Sbjct: 1107 RLWDLQ---GQPIGK-SFVAYTNSVWSVGFSPDGKS-IASGSGDNSVRLWNLQG--QPIG 1159
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
F GH +V + F L+ +G+ D L+LWN+ + + + GH N N VG S
Sbjct: 1160 KPFVGHTNSVWSVAFSPDGKLIVSGSNDNTLRLWNLQGQPIGKPFVGHTNYVNSVGFS-- 1217
Query: 286 RHGGLLGCGSETNQVFVYDVRW---GEPVWVHDFEPVTAAGSERG-FVSS 331
G L+ GS N + +++++ G+P H ++ A S G F++S
Sbjct: 1218 PDGKLIVSGSGDNTLRLWNLQGKAIGKPFVGHTNYVLSVAFSPDGKFIAS 1267
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 33/279 (11%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICT 96
P +DS+ + F P +G +R+++++ + P H+
Sbjct: 867 PFVGHTDSVQSVAFSPDGKSIVSGSRDSSVRLWDLQGQPIGKPFEG---HTGF------- 916
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+ S+ + P G+ + SG D V +DL+ + PI + E V+SV +S
Sbjct: 917 ---VYSVAFSP--DGKSIVSGSGDSSVRLWDLQGQ-PIGKPFEGHKGFVYSVGFSPDGKS 970
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
+ SGS D T+++W+ + G+ + +P RS V V F P G S+V +G D
Sbjct: 971 I-VSGSGDNTLRLWNLQ---GQAIG--KPFVGHRSFVQSVGFSPDGKSIV-SGSGDNTLR 1023
Query: 216 AYDV--RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+++ + + P F GH V + F D ++V+ D ++LWN+ + + G
Sbjct: 1024 LWNLQGKAIGKP---FIGHTNYVLSVTFSPDGKSIVSGSDDNSVRLWNLQGQPIGKPLVG 1080
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
H V S G + GS+ N V ++D++ G+P+
Sbjct: 1081 HTQRVYSVAFS--PDGKSIVSGSDDNSVRLWDLQ-GQPI 1116
Score = 55.1 bits (131), Expect = 6e-05, Method: Composition-based stats.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 37/270 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P +G +R+++++ + VA + W
Sbjct: 1088 VAFSPDGKSIVSGSDDNSVRLWDLQGQPIGKSFVAYTNSV-----------------WSV 1130
Query: 108 GTS--GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
G S G+ + SG D V ++L+ + PI + VWSV +S D L SGS+D
Sbjct: 1131 GFSPDGKSIASGSGDNSVRLWNLQGQ-PIGKPFVGHTNSVWSVAFSP-DGKLIVSGSNDN 1188
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDV--RKM 222
T+++W+ + G+ + +P + V V F P G L+ +G D +++ + +
Sbjct: 1189 TLRLWNLQ---GQPIG--KPFVGHTNYVNSVGFSPDGK-LIVSGSGDNTLRLWNLQGKAI 1242
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
P F GH V + F + +G+D ++LWN+ + + + GH N+ VG
Sbjct: 1243 GKP---FVGHTNYVLSVAFSPDGKFIASGSDDNSVRLWNLQGQPIGKPFIGHTNSVWSVG 1299
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L+ GS+ N + +++++ G+P+
Sbjct: 1300 FS--PDGKLIVSGSDDNTLRLWNLQ-GQPI 1326
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 123/270 (45%), Gaps = 30/270 (11%)
Query: 40 AVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK 99
A ++S+ + F P A+G +R++N++ + P V H+
Sbjct: 1122 AYTNSVWSVGFSPDGKSIASGSGDNSVRLWNLQGQPIGKPFVG---HTN----------S 1168
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ S+ + P G+++ SG D + ++L+ + PI + V SV +S D L
Sbjct: 1169 VWSVAFSP--DGKLIVSGSNDNTLRLWNLQGQ-PIGKPFVGHTNYVNSVGFSP-DGKLIV 1224
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYD 218
SGS D T+++W+ + GK + +P + V V F P G +A+G D ++
Sbjct: 1225 SGSGDNTLRLWNLQ---GKAIG--KPFVGHTNYVLSVAFSPDGK-FIASGSDDNSVRLWN 1278
Query: 219 VRKMVDPV-LVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNN 276
++ P+ F GH +V + F L+ +G+D L+LWN+ + + + GH ++
Sbjct: 1279 LQG--QPIGKPFIGHTNSVWSVGFSPDGKLIVSGSDDNTLRLWNLQGQPIGKPFVGHTDS 1336
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
V S G + GS N + ++D++
Sbjct: 1337 VFSVAFS--PDGKSIVSGSRDNTLRLWDLQ 1364
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 30/203 (14%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+GS DG +Q+WD + GK + +P + +V V F P G S+V +G D +D
Sbjct: 847 TGSSDGNLQLWDRK---GKAIG--KPFVGHTDSVQSVAFSPDGKSIV-SGSRDSSVRLWD 900
Query: 219 VRKMVDPV-LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
++ P+ F+GH V + F D ++V+ D ++LW++ + + ++GH
Sbjct: 901 LQG--QPIGKPFEGHTGFVYSVAFSPDGKSIVSGSGDSSVRLWDLQGQPIGKPFEGHKGF 958
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRW---GEPVWVHDFEPVTAAGSERGFVSSVC 333
VG S G + GS N + +++++ G+P H R FV SV
Sbjct: 959 VYSVGFS--PDGKSIVSGSGDNTLRLWNLQGQAIGKPFVGH-----------RSFVQSVG 1005
Query: 334 WRRVGEDECTLVAGGSDGLLHVF 356
+ G+ ++V+G D L ++
Sbjct: 1006 FSPDGK---SIVSGSGDNTLRLW 1025
>gi|433604670|ref|YP_007037039.1| hypothetical protein BN6_28570 [Saccharothrix espanaensis DSM 44229]
gi|407882523|emb|CCH30166.1| hypothetical protein BN6_28570 [Saccharothrix espanaensis DSM 44229]
Length = 1425
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 37/270 (13%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD RT + + P + + + F P S A G + +R++++ + PV
Sbjct: 827 WDVATRTPLGA---PLTGHTGPVVGVAFSPDGSTLAGVGDDKTLRLWDVAT---RDPVGP 880
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI---FERDE 139
+ H + +P GR+L + +G V +D + PI +
Sbjct: 881 PLQHDSGLNQVAFSP------------DGRLLATAADNGQVRLWDAVTRTPIGGPLGLET 928
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP--RCDGGKCVSTVQPSASRSAVCCVEF 197
H V+ + +S +L A+G++DG ++ WD R + G + + S+ + V F
Sbjct: 929 H--VPVFGLAFSPDSRIL-ATGNNDGELRTWDTGTRDEIGDPIQ----AHSQQFLTDVAF 981
Query: 198 HPFGSSLVAAGC-ADKKAYAYDVRKMV-DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDG 254
P G++++ AG A K + + R +V DP+L GH V RF D TL T G DG
Sbjct: 982 SPDGNTVITAGNDASAKLWDVETRSLVGDPLL---GHSGPVYGARFSFDGRTLATTGADG 1038
Query: 255 CLKLWNVNDSRVI-RTYKGHVNNRNFVGLS 283
++LW+ D R I GHV V S
Sbjct: 1039 TVRLWDARDHRPIGHPLVGHVGGVARVAFS 1068
>gi|353239502|emb|CCA71411.1| related to WD40-repeat protein (notchless protein) [Piriformospora
indica DSM 11827]
Length = 1483
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 143/331 (43%), Gaps = 51/331 (15%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYIC 95
P D + +EF P S +G + +R+++ + L+ P+ I
Sbjct: 810 PFEGHEDWVLAVEFSPDGSQIVSGSRDQTVRVWDAATGHLLGEPL-------------IG 856
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
++S++ P +S V SG D + +D + E V +V +S D
Sbjct: 857 HEGEVSAIAISPDSSYIV--SGSSDKTIRLWDAATGKSLGEPLVGHEYAVEAVAFSP-DG 913
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQP-----SASRSAVCCVEFHPFGSSLVAAGCA 210
+ SGSDDGT+++WD V T +P AV V F P G L+A+G
Sbjct: 914 LRVISGSDDGTIRLWD--------VDTRKPLGEPIEGHEDAVRAVAFSPDG-LLIASGSK 964
Query: 211 DKKAYAYDVRK---MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRV 266
D +D + + DP F+GHR +V + F D +V+ D L+LW+VN +
Sbjct: 965 DNTIRLWDAKTGQPLGDP---FEGHRSSVVAVAFSPDGSRIVSGSWDYTLRLWDVNTGQP 1021
Query: 267 I-RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
+ R ++GH V S G + GS + + ++D G+P+ SE
Sbjct: 1022 LGRPFEGHEEGVYTVAFS--PDGSRVISGSNDDTIRLWDAETGQPLG-------ELLESE 1072
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
V++V + R D +V+G +DG++ V+
Sbjct: 1073 DDTVNAVQFSR---DGSRIVSGSNDGMVRVW 1100
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 148/350 (42%), Gaps = 50/350 (14%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + R + P D++ + F P + A+G IR+++ K+
Sbjct: 928 WDVDTRKPLGE---PIEGHEDAVRAVAFSPDGLLIASGSKDNTIRLWDAKT--------- 975
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI---FERDE 139
+ D + + + ++ + P S V GS DY + +D+ P+ FE E
Sbjct: 976 ---GQPLGDPFEGHRSSVVAVAFSPDGSRIVSGSWDY--TLRLWDVNTGQPLGRPFEGHE 1030
Query: 140 HGGRRVWSVDYSK-GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
G V++V +S G V+ SGS+D T+++WD + G+ + + S + V V+F
Sbjct: 1031 EG---VYTVAFSPDGSRVI--SGSNDDTIRLWD--AETGQPLGELLESEDDT-VNAVQFS 1082
Query: 199 PFGSSLVAAGCADKKAYAYDV---RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDG 254
GS +V+ G D +D + + +P+ GH V + F D + + G D
Sbjct: 1083 RDGSRIVS-GSNDGMVRVWDAVTGQLLGEPLF---GHLDHVLAVAFSPDGSRIASGGADK 1138
Query: 255 CLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVH 314
+ LWNV V +GH++ + S G + S + ++D G+P+
Sbjct: 1139 SIYLWNVATGDVEELIEGHISGVWAIEFS--PDGSQIVSSSGDGTIRLWDAVTGQPLG-- 1194
Query: 315 DFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK-KPL 363
P+ +G SSV D LV+G +D + ++ K +PL
Sbjct: 1195 --RPL------KGHESSVYAVSFSPDGSRLVSGSADQTIRLWNTKTGQPL 1236
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG D + ++ + P+ E E VW+V++S + SGS DGT+++W
Sbjct: 1213 GSRLVSGSADQTIRLWNTKTGQPLGEPLEGHDDTVWAVEFSPNGSQI-VSGSSDGTIRLW 1271
Query: 171 DPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D + K + +P AV V F P GS +V+ CA+ K P+ F
Sbjct: 1272 D--AEARKPLG--EPLKGHEGAVWDVGFSPDGSKIVS--CAEDKGIQLWDATTGQPLGDF 1325
Query: 230 -DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
GH +V+ + F D +++ D ++LWN++
Sbjct: 1326 LIGHVGSVSAVAFSPDGSRILSGSADNTIRLWNID 1360
>gi|254410454|ref|ZP_05024233.1| hypothetical protein MC7420_2969 [Coleofasciculus chthonoplastes PCC
7420]
gi|196182660|gb|EDX77645.1| hypothetical protein MC7420_2969 [Coleofasciculus chthonoplastes PCC
7420]
Length = 1687
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P+ + A+ I+++ +K ++ P+ HS+ +SS+ +
Sbjct: 1337 FSPNGKILASASADNTIKLWQVKGGML-QPIPG---HSQ----------PISSVSFS--A 1380
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G+ + + +D V + + + + + V SV +S L A+GSDD T+++
Sbjct: 1381 NGQRIATASWDNTVKLWTRQGQ--LLKTIAAHQDSVNSVSFSDNGETL-ATGSDDKTIKL 1437
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W+P K + S + V V F P G LV++ ADK + + ++ L
Sbjct: 1438 WNPDGTWQKTL-----SGHKDGVTSVNFSPDGQRLVSSS-ADKTVKLWQIDGKLEKTL-- 1489
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH+ TV + F D + +A D +KLW+ N R+I+T +GH ++ N+V S G
Sbjct: 1490 SGHQGTVWGVSFSPDGSFIASASDDKTVKLWSRN-GRLIKTLRGHTDSVNWVTFS--PDG 1546
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
L+ S V ++ R G+ V P+ +G SV W D +A G
Sbjct: 1547 ELIASASNDGTVNLWS-REGKLV-----RPL------KGHNGSVNWVTFSPDG-NFIASG 1593
Query: 349 SD 350
SD
Sbjct: 1594 SD 1595
Score = 56.2 bits (134), Expect = 3e-05, Method: Composition-based stats.
Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 45/289 (15%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIYN----IKSVLVDHPVVAVVDHSKVCDYYI 94
AA DS+ + F + ATG + I+++N + L H
Sbjct: 1408 AAHQDSVNSVSFSDNGETLATGSDDKTIKLWNPDGTWQKTLSGHK--------------- 1452
Query: 95 CTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
++S+ + P G+ L S D V + ++ K+ G VW V +S D
Sbjct: 1453 ---DGVTSVNFSP--DGQRLVSSSADKTVKLWQIDGKLEKTLSGHQG--TVWGVSFSP-D 1504
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
AS SDD T+++W G+ + T++ +V V F P G L+A+ D
Sbjct: 1505 GSFIASASDDKTVKLWS---RNGRLIKTLR--GHTDSVNWVTFSPDGE-LIASASNDGTV 1558
Query: 215 YAYDVR-KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDG-CLKLWNVNDSRVIRTYKG 272
+ K+V P+ GH +V ++ F + +G+D + LW+ +I ++ G
Sbjct: 1559 NLWSREGKLVRPL---KGHNGSVNWVTFSPDGNFIASGSDDKTVNLWSRQTGHLINSFVG 1615
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV-----WVHDF 316
H + G+S G +L S+ V ++++ + V W+ D+
Sbjct: 1616 HQD--AVFGVSFSPDGNILASASQDTTVILWNLDLADLVERSCSWLEDY 1662
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 49/267 (18%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVD------HPVVAVVDHSKVCDYYICTPAKLS 101
+ F + + A+ + I+++ L++ PV+ + S Y + A +
Sbjct: 1212 VSFSANGQLIASASRDKTIKLWQSDGTLLETLTAHNQPVLDI-SFSPDGQYLVSASADKT 1270
Query: 102 SLKWKPGTSGRVLG--SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W+ T GR+L SG D V+ +V YS D + A
Sbjct: 1271 VKLWR--TDGRLLNTLSGHQDAVI-----------------------AVTYSP-DGQMIA 1304
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD T+++W P G + T+Q A+ + F P G ++A+ AD + V
Sbjct: 1305 SGSDDNTIKLWRP---DGTLIDTLQGHG--KAILGLGFSPNG-KILASASADNTIKLWQV 1358
Query: 220 R-KMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ M+ P+ GH + ++ + F + + TA D +KLW ++++T H ++
Sbjct: 1359 KGGMLQPI---PGHSQPISSVSFSANGQRIATASWDNTVKLW-TRQGQLLKTIAAHQDSV 1414
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYD 304
N V S +G L GS+ + +++
Sbjct: 1415 NSVSFS--DNGETLATGSDDKTIKLWN 1439
Score = 46.6 bits (109), Expect = 0.020, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV +S D L AS S D T+Q+W + G+ ++ V V V F P G L
Sbjct: 1085 VSSVSFSP-DGKLIASASRDKTIQLWSQQ---GEWLNEV--GRHNQGVYAVRFSPQGEIL 1138
Query: 205 VAAGCADK-KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+A + K ++ + R + GH V I F D LV+A D +KLW ++
Sbjct: 1139 ASASEDNTIKLWSREGRLL----RTLTGHGDRVHSISFSPDGQRLVSASEDNTIKLWRID 1194
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
D ++++T GH N + +S +G L+ S +
Sbjct: 1195 DGKLLKTLSGH--NHWVLDVSFSANGQLIASASRDKTI 1230
>gi|428311025|ref|YP_007122002.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
gi|428252637|gb|AFZ18596.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 1195
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/246 (24%), Positives = 114/246 (46%), Gaps = 35/246 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD++G I F+P + A+ + R ++++ + LV +VA +S
Sbjct: 785 SDAVGKIAFNPQGHLLASASLDRTVKLWQLDGTLVKTLLVA--------------KDVVS 830
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ W P G++L S +DG + + L+ + + +++V +S + A+
Sbjct: 831 GVTWSP--DGQILASSSWDGPIALWKLDDS--LLQTLNGHQASIYTVKFSPDGKTI-ATA 885
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W R D G + T A + + V+F P G ++ G Y VR
Sbjct: 886 SRDNTVKLW--RLD-GSLIRTFPKQADK--LFGVDFSPKGDTIATGG------YDSTVRL 934
Query: 222 -MVDPVLV--FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+D L+ F GH+ V + F D +L +AG D +K+W ++ ++ + T +GH ++
Sbjct: 935 WRLDGTLLHTFTGHQGRVFAVDFHPDGQSLASAGEDRTVKVWKIDGTQ-LATLQGHTDHV 993
Query: 278 NFVGLS 283
N V S
Sbjct: 994 NGVIFS 999
Score = 42.7 bits (99), Expect = 0.25, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 27/155 (17%)
Query: 143 RRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS----------A 191
+ VW V +S +GD L ASGS D T+++W K ++ P S +
Sbjct: 612 KAVWGVGFSPRGD--LIASGSGDNTVKLWRK-----KSTQSLNPKPSYTLWHTLKGHTKE 664
Query: 192 VCCVEFHPFGSSLVAAGCADK--KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
V V P + ++A+ DK K ++ D + + GH V + F D +
Sbjct: 665 VTQVAIAP-NNQIIASASKDKTIKLWSTDGKLL----FTLTGHTDEVDSVAFSPDSQIIA 719
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+A D +KLW+ D ++IRT GH + V S
Sbjct: 720 SASKDKTIKLWS-TDGQLIRTLTGHTDRVKNVAFS 753
>gi|281410807|gb|ADA68816.1| HET-R [Podospora anserina]
Length = 252
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 21/205 (10%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D V +D + H G V+SV +S L ASG+DD T+++W
Sbjct: 17 GQRLASGAGDRTVKIWDPASGQCFQTLEGHNGS-VYSVAFSPDGQRL-ASGADDDTVKIW 74
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP----- 225
DP G+C+ T++ R +V V F G L A+G D D K+ DP
Sbjct: 75 DPAS--GQCLQTLE--GHRGSVSSVAFSADGQRL-ASGAGD------DTVKIWDPASGQC 123
Query: 226 VLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ +GHR +V+ + F D L + D +K+W+ + ++T +GH + + V S
Sbjct: 124 LQTLEGHRGSVSSVAFSADGQRLASGAVDRTVKIWDPASGQCLQTLEGHRGSVSSVAFSA 183
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGE 309
G L G+ + V ++D G+
Sbjct: 184 --DGQRLASGAGGDTVKIWDPASGQ 206
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D V +D + + H G V SV +S L ASG+ D T+++W
Sbjct: 59 GQRLASGADDDTVKIWDPASGQCLQTLEGHRGS-VSSVAFSADGQRL-ASGAGDDTVKIW 116
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
DP G+C+ T++ R +V V F G L A+G D+ +D + +
Sbjct: 117 DPAS--GQCLQTLE--GHRGSVSSVAFSADGQRL-ASGAVDRTVKIWDPASG-QCLQTLE 170
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
GHR +V+ + F D L + +K+W+ + ++T +GH + + V S
Sbjct: 171 GHRGSVSSVAFSADGQRLASGAGGDTVKIWDPASGQCLQTLEGHRGSVHSVAFS 224
>gi|328688701|gb|AEB35962.1| COP1 [Helianthus annuus]
Length = 96
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRV 63
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 64 EPSMLVSGSDDCKVKIWYTRQESS 87
>gi|328688469|gb|AEB35846.1| COP1 [Helianthus tuberosus]
gi|328688531|gb|AEB35877.1| COP1 [Helianthus annuus]
gi|328688533|gb|AEB35878.1| COP1 [Helianthus annuus]
gi|328688601|gb|AEB35912.1| COP1 [Helianthus annuus]
Length = 91
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|37521534|ref|NP_924911.1| hypothetical protein glr1965 [Gloeobacter violaceus PCC 7421]
gi|35212532|dbj|BAC89906.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
Length = 1197
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 121/283 (42%), Gaps = 31/283 (10%)
Query: 26 NLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD 85
N + T S S A+S ++ + F P + AT I IR++
Sbjct: 552 NFQQTNFSQSIFTEALS-TVSSVAFSPDGQLLATSEINGTIRLWQAAD------------ 598
Query: 86 HSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGR 143
++ Y + + S+ + P GRVL SG D V +D + + +F+ E R
Sbjct: 599 -AQQLAYCRGHTSWVWSIAFSP--DGRVLASGSADRTVRLWDYRTGQCLKVFQGHEGWVR 655
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
SV + G +L ASGS+D +++W+ D G+C+ T++ + + V F P G
Sbjct: 656 ---SVAFHPGGGIL-ASGSEDAAVRLWE--VDSGRCLLTLRGHSG--WIHAVRFSPNGQW 707
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
L A+ D K + +P+ GH V I F D TL++ D L+LW+V
Sbjct: 708 L-ASSSQDGKIQLWHPESG-EPLQAMQGHTGWVRSIAFAPDGQTLISGSDDQTLRLWDVQ 765
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+++ +GH V S G L GS+ V ++D
Sbjct: 766 RGLLLKCLQGHTGWVRSVDFSA--DGRTLASGSDDQTVRLWDA 806
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 26/259 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F P V A+G R +R+++ ++ + + + S+ + P
Sbjct: 615 IAFSPDGRVLASGSADRTVRLWDYRT-------------GQCLKVFQGHEGWVRSVAFHP 661
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G G +L SG D V ++++ + H G + +V +S L AS S DG +
Sbjct: 662 G--GGILASGSEDAAVRLWEVDSGRCLLTLRGHSGW-IHAVRFSPNGQWL-ASSSQDGKI 717
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
Q+W P + G+ + +Q V + F P G +L++ G D+ +DV++ + +
Sbjct: 718 QLWHP--ESGEPLQAMQ--GHTGWVRSIAFAPDGQTLIS-GSDDQTLRLWDVQRGL-LLK 771
Query: 228 VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH V + F D TL + D ++LW+ + R GH N + V S
Sbjct: 772 CLQGHTGWVRSVDFSADGRTLASGSDDQTVRLWDADSGLCFRVMHGHSNWISSVVFSP-- 829
Query: 287 HGGLLGCGSETNQVFVYDV 305
G LL GS + V ++++
Sbjct: 830 DGRLLTSGSVDHSVRIWEI 848
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 108/273 (39%), Gaps = 62/273 (22%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ I + F P + +G + +RI+ I S H + + H + +
Sbjct: 819 SNWISSVVFSPDGRLLTSGSVDHSVRIWEISS---GHCLRVLQGHG----------SGIW 865
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ ++ G+ L SG D V +D + P+ H V +V +S +L +SG
Sbjct: 866 SVAFR--GDGKTLASGSIDHSVRLWDFSTRQPMRSLQAHTSW-VRTVAFSPDGTLLASSG 922
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQ------------PSASRSA------------------ 191
D T+++WDP D G+C+ T++ P+ + A
Sbjct: 923 QDR-TIKLWDP--DSGRCLKTLRGHTGWVNSLAFSPNGALLASSSVDHSLRIWNVETGQC 979
Query: 192 ----------VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
V V FHP G L +A DK A +D+ + + GH V + F
Sbjct: 980 LGMLQGHTSWVRSVAFHPDGRVLASA-SQDKTARLWDI-ETGRCLWTLQGHTSWVRSVAF 1037
Query: 242 L-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
D TL + DG +KLW+V R+ + GH
Sbjct: 1038 HPDGHTLASGSDDGTVKLWDVQTGRLADSLSGH 1070
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 26/263 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F P +G + +R+++++ L+ + + D+
Sbjct: 741 IAFAPDGQTLISGSDDQTLRLWDVQRGLLLKCLQGHTGWVRSVDF--------------- 785
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR L SG D V +D + + R HG S D L SGS D ++
Sbjct: 786 SADGRTLASGSDDQTVRLWDADSGLCF--RVMHGHSNWISSVVFSPDGRLLTSGSVDHSV 843
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ G C+ +Q S + V F G +L A+G D +D P+
Sbjct: 844 RIWE--ISSGHCLRVLQGHGS--GIWSVAFRGDGKTL-ASGSIDHSVRLWDFSTR-QPMR 897
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
H V + F D L ++G D +KLW+ + R ++T +GH N + S
Sbjct: 898 SLQAHTSWVRTVAFSPDGTLLASSGQDRTIKLWDPDSGRCLKTLRGHTGWVNSLAFSP-- 955
Query: 287 HGGLLGCGSETNQVFVYDVRWGE 309
+G LL S + + +++V G+
Sbjct: 956 NGALLASSSVDHSLRIWNVETGQ 978
>gi|328688695|gb|AEB35959.1| COP1 [Helianthus annuus]
gi|328688697|gb|AEB35960.1| COP1 [Helianthus annuus]
Length = 94
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 4 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 61
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 62 EPSMLVSGSDDCKVKIWCTRQESS 85
>gi|359459846|ref|ZP_09248409.1| WD repeat-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 1207
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 69/248 (27%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
V+ +G D + +DL + H GR V SV +S L ASGSDDGT+++WD
Sbjct: 718 VMVTGSEDQTLKIWDLTTGECLQTGKGHHGR-VRSVAFSHDGDYL-ASGSDDGTVKLWDF 775
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL-VFDG 231
+ C+ T + RS V V F P + ++A+G AD+ +D + D L G
Sbjct: 776 QT--ALCLQTYE--GHRSGVYSVAFSP-TAPILASGSADQTVKLWDCQ--ADQCLRTLQG 828
Query: 232 HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH--G 288
H + + F D TL D ++LWN ++ +RT++GH + L V H G
Sbjct: 829 HTNQIFSLAFHPDGQTLACVTLDQTVRLWNWQTTQCLRTWQGHTD----WALPVVFHPQG 884
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
L+ GS + + ++D W + + R V S+ + +D L++GG
Sbjct: 885 QLIASGSGDSVINLWD--WQQQTAILKLR------DHRSVVRSLAF---SDDGRYLISGG 933
Query: 349 SDGLLHVF 356
+D + ++
Sbjct: 934 TDQTVRIW 941
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 101/260 (38%), Gaps = 58/260 (22%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG DG V +D + + + + H V+SV +S P+L ASGS D T+++W
Sbjct: 758 GDYLASGSDDGTVKLWDFQTALCLQTYEGHRSG-VYSVAFSPTAPIL-ASGSADQTVKLW 815
Query: 171 DPRCDGGKCVSTVQPSASR----------SAVCCVE------------------------ 196
D C +C+ T+Q ++ + CV
Sbjct: 816 D--CQADQCLRTLQGHTNQIFSLAFHPDGQTLACVTLDQTVRLWNWQTTQCLRTWQGHTD 873
Query: 197 ------FHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVT 249
FHP G L+A+G D +D ++ +L HR V + F D L++
Sbjct: 874 WALPVVFHPQGQ-LIASGSGDSVINLWDWQQQT-AILKLRDHRSVVRSLAFSDDGRYLIS 931
Query: 250 AGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL-SVWRHGGLLGCGSETNQVFVYDVRWG 308
GTD +++WN R +T+ H + V L SV G G V ++ V G
Sbjct: 932 GGTDQTVRIWNCQTGRCEKTFYDHPDWVFAVALASVSGQEGWFASGGGDPDVRLWSVETG 991
Query: 309 E----------PVWVHDFEP 318
+ VW F P
Sbjct: 992 QCQHVLKGHSDQVWSVAFSP 1011
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 45/318 (14%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
FH Q A + + WD+ +T + + V + F +GG
Sbjct: 880 FHPQGQLIASGSGDSVINLWDWQQQTAILKLRDHRSVVRS----LAFSDDGRYLISGGTD 935
Query: 64 RKIRIYNIKS-----VLVDHP--VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
+ +RI+N ++ DHP V AV L+S+ + G G
Sbjct: 936 QTVRIWNCQTGRCEKTFYDHPDWVFAVA---------------LASVSGQEGWFAS--GG 978
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDG 176
GD D V + +E H + VWSV +S L ASGS D T+++WD +
Sbjct: 979 GDPD--VRLWSVETGQCQHVLKGHSDQ-VWSVAFSPDRQSL-ASGSTDQTVRLWDVQT-- 1032
Query: 177 GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV 236
G+C+ ++ R + + +HP G ++A+G D + V + + H+ +
Sbjct: 1033 GECLQVLRGHCDR--IYSIAYHPDGQ-ILASGSQDHTVKLWHV-DTGECLQTLTDHQSWI 1088
Query: 237 TYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
+ F + L + D +KLW+V + ++T GH V S R L
Sbjct: 1089 FAVAFSPSNASQPSILASGSHDHTIKLWDVQTGKCLKTLCGHTQLVCSVAFSPDRQ--YL 1146
Query: 292 GCGSETNQVFVYDVRWGE 309
GS+ V V+D++ G+
Sbjct: 1147 VSGSQDQSVRVWDLQTGD 1164
Score = 47.0 bits (110), Expect = 0.015, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQ-----------PSASRSAVC 193
V+SV ++ D L ASGS DGT ++W + G+C+ T + P S SA
Sbjct: 658 VFSVAFNH-DGTLLASGSGDGTAKLW--QTHSGQCLQTCEGHQGWIRSVAMPPQSASA-- 712
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGT 252
HP +V G D+ +D+ + + GH V + F D D L +
Sbjct: 713 ----HPPPVVMVT-GSEDQTLKIWDLTTG-ECLQTGKGHHGRVRSVAFSHDGDYLASGSD 766
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
DG +KLW+ + ++TY+GH + V S +L GS V ++D +
Sbjct: 767 DGTVKLWDFQTALCLQTYEGHRSGVYSVAFS--PTAPILASGSADQTVKLWDCQ 818
>gi|328688675|gb|AEB35949.1| COP1 [Helianthus annuus]
Length = 96
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRV 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|328688447|gb|AEB35835.1| COP1 [Helianthus tuberosus]
gi|328688455|gb|AEB35839.1| COP1 [Helianthus tuberosus]
gi|328688457|gb|AEB35840.1| COP1 [Helianthus tuberosus]
gi|328688477|gb|AEB35850.1| COP1 [Helianthus argophyllus]
gi|328688479|gb|AEB35851.1| COP1 [Helianthus argophyllus]
gi|328688481|gb|AEB35852.1| COP1 [Helianthus argophyllus]
gi|328688483|gb|AEB35853.1| COP1 [Helianthus argophyllus]
gi|328688485|gb|AEB35854.1| COP1 [Helianthus argophyllus]
gi|328688487|gb|AEB35855.1| COP1 [Helianthus argophyllus]
gi|328688489|gb|AEB35856.1| COP1 [Helianthus argophyllus]
gi|328688491|gb|AEB35857.1| COP1 [Helianthus argophyllus]
gi|328688493|gb|AEB35858.1| COP1 [Helianthus argophyllus]
gi|328688579|gb|AEB35901.1| COP1 [Helianthus annuus]
gi|328688581|gb|AEB35902.1| COP1 [Helianthus annuus]
gi|328688587|gb|AEB35905.1| COP1 [Helianthus annuus]
gi|328688589|gb|AEB35906.1| COP1 [Helianthus annuus]
gi|328688623|gb|AEB35923.1| COP1 [Helianthus annuus]
gi|328688625|gb|AEB35924.1| COP1 [Helianthus annuus]
Length = 93
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 4 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 61
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 62 EPSMLVSGSDDCKVKIWCTRQESS 85
>gi|66824199|ref|XP_645454.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
gi|74997356|sp|Q55AR8.1|SNR40_DICDI RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein;
Short=U5 snRNP 40 kDa protein; AltName: Full=WD
repeat-containing protein 57 homolog
gi|60473643|gb|EAL71584.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
Length = 355
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 28/264 (10%)
Query: 49 EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPG 108
+F+ + A+GG ++I ++N+ + + +Y + K + L+
Sbjct: 69 KFNSYGTALASGGSDKEIFLWNV--------------YGECINYSVLKGHKGTILELHWS 114
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
T + + D + +D K I EH G V S ++ P L ASGSDD + +
Sbjct: 115 TDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGV-VNSCCPARRGPPLVASGSDDRSAR 173
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
++D R G Q ++VC F L+ G D +D+R DP+
Sbjct: 174 IFDTRSKGS--THLFQHKYPVTSVC---FSDASDQLITGGI-DNVIRVWDIRNQEDPLYT 227
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHVNN--RNFVG 281
H+ T+T D L++ D K+W++ +R I+T+ G NN +N +
Sbjct: 228 LASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIK 287
Query: 282 LSVWRHGGLLGCGSETNQVFVYDV 305
S G +GCGS QV+++D
Sbjct: 288 SSWSIDGRRIGCGSSDRQVYIWDT 311
>gi|414077041|ref|YP_006996359.1| WD-40 repeat-containing protein [Anabaena sp. 90]
gi|413970457|gb|AFW94546.1| WD-40 repeat-containing protein [Anabaena sp. 90]
Length = 196
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 142 GRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG 201
G RV SV++S + ++ ASG DGT+++W+ GK + T + S + V F P G
Sbjct: 8 GGRVRSVNFSP-NGMMIASGHHDGTIKLWNLE---GKNLRTFK--GHNSYITNVRFSPNG 61
Query: 202 SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN 260
++A+ DK + + + F GH VT F D +V+A +DG ++LWN
Sbjct: 62 K-IIASSSQDKTIKLWSLEGQ--EIKTFKGHTAGVTKFNFSPDSKIIVSASSDGTIRLWN 118
Query: 261 VNDSRVIRTYKGH 273
V + + I+T +GH
Sbjct: 119 VENGQEIKTIEGH 131
>gi|392596440|gb|EIW85763.1| WD40 repeat-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 787
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR L SG D V +DL + E VW+V YS ++ ASG DGT ++W
Sbjct: 69 GRHLVSGSNDTTVCVWDLVTYELALDPLEGHTCSVWAVGYSPNGTLI-ASGGRDGTTRLW 127
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
DGGK ++ ++ S S V + F P GS+L A GC D Y +DV + +
Sbjct: 128 --TSDGGKTIAILEHS---SGVRQLSFSPNGSNL-ATGCLDGLIYTWDVSRRKHFLKPIT 181
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSR-VIRTYKGH 273
H+ ++ + + D + T G D +++W+ + RT +GH
Sbjct: 182 AHKAAISTVSYSPDGRFVATGGQDWTVRVWSAETGLPITRTMRGH 226
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 23/201 (11%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASG D +++WD + + R ++ ++ F S++ +G D + + ++
Sbjct: 339 ASGGHDRVIRVWDTETGEESSNAFIY---HRHSIYSLDI-SFDDSMIVSGSDDGQIHLWN 394
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
FDGH +T I+F D +V+ D +++W+ + +RV++ GH N
Sbjct: 395 TNTKEIIKRAFDGHADRITSIKFSADASRVVSGSYDHTIRVWDTHSARVLQVIDGHENMV 454
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--WVHDFEPVTAAGSERGFVSSVCWR 335
N LS+ G L S+ V+D++ + + HD E V+SVC+
Sbjct: 455 N--SLSISYDGTQLASVSKDKTARVWDMQNYTQLASFTHDTE-----------VASVCF- 500
Query: 336 RVGEDECTLVAGGSDGLLHVF 356
D+ L+ G G H++
Sbjct: 501 --SPDDHYLLTGSHSGHAHLW 519
>gi|328688635|gb|AEB35929.1| COP1 [Helianthus annuus]
gi|328688637|gb|AEB35930.1| COP1 [Helianthus annuus]
gi|328688691|gb|AEB35957.1| COP1 [Helianthus annuus]
gi|328688693|gb|AEB35958.1| COP1 [Helianthus annuus]
Length = 84
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 1 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 58
Query: 156 VLGASGSDDGTMQMWDPR 173
+ SGSDD +++W R
Sbjct: 59 SMLVSGSDDCKVKIWCTR 76
>gi|328688497|gb|AEB35860.1| COP1 [Helianthus annuus]
Length = 85
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 2 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 59
Query: 156 VLGASGSDDGTMQMWDPRCDGG 177
+ SGSDD +++W R +
Sbjct: 60 SMLVSGSDDCKVKIWRTRQESS 81
>gi|328688603|gb|AEB35913.1| COP1 [Helianthus annuus]
gi|328688605|gb|AEB35914.1| COP1 [Helianthus annuus]
Length = 93
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 3 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 60
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 61 EPSMLVSGSDDCKVKIWCTRQESS 84
>gi|328688647|gb|AEB35935.1| COP1 [Helianthus annuus]
gi|328688649|gb|AEB35936.1| COP1 [Helianthus annuus]
Length = 90
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 4 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 61
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 62 EPSMLVSGSDDCKVKIWCTRQESS 85
>gi|328688381|gb|AEB35802.1| COP1 [Helianthus petiolaris]
gi|328688383|gb|AEB35803.1| COP1 [Helianthus petiolaris]
gi|328688419|gb|AEB35821.1| COP1 [Helianthus exilis]
gi|328688421|gb|AEB35822.1| COP1 [Helianthus exilis]
gi|328688439|gb|AEB35831.1| COP1 [Helianthus tuberosus]
gi|328688441|gb|AEB35832.1| COP1 [Helianthus tuberosus]
gi|328688451|gb|AEB35837.1| COP1 [Helianthus tuberosus]
gi|328688453|gb|AEB35838.1| COP1 [Helianthus tuberosus]
gi|328688511|gb|AEB35867.1| COP1 [Helianthus annuus]
gi|328688513|gb|AEB35868.1| COP1 [Helianthus annuus]
gi|328688515|gb|AEB35869.1| COP1 [Helianthus annuus]
gi|328688517|gb|AEB35870.1| COP1 [Helianthus annuus]
gi|328688519|gb|AEB35871.1| COP1 [Helianthus annuus]
gi|328688521|gb|AEB35872.1| COP1 [Helianthus annuus]
gi|328688523|gb|AEB35873.1| COP1 [Helianthus annuus]
gi|328688525|gb|AEB35874.1| COP1 [Helianthus annuus]
gi|328688527|gb|AEB35875.1| COP1 [Helianthus annuus]
gi|328688529|gb|AEB35876.1| COP1 [Helianthus annuus]
gi|328688539|gb|AEB35881.1| COP1 [Helianthus annuus]
gi|328688541|gb|AEB35882.1| COP1 [Helianthus annuus]
gi|328688543|gb|AEB35883.1| COP1 [Helianthus annuus]
gi|328688567|gb|AEB35895.1| COP1 [Helianthus annuus]
gi|328688569|gb|AEB35896.1| COP1 [Helianthus annuus]
gi|328688571|gb|AEB35897.1| COP1 [Helianthus annuus]
gi|328688573|gb|AEB35898.1| COP1 [Helianthus annuus]
gi|328688583|gb|AEB35903.1| COP1 [Helianthus annuus]
gi|328688585|gb|AEB35904.1| COP1 [Helianthus annuus]
gi|328688591|gb|AEB35907.1| COP1 [Helianthus annuus]
gi|328688593|gb|AEB35908.1| COP1 [Helianthus annuus]
gi|328688595|gb|AEB35909.1| COP1 [Helianthus annuus]
gi|328688597|gb|AEB35910.1| COP1 [Helianthus annuus]
gi|328688607|gb|AEB35915.1| COP1 [Helianthus annuus]
gi|328688609|gb|AEB35916.1| COP1 [Helianthus annuus]
gi|328688615|gb|AEB35919.1| COP1 [Helianthus annuus]
gi|328688617|gb|AEB35920.1| COP1 [Helianthus annuus]
gi|328688619|gb|AEB35921.1| COP1 [Helianthus annuus]
gi|328688621|gb|AEB35922.1| COP1 [Helianthus annuus]
gi|328688627|gb|AEB35925.1| COP1 [Helianthus annuus]
gi|328688629|gb|AEB35926.1| COP1 [Helianthus annuus]
gi|328688631|gb|AEB35927.1| COP1 [Helianthus annuus]
gi|328688633|gb|AEB35928.1| COP1 [Helianthus annuus]
gi|328688639|gb|AEB35931.1| COP1 [Helianthus annuus]
gi|328688641|gb|AEB35932.1| COP1 [Helianthus annuus]
gi|328688655|gb|AEB35939.1| COP1 [Helianthus annuus]
gi|328688657|gb|AEB35940.1| COP1 [Helianthus annuus]
gi|328688663|gb|AEB35943.1| COP1 [Helianthus annuus]
gi|328688665|gb|AEB35944.1| COP1 [Helianthus annuus]
gi|328688685|gb|AEB35954.1| COP1 [Helianthus annuus]
gi|328688699|gb|AEB35961.1| COP1 [Helianthus annuus]
gi|328688711|gb|AEB35967.1| COP1 [Helianthus annuus]
gi|328688713|gb|AEB35968.1| COP1 [Helianthus annuus]
Length = 96
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|440800094|gb|ELR21137.1| WD repeat protein [Acanthamoeba castellanii str. Neff]
Length = 568
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQ 168
SG L S D M +DL ++ + + G V++V + G+ + A+G D +
Sbjct: 319 SGLFLASASGDATAMLWDLGRQAVVSTKTFKGHEGDVYTVHFHPGENHI-ATGGYDRAVN 377
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR-----KMV 223
+WD R G+ + S ++V V F+P+G+ L+ +G D +D+ K
Sbjct: 378 LWDVRT--GQLMKKF--SGHSASVSHVIFNPYGN-LIISGSKDNTVKFWDITSGLCIKTY 432
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN-NRNFVG 281
L H + VT + + L+T+ D +LW+V +R IR +KGH N ++NF+
Sbjct: 433 STYLGSVFHSRHVTSVAMSHNGSLLLTSSKDNSNRLWDVRTARPIRRFKGHQNTSKNFLR 492
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S + L+ SE ++++D+ G+
Sbjct: 493 ASFGPNESLIVGASEDEMIYIWDIMTGD 520
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS DGT+++W+ + G C+ T+ SR V V P G +A+ D A +D
Sbjct: 282 ASGSSDGTIKIWE--AETGSCLHTLHGHTSR--VWDVSSAPSG-LFLASASGDATAMLWD 336
Query: 219 V-RKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+ R+ V F GH V + F + + T G D + LW+V ++++ + GH +
Sbjct: 337 LGRQAVVSTKTFKGHEGDVYTVHFHPGENHIATGGYDRAVNLWDVRTGQLMKKFSGHSAS 396
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ V + + G L+ GS+ N V +D+ G
Sbjct: 397 VSHVIFNPY--GNLIISGSKDNTVKFWDITSG 426
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 26/205 (12%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV--LGASGSDDGTMQMWD 171
+ +G YD V +D+ + + H SV + +P L SGS D T++ WD
Sbjct: 367 IATGGYDRAVNLWDVRTGQLMKKFSGHSA----SVSHVIFNPYGNLIISGSKDNTVKFWD 422
Query: 172 PRCDGGKCVSTVQPSA-----SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
G C+ T SR H SL+ D +DVR P+
Sbjct: 423 --ITSGLCIKTYSTYLGSVFHSRHVTSVAMSH--NGSLLLTSSKDNSNRLWDVR-TARPI 477
Query: 227 LVFDGHRKTV-TYIR--FLDVDTLVT-AGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
F GH+ T ++R F ++L+ A D + +W++ +++T KGH V
Sbjct: 478 RRFKGHQNTSKNFLRASFGPNESLIVGASEDEMIYIWDIMTGDLLQTLKGHTGT---VYT 534
Query: 283 SVWR-HGGLLG-CGSE-TNQVFVYD 304
+ W H LL CG + T + + YD
Sbjct: 535 TTWNPHQSLLASCGDDGTVKTWWYD 559
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 97/249 (38%), Gaps = 29/249 (11%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + VS+ + + + F P ++ ATGG R + ++++++ +
Sbjct: 335 WDLGRQAVVSTKTFKGH--EGDVYTVHFHPGENHIATGGYDRAVNLWDVRT---GQLMKK 389
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
HS + I P G ++ SG D V +D+ + I + G
Sbjct: 390 FSGHSASVSHVIFNPY------------GNLIISGSKDNTVKFWDITSGLCIKTYSTYLG 437
Query: 143 -----RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-VCCVE 196
R V SV S +L S S D + ++WD R + + + + S
Sbjct: 438 SVFHSRHVTSVAMSHNGSLLLTS-SKDNSNRLWDVRT--ARPIRRFKGHQNTSKNFLRAS 494
Query: 197 FHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTA-GTDGC 255
F P SL+ D+ Y +D+ D + GH TV + +L+ + G DG
Sbjct: 495 FGP-NESLIVGASEDEMIYIWDIM-TGDLLQTLKGHTGTVYTTTWNPHQSLLASCGDDGT 552
Query: 256 LKLWNVNDS 264
+K W ++S
Sbjct: 553 VKTWWYDES 561
>gi|242005460|ref|XP_002423583.1| Katanin p80 WD40-containing subunit B1, putative [Pediculus humanus
corporis]
gi|212506731|gb|EEB10845.1| Katanin p80 WD40-containing subunit B1, putative [Pediculus humanus
corporis]
Length = 775
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 20/194 (10%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS G + +WD + K T + A+ C++FHP+G + +G D +D+
Sbjct: 78 SGSQAGELYIWD--LEANKKTRTF--VGHKDAIKCMDFHPYGD-FLTSGSLDTSIKLWDL 132
Query: 220 RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
R+ + + GH TV +RF D L + G DG +KLW+V R+++ ++ H+ +
Sbjct: 133 RRR-GCISNYRGHILTVNSVRFSPDGLWLASGGDDGVVKLWDVRVGRLLQEFRDHLG--S 189
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
+ + H LL GS V +D + F+ V+ G +G S C
Sbjct: 190 VLSVEFHPHEFLLASGSSDGTVNFWD--------LEKFQLVSTTG--KGSNSINCLHFTP 239
Query: 339 EDECTLVAGGSDGL 352
E EC L AG D L
Sbjct: 240 EGEC-LYAGVEDYL 252
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 15/170 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A + V C+ ++ G DKK + + + VL + H V ++F +
Sbjct: 16 AHEAKVNCLALGQISGRVLVTGGDDKKVNLWAI-GTTNYVLSLNAHTNPVECVKFGHTEE 74
Query: 247 LVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
V +G+ G L +W++ ++ RT+ GH + + +G L GS + ++D+
Sbjct: 75 FVCSGSQAGELYIWDLEANKKTRTFVGHKDA--IKCMDFHPYGDFLTSGSLDTSIKLWDL 132
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHV 355
R + + RG + +V R D L +GG DG++ +
Sbjct: 133 RRRGCI-----------SNYRGHILTVNSVRFSPDGLWLASGGDDGVVKL 171
>gi|428211384|ref|YP_007084528.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
gi|427999765|gb|AFY80608.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 1219
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 67/282 (23%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SDS+ + F P ATG R R+++ L +P+V + HS +
Sbjct: 583 SDSLWTVTFSPDGQTLATGSRDRTARLWD----LAGNPLVTLNGHSD----------SVG 628
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L + DG +DLE + + + +WSV +S +L A+
Sbjct: 629 SVCFSP--DGQTLATSSRDGTACLWDLEGNQLVTFKGHYS--PIWSVMFSPDGQIL-ATA 683
Query: 162 SDDGTMQMWD------PRCDG-------------GKCVSTVQPSAS---------RSAVC 193
S DGT +WD C G G+ ++T+ + + A+C
Sbjct: 684 SYDGTACLWDLEGNQLATCSGHSDSVSTVIFSPDGQIIATISRDGTARLWDLEGNQLAIC 743
Query: 194 C--------VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DV 244
V F+P G ++A D A +D+ + + GH + I F D
Sbjct: 744 SGHLEWIRSVAFNPNGQ-ILATASTDCTARLWDLEG--NQIATCSGHSGPLRSICFSPDG 800
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
TL TA TDG +LW++ + +I T+KGH + SVWR
Sbjct: 801 QTLATASTDGTARLWDLVGNELI-TFKGHSD-------SVWR 834
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD++ + F P+ AT R++++ + + H CD L
Sbjct: 993 SDTVWSVTFSPNGQTLATASYDGTARLWDLGG----NQLAICSGH---CD-------SLW 1038
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLE-KKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
SL + P G+ L + DG +DL ++ IF +VW V +S L A+
Sbjct: 1039 SLTFSP--DGQTLATASTDGTARLWDLAGNELAIFSGHSD---KVWVVSFSPDGQTL-AT 1092
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S DGT ++WD G ++ S V V F P G +L A D A +D+
Sbjct: 1093 ASTDGTARLWDL---AGNELAIF--SGHSDKVWVVSFSPDGQTLATAS-TDGTARLWDLA 1146
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+ + F GH VT + F D TL TA DG LW V
Sbjct: 1147 G--NELATFKGHSDGVTSVSFSPDGQTLATAADDGTACLWRV 1186
Score = 47.4 bits (111), Expect = 0.010, Method: Composition-based stats.
Identities = 80/328 (24%), Positives = 127/328 (38%), Gaps = 48/328 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S++I I+F+P AT R++++ + V HS +
Sbjct: 870 SNTISSIQFNPQGQTLATASSDLTARLWDLGG----NQVAICSGHSDT----------VW 915
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S+ + P +G+ + D +DL ++ IF VWSV +S L A+
Sbjct: 916 SVTFSP--NGQTFATASSDLTARLWDLFGNQLVIFTGHSD---TVWSVTFSPNGQTL-AT 969
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D T ++WD + S + V V F P G +L A D A +D+
Sbjct: 970 ASTDCTARLWDLEGN-----SLAIFTGHSDTVWSVTFSPNGQTLATAS-YDGTARLWDLG 1023
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ + + GH ++ + F D TL TA TDG +LW++ + + + GH +
Sbjct: 1024 G--NQLAICSGHCDSLWSLTFSPDGQTLATASTDGTARLWDLAGNE-LAIFSGHSDKVWV 1080
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGE---------PVWVHDFEP---VTAAGSERG 327
V S G L S ++D+ E VWV F P A S G
Sbjct: 1081 VSFS--PDGQTLATASTDGTARLWDLAGNELAIFSGHSDKVWVVSFSPDGQTLATASTDG 1138
Query: 328 FVSSVCWRRVGEDECTLVAGGSDGLLHV 355
++ W G + T G SDG+ V
Sbjct: 1139 --TARLWDLAGNELATF-KGHSDGVTSV 1163
>gi|17227779|ref|NP_484327.1| hypothetical protein all0283 [Nostoc sp. PCC 7120]
gi|17135261|dbj|BAB77807.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
Length = 1747
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 119/265 (44%), Gaps = 29/265 (10%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
++ + F+P FA+ G I I+ +++ H ++ + ++ ++++
Sbjct: 1434 NVNSVSFNPDGKTFASAGWDGNITIWQRETLA--HSSLSTIQKNQNI---------ITTV 1482
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ P G+ + + D + +D + + I H R + ++ + + + ASGS
Sbjct: 1483 SYSP--DGKTIATASADNTIKLWDSQTQQLIKTLTGHKDR-ITTLSFHPDNQTI-ASGSA 1538
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRK 221
D T+++W R + G+ + T+ + V V F P G L A+G D K + D R
Sbjct: 1539 DKTIKIW--RVNDGQLLRTL--TGHNDEVTSVNFSPDGQFL-ASGSTDNTVKIWQTDGRL 1593
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + GH + ++F D TL +A D +KLW V D ++I GH++
Sbjct: 1594 IKN----ITGHGLAIASVKFSPDSHTLASASWDNTIKLWQVTDGKLINNLNGHID--GVT 1647
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV 305
LS G +L GS N + ++++
Sbjct: 1648 SLSFSPDGEILASGSADNTIKLWNL 1672
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 28/281 (9%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYN-----IKSVLVDHPVVAVVDHSKVCDYYICTP 97
+ I ++F P + A+ + I+ +N +K++ + V ++ S +
Sbjct: 1315 ERITSVKFSPDGKILASASGDKTIKFWNTDGKFLKTIAAHNQQVNSINFSSDSKTLVSAG 1374
Query: 98 AKLSSLKWK-PGT-----SGR------VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR- 144
A + WK GT SGR V S D + V+ +K V I + + ++
Sbjct: 1375 ADSTMKVWKIDGTLIKTISGRGEQIRDVTFSPD-NKVIASASSDKTVRIRQLNYQKSQKS 1433
Query: 145 -VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
V SV ++ ++G D G + +W +ST+Q +++ + V + P G +
Sbjct: 1434 NVNSVSFNPDGKTFASAGWD-GNITIWQRETLAHSSLSTIQ--KNQNIITTVSYSPDGKT 1490
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
+A AD +D + + GH+ +T + F D T+ + D +K+W VN
Sbjct: 1491 -IATASADNTIKLWDSQTQ-QLIKTLTGHKDRITTLSFHPDNQTIASGSADKTIKIWRVN 1548
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVY 303
D +++RT GH + V S G L GS N V ++
Sbjct: 1549 DGQLLRTLTGHNDEVTSVNFS--PDGQFLASGSTDNTVKIW 1587
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 65/294 (22%), Positives = 124/294 (42%), Gaps = 34/294 (11%)
Query: 19 ARCEWDFNL----RTTVSSSS-SPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKS 73
A WD N+ R T++ SS S + I + + P AT I++++ ++
Sbjct: 1448 ASAGWDGNITIWQRETLAHSSLSTIQKNQNIITTVSYSPDGKTIATASADNTIKLWDSQT 1507
Query: 74 VLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVP 133
+ + H ++++L + P + + SG D + + +
Sbjct: 1508 ---QQLIKTLTGHKD----------RITTLSFHP--DNQTIASGSADKTIKIWRVNDGQL 1552
Query: 134 IFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
+ H V SV++S L ASGS D T+++W G+ + + + A+
Sbjct: 1553 LRTLTGHNDE-VTSVNFSPDGQFL-ASGSTDNTVKIWQT---DGRLIKNI--TGHGLAIA 1605
Query: 194 CVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAG 251
V+F P +L +A + K + K+++ + +GH VT + F D + L +
Sbjct: 1606 SVKFSPDSHTLASASWDNTIKLWQVTDGKLINNL---NGHIDGVTSLSFSPDGEILASGS 1662
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
D +KLWN+ ++ +++T GH N + S G L G E V V+++
Sbjct: 1663 ADNTIKLWNLPNATLLKTLLGHPGKINTLAFS--PDGKTLLSGGEDAGVMVWNL 1714
Score = 42.4 bits (98), Expect = 0.37, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 97/223 (43%), Gaps = 29/223 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D I + F P + A+G + I+I+ + + + D +++S
Sbjct: 1519 DRITTLSFHPDNQTIASGSADKTIKIWRVNDGQLLRTLTGHND-------------EVTS 1565
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P G+ L SG D V + + + + + G + SV +S L AS S
Sbjct: 1566 VNFSP--DGQFLASGSTDNTVKIWQTDGR--LIKNITGHGLAIASVKFSPDSHTL-ASAS 1620
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV--R 220
D T+++W + GK ++ + + V + F P G ++A+G AD +++
Sbjct: 1621 WDNTIKLW--QVTDGKLINNL--NGHIDGVTSLSFSPDGE-ILASGSADNTIKLWNLPNA 1675
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
++ +L GH + + F D TL++ G D + +WN++
Sbjct: 1676 TLLKTLL---GHPGKINTLAFSPDGKTLLSGGEDAGVMVWNLD 1715
Score = 42.4 bits (98), Expect = 0.38, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 100/267 (37%), Gaps = 73/267 (27%)
Query: 142 GRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG 201
++V +V +S VL AS SDD T+++WD G+ ++T+ +AS+ V + F G
Sbjct: 1137 AQQVNAVSFSPDGKVL-ASASDDRTVKLWDIH---GQLITTI--TASQKRVTAIAFSHNG 1190
Query: 202 SSLVAAGCADK--KAYAYD--------VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
L A AD K YA D ++K + + F GH VT + F D T+V++
Sbjct: 1191 KYLATAN-ADYTIKLYALDTSCLIVNNLQKCIQLIKTFPGHTDIVTDVVFSPDSKTIVSS 1249
Query: 251 -----------------------------------------GTDGCLKLWNVNDSRVIRT 269
G D +KLW + +I+T
Sbjct: 1250 SLDKTIKLWRIDGSIINTWNAHNGWVNSISFSPDGKMIASGGEDNLVKLWQATNGHLIKT 1309
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFV 329
GH V S G +L S + W D + + + V
Sbjct: 1310 LTGHKERITSVKFS--PDGKILASASGDKTI---------KFWNTDGKFLKTIAAHNQQV 1358
Query: 330 SSVCWRRVGEDECTLVAGGSDGLLHVF 356
+S+ D TLV+ G+D + V+
Sbjct: 1359 NSI---NFSSDSKTLVSAGADSTMKVW 1382
>gi|393246899|gb|EJD54407.1| WD40 repeat-like protein [Auricularia delicata TFB-10046 SS5]
Length = 881
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 35/259 (13%)
Query: 38 NAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTP 97
N + D+I + D D+ A + IR+Y+ ++D +++ HS D +C
Sbjct: 372 NDEIVDAIFLSPSDTPDTHLAVATNSSLIRVYSTSLEMLDASLLSA--HS---DVVLC-- 424
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEY------DLEKKV-PIFERDEHGGRRVWSVDY 150
L PG G++L SG D V + D E+++ E V ++
Sbjct: 425 -----LDRGPG--GKLLASGSKDRTVRIWAYSAPKDDEREIWRCVAFGEGHAESVGALAM 477
Query: 151 SKGDPVLGASGSDDGTMQMWD----PRCDGGKCV---STVQPSASRSAVCCVEFHPFGSS 203
S+ SGS D T++MWD DGG+ V S A + ++ P
Sbjct: 478 SRASGAFLFSGSQDRTVKMWDLSSLSTVDGGEAVKLQSLTTQKAHEKDINSLDVSP-NDK 536
Query: 204 LVAAGCADKKAYAYDV-----RKMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLK 257
L+A G DK A + + R + + GH++ V +RF + L TA D +K
Sbjct: 537 LLATGSQDKTAKIFAIERKGARGEIKLLGTCKGHKRGVWNVRFGRTERVLATASGDKTIK 596
Query: 258 LWNVNDSRVIRTYKGHVNN 276
LWN++D ++T++GH N+
Sbjct: 597 LWNLDDFTCMKTFEGHTNS 615
>gi|212546029|ref|XP_002153168.1| U5 snRNP complex subunit, putative [Talaromyces marneffei ATCC
18224]
gi|210064688|gb|EEA18783.1| U5 snRNP complex subunit, putative [Talaromyces marneffei ATCC
18224]
Length = 358
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 124/309 (40%), Gaps = 41/309 (13%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
FDP+ A+G + R I ++ + + +Y + T K + L +
Sbjct: 73 FDPTAQSIASGSMDRTIMLWRT--------------YEQCENYGVLTGHKGAVLDLQWSR 118
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
R + S D V +DLE I + + H + +D SK L SGSDDG + +
Sbjct: 119 DSRFIFSASADMTVASWDLETGQRIRKHEGHE-EVINCLDISKRGQELLVSGSDDGYIGI 177
Query: 170 WDPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
WDPR + T P + V G+ + G D +D+RK V
Sbjct: 178 WDPRQKAALDFIETDFP------ITAVALSDAGNEIFTGGI-DNDIKVWDIRKKA-VVYS 229
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHV--NNRNFVG 281
GH T+T ++ D TL++ D ++ W++ R +RT+ G +N +
Sbjct: 230 LIGHNDTITSLQISPDSQTLLSNSHDSTVRTWDIRPFAPADRAVRTFDGAPVGIEKNLIR 289
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
S G + GS V V+D + G+ ++ +G V+ V R DE
Sbjct: 290 ASWDPKGEKIAAGSGDRSVVVWDAKSGKLLY--------KLPGHKGTVNDV--RFSPNDE 339
Query: 342 CTLVAGGSD 350
+V+G SD
Sbjct: 340 PIIVSGSSD 348
>gi|392573288|gb|EIW66428.1| hypothetical protein TREMEDRAFT_70068 [Tremella mesenterica DSM
1558]
Length = 825
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 102/241 (42%), Gaps = 26/241 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCD------YYICTPAKLS 101
IEF P S+ A G IR++N+K + V + S V D I +
Sbjct: 475 IEFSPDSSLMAAGSPESCIRLWNLKGEKLKAKSVDPLSGSLVEDEGLPMRKLIGHSGPVY 534
Query: 102 SLKWKP----GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
SL + P +S L S DG V + L+ + HG VW V++ V
Sbjct: 535 SLSFDPLNGSASSPSSLLSASQDGTVRLWSLDTYTNLVAYRGHGRDPVWDVEWGPMG-VY 593
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQP----SASRSAVCCVEFHPFGSSLVAAGCADKK 213
A+ S D T ++W C V P + S V CV+FHP S ++ G D
Sbjct: 594 FATASRDRTARLW--------CSDRVSPVRMYTGHLSDVNCVKFHP-NSLYLSTGSNDAS 644
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
+DV++ + +F GH VT + D L +AG D + LW++ SR I+T G
Sbjct: 645 CRLWDVQRGA-CIRLFLGHVDAVTTLAISPDGKMLASAGLDSNIWLWDLGSSRPIKTMTG 703
Query: 273 H 273
H
Sbjct: 704 H 704
>gi|388502474|gb|AFK39303.1| unknown [Medicago truncatula]
Length = 345
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 32/290 (11%)
Query: 26 NLRTTVSSSSSPNAAVS---DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
N + SS SP ++ ++ ++F+P+ SV A+G ++I ++N+
Sbjct: 36 NGKQRTSSLESPIMLLTGHQSAVYTMKFNPTGSVVASGSHDKEIFLWNV----------- 84
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
H ++ + K + L + G + S D + +D E I + EH
Sbjct: 85 ---HGDCKNFMVLKGHKNAVLDLHWTSDGTQIISASPDKTLRLWDTETGKQIKKMVEHLS 141
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V S ++ P L SGSDDGT ++WD R G ++Q + + V F S
Sbjct: 142 Y-VNSCCPTRMGPPLVVSGSDDGTAKLWDTRQRG-----SIQTFPDKYQITAVSFSD-AS 194
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
+ G D +D+RK + + GH+ +T ++ D L+T G D L +W++
Sbjct: 195 DKIYTGGIDNDVKIWDLRKG-EVTMTLQGHQDMITSMQLSPDGSYLLTNGMDCKLCIWDM 253
Query: 262 N----DSRVIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+R ++ +GH +N +N + G + GS V+++D
Sbjct: 254 RPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 303
>gi|328688653|gb|AEB35938.1| COP1 [Helianthus annuus]
Length = 91
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 64 EPSMLVSGSDDCKVKIWCTRQESS 87
>gi|255724652|ref|XP_002547255.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135146|gb|EER34700.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 455
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 62 IARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDG 121
I + R + ++ ++D ++ V K+C+ YI + A + ++ W G +L S D +G
Sbjct: 204 IYERTRHKSFRNTMLDDTEMSQV-QVKLCNKYIPSSADIFAIDWNQNKEGLLL-SADMNG 261
Query: 122 VVMEYDLEKKVPIFERDEHGGRRVWS--------VDYSKGDPVLGASGSDDGTMQMWDPR 173
++ EYDL K +E R W +++ L A+ D G+++++D R
Sbjct: 262 IINEYDLSK----YESQTLHETRYWENNAIGVNDIEWFPTHDSLFATADDAGSIKVYDIR 317
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
D S V + V + +P ++ +A+G + +D+R PV H
Sbjct: 318 ADN----SIVYNKNIGNNVNSIAINPGYATGLASGDSQGTIKTWDLRNFDAPVGEIRNHT 373
Query: 234 KTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
++T +++ + L ++ TD +KL NV ++ I ++ GH+
Sbjct: 374 DSITQLKWHPKYHNVLGSSSTDHSVKLHNVANNSTIFSHLGHM 416
>gi|328688659|gb|AEB35941.1| COP1 [Helianthus annuus]
gi|328688661|gb|AEB35942.1| COP1 [Helianthus annuus]
Length = 87
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 2 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 59
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 60 EPSMLVSGSDDCKVKIWCTRQESS 83
>gi|190896134|gb|ACE96580.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896136|gb|ACE96581.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896138|gb|ACE96582.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896140|gb|ACE96583.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896142|gb|ACE96584.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896146|gb|ACE96586.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896154|gb|ACE96590.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896162|gb|ACE96594.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896168|gb|ACE96597.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896170|gb|ACE96598.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896172|gb|ACE96599.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896174|gb|ACE96600.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896176|gb|ACE96601.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896178|gb|ACE96602.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896180|gb|ACE96603.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896184|gb|ACE96605.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896186|gb|ACE96606.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896188|gb|ACE96607.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896190|gb|ACE96608.1| U5 snRNP-specific protein-like factor [Populus tremula]
Length = 215
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + S D V +D+E I + EH V S S+ P L SGSDDGT ++W
Sbjct: 23 GSQIISASPDKTVRAWDVETGKQIKKMAEHSSF-VNSCCPSRRGPPLVVSGSDDGTSKLW 81
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R G +Q + + V F S + G D +D+RK + + +
Sbjct: 82 DLRQKGA-----IQTFPDKYQITAVSFSD-ASDKIFTGGIDNDVKVWDIRKG-EVTMTLE 134
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVGLS 283
GH+ +T ++ D L+T G D L +W++ +R ++ ++GH +N +N + S
Sbjct: 135 GHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCS 194
Query: 284 VWRHGGLLGCGSETNQVFVYD 304
G + GS V+++D
Sbjct: 195 WSPDGSKVTAGSADRMVYIWD 215
>gi|149731568|ref|XP_001502155.1| PREDICTED: WD repeat-containing protein 5B-like [Equus caballus]
Length = 330
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P SG L S D V++ YD + + ++ WS D S+
Sbjct: 44 VSSVKFSP--SGEWLASSSADKVIIIWGAYDGKYEKTLYGHSLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKIWDVR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDESVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV ++ D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGVCRIWDAASGQCLKMLVDDDNP 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + L+ A D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PVSFVKFSPNGKYLLIATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
>gi|328688503|gb|AEB35863.1| COP1 [Helianthus annuus]
gi|328688505|gb|AEB35864.1| COP1 [Helianthus annuus]
gi|328688599|gb|AEB35911.1| COP1 [Helianthus annuus]
Length = 92
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|290999687|ref|XP_002682411.1| predicted protein [Naegleria gruberi]
gi|284096038|gb|EFC49667.1| predicted protein [Naegleria gruberi]
Length = 272
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 117/277 (42%), Gaps = 31/277 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH---PVVAVVDHSKVCDYYICTPA 98
S I + P+ + ATG I+I+++ S + DH P V V H K
Sbjct: 2 SKPISTAKISPNSCLLATGSADGTIQIWDLISKVSDHENKPTVKCVGHIK---------- 51
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
++ + W P + + S DG V + E + H + + V YS ++
Sbjct: 52 GVNDVCWSPDS--LFICSASDDGSVRLWSSETGEILMILHGHN-QFAYCVAYSPSGNII- 107
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGS D T+++WD + GKC+ T+ A V V F GS LV + D +D
Sbjct: 108 ASGSYDETVRLWDVK--TGKCLRTLP--AHSDPVTSVSFSRDGSLLVTSS-YDGFCRIWD 162
Query: 219 VRK-MVDPVLVFDGH-------RKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDS-RVIRT 269
++ D H K + +L V T+ ++LW V S R I+
Sbjct: 163 TTTGQCLKTILKDPHDAPPLSCAKLSPHGNYLLVSTMSKETEPAIIRLWQVRPSVRNIKN 222
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
Y GHVNNR V L+ ++ SE V+V+D++
Sbjct: 223 YTGHVNNRFSVNLTFHPKENVILSCSEDGYVYVWDIQ 259
>gi|328688683|gb|AEB35953.1| COP1 [Helianthus annuus]
Length = 91
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 1 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 58
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 59 EPSMLVSGSDDCKVKIWCTRQESS 82
>gi|328688417|gb|AEB35820.1| COP1 [Helianthus exilis]
gi|328688429|gb|AEB35826.1| COP1 [Helianthus exilis]
gi|328688431|gb|AEB35827.1| COP1 [Helianthus exilis]
gi|328688443|gb|AEB35833.1| COP1 [Helianthus tuberosus]
gi|328688545|gb|AEB35884.1| COP1 [Helianthus annuus]
Length = 95
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|359460932|ref|ZP_09249495.1| WD repeat-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 1140
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 69/259 (26%), Positives = 117/259 (45%), Gaps = 35/259 (13%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A TN+ WD N ++ P+A I ++F P A+ + ++I N+
Sbjct: 636 ATATNDGQVWLWDSNGQSLADFRPHPSA-----ITALQFSPDGQSLASASFDQTVQISNL 690
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
+ + + V H V SL W+P G+VL +G YDG + + + K
Sbjct: 691 QGQRI---LQMTVGHGPV-----------RSLHWRP--DGQVLATGSYDGYLHLWSRQGK 734
Query: 132 VPIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS 190
+ R +G R +V+SV +S L AS + D + +WD G+ + T++ +
Sbjct: 735 LI---RSWNGHRTQVFSVVFSANGKQL-ASAAADRLIHIWDSE---GERLETLK--GHQD 785
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD-TLVT 249
V V+F P G LV+ G D +++R+ PV V H + V + F+ D +VT
Sbjct: 786 WVRSVQFSPDGKWLVS-GSEDYTTRLWNLRQK-GPVQVLK-HARPVLSLSFMSPDPVMVT 842
Query: 250 AGTDGCLKLWNVNDSRVIR 268
AG D ++LW+ + +R
Sbjct: 843 AGGDQFIRLWDPSGEERLR 861
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 13/162 (8%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VWSV +S +P++ A+ S D T+++W G+ + ++ R V VEF P G SL
Sbjct: 949 VWSVTFSPTEPIV-ATASADQTVRLWSMT---GQTTAILEGHQGR--VWTVEFSPDGKSL 1002
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
A D A +D+ + F+GHR V +RF D +L T DG L+LW +
Sbjct: 1003 ATAS-DDGTARLWDLEG--QSLAKFEGHRGAVRGVRFSPDGQSLATVSEDGTLRLWELQ- 1058
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
R + +K H N+R F LS G + SE+ V V+ +
Sbjct: 1059 GRQLAEFK-HGNSRLF-DLSFSPDGQYVATASESQGVKVWAI 1098
Score = 43.9 bits (102), Expect = 0.13, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A+ S DGT ++WD + G+ ++ ++ RS V V F P +VA AD+ +
Sbjct: 921 ATASKDGTARLWDWQ---GQPLAILR--GHRSPVWSVTFSP-TEPIVATASADQTVRLWS 974
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ +L +GH+ V + F D +L TA DG +LW++ + + + ++GH
Sbjct: 975 MTGQTTAIL--EGHQGRVWTVEFSPDGKSLATASDDGTARLWDL-EGQSLAKFEGH 1027
>gi|358461869|ref|ZP_09172019.1| WD40 repeat-containing protein [Frankia sp. CN3]
gi|357072554|gb|EHI82090.1| WD40 repeat-containing protein [Frankia sp. CN3]
Length = 502
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 93/221 (42%), Gaps = 21/221 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSS 203
VWSV ++ L A+GS DGT+++WD D + QP AS + AV V F G +
Sbjct: 199 VWSVAFAADGHAL-ATGSGDGTVRLWD-VADPTRPRQIGQPLASHTRAVYSVAFAADGHA 256
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLV---FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
L A G D +DV P + GH V + F D +TL T DG ++LW
Sbjct: 257 L-ATGSGDGTVRLWDVADPTRPRQIGQPLTGHPNGVRSVAFTADGNTLATGSEDGTVRLW 315
Query: 260 NVNDS----RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHD 315
+V DS ++ + GH + V + G L GSE V ++DV
Sbjct: 316 DVADSIRPRQIGQPLSGHASAVYSVAFTA--DGNTLATGSEDGTVRLWDV-------ADS 366
Query: 316 FEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
P GF+S V D L G DG + ++
Sbjct: 367 TRPRQIGQPLTGFISGVRSVAFATDGHALATGSWDGTVQLW 407
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 111 GRVLGSGDYDGVVMEYDLE---KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G L +G DG V +D+ + I + V SV ++ L A+GS+DGT+
Sbjct: 254 GHALATGSGDGTVRLWDVADPTRPRQIGQPLTGHPNGVRSVAFTADGNTL-ATGSEDGTV 312
Query: 168 QMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV------R 220
++WD D + QP S SAV V F G++L A G D +DV R
Sbjct: 313 RLWD-VADSIRPRQIGQPLSGHASAVYSVAFTADGNTL-ATGSEDGTVRLWDVADSTRPR 370
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDS----RVIRTYKGHVNN 276
++ P+ F ++V + D L T DG ++LW+V D+ R+ + H
Sbjct: 371 QIGQPLTGFISGVRSVAFA--TDGHALATGSWDGTVQLWDVADATRPRRIGQPPASHTGA 428
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
V + G L GS V ++DV
Sbjct: 429 VYSVAFTA--DGHALATGSGDGTVRLWDV 455
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 89/251 (35%), Gaps = 30/251 (11%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD T P + + + F + ATG +R++++ + +
Sbjct: 269 WDVADPTRPRQIGQPLTGHPNGVRSVAFTADGNTLATGSEDGTVRLWDVADSIRPRQIGQ 328
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ Y + A G L +G DG V +D+ R G
Sbjct: 329 PLSGHASAVYSVAFTAD-----------GNTLATGSEDGTVRLWDVADST----RPRQIG 373
Query: 143 RR-------VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCC 194
+ V SV ++ L A+GS DGT+Q+WD D + QP AS + AV
Sbjct: 374 QPLTGFISGVRSVAFATDGHAL-ATGSWDGTVQLWD-VADATRPRRIGQPPASHTGAVYS 431
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD---GHRKTVTYIRFL-DVDTLVTA 250
V F G +L A G D +DV P + H V + F D L T
Sbjct: 432 VAFTADGHAL-ATGSGDGTVRLWDVADPTRPRQIGQPPASHTGAVYSVAFTADGHILATG 490
Query: 251 GTDGCLKLWNV 261
G D LW +
Sbjct: 491 GGDRTALLWQM 501
>gi|317140077|ref|XP_003189233.1| NACHT and WD40 domain protein [Aspergillus oryzae RIB40]
Length = 1227
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D + ASGS T+++WDP + G+ + ++ +V V F F S ++A+G D+
Sbjct: 895 DDQMIASGSKANTVKLWDP--NTGQQLRVLE--GHSDSVASVVF-SFDSHIIASGSYDRT 949
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKG 272
+D K + DGH +V + F LV +G+D +KLW+ N + +RT +G
Sbjct: 950 IKLWD-SKTGKQLRTLDGHSDSVVSVAFSPDSQLVVSGSDDNTIKLWDSNTGQQLRTMRG 1008
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
H + V S G L+ GS N + ++D G+
Sbjct: 1009 HSDWVQSVAFS--PDGQLVASGSYDNTIMLWDTNTGQ 1043
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 26/269 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SDS+ + F + A+G R I++++ K+ + + HS +
Sbjct: 926 SDSVASVVFSFDSHIIASGSYDRTIKLWDSKT---GKQLRTLDGHSD----------SVV 972
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P + +++ SG D + +D + H V SV +S D L ASG
Sbjct: 973 SVAFSPDS--QLVVSGSDDNTIKLWDSNTGQQLRTMRGHSDW-VQSVAFSP-DGQLVASG 1028
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+ +WD + G+ + T++ S V V F P G ++A+G DK ++ K
Sbjct: 1029 SYDNTIMLWD--TNTGQHLRTLK--GHSSLVGAVAFSPDGH-MIASGSYDKTVKLWNT-K 1082
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ +GH V + FL D T+ + D +KLW+ +RT +GH V
Sbjct: 1083 TGQQLRTLEGHSGIVRSVTFLPDSQTVASGSYDSTIKLWDTTTGLELRTIRGHSGPVRSV 1142
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S ++ GS N + ++D + G+
Sbjct: 1143 SFS--PDSPMIASGSYDNTIKLWDTKTGQ 1169
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 24/239 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SDS+ + F P + +G I++++ + + + HS D+ +
Sbjct: 968 SDSVVSVAFSPDSQLVVSGSDDNTIKLWDSNT---GQQLRTMRGHS---DW-------VQ 1014
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+++ SG YD +M +D + H V +V +S D + ASG
Sbjct: 1015 SVAFSP--DGQLVASGSYDNTIMLWDTNTGQHLRTLKGHSSL-VGAVAFSP-DGHMIASG 1070
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ + G+ + T++ V V F P S VA+G D +D
Sbjct: 1071 SYDKTVKLWNTKT--GQQLRTLE--GHSGIVRSVTFLP-DSQTVASGSYDSTIKLWDTTT 1125
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNF 279
++ + GH V + F ++ +G+ D +KLW+ + +RT H + F
Sbjct: 1126 GLE-LRTIRGHSGPVRSVSFSPDSPMIASGSYDNTIKLWDTKTGQHLRTLGDHSSPVTF 1183
>gi|328688687|gb|AEB35955.1| COP1 [Helianthus annuus]
gi|328688689|gb|AEB35956.1| COP1 [Helianthus annuus]
Length = 83
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 1 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 58
Query: 156 VLGASGSDDGTMQMWDPR 173
+ SGSDD +++W R
Sbjct: 59 SMLVSGSDDCKVKIWCTR 76
>gi|328688445|gb|AEB35834.1| COP1 [Helianthus tuberosus]
Length = 95
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|168034305|ref|XP_001769653.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679002|gb|EDQ65454.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 359
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 119/272 (43%), Gaps = 35/272 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS- 102
++ ++F+P + A+G + I ++N++ CD Y+ ++
Sbjct: 66 AVYTMKFNPQGTAIASGSHDKDIFLWNVQGD---------------CDNYMVLKGHRNAV 110
Query: 103 --LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
L W + G+ + S D V +D I + EH V S ++ P L S
Sbjct: 111 LDLCWT--SDGQHIISASPDKTVRAWDAVTGKQIKKMAEHS-LYVNSCSAARRGPPLIVS 167
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDDGT ++WD R G C+ T +AV + G+ + +G D +D+R
Sbjct: 168 GSDDGTAKLWDMRHRG--CIQTFPDKYQVTAVAFSD----GADKIFSGGIDNDIKVWDLR 221
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVN 275
K + + GH +T+T ++ D L+T D L++W++ +R ++ + GH +
Sbjct: 222 KN-EVAMKLQGHTETITSMQLSPDGSYLLTNSMDCTLRIWDMRPYAPQNRCVKIFTGHQH 280
Query: 276 N--RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
N +N + + G + GS V+V+D
Sbjct: 281 NFEKNLLRCNWSPDGQKVTSGSADRMVYVWDT 312
>gi|434391881|ref|YP_007126828.1| peptidase C14 caspase catalytic subunit p20 [Gloeocapsa sp. PCC
7428]
gi|428263722|gb|AFZ29668.1| peptidase C14 caspase catalytic subunit p20 [Gloeocapsa sp. PCC
7428]
Length = 605
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSK-GDPVLGASGSDDGTMQ 168
GR L SG D + ++L I R G + VW+V S+ G+ ++ A G++ T++
Sbjct: 379 GRSLVSGSGDKTIKVWNLRTGEAI--RTLTGSQDTVWAVAISQDGNTLVSADGNN--TLK 434
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCA-DKKAYAYDVRKMVDPVL 227
+WD GK + + SR + + P G +L + G D K + + +++
Sbjct: 435 VWD--LPSGKLLRSFAADTSR--LRTIALSPDGQTLASGGQGQDIKIWDVNTGQLIR--- 487
Query: 228 VFDGHR-KTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
H+ K +T D +TL + D +++WN+ R++RT GH ++ N V +S
Sbjct: 488 TLAAHKSKIITVAISPDGETLASGSNDETVEIWNIRTGRLVRTLHGHTDHVNSVAISA-- 545
Query: 287 HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVA 346
G L G+E +V ++ +R G+ +H F+ G V + D+ T+++
Sbjct: 546 DGQFLVSGAEDREVKLWSLRTGQ--LLHTFQ---------GHPGDVYAVAISPDDQTVIS 594
Query: 347 GGSDG 351
G +G
Sbjct: 595 GDKEG 599
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV-TYIRFLDVDTLVTAGTDGCLK 257
PFG+SLVAA + Y+ + +D H KTV + D TLV++ D +K
Sbjct: 302 PFGNSLVAA----PRDYSQTAQTRLD-------HAKTVWSLATTHDGQTLVSSSGDTTIK 350
Query: 258 LWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
+W++ + IRT GH V ++ G L GS + V+++R GE +
Sbjct: 351 VWHLPSGKPIRTLSGHTAAVWSVAIT--PDGRSLVSGSGDKTIKVWNLRTGEAIR----- 403
Query: 318 PVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
T GS+ +V + +D TLV+ + L V+
Sbjct: 404 --TLTGSQ----DTVWAVAISQDGNTLVSADGNNTLKVW 436
>gi|328688667|gb|AEB35945.1| COP1 [Helianthus annuus]
gi|328688669|gb|AEB35946.1| COP1 [Helianthus annuus]
Length = 88
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|328688449|gb|AEB35836.1| COP1 [Helianthus tuberosus]
Length = 93
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 4 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQNVMEYEEHE-KRVWSVDFSRI 61
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 62 EPSMLVSGSDDCKVKIWCTRQESS 85
>gi|328688437|gb|AEB35830.1| COP1 [Helianthus tuberosus]
Length = 91
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 2 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 59
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 60 EPSMLVSGSDDCKVKIWCTRQESS 83
>gi|148655047|ref|YP_001275252.1| WD-40 repeat-containing protein [Roseiflexus sp. RS-1]
gi|148567157|gb|ABQ89302.1| ribosome assembly protein 4 (RSA4) [Roseiflexus sp. RS-1]
Length = 696
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 30/275 (10%)
Query: 38 NAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTP 97
+AAV D I F P + A+G + +R+++ S V + H P
Sbjct: 158 DAAVFD----IAFSPDGRLLASGSPDKTVRLWDAAS---GRLVRTLKGHGDSVFSVAFAP 210
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
GR+L SG D V +D+ + + H V+SV ++ D L
Sbjct: 211 ------------DGRLLASGSPDKTVRLWDVASGQLVRTLEGHTDW-VFSVAFAP-DGRL 256
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGS D T+++WD G+ V ++ +V V F P G L+A+G DK +
Sbjct: 257 LASGSLDKTVRLWD--AASGQLVRALE--GHTDSVLSVAFAPDGR-LLASGSPDKTVRLW 311
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
D V +GH V + F D L + +D ++LW+ +++RT +GH ++
Sbjct: 312 DAASG-QLVRTLEGHTNWVRSVAFAPDGRLLASGSSDKTVRLWDAASGQLVRTLEGHTSD 370
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
N V S G LL S + + D G+ V
Sbjct: 371 VNSVAFS--PDGRLLASASADGTIRLRDAASGQRV 403
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR+L SG D + +D + + H V SV +S D L ASG+ D T+++W
Sbjct: 510 GRLLASGSLDNTIRLWDAASGQLVRTLEGHTSD-VNSVAFSP-DGRLLASGARDSTVRLW 567
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+ + T++ V V F P G L+A+G DK +D V +
Sbjct: 568 D--VASGQLLRTLE--GHTDWVNSVAFSPDGR-LLASGSPDKTVRLWDAASG-QLVRTLE 621
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D L + G D ++LW+V +++RT +GH N + V S G
Sbjct: 622 GHTGRVLSVAFSPDGRLLASGGRDWTVRLWDVQTGQLVRTLEGHTNLVSSVVFS--PDGR 679
Query: 290 LLGCGSETNQVFVYDVRWGEP 310
LL GS+ + + WG P
Sbjct: 680 LLASGSDDGTIRL----WGVP 696
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P + A+G + IR+++ S V + H+ + +P
Sbjct: 500 SVWSVAFSPDGRLLASGSLDNTIRLWDAAS---GQLVRTLEGHTSDVNSVAFSP------ 550
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
GR+L SG D V +D+ + + H V SV +S D L ASGS
Sbjct: 551 ------DGRLLASGARDSTVRLWDVASGQLLRTLEGHTD-WVNSVAFSP-DGRLLASGSP 602
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++WD G+ V T++ R V V F P G L+A+G D +DV+
Sbjct: 603 DKTVRLWD--AASGQLVRTLEGHTGR--VLSVAFSPDG-RLLASGGRDWTVRLWDVQTG- 656
Query: 224 DPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNV 261
V +GH V+ + F L+ +G+ DG ++LW V
Sbjct: 657 QLVRTLEGHTNLVSSVVFSPDGRLLASGSDDGTIRLWGV 695
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 114/281 (40%), Gaps = 42/281 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+DS+ + F P + A+G + +R+++ S V + H+ P
Sbjct: 284 TDSVLSVAFAPDGRLLASGSPDKTVRLWDAAS---GQLVRTLEGHTNWVRSVAFAP---- 336
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
GR+L SG D V +D + + H V SV +S D L AS
Sbjct: 337 --------DGRLLASGSSDKTVRLWDAASGQLVRTLEGHTSD-VNSVAFSP-DGRLLASA 386
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG-----CADKKAYA 216
S DGT+++ D G+ VS ++ V + P G L +A + A
Sbjct: 387 SADGTIRLRD--AASGQRVSALE--GHTDIVAGLSISPDGRLLASAAWDSVISLQEAATG 442
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
VR + +GH V + F L+ +G D ++LW+ +++RT KGH +
Sbjct: 443 RRVRAL-------EGHTDAVFSVAFAPDGRLLASGARDSTVRLWDAASGQLLRTLKGHGS 495
Query: 276 NRNFVGLSVWR-----HGGLLGCGSETNQVFVYDVRWGEPV 311
+ G SVW G LL GS N + ++D G+ V
Sbjct: 496 SH---GSSVWSVAFSPDGRLLASGSLDNTIRLWDAASGQLV 533
>gi|428314261|ref|YP_007125238.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
gi|428255873|gb|AFZ21832.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 1390
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 82/355 (23%), Positives = 138/355 (38%), Gaps = 68/355 (19%)
Query: 44 SIGVI--EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S GVI F P T + I+++N L + + H + +P
Sbjct: 984 SEGVIGANFSPDGQTILTSSFDKTIKLWN----LAGQEIRTIRGHQDWVNEATYSP---- 1035
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G+ + S DG V +D I + + V+SV YS D L AS
Sbjct: 1036 --------DGQTIASASSDGTVRLWD--STSSILHQFSNHTDSVYSVHYSP-DGKLLASA 1084
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+DG + ++D + G+ + A + V+F P G +L +A D +D+
Sbjct: 1085 GNDGKINLYDSK---GEFIRGF--PAHTEPIGSVQFSPDGKTLASAS-GDNTIKLWDLSG 1138
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH---VNNR 277
P+ D H K +T +RF D T+ +A D +KLWN +++RT++GH + N
Sbjct: 1139 --QPINTLDEHEKPITAVRFSPDGQTIASASEDNTVKLWN-RQGQLLRTFEGHKGAITNL 1195
Query: 278 NFV-------------GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGS 324
+F + +W G + + +Q V +V ++ D + + + G
Sbjct: 1196 SFSPDGQTLASASADQTVKLWSLTGQILHTLQGHQNIVRNV-----IFSPDGQTIVSTGG 1250
Query: 325 ER----------------GFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKKKPL 363
+R G +SV D LV+ G D L V+ +PL
Sbjct: 1251 DRTIRFWTRTGQLLKIARGHTASVNSLSFSRDGKLLVSAGEDNTLRVWTASGEPL 1305
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SG DGT+++W+ G+ + +++ + + F P G S +A+ AD +++
Sbjct: 792 SGGGDGTIKLWE---RSGRLLFSIK--RHEREISSIRFSPDGQS-IASASADGTIKLWNL 845
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ P+ +GH VT + F D TL +AG DG ++LWN + + I+T++GH N
Sbjct: 846 KG--QPLHTLEGHEGMVTSVSFSPDGQTLASAGEDGTIRLWN-QEGKQIKTWQGHTGRVN 902
Query: 279 FVGLS 283
V S
Sbjct: 903 TVAFS 907
Score = 47.8 bits (112), Expect = 0.009, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I I F P A+ I+++N+K P+ + H + ++S+
Sbjct: 819 ISSIRFSPDGQSIASASADGTIKLWNLKG----QPLHTLEGHEGM----------VTSVS 864
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD- 163
+ P G+ L S DG + ++ E K I H GR V +V +S + + GSD
Sbjct: 865 FSP--DGQTLASAGEDGTIRLWNQEGK-QIKTWQGHTGR-VNTVAFSPDGQRIASGGSDK 920
Query: 164 ---DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
+ T+++WD GK + T + + V V F P G ++++A D A + +
Sbjct: 921 DNTNNTVRLWD---GNGKLLQTF--TGHQIVVREVNFSPDGQTIISAS-EDHSARLWSIT 974
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
V H + V F D T++T+ D +KLWN+ IRT +GH
Sbjct: 975 GEELQQFV---HSEGVIGANFSPDGQTILTSSFDKTIKLWNLAGQE-IRTIRGH 1024
>gi|355559389|gb|EHH16117.1| hypothetical protein EGK_11356 [Macaca mulatta]
Length = 330
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKLWDVR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLLDDDNP 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
++++RF + ++TA D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PISFVRFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
>gi|328688405|gb|AEB35814.1| COP1 [Helianthus paradoxus]
gi|328688407|gb|AEB35815.1| COP1 [Helianthus paradoxus]
Length = 87
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
+ T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 1 LLTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 58
Query: 154 DPVLGASGSDDGTMQMW 170
+P + SGSDD +++W
Sbjct: 59 EPSMLVSGSDDCKVKIW 75
>gi|328688389|gb|AEB35806.1| COP1 [Helianthus petiolaris]
gi|328688391|gb|AEB35807.1| COP1 [Helianthus petiolaris]
Length = 87
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 2 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQKSVMEYEEHE-KRVWSVDFSRI 59
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 60 EPSMLVSGSDDCKVKIWCTRQESS 83
>gi|328688387|gb|AEB35805.1| COP1 [Helianthus petiolaris]
Length = 95
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQKSVMEYEEHE-KRVWSVDFSRL 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|300865361|ref|ZP_07110172.1| WD-40 repeat-containing serine/threonin protein kinase
[Oscillatoria sp. PCC 6506]
gi|300336664|emb|CBN55322.1| WD-40 repeat-containing serine/threonin protein kinase
[Oscillatoria sp. PCC 6506]
Length = 742
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 11/200 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+GRV+ +G DG V L + H VWSV S + ASGS D T+++
Sbjct: 464 NGRVVVTGSTDGTVRMLHLRTGKLLKTLRGHS-EAVWSVAVSPDGKAI-ASGSADDTIKI 521
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD GK T+ + V V F P G ++ + G DK +D + +
Sbjct: 522 WD--LYTGKLKRTLY--GHTAGVFSVAFSPDGKAIASVG-KDKTVKLWDADTGRE-LETL 575
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V + F + TL T DG +KLWN ++I+T +GH + V +S G
Sbjct: 576 KGHSAGVQSVAFTPNGKTLATGSDDGTIKLWNWRTGKLIQTLRGHSDTVWSVAIS--PDG 633
Query: 289 GLLGCGSETNQVFVYDVRWG 308
L GS N + ++D++ G
Sbjct: 634 QTLASGSWDNTIKLWDLKTG 653
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 14/170 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ + S D V +D + + H V SV ++ L A+GSDDGT+++W
Sbjct: 549 GKAIASVGKDKTVKLWDADTGRELETLKGHSAG-VQSVAFTPNGKTL-ATGSDDGTIKLW 606
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP----- 225
+ R GK + T++ V V P G +L A+G D +D++
Sbjct: 607 NWRT--GKLIQTLR--GHSDTVWSVAISPDGQTL-ASGSWDNTIKLWDLKTGTSRQPRGF 661
Query: 226 -VLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ GH V + F D +TL + G +KLW + ++ T KGH
Sbjct: 662 LLRTLTGHLDKVQSLTFSPDGETLASGDLSGTIKLWQMGSGGLMGTLKGH 711
>gi|328688191|gb|AEB35707.1| COP1 [Lactuca sativa]
gi|328688193|gb|AEB35708.1| COP1 [Lactuca sativa]
gi|328688195|gb|AEB35709.1| COP1 [Lactuca sativa]
gi|328688197|gb|AEB35710.1| COP1 [Lactuca sativa]
gi|328688199|gb|AEB35711.1| COP1 [Lactuca sativa]
gi|328688201|gb|AEB35712.1| COP1 [Lactuca sativa]
gi|328688203|gb|AEB35713.1| COP1 [Lactuca sativa]
gi|328688205|gb|AEB35714.1| COP1 [Lactuca sativa]
gi|328688207|gb|AEB35715.1| COP1 [Lactuca sativa]
gi|328688209|gb|AEB35716.1| COP1 [Lactuca sativa]
gi|328688211|gb|AEB35717.1| COP1 [Lactuca sativa]
gi|328688213|gb|AEB35718.1| COP1 [Lactuca sativa]
gi|328688215|gb|AEB35719.1| COP1 [Lactuca sativa]
gi|328688217|gb|AEB35720.1| COP1 [Lactuca sativa]
gi|328688219|gb|AEB35721.1| COP1 [Lactuca sativa]
gi|328688221|gb|AEB35722.1| COP1 [Lactuca sativa]
gi|328688223|gb|AEB35723.1| COP1 [Lactuca sativa]
gi|328688225|gb|AEB35724.1| COP1 [Lactuca sativa]
gi|328688227|gb|AEB35725.1| COP1 [Lactuca sativa]
gi|328688229|gb|AEB35726.1| COP1 [Lactuca sativa]
gi|328688231|gb|AEB35727.1| COP1 [Lactuca sativa]
gi|328688233|gb|AEB35728.1| COP1 [Lactuca sativa]
gi|328688235|gb|AEB35729.1| COP1 [Lactuca sativa]
gi|328688237|gb|AEB35730.1| COP1 [Lactuca sativa]
gi|328688239|gb|AEB35731.1| COP1 [Lactuca sativa]
gi|328688241|gb|AEB35732.1| COP1 [Lactuca sativa]
gi|328688243|gb|AEB35733.1| COP1 [Lactuca sativa]
gi|328688245|gb|AEB35734.1| COP1 [Lactuca sativa]
gi|328688247|gb|AEB35735.1| COP1 [Lactuca sativa]
gi|328688249|gb|AEB35736.1| COP1 [Lactuca sativa]
gi|328688251|gb|AEB35737.1| COP1 [Lactuca sativa]
gi|328688253|gb|AEB35738.1| COP1 [Lactuca sativa]
gi|328688255|gb|AEB35739.1| COP1 [Lactuca sativa]
gi|328688257|gb|AEB35740.1| COP1 [Lactuca serriola]
gi|328688259|gb|AEB35741.1| COP1 [Lactuca serriola]
gi|328688261|gb|AEB35742.1| COP1 [Lactuca serriola]
gi|328688263|gb|AEB35743.1| COP1 [Lactuca serriola]
gi|328688265|gb|AEB35744.1| COP1 [Lactuca serriola]
gi|328688267|gb|AEB35745.1| COP1 [Lactuca serriola]
gi|328688269|gb|AEB35746.1| COP1 [Lactuca serriola]
gi|328688271|gb|AEB35747.1| COP1 [Lactuca serriola]
gi|328688273|gb|AEB35748.1| COP1 [Lactuca serriola]
gi|328688275|gb|AEB35749.1| COP1 [Lactuca serriola]
gi|328688277|gb|AEB35750.1| COP1 [Lactuca serriola]
gi|328688279|gb|AEB35751.1| COP1 [Lactuca serriola]
gi|328688281|gb|AEB35752.1| COP1 [Lactuca serriola]
gi|328688283|gb|AEB35753.1| COP1 [Lactuca serriola]
gi|328688285|gb|AEB35754.1| COP1 [Lactuca serriola]
gi|328688287|gb|AEB35755.1| COP1 [Lactuca serriola]
gi|328688289|gb|AEB35756.1| COP1 [Lactuca serriola]
gi|328688291|gb|AEB35757.1| COP1 [Lactuca serriola]
gi|328688293|gb|AEB35758.1| COP1 [Lactuca saligna]
gi|328688295|gb|AEB35759.1| COP1 [Lactuca saligna]
gi|328688297|gb|AEB35760.1| COP1 [Lactuca saligna]
gi|328688299|gb|AEB35761.1| COP1 [Lactuca saligna]
gi|328688301|gb|AEB35762.1| COP1 [Lactuca saligna]
gi|328688303|gb|AEB35763.1| COP1 [Lactuca saligna]
gi|328688305|gb|AEB35764.1| COP1 [Lactuca saligna]
gi|328688307|gb|AEB35765.1| COP1 [Lactuca saligna]
gi|328688309|gb|AEB35766.1| COP1 [Lactuca saligna]
gi|328688311|gb|AEB35767.1| COP1 [Lactuca saligna]
gi|328688313|gb|AEB35768.1| COP1 [Lactuca saligna]
gi|328688315|gb|AEB35769.1| COP1 [Lactuca saligna]
gi|328688317|gb|AEB35770.1| COP1 [Lactuca saligna]
gi|328688319|gb|AEB35771.1| COP1 [Lactuca saligna]
gi|328688321|gb|AEB35772.1| COP1 [Lactuca saligna]
gi|328688323|gb|AEB35773.1| COP1 [Lactuca saligna]
gi|328688325|gb|AEB35774.1| COP1 [Lactuca saligna]
gi|328688327|gb|AEB35775.1| COP1 [Lactuca saligna]
gi|328688329|gb|AEB35776.1| COP1 [Lactuca saligna]
gi|328688331|gb|AEB35777.1| COP1 [Lactuca saligna]
gi|328688333|gb|AEB35778.1| COP1 [Lactuca saligna]
gi|328688335|gb|AEB35779.1| COP1 [Lactuca saligna]
gi|328688337|gb|AEB35780.1| COP1 [Lactuca saligna]
gi|328688339|gb|AEB35781.1| COP1 [Lactuca saligna]
gi|328688341|gb|AEB35782.1| COP1 [Lactuca saligna]
gi|328688343|gb|AEB35783.1| COP1 [Lactuca saligna]
gi|328688345|gb|AEB35784.1| COP1 [Lactuca saligna]
gi|328688347|gb|AEB35785.1| COP1 [Lactuca virosa]
gi|328688349|gb|AEB35786.1| COP1 [Lactuca virosa]
gi|328688351|gb|AEB35787.1| COP1 [Lactuca virosa]
gi|328688353|gb|AEB35788.1| COP1 [Lactuca virosa]
gi|328688355|gb|AEB35789.1| COP1 [Lactuca virosa]
gi|328688357|gb|AEB35790.1| COP1 [Lactuca virosa]
gi|328688359|gb|AEB35791.1| COP1 [Lactuca virosa]
gi|328688361|gb|AEB35792.1| COP1 [Lactuca virosa]
gi|328688363|gb|AEB35793.1| COP1 [Lactuca virosa]
gi|328688365|gb|AEB35794.1| COP1 [Lactuca virosa]
gi|328688367|gb|AEB35795.1| COP1 [Lactuca virosa]
gi|328688369|gb|AEB35796.1| COP1 [Lactuca virosa]
gi|328688371|gb|AEB35797.1| COP1 [Lactuca sativa]
Length = 90
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G+V +D+ + + E +EH +RVWSVD+SK D
Sbjct: 8 TRSKLSCLSWNKHTKNHI-ASSDYEGIVTIWDVNTRQSVMEYEEHE-KRVWSVDFSKMDS 65
Query: 156 VLGASGSDDGTMQMW 170
+ SGSDD +++W
Sbjct: 66 SMLVSGSDDCKVKIW 80
>gi|341895688|gb|EGT51623.1| hypothetical protein CAEBREN_05110 [Caenorhabditis brenneri]
Length = 492
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 123/322 (38%), Gaps = 55/322 (17%)
Query: 46 GVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKW 105
G+ D + TGGI + + VL D+ + +V + K++++
Sbjct: 213 GITSLDIKGTFSLTGGIDKTV-------VLFDY------EKEQVVQTFKGHNKKINAVVL 259
Query: 106 KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK-GDPVLGASG--- 161
P T + S D + ++ DE + V V + D L ASG
Sbjct: 260 HPDTKTAISASSD-----------SHIRVWSSDEATAKAVIDVHQAPVTDISLNASGDYI 308
Query: 162 ---SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SDD D R C V+P A+ AV C+EFHP G + G AD +D
Sbjct: 309 LSASDDSYWAFSDIRSGKSLCKVAVEPGANI-AVHCIEFHPDGL-IFGTGAADSVVKIWD 366
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVN-- 275
++ F GH +V I F + L T DG +KLW D R ++ K H N
Sbjct: 367 LKNQTIAA-AFPGHTASVRSIAFSENGYYLATGSEDGEVKLW---DLRKLKNLKTHANPE 422
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE-PVTAAGSERGFVSSVCW 334
+ LS G LG G + QV + W E V + D PVT
Sbjct: 423 KQPINSLSFDITGTFLGIGGQKVQVL-HVKTWNEVVALSDHSGPVTGV------------ 469
Query: 335 RRVGEDECTLVAGGSDGLLHVF 356
+ GE+ +LV D L VF
Sbjct: 470 -KFGENARSLVTCSLDKSLRVF 490
>gi|328688423|gb|AEB35823.1| COP1 [Helianthus exilis]
Length = 95
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|242759868|ref|XP_002339873.1| Pfs, NACHT and WD domain protein [Talaromyces stipitatus ATCC
10500]
gi|218723069|gb|EED22486.1| Pfs, NACHT and WD domain protein [Talaromyces stipitatus ATCC
10500]
Length = 1341
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 117/283 (41%), Gaps = 42/283 (14%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + A+G I++++ + V+H + HS + +P +
Sbjct: 729 FSPDGKLIASGSEDETIKLWDAATGEVNHTLEG---HSDIISSVAFSPDR---------- 775
Query: 110 SGRVLGSGDYDGVVMEYDL---EKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
+ + SG D + D E K + D+ VWS+ +S D L ASGS D T
Sbjct: 776 --KFIASGSRDKTIKLRDAATGEVKQTLEGHDD----TVWSIAFSP-DGKLIASGSRDKT 828
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD G+ T++ V + F P G L+A+G DK +DV +
Sbjct: 829 IKLWDAAT--GEVKHTLK--GHDDTVWSIAFSPDGK-LIASGSRDKTIKLWDV-ATGEVK 882
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+GH TV I F L+ +G+ D +KLW+ V T KGH + + ++
Sbjct: 883 QTLEGHDDTVRSIAFSPDGKLIASGSHDKTIKLWDAATGEVKHTLKGH--DDMILSVTFS 940
Query: 286 RHGGLLGCGSETNQVFVYDVRWG----------EPVWVHDFEP 318
G + GSE + ++DV G + VW F P
Sbjct: 941 PDGNFIASGSEDRSIKLWDVATGVDKHTLEGHDDTVWSIAFSP 983
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 26/268 (9%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D++ I F P + A+G + I++++ + V H + K D I S
Sbjct: 890 DTVRSIAFSPDGKLIASGSHDKTIKLWDAATGEVKHTL-------KGHDDMIL------S 936
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P G + SG D + +D+ V + H VWS+ +S D L ASG
Sbjct: 937 VTFSP--DGNFIASGSEDRSIKLWDVATGVDKHTLEGHDD-TVWSIAFSP-DGKLIASGP 992
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
T+++WD G+ T++ + V F P G L+A+G D+ +D K
Sbjct: 993 GGKTIKLWDAAT--GEVKHTLK--GHDDMILSVTFSPDG-KLIASGSEDRSIKLWDAAKG 1047
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ +GH + + F L+ +G+ D +KLW+ V T +GH + + V
Sbjct: 1048 -EVKHTLEGHSDMILSVAFSPDGKLIASGSEDETIKLWDAATGEVNHTLEGHSDMISLVA 1106
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G + GS + ++DV GE
Sbjct: 1107 FS--PDGKFIASGSRDKTIKLWDVATGE 1132
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 26/268 (9%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D++ I F P + A+G + I++++ + V H + K D I S
Sbjct: 974 DTVWSIAFSPDGKLIASGPGGKTIKLWDAATGEVKHTL-------KGHDDMIL------S 1020
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P G+++ SG D + +D K + H + SV +S D L ASGS
Sbjct: 1021 VTFSP--DGKLIASGSEDRSIKLWDAAKGEVKHTLEGHSDM-ILSVAFSP-DGKLIASGS 1076
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
+D T+++WD G+ T++ + V F P G +A+G DK +DV
Sbjct: 1077 EDETIKLWDAAT--GEVNHTLE--GHSDMISLVAFSPDG-KFIASGSRDKTIKLWDV-AT 1130
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ + + TV + F L+ +G+ D +KLW+V T +GH + +
Sbjct: 1131 GEVKQTLESYNYTVLSVTFSPDGKLIASGSEDETIKLWDVATGVDKHTLEGHDDTVWSIA 1190
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G L+ GS + ++D GE
Sbjct: 1191 FS--PDGKLIASGSRDKTIKLWDAATGE 1216
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 94/231 (40%), Gaps = 24/231 (10%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D I + F P + A+G R I++++ V H + HS + +P
Sbjct: 1016 DMILSVTFSPDGKLIASGSEDRSIKLWDAAKGEVKHTLEG---HSDMILSVAFSP----- 1067
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
G+++ SG D + +D G + S+ D ASGS
Sbjct: 1068 -------DGKLIASGSEDETIKLWD--AATGEVNHTLEGHSDMISLVAFSPDGKFIASGS 1118
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+++WD G+ T++ + V V F P G L+A+G D+ +DV
Sbjct: 1119 RDKTIKLWDVAT--GEVKQTLE--SYNYTVLSVTFSPDGK-LIASGSEDETIKLWDVATG 1173
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKG 272
VD +GH TV I F L+ +G+ D +KLW+ V T KG
Sbjct: 1174 VDK-HTLEGHDDTVWSIAFSPDGKLIASGSRDKTIKLWDAATGEVKHTLKG 1223
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 12/200 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+++ SG D + +D ++ G V S +S D L ASGS+D T+++W
Sbjct: 692 GKLIASGSRDKTIKLWD--ATTGEVKQTLKGHDYVLSAAFSP-DGKLIASGSEDETIKLW 748
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+ T++ + V F P +A+G DK D + +
Sbjct: 749 DAAT--GEVNHTLE--GHSDIISSVAFSP-DRKFIASGSRDKTIKLRDA-ATGEVKQTLE 802
Query: 231 GHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH TV I F L+ +G+ D +KLW+ V T KGH + + S G
Sbjct: 803 GHDDTVWSIAFSPDGKLIASGSRDKTIKLWDAATGEVKHTLKGHDDTVWSIAFS--PDGK 860
Query: 290 LLGCGSETNQVFVYDVRWGE 309
L+ GS + ++DV GE
Sbjct: 861 LIASGSRDKTIKLWDVATGE 880
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 22/177 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD I + F P + A+G I++++ + V+H + HS + +P
Sbjct: 1057 SDMILSVAFSPDGKLIASGSEDETIKLWDAATGEVNHTLEG---HSDMISLVAFSP---- 1109
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G+ + SG D + +D+ + + E V SV +S D L ASG
Sbjct: 1110 --------DGKFIASGSRDKTIKLWDVATG-EVKQTLESYNYTVLSVTFSP-DGKLIASG 1159
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
S+D T+++WD V V + F P G L+A+G DK +D
Sbjct: 1160 SEDETIKLWDV----ATGVDKHTLEGHDDTVWSIAFSPDG-KLIASGSRDKTIKLWD 1211
>gi|168042307|ref|XP_001773630.1| WD40 repeat protein, COMPASS complex protein [Physcomitrella patens
subsp. patens]
gi|162675018|gb|EDQ61518.1| WD40 repeat protein, COMPASS complex protein [Physcomitrella patens
subsp. patens]
Length = 309
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V+ V+++ V+ SGS D T+++WD + GKC+ T+ A V V+F+ GS L
Sbjct: 108 VFCVNFNPQSSVI-VSGSFDETVRLWDVKT--GKCLKTLL--AHSDPVTAVDFNRDGS-L 161
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
+ D +D + D TV++++F + AGT D L+LWN
Sbjct: 162 IVTSSYDGLCKIWDNTSGDCVKTLIDDKNPTVSFVKFSPNGKFILAGTLDNNLRLWNYAT 221
Query: 264 SRVIRTYKGHVNNRN--FVGLSVWRHGGLLGCGSETNQVFVYDVR 306
S+ +RTY GH N++ F SV +G + GSE N V+++D++
Sbjct: 222 SKCLRTYTGHKNDKFCVFATFSV-TNGKYIVSGSEDNCVYLWDLQ 265
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
V+ SG +D V +D++ + H V +VD+++ D L + S DG ++WD
Sbjct: 119 VIVSGSFDETVRLWDVKTGKCLKTLLAHSDP-VTAVDFNR-DGSLIVTSSYDGLCKIWDN 176
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRKMVDPVLVFD 230
G CV T+ + + V V+F P G + AG D + + Y K + +
Sbjct: 177 T--SGDCVKTLIDDKNPT-VSFVKFSPNGK-FILAGTLDNNLRLWNYATSKCL---RTYT 229
Query: 231 GHR--KTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GH+ K + F + +V+ D C+ LW++ +I+T +GH
Sbjct: 230 GHKNDKFCVFATFSVTNGKYIVSGSEDNCVYLWDLQAQNIIQTLEGH 276
>gi|296226113|ref|XP_002758783.1| PREDICTED: WD repeat-containing protein 5B [Callithrix jacchus]
Length = 330
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 63/261 (24%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKLWDAR--SGKCLKTLEGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 151
Query: 217 YDVRK---------MVDPV----------------------------------LVFDGHR 233
++V+ DPV LV DG+
Sbjct: 152 WEVKTGNCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDGN- 210
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGL 290
V++++F + ++TA D LKLW+ R ++TY GH N + F SV G
Sbjct: 211 PPVSFVKFSPNGKYILTATLDNTLKLWDYTRGRCLKTYTGHKNEKYCIFANFSV-TGGKW 269
Query: 291 LGCGSETNQVFVYDVRWGEPV 311
+ GSE N V++++++ E V
Sbjct: 270 IVSGSEDNLVYIWNLQTKEIV 290
>gi|428212107|ref|YP_007085251.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
gi|428000488|gb|AFY81331.1| WD40 repeat-containing protein [Oscillatoria acuminata PCC 6304]
Length = 1727
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 136/302 (45%), Gaps = 25/302 (8%)
Query: 28 RTT--VSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYN-----IKSVLVDHPV 80
RTT V++ +P+ D + + F P A+ ++I+N + LVD +
Sbjct: 1399 RTTEAVTTLQAPDGH-GDRVFGVSFSPDGRAIASVSQDCTVKIWNASNGTLLKTLVDPNL 1457
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
+ C ++ S+ + P G+++ SG D V + ++ + + E
Sbjct: 1458 TSDPSKHSDCPVESSHSDRIYSVSFSP--DGQLIASGSRDKTVKIWRIDGT--LLKVLEG 1513
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
RV SV +S D L ASGSDD +++W + + +S P +S V V F P
Sbjct: 1514 HSERVNSVAFSP-DGRLIASGSDDKMVKLWSKEGELLQTLSGRYPH--QSYVTSVTFSPD 1570
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
G VA+ D +++ ++ L+ G+ +V +RF D LV+A DG +KLW
Sbjct: 1571 GQR-VASASWDNTVKIWNLDGTLEKTLL-QGYSDSVESVRFSPDGRLLVSASWDGTVKLW 1628
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP-----VWVH 314
++ D +++T +GH + V S G ++ + N V ++++ + W+H
Sbjct: 1629 SLKDGTLLKTLQGHTSGVLDVEFSP--DGEIIASAGDDNTVILWNLDLDDLTRRACTWLH 1686
Query: 315 DF 316
D+
Sbjct: 1687 DY 1688
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 137 RDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVST----VQPSASRSAV 192
R E G VWSV +S D L ASGS+D + +W+ K + V + V
Sbjct: 1061 RLEEHGAEVWSVAFSP-DGQLLASGSNDTQVLLWNRNGSLHKKLVDYSLDVTGVSHADEV 1119
Query: 193 CCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAG 251
V F P G +A+ D+ + + L +GH ++ F D L TA
Sbjct: 1120 TSVAFSPDGD-FIASTSRDRTVKLWKRDGSLYKTL--NGHTNSIYSASFSPDSQFLATAS 1176
Query: 252 TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
D +KLW V+D ++RT+ GH ++ N+V S
Sbjct: 1177 HDQTVKLWRVSDGSLVRTFNGHTDSVNWVMFS 1208
>gi|427416791|ref|ZP_18906974.1| WD40 repeat-containing protein [Leptolyngbya sp. PCC 7375]
gi|425759504|gb|EKV00357.1| WD40 repeat-containing protein [Leptolyngbya sp. PCC 7375]
Length = 394
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 29/235 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + + PS + A+G IRI+N+ + + H +V D K
Sbjct: 147 SDVVEDVVLSPSGKLLASGSWDNDIRIWNLMTKQLFHDLVGHTDDVKSLAI--------- 197
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDL--EKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
G +L SG +D V +D+ + + FE HG + +V S +
Sbjct: 198 ------SEDGSLLVSGSFDKTVRIWDIWSGELLHTFEH-PHG---ITAVAISPNGKTI-V 246
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SG G + +WD + + + + V + F P S++V +G D+ A A+D+
Sbjct: 247 SGDRRGMLHVWDLKTK----MKLLTLHGHKRTVWDLAFSP-DSTMVVSGSQDRTAIAWDL 301
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+K +PV +F GH + V + F D T+ + D +KLW+V + + ++T +GH
Sbjct: 302 QKF-EPVCMFVGHGRAVYSVAFSPDGRTVASGSYDHTVKLWDVKNHQRVQTLRGH 355
>gi|328688385|gb|AEB35804.1| COP1 [Helianthus petiolaris]
Length = 95
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQKSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|328688555|gb|AEB35889.1| COP1 [Helianthus annuus]
gi|328688557|gb|AEB35890.1| COP1 [Helianthus annuus]
Length = 83
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 1 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 58
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 59 EPSMLVSGSDDCKVKIWCTR 78
>gi|357508793|ref|XP_003624685.1| U5 snRNP-specific protein-like factor [Medicago truncatula]
gi|355499700|gb|AES80903.1| U5 snRNP-specific protein-like factor [Medicago truncatula]
Length = 345
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 32/290 (11%)
Query: 26 NLRTTVSSSSSPNAAVS---DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
N + SS SP ++ ++ ++F+P+ SV A+G ++I ++N+
Sbjct: 36 NGKQRTSSLESPIMLLTGHQSAVYTMKFNPTGSVVASGSHDKEIFLWNV----------- 84
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
H ++ + K + L + G + S D + +D E I + EH
Sbjct: 85 ---HGDCKNFMVLKGHKNAVLDLHWTSDGTQIISASPDKTLRLWDTETGKQIKKMVEHLS 141
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
V S ++ P L SGSDDGT ++WD R G ++Q + + V F S
Sbjct: 142 Y-VNSCCPTRRGPPLVVSGSDDGTAKLWDMRQRG-----SIQTFPDKYQITAVSFSD-AS 194
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
+ G D +D+RK + + GH+ +T ++ D L+T G D L +W++
Sbjct: 195 DKIYTGGIDNDVKIWDLRKG-EVTMTLQGHQDMITSMQLSPDGSYLLTNGMDCKLCIWDM 253
Query: 262 N----DSRVIRTYKGHVNN--RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+R ++ +GH +N +N + G + GS V+++D
Sbjct: 254 RPYAPQNRCVKILEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT 303
>gi|328688715|gb|AEB35969.1| COP1 [Helianthus annuus]
Length = 96
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|389738370|gb|EIM79569.1| WD40 repeat-like protein [Stereum hirsutum FP-91666 SS1]
Length = 1243
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 123/292 (42%), Gaps = 28/292 (9%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYN-IKSVLVDHPVV 81
WD T + S P + S+ ++F P S+ A+G R +RI++ + P+
Sbjct: 975 WDIQ---TGTESLRPLEGHTRSVSSVQFSPDGSLIASGSFDRTVRIWDAVTRKQKGEPLR 1031
Query: 82 AVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG 141
D ++S+ + P G+ L SG D V ++LE + F+ E
Sbjct: 1032 GHTD-------------DINSVGFSP--DGKHLVSGSDDHTVCVWNLETRSEAFKPLEGH 1076
Query: 142 GRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG 201
VWSV YS D SGS D T+++WD + GK V +R+ V V F P G
Sbjct: 1077 TSYVWSVQYSP-DGRYIVSGSGDRTVRLWD--ANTGKAVGEPFRGHNRT-VTSVAFSPDG 1132
Query: 202 SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN 260
+ +V +G DK +D + + GH V + + D +V+ D +++W+
Sbjct: 1133 TRIV-SGSLDKTIRIWDTKTVKAVGEPLRGHTNWVWSVAYSPDGKRIVSGSRDETVRVWD 1191
Query: 261 VNDSR-VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ V +GH V S+ G L+ S + ++D GE +
Sbjct: 1192 AETGKEVFELLRGHTEKMWSVAWSL--DGKLIASASYDKTIRLWDANTGESI 1241
>gi|328688671|gb|AEB35947.1| COP1 [Helianthus annuus]
gi|328688673|gb|AEB35948.1| COP1 [Helianthus annuus]
Length = 85
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|388855752|emb|CCF50740.1| uncharacterized protein [Ustilago hordei]
Length = 870
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 111/252 (44%), Gaps = 24/252 (9%)
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGR-RVWSVDYSK-GDPVLGASGSDDG 165
G GR L SG D V ++ E G R RVW VD ++ G V ASG D
Sbjct: 550 GEEGRRLVSGSSDNTVRLWN--SNTGRCEGVLEGHRSRVWDVDSTRTGGHVASASG--DS 605
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++WD + +C +T++ A V FHP +V+AG DK YDV +
Sbjct: 606 TVKVWD--VESAQCRTTLR--AGVGDVYSCRFHPDERHIVSAGY-DKLVRMYDV-ETGSI 659
Query: 226 VLVFDGHRKTVTYIRFLDVDTL-VTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
V F GH+ V+ F + L VTA D ++ W+V IRT GH+ + +
Sbjct: 660 VKTFTGHQLGVSSAIFNPLGNLIVTASKDTTIRFWDVVSGLCIRTITGHLG--EVTSVEI 717
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTL 344
G LL S+ N ++D+R P+ T+ + F+ R L
Sbjct: 718 NETGTLLLSSSKDNSNRLWDLRMLRPLKRFKGHQNTS----KNFI-----RSSFAHTSLL 768
Query: 345 VAGGSDGLLHVF 356
V G DGL++++
Sbjct: 769 VGGSEDGLIYMW 780
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 19/169 (11%)
Query: 112 RVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKGDPV--LGASGSDDGTM 167
R + S YD +V YD+E V F + G V + +P+ L + S D T+
Sbjct: 638 RHIVSAGYDKLVRMYDVETGSIVKTFTGHQLG------VSSAIFNPLGNLIVTASKDTTI 691
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+ WD G C+ T+ + V VE + G+ L+++ D +D+R M+ P+
Sbjct: 692 RFWD--VVSGLCIRTI--TGHLGEVTSVEINETGTLLLSS-SKDNSNRLWDLR-MLRPLK 745
Query: 228 VFDGHRKTV-TYIR--FLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
F GH+ T +IR F LV DG + +W+ S V++T +GH
Sbjct: 746 RFKGHQNTSKNFIRSSFAHTSLLVGGSEDGLIYMWDQESSEVLQTLEGH 794
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 25/133 (18%)
Query: 231 GHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW--- 285
GHRK V +RF+ + LV+ +D ++LWN N R +GH + VW
Sbjct: 538 GHRKNVKSVRFVGEEGRRLVSGSSDNTVRLWNSNTGRCEGVLEGHRSR-------VWDVD 590
Query: 286 --RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECT 343
R GG + S + V V+DV E + R V V R DE
Sbjct: 591 STRTGGHVASASGDSTVKVWDV-----------ESAQCRTTLRAGVGDVYSCRFHPDERH 639
Query: 344 LVAGGSDGLLHVF 356
+V+ G D L+ ++
Sbjct: 640 IVSAGYDKLVRMY 652
>gi|328855965|gb|EGG05088.1| hypothetical protein MELLADRAFT_88159 [Melampsora larici-populina
98AG31]
Length = 804
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 107 PGTSGRVLGSGDYDGVVM--EYDLEKKVPIFERDEHGGRR-VWSVDY-SKGDPVLGASGS 162
P R L S D + DL K + ++ G R VW V++ KG + AS S
Sbjct: 530 PSAPPRHLISSSQDSTIRLWSLDLFKNLVVYR----GHREPVWDVEWGPKG--IYFASAS 583
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T ++W C+ V S V C+ FHP S +A G +D+ +DV++
Sbjct: 584 RDRTARLWC--CERVNAVRMF--VGHLSDVDCITFHP-NSLYMATGSSDRTCRLWDVQRG 638
Query: 223 VDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ V VF GH V ++ D L +AG D +K+W++ SR+++T +GH +
Sbjct: 639 -NCVRVFHGHEGAVNCVKISPDGKLLASAGEDQSIKIWDIGSSRLMKTMRGH--QSSIYS 695
Query: 282 LSVWRHGGLLGCGSETNQVFVYDV 305
L L+ GS V ++DV
Sbjct: 696 LDFNAESNLIATGSADESVRIWDV 719
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 13/119 (10%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A+GS D T ++WD G CV AV CV+ P G L +AG D+ +D
Sbjct: 622 ATGSSDRTCRLWD--VQRGNCVRVFH--GHEGAVNCVKISPDGKLLASAG-EDQSIKIWD 676
Query: 219 V---RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGH 273
+ R M GH+ ++ + F L+ G+ D +++W+V S + K H
Sbjct: 677 IGSSRLMK----TMRGHQSSIYSLDFNAESNLIATGSADESVRIWDVERSSTNQPPKRH 731
>gi|328688495|gb|AEB35859.1| COP1 [Helianthus annuus]
gi|328688507|gb|AEB35865.1| COP1 [Helianthus annuus]
gi|328688509|gb|AEB35866.1| COP1 [Helianthus annuus]
gi|328688559|gb|AEB35891.1| COP1 [Helianthus annuus]
gi|328688561|gb|AEB35892.1| COP1 [Helianthus annuus]
gi|328688679|gb|AEB35951.1| COP1 [Helianthus annuus]
gi|328688681|gb|AEB35952.1| COP1 [Helianthus annuus]
Length = 85
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 2 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 59
Query: 156 VLGASGSDDGTMQMWDPR 173
+ SGSDD +++W R
Sbjct: 60 SMLVSGSDDCKVKIWCTR 77
>gi|190896150|gb|ACE96588.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896152|gb|ACE96589.1| U5 snRNP-specific protein-like factor [Populus tremula]
Length = 215
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + S D V +D+E I + EH V S S+ P L SGSDDGT ++W
Sbjct: 23 GSQIISASPDKTVRAWDVETGKQIKKMAEHSSF-VNSCCPSRRGPPLVVSGSDDGTSKLW 81
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R G +Q + + V F S + G D +D+RK + + +
Sbjct: 82 DLRHKGA-----IQTFPDKYQITAVSFSD-ASDKIFTGGIDNDVKVWDIRKG-EVTMTLE 134
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVGLS 283
GH+ +T ++ D L+T G D L +W++ +R ++ ++GH +N +N + S
Sbjct: 135 GHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCS 194
Query: 284 VWRHGGLLGCGSETNQVFVYD 304
G + GS V+++D
Sbjct: 195 WSPDGSKVTAGSADRMVYIWD 215
>gi|444705398|gb|ELW46827.1| E3 ubiquitin-protein ligase RFWD2 [Tupaia chinensis]
Length = 297
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 23/136 (16%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S +
Sbjct: 166 VSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKISCIS 219
Query: 105 WKPGTSGRVLGSGDYDGVVMEYD---------------LEKKVPIFERDEHGGRRVWSVD 149
W +L S DY+G V+ +D E + F EH +R WSVD
Sbjct: 220 WS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQIGILFESTLSFFYIQEHE-KRCWSVD 277
Query: 150 YSKGDPVLGASGSDDG 165
++ DP L ASGSDD
Sbjct: 278 FNLMDPKLLASGSDDA 293
>gi|345496135|ref|XP_003427661.1| PREDICTED: katanin p80 WD40-containing subunit B1-like isoform 1
[Nasonia vitripennis]
Length = 889
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRVL +G D V + + K+ I H + V + + + ++ A GS G +++
Sbjct: 30 SGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTP-IECVRFGQTEDLVCA-GSQTGALKI 87
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K T+ + + + C++FHP+G L+A+G D +D+R+ + +
Sbjct: 88 WD--LEHAKLSRTL--TGHKLGIRCMDFHPYGE-LLASGSMDTAIKLWDIRRK-GCIFTY 141
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V ++F D + +AG +G +KLW++ R +R + H V H
Sbjct: 142 KGHDRMVNNLKFSPDGQWIASAGEEGMVKLWDLRAGRQLREFSDHKGPATSVEFHP--HE 199
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V +D+
Sbjct: 200 FLLASGSTDRVVHFWDL 216
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 26/199 (13%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+G DD + +W C+ ++ S + + CV F LV AG +D+
Sbjct: 36 TGGDDKKVNLW--AVGKQNCIMSL--SGHTTPIECVRFGQ-TEDLVCAGSQTGALKIWDL 90
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGH---VN 275
+ GH+ + + F L+ +G+ D +KLW++ I TYKGH VN
Sbjct: 91 -EHAKLSRTLTGHKLGIRCMDFHPYGELLASGSMDTAIKLWDIRRKGCIFTYKGHDRMVN 149
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
N F W + E V ++D+R G + +F +G +SV +
Sbjct: 150 NLKFSPDGQW-----IASAGEEGMVKLWDLRAGR--QLREF------SDHKGPATSVEFH 196
Query: 336 RVGEDECTLVAGGSDGLLH 354
E L +G +D ++H
Sbjct: 197 ---PHEFLLASGSTDRVVH 212
>gi|332711539|ref|ZP_08431470.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332349517|gb|EGJ29126.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 1620
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 77/349 (22%), Positives = 136/349 (38%), Gaps = 46/349 (13%)
Query: 4 FHDHQQPQAETTNERARCEW--DFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGG 61
F + Q A ++++ W D LR T+ A D+I + F P+ A+G
Sbjct: 1181 FSPNSQTIASASDDQTVKLWNRDGTLRKTL-------AGHDDAINSVSFSPNGEWIASGT 1233
Query: 62 IARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDG 121
KI+++ P+ + H + TP G++L S D
Sbjct: 1234 SDGKIKLWTGNGT----PISTLPGHKDTVNQVSFTP------------DGKMLASASLDF 1277
Query: 122 VVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVS 181
V + L++ +P + + +S ++ + DD T+++W+P+ + +
Sbjct: 1278 TVKLWSLDQILPKVFQPTSYTVYGYGASFSPDGEIIASGSRDDNTVKLWNPKEE----IR 1333
Query: 182 TVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
+ + V V+F P G L+A DK ++ + + L GH V + F
Sbjct: 1334 KLTLQGHQGFVNGVDFSPDG-QLIATASNDKTVKLWNRQGKLLHTLA--GHSDRVYSVSF 1390
Query: 242 L-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
D + +A D +KLW + +++RT GH + N V S G L+ S V
Sbjct: 1391 SPDSQIIASASEDSTVKLW-TREGKLLRTLAGHTDAINRVSFS--SDGQLIASASNDKTV 1447
Query: 301 FVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
+W D +T +R +SSV + G+ AGGS
Sbjct: 1448 ---------KLWKQDGTLITTLPGDRK-LSSVSFSPDGKRIVAGAAGGS 1486
>gi|328688471|gb|AEB35847.1| COP1 [Helianthus argophyllus]
gi|328688473|gb|AEB35848.1| COP1 [Helianthus argophyllus]
Length = 86
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 1 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 58
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 59 EPSMLVSGSDDCKVKIWCTR 78
>gi|345496137|ref|XP_003427662.1| PREDICTED: katanin p80 WD40-containing subunit B1-like isoform 2
[Nasonia vitripennis]
Length = 870
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRVL +G D V + + K+ I H + V + + + ++ A GS G +++
Sbjct: 30 SGRVLVTGGDDKKVNLWAVGKQNCIMSLSGHTTP-IECVRFGQTEDLVCA-GSQTGALKI 87
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K T+ + + + C++FHP+G L+A+G D +D+R+ + +
Sbjct: 88 WD--LEHAKLSRTL--TGHKLGIRCMDFHPYGE-LLASGSMDTAIKLWDIRRK-GCIFTY 141
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V ++F D + +AG +G +KLW++ R +R + H V H
Sbjct: 142 KGHDRMVNNLKFSPDGQWIASAGEEGMVKLWDLRAGRQLREFSDHKGPATSVEFHP--HE 199
Query: 289 GLLGCGSETNQVFVYDV 305
LL GS V +D+
Sbjct: 200 FLLASGSTDRVVHFWDL 216
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 26/199 (13%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+G DD + +W C+ ++ S + + CV F LV AG +D+
Sbjct: 36 TGGDDKKVNLW--AVGKQNCIMSL--SGHTTPIECVRFGQ-TEDLVCAGSQTGALKIWDL 90
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGH---VN 275
+ GH+ + + F L+ +G+ D +KLW++ I TYKGH VN
Sbjct: 91 -EHAKLSRTLTGHKLGIRCMDFHPYGELLASGSMDTAIKLWDIRRKGCIFTYKGHDRMVN 149
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWR 335
N F W + E V ++D+R G + +F +G +SV +
Sbjct: 150 NLKFSPDGQW-----IASAGEEGMVKLWDLRAGR--QLREF------SDHKGPATSVEFH 196
Query: 336 RVGEDECTLVAGGSDGLLH 354
E L +G +D ++H
Sbjct: 197 ---PHEFLLASGSTDRVVH 212
>gi|328688475|gb|AEB35849.1| COP1 [Helianthus argophyllus]
Length = 93
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 4 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 61
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 62 EPSMLVSGSDDCKVKIWCTR 81
>gi|190896128|gb|ACE96577.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896132|gb|ACE96579.1| U5 snRNP-specific protein-like factor [Populus tremula]
Length = 215
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + S D V +D+E I + EH V S S+ P L SGSDDGT ++W
Sbjct: 23 GSQIISASPDKTVRAWDVETGKQIKKMAEHSSF-VNSCCPSRRGPPLVVSGSDDGTSKLW 81
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R G +Q + + V F S + G D +D+RK + + +
Sbjct: 82 DLRQKGA-----IQTFPDKYQITAVSFSD-ASDKIFTGGIDNDVKVWDIRKG-EVTMTLE 134
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVGLS 283
GH+ +T ++ D L+T G D L +W++ +R ++ ++GH +N +N + S
Sbjct: 135 GHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCS 194
Query: 284 VWRHGGLLGCGSETNQVFVYD 304
G + GS V+++D
Sbjct: 195 WSPDGSKVTAGSADRMVYIWD 215
>gi|428203549|ref|YP_007082138.1| WD40 repeat-containing protein [Pleurocapsa sp. PCC 7327]
gi|427980981|gb|AFY78581.1| WD40 repeat-containing protein [Pleurocapsa sp. PCC 7327]
Length = 1331
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 91/390 (23%), Positives = 153/390 (39%), Gaps = 86/390 (22%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD +T P D + I FDP + A+G + +R++++ + P+
Sbjct: 775 WDLQGKTI----GRPFRGHEDYVIAIAFDPEGKLIASGSSDKVVRLWDLSGNPIGQPLRG 830
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
H+ + + SL + P G+ + S D V +DL R G
Sbjct: 831 ---HT----------SSVRSLAFSP--DGQTVTSASTDKSVRLWDLRGNA--LHRPIQGH 873
Query: 143 R-RVWSVDYS------KGDPVLGASGSDDGTMQMWDP---------RCDGGKCVSTV--- 183
VWSV +S +G + A+G DGT+++WD R G S
Sbjct: 874 EVSVWSVAFSPTPVDKEGKEEIFATGGGDGTVRLWDLSGNPIGQPLRGHAGDVTSVAFSP 933
Query: 184 --QPSASRS------------------------AVCCVEFHPFGSSLVAAGCADKKAYAY 217
Q AS S V V F P G +A+G DK +
Sbjct: 934 DGQTIASGSWDRTIRLWNLASNPIARPFQGHENDVTSVAFSPDGEK-IASGSWDKTIRLW 992
Query: 218 DVRK--MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
D++ + P F GH VT + F D + + + D ++LW++ + + R ++GH
Sbjct: 993 DLKGNLIARP---FRGHEGDVTSVVFSPDGEKIASGSWDKTIRLWDLKGNLIARPFQGHR 1049
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCW 334
N V S G ++ G + ++D+ G P+ EP S +V+SV +
Sbjct: 1050 ERVNSVAFS--PDGQVIVSGGGDGTIRLWDLS-GNPIG----EPFRGHES---YVTSVAF 1099
Query: 335 RRVGEDECTLVAGGSDGLLHVFVGKKKPLS 364
G+ T+V+GG DG + ++ P++
Sbjct: 1100 NPDGQ---TIVSGGGDGTIRLWDLSGNPIA 1126
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 127/276 (46%), Gaps = 36/276 (13%)
Query: 6 DHQQPQAETTNERARCEWDFN---LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGI 62
D Q + +T++ R WD L + +V+ S ++ + + +FATGG
Sbjct: 843 DGQTVTSASTDKSVRL-WDLRGNALHRPIQGHEVSVWSVAFSPTPVDKEGKEEIFATGGG 901
Query: 63 ARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGV 122
+R++++ + P+ H+ ++S+ + P G+ + SG +D
Sbjct: 902 DGTVRLWDLSGNPIGQPLRG---HA----------GDVTSVAFSP--DGQTIASGSWDRT 946
Query: 123 VMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVS 181
+ ++L PI + V SV +S G+ + ASGS D T+++WD + G ++
Sbjct: 947 IRLWNLASN-PIARPFQGHENDVTSVAFSPDGEKI--ASGSWDKTIRLWDLK---GNLIA 1000
Query: 182 TVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK--MVDPVLVFDGHRKTVTY 238
+P V V F P G +A+G DK +D++ + P F GHR+ V
Sbjct: 1001 --RPFRGHEGDVTSVVFSPDGEK-IASGSWDKTIRLWDLKGNLIARP---FQGHRERVNS 1054
Query: 239 IRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ F D +V+ G DG ++LW+++ + + ++GH
Sbjct: 1055 VAFSPDGQVIVSGGGDGTIRLWDLSGNPIGEPFRGH 1090
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 28/258 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G R IR++N+ S + P H ++S+ + P
Sbjct: 929 VAFSPDGQTIASGSWDRTIRLWNLASNPIARPFQG---HEN----------DVTSVAFSP 975
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G + SG +D + +DL+ + H G V G+ + ASGS D T+
Sbjct: 976 --DGEKIASGSWDKTIRLWDLKGNLIARPFRGHEGDVTSVVFSPDGEKI--ASGSWDKTI 1031
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV- 226
++WD + G Q R V V F P G +V+ G D +D+ +P+
Sbjct: 1032 RLWDLK--GNLIARPFQ--GHRERVNSVAFSPDGQVIVSGG-GDGTIRLWDLSG--NPIG 1084
Query: 227 LVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
F GH VT + F D T+V+ G DG ++LW+++ + + + ++ + + V S
Sbjct: 1085 EPFRGHESYVTSVAFNPDGQTIVSGGGDGTIRLWDLSGNPIAQPFEIYKSEATSVAFS-- 1142
Query: 286 RHGGLLGCGSETNQVFVY 303
+G +L S +V+++
Sbjct: 1143 SNGQILVGSSLNGKVYLW 1160
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+++ SG +D + +D + H G V SV +S + SGS DGT+++W
Sbjct: 592 GQIIVSGSWDKTLRLWDRQGNAIGQPFRGHEGD-VTSVAFSPDGQTI-VSGSGDGTVRLW 649
Query: 171 DPRCDGGKCVSTVQPS-ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV-LV 228
+ + + +P + V V F P G ++V+ G D +D + +P+ L
Sbjct: 650 NLEGN-----AIARPFLGHQGDVTSVAFSPDGQTIVSGG-GDGTVRLWD--RQGNPIGLP 701
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
F+GH VT + F D T+V+ G DG ++LW++ + ++GH + V S
Sbjct: 702 FEGHEGDVTSVAFSPDGQTIVSGGGDGTVRLWDLFGDSIGEPFRGHEDKVAAVAFS--PD 759
Query: 288 GGLLGCGSETNQVFVYDVR 306
G + GS V ++D++
Sbjct: 760 GEKIASGSWDTTVRLWDLQ 778
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 33/282 (11%)
Query: 33 SSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY 92
S P D + + F P A+G +R+++++ + P H DY
Sbjct: 739 SIGEPFRGHEDKVAAVAFSPDGEKIASGSWDTTVRLWDLQGKTIGRPFRG---HE---DY 792
Query: 93 YICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK 152
I ++ + P G+++ SG D VV +DL PI + V S+ +S
Sbjct: 793 VI-------AIAFDP--EGKLIASGSSDKVVRLWDLSGN-PIGQPLRGHTSSVRSLAFSP 842
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF------GSSLVA 206
D S S D ++++WD R G +Q +V V F P + A
Sbjct: 843 -DGQTVTSASTDKSVRLWDLR--GNALHRPIQ--GHEVSVWSVAFSPTPVDKEGKEEIFA 897
Query: 207 AGCADKKAYAYDVRKMVDPV-LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDS 264
G D +D+ +P+ GH VT + F D T+ + D ++LWN+ +
Sbjct: 898 TGGGDGTVRLWDLSG--NPIGQPLRGHAGDVTSVAFSPDGQTIASGSWDRTIRLWNLASN 955
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ R ++GH N+ V S G + GS + ++D++
Sbjct: 956 PIARPFQGHENDVTSVAFS--PDGEKIASGSWDKTIRLWDLK 995
Score = 46.2 bits (108), Expect = 0.025, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
F GH VT + F D T+V+ DG ++LWN+ + + R + GH + V S
Sbjct: 618 FRGHEGDVTSVAFSPDGQTIVSGSGDGTVRLWNLEGNAIARPFLGHQGDVTSVAFS--PD 675
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
G + G V ++D R G P+ + FE G V+SV + G+ T+V+G
Sbjct: 676 GQTIVSGGGDGTVRLWD-RQGNPIGL-PFE------GHEGDVTSVAFSPDGQ---TIVSG 724
Query: 348 GSDGLLHVF 356
G DG + ++
Sbjct: 725 GGDGTVRLW 733
>gi|393212931|gb|EJC98429.1| WD40 repeat-like protein [Fomitiporia mediterranea MF3/22]
Length = 1172
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 140/327 (42%), Gaps = 35/327 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P A+G IRI++ V+ V + +++
Sbjct: 877 TDDVNSVTFSPDGRCIASGSSDNTIRIWD------------AVNGRPVSGPFEGHSSRVW 924
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK-GDPVLGAS 160
S+ + P GR + S D + +D E I E VWSV +S G+ V+ S
Sbjct: 925 SVVFSP--DGRRIASCSSDRTIRIWDTESGQAISAPFEGHEDTVWSVSFSPDGESVV--S 980
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDD T+++WD + G+ VS ++S V V F P G VA+G D+ +DV
Sbjct: 981 GSDDKTLRIWD--IESGRTVSGPFKEHTQS-VNSVAFSPDGR-CVASGSYDRTIILWDVG 1036
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIR-TYKGHVNNRN 278
+ H V + F + +G+ D + +W+V + I ++GH N
Sbjct: 1037 SGGIISGPLEKHTGWVCSVAFSPDGARIASGSGDKTIIIWDVKTGQPIAGPFEGHTNLVR 1096
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVG 338
V S G L+ GSE + + V+DV G + F P G+ V SV V
Sbjct: 1097 SVAFS--PDGALVVSGSEDSTLLVWDVESGRAI----FAPF---GNHMDLVRSVA---VS 1144
Query: 339 EDECTLVAGGSDGLLHVFVGKKKPLSA 365
D C +V+G D + V+ + + +S+
Sbjct: 1145 PDGCRVVSGSRDRTIKVWNIESEKISS 1171
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 129/312 (41%), Gaps = 44/312 (14%)
Query: 34 SSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPV------------ 80
SS P +D + + F + +G + +RI+++KS +V P+
Sbjct: 611 SSEPLEGHTDRVLSVAFSSDCARIVSGSADKTVRIWDVKSGQIVSGPLQGHLGWVWSVAF 670
Query: 81 ----VAVVDHSKVCDYYIC---------TPAK-----LSSLKWKPGTSGRVLGSGDYDGV 122
VV S+ I P K + S+ + P G+ + SG D
Sbjct: 671 SPDGAHVVSGSRDNTIRIWDVESGRDVHEPLKGHTDTVRSVTFSP--DGKHIASGSDDYT 728
Query: 123 VMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVST 182
++ +D++ + I + E V SV +S + ASGSDD T+ +W D GK T
Sbjct: 729 IIVWDIKTRRAISQPFEGHKGGVNSVSFSPCGKCI-ASGSDDETIVIWS--IDSGK--PT 783
Query: 183 VQPSASRSA-VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
++P S V V F G+ +V +G D+ +D + + H + + F
Sbjct: 784 LEPFRGHSQRVWSVVFSSDGTRIV-SGSNDRTIRIWDAETGCVVSEILEMHTPIIRSVAF 842
Query: 242 LDVDTLVTAGT-DGCLKLWNVNDSRVIR-TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQ 299
T V +G+ D +++W+ + + ++GH ++ N V S G + GS N
Sbjct: 843 SPDGTRVVSGSDDDMVRIWDSESEQAVSGQFEGHTDDVNSVTFS--PDGRCIASGSSDNT 900
Query: 300 VFVYDVRWGEPV 311
+ ++D G PV
Sbjct: 901 IRIWDAVNGRPV 912
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
Query: 128 LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSA 187
+++ P+ ++ R V SV +S D ASGSDD T+++WD + G+ VS+
Sbjct: 562 IKQHSPLLKKLTGHVRDVKSVAFSS-DGTRVASGSDDYTIRVWD--AESGR-VSSEPLEG 617
Query: 188 SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
V V F + +V +G ADK +DV+ GH V + F D
Sbjct: 618 HTDRVLSVAFSSDCARIV-SGSADKTVRIWDVKSGQIVSGPLQGHLGWVWSVAFSPDGAH 676
Query: 247 LVTAGTDGCLKLWNVNDSR-VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+V+ D +++W+V R V KGH + V S G + GS+ + V+D+
Sbjct: 677 VVSGSRDNTIRIWDVESGRDVHEPLKGHTDTVRSVTFS--PDGKHIASGSDDYTIIVWDI 734
Query: 306 R 306
+
Sbjct: 735 K 735
>gi|328688461|gb|AEB35842.1| COP1 [Helianthus tuberosus]
Length = 96
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPPMLVSGSDDCKVKIWCTR 83
>gi|418466350|ref|ZP_13037273.1| putative WD-repeat containing protein [Streptomyces coelicoflavus
ZG0656]
gi|371553019|gb|EHN80244.1| putative WD-repeat containing protein [Streptomyces coelicoflavus
ZG0656]
Length = 1432
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 127/351 (36%), Gaps = 78/351 (22%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD R + ++ + S S+ + F P A+GG R +R+++++ V
Sbjct: 969 WDVRTRRSTATLTGH----SGSVFALAFSPDGLTLASGGQDRTVRLWDVRGRTA---VTV 1021
Query: 83 VVDHSKVCDYYICTP--AKLSS------------LKWKPGTS----------------GR 112
+ H+ + P A L+S W+P S GR
Sbjct: 1022 LNGHAGSVNTLAFRPDGATLASGSEDAAVRLWDMRAWRPRASFAGPGGSARPADYSPDGR 1081
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
L +G DG V +D+ + P+ H G V +V +S + AS +DD ++ +WD
Sbjct: 1082 TLATGAGDGTVYLHDVRTQRPVGRLTGHTGE-VNTVRFSPDGRFVAASSNDDASVLLWDA 1140
Query: 173 RCD--------------------GGKCVSTV----------------QPSASRSAVCCVE 196
R GK ++T Q ++ SA +
Sbjct: 1141 RSHRRLANLKGHDKPVQRVLFSPDGKTLATSSYIDGTTRLWSVRTHRQLASFTSASPWMA 1200
Query: 197 FHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGC 255
F P G+ G +D R + V DG V+ + F D D L TA DG
Sbjct: 1201 FSPDGTVFATGGDEFSPVQLWDARTH-KRLGVLDGLTGRVSDLAFNPDGDLLATASWDGE 1259
Query: 256 LKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
L+LWNV D + T GH + V + G L ++DVR
Sbjct: 1260 LRLWNVQDRSLTATLAGHTDAAQSVAFTP--DGRTLASSGRDATARLWDVR 1308
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A+G+ D T Q+WD R ST + +V + F P G +L A+G D+ +D
Sbjct: 958 ATGASDATTQLWDVRTR----RSTATLTGHSGSVFALAFSPDGLTL-ASGGQDRTVRLWD 1012
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
VR V V +GH +V + F D TL + D ++LW++ R ++ G +
Sbjct: 1013 VRGRT-AVTVLNGHAGSVNTLAFRPDGATLASGSEDAAVRLWDMRAWRPRASFAGPGGSA 1071
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G L G+ V+++DVR PV
Sbjct: 1072 RPADYSP--DGRTLATGAGDGTVYLHDVRTQRPV 1103
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 25/228 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P ATG +++++++ + HS +P
Sbjct: 948 LAFSPDGDTLATGASDATTQLWDVRT---RRSTATLTGHSGSVFALAFSP---------- 994
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G L SG D V +D+ + + + H G V ++ + + D ASGS+D +
Sbjct: 995 --DGLTLASGGQDRTVRLWDVRGRTAVTVLNGHAGS-VNTLAF-RPDGATLASGSEDAAV 1050
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD R + ++R A ++ P G +L A G D Y +DVR PV
Sbjct: 1051 RLWDMRAWRPRASFAGPGGSARPA----DYSPDGRTL-ATGAGDGTVYLHDVRTQ-RPVG 1104
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGT--DGCLKLWNVNDSRVIRTYKGH 273
GH V +RF V A + D + LW+ R + KGH
Sbjct: 1105 RLTGHTGEVNTVRFSPDGRFVAASSNDDASVLLWDARSHRRLANLKGH 1152
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 126/342 (36%), Gaps = 54/342 (15%)
Query: 31 VSSSSSPNAAV----SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
+++ SSP A + ++ + F P AT G R++ ++ H VA++D
Sbjct: 750 LAAVSSPLRATLAKHTTAVTSVAFSPDGKTLATSGNDGTARLWEVRG----HRQVALLDG 805
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+++ + + P V + V + K+ + GG V+
Sbjct: 806 QS---------SQVHNAAFSPDGRTLVTSHDGWKARVWDVRTRKQTAVLT--GAGGPAVF 854
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
S D G ++ +GS G + +WD R V P V+ H S
Sbjct: 855 SPD---GSTIV--TGSRQGKVFVWDARSHRKTDELQVHPRTD-----GVQLHDLAFSADG 904
Query: 207 AGCADKKAYAYDVRKMVDPVLVFD-----------GHRKTVTYIRFL-DVDTLVTAGTDG 254
A + D R V V ++D GH VT + F D DTL T +D
Sbjct: 905 TTFAVTSSDVRDRRSRVSEVQLWDAVERKRLATLTGHTGQVTSLAFSPDGDTLATGASDA 964
Query: 255 CLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVH 314
+LW+V R T GH + L+ G L G + V ++DVR
Sbjct: 965 TTQLWDVRTRRSTATLTGHSG--SVFALAFSPDGLTLASGGQDRTVRLWDVR-------- 1014
Query: 315 DFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
VT G V+++ +R D TL +G D + ++
Sbjct: 1015 GRTAVTVLNGHAGSVNTLAFR---PDGATLASGSEDAAVRLW 1053
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 48 IEFDPSDSVFATGGIA-RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWK 106
+ F P +VFATGG +++++ ++ H + V+D ++S L +
Sbjct: 1199 MAFSPDGTVFATGGDEFSPVQLWDART----HKRLGVLD---------GLTGRVSDLAFN 1245
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P G +L + +DG + ++++ + H SV ++ L +SG D T
Sbjct: 1246 P--DGDLLATASWDGELRLWNVQDRSLTATLAGHTDA-AQSVAFTPDGRTLASSGRD-AT 1301
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
++WD R + ++T+ S AV P G +L G D+ +++
Sbjct: 1302 ARLWDVRTH--RRLATL--SGHTGAVWSAVVSPDGQTLATVGD-DRTVRLWNIETGQQLA 1356
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
L+ GH + F D DTL T+G D ++LW+ + T K
Sbjct: 1357 LLL-GHTGVLRSAVFAPDGDTLATSGDDETIRLWDTGAFNDLATLK 1401
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L A+ S DG +++W+ +T+ + A V F P G +L ++G D A
Sbjct: 1250 LLATASWDGELRLWN--VQDRSLTATL--AGHTDAAQSVAFTPDGRTLASSG-RDATARL 1304
Query: 217 YDVRKMVDPVLVFDGHRKTV-TYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+DVR + GH V + + D TL T G D ++LWN+ + + GH
Sbjct: 1305 WDVRTHRR-LATLSGHTGAVWSAVVSPDGQTLATVGDDRTVRLWNIETGQQLALLLGHT 1362
>gi|336380016|gb|EGO21170.1| hypothetical protein SERLADRAFT_475996 [Serpula lacrymans var.
lacrymans S7.9]
Length = 375
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 118/278 (42%), Gaps = 36/278 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYN-----IKSVLVDHPVVAVVDHSKVCDYYICTPA 98
SI ++F P S+ A+ + I++++ I L H
Sbjct: 78 SISALKFSPDGSILASSAADKTIKLWDGLTGGIMQTLEGHA------------------E 119
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
++ + W G+ + S D +M + E+K P+ H V+ ++YS +L
Sbjct: 120 GINDIAWS--NDGQYIASASDDKTIMLWSPEQKTPVKTLKGHT-NFVFCLNYSPHSGLL- 175
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
SG D T+++WD G+ + + A V V F+ G+ L+ + D +D
Sbjct: 176 VSGGYDETVRVWD--VARGRSMKVL--PAHSDPVTAVNFNHDGT-LIVSCAMDGLIRIWD 230
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNR 277
+ D +++RF V A T D ++LWN SR ++TY GH NR
Sbjct: 231 AESGQCLKTLVDDDNPVCSHVRFSPNSKFVLAATQDSTIRLWNYFTSRCVKTYIGHT-NR 289
Query: 278 NFVGLSVWRH--GGLLGCGSETNQVFVYDVRWGEPVWV 313
+ + + G + CGSE ++V+++D++ E V V
Sbjct: 290 TYCLVPCFSTTGGQYIVCGSEDSKVYIWDLQSREIVQV 327
>gi|392586470|gb|EIW75806.1| WD40 repeat-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 618
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 132/315 (41%), Gaps = 43/315 (13%)
Query: 6 DHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARK 65
D QQ + + ++ R WD + + +S P S I + + P + ATG + +
Sbjct: 236 DGQQVVSSSEDQSIRV-WD--IASGEYASFRPFEGHSGDITTVAYSPDGAFLATGSLDKT 292
Query: 66 IRIY------NIKSVLVDHPV-VAVVDHSKVCDYYICTPAKLSSLKWKPGTS---GRVLG 115
+RI+ I L H + + +S + + + W T GR L
Sbjct: 293 LRIWEPGTGRQIGEALEGHTGGIGSIAYSPDGQHLVSASQDYTLRVWDTQTGRQVGRALA 352
Query: 116 -------------------SGDYDGVVMEYDLE-KKVPIFERDEHGGRRVWSVDYSKGDP 155
SG DG ++ +D+ ++ I D H G V +V YS D
Sbjct: 353 GHCHGVHAVAYSPDGLRLVSGSDDGTLLVWDMHTQETVIGPLDGHTGP-VRAVQYSP-DG 410
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
L ASG+DDG ++ WD R G C+ V + RS V CV++ P G L+ A +D +
Sbjct: 411 ALIASGADDGLLKFWDART--GNCLVGVL-AGHRSRVRCVQYSPDG--LLIASASDDQTI 465
Query: 216 AYDVRKMVDPVL-VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSR-VIRTYKG 272
DP+ GHR V+ I F D LV+A D +++W+V + ++ G
Sbjct: 466 RLWNSWTGDPITGPLRGHRNCVSSISFSYDGQKLVSASEDESVRVWDVASGQCLLGPLYG 525
Query: 273 HVNNRNFVGLSVWRH 287
H+ + S+ +H
Sbjct: 526 HMEPVIAISCSLDKH 540
>gi|328688373|gb|AEB35798.1| COP1 [Helianthus petiolaris]
gi|328688375|gb|AEB35799.1| COP1 [Helianthus petiolaris]
gi|328688377|gb|AEB35800.1| COP1 [Helianthus petiolaris]
gi|328688379|gb|AEB35801.1| COP1 [Helianthus petiolaris]
Length = 90
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 2 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQKSVMEYEEHE-KRVWSVDFSRI 59
Query: 154 DPVLGASGSDDGTMQMWDPRCDGG 177
+P + SGSDD +++W R +
Sbjct: 60 EPSMLVSGSDDCKVKIWCTRQESS 83
>gi|167518311|ref|XP_001743496.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778595|gb|EDQ92210.1| predicted protein [Monosiga brevicollis MX1]
Length = 402
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 40/289 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA----------------VVDHSKVCD 91
+ F+P+ + A+GG+ + ++N K + +V V S+ C
Sbjct: 20 VSFNPNLTQVASGGLDGAVMVWNRKQSMRAFRLVGHKDGVQSVQFSPSGRLVASGSRDCT 79
Query: 92 YYICTPA---KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFE------RDEHGG 142
+ P+ + + K GT V S D + D +K + IF R G
Sbjct: 80 VRLWVPSVKGESTVFKAHTGTVRCVRFSQDGSFLATSSD-DKSIKIFSTYRQKFRLSLKG 138
Query: 143 RRVWSVDYSKG-DPVLGASGSDDGTMQMWDPRCDGGKCVSTV-QPSASRSAVCCVEFHPF 200
W S D L ASGSDD T+++WD C T +P + V FHP
Sbjct: 139 HTNWVRSVSPSPDGRLVASGSDDKTVKIWD--LASKTCAQTFFEPDG---MITSVAFHPD 193
Query: 201 GSSLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKL 258
G+ VAAGC+D +D+R K++ V D +++ D L+TA TD LK+
Sbjct: 194 GT-CVAAGCSDSTVKIWDIRTNKLLQHYQVHDDAVNDISF--HASGDFLLTASTDSTLKI 250
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
++ + + T GH + S G + G N+V V+ R+
Sbjct: 251 LDLREGHLFYTLHGHQDAATAAAFSP--DGSMFASGGADNKVLVWQTRF 297
>gi|145545815|ref|XP_001458591.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426412|emb|CAK91194.1| unnamed protein product [Paramecium tetraurelia]
Length = 1096
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 104/242 (42%), Gaps = 22/242 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G L SG YD + +D+ FE H G V+SV +S +L ASGSDD ++++W
Sbjct: 406 GTTLASGSYDNSIRLWDVMTGQQKFELKGHDGI-VYSVCFSSDGTIL-ASGSDDNSIRLW 463
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D K + V V F P G++L A+ D +DVR L FD
Sbjct: 464 DTTTGYQK----AKLDGHDDWVISVCFSPDGTTL-ASASDDNSIRLWDVRTGQQK-LKFD 517
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH TV + F D TL + D ++LW V + ++GH V S G
Sbjct: 518 GHTSTVYSVCFSPDGTTLASGSHDNSIRLWEVKTGQQKFEFEGHDGIVYSVCFS--PDGK 575
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
++ GS+ + ++DV G+ + G G + S+C+ D TL +G
Sbjct: 576 IIASGSDDKSIRLWDVNLGQ-------QKAKLDGHNSG-IYSICF---SPDGATLASGSL 624
Query: 350 DG 351
D
Sbjct: 625 DN 626
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 101/248 (40%), Gaps = 36/248 (14%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD NL + N+ + I F P + A+G + IR+++IK ++
Sbjct: 589 WDVNLGQQKAKLDGHNSGIYS----ICFSPDGATLASGSLDNSIRLWDIK---IEQQKAK 641
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ HS Y+ + + G L SG D + +D + D H
Sbjct: 642 LDGHSN----YVMSVC--------FSSDGTKLASGSLDNSIRLWDANVGQQRAQVDGHAS 689
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS----RSAVCCVEFH 198
V+SV +S L ASGS+D ++ +WD V T Q A + V V F
Sbjct: 690 -SVYSVCFSPDGTTL-ASGSNDNSICLWD--------VKTGQQQAKLDGHSNHVLSVCFS 739
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLK 257
P G++L A+G +DK +DV+ DGH + + F D TL + D ++
Sbjct: 740 PDGTTL-ASGSSDKSIRFWDVKTGQQKT-KLDGHTGYIMSVCFSCDGATLASGSIDTSIR 797
Query: 258 LWNVNDSR 265
LWN R
Sbjct: 798 LWNAKTVR 805
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 120/301 (39%), Gaps = 38/301 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + A+G IR+++ V+ + H + Y +C +
Sbjct: 402 FSPDGTTLASGSYDNSIRLWD---VMTGQQKFELKGHDGIV-YSVCFSS----------- 446
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G +L SG D + +D + D H V SV +S L AS SDD ++++
Sbjct: 447 DGTILASGSDDNSIRLWDTTTGYQKAKLDGHDD-WVISVCFSPDGTTL-ASASDDNSIRL 504
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD R K ++ S V V F P G++L A+G D ++V K F
Sbjct: 505 WDVRTGQQK----LKFDGHTSTVYSVCFSPDGTTL-ASGSHDNSIRLWEV-KTGQQKFEF 558
Query: 230 DGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH V + F ++ +G+ D ++LW+VN + GH N + G
Sbjct: 559 EGHDGIVYSVCFSPDGKIIASGSDDKSIRLWDVNLGQQKAKLDGH--NSGIYSICFSPDG 616
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
L GS N + ++D++ + D +V SVC+ G T +A G
Sbjct: 617 ATLASGSLDNSIRLWDIKIEQQKAKLD--------GHSNYVMSVCFSSDG----TKLASG 664
Query: 349 S 349
S
Sbjct: 665 S 665
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 123/311 (39%), Gaps = 37/311 (11%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + A+G IR++ +K+ H + Y +C + P
Sbjct: 528 FSPDGTTLASGSHDNSIRLWEVKT---GQQKFEFEGHDGIV-YSVC---------FSP-- 572
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G+++ SG D + +D+ + D H ++S+ +S L ASGS D ++++
Sbjct: 573 DGKIIASGSDDKSIRLWDVNLGQQKAKLDGHNSG-IYSICFSPDGATL-ASGSLDNSIRL 630
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + + K + + V V F G+ L A+G D +D V
Sbjct: 631 WDIKIEQQKA----KLDGHSNYVMSVCFSSDGTKL-ASGSLDNSIRLWDANVGQQRAQV- 684
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
DGH +V + F D TL + D + LW+V + GH N+ V S G
Sbjct: 685 DGHASSVYSVCFSPDGTTLASGSNDNSICLWDVKTGQQQAKLDGHSNHVLSVCFS--PDG 742
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
L GS + +DV+ G + T G++ SVC+ D TL +G
Sbjct: 743 TTLASGSSDKSIRFWDVKTG--------QQKTKLDGHTGYIMSVCF---SCDGATLASGS 791
Query: 349 SDGLLHVFVGK 359
D + ++ K
Sbjct: 792 IDTSIRLWNAK 802
>gi|261328864|emb|CBH11842.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 813
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLD-----------VDTLV 248
F S++V ++K YD+ + ++ + H + + + L + +
Sbjct: 655 FASNVVVWAASNKSFGVYDLHVGQNINMIEEAHTRPIHSVALLTAGRYASIGSNHLHMCL 714
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
TAG D ++LW++ R +R H +N VG++ G L+ GSET VF+YDV G
Sbjct: 715 TAGMDSTVRLWDIRQKRSVRQLAQHRSNATAVGVAFSPTGALVAVGSETRNVFIYDVGSG 774
Query: 309 EPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
V D PVT +++CW + E L G S+G
Sbjct: 775 A---VLDKLPVTDTA------TAICWHPI---ENVLAIGTSNG 805
>gi|427725486|ref|YP_007072763.1| WD-40 repeat-containing protein [Leptolyngbya sp. PCC 7376]
gi|427357206|gb|AFY39929.1| WD-40 repeat-containing protein [Leptolyngbya sp. PCC 7376]
Length = 1177
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 70/290 (24%), Positives = 115/290 (39%), Gaps = 27/290 (9%)
Query: 21 CEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV 80
C WD N + P S+ + + F P D ATG I ++++K++
Sbjct: 872 CLWDLNKGAYIQ----PLRQHSNVVASVAFSPDDHFLATGSGDGTICLWDLKTL------ 921
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
KV + A SL + SG L SG D + +DLE + +R
Sbjct: 922 ----GCIKVFAFEDGNHAPAWSLDFN--RSGTRLISGGVDRNLRIWDLEN-YQLLQRLSG 974
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
+WSV YS + ++ ASG + G + +WD G Q AS A+ + FHP
Sbjct: 975 HNDWIWSVTYSPDNQII-ASGDESGLIILWD----GNSFQQKHQFQASSGAIRSIAFHPN 1029
Query: 201 GSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLW 259
G + G D + +DV ++ + H + F D L + ++LW
Sbjct: 1030 GDRFASMG-DDGQVCVWDVNTH-QCLVTIESHEHMNFSVAFSPDGKWLACGSYENTIRLW 1087
Query: 260 NVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
N D + + GH N ++ G L GS+ ++++D G+
Sbjct: 1088 NTKDYQCSQVLSGH--NEPVWLVAFHPQGKTLASGSQNGHIYLWDFEDGK 1135
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 88/367 (23%), Positives = 150/367 (40%), Gaps = 71/367 (19%)
Query: 20 RCEWDFN---LRTTVSSSSSPN-----------AAVSDSIGVI---EFDPSDSVFATGGI 62
R E+DF+ +R +S+ N A+SDS G+I P + GG
Sbjct: 515 RYEYDFSGFTIRQACLKNSNQNRFIFRNSLFVRPALSDSFGLIFSVRISPDGNHLFAGGS 574
Query: 63 ARKIRIYNIKS-----------------VLVDHP--VVAVVDHSKVCDYYICTPAKLSSL 103
I ++NI + + +H + +H ++ + + T L +L
Sbjct: 575 DGTIHVWNIHTREYTASLQGHSSWLRAIAMSEHNRLIAGSHEHGEIRFWDLDTFQHLETL 634
Query: 104 KWKPGT--------SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
K + G+ +L G DG + + +++ F+ + R++SV +S D
Sbjct: 635 KLQGGSVLSTAFSPEQDILAVGCRDGQIRLCMIGERIECFQTIKAHSLRIFSVRFSP-DG 693
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
+L ASGS DG +++W+ KCV + + S V V FHP GS L+A+G DK
Sbjct: 694 MLLASGSQDGCIKLWN--TTSYKCVIEL---VADSYVFSVAFHPNGS-LLASGHEDKCIR 747
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+++ + F + D + L + DG ++LW+V D I+ ++ H
Sbjct: 748 LWNLHTG-QCLNCFQLEEFVFSVAFSPDGEILASGSEDGSVRLWSVQDRNCIKVFQDHTQ 806
Query: 276 NRNFVGLSVWRH--GGLLGCGSETNQVFVYDVR--------WGEPV--WVHDFEP---VT 320
SV H +L GSE + +D++ G P W + P
Sbjct: 807 RI----WSVAFHPIDNMLISGSEDCSIRFWDIKEQKCLQVLQGYPYAHWSLAYSPNGQFL 862
Query: 321 AAGSERG 327
A GSE+G
Sbjct: 863 ATGSEKG 869
Score = 47.8 bits (112), Expect = 0.008, Method: Composition-based stats.
Identities = 68/307 (22%), Positives = 126/307 (41%), Gaps = 65/307 (21%)
Query: 41 VSDS-IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK 99
V+DS + + F P+ S+ A+G + IR++N+ H+ C
Sbjct: 720 VADSYVFSVAFHPNGSLLASGHEDKCIRLWNL--------------HTGQCLNCFQLEEF 765
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ S+ + P G +L SG DG V + ++ + I +H +R+WSV + D +L
Sbjct: 766 VFSVAFSP--DGEILASGSEDGSVRLWSVQDRNCIKVFQDHT-QRIWSVAFHPIDNML-I 821
Query: 160 SGSDDGTMQMWD---PRC----------------------------DGGKCV------ST 182
SGS+D +++ WD +C G C+ +
Sbjct: 822 SGSEDCSIRFWDIKEQKCLQVLQGYPYAHWSLAYSPNGQFLATGSEKGNFCLWDLNKGAY 881
Query: 183 VQPSASRS-AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF---DGHRKTVTY 238
+QP S V V F P +A G D +D+ K + + VF DG+
Sbjct: 882 IQPLRQHSNVVASVAFSP-DDHFLATGSGDGTICLWDL-KTLGCIKVFAFEDGNHAPAWS 939
Query: 239 IRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSET 297
+ F T L++ G D L++W++ + ++++ GH N ++ ++ G E+
Sbjct: 940 LDFNRSGTRLISGGVDRNLRIWDLENYQLLQRLSGH--NDWIWSVTYSPDNQIIASGDES 997
Query: 298 NQVFVYD 304
+ ++D
Sbjct: 998 GLIILWD 1004
>gi|427414552|ref|ZP_18904739.1| WD40 repeat-containing protein [Leptolyngbya sp. PCC 7375]
gi|425755696|gb|EKU96559.1| WD40 repeat-containing protein [Leptolyngbya sp. PCC 7375]
Length = 1494
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 24/249 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTMQM 169
G+ L SG D V+ + + D G W + + K D + ASGSDD T+++
Sbjct: 1088 GKKLASGSQDRVIKVWSTHSGDCL---DTLEGHSDWVLSLAFKPDGQMLASGSDDQTVKL 1144
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W + G C+ T+ ++ A+ + + P G++L + G D + + + F
Sbjct: 1145 WS--LESGNCIRTL--TSHSHALLSIAYSPDGTTLASGG--DDQTVKLWATNSGNCIRTF 1198
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
+GH V + F D L ++ D +KLW++ I TYKGH ++ + S G
Sbjct: 1199 EGHLNAVRAVAFSPDGRLLASSSNDQTVKLWSLESGNCIHTYKGHQSSVRAIAFS--PDG 1256
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL S ++ ++ GE +H +E G S V D TL +G
Sbjct: 1257 RLLASSSNDQKIKLWATDSGEC--IHTYE---------GHSSLVLSLAFSPDGKTLASGS 1305
Query: 349 SDGLLHVFV 357
+D + ++V
Sbjct: 1306 NDSTVKLWV 1314
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 110/268 (41%), Gaps = 26/268 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SDS+ + P A+G R I++++++S ++ H+ +P
Sbjct: 992 SDSVWSVAISPDGKTLASGSRDRTIKLWSLES---GDCILTFEGHTTGVLSIAISP---- 1044
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
G +L S D V + LE + + H VW+V +S L ASG
Sbjct: 1045 --------DGNILASSSGDHSVKLWSLESGDCLRTLNGHTDG-VWAVTFSPDGKKL-ASG 1094
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D +++W G C+ T++ + V + F P G ++A+G D+ + +
Sbjct: 1095 SQDRVIKVWSTH--SGDCLDTLEGHSD--WVLSLAFKPDGQ-MLASGSDDQTVKLWSLES 1149
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + H + I + D TL + G D +KLW N IRT++GH+N V
Sbjct: 1150 G-NCIRTLTSHSHALLSIAYSPDGTTLASGGDDQTVKLWATNSGNCIRTFEGHLNAVRAV 1208
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWG 308
S G LL S V ++ + G
Sbjct: 1209 AFS--PDGRLLASSSNDQTVKLWSLESG 1234
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 11/200 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR+L S D V + LE I H V ++ +S D L AS S+D +++W
Sbjct: 1214 GRLLASSSNDQTVKLWSLESGNCIHTYKGHQSS-VRAIAFSP-DGRLLASSSNDQKIKLW 1271
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+C+ T + +S V + F P G +L A+G D + V+ +
Sbjct: 1272 --ATDSGECIHTYEGHSS--LVLSLAFSPDGKTL-ASGSNDSTVKLW-VQDSDNCFATLQ 1325
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D +TL + G+D + LW++N I T +GH V S G
Sbjct: 1326 GHSTAVRTVAFSPDGNTLASGGSDKTICLWSINLGNCIHTLQGHTKRIWSVEFS--PDGK 1383
Query: 290 LLGCGSETNQVFVYDVRWGE 309
L GS+ ++ V G+
Sbjct: 1384 TLASGSDDQTAKLWSVDSGD 1403
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 45/241 (18%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW----------SVD 149
+ SL + P + + L GD+ V +D+ G+ VW SV
Sbjct: 869 IRSLTFSPDS--KYLAIGDFKNTVQIWDIVT-----------GQVVWFCLGHSDWVASVT 915
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
+S D L ASGSDD +++W + GKC+ T + V V F +LV+A
Sbjct: 916 FS-SDGKLLASGSDDHVVKLWS--TNSGKCIRTF--TGHSGWVLSVAFSSDTKTLVSASK 970
Query: 210 ADK-KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVI 267
K + + K + F+GH +V + D TL + D +KLW++ I
Sbjct: 971 DHTIKLWCIESGKCLR---TFEGHSDSVWSVAISPDGKTLASGSRDRTIKLWSLESGDCI 1027
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG----------EPVWVHDFE 317
T++GH + +++ G +L S + V ++ + G + VW F
Sbjct: 1028 LTFEGHTT--GVLSIAISPDGNILASSSGDHSVKLWSLESGDCLRTLNGHTDGVWAVTFS 1085
Query: 318 P 318
P
Sbjct: 1086 P 1086
>gi|255567774|ref|XP_002524865.1| WD-repeat protein, putative [Ricinus communis]
gi|223535828|gb|EEF37489.1| WD-repeat protein, putative [Ricinus communis]
Length = 345
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 29/269 (10%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
++ ++F+P+ ++ A+G + I ++ + H + ++ + K + L
Sbjct: 57 AVYTMKFNPAGNLIASGSHDKDIFLWYV--------------HGECKNFMVLKGHKNAVL 102
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
T G + S D V +D+E I + EH V S ++ P L SGSD
Sbjct: 103 DLHWTTDGSQIISASPDKTVRAWDIETGKQIKKMAEHSSF-VNSCCPTRRGPPLVVSGSD 161
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
DGT ++WD R G +Q + + V F S + G D + +D+RK
Sbjct: 162 DGTAKLWDMRQRGA-----IQTFPDKYQITAVSFSD-ASDKIFTGGIDNEVKVWDLRKG- 214
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN-- 276
+ + +GH+ +T ++ D L+T G D L +W++ +R ++ +GH +N
Sbjct: 215 EVTMKLEGHQDMITGMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFE 274
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+N + + G + GS V+++D
Sbjct: 275 KNLLKCNWSPDGTKVTAGSSDRMVYIWDT 303
>gi|443693499|gb|ELT94847.1| hypothetical protein CAPTEDRAFT_177482 [Capitella teleta]
Length = 667
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRV+ +G D V + + K I H V +V + + ++ A GS G +++
Sbjct: 30 SGRVMVTGGDDKKVNMWAIGKPNAIMSLSGHTSP-VEAVRFGNAEEMVVA-GSMSGALKI 87
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ + +S+V + FHP+G VA+G D +D+R+ + +
Sbjct: 88 WD--LEEAKIMRTL--TGHKSSVRSLHFHPYGD-YVASGSLDTNIKLWDIRRK-GCIFTY 141
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
GH V ++F D + +AG DG LKLW++ +++ ++GH ++
Sbjct: 142 KGHSGCVNDLKFSPDGKWIASAGEDGLLKLWDLTAGKMLTDFRGHTSS 189
>gi|328688717|gb|AEB35970.1| COP1 [Helianthus annuus]
Length = 83
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 5 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 62
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 63 EPSMLVSGSDDCKVKIWCTR 82
>gi|83776065|dbj|BAE66184.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 324
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S S+ + F P A+G + I++++ K+ D + HS +P
Sbjct: 80 SSSVLSVAFSPDGQTIASGSSDKTIKLWDAKT---DTELQTFKGHSDGVRSVAFSP---- 132
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
G+ + SG YD + +D + ++ F+ G R SV +S + A
Sbjct: 133 --------DGQTIASGSYDRTIKLWDPKTGTELQTFKGHSDGVR---SVAFSPDGQTI-A 180
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WDP+ G + T + V V F P G + +A+G DK +D
Sbjct: 181 SGSYDRTIKLWDPKT--GTELQTFK--GHSDGVRSVAFSPDGQT-IASGSYDKTIKLWDA 235
Query: 220 RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH----- 273
R + + GH V + F D T+ + D +KLW+ ++T KGH
Sbjct: 236 RTGTE-LQTLKGHSDGVRSVAFSRDGQTIASGSYDKTIKLWDARTGTELQTLKGHSVSSV 294
Query: 274 VNNRNF 279
+N NF
Sbjct: 295 MNEPNF 300
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 24/248 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ + SG D + +D + + + H V SV +S + ASGS D T+++W
Sbjct: 50 GQTIASGSSDTTIKLWDAKTGMELQTFKGHS-SSVLSVAFSPDGQTI-ASGSSDKTIKLW 107
Query: 171 DPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
D + D + +Q S V V F P G + +A+G D+ +D + + + F
Sbjct: 108 DAKTD-----TELQTFKGHSDGVRSVAFSPDGQT-IASGSYDRTIKLWDPKTGTE-LQTF 160
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V + F D T+ + D +KLW+ ++T+KGH + V S G
Sbjct: 161 KGHSDGVRSVAFSPDGQTIASGSYDRTIKLWDPKTGTELQTFKGHSDGVRSVAFSP--DG 218
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
+ GS + ++D R G E T G G V SV + R G+ T+ +G
Sbjct: 219 QTIASGSYDKTIKLWDARTGT-------ELQTLKGHSDG-VRSVAFSRDGQ---TIASGS 267
Query: 349 SDGLLHVF 356
D + ++
Sbjct: 268 YDKTIKLW 275
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
S+V V F P G + +A+G +D +D + ++ + F GH +V + F D T+
Sbjct: 39 SSVLSVAFSPDGQT-IASGSSDTTIKLWDAKTGME-LQTFKGHSSSVLSVAFSPDGQTIA 96
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+ +D +KLW+ ++T+KGH + V S G + GS + ++D + G
Sbjct: 97 SGSSDKTIKLWDAKTDTELQTFKGHSDGVRSVAFSP--DGQTIASGSYDRTIKLWDPKTG 154
>gi|355697101|gb|AES00561.1| katanin p80 subunit B 1 [Mustela putorius furo]
Length = 164
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+GS G++++WD + K + T+ ++ +C ++FHP+G VA+G D +D+
Sbjct: 3 AGSQSGSIRVWD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDI 57
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
R+ V + GH + V +RF D L +A D +KLW++ +++ + GH N
Sbjct: 58 RRK-GCVFRYRGHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN 116
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCW 334
V + LL GS + +D+ F+ V+ E G V SV +
Sbjct: 117 VVEFHPNEY--LLASGSSDRTIRFWDLE--------KFQVVSCIEGEPGPVRSVLF 162
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 13/160 (8%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
+G G + +DLE + H + S+D+ + ASGS D +++WD R
Sbjct: 3 AGSQSGSIRVWDLEAAKILRTLMGHKAN-ICSLDFHPYGEFV-ASGSQDTNIKLWDIRRK 60
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLVFDGHR 233
G CV + AV C+ F P G L A+ D +D+ KM+ F GH
Sbjct: 61 G--CVFRYR--GHTQAVRCLRFSPDGKWL-ASAADDHTVKLWDLTAGKMMSE---FPGHT 112
Query: 234 KTVTYIRFLDVDTLVTAG-TDGCLKLWNVNDSRVIRTYKG 272
V + F + L+ +G +D ++ W++ +V+ +G
Sbjct: 113 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEG 152
>gi|428320673|ref|YP_007118555.1| serine/threonine protein kinase with WD40 repeats [Oscillatoria
nigro-viridis PCC 7112]
gi|428244353|gb|AFZ10139.1| serine/threonine protein kinase with WD40 repeats [Oscillatoria
nigro-viridis PCC 7112]
Length = 689
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 140/319 (43%), Gaps = 48/319 (15%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ I P + IRI+N+++ + + +V HSK +++L
Sbjct: 410 SVNAIALSPDGKTLVSASFG-TIRIWNVRTGRLVRTLNSV--HSK---------KSVNTL 457
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
P G +L SG D V+ +DL+ + H V ++ +S+ L ASGSD
Sbjct: 458 AVSP--DGSILASGGGDKNVILWDLKTGRRMRTIPAHTAP-VNAIAFSRDGQTL-ASGSD 513
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY-----D 218
D T+++WD + G + T+ S V + F G +L A+G DK + +
Sbjct: 514 DKTVRLWDVKT--GSRLRTL--SGHAGGVNAIAFSRDGQTL-ASGSDDKTVRLWNLNTGE 568
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
VR+++ GH V + F + T+ +A TD ++L NV D + RT+KGH
Sbjct: 569 VRRIIT------GHGGPVNAVAFSPNGKTVASASTDNTIRLSNVQDGKRTRTFKGHSGRV 622
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
+ S + G G + V+D++ G+ E T +G + FVSSV +
Sbjct: 623 RTIAFSPDSRTLISGGG----DIIVWDLKTGK-------ERNTLSGHSQ-FVSSVA---I 667
Query: 338 GEDECTLVAGGSDGLLHVF 356
D T V+G D + ++
Sbjct: 668 ARDSKTFVSGSPDRTIKIW 686
>gi|328688433|gb|AEB35828.1| COP1 [Helianthus exilis]
gi|328688435|gb|AEB35829.1| COP1 [Helianthus exilis]
Length = 90
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 2 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 59
Query: 156 VLGASGSDDGTMQMWDPR 173
+ SGSDD +++W R
Sbjct: 60 SMLVSGSDDCKVKIWCTR 77
>gi|449677149|ref|XP_002163792.2| PREDICTED: uncharacterized protein LOC100197286 [Hydra
magnipapillata]
Length = 500
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 24/152 (15%)
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLD-----------VDTLV 248
F S LV A C+++ + YD+ + D H + + ++ D V
Sbjct: 334 FYSYLVLASCSNRDIFVYDMNVRQIRQTIKDAHTRLIHSLKQNQGSVAVTQASEAYDLFV 393
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
TA + +KLW++ SR +R ++GH+N +GLS + GSE V++YD+R
Sbjct: 394 TAASTDGVKLWDLRLSRCVRKFEGHINRSQKIGLSFSPCSKYIAVGSEDRSVYIYDIRSS 453
Query: 309 E-------------PVWVHDFEPVTAAGSERG 327
+ H P+ A GS G
Sbjct: 454 SYLHRLGGHSDVVTAIAFHPVNPMIACGSRSG 485
>gi|428309916|ref|YP_007120893.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
gi|428251528|gb|AFZ17487.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 666
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 105/261 (40%), Gaps = 36/261 (13%)
Query: 23 WDFN----LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH 78
WDF+ +RT + +S I P ATGG I I++ S
Sbjct: 410 WDFSTGKEIRTLIEASIP--------INYFALSPDWQTLATGGTGNTIAIWDFDS---GQ 458
Query: 79 PVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERD 138
+ + HS +Y + +P G+ L S D + +D + +
Sbjct: 459 KIKTLKGHSSYVNYVVISP------------DGKKLASASADHTIKIWDFSTGKELLTLN 506
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
EH + G + AS S D T+++WD GK + T+ + +V +
Sbjct: 507 EHSSYVNYIAITPDGKKL--ASASADNTIKIWD--LSSGKELLTL--TGHSGSVNSLAIT 560
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLK 257
P G L A+ AD +D+ + + GH V + D +TLV+A D +K
Sbjct: 561 PDGRKL-ASASADNTIKIWDLSSGKE-LFTLTGHSSPVKPLAITPDGNTLVSASADHEIK 618
Query: 258 LWNVNDSRVIRTYKGHVNNRN 278
+WN++ R I+T +GH ++ N
Sbjct: 619 IWNISTGREIQTIEGHSSSVN 639
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 20/193 (10%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A+G T+ +WD D G+ + T++ S V V P G L A+ AD +D
Sbjct: 441 ATGGTGNTIAIWD--FDSGQKIKTLK--GHSSYVNYVVISPDGKKL-ASASADHTIKIWD 495
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ +L + H V YI D L +A D +K+W+++ + + T GH +
Sbjct: 496 FSTGKE-LLTLNEHSSYVNYIAITPDGKKLASASADNTIKIWDLSSGKELLTLTGHSGSV 554
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
N L++ G L S N + ++D+ G+ ++ + G S V +
Sbjct: 555 N--SLAITPDGRKLASASADNTIKIWDLSSGKELF-----------TLTGHSSPVKPLAI 601
Query: 338 GEDECTLVAGGSD 350
D TLV+ +D
Sbjct: 602 TPDGNTLVSASAD 614
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 36/244 (14%)
Query: 23 WDFN----LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDH 78
WDF+ ++T SS N V P A+ I+I++ +
Sbjct: 452 WDFDSGQKIKTLKGHSSYVNYVV--------ISPDGKKLASASADHTIKIWDFST---GK 500
Query: 79 PVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERD 138
++ + +HS +Y TP G+ L S D + +DL +
Sbjct: 501 ELLTLNEHSSYVNYIAITP------------DGKKLASASADNTIKIWDLSSGKELLTLT 548
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH 198
H G V S+ + L AS S D T+++WD GK + T+ + S V +
Sbjct: 549 GHSGS-VNSLAITPDGRKL-ASASADNTIKIWD--LSSGKELFTL--TGHSSPVKPLAIT 602
Query: 199 PFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLK 257
P G++LV+A AD + +++ + + +GH +V + D LV+A DG +K
Sbjct: 603 PDGNTLVSA-SADHEIKIWNISTGRE-IQTIEGHSSSVNSLLITPDGKKLVSASADGTIK 660
Query: 258 LWNV 261
+W +
Sbjct: 661 IWRM 664
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVT 249
S + + P G SL+++ ADKK +D + + + + D TL T
Sbjct: 384 SYINYLVMTPDGKSLLSS-SADKKIKLWDFSTGKEIRTLIEASIPINYFALSPDWQTLAT 442
Query: 250 AGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
GT + +W+ + + I+T KGH + N+V +S G L S + + ++D G+
Sbjct: 443 GGTGNTIAIWDFDSGQKIKTLKGHSSYVNYVVIS--PDGKKLASASADHTIKIWDFSTGK 500
>gi|328688575|gb|AEB35899.1| COP1 [Helianthus annuus]
gi|328688577|gb|AEB35900.1| COP1 [Helianthus annuus]
gi|328688703|gb|AEB35963.1| COP1 [Helianthus annuus]
gi|328688705|gb|AEB35964.1| COP1 [Helianthus annuus]
Length = 84
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 2 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 59
Query: 156 VLGASGSDDGTMQMWDPR 173
+ SGSDD +++W R
Sbjct: 60 SMLVSGSDDCKVKIWCTR 77
>gi|440803925|gb|ELR24808.1| peroxisome biosynthesis protein (Peroxine7), putative [Acanthamoeba
castellanii str. Neff]
Length = 325
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 9/193 (4%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SG +D V + E+ I EH V+S +S L AS S DGT+++WD
Sbjct: 130 SGAWDNTVKFWSPERHESIRTWREHS-YCVYSTIWSPTSATLFASASGDGTLRLWDVNEA 188
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
G + V P+ V ++ + +++ +G DK +D+RK DP+ V GH
Sbjct: 189 GA---ALVIPAHGGMEVLTCDWSKYNDNILVSGSVDKSIKVWDIRKPRDPLFVLQGHTFA 245
Query: 236 VTYIRF--LDVDTLVTAGTDGCLKLWNVN--DSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
V ++ + + + + D + LW++ + ++ Y+ H V +++ G +
Sbjct: 246 VRRLKCSPYNENIIASVSYDMSMMLWDLGRPEDPFMQRYEHHTEFALGVDFNIFVEGQVA 305
Query: 292 GCGSETNQVFVYD 304
C + +VFV+D
Sbjct: 306 TCAWD-ERVFVFD 317
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S W P TS + S DG + +D+ + HGG V + D+SK + + SG
Sbjct: 160 STIWSP-TSATLFASASGDGTLRLWDVNEAGAALVIPAHGGMEVLTCDWSKYNDNILVSG 218
Query: 162 SDDGTMQMWDPRCDGGKC-VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D ++++WD R V A R C P+ +++A+ D +D+
Sbjct: 219 SVDKSIKVWDIRKPRDPLFVLQGHTFAVRRLKCS----PYNENIIASVSYDMSMMLWDLG 274
Query: 221 KMVDPVL 227
+ DP +
Sbjct: 275 RPEDPFM 281
>gi|328688499|gb|AEB35861.1| COP1 [Helianthus annuus]
gi|328688501|gb|AEB35862.1| COP1 [Helianthus annuus]
Length = 86
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 2 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 59
Query: 156 VLGASGSDDGTMQMWDPR 173
+ SGSDD +++W R
Sbjct: 60 SMLVSGSDDCKVKIWCTR 77
>gi|224073009|ref|XP_002191402.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Taeniopygia
guttata]
Length = 491
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 28/275 (10%)
Query: 24 DFNLRTTVSS-SSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
D NL T+ S++ A V + D D A+ ++++N++S D PV
Sbjct: 231 DCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVSLASCAADGSVKLWNLES---DEPVAD 287
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ HS +++ + W P SGR LG+ YD +DLE + I ++ H
Sbjct: 288 IEGHS----------MRVARVMWHP--SGRFLGTTCYDHSWRLWDLEAQEEILHQEGH-S 334
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
+ V+ + + D L +G D ++WD R G+C+ ++ + + F P G
Sbjct: 335 KGVYDIAFHT-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGY 389
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWN 260
VA G D +D+R+ + H+ VT +RF + L+T D K+W
Sbjct: 390 H-VATGSGDNTCKVWDLRQR-KCIYTIPAHQNLVTGVRFEPNHGNFLLTGAYDNTAKIWT 447
Query: 261 VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 448 HPGWSPLKTLAGHEG--KVMGLDISLDGQLIATCS 480
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+V K D L AS + DG++++W+ D + V+ ++ + R V V +HP G +
Sbjct: 255 TVSLDKKDVSL-ASCAADGSVKLWNLESD--EPVADIEGHSMR--VARVMWHPSGR-FLG 308
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSR 265
C D +D+ + +L +GH K V I F +L T G D ++W++ R
Sbjct: 309 TTCYDHSWRLWDLEAQ-EEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGR 367
Query: 266 VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
I +GH+ + G++ +G + GS N V+D+R
Sbjct: 368 CIMFLEGHL--KEIYGINFSPNGYHVATGSGDNTCKVWDLR 406
>gi|414075950|ref|YP_006995268.1| WD-40 repeat-containing protein [Anabaena sp. 90]
gi|413969366|gb|AFW93455.1| WD-40 repeat-containing protein [Anabaena sp. 90]
Length = 698
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++SL + P G+ L SG D + +D+ + IF H RV +V +S +L A
Sbjct: 457 INSLDFSPD--GKFLVSGSDDKTIKLWDVNLGIEIFTFTGHQ-ERVNAVSFSPLGKIL-A 512
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA-AGCADKKAYAYD 218
SGS D T+++W + GK V + + + V V F P G L + AG DK
Sbjct: 513 SGSKDKTVKLWS--LETGKEVYSFK--SHTDDVLSVTFSPDGKLLASSAGGNDKTIKILQ 568
Query: 219 VRKMVDPVLVFDGHRK---TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+ + + V GH +T + F D TL++ D +KLWN+ S+ I+T GH
Sbjct: 569 LAE--NKVKTLTGHSDWFGGITSLAFSPDGKTLISGSQDKTIKLWNLETSQEIKTLSGHS 626
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ V S +G +L S+ V ++ V GE +
Sbjct: 627 DHICSVAYS--PNGQILASASKDKTVKLWSVASGEEI 661
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 104/226 (46%), Gaps = 13/226 (5%)
Query: 131 KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS 190
K+ F + +V SV +S L ASGSDD +++WD + + +
Sbjct: 397 KLVFFSNLKGHENKVLSVAFSPDGRFL-ASGSDDTIIKLWDLATQQHRTFAGHGEYSWSR 455
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTA 250
+ ++F P G LV +G DK +DV ++ + F GH++ V + F + ++ +
Sbjct: 456 GINSLDFSPDGKFLV-SGSDDKTIKLWDVNLGIE-IFTFTGHQERVNAVSFSPLGKILAS 513
Query: 251 GT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
G+ D +KLW++ + + ++K H + + + ++ G LL + N + ++ E
Sbjct: 514 GSKDKTVKLWSLETGKEVYSFKSHTD--DVLSVTFSPDGKLLASSAGGNDKTIKILQLAE 571
Query: 310 PVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHV 355
+ + +T G ++S+ + G+ TL++G D + +
Sbjct: 572 ----NKVKTLTGHSDWFGGITSLAFSPDGK---TLISGSQDKTIKL 610
>gi|189053699|dbj|BAG35951.1| unnamed protein product [Homo sapiens]
Length = 522
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T +++ A V + DP D A+ ++I+++ S D PV + H
Sbjct: 266 LHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKIWSLDS---DEPVADIEGH 322
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+ +++ + W P SGR LG+ YD +DLE + I ++ H V+
Sbjct: 323 T----------VRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGH-SMGVY 369
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + + D L +G D ++WD R G+C+ ++ + + F P G +A
Sbjct: 370 DIAFHQ-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGYH-IA 423
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDS 264
G D +D+R+ V H+ VT ++F + + L+T D K+W
Sbjct: 424 TGSGDNTCKVWDLRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 482
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 483 SPLKTLAGHEG--KVMGLDISSDGQLIATCS 511
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D+ +D
Sbjct: 297 ASCAADGSVKIWS--LDSDEPVADIEGHTVR--VARVMWHPSGR-FLGTTCYDRSWRLWD 351
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 352 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 408
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 409 EIYGINFSPNGYHIATGSGDNTCKVWDLR 437
>gi|356546270|ref|XP_003541552.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Glycine max]
Length = 814
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV + + VL SG+ G +++WD + K V T+ + R VEFHPFG
Sbjct: 61 VESVTFDSAE-VLILSGASSGVIKLWD--LEEAKMVRTL--TGHRLNCTAVEFHPFG-EF 114
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
A+G D +D+RK + + GH + ++ I+F D +V+ G D +K+W++
Sbjct: 115 FASGSLDTNLNIWDIRKK-GCIQTYKGHSQGISTIKFSPDGRWVVSGGFDNVVKVWDLTG 173
Query: 264 SRVIRTYK---GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVT 320
+++ +K GH+ + +F L L+ GS V +D + FE +
Sbjct: 174 GKLLHDFKFHEGHIRSLDFHPLEF-----LMATGSADRTVKFWD--------LETFELIG 220
Query: 321 AAGSERGFVSSVCWRRVGEDECTLVAGGSDGL 352
+ E V S+ + G+ L AG D L
Sbjct: 221 STRHEVSGVRSIAFHPDGQ---ILFAGFEDSL 249
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVC-DYYICTPAKLSSLKWK 106
+EF P FA+G + + I++I+ K C Y +S++K+
Sbjct: 106 VEFHPFGEFFASGSLDTNLNIWDIR--------------KKGCIQTYKGHSQGISTIKFS 151
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P GR + SG +D VV +DL + + H G + S+D+ + L A+GS D T
Sbjct: 152 P--DGRWVVSGGFDNVVKVWDLTGGKLLHDFKFHEG-HIRSLDFHPLE-FLMATGSADRT 207
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
++ WD + + + + + S V + FHP G L A K Y+++
Sbjct: 208 VKFWD--LETFELIGSTRHEV--SGVRSIAFHPDGQILFAGFEDSLKVYSWE 255
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD 245
+A V C++ + L G D + + K ++ GH +V + F +
Sbjct: 12 AAHSGNVNCLKLGRKANRLFITGGDDHSVNLWMIGKPTS-LMSLCGHTSSVESVTFDSAE 70
Query: 246 TLVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
L+ +G + G +KLW++ +++++RT GH N + G GS + ++D
Sbjct: 71 VLILSGASSGVIKLWDLEEAKMVRTLTGH--RLNCTAVEFHPFGEFFASGSLDTNLNIWD 128
Query: 305 VR 306
+R
Sbjct: 129 IR 130
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L +G DD ++ +W GK S + S+V V F L+ +G +
Sbjct: 30 LFITGGDDHSVNLWMI----GKPTSLMSLCGHTSSVESVTFDS-AEVLILSGASSGVIKL 84
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVN 275
+D+ + V GHR T + F +G+ D L +W++ I+TYKGH
Sbjct: 85 WDLEE-AKMVRTLTGHRLNCTAVEFHPFGEFFASGSLDTNLNIWDIRKKGCIQTYKGHSQ 143
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
+ + S G + G N V V+D+ G+ +HDF+
Sbjct: 144 GISTIKFS--PDGRWVVSGGFDNVVKVWDLTGGK--LLHDFK 181
>gi|443696911|gb|ELT97519.1| hypothetical protein CAPTEDRAFT_227651 [Capitella teleta]
Length = 348
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 126/299 (42%), Gaps = 46/299 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHS-KVCDYYICTPAKLSSLKWK 106
I+F P + ++ G R I ++N+ + + + HS V D + T
Sbjct: 62 IKFSPDGQILSSAGFDRLIFLWNVYGECEN--LATMKGHSGAVMDLHYST---------- 109
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR-VWSVDYSKGDPVLGASGSDDG 165
G L S D V +DLE V R G R V S D ++ P + SGSDDG
Sbjct: 110 ---DGSKLVSCSSDHTVALWDLE--VAERMRKFKGHRSFVNSCDSARRGPHMICSGSDDG 164
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T++ WD R K V ++ S V V F+ ++A G D + +D+RK +
Sbjct: 165 TVKYWDAR----KKVP-LESFQSTYQVTAVSFNDTAEQIIAGGI-DNEIKIFDLRKN-EI 217
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKG--HVNNRN 278
+ GH TVT ++ D L+T D +++W+V R ++ ++G H +N
Sbjct: 218 LYRMRGHTDTVTGMKLSPDGSYLLTTSMDNTVRIWDVRPYAPQERCVKIFQGNQHTFEKN 277
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW-------------VHDFEPVTAAGS 324
+ ++ G + GS V+++D V+ H EP+ A+GS
Sbjct: 278 LLRVTWAPDGSKVAAGSGDRFVYIWDTTTRRIVYKLPGHAGSVNDVDFHPHEPIIASGS 336
>gi|328688459|gb|AEB35841.1| COP1 [Helianthus tuberosus]
Length = 82
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMW 170
+P + SGSDD +++W
Sbjct: 64 EPSMLVSGSDDCKVKIW 80
>gi|163848054|ref|YP_001636098.1| WD-40 repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
gi|222525943|ref|YP_002570414.1| WD-40 repeat-containing protein [Chloroflexus sp. Y-400-fl]
gi|163669343|gb|ABY35709.1| WD-40 repeat protein [Chloroflexus aurantiacus J-10-fl]
gi|222449822|gb|ACM54088.1| WD-40 repeat protein [Chloroflexus sp. Y-400-fl]
Length = 438
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 106/240 (44%), Gaps = 11/240 (4%)
Query: 75 LVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI 134
L P+ ++ + I + ++SL + P ++L G +DG + + L I
Sbjct: 132 LEQPPLSSLAVQRPLLRQMIAVQSWVNSLTFSPDR--QMLAIGSWDGAIRLWRLPDYQMI 189
Query: 135 FERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCC 194
+ G + ++D+S ++ A+G G +++W R + G+ + + A
Sbjct: 190 RVISGNIGE-INAIDFSPDSQLIAAAGRQHG-VRVW--RIEDGELLFHLGDEQRHGAFFS 245
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTD 253
V F P G + AG D Y +D + PV GH + + F D L +AG D
Sbjct: 246 VAFQPNGRFIATAGW-DPVVYLWDAQNG-QPVAELPGHEGLINSVTFSPDSSLLFSAGYD 303
Query: 254 GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV 313
+++W+V+ +++T +GH + ++V G LL +FV+ V G+P+ +
Sbjct: 304 RVIRVWDVDSRTLVQTLRGHSD--AIFSMTVSPDGRLLASAGSDGAIFVWRVADGQPLQI 361
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 26/264 (9%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIK-SVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
I I+F P + A G +R++ I+ L+ H + D + ++ S+
Sbjct: 199 INAIDFSPDSQLIAAAGRQHGVRVWRIEDGELLFH----LGDEQRHGAFF--------SV 246
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
++P +GR + + +D VV +D + P+ E H G + SV +S +L ++G D
Sbjct: 247 AFQP--NGRFIATAGWDPVVYLWDAQNGQPVAELPGHEG-LINSVTFSPDSSLLFSAGYD 303
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
+++WD D V T++ A+ + P G L +AG +D + + V
Sbjct: 304 R-VIRVWD--VDSRTLVQTLR--GHSDAIFSMTVSPDGRLLASAG-SDGAIFVWRVADG- 356
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
P+ + + F D L +A +++W+V+D + GH N + +
Sbjct: 357 QPLQILATPSGACFDVAFSPDGRYLASAHYGRIVRVWHVSDGGLRWELSGH--NESVTCV 414
Query: 283 SVWRHGGLLGCGSETNQVFVYDVR 306
+ G +L GS V ++ +
Sbjct: 415 AFTPDGDMLASGSYDATVRIWSFQ 438
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 53/148 (35%), Gaps = 37/148 (25%)
Query: 243 DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV----------------GLSVW- 285
D L DG ++LW + D ++IR G++ N + G+ VW
Sbjct: 165 DRQMLAIGSWDGAIRLWRLPDYQMIRVISGNIGEINAIDFSPDSQLIAAAGRQHGVRVWR 224
Query: 286 --------------RHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSERGF 328
RHG + N F+ W V++ D +PV G
Sbjct: 225 IEDGELLFHLGDEQRHGAFFSVAFQPNGRFIATAGWDPVVYLWDAQNGQPVAELPGHEGL 284
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLLHVF 356
++SV + D L + G D ++ V+
Sbjct: 285 INSVTF---SPDSSLLFSAGYDRVIRVW 309
>gi|359460519|ref|ZP_09249082.1| hypothetical protein ACCM5_17458 [Acaryochloris sp. CCMEE 5410]
Length = 344
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 29/267 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P + V AT I+++++ + K+ + + SLK+ P
Sbjct: 101 VDFSPDNKVLATCSSDDTIKLWDVNT-------------GKLLNTLEGHAGSIYSLKFNP 147
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG +D + + ++ + + + E V S+ +++ VL ASG GT+
Sbjct: 148 --DGKTLVSGSFDRTIKIWSVDGR--LIKTLEGHPAYVDSLAFTRDGQVL-ASGGSGGTI 202
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAA-GCADKKAYAYDVRKMVDPV 226
+ W+P+ G + TV+ + + F P G LVAA G + + + + ++ V
Sbjct: 203 KFWNPKTGG--LIRTVKRGPGLT--TGLSFDPGGRVLVAAKGTHEIEFWNANNGDLIRAV 258
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
V H+K V+ + F D D L T+ DG +KLW+ R+IRT H R +
Sbjct: 259 RV---HKKRVSNVEFSPDGDMLATSSWDGTIKLWDALRGRLIRTLSPH--TREVHSMQFS 313
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVW 312
G + GS V ++ V G+ V+
Sbjct: 314 PDGEYVVSGSHKGNVKIWRVNDGKEVY 340
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 13/134 (9%)
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
R+VW+V YS D L AS +DD T+++W + + + T+ +++ V V+F P +
Sbjct: 54 RQVWAVAYSS-DGKLIASTNDDTTVKIW--KVGEAEPIQTLLGHSAQ--VLGVDFSP-DN 107
Query: 203 SLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLW 259
++A +D +DV K+++ +GH ++ ++F D TLV+ D +K+W
Sbjct: 108 KVLATCSSDDTIKLWDVNTGKLLN---TLEGHAGSIYSLKFNPDGKTLVSGSFDRTIKIW 164
Query: 260 NVNDSRVIRTYKGH 273
+V D R+I+T +GH
Sbjct: 165 SV-DGRLIKTLEGH 177
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 18/171 (10%)
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL- 242
+PS R V V + G L+A+ D + V + +P+ GH V + F
Sbjct: 49 KPSQFRQ-VWAVAYSSDGK-LIASTNDDTTVKIWKVGE-AEPIQTLLGHSAQVLGVDFSP 105
Query: 243 DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFV 302
D L T +D +KLW+VN +++ T +GH + L G L GS +
Sbjct: 106 DNKVLATCSSDDTIKLWDVNTGKLLNTLEGHAG--SIYSLKFNPDGKTLVSGSFDRTI-- 161
Query: 303 YDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLL 353
+W D + +V S+ + R G+ L +GGS G +
Sbjct: 162 -------KIWSVDGRLIKTLEGHPAYVDSLAFTRDGQ---VLASGGSGGTI 202
>gi|328688409|gb|AEB35816.1| COP1 [Helianthus paradoxus]
gi|328688411|gb|AEB35817.1| COP1 [Helianthus paradoxus]
Length = 96
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 8 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 65
Query: 156 VLGASGSDDGTMQMW 170
+ SGSDD +++W
Sbjct: 66 SMLVSGSDDCKVKIW 80
>gi|328688535|gb|AEB35879.1| COP1 [Helianthus annuus]
gi|328688537|gb|AEB35880.1| COP1 [Helianthus annuus]
Length = 87
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 2 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 59
Query: 156 VLGASGSDDGTMQMWDPR 173
+ SGSDD +++W R
Sbjct: 60 SMLVSGSDDCKVKIWCTR 77
>gi|409079395|gb|EKM79756.1| hypothetical protein AGABI1DRAFT_127441 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 871
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 26/244 (10%)
Query: 40 AVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK 99
A SD + ++F P++ G + IYN+ D + +
Sbjct: 11 ARSDRVKGVDFHPTEPWLLAGLYNGSVNIYNL-------------DTGNIIKTFEVAEVP 57
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ +K+ + V GS DY V Y+ +KV FE R + P++
Sbjct: 58 VRCVKFIARKNWFVAGSDDYQLRVFNYNTHEKVVAFEAHPDYIR---CLTVHPSAPIV-L 113
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+GSDD T++ WD K +Q + + + F+P S+ + C D+ +
Sbjct: 114 TGSDDMTIKAWD----WDKQWRNIQTYEGHTHYIMNIAFNPKDSNTFVSACLDRTVKMWS 169
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ P + H K V Y+ F D LVT G D +K+W+ ++T +GH N
Sbjct: 170 L-GASSPNFTMEAHDKGVNYVDFYPGADKPYLVTTGDDKTVKVWDYLSKSCVQTMEGHTN 228
Query: 276 NRNF 279
N +F
Sbjct: 229 NVSF 232
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 114 LGSGDYDGVVMEYDLE--KKVPIFERDE-------HGGRRVWSVDYSKGDPVLGASGSDD 164
L +G Y+G V Y+L+ + FE E R+ W V +GSDD
Sbjct: 28 LLAGLYNGSVNIYNLDTGNIIKTFEVAEVPVRCVKFIARKNWFV-----------AGSDD 76
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++++ P R C+ HP + +V G D A+D K
Sbjct: 77 YQLRVFNYNTHEKVVAFEAHPDYIR----CLTVHP-SAPIVLTGSDDMTIKAWDWDKQWR 131
Query: 225 PVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ ++GH + I F D +T V+A D +K+W++ S T + H N+V
Sbjct: 132 NIQTYEGHTHYIMNIAFNPKDSNTFVSACLDRTVKMWSLGASSPNFTMEAHDKGVNYV 189
>gi|407925152|gb|EKG18171.1| hypothetical protein MPH_04560 [Macrophomina phaseolina MS6]
Length = 357
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 129/312 (41%), Gaps = 41/312 (13%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
FDP+ A+G + R I ++ + +Y I + K + L
Sbjct: 72 FDPTGQHIASGSMDRNILLWRT--------------YGHCENYGILSGHKGAVLDLHWSR 117
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSKGDPVLGASGSDDGTMQ 168
RV+ S D + +DLE I R G V + +D SK + SGSDDG +
Sbjct: 118 DSRVIFSASADMTLASWDLETGQRI--RRHVGHEEVINCMDVSKRGEEMLVSGSDDGYIG 175
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WDPR + V ++ +A+ E G+ L + G D +D+RK +
Sbjct: 176 IWDPRQK--EAVDYIETEFPVTAIALAE---AGNELYSGGI-DNDIKVWDMRKKAVAYSL 229
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVN--NRNFVG 281
GH T+T ++ D TL++ D ++ W++ R ++TY G +N +
Sbjct: 230 L-GHTDTITSLQVSPDSQTLLSNSHDSTVRTWDIRPFAPTDRHVKTYDGAPTGMEKNLLK 288
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDE 341
S G + GS V V+D G+ ++ +G V+ V R DE
Sbjct: 289 ASWDPKGQKIAAGSGDRTVVVWDANTGKLLY--------KLPGHKGAVNDV--RFSPRDE 338
Query: 342 CTLVAGGSDGLL 353
+V+G SDG+L
Sbjct: 339 PIIVSGSSDGML 350
>gi|358254064|dbj|GAA54098.1| katanin p80 WD40-containing subunit B1 [Clonorchis sinensis]
Length = 738
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 23/219 (10%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRV+ +G D V + + K I H V + ++S+ + + A GS G++++
Sbjct: 26 SGRVMATGGEDRRVKLWAVGKPACILSLTGHTSS-VEATEFSQEEDRVAA-GSLSGSIRI 83
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V + S SAV ++FHPFG+ V +G D +DV + + +
Sbjct: 84 WD--LEEVKIVRAL--SGHTSAVSSLDFHPFGN-FVVSGSIDTFVKLWDVSRK-GCINTY 137
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V RF D +V+AG DG +KLW+++ R++ GH + V H
Sbjct: 138 RGHSGGVNMARFSPDGKWVVSAGEDGMIKLWDLSAGRLLAELTGHTGSVTAVAF----HP 193
Query: 289 G--LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL S V ++D + +F V +G+E
Sbjct: 194 TVLLLATASTDRTVRLFD--------LENFSQVAVSGTE 224
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+ S+ EF + A G ++ IRI++++ V + V A+ H+ + +S
Sbjct: 57 TSSVEATEFSQEEDRVAAGSLSGSIRIWDLEEVKI---VRALSGHT----------SAVS 103
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP--VLGA 159
SL + P G + SG D V +D+ +K I H G V+ ++ P
Sbjct: 104 SLDFHPF--GNFVVSGSIDTFVKLWDVSRKGCINTYRGHSG----GVNMARFSPDGKWVV 157
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S +DG +++WD G+ ++ + + +V V FHP L+A D+ +D+
Sbjct: 158 SAGEDGMIKLWD--LSAGRLLAEL--TGHTGSVTAVAFHP-TVLLLATASTDRTVRLFDL 212
>gi|328688425|gb|AEB35824.1| COP1 [Helianthus exilis]
gi|328688427|gb|AEB35825.1| COP1 [Helianthus exilis]
Length = 96
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 94 ICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKG 153
I T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+
Sbjct: 6 IPTRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVTEYEEHE-KRVWSVDFSRI 63
Query: 154 DPVLGASGSDDGTMQMWDPR 173
+P + SGSDD +++W R
Sbjct: 64 EPSMLVSGSDDCKVKIWCTR 83
>gi|434400469|ref|YP_007134473.1| WD-40 repeat-containing protein [Stanieria cyanosphaera PCC 7437]
gi|428271566|gb|AFZ37507.1| WD-40 repeat-containing protein [Stanieria cyanosphaera PCC 7437]
Length = 1756
Score = 62.0 bits (149), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 7/176 (3%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
++G++L SG D V + L R G + D L ASGS D T++
Sbjct: 1535 SNGQLLVSGSEDRTVKIWQLNNDQAEILRTLKGHQDSVKTVAISPDNKLIASGSYDKTIK 1594
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+W+ GK + T+ S A+ ++F G L+A+G D + +++ +
Sbjct: 1595 IWNVE---GKLLKTL--SGHNLAISSLKFSKDGK-LLASGSWDNTIRLWQIKEQNSSSQI 1648
Query: 229 FDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
GH+ +T + F+D D L ++ DG +KLW++ ++ +++T +GH + N + +S
Sbjct: 1649 LSGHQDGITGLDFIDRDDILASSSADGTIKLWDLTNNSLLKTLQGHSSQINSLAIS 1704
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 120/272 (44%), Gaps = 32/272 (11%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYN----IKSVLVDHPVVAVVDHSKVCDYYICTPA 98
+ + + F P + + AT +I I+N ++ VLV H ++ D +P
Sbjct: 1350 EQVNSVAFTPDNQLIATATADGRINIWNKDGILQQVLVGH-------RGEITDLNF-SPI 1401
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
+++ K + T +L S D V + + E GG ++SV S P +
Sbjct: 1402 EINGNKNQ--TQSYLLASASVDKTVKIWQINN----LSASEAGG--IYSVAISPTFPEIY 1453
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A+ DG +Q+W D K + P ++ + ++F P G L +A DK +
Sbjct: 1454 AAAGWDGKIQLWQKYPDQTKELLRTLP-GHQTTISDLKFSPDGKVLASASW-DKTIKLW- 1510
Query: 219 VRKMVDPVLV--FDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND--SRVIRTYKGH 273
++ D L+ GH+ V I F L+ +G+ D +K+W +N+ + ++RT KGH
Sbjct: 1511 --RVTDGSLLTTLQGHQDGVNSIAFSSNGQLLVSGSEDRTVKIWQLNNDQAEILRTLKGH 1568
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
++ V +S L+ GS + +++V
Sbjct: 1569 QDSVKTVAIS--PDNKLIASGSYDKTIKIWNV 1598
Score = 44.3 bits (103), Expect = 0.096, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 9/183 (4%)
Query: 131 KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRS 190
K+ + ++ G + S + D + AS S DGT+++W + + + + T+ + +
Sbjct: 1168 KINLSNLNQEGTTSLVSDENLSQDNYVLASASADGTVRLWRIQNNQIEPLKTL--TGHQD 1225
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTA 250
V V F P + ++A+ DK + + + + GH V I F + L +
Sbjct: 1226 WVTDVAFSP-DNQIIASASRDKTIKLWQLDGTL--ITTLSGHNGWVNTIDFASDNLLASG 1282
Query: 251 GTDGCLKLWNVND--SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
G D +KLW +N+ S+ IRT G+ + V S G L S +V ++ V+ G
Sbjct: 1283 GEDNQIKLWEINNQTSKEIRTITGNQDRVTQVKFSA--DGNELISASGDGEVKLWQVKDG 1340
Query: 309 EPV 311
+ +
Sbjct: 1341 KQI 1343
Score = 42.7 bits (99), Expect = 0.27, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 23/132 (17%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
DS+ + P + + A+G + I+I+N++ L+ + H+ +SS
Sbjct: 1570 DSVKTVAISPDNKLIASGSYDKTIKIWNVEGKLLK----TLSGHN----------LAISS 1615
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKK---VPIFERDEHGGRRVWSVDYSKGDPVLGA 159
LK+ G++L SG +D + + ++++ I + G + +D+ D +L A
Sbjct: 1616 LKFS--KDGKLLASGSWDNTIRLWQIKEQNSSSQILSGHQDG---ITGLDFIDRDDIL-A 1669
Query: 160 SGSDDGTMQMWD 171
S S DGT+++WD
Sbjct: 1670 SSSADGTIKLWD 1681
>gi|391347054|ref|XP_003747780.1| PREDICTED: katanin p80 WD40-containing subunit B1-like [Metaseiulus
occidentalis]
Length = 835
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGS+ G ++++D + + + T+ + +++V C++FHP+G +A+G D
Sbjct: 75 LLASGSNSGAVKLFD--LEAARVLRTL--NGHKASVQCIDFHPYGE-FIASGSCDNSIKL 129
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+D R+ + + GH + V IRF D +V+ G DG +KLW++ +++ + H
Sbjct: 130 WDSRRR-SCINTYRGHEQKVNSIRFSPDGRWIVSGGDDGSIKLWDLAMGKMLTQFNEHQA 188
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+ V + LL GSE V YD+
Sbjct: 189 PVSDVEFHPNEY--LLASGSEDGSVKFYDL 216
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVT 249
+ V C+ +VA DKK + + + + VL GH + ++F + L+
Sbjct: 19 AVVNCISIGRKSGKVVATAGDDKKINLWTIPRY-NCVLRLHGHTTPIDTVKFHPNEDLLA 77
Query: 250 AGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+G++ G +KL+++ +RV+RT GH + + + G + GS N + ++D R
Sbjct: 78 SGSNSGAVKLFDLEAARVLRTLNGHKASVQCIDFHPY--GEFIASGSCDNSIKLWDSRRR 135
Query: 309 EPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ + RG V R D +V+GG DG + ++
Sbjct: 136 -----------SCINTYRGHEQKVNSIRFSPDGRWIVSGGDDGSIKLW 172
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I ++F P++ + A+G + ++++++++ V+ ++ K A + +
Sbjct: 64 IDTVKFHPNEDLLASGSNSGAVKLFDLEAAR----VLRTLNGHK---------ASVQCID 110
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G + SG D + +D ++ I H ++V S+ +S D SG DD
Sbjct: 111 FHP--YGEFIASGSCDNSIKLWDSRRRSCINTYRGH-EQKVNSIRFSP-DGRWIVSGGDD 166
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
G++++WD GK ++ Q + ++ V VEFHP L+A+G D YD+ +
Sbjct: 167 GSIKLWD--LAMGKMLT--QFNEHQAPVSDVEFHP-NEYLLASGSEDGSVKFYDLETW-N 220
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
+ G V RF ++ G D ++++
Sbjct: 221 LISSTSGDSGQVHCTRFHPDGDVIMVGADDLMRVY 255
>gi|403508075|ref|YP_006639713.1| phosphotransferase enzyme family protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402803300|gb|AFR10710.1| phosphotransferase enzyme family protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 679
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 107/251 (42%), Gaps = 33/251 (13%)
Query: 120 DGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKC 179
D E ++E VPI E D+H V++ D GD V A+ DGT ++WD + G+
Sbjct: 379 DTAAEEAEVEGPVPIGEHDDHVNTVVFNSD---GDTV--ATAGSDGTARLWD--VETGEL 431
Query: 180 VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI 239
++T P + V V F P + VA+ +D A +D+ + GH V +
Sbjct: 432 IAT--PKSFDGHVWSVAFSP-DDATVASVHSDGTAQLWDID--TEEPTPLPGHTGYVRSV 486
Query: 240 RF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL-LGCGSET 297
F D T+ TA D +LWN + T GH + N V V+ GG L S+
Sbjct: 487 AFGPDGSTVATASDDRTTRLWNGRTGEFVDTLDGHTDTVNSV---VFGPGGSDLATASKD 543
Query: 298 NQVFVYDVRWGEP----------VWVHDFEP---VTAAGSERGFVSSVCWRRVGEDECTL 344
++D+ GEP VW F P A SE G ++ W G E +
Sbjct: 544 GTARIWDIETGEPHATLDEHDDSVWSVAFSPEGAFVATASEDG--TARIW-NAGTGEPRI 600
Query: 345 VAGGSDGLLHV 355
V G DG ++
Sbjct: 601 VLDGHDGPVNT 611
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 86/231 (37%), Gaps = 36/231 (15%)
Query: 141 GGRRVWSVDYSKGDPVLG-----------------ASGSDDGTMQMWDPRCDGGKCVSTV 183
G ++W +D + P+ G A+ SDD T ++W+ R G+ V T+
Sbjct: 461 GTAQLWDIDTEEPTPLPGHTGYVRSVAFGPDGSTVATASDDRTTRLWNGRT--GEFVDTL 518
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLD 243
V V F P GS L A D A +D+ + +P D H +V + F
Sbjct: 519 D--GHTDTVNSVVFGPGGSDLATA-SKDGTARIWDI-ETGEPHATLDEHDDSVWSVAFSP 574
Query: 244 VDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFV 302
V TA DG ++WN GH N V S G LL G E+ +
Sbjct: 575 EGAFVATASEDGTARIWNAGTGEPRIVLDGHDGPVNTVAFSP--DGTLLATGDESGAARL 632
Query: 303 YDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLL 353
+D GE V T G V SV + D TL DG +
Sbjct: 633 WDAETGEAV-------TTLEGEHTDAVWSVAF---SPDGATLATASDDGTV 673
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 25/216 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P S AT R R++N ++ + D ++S+ + P
Sbjct: 486 VAFGPDGSTVATASDDRTTRLWNGRT-------------GEFVDTLDGHTDTVNSVVFGP 532
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G G L + DG +D+E P DEH VWSV +S + A+ S+DGT
Sbjct: 533 G--GSDLATASKDGTARIWDIETGEPHATLDEHD-DSVWSVAFSP-EGAFVATASEDGTA 588
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ G + V V F P G+ L+A G A +D + + V
Sbjct: 589 RIWN----AGTGEPRIVLDGHDGPVNTVAFSPDGT-LLATGDESGAARLWDA-ETGEAVT 642
Query: 228 VFDG-HRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV 261
+G H V + F D TL TA DG + LW +
Sbjct: 643 TLEGEHTDAVWSVAFSPDGATLATASDDGTVLLWEI 678
>gi|328688401|gb|AEB35812.1| COP1 [Helianthus paradoxus]
gi|328688403|gb|AEB35813.1| COP1 [Helianthus paradoxus]
Length = 92
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 8 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 65
Query: 156 VLGASGSDDGTMQMW 170
+ SGSDD +++W
Sbjct: 66 SMLVSGSDDCKVKIW 80
>gi|330801038|ref|XP_003288538.1| hypothetical protein DICPUDRAFT_152778 [Dictyostelium purpureum]
gi|325081441|gb|EGC34957.1| hypothetical protein DICPUDRAFT_152778 [Dictyostelium purpureum]
Length = 358
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 41/296 (13%)
Query: 49 EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPG 108
+F+ + A+GG ++I ++N+ + + +Y + K + L+
Sbjct: 72 KFNSYGTALASGGFDKEIFLWNV--------------YGECINYSVLKGHKGTILELHWS 117
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
T + S D + +D K I EH V S ++ P L ASGSDDGT +
Sbjct: 118 TDSNEIYSACTDKSIGVWDANKGELIKRIREHTAV-VNSCYPARRGPPLVASGSDDGTAR 176
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
++D R G T++ ++VC F L++ G D +D+R +P++
Sbjct: 177 VFDTRSKG--STHTLKHKYPITSVC---FSDASDQLISGGL-DNIIRIWDLRNDEEPLIT 230
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVG 281
+GH+ T++ + D L++ D L+ W++ +R I+T+ G NN +N +
Sbjct: 231 MNGHQDTISGMSVSKDGAYLLSNSMDNTLRQWDIRPYAPQNRNIKTFIGAQNNFEKNLIK 290
Query: 282 LSVWRHGGLLGCGSETNQVFVYD-----VRWGEP--------VWVHDFEPVTAAGS 324
S + GS QV+++D +++ P V H EP+ A+ S
Sbjct: 291 CSFSPDSRRVATGSSDRQVYIWDSNTTKIQYCLPGHNGTVNEVAFHPNEPIIASAS 346
>gi|328688547|gb|AEB35885.1| COP1 [Helianthus annuus]
gi|328688549|gb|AEB35886.1| COP1 [Helianthus annuus]
gi|328688551|gb|AEB35887.1| COP1 [Helianthus annuus]
gi|328688553|gb|AEB35888.1| COP1 [Helianthus annuus]
Length = 82
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 2 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 59
Query: 156 VLGASGSDDGTMQMWDPR 173
+ SGSDD +++W R
Sbjct: 60 SMLVSGSDDCKVKIWCTR 77
>gi|403302100|ref|XP_003941702.1| PREDICTED: WD repeat-containing protein 5B [Saimiri boliviensis
boliviensis]
Length = 365
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 79 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL--- 133
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 134 --VSASDDKTLKLWDAR--SGKCLKTLEGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 186
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 187 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 246
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + ++TA D LKLW+ R ++TY GH N + F SV G +
Sbjct: 247 PVSFVKFSPNGKYILTATLDNTLKLWDYTRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 305
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 306 VSGSEDNLVYIWNLQTKEIV 325
>gi|426192666|gb|EKV42602.1| hypothetical protein AGABI2DRAFT_188715 [Agaricus bisporus var.
bisporus H97]
Length = 872
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 26/244 (10%)
Query: 40 AVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK 99
A SD + ++F P++ G + IYN+ D + +
Sbjct: 11 ARSDRVKGVDFHPTEPWLLAGLYNGSVNIYNL-------------DTGNIIKTFEVAEVP 57
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ +K+ + V GS DY V Y+ +KV FE R + P++
Sbjct: 58 VRCVKFIARKNWFVAGSDDYQLRVFNYNTHEKVVAFEAHPDYIR---CLTVHPSAPIV-L 113
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRS-AVCCVEFHPFGSSLVAAGCADKKAYAYD 218
+GSDD T++ WD K +Q + + + F+P S+ + C D+ +
Sbjct: 114 TGSDDMTIKAWD----WDKQWRNIQTYEGHTHYIMNIAFNPKDSNTFVSACLDRTVKMWS 169
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ P + H K V Y+ F D LVT G D +K+W+ ++T +GH N
Sbjct: 170 L-GASSPNFTMEAHDKGVNYVDFYPGADKPYLVTTGDDKTVKVWDYLSKSCVQTMEGHTN 228
Query: 276 NRNF 279
N +F
Sbjct: 229 NVSF 232
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 27/178 (15%)
Query: 114 LGSGDYDGVVMEYDLE--KKVPIFERDE-------HGGRRVWSVDYSKGDPVLGASGSDD 164
L +G Y+G V Y+L+ + FE E R+ W V +GSDD
Sbjct: 28 LLAGLYNGSVNIYNLDTGNIIKTFEVAEVPVRCVKFIARKNWFV-----------AGSDD 76
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++++ P R C+ HP + +V G D A+D K
Sbjct: 77 YQLRVFNYNTHEKVVAFEAHPDYIR----CLTVHP-SAPIVLTGSDDMTIKAWDWDKQWR 131
Query: 225 PVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ ++GH + I F D +T V+A D +K+W++ S T + H N+V
Sbjct: 132 NIQTYEGHTHYIMNIAFNPKDSNTFVSACLDRTVKMWSLGASSPNFTMEAHDKGVNYV 189
>gi|398010821|ref|XP_003858607.1| hypothetical protein, conserved [Leishmania donovani]
gi|322496816|emb|CBZ31886.1| hypothetical protein, conserved [Leishmania donovani]
Length = 1403
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 39/264 (14%)
Query: 58 ATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRV--LG 115
ATGG+ IR++N++++ + + P + S+ W P + LG
Sbjct: 461 ATGGVDGMIRVWNLRTLSQQYSIPV-------------GPVMVHSVDWSPNGKHLIAALG 507
Query: 116 SGDYDGVVMEYDLEK-KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRC 174
SG+ + E + P+F V+ V ++ GD L A+ S G +
Sbjct: 508 SGEVVMYSTSTNRESWRTPVFSE------LVYRVCWAAGDSSLIAATSRSGVAVL---SS 558
Query: 175 DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD-PVLVFDGHR 233
GK V + A+R A V+ P S ++AAG D + Y Y++ + PV V GH
Sbjct: 559 KDGKVVR--RYPATRGAFYGVDIEPAKSKMIAAGSHDHRIYVYNLSSSSEHPVHVLAGHT 616
Query: 234 KTVTYIRF--LDVDTLVTAGTDGCLKLWNV--NDSRVI----RTYKGHVNN-RNFVGLSV 284
V + + ++ L++ DG L++W++ ND+ I R KGH + R+ S+
Sbjct: 617 DAVCDVAYNPTALNYLLSGSYDGTLRVWDLSSNDAHTISVSSRALKGHADRVRSVAWCSL 676
Query: 285 WRHGGLLGCGSETNQVFVYDVRWG 308
+ L+ GS + ++D+R G
Sbjct: 677 APY--LVISGSADASIRLWDIRNG 698
>gi|146077925|ref|XP_001463381.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134067466|emb|CAM65741.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 1403
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 39/264 (14%)
Query: 58 ATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRV--LG 115
ATGG+ IR++N++++ + + P + S+ W P + LG
Sbjct: 461 ATGGVDGMIRVWNLRTLSQQYSIPV-------------GPVMVHSVDWSPNGKHLIAALG 507
Query: 116 SGDYDGVVMEYDLEK-KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRC 174
SG+ + E + P+F V+ V ++ GD L A+ S G +
Sbjct: 508 SGEVVMYSTSTNRESWRTPVFSE------LVYRVCWAAGDSSLIAATSRSGVAVL---SS 558
Query: 175 DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD-PVLVFDGHR 233
GK V + A+R A V+ P S ++AAG D + Y Y++ + PV V GH
Sbjct: 559 KDGKVVR--RYPATRGAFYGVDIEPAKSKMIAAGSHDHRIYVYNLSSSSEHPVHVLAGHT 616
Query: 234 KTVTYIRF--LDVDTLVTAGTDGCLKLWNV--NDSRVI----RTYKGHVNN-RNFVGLSV 284
V + + ++ L++ DG L++W++ ND+ I R KGH + R+ S+
Sbjct: 617 DAVCDVAYNPTALNYLLSGSYDGTLRVWDLSSNDAHTISVSSRALKGHADRVRSVAWCSL 676
Query: 285 WRHGGLLGCGSETNQVFVYDVRWG 308
+ L+ GS + ++D+R G
Sbjct: 677 APY--LVISGSADASIRLWDIRNG 698
>gi|328688413|gb|AEB35818.1| COP1 [Helianthus paradoxus]
gi|328688415|gb|AEB35819.1| COP1 [Helianthus paradoxus]
Length = 87
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 4 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 61
Query: 156 VLGASGSDDGTMQMW 170
+ SGSDD +++W
Sbjct: 62 SMLVSGSDDCKVKIW 76
>gi|300864774|ref|ZP_07109624.1| hypothetical protein OSCI_1090002 [Oscillatoria sp. PCC 6506]
gi|300337178|emb|CBN54772.1| hypothetical protein OSCI_1090002 [Oscillatoria sp. PCC 6506]
Length = 309
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 124/304 (40%), Gaps = 44/304 (14%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A ++N++ WD L+T S+ +P + S + F P A+G I ++++
Sbjct: 35 ASSSNDKTVKLWD--LKTGQESTLNPEPDLVFSFYPLAFSPDSQTLASGS-DELIDLWDV 91
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
S ++ D + S+ P G +L +G DG + +DL
Sbjct: 92 AS-------------NQKLDIKSGFSVPVCSITLSP--DGEILVAGSSDGTIGLWDLTNC 136
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS--- 188
P + H VWSV +S L ASGS DGT+ +WD VST +P A+
Sbjct: 137 KPFTTLNAHS-YPVWSVAFSPDGKTL-ASGSGDGTIGLWD--------VSTNKPLATLLG 186
Query: 189 -RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DT 246
V V F P G+ L+A+ DK + + D + GH +V + F DT
Sbjct: 187 HSYPVWSVAFSPDGT-LLASSSGDKTIKIWQLSMGRDFAALI-GHSDSVESLAFSPQGDT 244
Query: 247 LVTAGTDGCLKLWNVNDSRVI-------RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQ 299
LV+ DG + LW ++ + RT H N+ V S G + GS
Sbjct: 245 LVSGSIDGTVMLWQLSKDLEVGVKISPDRTLTDHSNSVRSVAFS--PDGNTIASGSNDAT 302
Query: 300 VFVY 303
+ ++
Sbjct: 303 IKIW 306
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 81/199 (40%), Gaps = 21/199 (10%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGSD+ + +WD + + S VC + P G LVA G +D +D
Sbjct: 79 ASGSDE-LIDLWDVASNQKLDIK----SGFSVPVCSITLSPDGEILVA-GSSDGTIGLWD 132
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ P + H V + F D TL + DG + LW+V+ ++ + T GH
Sbjct: 133 LTN-CKPFTTLNAHSYPVWSVAFSPDGKTLASGSGDGTIGLWDVSTNKPLATLLGHSYPV 191
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
V S G LL S + ++ + G DF + V S+ +
Sbjct: 192 WSVAFS--PDGTLLASSSGDKTIKIWQLSMG-----RDFAALIGHSDS---VESLAFSPQ 241
Query: 338 GEDECTLVAGGSDGLLHVF 356
G+ TLV+G DG + ++
Sbjct: 242 GD---TLVSGSIDGTVMLW 257
>gi|47216991|emb|CAG04933.1| unnamed protein product [Tetraodon nigroviridis]
Length = 506
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 116/271 (42%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
+RT +++ A V I PSD A+ +++++++S D PV + H
Sbjct: 250 IRTLRGHNTNVGAVVFRPQAGISLHPSDVNLASCAADGSVKLWSLES---DEPVADIEGH 306
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
++ ++S + W P SGR LG+ YD +DLE + I ++ H + V
Sbjct: 307 TE----------RVSRVTWHP--SGRFLGTTCYDNSWRLWDLEVQEEILHQEGH-SKGVH 353
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + D L A+G D ++WD R G+CV ++ + V F P G L A
Sbjct: 354 DIHFHP-DGSLAATGGLDSFGRVWDLRT--GRCVVFLE--GHLKELYSVNFSPNGYHL-A 407
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT--LVTAGTDGCLKLWNVNDS 264
G D +++R + H+ ++ +RF D L+T D K+W+
Sbjct: 408 TGSGDNSCKVWELRNR-KCLYTIPSHQNLISAVRFQPTDGHFLLTGAYDNTAKVWSHPGW 466
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +G+ V G L+ S
Sbjct: 467 TPLKTLAGHEG--KVMGVDVSPDGKLIATSS 495
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D +D
Sbjct: 281 ASCAADGSVKLWSLESD--EPVADIEGHTER--VSRVTWHPSGR-FLGTTCYDNSWRLWD 335
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ ++ + +L +GH K V I F D T G D ++W++ R + +GH+
Sbjct: 336 L-EVQEEILHQEGHSKGVHDIHFHPDGSLAATGGLDSFGRVWDLRTGRCVVFLEGHLKEL 394
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
V S +G L GS N V+++R
Sbjct: 395 YSVNFSP--NGYHLATGSGDNSCKVWELR 421
>gi|328688393|gb|AEB35808.1| COP1 [Helianthus paradoxus]
gi|328688395|gb|AEB35809.1| COP1 [Helianthus paradoxus]
gi|328688397|gb|AEB35810.1| COP1 [Helianthus paradoxus]
gi|328688399|gb|AEB35811.1| COP1 [Helianthus paradoxus]
Length = 95
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
T +KLS L W T + S DY+G V +D+ + + E +EH +RVWSVD+S+ +P
Sbjct: 8 TRSKLSCLSWNKHTKNHI-ASSDYEGTVFVWDVNTQQSVMEYEEHE-KRVWSVDFSRIEP 65
Query: 156 VLGASGSDDGTMQMW 170
+ SGSDD +++W
Sbjct: 66 SMLVSGSDDCKVKIW 80
>gi|393229430|gb|EJD37053.1| WD40 repeat-like protein [Auricularia delicata TFB-10046 SS5]
Length = 500
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 132/317 (41%), Gaps = 33/317 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYICTPAKL 100
SD + + PS A+G IRI++ ++ V P+ D +
Sbjct: 211 SDWVRSVAVSPSGQHIASGSFDETIRIWDAQTGEAVGAPLTGHTDF-------------V 257
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
S+ G + S D + +D + PI + V S+ YS D V S
Sbjct: 258 YSVVVAVSPDGCQICSASDDNTICRWDAQSGAPIGKPMTGHSGEVNSIAYSP-DGVRIVS 316
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
G DD T+++WD G+ V V CV F P G + +A+G D +D
Sbjct: 317 GGDDCTVRLWDAST--GEAVG-FPLEGHTEWVWCVAFSP-GGACIASGSQDSTICLWDSV 372
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ +GH + V + F D LV+ D +++WN++ ++ RT +GH + N
Sbjct: 373 TGAH-LGTLEGHTERVCSVSFFPDRIHLVSGSWDETVRIWNISTRQLERTLRGHSSWVNS 431
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
V +S G + GSE + ++D + GE V P+T G V SV + G
Sbjct: 432 VAIS--PSGRFIASGSEDKTIRIWDAQSGEAV----GAPLTG---HTGIVLSVAFSPDGR 482
Query: 340 DECTLVAGGSDGLLHVF 356
++V+G +G + V+
Sbjct: 483 ---SIVSGSYNGTVRVW 496
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 9/202 (4%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR + S DG + +D E PI + V V YS D SG+ D T+++W
Sbjct: 53 GRHICSAGDDGPIRRWDAESGAPIGKPMTGHSDDVNCVAYSL-DGTRIVSGAIDRTVRLW 111
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+ + V AV CV F P G+ +A+G DK +D R + +
Sbjct: 112 DAST--GEALG-VPLEGHTHAVWCVAFSPDGA-CIASGSQDKTIRLWD-RATGAHLATLE 166
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F + LV+ D +++WNV + RT +GH + V +S G
Sbjct: 167 GHSGPVYSLCFSPNGIRLVSGSYDNTVRMWNVATRQPERTLRGHSDWVRSVAVS--PSGQ 224
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
+ GS + ++D + GE V
Sbjct: 225 HIASGSFDETIRIWDAQTGEAV 246
>gi|269124685|ref|YP_003298055.1| serine/threonine protein kinase with WD40 repeats [Thermomonospora
curvata DSM 43183]
gi|268309643|gb|ACY96017.1| serine/threonine protein kinase with WD40 repeats [Thermomonospora
curvata DSM 43183]
Length = 740
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 24/237 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + AT R++N K+ PV + H ++ S+ + P
Sbjct: 422 VAFSPDGATLATASWDGTARLWNAKN---GKPVATLEGHR----------GEVISVAFSP 468
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G L +G DG ++ + I H + + SV +S L A+ S D T+
Sbjct: 469 --DGATLATGSGDGTARLWNAKNGELIITLKGHQ-KAIGSVVFSPDGATL-ATASWDNTV 524
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ R + ++ ++ + V V F P G+ L+A +D A + VR + +
Sbjct: 525 RLWNARSS--ELITALK--GHKEVVQSVAFSPDGA-LLATASSDDTARLWRVRSG-ELIT 578
Query: 228 VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
GHR TV + F D TL TA DG +LW D +I KGH + V S
Sbjct: 579 ALKGHRSTVASVVFSPDGATLATASRDGTARLWRAKDGELITVLKGHQDQVTSVAFS 635
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 103/262 (39%), Gaps = 25/262 (9%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
+IG + F P + AT +R++N +S + + A+ H +V +P
Sbjct: 502 AIGSVVFSPDGATLATASWDNTVRLWNARSSEL---ITALKGHKEVVQSVAFSP------ 552
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
G +L + D + + I H V SV +S L A+ S
Sbjct: 553 ------DGALLATASSDDTARLWRVRSGELITALKGHRST-VASVVFSPDGATL-ATASR 604
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
DGT ++W R G+ ++ ++ + V V F P G++L AG D A + V K
Sbjct: 605 DGTARLW--RAKDGELITVLK--GHQDQVTSVAFSPDGAALATAGW-DGTARLWRV-KDG 658
Query: 224 DPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ + + H + + D L TA G +LWN + +I T +GH V S
Sbjct: 659 EFIAILANHPEVWSVAFSPDGALLATANNKGIARLWNARNGELITTLEGHHGGIGSVAFS 718
Query: 284 VWRHGGLLGCGSETNQVFVYDV 305
G LL S ++ V
Sbjct: 719 P--DGALLATASRDGTAKLWRV 738
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 28/249 (11%)
Query: 19 ARCEWDFNLRTTVSSSSSPNAAVSDSIGVIE---FDPSDSVFATGGIARKIRIYNIKSVL 75
A WD +R + SS A+ V++ F P ++ AT R++ ++S
Sbjct: 516 ATASWDNTVRLWNARSSELITALKGHKEVVQSVAFSPDGALLATASSDDTARLWRVRSGE 575
Query: 76 VDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF 135
+ + A+ H + +P G L + DG + + I
Sbjct: 576 L---ITALKGHRSTVASVVFSP------------DGATLATASRDGTARLWRAKDGELIT 620
Query: 136 ERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCV 195
H + V SV +S L +G D GT ++W R G+ ++ + A+ V V
Sbjct: 621 VLKGHQDQ-VTSVAFSPDGAALATAGWD-GTARLW--RVKDGEFIAIL---ANHPEVWSV 673
Query: 196 EFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDG 254
F P G+ L+A A ++ R + + +GH + + F D L TA DG
Sbjct: 674 AFSPDGA-LLATANNKGIARLWNARNG-ELITTLEGHHGGIGSVAFSPDGALLATASRDG 731
Query: 255 CLKLWNVND 263
KLW V D
Sbjct: 732 TAKLWRVGD 740
>gi|427708458|ref|YP_007050835.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7107]
gi|427360963|gb|AFY43685.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7107]
Length = 1172
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 34/280 (12%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD N T+ + AAV I F + A+G + IR+++I + +
Sbjct: 918 WDINTGQTLQTLQEHRAAVQS----IAFSFDGQMLASGSDDQTIRLWDINT---GQTLQT 970
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
+ H+ A + S+ + P R L SG +D V +D+ K +R G
Sbjct: 971 LQGHN----------AAVQSVAFNP--QYRTLASGSWDQTVKLWDV--KTGECKRTLKGH 1016
Query: 143 RR-VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG 201
VWS+ +S +L AS S DGT+++W+ + G CV T + A+ S V V F G
Sbjct: 1017 TNWVWSIAFSPNGELL-ASASYDGTIRLWN--INSGVCVQTFEVCAN-SIVKAVIFSQDG 1072
Query: 202 SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN 260
++A+ D +DV + GH V I F D TL ++G D +KLW+
Sbjct: 1073 Q-ILASSSPDYTIKLWDV-DTGECQSTLCGHSAWVWSIAFSPDNLTLASSGADETIKLWD 1130
Query: 261 VNDSRVIRTYKGH-----VNNRNFVGLSVWRHGGLLGCGS 295
+N + ++T K +N R GL+ L G G+
Sbjct: 1131 INTAECLKTLKAKKFYESMNIRGVTGLTAATITTLKGLGA 1170
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 66/277 (23%), Positives = 122/277 (44%), Gaps = 28/277 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + F + A+GG + ++++++ + + + +++
Sbjct: 807 SSWVFTVAFSLQGDILASGGDDQTVKLWDVST-------------GQCLKTFSGYTSQVW 853
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L SG +D +V ++++ + H + SV S +L ASG
Sbjct: 854 SVAYSP--DGQFLVSGSHDRIVRLWNVDTGQVLQNFLGHRAA-IRSVSLSPNGKIL-ASG 909
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD T+++WD + G+ + T+Q R+AV + F F ++A+G D+ +D+
Sbjct: 910 SDDQTIRLWD--INTGQTLQTLQ--EHRAAVQSIAF-SFDGQMLASGSDDQTIRLWDINT 964
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ GH V + F TL + D +KLW+V RT KGH N +
Sbjct: 965 G-QTLQTLQGHNAAVQSVAFNPQYRTLASGSWDQTVKLWDVKTGECKRTLKGHTNWVWSI 1023
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
S +G LL S + ++++ G V V FE
Sbjct: 1024 AFS--PNGELLASASYDGTIRLWNINSG--VCVQTFE 1056
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 13/211 (6%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++S+ + P G++L +GD +G + Y + + H V S+ +S + +L A
Sbjct: 558 IASVAFSP--DGKLLATGDTNGEIRLYQVSDWRQLLICKGHTNW-VPSLIFSPDNSIL-A 613
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++W+ G+C+ T+Q + V V F P G++L++ G D K + V
Sbjct: 614 SSSSDHTVKLWN--VITGQCLQTLQ--GHKHEVWTVAFSPDGNTLIS-GSNDHKIKLWSV 668
Query: 220 RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + F GH + F LD LV+ D +++W+V ++ +GH++
Sbjct: 669 -STGECLKTFLGHTSWIVCAVFTLDGQKLVSGSDDDTIRVWDVRTGECLKILQGHLDGIR 727
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+G+S G + S+ V ++D+ G+
Sbjct: 728 SIGIS--PDGKTIASSSDDQTVKLWDIETGK 756
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS SDD T+++WD + GKC+ T+ +AV V P G+ L+A+G D+ ++
Sbjct: 739 ASSSDDQTVKLWD--IETGKCIKTLH--GHHAAVWSVAISPQGN-LIASGSLDQTVKLWN 793
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ GH V + F L D L + G D +KLW+V+ + ++T+ G+ +
Sbjct: 794 FHTG-QCLKTLQGHSSWVFTVAFSLQGDILASGGDDQTVKLWDVSTGQCLKTFSGYTSQV 852
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S G L GS V +++V G+
Sbjct: 853 WSVAYS--PDGQFLVSGSHDRIVRLWNVDTGQ 882
Score = 51.2 bits (121), Expect = 7e-04, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 108/268 (40%), Gaps = 30/268 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK--LSS 102
I + F P + ATG +IR+Y + S IC + S
Sbjct: 558 IASVAFSPDGKLLATGDTNGEIRLYQV---------------SDWRQLLICKGHTNWVPS 602
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
L + P S +L S D V +++ + H VW+V +S L SGS
Sbjct: 603 LIFSPDNS--ILASSSSDHTVKLWNVITGQCLQTLQGH-KHEVWTVAFSPDGNTL-ISGS 658
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
+D +++W G+C+ T S + C F G LV +G D +DVR
Sbjct: 659 NDHKIKLWS--VSTGECLKTFL--GHTSWIVCAVFTLDGQKLV-SGSDDDTIRVWDVRTG 713
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ + + GH + I D T+ ++ D +KLW++ + I+T GH +
Sbjct: 714 -ECLKILQGHLDGIRSIGISPDGKTIASSSDDQTVKLWDIETGKCIKTLHGH--HAAVWS 770
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+++ G L+ GS V +++ G+
Sbjct: 771 VAISPQGNLIASGSLDQTVKLWNFHTGQ 798
>gi|147777090|emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]
Length = 570
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 139/347 (40%), Gaps = 46/347 (13%)
Query: 29 TTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSK 88
++ S + PN + SI + F P+ + + ++N K++ P+ ++ S
Sbjct: 35 SSFKSHTIPN--LISSITSLSFSPATPHHFAAAYSTSLTLFNSKTL---EPISSI---SS 86
Query: 89 VCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSV 148
D C + + G ++ + D+ G+V +D++ + + + H R V V
Sbjct: 87 FKDVVSCASFR---------SDGLLIAASDHSGLVQVFDVKTRTALRKLRGHT-RPVRLV 136
Query: 149 DYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
Y + D + SG DD ++ WD + G V+ + V C + P S L A G
Sbjct: 137 RYPRSDKLHLFSGGDDAVVKYWDVAAESG----VVEFRGHKDYVRCGDGSPASSELFATG 192
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV-NDSRVI 267
D +DVR + H K V + FL L+ C+K+W+V +++
Sbjct: 193 SYDHTVKVWDVRVSNSDAAMKINHGKPVEDVIFLPSGGLIATAGGNCVKIWDVIGGGKLL 252
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVF---------VYD---------VRWGE 309
+ + H N+ + V + G G GSE +V V+D +R+
Sbjct: 253 YSMENH--NKTVTSICVGKIGRDGGEGSEQYRVLSVGLDGYMKVFDYSKFKITHSMRFPA 310
Query: 310 PVWVHDFEP---VTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLL 353
P+ F P A G+ G + + + GE E L S GL+
Sbjct: 311 PLLSIGFSPDCATRAIGTSNGVIYAGKRKVKGEVESGLREFPSLGLM 357
>gi|225436831|ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
[Vitis vinifera]
Length = 528
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 139/347 (40%), Gaps = 46/347 (13%)
Query: 29 TTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSK 88
++ S + PN + SI + F P+ + + ++N K++ P+ ++ S
Sbjct: 35 SSFKSHTIPN--LISSITSLSFSPATPHHFAAAYSTSLTLFNSKTL---EPISSI---SS 86
Query: 89 VCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSV 148
D C + + G ++ + D+ G+V +D++ + + + H R V V
Sbjct: 87 FKDVVSCASFR---------SDGLLIAASDHSGLVQVFDVKTRTALRKLRGHT-RPVRLV 136
Query: 149 DYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
Y + D + SG DD ++ WD + G V+ + V C + P S L A G
Sbjct: 137 RYPRSDKLHLFSGGDDAVVKYWDVAAESG----VVEFRGHKDYVRCGDGSPASSELFATG 192
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNV-NDSRVI 267
D +DVR + H K V + FL L+ C+K+W+V +++
Sbjct: 193 SYDHTVKVWDVRVSNSDAAMKINHGKPVEDVIFLPSGGLIATAGGNCVKIWDVIGGGKLL 252
Query: 268 RTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVF---------VYD---------VRWGE 309
+ + H N+ + V + G G GSE +V V+D +R+
Sbjct: 253 YSMENH--NKTVTSICVGKIGRDGGEGSEQYRVLSVGLDGYMKVFDYSKFKITHSMRFPA 310
Query: 310 PVWVHDFEP---VTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLL 353
P+ F P A G+ G + + + GE E L S GL+
Sbjct: 311 PLLSIGFSPDCATRAIGTSNGVIYAGKRKVKGEVESGLREFPSLGLM 357
>gi|67475470|ref|XP_653429.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|56470375|gb|EAL48041.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
gi|449708634|gb|EMD48056.1| WD repeatcontaining protein [Entamoeba histolytica KU27]
Length = 363
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 124/308 (40%), Gaps = 77/308 (25%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I+F P++ V A G + IR+YN ++ + + + H S+
Sbjct: 24 IKFSPTNDVVAVGDMHGLIRLYNYGNIQEPNEIFTLKAHED------------STRDVCF 71
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
+G +L S DG + DL + + + D+ ++S+D KG+ + +G + G +
Sbjct: 72 NDNGNLLFSTSADGSITITDLNNQKILAKNDKAHKHGIYSLDV-KGN--IFVTGDESGRI 128
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD R KCV +
Sbjct: 129 KVWDMR--QQKCV----------------------------------------------V 140
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
VF+ H ++ + D +T+ AG DGC+ WN+N +VI N + + LS+ +
Sbjct: 141 VFNEHHDYISQLTICD-NTIFAAGGDGCMSTWNINSKKVIGISDNM--NEDLLSLSITKK 197
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
L CG ++ ++FV++ W W + P A + S+ + ++ T++ G
Sbjct: 198 DDTLVCGGQSGKLFVWE--WDN--WEY---PKNALKGHPESIESI----IAVNKNTIITG 246
Query: 348 GSDGLLHV 355
SDG++ V
Sbjct: 247 SSDGIIRV 254
>gi|332706874|ref|ZP_08426935.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332354758|gb|EGJ34237.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 1617
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 129/278 (46%), Gaps = 30/278 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++ + I F P + +GG +R+++ +S + H + D ++
Sbjct: 1060 ANHVTSIAFSPDGNKILSGGDDNSLRLWDTESGQLIHTLQGHTDF-------------VN 1106
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK-GDPVLGAS 160
+ + P G + SG D + +D + ++ + H R V ++ +S+ G+ +L S
Sbjct: 1107 DIAFSP--DGNKIFSGSDDNTLRLWDTQSGQLLYTYEGHT-RNVLAIAFSRDGNKIL--S 1161
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GS D T+++WD + G+ + T+Q +S V + F P G+ +++ G D +D
Sbjct: 1162 GSWDDTLRLWDTQ--SGQLIRTLQ--GHKSYVNGIAFSPDGNKILSRG-DDNTVRLWDTG 1216
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ +GH+ V I F D ++++ D L+LW+ + ++IRT +GH + N
Sbjct: 1217 SG-QLLYALEGHKSYVNDIAFSPDGKRILSSSHDHSLRLWDTDSGQLIRTLQGHKSYVND 1275
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
+ S G + GS + ++D + G+ +H+ E
Sbjct: 1276 IAFS--PDGNKILSGSADKTLRLWDTQSGQ--LLHNLE 1309
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 120/270 (44%), Gaps = 28/270 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
++ I I F +G + +R+++ ++ + H + H+ Y+ T S
Sbjct: 934 TNDINAIAFSRDGKQILSGSFDKTVRLWDTETGQLIHTLEG---HT-----YLVTDIAFS 985
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
G+ + SG D V +D E I + H + ++ +S G+ +L S
Sbjct: 986 P-------DGKQILSGSRDKTVRLWDTETGQLIHTLEGHTND-INAIAFSPDGNKIL--S 1035
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
G DD ++++WD + G+ + T+Q A+ V + F P G+ +++ G D +D
Sbjct: 1036 GGDDNSLRLWD--TESGQLIHTLQGHANH--VTSIAFSPDGNKILSGG-DDNSLRLWDTE 1090
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ GH V I F D + + + D L+LW+ +++ TY+GH RN
Sbjct: 1091 SG-QLIHTLQGHTDFVNDIAFSPDGNKIFSGSDDNTLRLWDTQSGQLLYTYEGH--TRNV 1147
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ ++ R G + GS + + ++D + G+
Sbjct: 1148 LAIAFSRDGNKILSGSWDDTLRLWDTQSGQ 1177
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 120/276 (43%), Gaps = 28/276 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + I F P +G R +R+++ ++ + H + + +
Sbjct: 892 TDDVTDIAFSPDGKQILSGSDDRTVRLWDTETGQLIHTLEGHTNDINAIAF--------- 942
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
G+ + SG +D V +D E I + H V + +S G +L S
Sbjct: 943 ------SRDGKQILSGSFDKTVRLWDTETGQLIHTLEGHT-YLVTDIAFSPDGKQIL--S 993
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GS D T+++WD + G+ + T++ + + + F P G+ +++ G D +D
Sbjct: 994 GSRDKTVRLWD--TETGQLIHTLE--GHTNDINAIAFSPDGNKILSGG-DDNSLRLWDTE 1048
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ GH VT I F D + +++ G D L+LW+ ++I T +GH + N
Sbjct: 1049 SG-QLIHTLQGHANHVTSIAFSPDGNKILSGGDDNSLRLWDTESGQLIHTLQGHTDFVND 1107
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHD 315
+ S G + GS+ N + ++D + G+ ++ ++
Sbjct: 1108 IAFS--PDGNKIFSGSDDNTLRLWDTQSGQLLYTYE 1141
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 28/264 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I F P +G K+R++N ++ + H + D ++ + + P
Sbjct: 856 IAFSPDGKQILSGSDDGKVRLWNTETGQLIHTLEGHTD-------------DVTDIAFSP 902
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK-GDPVLGASGSDDGT 166
G+ + SG D V +D E I + H + ++ +S+ G +L SGS D T
Sbjct: 903 --DGKQILSGSDDRTVRLWDTETGQLIHTLEGHTND-INAIAFSRDGKQIL--SGSFDKT 957
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++WD + G+ + T++ V + F P G +++ G DK +D + +
Sbjct: 958 VRLWD--TETGQLIHTLE--GHTYLVTDIAFSPDGKQILS-GSRDKTVRLWDT-ETGQLI 1011
Query: 227 LVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+GH + I F D + +++ G D L+LW+ ++I T +GH N+ + S
Sbjct: 1012 HTLEGHTNDINAIAFSPDGNKILSGGDDNSLRLWDTESGQLIHTLQGHANHVTSIAFS-- 1069
Query: 286 RHGGLLGCGSETNQVFVYDVRWGE 309
G + G + N + ++D G+
Sbjct: 1070 PDGNKILSGGDDNSLRLWDTESGQ 1093
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 63/292 (21%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + + V+D I F P +G + +R+++ ++ + H +
Sbjct: 961 WDTETGQLIHTLEGHTYLVTD----IAFSPDGKQILSGSRDKTVRLWDTETGQLIHTLEG 1016
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
H+ ++++ + P ++L GD D + +D E I H
Sbjct: 1017 ---HTN----------DINAIAFSP-DGNKILSGGD-DNSLRLWDTESGQLIHTLQGHAN 1061
Query: 143 RRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG 201
V S+ +S G+ +L SG DD ++++WD + G+ + T+Q V + F P G
Sbjct: 1062 H-VTSIAFSPDGNKIL--SGGDDNSLRLWD--TESGQLIHTLQ--GHTDFVNDIAFSPDG 1114
Query: 202 SSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWN 260
+ + + G D +D + + ++GH + V I F D + +++ D L+LW+
Sbjct: 1115 NKIFS-GSDDNTLRLWDTQSG-QLLYTYEGHTRNVLAIAFSRDGNKILSGSWDDTLRLWD 1172
Query: 261 VNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
++IRT +GH + N G++ G + + N V ++D G+ ++
Sbjct: 1173 TQSGQLIRTLQGHKSYVN--GIAFSPDGNKILSRGDDNTVRLWDTGSGQLLY 1222
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 145 VWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
V+ + +S G+ +L SG+ D T+++WD + G+ + T++ +S V + F P G+
Sbjct: 1357 VYDIAFSPDGNKIL--SGNLDNTVRLWDTQ--SGQLLYTLK--GHKSYVTEIAFSPDGNK 1410
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVN 262
+++ G D ++ + + GH V I F + +G+ D L+LWN
Sbjct: 1411 ILS-GSDDNTLRLWNTQSG-QLLYTLKGHTARVNGIAFSQNGKQILSGSADKTLRLWNTQ 1468
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVY-DVRWGE 309
+++ TY+GH N + LS R G + GS N V ++ + W E
Sbjct: 1469 SGQLLHTYEGHTAPVNGIALS--RDGNKILSGSLDNTVRLWRNYTWQE 1514
>gi|428320245|ref|YP_007118127.1| WD-40 repeat-containing protein [Oscillatoria nigro-viridis PCC 7112]
gi|428243925|gb|AFZ09711.1| WD-40 repeat-containing protein [Oscillatoria nigro-viridis PCC 7112]
Length = 1735
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS S D T+++W GK + T S V V F P G + +A GCAD+ +
Sbjct: 1113 ASASADKTVKLWSKE---GKLLKTFNHPDS---VTSVSFSPDGKT-IATGCADRTIRIWQ 1165
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
V + + GHR VT + F D TL +A D +K+WN+ + ++++T GH
Sbjct: 1166 VDNDKSAIGILSGHRDIVTSVSFSPDGKTLASASHDNTVKIWNLANKKLLQTLTGH 1221
Score = 45.1 bits (105), Expect = 0.061, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 96/264 (36%), Gaps = 43/264 (16%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIK-------------------SVLVDHPVVAV 83
DS+ + F P ATG R IRI+ + S D +A
Sbjct: 1138 DSVTSVSFSPDGKTIATGCADRTIRIWQVDNDKSAIGILSGHRDIVTSVSFSPDGKTLAS 1197
Query: 84 VDHSKVCDYYICTPAKL-----SSLKWKPGTS----GRVLGSGDYDGVVMEYDLEKKVPI 134
H + KL W G S G+ + S D V ++ E K
Sbjct: 1198 ASHDNTVKIWNLANKKLLQTLTGHKDWVLGVSFSPDGQTIASASVDKTVKLWNRESKTQK 1257
Query: 135 FERD-----EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASR 189
F+ + +H G V+SV +S L S S D T ++W+ G+ + T++
Sbjct: 1258 FKINPKTLTKHSGI-VYSVKFSPNSREL-VSASADTTAKIWN---RNGEEIRTLK--GHN 1310
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVT 249
V F G +V G AD + + + F GH+ V + F T+ +
Sbjct: 1311 DEVVSASFSRDGEKIVT-GSADDTVKVWSRSGTL--LNTFRGHQDDVRAVSFSGDGTIAS 1367
Query: 250 AGTDGCLKLWNVNDSRVIRTYKGH 273
A D +K+W + + + + GH
Sbjct: 1368 ASKDKIVKIWKPDSTPLNKILSGH 1391
Score = 44.7 bits (104), Expect = 0.074, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 38/241 (15%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
DS+ + P D A+ + ++++++ L+D + HS + + S
Sbjct: 1434 DSVTWVSISPDDKTVASASDDKTVKVWSLNGKLLD-----TLSHSGI----------VRS 1478
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLE-KKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
+ + P G+++ + D + + K +F + +H V SV +S G + A+
Sbjct: 1479 VSFSP--DGKIIAAASADRKLYLWRWNGAKATLFAKLDHSNP-VISVSFSPDGKTIATAT 1535
Query: 161 GSDDGT--------------MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
++D + +W K + T+ + +V V F P G + +A
Sbjct: 1536 AAEDKASGKKKAFEITGEKRVYLWQFNGSSAKILKTLD---HQDSVKNVSFSPDGKT-IA 1591
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRV 266
A CADKK Y ++ V + H TV + F L+ A +KLW+ + +
Sbjct: 1592 AACADKKVYLWEFDGKVANLTEKLDHSDTVESVSFSPDGKLIAASGGNTVKLWDFDGKKA 1651
Query: 267 I 267
+
Sbjct: 1652 L 1652
>gi|302563633|ref|NP_001181479.1| WD repeat-containing protein 5B [Macaca mulatta]
gi|402859203|ref|XP_003894056.1| PREDICTED: WD repeat-containing protein 5B [Papio anubis]
gi|355746468|gb|EHH51082.1| hypothetical protein EGM_10407 [Macaca fascicularis]
gi|380789237|gb|AFE66494.1| WD repeat-containing protein 5B [Macaca mulatta]
gi|383414291|gb|AFH30359.1| WD repeat-containing protein 5B [Macaca mulatta]
gi|384942462|gb|AFI34836.1| WD repeat-containing protein 5B [Macaca mulatta]
Length = 330
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKLWDVR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
++++RF + ++TA D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PISFVRFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
>gi|440796711|gb|ELR17818.1| WD repeat protein [Acanthamoeba castellanii str. Neff]
Length = 557
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 36/231 (15%)
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G G L SG DG + ++ E + H R VW V + L AS S D T
Sbjct: 286 GEEGLTLASGSSDGTIKIWEAETGSCLHTLHGHTSR-VWDVSSAPSGLFL-ASASGDATA 343
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV-DPV 226
+WD VST V V FHP G + +A G D+ V ++ +P
Sbjct: 344 MLWD--LGRQAVVSTKTFKGHEGDVYTVHFHP-GENHIATGGYDRAVNLASVSHVIFNPY 400
Query: 227 --LVFDGHRKTVTYIRFLDVDT-------------------------LVTAGTDGCLKLW 259
L+ G + ++F D+ + L+T+ D +LW
Sbjct: 401 GNLIISGSKDNT--VKFWDITSGLCIKTYSTYLGEVTSVAMSHNGSLLLTSSKDNSNRLW 458
Query: 260 NVNDSRVIRTYKGHVN-NRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+V +R IR +KGH N ++NF+ S + L+ SE ++++D+ G+
Sbjct: 459 DVRTARPIRRFKGHQNTSKNFLRASFGPNESLIVGASEDEMIYIWDIMTGD 509
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L SGS D T++ WD G C+ T S V V GS L+ D
Sbjct: 403 LIISGSKDNTVKFWD--ITSGLCIKTY--STYLGEVTSVAMSHNGS-LLLTSSKDNSNRL 457
Query: 217 YDVRKMVDPVLVFDGHRKTV-TYIR--FLDVDTLVT-AGTDGCLKLWNVNDSRVIRTYKG 272
+DVR P+ F GH+ T ++R F ++L+ A D + +W++ +++T KG
Sbjct: 458 WDVR-TARPIRRFKGHQNTSKNFLRASFGPNESLIVGASEDEMIYIWDIMTGDLLQTLKG 516
Query: 273 HVNNRNFVGLSVWR-HGGLLG-CGSE-TNQVFVYD 304
H V + W H LL CG + T + + YD
Sbjct: 517 HTGT---VYTTTWNPHQSLLASCGDDGTVKTWWYD 548
>gi|428298093|ref|YP_007136399.1| (myosin heavy-chain) kinase [Calothrix sp. PCC 6303]
gi|428234637|gb|AFZ00427.1| (Myosin heavy-chain) kinase [Calothrix sp. PCC 6303]
Length = 1484
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
+ G+ L +GD +G+V + + I H + SV++S D ASG DGT++
Sbjct: 877 SDGQFLATGDGNGIVRLWKVSTSREILTCKGHTSG-ILSVNFSS-DAYTFASGGYDGTIK 934
Query: 169 MWDPRCDGGKCVSTVQPS--ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+W+ + GKC+ T++ + S V C E ++A+G +D +D+ +
Sbjct: 935 LWNSQ--NGKCLKTLEGHNYSVNSVVFCSE-----GKILASGSSDNTIRLWDI-TTGQCL 986
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAG-TDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+ +GH ++ I D ++ +G +D ++LWN + ++ +GH N+ + V S
Sbjct: 987 QILEGHTDSILSIALSTDDKILASGASDNTVRLWNTQTGKCLKILQGHTNSVSSVVFS-- 1044
Query: 286 RHGGLLGCGSETNQVFVYDVRWGE----------PVWVHDFEP 318
G LL + +++++ G+ P++ F P
Sbjct: 1045 PDGQLLASAGYDATLKLWEIQTGQCKSTLETPNNPIFAITFSP 1087
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 78/346 (22%), Positives = 146/346 (42%), Gaps = 58/346 (16%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+DSI I D + A+G +R++N ++ K +S
Sbjct: 993 TDSILSIALSTDDKILASGASDNTVRLWNTQT-------------GKCLKILQGHTNSVS 1039
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G++L S YD + ++++ E ++++ +S +L +S
Sbjct: 1040 SVVFSP--DGQLLASAGYDATLKLWEIQTG-QCKSTLETPNNPIFAITFSPDSKILASSS 1096
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
+ +++WD + KC+ ++ + V + F P G++LV+ G DK +++
Sbjct: 1097 NQ--IIKLWDISTN--KCIQILE--GHFNIVRSIAFSPKGNNLVS-GSYDKTVRFWNI-S 1148
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ + G+ V I F LD L + G D + +W+V+ + +RT +GH + +
Sbjct: 1149 TGECFKILQGYSNWVNSITFSLDSQKLAS-GDDLAIVIWDVSSGKSLRTLQGHTHWVQSI 1207
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPV--------WVHD--FEP---VTAAGSERG 327
L+ + G +L GS N V ++D + GE + WV F P + A+GS G
Sbjct: 1208 ALN--QDGTILASGSADNTVRLWDFQTGECLKLLQGHSDWVQSVAFSPDNQLLASGSADG 1265
Query: 328 FVS------SVCWRRVGE-----------DECTLVAGGSDGLLHVF 356
V CW+ + D L +G SDG L ++
Sbjct: 1266 TVRLWEVPVGRCWKILRSNYSIRSVAFSLDGEILASGLSDGTLQLW 1311
Score = 47.4 bits (111), Expect = 0.012, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+L GH + + F D T + G DG +KLWN + + ++T +GH + N V
Sbjct: 902 ILTCKGHTSGILSVNFSSDAYTFASGGYDGTIKLWNSQNGKCLKTLEGHNYSVNSVVFC- 960
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTL 344
G +L GS N + ++D+ G+ + + + G S+ + D+ L
Sbjct: 961 -SEGKILASGSSDNTIRLWDITTGQCLQILE-----------GHTDSILSIALSTDDKIL 1008
Query: 345 VAGGSDGLLHVF 356
+G SD + ++
Sbjct: 1009 ASGASDNTVRLW 1020
Score = 44.3 bits (103), Expect = 0.094, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D + ASGS D T+++WD + G+C+ +Q V V F P + L+A+G AD
Sbjct: 1212 DGTILASGSADNTVRLWDFQT--GECLKLLQ--GHSDWVQSVAFSP-DNQLLASGSADGT 1266
Query: 214 AYAYDVRKMVDPV----LVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
++V PV + + + LD + L + +DG L+LWN++ S ++T
Sbjct: 1267 VRLWEV-----PVGRCWKILRSNYSIRSVAFSLDGEILASGLSDGTLQLWNIHTSECLKT 1321
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ NN ++ +L G V ++++ GE
Sbjct: 1322 LQVG-NNIGTRSIAFSPDSKVLASGISNASVGLWNISTGE 1360
Score = 44.3 bits (103), Expect = 0.095, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 25/171 (14%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPI-----FERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
++L SG DG V ++ VP+ R + R SV +S +L ASG DGT
Sbjct: 1256 QLLASGSADGTVRLWE----VPVGRCWKILRSNYSIR---SVAFSLDGEIL-ASGLSDGT 1307
Query: 167 MQMWDPRCDGGKCVSTVQPS---ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
+Q+W+ +C+ T+Q +RS + F P S ++A+G ++ +++
Sbjct: 1308 LQLWNIHTS--ECLKTLQVGNNIGTRS----IAFSP-DSKVLASGISNASVGLWNI-STG 1359
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ + H +V + F D L ++G D + LW++N ++ +GH
Sbjct: 1360 EFLRSLQAHTDSVLAVAFSPDSKILASSGDDQTVILWDINSGECLKILRGH 1410
Score = 41.6 bits (96), Expect = 0.53, Method: Composition-based stats.
Identities = 51/246 (20%), Positives = 107/246 (43%), Gaps = 31/246 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + + F P + + A+G +R++ + PV C + + +
Sbjct: 1243 SDWVQSVAFSPDNQLLASGSADGTVRLWEV-------PV-------GRCWKILRSNYSIR 1288
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ + G +L SG DG + +++ + + + G R S+ +S VL A
Sbjct: 1289 SVAFS--LDGEILASGLSDGTLQLWNIHTSECLKTLQVGNNIGTR--SIAFSPDSKVL-A 1343
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SG + ++ +W+ G+ + ++Q A +V V F P S ++A+ D+ +D+
Sbjct: 1344 SGISNASVGLWN--ISTGEFLRSLQ--AHTDSVLAVAFSP-DSKILASSGDDQTVILWDI 1398
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ + + GH + + F D + + + D +KLWNV ++T +N R
Sbjct: 1399 NSG-ECLKILRGHSLWIRSVAFSSDGNIIASCSCDSTIKLWNVETGECLKTL---INKRP 1454
Query: 279 FVGLSV 284
+ +++
Sbjct: 1455 YENMTI 1460
>gi|281410823|gb|ADA68824.1| HNWD3 [Podospora anserina]
gi|281410825|gb|ADA68825.1| HNWD3 [Podospora anserina]
Length = 420
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ + SG D + +D + H G VWSV +S D ASGS D T+++W
Sbjct: 101 GQRVASGSVDKTIKIWDAASGTCTQTLEGHRGP-VWSVAFSP-DGQRVASGSVDKTIKIW 158
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G C T++ R V V F P G VA+G DK +D +
Sbjct: 159 DAAS--GTCTQTLE--GHRGPVWSVAFSPDGQ-RVASGSVDKTIKIWDAASGT-CTQTLE 212
Query: 231 GHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GHR TV + F V +G+ D +K+W+ +T +GH + V S G
Sbjct: 213 GHRGTVRSVAFSPDGQRVASGSVDETIKIWDAASGTCTQTLEGHRGSVRSVAFS--PDGQ 270
Query: 290 LLGCGSETNQVFVYDVRWGE----------PVWVHDFEP 318
+ GS N + ++D G PVW F P
Sbjct: 271 RVASGSVDNTIKIWDAASGTCTQTLEGHRGPVWSVAFSP 309
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 100/259 (38%), Gaps = 26/259 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+G + + I+I++ S + H +P
Sbjct: 179 VAFSPDGQRVASGSVDKTIKIWDAASGTCTQTLEG---HRGTVRSVAFSP---------- 225
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ + SG D + +D + H G V SV +S D ASGS D T+
Sbjct: 226 --DGQRVASGSVDETIKIWDAASGTCTQTLEGHRGS-VRSVAFSP-DGQRVASGSVDNTI 281
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD G C T++ R V V F P G VA+G D+ +D
Sbjct: 282 KIWDAAS--GTCTQTLE--GHRGPVWSVAFSPDG-QRVASGSVDETIKIWDAASGT-CTQ 335
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+GHR TV + F V +G+ D +K+W+ +T +GH + V S
Sbjct: 336 TLEGHRGTVWSVAFSPDGQRVASGSVDKTIKIWDAASGTCTQTLEGHRGSVLSVAFS--P 393
Query: 287 HGGLLGCGSETNQVFVYDV 305
G + GS + ++D
Sbjct: 394 DGQRVASGSVDKTIKIWDA 412
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 68/171 (39%), Gaps = 19/171 (11%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
ASGSDD T+++WD G C T++ R V V F P G VA+G D +D
Sbjct: 21 ASGSDDNTIKIWDAAS--GTCTQTLE--GHRGPVWSVAFSPDG-QRVASGSDDNTIKIWD 75
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNR 277
+GHR V + F V +G+ D +K+W+ +T +GH
Sbjct: 76 AASGT-CTQTLEGHRGPVLSVAFSPDGQRVASGSVDKTIKIWDAASGTCTQTLEGHRGPV 134
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE----------PVWVHDFEP 318
V S G + GS + ++D G PVW F P
Sbjct: 135 WSVAFS--PDGQRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSP 183
>gi|190896164|gb|ACE96595.1| U5 snRNP-specific protein-like factor [Populus tremula]
Length = 215
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + S D V +D+E I + EH V S S+ P L SGSDDGT ++W
Sbjct: 23 GSQIISASPDKTVRAWDVETGKQIKKMAEHSSF-VNSCCPSRRGPPLVVSGSDDGTSKLW 81
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R G +Q + + V F S + G D +D+RK + + +
Sbjct: 82 DLRQKGA-----IQTFPDKYQITAVSFSD-ASDKIFTGGIDNDVKVWDIRKG-EVTMTLE 134
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVGLS 283
GH+ +T ++ D L+T G D L +W++ +R ++ ++GH +N +N + S
Sbjct: 135 GHQDMITSMQLSPDGSYLLTDGMDNKLCIWDMRPYAPQNRRVKIFEGHQHNFEKNLLKCS 194
Query: 284 VWRHGGLLGCGSETNQVFVYD 304
G + GS V+++D
Sbjct: 195 WSPDGSEVTAGSADRMVYIWD 215
>gi|407038199|gb|EKE38981.1| WD domain, G-beta repeat-containing protein [Entamoeba nuttalli
P19]
Length = 363
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 124/308 (40%), Gaps = 77/308 (25%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
I+F P++ + A G + IR+YN ++ + + + H +C
Sbjct: 24 IKFSPTNDIVAVGDMHGLIRLYNYGNIQEPNEMFNLKAHED-STRDVCF----------- 71
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
SG +L S DG + DL + + + D+ ++S+D KG+ + +G + G +
Sbjct: 72 NDSGNLLFSTSADGSITITDLNNQKILAKNDKAHKHGIYSLDV-KGN--IFVTGDESGRI 128
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD R KCV +
Sbjct: 129 KVWDMR--QQKCV----------------------------------------------V 140
Query: 228 VFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
VF+ H ++ + D +T+ AG DGC+ WN+N +VI N + + LS+ +
Sbjct: 141 VFNEHHDYISQLTICD-NTIFAAGGDGCMSTWNINSKKVIGISDNM--NEDLLSLSITKK 197
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
L CG ++ ++FV++ W W + P A + S+ + ++ T++ G
Sbjct: 198 DDTLVCGGQSGKLFVWE--WDN--WEY---PKNALKGHPESIESI----IAVNKNTIITG 246
Query: 348 GSDGLLHV 355
SDG++ V
Sbjct: 247 SSDGIIRV 254
>gi|389746870|gb|EIM88049.1| coatomer protein [Stereum hirsutum FP-91666 SS1]
Length = 848
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 24/241 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + ++F P++ G + IYN H A+V +V + + ++
Sbjct: 13 SDRVKAVDFHPTEPWLLAGLYNGTVNIYN-------HETGALVKTFEVAEVPVRCCRFIA 65
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
W V GS D+ V Y+ +KV FE R + + VL +G
Sbjct: 66 RKNW------FVAGSDDFQLRVFNYNTHEKVTAFEAHPDYIRCL--TVHPSASIVL--TG 115
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD T++ WD KC+ + + + + +P ++ A+ C D+ + +
Sbjct: 116 SDDMTIKAWD-WDKQWKCIQSYE--GHTHYIMNIAINPKDANTFASACLDRTVKIWSLGA 172
Query: 222 MVDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
V P + H K V Y+ F D LVT G D +K+W+ ++T + H NN +
Sbjct: 173 PV-PNFTMEAHDKGVNYVEFYPGADKPYLVTTGDDKTVKIWDYLSKSCVQTMESHTNNVS 231
Query: 279 F 279
F
Sbjct: 232 F 232
>gi|55977847|sp|Q10051.2|PRP19_CAEEL RecName: Full=Pre-mRNA-processing factor 19 homolog; AltName:
Full=PRP19/PSO4 homolog
gi|373220269|emb|CCD72869.1| Protein PRP-19 [Caenorhabditis elegans]
Length = 492
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 128/313 (40%), Gaps = 37/313 (11%)
Query: 46 GVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKW 105
G+ D ++ TGGI + + +Y+ + + + H+K + + P ++++
Sbjct: 213 GITALDIKGNLSLTGGIDKTVVLYDYEK---EQVMQTFKGHNKKINAVVLHPDNITAISA 269
Query: 106 KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
+ RV + D + D+ + P+ + S++ S GD +L S SDD
Sbjct: 270 SADSHIRVWSATDSSSKAI-IDVHQ-APVTD---------ISLNAS-GDYIL--SASDDS 315
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
D R C +V+P S+ AV +EFHP G + G AD +D++
Sbjct: 316 YWAFSDIRSGKSLCKVSVEP-GSQIAVHSIEFHPDGL-IFGTGAADAVVKIWDLKNQT-V 372
Query: 226 VLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
F GH V I F + L T DG +KLW++ + ++T+ + LS
Sbjct: 373 AAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFANE-EKQPINSLSF 431
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE-PVTAAGSERGFVSSVCWRRVGEDECT 343
G LG G + QV + W E V + D PVT R GE+ +
Sbjct: 432 DMTGTFLGIGGQKVQVL-HVKSWSEVVSLSDHSGPVTGV-------------RFGENARS 477
Query: 344 LVAGGSDGLLHVF 356
LV D L VF
Sbjct: 478 LVTCSLDKSLRVF 490
>gi|358456674|ref|ZP_09166896.1| serine/threonine protein kinase with WD40 repeats [Frankia sp. CN3]
gi|357079995|gb|EHI89432.1| serine/threonine protein kinase with WD40 repeats [Frankia sp. CN3]
Length = 852
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 81/185 (43%), Gaps = 15/185 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKK----VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
GR+L + DG +D + P+ H G VW V +S D L A+G DGT
Sbjct: 523 GRLLATVSADGTARLWDTTDRGIGVKPLATFTGHVGG-VWDVAFSP-DGRLLATGGVDGT 580
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD--VRKMV- 223
++WDP G + S V V F P G L+A G AD A +D +R +
Sbjct: 581 ARLWDPTRRGDNIAPLATFAGHTSVVGEVAFSPDG-KLLATGSADGTARLWDTSIRAVTS 639
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV----NDSRVIRTYKGHVNNRN 278
DP F GH + V + F + L TA D +LW+ + + T+ GHVN+
Sbjct: 640 DPRTTFVGHAQGVNELAFSPNGRLLATASDDATARLWDTVGRGSSVAAVTTFTGHVNSAG 699
Query: 279 FVGLS 283
V S
Sbjct: 700 DVAFS 704
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 95/241 (39%), Gaps = 26/241 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVD-HPVVAVVDHSKVCDYYICTPAKLSSLKWK 106
+ F P + ATGG+ R+++ + P+ H+ V +P
Sbjct: 563 VAFSPDGRLLATGGVDGTARLWDPTRRGDNIAPLATFAGHTSVVGEVAFSP--------- 613
Query: 107 PGTSGRVLGSGDYDGVVMEYDLE-KKVPIFERDEHGG--RRVWSVDYSKGDPVLGASGSD 163
G++L +G DG +D + V R G + V + +S +L A+ SD
Sbjct: 614 ---DGKLLATGSADGTARLWDTSIRAVTSDPRTTFVGHAQGVNELAFSPNGRLL-ATASD 669
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM- 222
D T ++WD G + + ++ V F P G L+A D A ++
Sbjct: 670 DATARLWDTVGRGSSVAAVTTFTGHVNSAGDVAFSPDGR-LLATTSGDGTARLWETASRG 728
Query: 223 --VDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV----NDSRVIRTYKGHVN 275
+ P+ GH TV + F D L T+GTDG +LW+ + + T +GH
Sbjct: 729 PSITPLASLTGHTDTVNDVAFSPDGLLLATSGTDGTARLWDAAGRGGNVTPLATLEGHTG 788
Query: 276 N 276
Sbjct: 789 K 789
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 96/262 (36%), Gaps = 42/262 (16%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYN--IKSVLVDHPV 80
WD R + + A + +G + F P + ATG R+++ I++V D P
Sbjct: 584 WDPTRRGDNIAPLATFAGHTSVVGEVAFSPDGKLLATGSADGTARLWDTSIRAVTSD-PR 642
Query: 81 VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
V H++ + +P +GR+L + D +D +
Sbjct: 643 TTFVGHAQGVNELAFSP------------NGRLLATASDDATARLWDTVGR--------- 681
Query: 141 GGRRVWSVDYSKG------------DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
G V +V G D L A+ S DGT ++W+ G +
Sbjct: 682 -GSSVAAVTTFTGHVNSAGDVAFSPDGRLLATTSGDGTARLWETASRGPSITPLASLTGH 740
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM---VDPVLVFDGHRKTVTYIRF-LDV 244
V V F P G L +G D A +D V P+ +GH V + F D
Sbjct: 741 TDTVNDVAFSPDGLLLATSGT-DGTARLWDAAGRGGNVTPLATLEGHTGKVDDVLFSPDG 799
Query: 245 DTLVTAGTDGCLKLWNVNDSRV 266
L T G D +LW+++ R+
Sbjct: 800 SRLATTGADLTARLWDLSPDRI 821
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 65/166 (39%), Gaps = 11/166 (6%)
Query: 148 VDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAA 207
V +S +L +G+ D +WD G +S + V F P G L+A
Sbjct: 470 VAFSPDGRLLATTGTKDHVAHLWDTNRRGENVMSLATLQGHTDWLGDVAFSPDG-RLLAT 528
Query: 208 GCADKKAYAYDVRKM---VDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV-- 261
AD A +D V P+ F GH V + F D L T G DG +LW+
Sbjct: 529 VSADGTARLWDTTDRGIGVKPLATFTGHVGGVWDVAFSPDGRLLATGGVDGTARLWDPTR 588
Query: 262 --NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
++ + T+ GH + V S G LL GS ++D
Sbjct: 589 RGDNIAPLATFAGHTSVVGEVAFSP--DGKLLATGSADGTARLWDT 632
>gi|268572563|ref|XP_002648992.1| Hypothetical protein CBG21324 [Caenorhabditis briggsae]
Length = 492
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 126/313 (40%), Gaps = 37/313 (11%)
Query: 46 GVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKW 105
G+ D ++ TGGI + + +YN + + V H+K + + P +++
Sbjct: 213 GITALDIKGNLSLTGGIDKTVVLYNYEK---EQVVQTFKGHNKKINAVVLHPDTKTAISA 269
Query: 106 KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
+ RV + D V+ D+ + P+ + S++ S GD +L S SDD
Sbjct: 270 SADSHIRVWNADDASSKVV-IDIHQ-APVTD---------ISLNAS-GDYIL--SASDDS 315
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
D C +V P S+ AV C+EFHP G + G AD +D++
Sbjct: 316 YWAFSDIHSGKSLCKVSVDP-GSQIAVHCIEFHPDG-LIFGTGAADAVVKIWDLKNQ-GI 372
Query: 226 VLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
F GH V I F + L T DG +KLW++ + ++T+ + LS
Sbjct: 373 AAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFANE-EKQPINSLSF 431
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE-PVTAAGSERGFVSSVCWRRVGEDECT 343
G LG G + QV + W E + D PVT R GE+ +
Sbjct: 432 DITGSFLGIGGQKVQVL-HVKSWSEVASLSDHSGPVTGV-------------RFGENARS 477
Query: 344 LVAGGSDGLLHVF 356
LV D L VF
Sbjct: 478 LVTCSLDKSLRVF 490
>gi|428310074|ref|YP_007121051.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
gi|428251686|gb|AFZ17645.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 1197
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 48/249 (19%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG 158
KL+S+K+ P G+ L + DG ++L K P+ + H G+ +WSV +S PV G
Sbjct: 665 KLTSVKFSP--DGQHLATASEDGTARLWNLSGK-PLTQFKGHIGQ-IWSVSFS---PVRG 717
Query: 159 ------------ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
A+ +DGT+++WD G+ ++ Q S V V F P G SLV
Sbjct: 718 GTSAAQGVGQRLATAGEDGTVRVWDL---SGRELAQYQHSG---PVSTVSFSPDGQSLVT 771
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSR 265
D ++++K + + + G R V F D + TAG DG +LW+++ +
Sbjct: 772 VTGLDGTVRLWNLQKQL--LAQWKGSRDLVLSASFSPDGQRIATAGVDGTTRLWDLS-GQ 828
Query: 266 VIRTYKGHVNNRNFVGLS----------------VWRHGGLLGCGSETNQVFVYDVRWGE 309
++ KGH V S +W G L G + Q+ + WGE
Sbjct: 829 LLAELKGHQGWVYRVSFSPDGQRLATAGADGTARLWDLSGQL--GRDRQQLAGWRAHWGE 886
Query: 310 PVWVHDFEP 318
W +F P
Sbjct: 887 -AWSVNFSP 894
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 18/182 (9%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G+ L S DG ++L ++ GG + +V +S L +G
Sbjct: 889 SVNFSP--DGQTLASAGADGTARLWNLSGQLLARLNGHQGG--INAVVFSPDGQRLATAG 944
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR- 220
D GT+++W+ + + V+ + V + F P G LV+AG D A +D+
Sbjct: 945 QD-GTVRLWNLSGE-----ALVEIKDHKRPVYSLRFSPDGQRLVSAG-EDGTARLWDLNG 997
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVI--RTYKGHVNNR 277
KM+ F GH++ + + F D T+ TAG DG ++LWN+ ++I R ++ V +
Sbjct: 998 KMLAQ---FVGHKEAIWSVSFSPDGHTVATAGKDGTVRLWNLFGQQLIQWRAHQDGVYSV 1054
Query: 278 NF 279
NF
Sbjct: 1055 NF 1056
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 134 IFERDEHGGR--RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
I ER++ G RV SV +S + +G +DGT+++W+ GK ++ Q + +++
Sbjct: 571 IHERNQLQGHQGRVDSVTFSPDGQYIATTG-EDGTVRLWNL---SGKQLT--QFTVAQAR 624
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V CV F P G +A D A +++ + F GH+ +T ++F D L TA
Sbjct: 625 VKCVTFSPDGQH-IATASEDGIARLWNLSG--KQLAQFVGHQDKLTSVKFSPDGQHLATA 681
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
DG +LWN++ + + +KGH+ V S R G
Sbjct: 682 SEDGTARLWNLS-GKPLTQFKGHIGQIWSVSFSPVRGG 718
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 30/235 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+ G R++N+ L+ + H + + +P
Sbjct: 890 VNFSPDGQTLASAGADGTARLWNLSGQLL----ARLNGHQGGINAVVFSP---------- 935
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L + DG V ++L + + +D R V+S+ +S L ++G +DGT
Sbjct: 936 --DGQRLATAGQDGTVRLWNLSGEALVEIKDHK--RPVYSLRFSPDGQRLVSAG-EDGTA 990
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD GK ++ Q + A+ V F P G ++ AG D +++ ++
Sbjct: 991 RLWDL---NGKMLA--QFVGHKEAIWSVSFSPDGHTVATAG-KDGTVRLWNL--FGQQLI 1042
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIR--TYKGHVNNRNF 279
+ H+ V + F D LVTAG D ++ WN++ + R T++G V + +F
Sbjct: 1043 QWRAHQDGVYSVNFSPDGQRLVTAGIDTTVRRWNLSGQELARLNTHQGGVLSASF 1097
Score = 45.1 bits (105), Expect = 0.058, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 94/258 (36%), Gaps = 63/258 (24%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I + F P AT G +R++N+ +V + DH + + SL+
Sbjct: 928 INAVVFSPDGQRLATAGQDGTVRLWNLSG----EALVEIKDHKR----------PVYSLR 973
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G+ L S DG +DL K + + +WSV +S + +G D
Sbjct: 974 FSP--DGQRLVSAGEDGTARLWDLNGK--MLAQFVGHKEAIWSVSFSPDGHTVATAGK-D 1028
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD------------- 211
GT+++W+ +Q A + V V F P G LV AG
Sbjct: 1029 GTVRLWNLFGQ-----QLIQWRAHQDGVYSVNFSPDGQRLVTAGIDTTVRRWNLSGQELA 1083
Query: 212 ----------KKAYAYDVRKMVDP---------------VLVFDGHRKTVTYIRF-LDVD 245
+++ D +++ + GH+ V + F +
Sbjct: 1084 RLNTHQGGVLSASFSPDGQRIATTGQDGTVHLRLLSGLQIAQLSGHQGRVYSVSFSQNGQ 1143
Query: 246 TLVTAGTDGCLKLWNVND 263
L TAG DG +KLW + D
Sbjct: 1144 YLATAGRDGMIKLWRIED 1161
Score = 39.7 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 70/282 (24%), Positives = 115/282 (40%), Gaps = 46/282 (16%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR--VWSVDYSKGDPVL 157
+S++ + P V +G DG V ++L+K++ + G R V S +S +
Sbjct: 757 VSTVSFSPDGQSLVTVTG-LDGTVRLWNLQKQL----LAQWKGSRDLVLSASFSPDGQRI 811
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
+G D GT ++WD G+ ++ ++ + V V F P G L AG AD A +
Sbjct: 812 ATAGVD-GTTRLWDL---SGQLLAELK--GHQGWVYRVSFSPDGQRLATAG-ADGTARLW 864
Query: 218 DVRKMV----DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
D+ + + + H + F D TL +AG DG +LWN++ + R G
Sbjct: 865 DLSGQLGRDRQQLAGWRAHWGEAWSVNFSPDGQTLASAGADGTARLWNLSGQLLAR-LNG 923
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE-PVTAAGSERGFVSS 331
H N V S G L + V ++++ V + D + PV +
Sbjct: 924 HQGGINAVVFS--PDGQRLATAGQDGTVRLWNLSGEALVEIKDHKRPVYSL--------- 972
Query: 332 VCWRRVGEDECTLVAGGSDG----------LLHVFVGKKKPL 363
R D LV+ G DG +L FVG K+ +
Sbjct: 973 ----RFSPDGQRLVSAGEDGTARLWDLNGKMLAQFVGHKEAI 1010
>gi|17230292|ref|NP_486840.1| hypothetical protein alr2800 [Nostoc sp. PCC 7120]
gi|20140995|sp|Q8YTC2.1|Y2800_ANASP RecName: Full=Uncharacterized WD repeat-containing protein alr2800
gi|17131893|dbj|BAB74499.1| WD-repeat protein [Nostoc sp. PCC 7120]
Length = 1258
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 50/317 (15%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
F +Q A +N++ WD+ +SS +D I I F P A+
Sbjct: 944 FSPDRQILASGSNDKTVKLWDWQTGKYISSLEGH----TDFIYGIAFSPDSQTLASASTD 999
Query: 64 RKIRIYNIKS-----VLVDHP--VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
+R++NI + +L++H V AVV H + G+++ +
Sbjct: 1000 SSVRLWNISTGQCFQILLEHTDWVYAVVFHPQ----------------------GKIIAT 1037
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGR---RVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
G D V +++ + EH + WS D L AS S D ++++WD
Sbjct: 1038 GSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQ-----LLASASADQSVRLWD-- 1090
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
C G+CV ++ ++R V F P G ++A D+ +D ++ + GH
Sbjct: 1091 CCTGRCVGILRGHSNR--VYSAIFSPNG-EIIATCSTDQTVKIWDWQQG-KCLKTLTGHT 1146
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
V I F D L +A D +++W+VN + GH + + V S G ++
Sbjct: 1147 NWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFS--PDGEVVA 1204
Query: 293 CGSETNQVFVYDVRWGE 309
GS+ V +++V+ GE
Sbjct: 1205 SGSQDQTVRIWNVKTGE 1221
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 24/228 (10%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + AT +R++ +KS + ++ HS + + +P
Sbjct: 650 FSPEGQLLATCDTDCHVRVWEVKSGKL---LLICRGHSNWVRFVVFSP------------ 694
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G +L S D V + + V I H V+SV + L AS S D T+++
Sbjct: 695 DGEILASCGADENVKLWSVRDGVCIKTLTGHE-HEVFSVAFHPDGETL-ASASGDKTIKL 752
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD G C+ T+ + V CV F P G++L A+ AD +DV + +
Sbjct: 753 WD--IQDGTCLQTL--TGHTDWVRCVAFSPDGNTL-ASSAADHTIKLWDVSQG-KCLRTL 806
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
H V + F D TL + D +K+WN + ++TY GH N+
Sbjct: 807 KSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNS 854
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 31/249 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P + ATG ++++NI + + + +HS K+
Sbjct: 1020 TDWVYAVVFHPQGKIIATGSADCTVKLWNIST---GQCLKTLSEHSD----------KIL 1066
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ W P G++L S D V +D + H RV+S +S ++ A+
Sbjct: 1067 GMAWSP--DGQLLASASADQSVRLWDCCTGRCVGILRGHSN-RVYSAIFSPNGEII-ATC 1122
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD GKC+ T+ + + V + F P G ++A+ D+ +DV
Sbjct: 1123 STDQTVKIWD--WQQGKCLKTL--TGHTNWVFDIAFSPDG-KILASASHDQTVRIWDVNT 1177
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDS------RVIRTYKGHV 274
+ GH V+ + F +V +G+ D +++WNV R R Y+G +
Sbjct: 1178 GKCHHICI-GHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQILRAKRLYEG-M 1235
Query: 275 NNRNFVGLS 283
N GL+
Sbjct: 1236 NITGVTGLT 1244
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 36/268 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVC-DYYICTPAKLSSLKWK 106
+ F A+G R I+I+N H+ C YI + S+ +
Sbjct: 816 VAFSADGQTLASGSGDRTIKIWNY--------------HTGECLKTYIGHTNSVYSIAYS 861
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDG 165
P + ++L SG D + +D + + I + HG V SV +S L A S D
Sbjct: 862 PDS--KILVSGSGDRTIKLWDCQTHICI--KTLHGHTNEVCSVAFSPDGQTL-ACVSLDQ 916
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRKMV 223
++++W+ C G+C+ + + V F P ++A+G DK K + + K +
Sbjct: 917 SVRLWN--CRTGQCLKAWYGNTDWALP--VAFSP-DRQILASGSNDKTVKLWDWQTGKYI 971
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ +GH + I F D TL +A TD ++LWN++ + + H ++V
Sbjct: 972 SSL---EGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHT---DWVYA 1025
Query: 283 SVWR-HGGLLGCGSETNQVFVYDVRWGE 309
V+ G ++ GS V ++++ G+
Sbjct: 1026 VVFHPQGKIIATGSADCTVKLWNISTGQ 1053
>gi|72390337|ref|XP_845463.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359501|gb|AAX79937.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801998|gb|AAZ11904.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 813
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLD-----------VDTLV 248
F S++V ++K YD+ + ++ + H + + + L + +
Sbjct: 655 FASNVVVWAASNKSFGVYDLHVGQNINVIEEAHTRPIHSVALLTAGRYASIGSNHLHMCL 714
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
TAG D ++LW++ R +R H +N VG++ G L+ GSET VF+YDV G
Sbjct: 715 TAGMDSTVRLWDIRQKRSVRQLAQHRSNATAVGVAFSPTGALVAVGSETRNVFIYDVGSG 774
Query: 309 EPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
V D PVT +++CW + E L G S+G
Sbjct: 775 A---VLDKLPVTDTA------TAICWHPI---ENVLAIGTSNG 805
>gi|67078490|ref|NP_001019937.1| WD repeat-containing protein 5B [Rattus norvegicus]
gi|81908676|sp|Q4V8C4.1|WDR5B_RAT RecName: Full=WD repeat-containing protein 5B
gi|66910626|gb|AAH97449.1| WD repeat domain 5B [Rattus norvegicus]
gi|149060583|gb|EDM11297.1| WD repeat domain 5B [Rattus norvegicus]
Length = 328
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 61/262 (23%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
A +SS+K+ P +G L S D +++ YD + K ++ WS D S+
Sbjct: 40 AAISSVKFSP--NGEWLASSAADALIIIWGAYDGKCKKTLYGHSLEISDVAWSSDSSRL- 96
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
S SDD T+++WD R GKC+ T++ V C +F+P S+L+ +G D+
Sbjct: 97 ----VSASDDKTLKLWDVR--SGKCLKTLK--GHSDFVFCCDFNP-PSNLIVSGSFDESV 147
Query: 215 YAYDVRK---------MVDPVLVFDGH--------------------------------- 232
++V+ DP+ H
Sbjct: 148 KIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEG 207
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGG 289
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV
Sbjct: 208 NPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSVTGRKW 267
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
++ GSE N V++++++ E V
Sbjct: 268 VVS-GSEDNMVYIWNLQTKEIV 288
>gi|392568363|gb|EIW61537.1| coatomer beta' subunit [Trametes versicolor FP-101664 SS1]
Length = 862
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 24/244 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + I+F P++ TG +YN + + +H A++ +V + +
Sbjct: 13 SDRVKGIDFHPTEPWILTG-------LYNGTANIYNHDTGALIKTFEVAE------VPVR 59
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+++ P + V GS D+ V Y+ +KV FE R + + VL +G
Sbjct: 60 CVRFIPRKNWFVAGSDDFQLRVFNYNTHEKVAAFEAHPDYIRCL--TVHPTASIVL--TG 115
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD T++ WD +C+ T + + + +P + A+ C D+ + +
Sbjct: 116 SDDMTIRAWD-WDKQWRCIQTYE--GHTHYIMNIAVNPKDPNTFASSCLDRTVKMWSLGS 172
Query: 222 MVDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
P + H K V Y+ F D LVTA D +K+W+ ++T +GH NN
Sbjct: 173 -ASPNFTMEAHDKGVNYVEFYPGADRPYLVTASDDKTVKIWDYLSKSCVQTLEGHSNNVL 231
Query: 279 FVGL 282
F
Sbjct: 232 FAAF 235
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 82/223 (36%), Gaps = 20/223 (8%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + F G ++R++N + H KV + P + L P
Sbjct: 61 VRFIPRKNWFVAGSDDFQLRVFNYNT------------HEKVAAFE-AHPDYIRCLTVHP 107
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
S + GS D + +D +K+ + E + ++ + DP AS D T+
Sbjct: 108 TASIVLTGSDDM--TIRAWDWDKQWRCIQTYEGHTHYIMNIAVNPKDPNTFASSCLDRTV 165
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+MW G A V VEF+P +D K V
Sbjct: 166 KMWSL----GSASPNFTMEAHDKGVNYVEFYPGADRPYLVTASDDKTVKIWDYLSKSCVQ 221
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRT 269
+GH V + F ++ +++ G DG +KLWN R+ T
Sbjct: 222 TLEGHSNNVLFAAFHPNLPLIISGGEDGTVKLWNSGTYRLENT 264
>gi|150866779|ref|XP_001386490.2| TFIID and SAGA subunit [Scheffersomyces stipitis CBS 6054]
gi|149388035|gb|ABN68461.2| TFIID and SAGA subunit [Scheffersomyces stipitis CBS 6054]
Length = 782
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 112/267 (41%), Gaps = 34/267 (12%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG---ASGSDDGTM 167
R L SG D V + L+ + H + +W V +S LG A+ S D T
Sbjct: 517 NRYLLSGSEDKTVRLWSLDSYTALVSYKGHN-QPIWDVKFSP----LGHYFATASHDQTA 571
Query: 168 QMWDPRCDGGKCVSTVQP----SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
++W + P + + V CVEFHP S+ V G +DK +DV +
Sbjct: 572 RLW--------ATDHIYPLRIFAGHINDVDCVEFHP-NSNYVFTGSSDKTCRMWDV-QTG 621
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ V VF GH V + D L +AG D + +W+ R ++T KGH + L
Sbjct: 622 NCVRVFMGHTGPVNCMAVSPDGRWLASAGEDSVVNIWDAGTGRRLKTMKGH-GRSSIYSL 680
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWG------EPVWVHDFEPVTAAGSERGFVSSVCWRR 336
S R GG+L G N V V+DV+ EP E ++ GS+ + +
Sbjct: 681 SFSRDGGVLVSGGADNTVRVWDVKRDTNDAGPEPEMFSSVENGSSNGSDPEAARAKAVDK 740
Query: 337 VGEDECTLVAGGSDGLLHVFVGKKKPL 363
V + E + SD + F KK P+
Sbjct: 741 VNKKE---IIATSDHMTAYFT-KKTPV 763
>gi|428316794|ref|YP_007114676.1| (Myosin heavy-chain) kinase [Oscillatoria nigro-viridis PCC 7112]
gi|428240474|gb|AFZ06260.1| (Myosin heavy-chain) kinase [Oscillatoria nigro-viridis PCC 7112]
Length = 1486
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 127/305 (41%), Gaps = 33/305 (10%)
Query: 29 TTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSK 88
T + S S A ++ + F P +F+TGG +R++ D
Sbjct: 857 TETNLSESVFAKAFSTVNSVSFSPDGKLFSTGGRDGVVRLW---------------DAVS 901
Query: 89 VCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRRVW 146
+ C K S + G L S D + +D + F E+ R
Sbjct: 902 AKEILTCQAGKNSVHSVAFSSDGERLASDSVDNNIQLWDSHTGECLRTFTGHENSVR--- 958
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
SV +S L ASGS D T+++W+ G+C+ T++ ++++ V F P G L A
Sbjct: 959 SVAFSPDGEWL-ASGSYDKTIKLWNSHT--GECLRTLK--GHKNSISSVTFSPDGEWL-A 1012
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSR 265
+G D +D + + + F GH ++ + F D + L + D +KLWN +
Sbjct: 1013 SGSFDNTIKLWD-KHTGECLPTFTGHENSILSVAFSPDGEWLASGSYDKTIKLWNSHTGE 1071
Query: 266 VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV---HDFEPVTAA 322
+RT+ GH N+ V S G L GS N + ++D GE + H++ ++ A
Sbjct: 1072 CLRTFTGHENSVCSVAFS--PDGEWLVSGSFDNNIKLWDRHTGECLRTFTGHEYSLLSVA 1129
Query: 323 GSERG 327
S G
Sbjct: 1130 FSPDG 1134
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
++SV +S L SGS D T++ W+ G+C+ T+ R V V F P G L
Sbjct: 1251 IYSVAFSPNSKWL-VSGSYDNTIKFWNNHT--GECLRTLMGHEDR--VRSVAFSPDGEWL 1305
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVND 263
V+ G +D ++ + + F GH V + F D + + + D +KLWN +
Sbjct: 1306 VS-GSSDNTIKLWNSHSG-ECLRTFTGHNNWVNSVTFSFDGELIASGSDDYTIKLWNSHS 1363
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+RT+ GH N+ V S GS+ N + ++D GE
Sbjct: 1364 GECLRTFIGHNNSIYSVAFS--PENQQFASGSDDNTIKLWDGNTGE 1407
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 124/313 (39%), Gaps = 74/313 (23%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYIC-TPAKLS 101
+S+ + F P A+G + I+++N H+ C + +S
Sbjct: 955 NSVRSVAFSPDGEWLASGSYDKTIKLWN--------------SHTGECLRTLKGHKNSIS 1000
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKGDPVLGA 159
S+ + P G L SG +D + +D +P F E+ + SV +S L A
Sbjct: 1001 SVTFSP--DGEWLASGSFDNTIKLWDKHTGECLPTFTGHENS---ILSVAFSPDGEWL-A 1054
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++W+ G+C+ T + ++VC V F P G LV+ G D +D
Sbjct: 1055 SGSYDKTIKLWNSHT--GECLRTF--TGHENSVCSVAFSPDGEWLVS-GSFDNNIKLWD- 1108
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWN------------------ 260
R + + F GH ++ + F D L++A D +KLWN
Sbjct: 1109 RHTGECLRTFTGHEYSLLSVAFSPDGQCLISASHDNRIKLWNSHTGECFRTLTGYENAVI 1168
Query: 261 ---------------------VNDS---RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
+ DS + I+T+KGH N V S G L GS
Sbjct: 1169 SVVFSPDGQWFASGSSDNSIKIWDSTTRKCIKTFKGHENKVRSVAFS--PDGEWLVSGSL 1226
Query: 297 TNQVFVYDVRWGE 309
N+V +++ G+
Sbjct: 1227 DNKVKLWNSHTGK 1239
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 28/264 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVC-DYYICTPAKLSSLKWK 106
+ F P +G + K++++N H+ C +I + + S+ +
Sbjct: 1212 VAFSPDGEWLVSGSLDNKVKLWN--------------SHTGKCMKTFIGHESWIYSVAFS 1257
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P + + L SG YD + ++ + H R V SV +S L SGS D T
Sbjct: 1258 PNS--KWLVSGSYDNTIKFWNNHTGECLRTLMGHEDR-VRSVAFSPDGEWL-VSGSSDNT 1313
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV 226
+++W+ G+C+ T + + V V F F L+A+G D ++ + +
Sbjct: 1314 IKLWNSHS--GECLRTF--TGHNNWVNSVTF-SFDGELIASGSDDYTIKLWNSHSG-ECL 1367
Query: 227 LVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
F GH ++ + F + +G+D +KLW+ N +RT GH N V S
Sbjct: 1368 RTFIGHNNSIYSVAFSPENQQFASGSDDNTIKLWDGNTGECLRTLTGHENAVISVVFS-- 1425
Query: 286 RHGGLLGCGSETNQVFVYDVRWGE 309
G L GS N + +++V GE
Sbjct: 1426 PSGEWLASGSGDNTIKLWNVNKGE 1449
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 111 GRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
G+ SG D + +D K + F+ E+ +V SV +S L SGS D ++
Sbjct: 1176 GQWFASGSSDNSIKIWDSTTRKCIKTFKGHEN---KVRSVAFSPDGEWL-VSGSLDNKVK 1231
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+W+ GKC+ T S + V F P S + +G D ++ + +
Sbjct: 1232 LWNSHT--GKCMKTF--IGHESWIYSVAFSP-NSKWLVSGSYDNTIKFWN-NHTGECLRT 1285
Query: 229 FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH V + F D + LV+ +D +KLWN + +RT+ GH N N V S
Sbjct: 1286 LMGHEDRVRSVAFSPDGEWLVSGSSDNTIKLWNSHSGECLRTFTGHNNWVNSVTFSF--D 1343
Query: 288 GGLLGCGSETNQVFVYDVRWGE 309
G L+ GS+ + +++ GE
Sbjct: 1344 GELIASGSDDYTIKLWNSHSGE 1365
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Query: 154 DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
D L ASGSDD T+++W+ G+C+ T +++ V F P A+G D
Sbjct: 1343 DGELIASGSDDYTIKLWNSHS--GECLRTF--IGHNNSIYSVAFSPENQQF-ASGSDDNT 1397
Query: 214 AYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYK- 271
+D + + GH V + F + +G+ D +KLWNVN I+T
Sbjct: 1398 IKLWD-GNTGECLRTLTGHENAVISVVFSPSGEWLASGSGDNTIKLWNVNKGECIKTLTD 1456
Query: 272 GHVNNRNFVGLS 283
G N N G++
Sbjct: 1457 GLYENMNIAGVT 1468
>gi|428301486|ref|YP_007139792.1| serine/threonine protein kinase with WD40 repeats [Calothrix sp.
PCC 6303]
gi|428238030|gb|AFZ03820.1| serine/threonine protein kinase with WD40 repeats [Calothrix sp.
PCC 6303]
Length = 680
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 102/247 (41%), Gaps = 22/247 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L SG D VV + + + H + + +V S D + A GSDD T+++W
Sbjct: 451 GKILVSGGDDNVVKLWTMANGKELATLGGHS-QPIRAVAISP-DSKIVADGSDDATIKLW 508
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G V S+V + F P G+ L +AG DK ++V +
Sbjct: 509 DL----GSRREIVTLMGHTSSVHAIAFSPDGNILASAGV-DKTVKLWNV-STGQIITTLT 562
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH T+ + F D TL TA D +KLWN+ ++IRT GH V +
Sbjct: 563 GHEDTINSLAFSPDGKTLATASGDKTVKLWNLEKKQLIRTLTGHTAGVTSVAFN--PDEM 620
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
L S + +++ G + S G V S+ R D TLV+G
Sbjct: 621 TLTTASSDRTIKLWNFLTG--------RTIRTLTSHTGAVESIGLNR---DASTLVSGSE 669
Query: 350 DGLLHVF 356
D L ++
Sbjct: 670 DKTLRIW 676
>gi|393241665|gb|EJD49186.1| HET-E, partial [Auricularia delicata TFB-10046 SS5]
Length = 514
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR L S D + +D E P+ + V SV YS D SG+DD T+++W
Sbjct: 17 GRQLCSASDDRTIRRWDAESGAPVGKPMTGHSGEVNSVAYSP-DGTRIVSGADDNTVRLW 75
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+ + V +V CV F P G+ +A+G D +D + + + +
Sbjct: 76 DAST--GQSLG-VPLRGHVYSVWCVAFSPDGA-CIASGSEDNTIRLWD-SAIGAHLAILE 130
Query: 231 GHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH TV + F T LV+ D +++WN+ ++ T +GH + N V +S G
Sbjct: 131 GHTSTVYSLCFSPNRTHLVSGSWDKTVRIWNITTRQLEHTLEGHSDWVNSVAVS--PSGR 188
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
+ GS + ++D + GE V
Sbjct: 189 YIASGSNDKTIRIWDAQTGEAV 210
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 17/301 (5%)
Query: 12 AETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNI 71
A +N++ WD V + P +DS+ + F P +G + +R++++
Sbjct: 191 ASGSNDKTIRIWDAQTGEAVGA---PLTGNTDSMRSVAFSPDGRSVVSGSRDKIVRVWDL 247
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
+ +V V V + + S+ P G + S DG + +D +
Sbjct: 248 NGEI---SIVDAVSWHTVRGPFPSHESGNWSISVSP--DGHHICSAGDDGTIRRWDAKAG 302
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
P+ + +V SV YS D SG+DD T+++WD G+ + +
Sbjct: 303 TPMGKPMTGHSDKVNSVAYSP-DGTRIVSGADDCTVRLWDAST--GEALG-IPLEGHTVL 358
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V CV F P G+ +A+G DK +D + +GH + + F D L++
Sbjct: 359 VWCVAFSPDGA-CIASGSWDKTVRLWDSATGAH-LATLEGHSSLLYSLCFSPDRICLISG 416
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
D +++WNV ++ RT +GH V +S G + GS + ++D + GE
Sbjct: 417 SEDETVRIWNVETRKLERTLRGHSGWVRSVSVS--PSGRYIASGSHDKTIRIWDAQTGEA 474
Query: 311 V 311
V
Sbjct: 475 V 475
>gi|393241629|gb|EJD49150.1| HET-R [Auricularia delicata TFB-10046 SS5]
Length = 558
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 9/193 (4%)
Query: 120 DGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKC 179
D V+ +D E PI + V SV YS D SGSDD T+++WD G+
Sbjct: 34 DNDVLRWDAESGAPIGQPLTGHSGEVCSVAYSP-DSTRIVSGSDDCTVRLWD--VSTGEA 90
Query: 180 VSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYI 239
+ V V CV F P G+ +A+G D +D + +GH +V +
Sbjct: 91 LG-VPLEGHTDPVWCVAFSPDGA-CIASGSEDSTIRLWDSATGAH-LETLEGHEDSVYSL 147
Query: 240 RFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETN 298
F D LV+ D ++LWNV ++ RT +GH N V +S + + GS
Sbjct: 148 SFSPDRIHLVSGSADQTVRLWNVETRKLERTLRGHSNWVRSVAVS--QSARYIASGSFDK 205
Query: 299 QVFVYDVRWGEPV 311
+ ++D + GE V
Sbjct: 206 TIRIWDAQTGEAV 218
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 93/220 (42%), Gaps = 20/220 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
GR L S D + +D E I + V SV YS D SG+ D T++MW
Sbjct: 326 GRQLCSASDDYTIRRWDAESGAHIGKPMTGHSDSVRSVAYSP-DGTRIVSGASDRTVRMW 384
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+ + V V CV F P G+ +A+G D +D V + +
Sbjct: 385 DAST--GEALG-VPLEGHTDWVLCVAFSPDGA-CIASGSMDDTIRLWDSATGVH-LATLE 439
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH +V + F D LV+ D +++WNV ++ RT +GH N V +S G
Sbjct: 440 GHSSSVYSLCFSPDRIHLVSGSGDNNIRIWNVETRQLERTLRGHSGLINSVSMS--PSGR 497
Query: 290 LLGCGSETNQVFVYDVRWGEPV---------WVHD--FEP 318
+ GS + ++D + GE V WVH F P
Sbjct: 498 YIASGSSNKTIRIWDAQTGEAVGAPLTGHTDWVHSVAFSP 537
>gi|332252868|ref|XP_003275576.1| PREDICTED: WD repeat-containing protein 5B [Nomascus leucogenys]
Length = 330
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKLWDVR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCNGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PVSFVKFSPNGKYILTATLDNALKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
>gi|212722116|ref|NP_001132221.1| uncharacterized protein LOC100193655 [Zea mays]
gi|194693802|gb|ACF80985.1| unknown [Zea mays]
Length = 344
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 29/269 (10%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
+I ++F+P+ +V A+G + I ++ + H + ++ + K + L
Sbjct: 56 AIYCMKFNPAGTVIASGSHDKDIFLWYV--------------HGECKNFMVLRGHKNAIL 101
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ T G + S D V +D+E + + EH V S ++ P L SGSD
Sbjct: 102 DLQWTTDGTQIISASPDKTVRVWDVETGKQVKKMAEHSSF-VNSCCPARKWPPLVVSGSD 160
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
DGT ++WD R G +Q + + V F + G D +D+RK
Sbjct: 161 DGTAKLWDLRQRGA-----IQTLPDKYQITAVSFSEAADKVFTGGL-DNDVKWWDLRKN- 213
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN-- 276
+ GH+ +T ++ D L+T D LK+W++ ++R I+T GH +N
Sbjct: 214 ETTEYLKGHQDMITGMQLSPDGSYLLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFE 273
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+N + S + GS V+++D
Sbjct: 274 KNLLKCSWSPDNRKVTAGSADRMVYIWDT 302
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDV 244
+ +SA+ C++F+P G +++A+G DK + + V +V GH+ + +++ D
Sbjct: 51 TGHQSAIYCMKFNPAG-TVIASGSHDKDIFLWYVHGECKNFMVLRGHKNAILDLQWTTDG 109
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+++A D +++W+V + ++ H
Sbjct: 110 TQIISASPDKTVRVWDVETGKQVKKMAEH 138
>gi|358057890|dbj|GAA96135.1| hypothetical protein E5Q_02796 [Mixia osmundae IAM 14324]
Length = 914
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 34/246 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + I+F P++ G ++ I+N D + + T +
Sbjct: 15 SERVKSIDFHPTEPWVIAGLYTGRVVIWN-------------TDTGALVKTFEVTEVPVR 61
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV----- 156
+++ + + GS D+ + Y+ ++K+ FE DY + V
Sbjct: 62 CVRFITRKNWFICGSDDFHLRIFNYNTQEKIAAFEAHP---------DYIRCLAVHPTQS 112
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L +GSDD T+++WD + KCV + + + F+P S+ A+ C D+
Sbjct: 113 LVLTGSDDMTIKLWDWEKNW-KCVQMFE--GHTHYIMNIAFNPKDSNTFASACLDRTVKV 169
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ + + D H K V Y+ + D LVT G D +K+W+ + I+T +GH
Sbjct: 170 WSLGAPM-ANFTLDAHDKGVNYVEYYHGGDKPYLVTTGDDRLVKIWDYHSKSCIQTLEGH 228
Query: 274 VNNRNF 279
+N +F
Sbjct: 229 TSNVSF 234
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDD +++++ P R C+ HP SLV G D +D
Sbjct: 75 GSDDFHLRIFNYNTQEKIAAFEAHPDYIR----CLAVHP-TQSLVLTGSDDMTIKLWDWE 129
Query: 221 KMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
K V +F+GH + I F D +T +A D +K+W++ T H N
Sbjct: 130 KNWKCVQMFEGHTHYIMNIAFNPKDSNTFASACLDRTVKVWSLGAPMANFTLDAHDKGVN 189
Query: 279 FVGLSVWRHGG 289
+V + HGG
Sbjct: 190 YVE---YYHGG 197
>gi|296420840|ref|XP_002839976.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636184|emb|CAZ84167.1| unnamed protein product [Tuber melanosporum]
Length = 334
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 143/316 (45%), Gaps = 40/316 (12%)
Query: 8 QQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSI-----GV--IEFDPSDSVFATG 60
Q+P + E+A D + ++ + PN A++ ++ GV ++F P + A+
Sbjct: 4 QEPSSSVQPEQA----DIKMTDPSNARTVPNYALTYTLKGHKMGVSSVKFSPDGAWLASC 59
Query: 61 GIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYD 120
+ I++++ K+ + + + A +S + W P + L SG D
Sbjct: 60 SADQTIKVWHAKTGKYEQTLEGHM-------------AGISDIDWAPDS--LTLVSGSDD 104
Query: 121 GVVMEYDL-EKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGK 178
+ +D+ K+ R H V++V +S +G+ V ASGS D +++WD R GK
Sbjct: 105 KTLRLWDVVSGKMLRLLRGHHNA--VYTVAFSPRGNIV--ASGSYDEAVRLWDIR--SGK 158
Query: 179 CVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTY 238
C+ T+ A V V F+ G+ +V+ D +DV + + V
Sbjct: 159 CMKTL--PAHGDPVSGVHFNRDGTMIVSCS-HDGLIRIWDVTTGQCLRTLVEEDNAPVMA 215
Query: 239 IRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLLGCGS 295
++F + AGT D C++LW+ + + ++TY GH N++ F + + GS
Sbjct: 216 VKFSPNGKYLLAGTQDSCVRLWDYHRGKCLKTYMGHKNDKYSIFSTFIIANGSCFVMAGS 275
Query: 296 ETNQVFVYDVRWGEPV 311
E + VF++D++ E V
Sbjct: 276 ENSDVFIWDIQTKEIV 291
>gi|186687001|ref|YP_001870390.1| WD-40 repeat-containing protein [Nostoc punctiforme PCC 73102]
gi|186469625|gb|ACC85422.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
Length = 1182
Score = 61.2 bits (147), Expect = 8e-07, Method: Composition-based stats.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 20/197 (10%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
RVWSV +S L AS S+D ++++WD G+C+ T+Q +SR V CV + G
Sbjct: 817 RVWSVAFSPNGKTL-ASASEDQSVKLWD--VTTGRCLKTLQGYSSR--VWCVAVNANGQL 871
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVN 262
L A +K +D+ + GH + + F +T L +AG DG ++LW+
Sbjct: 872 LAAN--TNKTLRIWDI-STAKCIHTLHGHTREICGTVFSSHETILASAGADGTIRLWDTI 928
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAA 322
+ +RT + N + L++ G L + ++D++ G E +
Sbjct: 929 TGKCLRTLQ---VNGWILSLAMSPQGNALATANTDTMAKIWDIKTG--------ECIKTL 977
Query: 323 GSERGFVSSVCWRRVGE 339
G+V SV W G+
Sbjct: 978 EGHTGWVFSVAWSPNGQ 994
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 71/309 (22%), Positives = 119/309 (38%), Gaps = 76/309 (24%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKS-----VLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
I F P + A+G +++++I + VL H I P SS
Sbjct: 652 ISFSPDGKILASGSGDHTVKLWDINTGQLLKVLKGH-------------INIVRPVIFSS 698
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
G+++ SG D + +D++ + + H + VWSV S+ +L ASGS
Sbjct: 699 -------DGKIIASGSEDQTIKIWDVDSGEYLQTLEGHLAQ-VWSVSLSEDGKIL-ASGS 749
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+++WD G+C +T+Q + V V F P G S+V AG + +D+ K
Sbjct: 750 ADKTVKLWD--VSTGECRTTLQGN-QIDGVWSVSFSPSGESVVVAGEVPVISL-WDI-KT 804
Query: 223 VDPVLVFDGHRKTVTYIRF------------------LDVDT------------------ 246
+ + F GH V + F DV T
Sbjct: 805 GECIQTFLGHIGRVWSVAFSPNGKTLASASEDQSVKLWDVTTGRCLKTLQGYSSRVWCVA 864
Query: 247 ------LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
L+ A T+ L++W+++ ++ I T GH R G H +L +
Sbjct: 865 VNANGQLLAANTNKTLRIWDISTAKCIHTLHGH--TREICGTVFSSHETILASAGADGTI 922
Query: 301 FVYDVRWGE 309
++D G+
Sbjct: 923 RLWDTITGK 931
Score = 52.4 bits (124), Expect = 4e-04, Method: Composition-based stats.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 14/209 (6%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
SL P G L + + D + +D++ I + H G V+SV +S L S
Sbjct: 944 SLAMSP--QGNALATANTDTMAKIWDIKTGECIKTLEGHTGW-VFSVAWSPNGQFLATS- 999
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
D +++WD + +C+ T++ A V +++ P G +L++ G D +D+
Sbjct: 1000 -SDRCIKLWDVKT--WQCIKTLE--AHSGWVYSLDWSPDGQTLLS-GSFDLSLKLWDINT 1053
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ GH K V +F ++ + G DG +KLWN N +RT GH +
Sbjct: 1054 G-NCQQTLHGHTKIVLGAKFHPQGNIIASTGQDGTIKLWNSNTGECLRTLIGHAD--WIW 1110
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
++ +G L GS+ + ++DV GE
Sbjct: 1111 AIAFHPNGQTLASGSQDETIKLWDVETGE 1139
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 25/261 (9%)
Query: 49 EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPG 108
+F P+ V AT I+I+NI + H + D SK + S+ + P
Sbjct: 611 KFSPNGKVLATCSDDGVIKIWNINTGKCHH---TLQDDSK----------RSWSISFSP- 656
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
G++L SG D V +D+ + H V V +S ++ ASGS+D T++
Sbjct: 657 -DGKILASGSGDHTVKLWDINTGQLLKVLKGHINI-VRPVIFSSDGKII-ASGSEDQTIK 713
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD D G+ + T++ ++ V V G ++A+G ADK +DV +
Sbjct: 714 IWD--VDSGEYLQTLEGHLAQ--VWSVSLSEDGK-ILASGSADKTVKLWDVSTGECRTTL 768
Query: 229 FDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
V + F +++V AG + LW++ I+T+ GH+ V S +
Sbjct: 769 QGNQIDGVWSVSFSPSGESVVVAGEVPVISLWDIKTGECIQTFLGHIGRVWSVAFS--PN 826
Query: 288 GGLLGCGSETNQVFVYDVRWG 308
G L SE V ++DV G
Sbjct: 827 GKTLASASEDQSVKLWDVTTG 847
Score = 38.9 bits (89), Expect = 4.4, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ W P +G+ L + D + +D++ I + H G V+S+D+S L SG
Sbjct: 986 SVAWSP--NGQFLATSS-DRCIKLWDVKTWQCIKTLEAHSGW-VYSLDWSPDGQTL-LSG 1040
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC-ADKKAYAYDVR 220
S D ++++WD + G C T+ V +FHP G+ + + G K + +
Sbjct: 1041 SFDLSLKLWD--INTGNCQQTLH--GHTKIVLGAKFHPQGNIIASTGQDGTIKLWNSNTG 1096
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+ + ++ GH + I F + TL + D +KLW+V ++T +
Sbjct: 1097 ECLRTLI---GHADWIWAIAFHPNGQTLASGSQDETIKLWDVETGECLQTLR 1145
>gi|408829845|ref|ZP_11214735.1| hypothetical protein SsomD4_21810 [Streptomyces somaliensis DSM
40738]
Length = 351
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 110/257 (42%), Gaps = 43/257 (16%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKV----PIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
+G VL + +D V+ +DL V P E VW+ YS D L A+ + D
Sbjct: 4 TGTVLATAGFDQSVVLWDLGGPVLSARPFTE--------VWTTAYSP-DGRLLATANADH 54
Query: 166 TMQMWDPRCDGGKCVSTVQPSASR---SAVCCVEFHPFGSSLVAAGCADKKAYAYDV--R 220
T+++WD V Q +A V V F P G L +AG +D +DV R
Sbjct: 55 TVRLWD-------AVRRRQVAALTGHDETVFSVAFAPDGRVLASAG-SDGTVRLWDVPGR 106
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
++V V GH V + F D TL ++G D ++LW+V R++RT GH + N
Sbjct: 107 RLVK---VLTGHTGEVFSVAFAPDGRTLASSGADRTVRLWDVPGRRLVRTLTGHADYVNR 163
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGE 339
V S G L + V ++DV P A + G +VC
Sbjct: 164 VVFSP--DGRTLASAGDDLTVRLWDVAERRP-----------AATLAGHTGAVCGLAFSS 210
Query: 340 DECTLVAGGSDGLLHVF 356
D TL + G+DG + ++
Sbjct: 211 DGRTLASSGNDGSVRLW 227
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 106/257 (41%), Gaps = 26/257 (10%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
+ P + AT +R+++ + V A+ H + P
Sbjct: 40 YSPDGRLLATANADHTVRLWD---AVRRRQVAALTGHDETVFSVAFAP------------ 84
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
GRVL S DG V +D+ + + H G V+SV ++ L +SG+D T+++
Sbjct: 85 DGRVLASAGSDGTVRLWDVPGRRLVKVLTGHTGE-VFSVAFAPDGRTLASSGADR-TVRL 142
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD G + V T+ A V V F P G +L +AG D +DV + P
Sbjct: 143 WD--VPGRRLVRTLTGHAD--YVNRVVFSPDGRTLASAG-DDLTVRLWDVAER-RPAATL 196
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V + F D TL ++G DG ++LW+V R+ GH V S G
Sbjct: 197 AGHTGAVCGLAFSSDGRTLASSGNDGSVRLWDVPGQRLDTVLTGHTGAVRDVAFSP--GG 254
Query: 289 GLLGCGSETNQVFVYDV 305
GLL V ++++
Sbjct: 255 GLLASSGNDRTVRLWEL 271
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+ G R +R++++ + V + H+ + + +P
Sbjct: 122 VAFAPDGRTLASSGADRTVRLWDVPGRRL---VRTLTGHADYVNRVVFSP---------- 168
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR L S D V +D+ ++ P H G V + +S L +SG +DG++
Sbjct: 169 --DGRTLASAGDDLTVRLWDVAERRPAATLAGHTGA-VCGLAFSSDGRTLASSG-NDGSV 224
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD G+ + TV + AV V F P G L+A+ D+ +++
Sbjct: 225 RLWDVP---GQRLDTVL-TGHTGAVRDVAFSP-GGGLLASSGNDRTVRLWELPGRRH-WA 278
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
GH V + F D +L + GTDG ++LW+++
Sbjct: 279 TLTGHTDAVQGVVFAPDGRSLASGGTDGTVRLWDLD 314
>gi|401399505|ref|XP_003880565.1| het-R, related [Neospora caninum Liverpool]
gi|325114976|emb|CBZ50532.1| het-R, related [Neospora caninum Liverpool]
Length = 515
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 14/234 (5%)
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
++ P V +G YDG V+ +DLEK+ +++ H + V S +PV+ S SD
Sbjct: 217 EFDPKNPKSVTATGGYDGNVILFDLEKQKTLYKLTGH-TKAVRSTKLHVSEPVV-ISASD 274
Query: 164 DGTMQMWDPRCDGG-KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY-DVR- 220
D T+++W DG K +T++ R V C+ HP G+ A CA K++A+ D++
Sbjct: 275 DKTVRIWRASGDGPYKTAATIR--KHRGEVTCLSLHPLGNYF--ASCAADKSWAFSDIQD 330
Query: 221 -KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ + K V++ D L G DG + +W++ KGH N
Sbjct: 331 GRCLQMQRNLSCQYKCVSF--HPDGMILGGGGVDGSVHIWDMKGLAYRAALKGHGGPINQ 388
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVC 333
+ S +G L S V ++D+R D ++ + + C
Sbjct: 389 LAFS--ENGYYLATASSDGTVRLWDLRKSLSFQTIDMNEANPGEGDKQKLEAAC 440
>gi|62089180|dbj|BAD93034.1| PRPF4 protein variant [Homo sapiens]
Length = 537
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T +++ A V + DP D A+ ++++++ S D PV + H
Sbjct: 281 LHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDS---DEPVADIEGH 337
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+ +++ + W P SGR LG+ YD +DLE + I ++ H V+
Sbjct: 338 T----------VRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGH-SMGVY 384
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + + D L +G D ++WD R G+C+ ++ + + F P G +A
Sbjct: 385 DIAFHQ-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGYH-IA 438
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDS 264
G D +D+R+ V H+ VT ++F + + L+T D K+W
Sbjct: 439 TGSGDNTCKVWDLRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 497
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 498 SPLKTLAGHEG--KVMGLDISSDGQLIATCS 526
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D+ +D
Sbjct: 312 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGR-FLGTTCYDRSWRLWD 366
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 367 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 423
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 424 EIYGINFSPNGYHIATGSGDNTCKVWDLR 452
>gi|260824758|ref|XP_002607334.1| hypothetical protein BRAFLDRAFT_276603 [Branchiostoma floridae]
gi|229292681|gb|EEN63344.1| hypothetical protein BRAFLDRAFT_276603 [Branchiostoma floridae]
Length = 347
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 128/317 (40%), Gaps = 45/317 (14%)
Query: 31 VSSSSSPNAAVSDSIGVI---EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHS 87
SS +P +S G I +F P ++ A+G R I ++N+ +
Sbjct: 42 TSSLQAPIMLLSGHEGEIYAAKFHPEGNLLASGSFDRNIFLWNV--------------YG 87
Query: 88 KVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWS 147
+Y + + ++ + T G L S D V +D+E I H V S
Sbjct: 88 DCENYAVLNGHSGAIMELQFSTDGSTLFSASTDKTVGLFDVETGARIKRLKGHS-TFVNS 146
Query: 148 VDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAA 207
S+ P + SGSDD T+++WD R G + Q + V V F+ +++
Sbjct: 147 CHPSRRGPQMVVSGSDDSTIRLWDTRKKG-----SAQTFQNTYQVTSVSFNDTSDQILSG 201
Query: 208 GCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN---- 262
G D +D+RK D + GH TVT + D L++ D +++W+V
Sbjct: 202 GI-DNDIKCWDLRKN-DVIYKMRGHMDTVTGLSLSKDGSYLLSCAMDNTVRIWDVRPFAP 259
Query: 263 DSRVIRTYKG--HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD-----VRWGEP----- 310
R ++ ++G H +N + + G + GS V+V+D + + P
Sbjct: 260 QERCVKIFQGNQHSFEKNLIRCNWSPDGSKITAGSADRFVYVWDTTTRRILYKLPGHDGS 319
Query: 311 ---VWVHDFEPVTAAGS 324
V H +EP+ + S
Sbjct: 320 INEVDFHPYEPIVLSAS 336
>gi|24431950|ref|NP_004688.2| U4/U6 small nuclear ribonucleoprotein Prp4 isoform 1 [Homo sapiens]
gi|20514971|sp|O43172.2|PRP4_HUMAN RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp4; AltName:
Full=PRP4 homolog; Short=hPrp4; AltName: Full=U4/U6
snRNP 60 kDa protein; AltName: Full=WD splicing factor
Prp4
gi|16306787|gb|AAH01588.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Homo sapiens]
gi|119607768|gb|EAW87362.1| PRP4 pre-mRNA processing factor 4 homolog (yeast), isoform CRA_a
[Homo sapiens]
gi|157928356|gb|ABW03474.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [synthetic
construct]
gi|157928994|gb|ABW03782.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [synthetic
construct]
gi|410206996|gb|JAA00717.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410206998|gb|JAA00718.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410207000|gb|JAA00719.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410287674|gb|JAA22437.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
Length = 522
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T +++ A V + DP D A+ ++++++ S D PV + H
Sbjct: 266 LHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDS---DEPVADIEGH 322
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+ +++ + W P SGR LG+ YD +DLE + I ++ H V+
Sbjct: 323 T----------VRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGH-SMGVY 369
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + + D L +G D ++WD R G+C+ ++ + + F P G +A
Sbjct: 370 DIAFHQ-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGYH-IA 423
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDS 264
G D +D+R+ V H+ VT ++F + + L+T D K+W
Sbjct: 424 TGSGDNTCKVWDLRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 482
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 483 SPLKTLAGHEG--KVMGLDISSDGQLIATCS 511
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D+ +D
Sbjct: 297 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGR-FLGTTCYDRSWRLWD 351
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 352 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 408
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 409 EIYGINFSPNGYHIATGSGDNTCKVWDLR 437
>gi|349732206|ref|NP_001231855.1| U4/U6 small nuclear ribonucleoprotein Prp4 isoform 2 [Homo sapiens]
gi|332832669|ref|XP_520198.3| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Pan
troglodytes]
gi|397526363|ref|XP_003833097.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Pan
paniscus]
gi|426362736|ref|XP_004048511.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4 [Gorilla
gorilla gorilla]
gi|13938549|gb|AAH07424.1| PRP4 pre-mRNA processing factor 4 homolog (yeast) [Homo sapiens]
gi|45861374|gb|AAS78572.1| 60 kDa U4/U6 snRNP-specific spliceosomal protein [Homo sapiens]
gi|119607769|gb|EAW87363.1| PRP4 pre-mRNA processing factor 4 homolog (yeast), isoform CRA_b
[Homo sapiens]
gi|307685355|dbj|BAJ20608.1| PRP4 pre-mRNA processing factor 4 homolog [synthetic construct]
gi|410256154|gb|JAA16044.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410256156|gb|JAA16045.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410256158|gb|JAA16046.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410256160|gb|JAA16047.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410256162|gb|JAA16048.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
gi|410330629|gb|JAA34261.1| PRP4 pre-mRNA processing factor 4 homolog [Pan troglodytes]
Length = 521
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T +++ A V + DP D A+ ++++++ S D PV + H
Sbjct: 265 LHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDS---DEPVADIEGH 321
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+ +++ + W P SGR LG+ YD +DLE + I ++ H V+
Sbjct: 322 T----------VRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGH-SMGVY 368
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + + D L +G D ++WD R G+C+ ++ + + F P G +A
Sbjct: 369 DIAFHQ-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGYH-IA 422
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDS 264
G D +D+R+ V H+ VT ++F + + L+T D K+W
Sbjct: 423 TGSGDNTCKVWDLRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 481
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 482 SPLKTLAGHEG--KVMGLDISSDGQLIATCS 510
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D+ +D
Sbjct: 296 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGR-FLGTTCYDRSWRLWD 350
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 351 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 407
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 408 EIYGINFSPNGYHIATGSGDNTCKVWDLR 436
>gi|358459037|ref|ZP_09169240.1| serine/threonine protein kinase with WD40 repeats [Frankia sp. CN3]
gi|357077693|gb|EHI87149.1| serine/threonine protein kinase with WD40 repeats [Frankia sp. CN3]
Length = 681
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 40/241 (16%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D++ + F P S ATGG + + +++I+ P+ ++ + +
Sbjct: 464 TDAVRAVTFSPDGSTLATGGRDKTVHLWDIRDPADPRPLGQPLEGNT---------EDVV 514
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR-------VWSVDYSKGD 154
SL + P G+ L SG +D V +DL + ER G+ VW+V ++ +
Sbjct: 515 SLAFSP--DGKTLASGGWDHSVHLWDLTDR----ERPRALGQPLRGHTDVVWTVGFTPDN 568
Query: 155 PVLGASGSDDGTMQMWD------PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
L +GS D T+++WD P+ G + R AV C G SL+A G
Sbjct: 569 RTL-ITGSADRTVRLWDLADRNTPKQLGAPL------TGYRDAVWCGALSSDG-SLLAIG 620
Query: 209 CADKKAYAYDVRKMVDPVLV---FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDS 264
AD +D+ PV + D H V I F D LVTAG+D ++LW + +
Sbjct: 621 SADGTVRFWDISDPAKPVALEPPLDTHHGKVESIVFSPDGTLLVTAGSDSTIRLWRLGTA 680
Query: 265 R 265
+
Sbjct: 681 Q 681
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKV-------PIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
GR L SG +DG V +++ P R + R V S +L AS S
Sbjct: 384 GRTLASGGFDGAVRLWNVADPAHAAYLTGPQTPRKDAAVR---GVAVSPDGRIL-ASASL 439
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
T+ +W+ + QP AV V F P GS+L A G DK + +D+R
Sbjct: 440 GSTVLLWN-ITNPAVPARLGQPLPHTDAVRAVTFSPDGSTL-ATGGRDKTVHLWDIRDPA 497
Query: 224 DPVLV---FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT----YKGHVN 275
DP + +G+ + V + F D TL + G D + LW++ D R +GH +
Sbjct: 498 DPRPLGQPLEGNTEDVVSLAFSPDGKTLASGGWDHSVHLWDLTDRERPRALGQPLRGHTD 557
>gi|328772693|gb|EGF82731.1| hypothetical protein BATDEDRAFT_9537 [Batrachochytrium
dendrobatidis JAM81]
Length = 367
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 146 WSVDYSKGDPVLG--ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
W V P G ASGS D ++WDPR GK +ST+ ++ + V+++ G+
Sbjct: 153 WDVKCLDWHPTKGILASGSKDNLAKLWDPRT--GKSLSTLH--GHKNTIMQVQWNKNGNW 208
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNV 261
L+ A C D+ A YD+R M + + +F GH++ V IR+ V + V+ G +G + W V
Sbjct: 209 LLTA-CRDQLARVYDIRTMKE-LQIFKGHKREVQSIRWHPVHENMFVSGGWEGSMIFWEV 266
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSE 296
+ T + H ++ + L G +L GS
Sbjct: 267 GSDTPLATME-HAHDNSVYSLDWHPLGHMLVSGSN 300
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+G+ G MW+ + + SA R+ + S AD
Sbjct: 44 TGASSGEFTMWNGLTFNFETILQAHDSAVRAL-------KWSHSDTWMISADDSGIIKYW 96
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ ++ + +F GH++TV + F D+ + DG +K+W+ D+ V RT GH +
Sbjct: 97 QSSMNNLKMFQGHKETVRDLTFSPTDSKFASCSDDGTIKIWSFADAVVERTLTGH--GWD 154
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
L G+L GS+ N ++D R G+ +
Sbjct: 155 VKCLDWHPTKGILASGSKDNLAKLWDPRTGKSL 187
>gi|168064652|ref|XP_001784274.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664194|gb|EDQ50923.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 307
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 15/208 (7%)
Query: 110 SGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
SG ++ + +D + YD LE++V + G +++V +S L + S D T
Sbjct: 63 SGNLVATASWDHLCRVYDVHLEEEVAVLSGHLLG---LYAVKFSPAKRDLVGTVSSDQTC 119
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ D G+C+ ++ V + F P G+ L+A D + +D K + V
Sbjct: 120 RLWN--TDTGECLRVLE--GHTDEVNGLSFKP-GTHLLATASDDATSMIWDAEKGIS-VT 173
Query: 228 VFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
GHR V + F + + TA D KLW+ S ++T +GH+ + +G+ +
Sbjct: 174 TLKGHRHGVYGVCFQPSGGNLVATASFDFTAKLWDPRTSEDVQTLRGHL--EDVIGVDID 231
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWV 313
G L GS+ V+D+R G P+ V
Sbjct: 232 DSGMYLATGSDDKTCRVWDLRMGHPIVV 259
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 58/149 (38%), Gaps = 8/149 (5%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L A+ SDD T +WD K +S R V V F P G +LVA D A
Sbjct: 151 LLATASDDATSMIWDAE----KGISVTTLKGHRHGVYGVCFQPSGGNLVATASFDFTAKL 206
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+D R D V GH + V + D L T D ++W++ I + H
Sbjct: 207 WDPRTSED-VQTLRGHLEDVIGVDIDDSGMYLATGSDDKTCRVWDLRMGHPIVVLQAHSG 265
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
V S +G LL S V ++D
Sbjct: 266 EVKRVVFS--PYGKLLATTSGDTTVRLFD 292
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 99 KLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI--FERDEHGGRRVWSVDYSKGDPV 156
+++ L +KPGT +L + D M +D EK + + + HG V+ V +
Sbjct: 139 EVNGLSFKPGT--HLLATASDDATSMIWDAEKGISVTTLKGHRHG---VYGVCFQPSGGN 193
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L A+ S D T ++WDPR + V T++ V V+ G L A G DK
Sbjct: 194 LVATASFDFTAKLWDPRTS--EDVQTLR--GHLEDVIGVDIDDSGMYL-ATGSDDKTCRV 248
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWN 260
+D+R M P++V H V + F L+ T D ++L++
Sbjct: 249 WDLR-MGHPIVVLQAHSGEVKRVVFSPYGKLLATTSGDTTVRLFD 292
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 14/146 (9%)
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGT 252
+ +P G+ LVA D YDV + + V V GH + ++F D + T +
Sbjct: 58 IAVNPSGN-LVATASWDHLCRVYDVH-LEEEVAVLSGHLLGLYAVKFSPAKRDLVGTVSS 115
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
D +LWN + +R +GH + N GLS LL S+ ++D G
Sbjct: 116 DQTCRLWNTDTGECLRVLEGHTDEVN--GLSFKPGTHLLATASDDATSMIWDAEKG---- 169
Query: 313 VHDFEPVTAAGSERGFVSSVCWRRVG 338
VT R V VC++ G
Sbjct: 170 ----ISVTTLKGHRHGVYGVCFQPSG 191
>gi|2708305|gb|AAC51925.1| U4/U6 small nuclear ribonucleoprotein hPrp4 [Homo sapiens]
Length = 522
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T +++ A V + DP D A+ ++++++ S D PV + H
Sbjct: 266 LHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDS---DEPVADIEGH 322
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+ +++ + W P SGR LG+ YD +DLE + I ++ H V+
Sbjct: 323 T----------VRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGH-SMGVY 369
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + + D L +G D ++WD R G+C+ ++ + + F P G +A
Sbjct: 370 DIAFHQ-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGYH-IA 423
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDS 264
G D +D+R+ V H+ VT ++F + + L+T D K+W
Sbjct: 424 TGSGDNTCKVWDLRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 482
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 483 SPLKTLAGHEG--KVMGLDISSDGQLIATCS 511
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D+ +D
Sbjct: 297 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGR-FLGTTCYDRSWRLWD 351
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 352 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 408
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 409 EIYGINFSPNGYHIATGSGDNTCKVWDLR 437
>gi|328766855|gb|EGF76907.1| hypothetical protein BATDEDRAFT_92189 [Batrachochytrium
dendrobatidis JAM81]
Length = 814
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 43/244 (17%)
Query: 53 SDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGR 112
++S A +IRIY+I+ D V HS D +C P ++G+
Sbjct: 332 TESHLAVVTNTEQIRIYDIEKRDCD----IVFGHS---DIVLCVV---------PFSNGK 375
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDY------------SKGDPVLGAS 160
++ SG D M + + R H G + D S G ++ +
Sbjct: 376 LMASGSKDHTAMLWSVNPTADPDMRYVHLGTCIGHTDSVTAVAAPCSNMSSAGQFII--T 433
Query: 161 GSDDGTMQMWD----PRCDGG--KCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
GS D T++MW+ +C K + A + + P + L +G D+ A
Sbjct: 434 GSQDRTIKMWEIGDIAKCGNSETKFKAKYTFQAHDKDIQSIAVAP-NNKLFVSGALDRTA 492
Query: 215 YAYDVRKMVDPVLV--FDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYK 271
+ V D LV F GH++ + ++F +D +V TA TD +KLWN+ND IRT++
Sbjct: 493 KMWSV---ADGALVGTFKGHKRGIWCVKFSPIDQIVATASTDKTIKLWNINDFTCIRTFE 549
Query: 272 GHVN 275
GH+N
Sbjct: 550 GHLN 553
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 9/148 (6%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L SG+ D T +MW G V T + + + CV+F P +VA DK
Sbjct: 482 LFVSGALDRTAKMW--SVADGALVGTFK--GHKRGIWCVKFSPI-DQIVATASTDKTIKL 536
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+++ + F+GH TV + FL LV+ G+DG +KLW + D+ + T H
Sbjct: 537 WNINDFT-CIRTFEGHLNTVLNVSFLTAGMQLVSTGSDGLVKLWTIKDNECVATLDNH-- 593
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVY 303
N GL+V R + GS + + ++
Sbjct: 594 NDRIWGLAVDRSEQHVLSGSSDSTITIW 621
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP--VLGASGSDDGT 166
++ ++ +G D V +D+++ HGG + SV +P +L SGSDD
Sbjct: 114 STSTLVSTGSADSTVKVWDVDRGYCTHNFKGHGG--IVSVVKFHPNPKNLLLVSGSDDCK 171
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVD 224
+ +WD + C++ + ++ S + ++F P G L + G DK ++++ ++
Sbjct: 172 ICLWD--LNSRLCIAAL--TSHVSVIRGLDFSPDGEFLFS-GSRDKVINKWNLKALELTK 226
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
+ +F+ + ++ + + + T G G ++LW++ +I + +N+ + + +
Sbjct: 227 TIPIFES-IEALSIVNHNNTHVICTGGDKGIVRLWDMETGELILAQEKDINSHHQISGMI 285
Query: 285 WRHG--GLLGCGSETNQVFVYDVR 306
W ++ S+ N +F YDV
Sbjct: 286 WSESTQTIVAVTSDQNILF-YDVN 308
>gi|23199987|ref|NP_061942.2| WD repeat-containing protein 5B [Homo sapiens]
gi|74762455|sp|Q86VZ2.1|WDR5B_HUMAN RecName: Full=WD repeat-containing protein 5B
gi|27695090|gb|AAH43494.1| WD repeat domain 5B [Homo sapiens]
gi|48146675|emb|CAG33560.1| WDR5B [Homo sapiens]
gi|119599891|gb|EAW79485.1| WD repeat domain 5B [Homo sapiens]
gi|189054800|dbj|BAG37626.1| unnamed protein product [Homo sapiens]
gi|261861516|dbj|BAI47280.1| WD repeat domain 5B [synthetic construct]
Length = 330
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKLWDVR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
>gi|48146327|emb|CAG33386.1| PRPF4 [Homo sapiens]
Length = 521
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T +++ A V + DP D A+ ++++++ S D PV + H
Sbjct: 265 LHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDS---DEPVADIEGH 321
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+ +++ + W P SGR LG+ YD +DLE + I ++ H V+
Sbjct: 322 T----------VRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGH-SMGVY 368
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + + D L +G D ++WD R G+C+ ++ + + F P G +A
Sbjct: 369 DIAFHQ-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGYH-IA 422
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDS 264
G D +D+R+ V H+ VT ++F + + L+T D K+W
Sbjct: 423 TGSGDNTCKVWDLRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 481
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 482 SPLKTLAGHEG--KVMGLDISSDGQLIATCS 510
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D+ +D
Sbjct: 296 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGR-FLGTTCYDRSWRLWD 350
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 351 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 407
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 408 EIYGINFSPNGYHIATGSGDNTCKVWDLR 436
>gi|169621913|ref|XP_001804366.1| hypothetical protein SNOG_14169 [Phaeosphaeria nodorum SN15]
gi|160704650|gb|EAT78406.2| hypothetical protein SNOG_14169 [Phaeosphaeria nodorum SN15]
Length = 430
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 112/276 (40%), Gaps = 31/276 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYY-ICTPAKL 100
S I FDP+ A+G + R I ++ S C+ Y I T K
Sbjct: 66 SGEIFAARFDPTGQFIASGSMDRSILLWR---------------SSGSCENYGILTGHKQ 110
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
+ L +VL S D + +D+E I H + +D SK + S
Sbjct: 111 AVLDLHWSRDSKVLFSASADMHLASWDVETGERIRRHPGHE-EVINCMDVSKRGEEMLVS 169
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
GSDDG++ +WD R ++ +Q +A+C E G+ L G D +D+R
Sbjct: 170 GSDDGSIGIWDTRTK--DAITYIQTDFPITAICLAE---AGNELFTGGI-DNDIKVWDLR 223
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHV- 274
K + GH TVT ++ D TL++ D ++ W+V R ++TY G
Sbjct: 224 KQAVTYTLL-GHTDTVTSLQISPDNQTLLSNAHDSTVRTWDVRPFAPADRRVQTYDGAPT 282
Query: 275 -NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
RN + S G + GS V +++ + G+
Sbjct: 283 GQERNLLKASWDSTGAKIAAGSGDQSVAIWETKTGK 318
>gi|154421491|ref|XP_001583759.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918002|gb|EAY22773.1| hypothetical protein TVAG_477020 [Trichomonas vaginalis G3]
Length = 519
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 30/286 (10%)
Query: 80 VVAVVDHSKVCDYYICTPAKL--------SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
V ++V++ K C P L ++ PGT + G D + +V +DL++K
Sbjct: 208 VKSIVNNFKPAILPSCVPKSLPVEHKGPIKTISVIPGTDTFISGGADSNVIV--WDLKRK 265
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
+ H GR VWSV K P + AS DGT+++W+ + + T+Q +
Sbjct: 266 MKSCVLKGHTGR-VWSVVAKK--PTVAASSGGDGTIRIWNLQSRETRY--TIQDFTND-- 318
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTL-VTA 250
V V+ G+ L++ G D+ YD+ PV GH ++T + F + +T
Sbjct: 319 VYAVDMDSSGAKLISGGF-DRTFCLYDIESG-KPVFKKQGHLASITSVLFDPSGNMAITG 376
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
G D +K+W++ ++ V+R ++ + R + ++ + + ++D+R E
Sbjct: 377 GKDLAIKIWDIRNALVVRVLAPVLS--EVTSVHADRSFSYILGSTKNSTIRLWDMRMSEA 434
Query: 311 VWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
V + + + + FV + C+ G D+ T+++G DG ++VF
Sbjct: 435 VNLLRGH----SNTSKHFVRA-CF---GPDDRTVLSGSDDGKIYVF 472
>gi|307591651|ref|YP_003900450.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
gi|306986505|gb|ADN18384.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
Length = 1202
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 22/198 (11%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L SG DG++ + + H G+ +WS+D + +L ASGS D T+++W+ +
Sbjct: 643 LISGGLDGLLRVTSAQTGELLHTFSGHQGQ-IWSIDCALLQNLL-ASGSGDHTIRIWNLK 700
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLVFDG 231
K + ++ S S V ++F+ G+ LV+ G A+ K +DV+ +++D ++ G
Sbjct: 701 TK--KIIYILEDS---SEVWTIKFNYLGNLLVS-GSAEGKIKLWDVQTGELLDTLI---G 751
Query: 232 HRKTVTYIRFLDVD----TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
H V R +DV +++A +D LKLW++ ++I T++GH N V +
Sbjct: 752 HEDQV---RMVDVSRDGKQVISASSDRTLKLWDIEKKKLIHTFEGHNNQVWTVAFN--SD 806
Query: 288 GGLLGCGSETNQVFVYDV 305
G LL G ++ ++DV
Sbjct: 807 GNLLASGDVEGKIKLWDV 824
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 68/324 (20%), Positives = 135/324 (41%), Gaps = 50/324 (15%)
Query: 15 TNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKS- 73
+++R WD + + + N + + + F+ ++ A+G + KI+++++ S
Sbjct: 772 SSDRTLKLWDIEKKKLIHTFEGHN----NQVWTVAFNSDGNLLASGDVEGKIKLWDVNSK 827
Query: 74 --------------VLVDHPVVAVVDHSK---------VCDYYIC------TPAKLSSLK 104
++ HP + ++ S + + Y+ +P S
Sbjct: 828 KLQKTIQGHREQIHIVTFHPKLPILASSGFDSTFKFWGIPEAYLLKIWQGFSPTLFCS-S 886
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLG-ASGSD 163
W P V G G ++ +++E++ P + H G W S G AS S
Sbjct: 887 WHPQGHQIVAGGGTQ--IINRWNIEQERPFMSLEGHEG---WIFGISFNPDGKGFASAST 941
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++WD + GKC T+ + V+FHP ++A+G +D+ +++ +
Sbjct: 942 DSTIKVWD--TETGKCYKTLY--GHDNWTWTVDFHP-KKPILASGSSDRTIKLWNLTQG- 995
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
L GH V+ ++F D L +A D +KLWN + + + +GH N V
Sbjct: 996 KVQLTLKGHENAVSSVQFSPDGLFLASASFDRTIKLWNAQTGQQLNSLQGHDNWIYCVKF 1055
Query: 283 SVWRHGGLLGCGSETNQVFVYDVR 306
S R G +L ++ V+ ++
Sbjct: 1056 S--RDGQILASSDTDGKIIVWSLK 1077
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
+L SG D + ++L+ K I+ ++ VW++ ++ +L SGS +G +++WD
Sbjct: 684 LLASGSGDHTIRIWNLKTKKIIYILED--SSEVWTIKFNYLGNLL-VSGSAEGKIKLWDV 740
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
+ G+ + T+ V V+ G +++A +D+ +D+ K + F+GH
Sbjct: 741 QT--GELLDTL--IGHEDQVRMVDVSRDGKQVISAS-SDRTLKLWDIEKK-KLIHTFEGH 794
Query: 233 RKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
V + F D + L + +G +KLW+VN ++ +T +GH
Sbjct: 795 NNQVWTVAFNSDGNLLASGDVEGKIKLWDVNSKKLQKTIQGH 836
>gi|281410803|gb|ADA68814.1| HET-R [Podospora anserina]
Length = 504
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D V +D + + H G V+SV +S L ASG+ D T+++W
Sbjct: 59 GQRLASGAVDDTVKIWDPASGQCLQTLEGHNGS-VYSVAFSADGQRL-ASGAGDDTVKIW 116
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
DP G+C+ T++ R +V V F P G A+G D+ +D + +
Sbjct: 117 DPAS--GQCLQTLE--GHRGSVSSVAFSPDGQRF-ASGAGDRTIKIWDPASG-QCLQTLE 170
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
GHR +V+ + F D L + D +K+W+ + ++T +GH + + V S
Sbjct: 171 GHRGSVSSVAFSADGQRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSVAFS 224
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 114/272 (41%), Gaps = 36/272 (13%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P FA+G R IRI++ S + ++ + Y + A
Sbjct: 259 SVSSVAFSPDGQRFASGAGDRTIRIWDPAS----GQCLQTLEGHRGWVYSVAFSAD---- 310
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
G+ SG D V +D + + H G V SV +S L ASG+D
Sbjct: 311 -------GQRFASGAGDDTVKIWDPASGQCLQTLESHNGS-VSSVAFSPDGQRL-ASGAD 361
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++WDP G+C+ T++ + V V F G L A+G D D K+
Sbjct: 362 DDTVKIWDPAS--GQCLQTLE--GHKGLVYSVTFSADGQRL-ASGAGD------DTVKIW 410
Query: 224 DP-----VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
DP + +GHR +V + F D + D +K+W+ + ++T +GH +
Sbjct: 411 DPASGQCLQTLEGHRGSVHSVAFSPDGQRFASGAVDDTVKIWDPASGQCLQTLEGHNGSV 470
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ V S G L G+ V ++D G+
Sbjct: 471 SSVAFSA--DGQRLASGAVDCTVKIWDPASGQ 500
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 26/267 (9%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ + F P FA+G R I+I++ S + +SS+
Sbjct: 133 SVSSVAFSPDGQRFASGAGDRTIKIWDPAS-------------GQCLQTLEGHRGSVSSV 179
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ G+ L SG D V +D + + H G V SV +S D ASG
Sbjct: 180 AFS--ADGQRLASGAVDRTVKIWDPASGQCLQTLEGHTG-SVSSVAFSP-DGQRFASGVV 235
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T+++WDP G+C+ T++ R +V V F P G A+G D+ +D
Sbjct: 236 DDTVKIWDPAS--GQCLQTLE--GHRGSVSSVAFSPDGQRF-ASGAGDRTIRIWDPASG- 289
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ +GHR V + F D + D +K+W+ + ++T + H + + V
Sbjct: 290 QCLQTLEGHRGWVYSVAFSADGQRFASGAGDDTVKIWDPASGQCLQTLESHNGSVSSVAF 349
Query: 283 SVWRHGGLLGCGSETNQVFVYDVRWGE 309
S G L G++ + V ++D G+
Sbjct: 350 S--PDGQRLASGADDDTVKIWDPASGQ 374
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 28/201 (13%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V+SV +S L ASG+ D T+++WDP G+C T++ +V V F P G L
Sbjct: 8 VYSVAFSADGQRL-ASGAGDRTVKIWDPAS--GQCFQTLE--GHNGSVYSVAFSPDGQRL 62
Query: 205 VAAGCADKKAYAYDVRKMVDP-----VLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKL 258
A+G D D K+ DP + +GH +V + F D L + D +K+
Sbjct: 63 -ASGAVD------DTVKIWDPASGQCLQTLEGHNGSVYSVAFSADGQRLASGAGDDTVKI 115
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
W+ + ++T +GH + + V S G G+ + ++D G+ + +
Sbjct: 116 WDPASGQCLQTLEGHRGSVSSVAFS--PDGQRFASGAGDRTIKIWDPASGQCLQTLE--- 170
Query: 319 VTAAGSERGFVSSVCWRRVGE 339
RG VSSV + G+
Sbjct: 171 -----GHRGSVSSVAFSADGQ 186
>gi|323455289|gb|EGB11158.1| hypothetical protein AURANDRAFT_22631 [Aureococcus anophagefferens]
Length = 350
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 30/276 (10%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
++ F P+ A+GG R I ++ + + +Y + K + L
Sbjct: 62 AVYAFSFGPTGEFAASGGAERAIYLWEV--------------YGDCANYNVLRGHKNAVL 107
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ GR L S D V +D + HGG V +V ++ + L SG D
Sbjct: 108 ELSWLRDGRTLASASADESVALWDCHAGKRKKKYAGHGGV-VNAVRAARSEDTL-VSGGD 165
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
DG +WD R + V T+ + +AVC E +S V AG ++ +D+R M
Sbjct: 166 DGCCVLWDAR--ERRSVKTLAGDYAVTAVCFDE----DASRVFAGGLEESVKCWDLR-MD 218
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN-- 276
D V GH T+T + D L++ D L W+V + R++ T+ GH ++
Sbjct: 219 DVVYELRGHADTITGLSLSPDGTKLLSNAMDAKLHCWDVQPAAGEDRLLTTFVGHQHDFH 278
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
+N + S G + CGS V V+DV E ++
Sbjct: 279 KNLLRCSWSSDGEKVACGSSDQVVHVWDVATAEELY 314
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DV 244
+ +AV F P G A+G A++ Y ++V V GH+ V + +L D
Sbjct: 57 TGQEAAVYAFSFGPTGE-FAASGGAERAIYLWEVYGDCANYNVLRGHKNAVLELSWLRDG 115
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
TL +A D + LW+ + + + Y GH
Sbjct: 116 RTLASASADESVALWDCHAGKRKKKYAGH 144
>gi|195644660|gb|ACG41798.1| WD-repeat protein 57 [Zea mays]
Length = 335
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 29/269 (10%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
+I ++F+P+ +V A+G + I ++ + H + ++ + K + L
Sbjct: 47 AIYCMKFNPAGTVIASGSHDKDIFLWYV--------------HGECKNFMVLRGHKNAIL 92
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ T G + S D V +D+E + + EH V S ++ P L SGSD
Sbjct: 93 DLQWTTDGTQIISASPDKTVRVWDVETGKQVKKMAEHSSF-VNSCCPARKWPPLVVSGSD 151
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
DGT ++WD R G +Q + + V F + G D +D+RK
Sbjct: 152 DGTAKLWDLRQRGA-----IQTLPDKYQITAVSFSEAADKVFTGGL-DNDVKWWDLRKN- 204
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN-- 276
+ GH+ +T ++ D L+T D LK+W++ ++R I+T GH +N
Sbjct: 205 ETTEYLKGHQDMITGMQLSPDGSYLLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFE 264
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+N + S + GS V+++D
Sbjct: 265 KNLLKCSWSPDNRKVTAGSADRMVYIWDT 293
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDV 244
+ +SA+ C++F+P G +++A+G DK + + V +V GH+ + +++ D
Sbjct: 42 TGHQSAIYCMKFNPAG-TVIASGSHDKDIFLWYVHGECKNFMVLRGHKNAILDLQWTTDG 100
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+++A D +++W+V + ++ H
Sbjct: 101 TQIISASPDKTVRVWDVETGKQVKKMAEH 129
>gi|328872418|gb|EGG20785.1| WD-40 repeat-containing protein [Dictyostelium fasciculatum]
Length = 1237
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 126 YDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP 185
YD ++ ++ ++ R + S+ ++ D + AS S D +++WD R K ST+
Sbjct: 112 YDTNEEKYVYSFNKAHSRHISSLSWNMADSNILASASGDSFIKIWDLR--DQKNASTL-- 167
Query: 186 SASRSAVCCVEFHPFGSSLVAAG-CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF--L 242
++S++ +E++P S+++A+ C + K + D+RK P+ F H + I +
Sbjct: 168 INAQSSLNQIEWNPHSSTMIASSHCGEIKIW--DIRKFGSPLTSFTAHIGGIPSIEWHHK 225
Query: 243 DVDTLVTAGTDGCLKLWNVN-DSRVIRTYK 271
D T++T GTD +K+W+ + S+++R+YK
Sbjct: 226 DKSTILTCGTDRSIKIWDASPPSKLLRSYK 255
>gi|190896148|gb|ACE96587.1| U5 snRNP-specific protein-like factor [Populus tremula]
Length = 215
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + S D V +D++ I + EH V S S+ P L SGSDDGT ++W
Sbjct: 23 GSQIISASPDKTVRAWDVDTGKQIKKMAEHSSF-VNSCCPSRRGPPLVVSGSDDGTSKLW 81
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R G +Q + + V F S + G D +D+RK + + +
Sbjct: 82 DLRQKGA-----IQTFPDKYQITAVSFSD-ASDKIFTGGIDNDVKVWDIRKG-EVTMTLE 134
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVGLS 283
GH+ +T ++ D L+T G D L +W++ +R ++ ++GH +N +N + S
Sbjct: 135 GHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCS 194
Query: 284 VWRHGGLLGCGSETNQVFVYD 304
G + GS V+++D
Sbjct: 195 WSPDGSKVTAGSADRMVYIWD 215
>gi|456388414|gb|EMF53904.1| hypothetical protein SBD_5448 [Streptomyces bottropensis ATCC 25435]
Length = 1295
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 115/281 (40%), Gaps = 38/281 (13%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVD-HSKVCDYYICTPAKLSSLKWKPG 108
+ P + AT +R+++ ++ H +VA ++ H++ +P
Sbjct: 982 YSPDGKLLATADADHSVRLWDART----HTLVAALEGHTETVFSVAFSP----------- 1026
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
GR L S DG V +D+ + + HGG+ V+SV +S L ++GSD T++
Sbjct: 1027 -DGRTLASAGSDGTVRLWDVAGHKALKKLTGHGGQ-VFSVAFSPDGRTLASAGSDH-TVR 1083
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD G + ++ ++ V V F P G +L AG D +DV + +
Sbjct: 1084 LWD--VAGRRQLAVLR--GHEDFVNDVAFSPDGRTLAGAGD-DLTVRLWDVAGHRE-LAA 1137
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
GH V + F D TL ++G DG ++LW+V R GH V S
Sbjct: 1138 LTGHSGAVRGVAFSPDGRTLASSGNDGTVRLWDVRSRRFETALSGHSGAVRGVAFSP--D 1195
Query: 288 GGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
G L V ++D+ P VW DF P
Sbjct: 1196 GRTLASSGNDRTVRLWDIAGRRPWATLTGHTNAVWGVDFAP 1236
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A + DGT+Q+WD G + T + V + + P G L +AG D+ +D
Sbjct: 782 AVAAADGTVQLWD---TGPRPRLTAALPGHKGGVNALAYAPDGRMLASAGT-DRAVRLWD 837
Query: 219 V--RKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
++VD GH V + F D T+ +AG D ++LW+V D R+ T+ G +
Sbjct: 838 TGRARLVD---ALKGHADDVLGVAFSPDGRTVASAGVDRTVRLWDVGDGRLTDTFTGSSD 894
Query: 276 NRNFVGLS 283
+ N V +
Sbjct: 895 DINAVAFT 902
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKV----PIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ G +L + +D V+ +DL V P E VW YS D L A+ D
Sbjct: 945 SDGALLATAGFDQSVVLWDLNGAVLTSRPFTE--------VWQTAYSP-DGKLLATADAD 995
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
++++WD R V+ ++ V V F P G +L +AG +D +DV
Sbjct: 996 HSVRLWDARTH--TLVAALE--GHTETVFSVAFSPDGRTLASAG-SDGTVRLWDVAGH-K 1049
Query: 225 PVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ GH V + F D TL +AG+D ++LW+V R + +GH + N V S
Sbjct: 1050 ALKKLTGHGGQVFSVAFSPDGRTLASAGSDHTVRLWDVAGRRQLAVLRGHEDFVNDVAFS 1109
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 47/274 (17%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P A+ G+ R +R+++ V ++ D + + ++
Sbjct: 851 ADDVLGVAFSPDGRTVASAGVDRTVRLWD-------------VGDGRLTDTFTGSSDDIN 897
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSV----DYSKG---- 153
++ + P + V GD G +D+ GGR+ + DY G
Sbjct: 898 AVAFTPDGTTVVGAVGD--GTTRLWDV-----------RGGRQTLVLAGHTDYVLGVAVT 944
Query: 154 -DPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK 212
D L A+ D ++ +WD +G V T +P + V + P G L+A AD
Sbjct: 945 SDGALLATAGFDQSVVLWD--LNG--AVLTSRPF---TEVWQTAYSPDGK-LLATADADH 996
Query: 213 KAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYK 271
+D R V +GH +TV + F D TL +AG+DG ++LW+V + ++
Sbjct: 997 SVRLWDARTHT-LVAALEGHTETVFSVAFSPDGRTLASAGSDGTVRLWDVAGHKALKKLT 1055
Query: 272 GHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
GH V S G L + V ++DV
Sbjct: 1056 GHGGQVFSVAFSP--DGRTLASAGSDHTVRLWDV 1087
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 24/216 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+ G +R++++ + + H + +P
Sbjct: 1064 VAFSPDGRTLASAGSDHTVRLWDVAG---RRQLAVLRGHEDFVNDVAFSP---------- 1110
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR L D V +D+ + H G V V +S L +SG +DGT+
Sbjct: 1111 --DGRTLAGAGDDLTVRLWDVAGHRELAALTGHSGA-VRGVAFSPDGRTLASSG-NDGTV 1166
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD R + T S AV V F P G +L ++G D+ +D+ P
Sbjct: 1167 RLWDVRS---RRFETAL-SGHSGAVRGVAFSPDGRTLASSGN-DRTVRLWDIAGR-RPWA 1220
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
GH V + F D T+ ++ TDG ++LW+++
Sbjct: 1221 TLTGHTNAVWGVDFAPDGRTVASSSTDGTVRLWDLD 1256
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 13/150 (8%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS D +++WD + V ++ A V V F P G ++ +AG D+ +D
Sbjct: 825 ASAGTDRAVRLWD--TGRARLVDALKGHADD--VLGVAFSPDGRTVASAGV-DRTVRLWD 879
Query: 219 VR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
V ++ D F G + + F D T+V A DG +LW+V R GH +
Sbjct: 880 VGDGRLTD---TFTGSSDDINAVAFTPDGTTVVGAVGDGTTRLWDVRGGRQTLVLAGHTD 936
Query: 276 NRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+G++V G LL V ++D+
Sbjct: 937 --YVLGVAVTSDGALLATAGFDQSVVLWDL 964
>gi|440888133|gb|ELR44552.1| WD repeat-containing protein 17, partial [Bos grunniens mutus]
Length = 580
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 10/178 (5%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ SL W PG + G+ +G + +D++K I +EHG ++ + +S D A
Sbjct: 313 IYSLSWAPGDLNCIAGATSRNGAFI-WDIKKGKMIQRFNEHGKNGIFCIAWSHKDSKRIA 371
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+ S DG + R GK + + A AV ++ ++A GC DK Y V
Sbjct: 372 TCSGDGYCII---RTIDGKILHKYRHPA---AVFGCDWSQNNKDMIATGCEDKNVRVYYV 425
Query: 220 RKMVD-PVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
D P+ VF GH + V ++R+ L TL + DG +++W+ I GH
Sbjct: 426 ATSSDQPLKVFSGHTEKVFHVRWSPLREGTLCSGSDDGSVRIWDYTQDACINILSGHT 483
>gi|359464006|ref|ZP_09252569.1| WD-40 repeat-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 1703
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 22/197 (11%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVL 157
K++SL + P +G+ L SG D + +D P+ H G + SV P
Sbjct: 1484 GKINSLAFSP--NGKTLVSGSDDQTLRLWDATTGKPVKTIQAHDGP-ITSVSMG---PRY 1537
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
ASGSDD T+++W + DG V T+ + A+ V+F+ G+ L +A ++
Sbjct: 1538 LASGSDDETVKLW--QLDGTP-VKTL--TGHSLAISQVQFNSEGNLLASA------SWDN 1586
Query: 218 DVRKMVDPVLV--FDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYK--G 272
++ D LV GH+ VT + FL D LV+ G D +K+W V+ R+++T G
Sbjct: 1587 TIKLWRDGTLVQTLTGHQNGVTSLAFLPDQPILVSGGADQSVKVWQVDQGRLLKTLDGLG 1646
Query: 273 HVNNRNFVGLSVWRHGG 289
V N +G +W G
Sbjct: 1647 SVAQINLLGKQIWVSTG 1663
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 80/317 (25%), Positives = 121/317 (38%), Gaps = 29/317 (9%)
Query: 15 TNERARCEWDFNLRTTVSSSSSPN--AAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIK 72
T+ER R E T+VS SSS A+ SD V + + T I ++ +I
Sbjct: 1106 THERNRLEGHTQRVTSVSISSSGQWIASGSDDQTVRIWQANGQHLYTLNIGEQVN--DIA 1163
Query: 73 SVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP-GT------SGRVLGSGDYDGVVME 125
D + + V + T +LSS P GT G L + + V+
Sbjct: 1164 FSPDDQSIAVITTQGTVQRWSPKTEKQLSSFAASPQGTGLAFHPQGHQLATAGRESVIKI 1223
Query: 126 YDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP 185
+D + H G W VL S S+D T+++WD GK + T+
Sbjct: 1224 WDTRTSQLVKTLTGHQG---WVNAVEFAGNVL-VSASEDKTVRIWD--VAKGKTLRTLPK 1277
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDV 244
A+ AV + S +AA D + + + L D VT + F D
Sbjct: 1278 QAT--AVTDIAISS-DSQTLAASMEDGTIQLWSLSGQLLHTLETDN--VVVTSVAFGPDG 1332
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
+TLV+ D L+LW V +++ T KGH + + +G L S QV +
Sbjct: 1333 NTLVSTHADHSLRLWQVATGKLLSTLKGH--GAPTLDAAFHPNGNTLISASIDKQVRI-- 1388
Query: 305 VRWGEPVWVHDFEPVTA 321
W P D P+ A
Sbjct: 1389 --WATPSIPEDTSPILA 1403
Score = 38.1 bits (87), Expect = 6.8, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 234 KTVTY-IRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
+T TY +RF + +G D +++W++++ V RT GH N + S +G L
Sbjct: 1442 ETPTYALRFSADSQQLVSGHDPTIQVWDIHEGTVQRTLSGHTGKINSLAFS--PNGKTLV 1499
Query: 293 CGSETNQVFVYDVRWGEPV---WVHDFEPVTAAGSERGFVSS 331
GS+ + ++D G+PV HD P+T+ +++S
Sbjct: 1500 SGSDDQTLRLWDATTGKPVKTIQAHD-GPITSVSMGPRYLAS 1540
>gi|125556318|gb|EAZ01924.1| hypothetical protein OsI_23950 [Oryza sativa Indica Group]
gi|222636007|gb|EEE66139.1| hypothetical protein OsJ_22200 [Oryza sativa Japonica Group]
Length = 326
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 29/265 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F+P+ +V A+G + I ++ + H +Y + K + L +
Sbjct: 42 MKFNPAGTVIASGSHDKDIFLWYV--------------HGDCKNYMVLRGHKNAVLDLQW 87
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
T G + S D V +D+E + + EH V S ++ P L SGSDDGT
Sbjct: 88 TTDGTQIISASPDKTVRVWDVETGKQVKKMAEHSSF-VNSCCPARKWPPLVVSGSDDGTA 146
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD R G +Q + + V F + G D +D+RK +
Sbjct: 147 KLWDLRQRGA-----IQTLPDKYQITAVSFSEAADKVFTGGL-DNDVKWWDLRKN-EVTE 199
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFV 280
GH+ +T ++ D L+T D LK+W++ ++R I+T GH +N +N +
Sbjct: 200 YLKGHQDMITGMQLSPDGSYLLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLL 259
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV 305
S + GS V+++D
Sbjct: 260 KCSWSPDNRKVTAGSADRMVYIWDT 284
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDV 244
+ +SAV C++F+P G +++A+G DK + + V +V GH+ V +++ D
Sbjct: 33 TGHQSAVYCMKFNPAG-TVIASGSHDKDIFLWYVHGDCKNYMVLRGHKNAVLDLQWTTDG 91
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+++A D +++W+V + ++ H
Sbjct: 92 TQIISASPDKTVRVWDVETGKQVKKMAEH 120
>gi|393212862|gb|EJC98360.1| HET-R [Fomitiporia mediterranea MF3/22]
Length = 532
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 134/328 (40%), Gaps = 40/328 (12%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICT 96
P +D + + F P + F +G R IRI++I+S V + +
Sbjct: 48 PFEGHTDWVSSVAFSPEGTRFVSGSNDRTIRIWDIESGQV------------ISGPFKGH 95
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF--ERDEHGGRRVWSVDYSKGD 154
+ + S+ + P G + SG D VM +D E +P + H GR V SV S+ D
Sbjct: 96 ESCVLSVAFSP--DGMHVSSGSADMTVMVWDTEGGLPSLCGPFEGHAGRIV-SVSISR-D 151
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
+ ASGS D T+++WD + G+C+S + V V F P + LV +G D
Sbjct: 152 GLHIASGSADRTIRIWD--SENGQCISE-SFRGHTTKVNAVSFSPVSTRLV-SGSDDGTV 207
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYI----RFLDVDTLVTAGT-DGCLKLWNVNDSRVIRT 269
+D F G VT + RF + V +G+ D L++W+ R +
Sbjct: 208 RIWDAETEQVVSGPFKGQTGRVTSVAFSPRFSHILARVASGSRDNTLRIWHFATGRAVSV 267
Query: 270 -YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGF 328
+KGH V S G + GS + V+D GE V +G +G
Sbjct: 268 PFKGHRGAIRSVAFS--PDGRHVASGSSDRTIQVWDAANGEAV----------SGPFKGH 315
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+V D +++G D L ++
Sbjct: 316 EGAVLSISFSPDGARILSGSDDKTLRIW 343
>gi|330793361|ref|XP_003284753.1| hypothetical protein DICPUDRAFT_148551 [Dictyostelium purpureum]
gi|325085353|gb|EGC38762.1| hypothetical protein DICPUDRAFT_148551 [Dictyostelium purpureum]
Length = 744
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 21/248 (8%)
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCD 175
SGD G++ + F + H ++ + +S D L AS +DD +++WD
Sbjct: 177 SGDDGGIIKYWQASMNCVKFFK-AHDQSKIRGLSFSPTDLKL-ASCADDKIIKIWD---- 230
Query: 176 GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKT 235
+C Q V CV +HP SL+ +G D +D + + + GH+ T
Sbjct: 231 FARCTEENQLIGHGWDVKCVSWHP-QKSLIVSGGKDNNIKLWDAKSAKN-ITTLHGHKST 288
Query: 236 VTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCG 294
V+ + + + + +V+A +D LKL+++ R ++T+KGH + L + H L G
Sbjct: 289 VSKVEWNQNGNWIVSASSDQLLKLFDIRTMRELQTFKGHGKEVTALALHPF-HEDLFVSG 347
Query: 295 SETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLH 354
+ ++ + V +P + V S+ W +G ++A GS+ L
Sbjct: 348 DKDGKILYWIVGSPDPQ-------AEIHSAHEADVWSLSWHPIGH----ILASGSNDLTT 396
Query: 355 VFVGKKKP 362
F + +P
Sbjct: 397 KFWSRNRP 404
>gi|114588833|ref|XP_516691.2| PREDICTED: WD repeat-containing protein 5B [Pan troglodytes]
gi|410220838|gb|JAA07638.1| WD repeat domain 5B [Pan troglodytes]
gi|410265806|gb|JAA20869.1| WD repeat domain 5B [Pan troglodytes]
gi|410293352|gb|JAA25276.1| WD repeat domain 5B [Pan troglodytes]
gi|410335527|gb|JAA36710.1| WD repeat domain 5B [Pan troglodytes]
Length = 330
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKLWDVR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
>gi|392588872|gb|EIW78203.1| WD40 repeat-like protein, partial [Coniophora puteana RWD-64-598
SS2]
Length = 460
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 127/302 (42%), Gaps = 44/302 (14%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + TV P A + V+++ P ++ A+ G R +++
Sbjct: 74 WDTSTHQTVLG---PLMAHISGVDVVQYSPDGALVASAGFDRTFKLWRA----------- 119
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
H C I P ++S+ + P + + D DG+V YD+E+ + E H
Sbjct: 120 ---HVGDCIATIAHPRDVNSISFSPAGKHSIATACD-DGLVRIYDVEEHELVRELAGHRS 175
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP-----SASRSAVCCVEF 197
V V YS D L AS S+D T+++W+ ST P + AV V F
Sbjct: 176 L-VRCVQYSP-DGSLIASSSNDYTIRLWN--------ASTGDPVKGPLRGHKHAVLKVTF 225
Query: 198 HPFGSSLVAAGCADKKAYAYDVR--KMVDPVLV-FDGHRKTVTYIRFLDVDT-LVTAGTD 253
G L++ +D+ +D+ VD L GH V ++F DT LV+ G D
Sbjct: 226 ACNGQRLISCS-SDESIRVWDINLGHCVDLALAPLSGHDGIVWAVKFTPDDTRLVSGGKD 284
Query: 254 GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR----WGE 309
+++W+V + + H ++ + +S G + GSE V V+D+R GE
Sbjct: 285 RTIRIWDVRSGVSLCVIEAHSDSVRTLSISF--DGSQIASGSEDMTVRVWDLRTHETLGE 342
Query: 310 PV 311
P+
Sbjct: 343 PL 344
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 17/149 (11%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD NL V + +P + + ++F P D+ +GG R IRI++++S + + A
Sbjct: 244 WDINLGHCVDLALAPLSGHDGIVWAVKFTPDDTRLVSGGKDRTIRIWDVRSGVSLCVIEA 303
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
D + G + SG D V +DL + E EH
Sbjct: 304 HSDSVRTLSISF---------------DGSQIASGSEDMTVRVWDLRTHETLGEPLEHSS 348
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+ G +L SG DGT+++W+
Sbjct: 349 KISSVSFSPDGLKLL--SGCLDGTLRVWE 375
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGSDDGTMQ 168
G + +G +D + + + E E G R W ++ +S L SGS D T++
Sbjct: 16 GTRIATGSWDSTIRIWKASTGCQVGEPLE--GHRSWIRAIAFSPDGRRL-VSGSKDKTLR 72
Query: 169 MWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+WD + + P A S V V++ P G+ LVA+ D+ + R V +
Sbjct: 73 VWDTSTHQ----TVLGPLMAHISGVDVVQYSPDGA-LVASAGFDRTFKLW--RAHVGDCI 125
Query: 228 VFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
H + V I F ++ TA DG +++++V + ++R GH + V S
Sbjct: 126 ATIAHPRDVNSISFSPAGKHSIATACDDGLVRIYDVEEHELVRELAGHRSLVRCVQYS-- 183
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPV 311
G L+ S + +++ G+PV
Sbjct: 184 PDGSLIASSSNDYTIRLWNASTGDPV 209
>gi|449435516|ref|XP_004135541.1| PREDICTED: transducin beta-like protein 3-like [Cucumis sativus]
gi|449488540|ref|XP_004158077.1| PREDICTED: transducin beta-like protein 3-like [Cucumis sativus]
Length = 871
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 141/312 (45%), Gaps = 39/312 (12%)
Query: 54 DSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRV 113
+ A IR+Y+I S+ + + H+++ +C + +SS G + V
Sbjct: 363 EQFLAVATNVEHIRVYDIASMSCSYILAG---HTEIV---LCLDSCVSS----SGCTLIV 412
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW--- 170
GS D + V +D+E K I H G V +V +SK SGS D T+++W
Sbjct: 413 TGSKDNN--VRLWDVESKTCIGVGVGHMGA-VGAVAFSKKRRDFFVSGSSDRTLKVWSFD 469
Query: 171 -----DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
+ R K + V +A + + P SLV +G D+ A + + +V
Sbjct: 470 GLAEDESRPVNLKAKAIV--AAHDKDINSIAVAP-NDSLVCSGSQDRTACVWRLPDLV-S 525
Query: 226 VLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
V+V GH++ + + F VD +VTA D +K+W ++D ++T++GH+++ +
Sbjct: 526 VVVLRGHKRGIWSVEFSPVDQCVVTASGDKTIKIWAISDGSCLKTFEGHMSSVLRASF-L 584
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTL 344
R L+ CG++ V ++ V+ E + V+D V VG+ L
Sbjct: 585 TRGTQLVSCGAD-GSVMLFTVKTEERIAVYDQHE-----------DKVWALAVGKKTEML 632
Query: 345 VAGGSDGLLHVF 356
GGSDG ++++
Sbjct: 633 ATGGSDGAVNLW 644
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF-GSSLVAAGCADKKA 214
+L +G+D + +WD DGG C T + + V + FHP L+ +G D
Sbjct: 116 LLATAGADRKVL-VWD--VDGGFC--THYFTGHKGVVSSILFHPDPNKQLLFSGSEDGNV 170
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND---SRVIRTY 270
A+D+ M + GH TVT I D TL+TAG D + +WN+++ + + TY
Sbjct: 171 RAWDL--MSKKCVATLGHESTVTSIDISEDGWTLLTAGRDKVVHVWNLHNYTCKKTVLTY 228
Query: 271 K 271
+
Sbjct: 229 E 229
>gi|427719259|ref|YP_007067253.1| WD-40 repeat-containing protein [Calothrix sp. PCC 7507]
gi|427351695|gb|AFY34419.1| WD-40 repeat-containing protein [Calothrix sp. PCC 7507]
Length = 1211
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 48/296 (16%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ + P + A+G R IR++N H+ C++ L + W
Sbjct: 721 VAYSPDGQILASGSDDRTIRLWN---------------HNTECNHIF--QGHLERV-WSV 762
Query: 108 GTS--GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
S G L SG D + +++ + EH R V ++ +S L S SDD
Sbjct: 763 AFSADGNTLASGSADHTIRLWEVNTGQCLNILPEHSDR-VRAIAFSPDAKTL-VSASDDQ 820
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
T+++W+ G+C++ +Q A+ +V V F+ G + +A+G D+ +DV
Sbjct: 821 TVRVWE--ISTGQCLNVLQGHAN--SVFSVAFNADGRT-IASGSIDQTVRLWDVTTG-RC 874
Query: 226 VLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
F G+R +V + F D T+ + TD ++LW+VN ++T GH R +V SV
Sbjct: 875 FKTFKGYRSSVFSVAFNADGQTIASGSTDQTVRLWDVNTGTCLKTLTGH---RGWV-TSV 930
Query: 285 WRH--GGLLGCGSETNQVFVYDVRWGEPV--------WVH--DFEP---VTAAGSE 325
H G LL S V ++ G+ + WV F P V A+GS+
Sbjct: 931 AFHPDGKLLASSSVDRTVRIWSTHTGKCLQTLPGHGNWVQSVSFSPDGKVLASGSD 986
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 11/178 (6%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++S+ + P G++L S D V + + HG V SV +S VL A
Sbjct: 927 VTSVAFHP--DGKLLASSSVDRTVRIWSTHTGKCLQTLPGHGNW-VQSVSFSPDGKVL-A 982
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD T+++W + G+C+ + S S + CV F P G ++A+ D + V
Sbjct: 983 SGSDDQTIRLWS--VNTGECLQIL--SGHASWIWCVRFSPDGQ-ILASSSEDHTIRLWSV 1037
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+ + + GH V I F D L +A D ++LW++N + + GH NN
Sbjct: 1038 NTG-ECLQILAGHNSRVQAIAFSPDGQILASASEDETVRLWSMNTGECLNIFAGHSNN 1094
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 23/241 (9%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG + V +D+ H GR + SV YS +L ASGSDD T+++W
Sbjct: 685 GQTLASGGDEPTVRLWDIHTGECQKILSGHTGR-ILSVAYSPDGQIL-ASGSDDRTIRLW 742
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ + C Q R V V F G++L A+G AD ++V + +
Sbjct: 743 NHNTE---CNHIFQGHLER--VWSVAFSADGNTL-ASGSADHTIRLWEVNTG-QCLNILP 795
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
H V I F D TLV+A D +++W ++ + + +GH N+ V + G
Sbjct: 796 EHSDRVRAIAFSPDAKTLVSASDDQTVRVWEISTGQCLNVLQGHANSVFSVAFNA--DGR 853
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
+ GS V ++DV G + +G+ SSV D T+ +G +
Sbjct: 854 TIASGSIDQTVRLWDVTTGR-----------CFKTFKGYRSSVFSVAFNADGQTIASGST 902
Query: 350 D 350
D
Sbjct: 903 D 903
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L +GD +G + + + + H G VW V +S GD AS S D T+++W
Sbjct: 601 GKLLATGDAEGGLRLWQVATGQLLLNFKGHLGW-VWLVTFS-GDGQTLASCSSDKTIRLW 658
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+C + + RS++ + F G +L A+G + +D+ + +
Sbjct: 659 D--VSTGECKKIL--TGHRSSIWAIAFSADGQTL-ASGGDEPTVRLWDIHTG-ECQKILS 712
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH + + + D L + D ++LWN N + ++GH+ V S G
Sbjct: 713 GHTGRILSVAYSPDGQILASGSDDRTIRLWNHN-TECNHIFQGHLERVWSVAFSA--DGN 769
Query: 290 LLGCGSETNQVFVYDVRWGE 309
L GS + + +++V G+
Sbjct: 770 TLASGSADHTIRLWEVNTGQ 789
>gi|197098102|ref|NP_001127213.1| WD repeat-containing protein 5B [Pongo abelii]
gi|75070930|sp|Q5RE95.1|WDR5B_PONAB RecName: Full=WD repeat-containing protein 5B
gi|55726281|emb|CAH89912.1| hypothetical protein [Pongo abelii]
Length = 330
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKLWDMR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
>gi|170085015|ref|XP_001873731.1| coatomer protein [Laccaria bicolor S238N-H82]
gi|164651283|gb|EDR15523.1| coatomer protein [Laccaria bicolor S238N-H82]
Length = 846
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 99/241 (41%), Gaps = 24/241 (9%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + ++F P++ G + IYN H AVV +V + + ++
Sbjct: 13 SDRVKGVDFHPTEPWLLAGLYNGTVNIYN-------HETGAVVKTFEVAEVPVRCAKFIA 65
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
W V GS D+ V Y+ +KV FE R + + VL +G
Sbjct: 66 RKNW------FVAGSDDFQLRVFNYNTHEKVAAFEAHPDYIRCL--TVHPTASIVL--TG 115
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD +++ WD G K + + + + F+P ++ + C D+ + +
Sbjct: 116 SDDMSIKAWDWE-KGWKNIQIYE--GHTHYIMNLAFNPKDANTFVSACLDRTVKMWSITS 172
Query: 222 MVDPVLVFDGHRKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
P + H K V Y+ F D LVT G D +K+W+ ++T +GH NN +
Sbjct: 173 ST-PNFTMEAHDKGVNYVDFYPGADKPYLVTTGDDKTVKVWDYLSKSCVQTMEGHTNNVS 231
Query: 279 F 279
F
Sbjct: 232 F 232
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 27/178 (15%)
Query: 114 LGSGDYDGVVMEYDLEKK--VPIFERDE-------HGGRRVWSVDYSKGDPVLGASGSDD 164
L +G Y+G V Y+ E V FE E R+ W V +GSDD
Sbjct: 28 LLAGLYNGTVNIYNHETGAVVKTFEVAEVPVRCAKFIARKNWFV-----------AGSDD 76
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++++ P R C+ HP +S+V G D A+D K
Sbjct: 77 FQLRVFNYNTHEKVAAFEAHPDYIR----CLTVHP-TASIVLTGSDDMSIKAWDWEKGWK 131
Query: 225 PVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ +++GH + + F D +T V+A D +K+W++ S T + H N+V
Sbjct: 132 NIQIYEGHTHYIMNLAFNPKDANTFVSACLDRTVKMWSITSSTPNFTMEAHDKGVNYV 189
>gi|392869159|gb|EAS27643.2| WD repeat protein [Coccidioides immitis RS]
Length = 515
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P +S R + +G D +D + PI H V +V +S D +L A+GS D T
Sbjct: 155 PASSSR-MATGSGDSTARIWDCDTGTPIHTLKGHSSW-VLAVSWSPNDKIL-ATGSMDNT 211
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF-----GSSLVAAGCADKKAYAYDV-R 220
+++WDP+ G+ + ++ + + + P+ G +A+ D +DV
Sbjct: 212 VRLWDPKT--GQALGAPLKGHTK-WIMSLAWEPYHLQDPGRPRLASASKDSTVRIWDVVS 268
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
K ++ VL GH+ +V+ +R+ + + T+ D +K+WN D +I+T H + N +
Sbjct: 269 KRIENVLT--GHKGSVSCVRWGGMARIYTSSHDKTIKIWNPKDGSLIQTLSSHTHRVNHL 326
Query: 281 GLSV 284
LS
Sbjct: 327 ALST 330
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+ + D + +D P+ GH+K V ++ F D + +A D +KLWN D
Sbjct: 374 LVSASDDFTMFLWDPASSNKPISRMLGHQKEVNHVTFSPDGAYIASASFDNHVKLWNARD 433
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ + + +GHV S LL S+ + V+DVR G+
Sbjct: 434 GKFMSSLRGHVGAVYQCCFSA--DSRLLVSSSKDTTLKVWDVRTGK 477
>gi|195114434|ref|XP_002001772.1| GI17028 [Drosophila mojavensis]
gi|193912347|gb|EDW11214.1| GI17028 [Drosophila mojavensis]
Length = 347
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 183 VQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL 242
+Q + EFHP G L+++G D++ Y + V + ++ GH V F
Sbjct: 49 MQLEGHEGEIFTTEFHPEGEMLLSSGF-DRQLYIWQVYGDCENIMAMSGHSGAVMEAHFT 107
Query: 243 -DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGC-GSETNQV 300
D + T TD L +W++ + +R KGH N N V S R G L C GS+ +
Sbjct: 108 PDGSHIFTCSTDKTLAIWDIVTGQRVRRLKGHTNFVNSVQGS--RRGQQLLCSGSDDRTI 165
Query: 301 FVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
++D R +PV V + P V++VC+ G+ +++GG D L ++ +K
Sbjct: 166 RIWDARKKQPVHVLE-SPYQ--------VTAVCF---GDTSEQVISGGIDNELKIWDIRK 213
Query: 361 K 361
+
Sbjct: 214 Q 214
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 20/171 (11%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFG--S 202
V SV S+ L SGSDD T+++WD R + V ++ +AVC FG S
Sbjct: 143 VNSVQGSRRGQQLLCSGSDDRTIRIWDAR--KKQPVHVLESPYQVTAVC------FGDTS 194
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
V +G D + +D+RK + GH T+T + + D ++T D L++W+V
Sbjct: 195 EQVISGGIDNELKIWDIRKQ-QVLHHLRGHTDTITAVALSPEGDFVLTNAMDNTLRVWDV 253
Query: 262 N----DSRVIRTYKGHVNN--RNFVGLSVWRHGG-LLGCGSETNQVFVYDV 305
R ++ ++GH +N +N + + W GG + GS V+V+DV
Sbjct: 254 RAYAPGERCVKVFQGHQHNFEKNLLRCA-WAPGGDKISAGSADRHVYVWDV 303
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+ +WD G+ V ++ + V V+ G L+ +G D+ +D RK
Sbjct: 117 STDKTLAIWD--IVTGQRVRRLK--GHTNFVNSVQGSRRGQQLLCSGSDDRTIRIWDARK 172
Query: 222 MVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
PV V + + VT + F D + +++ G D LK+W++ +V+ +GH + V
Sbjct: 173 K-QPVHVLESPYQ-VTAVCFGDTSEQVISGGIDNELKIWDIRKQQVLHHLRGHTDTITAV 230
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEP 310
LS G + + N + V+DVR P
Sbjct: 231 ALSP--EGDFVLTNAMDNTLRVWDVRAYAP 258
>gi|426341826|ref|XP_004036224.1| PREDICTED: WD repeat-containing protein 5B [Gorilla gorilla
gorilla]
Length = 330
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKLWDVR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAY---AYDVRKMVDPVLVFDGHRKTVTYIRFL-DV 244
R AV V+F P G L A+ AD+ AYD + + L GH ++ + + D
Sbjct: 41 REAVSSVKFSPNGEWL-ASSSADRLIIIWGAYDGK--YEKTLY--GHNLEISDVAWSSDS 95
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
LV+A D LKLW+V + ++T KGH N
Sbjct: 96 SRLVSASDDKTLKLWDVRSGKCLKTLKGHSN 126
>gi|374987952|ref|YP_004963447.1| putative WD-40 repeat protein [Streptomyces bingchenggensis BCW-1]
gi|297158604|gb|ADI08316.1| putative WD-40 repeat protein [Streptomyces bingchenggensis BCW-1]
Length = 1189
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 120/297 (40%), Gaps = 45/297 (15%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIK------------------SVLVDHPVVAV 83
+D + I F P ATGG+ R +R++++ S+ D +A
Sbjct: 823 TDYVLSIAFSPDGRALATGGLDRTVRLWDLARGQTRLTFGGHTDGVWAASLSPDGRTLAT 882
Query: 84 VDH---SKVCDYYICT---------PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
D +++ D P + S+ + P GR L G DG V +DL
Sbjct: 883 TDRGGPARLWDTRTGESRTVPVSGDPGEAESVAFAP--DGRTLAIGTSDGRVQFHDLRSG 940
Query: 132 VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT-MQMWDPRCDGGKCVSTVQPSASRS 190
I +H V + +S D L A GSD+ +Q+WD G+ +T+ +ASR
Sbjct: 941 EIIERYADHIRHNVDVLAFSP-DGRLLAVGSDEAEDVQVWD--TASGRVRTTL--AASRL 995
Query: 191 AVCCVEFHPFGSSLVAAG--CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
V + F P +L +G AD+ +D+++ P + D R D TL
Sbjct: 996 GVNALAFSPDSRTLAISGIRTADR-VQLWDLKRG-RPRITLDTSRTGAVAF-SPDGRTLA 1052
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
T G+DG +LWN D GH++ V S G L GS V V+DV
Sbjct: 1053 TGGSDGTARLWNTADGGRRAALTGHIDAATSVAFSP--DGRSLAVGSYEGGVRVWDV 1107
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 104/266 (39%), Gaps = 38/266 (14%)
Query: 25 FNLRTTVSSSSSPNAAVS-----------DSIGVIEFDPSDSVFATGGIARKIRIYNIKS 73
+ R+T S++S AA + D + + F P ATGG +R++
Sbjct: 542 YRTRSTKESTNSLYAAAALPLRKRLSGHADVVRSVAFSPDGRTLATGGADGAVRLWE--- 598
Query: 74 VLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVP 133
A S+ ++ +L + P GR L +G DG V ++ P
Sbjct: 599 --------ATTGESRST--LTRRAGQVDALAFSP--DGRTLATGGADGRVRLWEAATGEP 646
Query: 134 IFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
H GR V ++ + L + S D T+++WD G+ +T+ A +
Sbjct: 647 RDTLAGHTGR-VEALAFGPDGRTLASGSSFDDTVRLWD--VSAGRPRTTLTGEAGN--IR 701
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRF-LDVDTLVTA 250
+ F P G +L A G +D +D + D GH + V + F D TL T+
Sbjct: 702 SLAFSPDGRTL-AGGSSDGPVRLWDAATGRTRD---TLTGHTRVVGLVAFSADGRTLATS 757
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVNN 276
DG +LW+V RT+ H
Sbjct: 758 SYDGTARLWDVAKGTTRRTFGDHTGR 783
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 123/331 (37%), Gaps = 37/331 (11%)
Query: 30 TVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKV 89
T S S + + + F P ATGG ++R++ + P + H+
Sbjct: 600 TTGESRSTLTRRAGQVDALAFSPDGRTLATGGADGRVRLWEAAT---GEPRDTLAGHT-- 654
Query: 90 CDYYICTPAKLSSLKWKPGTSGRVLGSGD-YDGVVMEYDLEKKVPIFERDEHGGRRVWSV 148
++ +L + P GR L SG +D V +D+ P G + S+
Sbjct: 655 --------GRVEALAFGP--DGRTLASGSSFDDTVRLWDVSAGRPRTTLTGEAGN-IRSL 703
Query: 149 DYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG 208
+S L A GS DG +++WD G+ T+ + V V F G +L A
Sbjct: 704 AFSPDGRTL-AGGSSDGPVRLWDAAT--GRTRDTL--TGHTRVVGLVAFSADGRTL-ATS 757
Query: 209 CADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIR 268
D A +DV K D + D TL T+ ++LW+ + RV
Sbjct: 758 SYDGTARLWDVAKGTTRRTFGDHTGRVWAGALSPDGRTLATSDGRQTVRLWDTSTGRVRT 817
Query: 269 TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEP----------VWVHDFEP 318
T GH + + S G L G V ++D+ G+ VW P
Sbjct: 818 TLTGHTDYVLSIAFSP--DGRALATGGLDRTVRLWDLARGQTRLTFGGHTDGVWAASLSP 875
Query: 319 --VTAAGSERGFVSSVCWRRVGEDECTLVAG 347
T A ++RG + + R GE V+G
Sbjct: 876 DGRTLATTDRGGPARLWDTRTGESRTVPVSG 906
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 75/202 (37%), Gaps = 16/202 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD---YSKGDPVLGASGSDDGTM 167
GR L +G DG V ++ E RR VD +S L A+G DG +
Sbjct: 582 GRTLATGGADGAVRLWE----ATTGESRSTLTRRAGQVDALAFSPDGRTL-ATGGADGRV 636
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++W+ G+ T+ R V + F P G +L + D +DV P
Sbjct: 637 RLWEAAT--GEPRDTLAGHTGR--VEALAFGPDGRTLASGSSFDDTVRLWDV-SAGRPRT 691
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
G + + F D TL +DG ++LW+ R T GH V S
Sbjct: 692 TLTGEAGNIRSLAFSPDGRTLAGGSSDGPVRLWDAATGRTRDTLTGHTRVVGLVAFSA-- 749
Query: 287 HGGLLGCGSETNQVFVYDVRWG 308
G L S ++DV G
Sbjct: 750 DGRTLATSSYDGTARLWDVAKG 771
>gi|378731465|gb|EHY57924.1| Ca2+/calmodulin-dependent protein kinase [Exophiala dermatitidis
NIH/UT8656]
Length = 563
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 137/337 (40%), Gaps = 36/337 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
I I+F P ++ AT I IY++ + D P K+ A ++++
Sbjct: 185 ITSIKFSPDMTLLATASADNTINIYSVPADPKPDTPF-------KLLRTLRAHLAGVNAI 237
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYD-LEKKVPIFERDEHGGRR-VWSVDYSKGDPVLGASG 161
W P L S D ++ + L PI G V+S+ +S +L SG
Sbjct: 238 AWSPVGPPYTLASASDDKSILLWSPLSSDFPISPSPLIGHHNYVYSLAFSPKGNML-VSG 296
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D + +WD R G+ + ++ A V V+F G+ +V + D +D
Sbjct: 297 SYDEAVFLWDVRP--GRVMRSL--PAHSDPVSGVDFLRDGT-MVCSCAGDGLIRIWDSSS 351
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ D R+ VT +RF + A T D ++LW ++ ++TY+GHVN +
Sbjct: 352 GQCLKTLVDEARRPVTGVRFTPNGKYILAWTLDNSIRLWRYSEGTCVKTYQGHVNQEYSL 411
Query: 281 GLSVWRH-----------GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFV 329
G +V + L GSE V V+D+ + +W R V
Sbjct: 412 GGTVGSYYSSECQGSGTMEAFLASGSEDGDVLVWDISSKDVLW--------RGKGHRDVV 463
Query: 330 SSVCWRRVGEDECTLVAGGSDGLLHVFVGKKKPLSAQ 366
SV + R + LV+GG D L V++ + +P Q
Sbjct: 464 LSVDFGRTKAGKGLLVSGGKDRDLRVWILEGEPKPDQ 500
>gi|425773003|gb|EKV11380.1| U5 snRNP complex subunit, putative [Penicillium digitatum Pd1]
gi|425778841|gb|EKV16946.1| U5 snRNP complex subunit, putative [Penicillium digitatum PHI26]
Length = 416
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 33/280 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + + FDP+ A+G + R I ++N + + +Y T + +
Sbjct: 123 SGEVFAVRFDPTAQHIASGSMDRSILLWNT--------------YGQCENYGQLTGHRGA 168
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWS-VDYSKGDPVLGAS 160
L + R L S D + +D+E + R G + + +D SK L S
Sbjct: 169 VLDLQWSRDSRALFSASADMTLGSWDVETGERV--RRHVGHEEIINCLDISKRGQELLVS 226
Query: 161 GSDDGTMQMWDPRC-DGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
GSDDG++ +WDPR D + T P + V G+ + + G D +A+D+
Sbjct: 227 GSDDGSIGIWDPRQKDALDYLQTELP------ITAVALSEAGNEIYSGGI-DNTIHAWDI 279
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHV 274
RK V GH T+T ++ D TL++ D ++ W++ +R ++TY G
Sbjct: 280 RKKA-IVYSMAGHTDTITSLQISPDSQTLLSNSHDSTVRTWDIRPFAPTNRQVKTYDGAP 338
Query: 275 --NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
+N + S G + GS V V++ + G+ ++
Sbjct: 339 VGLEKNLIRASWDLKGEKIAAGSGDRSVVVWEAKTGKLLY 378
>gi|353243252|emb|CCA74815.1| related to WD40-repeat protein (notchless protein) [Piriformospora
indica DSM 11827]
Length = 847
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 32/279 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P A+G + IR+++ + P + HSK + +P
Sbjct: 133 VTTVSFSPGGLQIASGSQDKTIRLWDADTGQPLGP--PLQGHSKGVNTIAFSP------- 183
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
G + SG +D + +D++ + E V+S+ +S D ASGS D
Sbjct: 184 -----DGTKIASGSFDATIRLWDVDSGQTLGVPLEGHQGPVYSISFSP-DGSQIASGSWD 237
Query: 165 GTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD--VRK 221
GT++ WD D G+ + +P +VC + F P GS ++ +G D K +D R+
Sbjct: 238 GTIRQWD--VDNGQPLG--EPLEGHEDSVCAIAFSPDGSQII-SGSLDCKIRLWDTGTRQ 292
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
++ L +GH +V + D +V+ D ++LW+ + + I +GH + V
Sbjct: 293 LLGEPL--EGHEDSVDAVTLSPDGSRIVSGSADSTVRLWDAENGQPIGELQGHEGEVHTV 350
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV----RWGEPVWVHD 315
S G + GSE + ++DV + G P+ H+
Sbjct: 351 AFS--PDGSYIVSGSEDKTIRLWDVISGQQLGNPLHGHE 387
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 142/341 (41%), Gaps = 51/341 (14%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLV--------DHPVVAVVDHSKVCDYYIC 95
S+ + F P + +G RK+R+++ K+ +H V V S C
Sbjct: 389 SVQAVVFSPDGTRIVSGSWDRKVRLWDAKTGKPLGEPLRGHEHDVYGVALSSDGSRIASC 448
Query: 96 TPAKLSSLKWKPGTSGRVLGS--GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSV--DYS 151
+ S+++ +G+ LGS + G V D + F DE R+W V
Sbjct: 449 --SSDSTIRIWDIRTGQSLGSPFQGHQGPVYAVDFLQTGLDFSADET--VRLWDVFTGQP 504
Query: 152 KGDPVLG-----------------ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCC 194
G+P+ G ASGS+DGT+ +W+ + + + VC
Sbjct: 505 HGEPLQGHESFVYTVAFSPDGSRIASGSEDGTICLWEANA---RRLLREPLRGHQGWVCT 561
Query: 195 VEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDG 254
V F P GS +A+G D + ++V F GH +VT + + + + + G
Sbjct: 562 VAFSPDGSQ-IASGSTDNTVWIWNVETGQPLGTPFRGHNHSVTAVAWSPDGLQIASSSSG 620
Query: 255 -CLKLWNVNDSRVIRT-YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
++LW+V +++R +GH + N V S G + GS + + ++D+ G+ +
Sbjct: 621 DTIRLWDVTSGQLLREPLRGHGHFVNTVAFS--PDGFRIASGSSDHTIRLWDIETGQTL- 677
Query: 313 VHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLL 353
EP+ G V SV + + D +++G SDG +
Sbjct: 678 ---GEPLRG---HTGPVRSVIFTK---DGSKIISGSSDGTI 709
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 26/278 (9%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICT 96
P S + I F P + A+G IR++++ S V + H
Sbjct: 168 PLQGHSKGVNTIAFSPDGTKIASGSFDATIRLWDVDSGQTLG--VPLEGHQ--------- 216
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK-GDP 155
+ S+ + P G + SG +DG + ++D++ P+ E E V ++ +S G
Sbjct: 217 -GPVYSISFSP--DGSQIASGSWDGTIRQWDVDNGQPLGEPLEGHEDSVCAIAFSPDGSQ 273
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
++ SGS D +++WD G + + +V V P GS +V +G AD
Sbjct: 274 II--SGSLDCKIRLWD---TGTRQLLGEPLEGHEDSVDAVTLSPDGSRIV-SGSADSTVR 327
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV-NDSRVIRTYKGH 273
+D P+ GH V + F D +V+ D ++LW+V + ++ GH
Sbjct: 328 LWDAENG-QPIGELQGHEGEVHTVAFSPDGSYIVSGSEDKTIRLWDVISGQQLGNPLHGH 386
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+ V S G + GS +V ++D + G+P+
Sbjct: 387 EGSVQAVVFS--PDGTRIVSGSWDRKVRLWDAKTGKPL 422
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 24/240 (10%)
Query: 37 PNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVDHSKVCDYYIC 95
P DS+ I F P S +G + KIR+++ + L+ P+ H D
Sbjct: 254 PLEGHEDSVCAIAFSPDGSQIISGSLDCKIRLWDTGTRQLLGEPLEG---HEDSVDAVTL 310
Query: 96 TPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP 155
+P G + SG D V +D E PI E H G V +V +S D
Sbjct: 311 SP------------DGSRIVSGSADSTVRLWDAENGQPIGELQGHEG-EVHTVAFSP-DG 356
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
SGS+D T+++WD G + + + +V V F P G+ +V +G D+K
Sbjct: 357 SYIVSGSEDKTIRLWD-VISGQQLGNPLH--GHEGSVQAVVFSPDGTRIV-SGSWDRKVR 412
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRT-YKGH 273
+D + GH V + D + + +D +++W++ + + + ++GH
Sbjct: 413 LWDAKTGKPLGEPLRGHEHDVYGVALSSDGSRIASCSSDSTIRIWDIRTGQSLGSPFQGH 472
>gi|119490041|ref|ZP_01622665.1| WD-repeat protein [Lyngbya sp. PCC 8106]
gi|119454193|gb|EAW35345.1| WD-repeat protein [Lyngbya sp. PCC 8106]
Length = 1224
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 26/263 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F D + ATG + +++++I + + + H ++ +P
Sbjct: 861 VAFSQDDQILATGSQEQMVQLWDIAT---GQRLRTLRGHKHQVWSFVLSP---------- 907
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L +G D V +D+ I H VWSV +S +L ASGS D T+
Sbjct: 908 --DGKTLATGSDDHRVRLWDIHAGRCIKRFSGHSDW-VWSVCFSPNGRML-ASGSYDSTV 963
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD D G+ + T+ + R + V F G L+A+ D+ +DV+ + +
Sbjct: 964 KLWD--TDTGEALKTLHGHSDR--IETVVFSGDGK-LLASASDDQTVRVWDVQTG-ECLH 1017
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH + V + F D L + D LKLW++ + ++T +GH + + S
Sbjct: 1018 TLTGHSRWVGVVAFSPDGQILASGSHDHSLKLWDIQTGKCLQTLEGHFQRIDLLAFS--P 1075
Query: 287 HGGLLGCGSETNQVFVYDVRWGE 309
G L GS V V+DV G+
Sbjct: 1076 DGQSLASGSHDCTVKVWDVCTGK 1098
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 79/335 (23%), Positives = 137/335 (40%), Gaps = 58/335 (17%)
Query: 3 NFHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGI 62
NF Q A +++R WD N + + + I F P +S+ A+
Sbjct: 668 NFSSDGQMLASGSDDRTVRVWDVNSGGCLQVLTGHREGIRTVI----FSPDNSIVASSSD 723
Query: 63 ARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKW-----KPGTSGRVLGSG 117
+ +R+++I++ C + T S+ W K GT L +G
Sbjct: 724 DQTVRLWSIQT--------------GEC---LRTFTGNSTWNWTVAFIKEGTENSQLKNG 766
Query: 118 DYDGVVM---EYDLEKKVPI-------------------FERDEHGGRRVWSVDYSKGDP 155
+ + + E+DL K I F+ E VW+V +S+ D
Sbjct: 767 NCQNLTLVNSEFDLSKISWIASSCDENTVRLWDIESGQCFQSLEGHLDSVWAVAFSR-DG 825
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
L AS SDD T+++W + G C+ T++ S VC V F ++A G ++
Sbjct: 826 QLLASSSDDQTVKVWQTKT--GSCLKTLK--GFESQVCSVAFSQ-DDQILATGSQEQMVQ 880
Query: 216 AYDVRKMVDPVLVFDGHRKTV-TYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D+ + GH+ V +++ D TL T D ++LW+++ R I+ + GH
Sbjct: 881 LWDI-ATGQRLRTLRGHKHQVWSFVLSPDGKTLATGSDDHRVRLWDIHAGRCIKRFSGHS 939
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ V S +G +L GS + V ++D GE
Sbjct: 940 DWVWSVCFS--PNGRMLASGSYDSTVKLWDTDTGE 972
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 114 LGSGDYDGVVMEYDLEK--KVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
L +GD DG ++ ++ E+ K+ +F+ G V S+ +S ++ ASGSDD T+++W
Sbjct: 592 LATGDADGKILLWNSEQGQKLLVFQGKTKG---VKSIVFSPEGNLI-ASGSDDQTVRIW- 646
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
+ G+C+ + S + + CV F G ++A+G D+ +DV + V G
Sbjct: 647 -KVSTGECLD--RWSGHQETIKCVNFSSDGQ-MLASGSDDRTVRVWDVNSG-GCLQVLTG 701
Query: 232 HRKTVTYIRFLDVDTLVTAGTDG-CLKLWNVNDSRVIRTYKGH 273
HR+ + + F +++V + +D ++LW++ +RT+ G+
Sbjct: 702 HREGIRTVIFSPDNSIVASSSDDQTVRLWSIQTGECLRTFTGN 744
>gi|119172811|ref|XP_001238951.1| hypothetical protein CIMG_09973 [Coccidioides immitis RS]
Length = 422
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P +S R + +G D +D + PI H V +V +S D +L A+GS D
Sbjct: 153 FSPASSSR-MATGSGDSTARIWDCDTGTPIHTLKGHSSW-VLAVSWSPNDKIL-ATGSMD 209
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF-----GSSLVAAGCADKKAYAYDV 219
T+++WDP+ G+ + ++ + + + P+ G +A+ D +DV
Sbjct: 210 NTVRLWDPKT--GQALGAPLKGHTK-WIMSLAWEPYHLQDPGRPRLASASKDSTVRIWDV 266
Query: 220 -RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
K ++ VL GH+ +V+ +R+ + + T+ D +K+WN D +I+T H + N
Sbjct: 267 VSKRIENVLT--GHKGSVSCVRWGGMARIYTSSHDKTIKIWNPKDGSLIQTLSSHTHRVN 324
Query: 279 FVGLSV 284
+ LS
Sbjct: 325 HLALST 330
>gi|332705517|ref|ZP_08425595.1| WD-40 repeat-containing protein [Moorea producens 3L]
gi|332355877|gb|EGJ35339.1| WD-40 repeat-containing protein [Moorea producens 3L]
Length = 1714
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 29/245 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+ ++ + F P+ + AT I++ N K D A H + L+
Sbjct: 1402 NQAVRSVSFSPNGEMIATASADNTIQLLNRK----DRSRKAFSAHGQ----------GLT 1447
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
++ + P ++ ++ S D V ++L+ + E +VW V +S D L AS
Sbjct: 1448 AISFSPDST--IMASASEDKTVKLWNLDSS--LLHTLEGHQDQVWGVSFSP-DSKLIASA 1502
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD G V T++ + V V F P G +A+ D ++ +
Sbjct: 1503 SADKTVKLWDL---DGTLVKTLE--GHQDKVWGVSFSPDGKQ-IASASNDGTVKLWNTKG 1556
Query: 222 MVDPVLVFDG--HRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ L D H V ++ F D + + +A +DG +KLWN D +++ T KGH N
Sbjct: 1557 KLLKTLEGDNQEHNDAVNWVSFSPDGEMIASASSDGTVKLWN-RDGKLLNTLKGHNGAVN 1615
Query: 279 FVGLS 283
+V S
Sbjct: 1616 WVSFS 1620
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 136 ERDEHGGRRVW--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVC 193
ER+ G R W SV +S D ASGS D T+++W R D G + T++ R+ +
Sbjct: 1105 ERNRLKGHRDWVRSVTFSP-DGQRIASGSRDNTIKLW--RKD-GTLLKTLR--GHRAGIQ 1158
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD---GHRKTVTYIRFL-DVDTLVT 249
V F G ++A+G DK + RK ++ D GH KTV +RF + + +
Sbjct: 1159 SVSFSQDG-QMLASGSEDKTVKLW--RKDGSLIMTLDGPHGHTKTVHCVRFSPNRQMIAS 1215
Query: 250 AGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
A D +KLW+ D ++ T GH + + +G+S+ +G L+ S+ +
Sbjct: 1216 ASEDKTVKLWS-KDGALLHTLTGHSD--SVLGVSISPNGQLIASASKDKTI 1263
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 47/205 (22%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ + SG D + + + + R G + SV +S+ +L ASGS+D T+++W
Sbjct: 1125 GQRIASGSRDNTIKLWRKDGTLLKTLRGHRAG--IQSVSFSQDGQML-ASGSEDKTVKLW 1181
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK--------AYAYDVRKM 222
R DG ++ P V CV F P ++A+ DK A + +
Sbjct: 1182 --RKDGSLIMTLDGPHGHTKTVHCVRFSP-NRQMIASASEDKTVKLWSKDGALLHTLTGH 1238
Query: 223 VDPVL-------------------------------VFDGHRKTVTYIRFL-DVDTLVTA 250
D VL + H K V +RF D T+ +A
Sbjct: 1239 SDSVLGVSISPNGQLIASASKDKTIKLWRRDGTLLKTWQAHTKPVVSVRFSPDGKTIASA 1298
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVN 275
TD +KLW N +I T +GH N
Sbjct: 1299 STDNTVKLWQTN-GELIDTLEGHRN 1322
Score = 45.8 bits (107), Expect = 0.028, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 27/148 (18%)
Query: 144 RVWSVD-------YSKGDPVLG----------ASGSDDGTMQMWDPRCDGGKCVSTVQPS 186
++WS D D VLG AS S D T+++W R DG + T Q
Sbjct: 1223 KLWSKDGALLHTLTGHSDSVLGVSISPNGQLIASASKDKTIKLW--RRDG-TLLKTWQ-- 1277
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVD 245
A V V F P G ++ +A + +++D +GHR V + F D
Sbjct: 1278 AHTKPVVSVRFSPDGKTIASASTDNTVKLWQTNGELID---TLEGHRNWVLDVSFSSDGK 1334
Query: 246 TLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
L TA D +KLWN +D +I T GH
Sbjct: 1335 RLATASADHTIKLWN-SDGELIETLAGH 1361
>gi|167376298|ref|XP_001733943.1| WD repeat-containing protein slp1 [Entamoeba dispar SAW760]
gi|165904776|gb|EDR29932.1| WD repeat-containing protein slp1, putative [Entamoeba dispar
SAW760]
Length = 337
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDG 176
GD GV+ DL + I ER H R ++ + A+GS D T+Q++D RC+
Sbjct: 108 GDVFGVIRVIDLMTQRLIMERQMHTDR----INSLAKNCCTLATGSRDNTVQLFDTRCED 163
Query: 177 GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV 236
C V + VC ++F+ G + + G D D+R M+ P L + H V
Sbjct: 164 IVCSELVY---HKGEVCGIDFNGSG-TYIGTGANDNSVILSDLR-MIKPFLSY-YHNAAV 217
Query: 237 TYIRFLDV-DTLVTAG---TDGCLKLWNVNDSRVIRTYKGH 273
I+F + D ++ G +D +KL N+N++++I K H
Sbjct: 218 KAIKFDPINDNIIATGGGSSDRTIKLMNINNNQLINEIKTH 258
>gi|434387970|ref|YP_007098581.1| WD40 repeat-containing protein [Chamaesiphon minutus PCC 6605]
gi|428018960|gb|AFY95054.1| WD40 repeat-containing protein [Chamaesiphon minutus PCC 6605]
Length = 1221
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 43/296 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + ATGG R +R++ + + D + + + S+ + P
Sbjct: 857 VAFSPDGTNLATGGEDRSVRLWEVST-------------GSCIDIWQGYGSWIQSIAFSP 903
Query: 108 GTSGRVLGSGDYDGVVMEYDL-EKKVPIFERDEHG--GRRVW--SVDYSKGDPVLGASGS 162
G+ L +G D + + L + + R+ G + W SV +S L ASGS
Sbjct: 904 --DGKTLANGSEDKTIRLWQLADARTSATSRNSLTLTGHQGWVCSVAFSPDGKYL-ASGS 960
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+++WD G+C+ T+Q V V F P G +L + G D +D+
Sbjct: 961 SDYTIKLWD--VGTGQCLKTLQ--GHTRWVGAVAFSPSGLTLASCG-GDCTIVLWDIITG 1015
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ + V +GH + ++F D L +A D +KLW++ + T GH + G
Sbjct: 1016 -NCIQVLEGHTGWLWSVQFSPDGRLLASASEDKTIKLWDLQSGKCTHTLSGHTSWVQ--G 1072
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV--------WVHD--FEP---VTAAGS 324
+S G LL S + ++DV GE V WV F P + A+GS
Sbjct: 1073 ISFSPDGKLLASASCDCTIRLWDVATGECVNSLQGHTSWVQSVAFSPDSKILASGS 1128
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 34/271 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
SI + + P+ + ATG + +I +++I + P++ H+
Sbjct: 601 SILALAYSPNGKLLATGDVNGQIYLWDIAT---GEPILCCTGHAG--------------- 642
Query: 104 KWKPGTS----GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
W G + G++L S D V +D + H +RV ++ +S + A
Sbjct: 643 -WVHGLAFSHDGKMLASASSDLTVKLWDTFDGSCLRTFTGHH-QRVRAIAFSPDSQSI-A 699
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD R GKC+ + S +S + V F P G++ +A+G DK +++
Sbjct: 700 SGSSDATIRLWDTR--SGKCLKIL--SGHQSYIWSVAFSPDGTT-IASGSEDKSVRLWNL 754
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ +F H+ V I + L+ +G+ D +K+W + + + T GH
Sbjct: 755 -ATGECRQIFAEHQLWVRTIAWSPDGKLIASGSGDRTVKVWEIETGKCVSTLTGHTQRVR 813
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ S G LL GS V ++ V G+
Sbjct: 814 SIAFS--PDGKLLASGSGDRTVRLWSVTDGQ 842
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 124/320 (38%), Gaps = 84/320 (26%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNI-----KSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ F P + A+G + +R++N+ + + +H + + +
Sbjct: 731 VAFSPDGTTIASGSEDKSVRLWNLATGECRQIFAEHQLW------------------VRT 772
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ W P G+++ SG D V +++E + H +RV S+ +S D L ASGS
Sbjct: 773 IAWSP--DGKLIASGSGDRTVKVWEIETGKCVSTLTGHT-QRVRSIAFSP-DGKLLASGS 828
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAG-------------- 208
D T+++W G+C+ T+ S + V F P G++L G
Sbjct: 829 GDRTVRLWS--VTDGQCLKTLH--GHNSLLTSVAFSPDGTNLATGGEDRSVRLWEVSTGS 884
Query: 209 CAD----------KKAYAYDVRKMVD----------------------PVLVFDGHRKTV 236
C D A++ D + + + L GH+ V
Sbjct: 885 CIDIWQGYGSWIQSIAFSPDGKTLANGSEDKTIRLWQLADARTSATSRNSLTLTGHQGWV 944
Query: 237 TYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL--GC 293
+ F D L + +D +KLW+V + ++T +GH +VG + GL C
Sbjct: 945 CSVAFSPDGKYLASGSSDYTIKLWDVGTGQCLKTLQGHT---RWVGAVAFSPSGLTLASC 1001
Query: 294 GSETNQVFVYDVRWGEPVWV 313
G + + ++D+ G + V
Sbjct: 1002 GGDCT-IVLWDIITGNCIQV 1020
Score = 43.5 bits (101), Expect = 0.17, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 30/177 (16%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P + A+ + I++++++S CT W
Sbjct: 1031 VQFSPDGRLLASASEDKTIKLWDLQSGK-------------------CTHTLSGHTSWVQ 1071
Query: 108 GTS----GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
G S G++L S D + +D+ + H V SV +S +L ASGS
Sbjct: 1072 GISFSPDGKLLASASCDCTIRLWDVATGECVNSLQGHTSW-VQSVAFSPDSKIL-ASGSC 1129
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
D T+++W+P + GKC T+ A +S V V F P G +VA+G D+ +D++
Sbjct: 1130 DRTVKLWNP--NTGKCQQTI--PAHQSWVWSVVFSPNG-KIVASGGQDETIQLWDLK 1181
Score = 42.0 bits (97), Expect = 0.42, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 18/150 (12%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLV 248
+++ + + P G L+A G + + Y +D+ +P+L GH V + F D L
Sbjct: 600 TSILALAYSPNGK-LLATGDVNGQIYLWDI-ATGEPILCCTGHAGWVHGLAFSHDGKMLA 657
Query: 249 TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
+A +D +KLW+ D +RT+ GH + S + GS + ++D R G
Sbjct: 658 SASSDLTVKLWDTFDGSCLRTFTGHHQRVRAIAFSPDSQS--IASGSSDATIRLWDTRSG 715
Query: 309 EP----------VWVHDFEP---VTAAGSE 325
+ +W F P A+GSE
Sbjct: 716 KCLKILSGHQSYIWSVAFSPDGTTIASGSE 745
>gi|427728951|ref|YP_007075188.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
gi|427364870|gb|AFY47591.1| WD40 repeat-containing protein [Nostoc sp. PCC 7524]
Length = 1188
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 66/309 (21%), Positives = 123/309 (39%), Gaps = 30/309 (9%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
F Q A +N++ WD+ + + S +D I I F P ATG
Sbjct: 872 FSSDGQLLASGSNDKTLKLWDWQTGECIKTLSGH----TDFIYGIAFSPDSQTLATGSTD 927
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
+R++ + + + C + ++ + P G+++ SG D V
Sbjct: 928 SSVRLWQVST-------------GQCCQILQGHKDWIDAVAYHP--QGKIIASGSADCTV 972
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
+D + H ++ + +S +L AS S D T+++WD C C+ T+
Sbjct: 973 KLWDESTGQCLHTLTGHT-EKILGIAFSPNGEML-ASASADETVKLWD--CHTNNCIQTI 1028
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL- 242
+R + V F P G + A D+ +D+ + GH V I F
Sbjct: 1029 HAHNAR--IYAVVFEPTGKT-CATASTDQTIKLWDIFT-CKCLKTLTGHSNWVFAIAFSP 1084
Query: 243 DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFV 302
D +TL +A D +++W++ + + GH + + G++ G + GS+ V +
Sbjct: 1085 DGNTLASAAHDQTVRIWDIKTGKCLHICDGHTHLVS--GIAFSPDGQYIASGSQDQTVRI 1142
Query: 303 YDVRWGEPV 311
++ GE V
Sbjct: 1143 WNANTGECV 1151
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L S D V + + V I H ++V +S L AS S D T+++W
Sbjct: 624 GQILASCGADKTVKLWSVRDGVCIKTLTGHE-HETFAVAFSPDSQTL-ASASGDRTIKLW 681
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL--V 228
D G+C T+ + + V CV F P G +L A+G AD + + K+ D
Sbjct: 682 D--IPDGQCWQTL--TGHQDWVRCVAFSPDGQTL-ASGSAD---HTIKLWKIPDGQCWHT 733
Query: 229 FDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
D H+ V + F + ++ +G+ D +K W+ + + ++TY GH N V S
Sbjct: 734 LDTHQGGVRSVAFSPHEGILASGSSDRTIKFWDYSTGKCLKTYTGHTNGVYSVAFSPQDK 793
Query: 288 GGLLGCGSETNQVF 301
+ G G T +++
Sbjct: 794 TLISGSGDHTVKLW 807
Score = 44.3 bits (103), Expect = 0.089, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 113/310 (36%), Gaps = 68/310 (21%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
D + + F P A+G I+++ I D +D + + S
Sbjct: 697 DWVRCVAFSPDGQTLASGSADHTIKLWKIP----DGQCWHTLDTHQ---------GGVRS 743
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ + P GS D +Y K + + +G V+SV +S D L SGS
Sbjct: 744 VAFSPHEGILASGSSDRTIKFWDYSTGKCLKTYTGHTNG---VYSVAFSPQDKTL-ISGS 799
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV----------------- 205
D T+++WD + C+ T+ + VC V F P G +LV
Sbjct: 800 GDHTVKLWDTQTH--TCIKTLH--GHTNEVCSVAFSPDGKTLVCVSLDQTVRLWDAHTGQ 855
Query: 206 ------------------------AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF 241
A+G DK +D + + + GH + I F
Sbjct: 856 CWKTWYGNTDWALPVAFSSDGQLLASGSNDKTLKLWDWQTG-ECIKTLSGHTDFIYGIAF 914
Query: 242 L-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-HGGLLGCGSETNQ 299
D TL T TD ++LW V+ + + +GH ++++ + G ++ GS
Sbjct: 915 SPDSQTLATGSTDSSVRLWQVSTGQCCQILQGH---KDWIDAVAYHPQGKIIASGSADCT 971
Query: 300 VFVYDVRWGE 309
V ++D G+
Sbjct: 972 VKLWDESTGQ 981
>gi|326426631|gb|EGD72201.1| hypothetical protein PTSG_00223 [Salpingoeca sp. ATCC 50818]
Length = 587
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V +V + D + A+GS GT+++W+ D K T+ + +S + C+EFHPFG
Sbjct: 61 VEAVQFDSHDQTV-AAGSSSGTLKIWN--IDQPKKSHTL--TGHKSNIRCLEFHPFGE-F 114
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A+G D +D+++ + + GH + +RF D +V+ DG +KLW++
Sbjct: 115 IASGSLDTNLKIWDIKRK-GCIQTYKGHTDAINCLRFSPDGHWVVSGSEDGAIKLWDLTA 173
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
++I ++ H L + LL GS V +D+
Sbjct: 174 GKLITEFREH--RAGITSLEFHPNEFLLASGSADRTVKFWDL 213
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 22/179 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
++ ++FD D A G + ++I+NI D K + + L
Sbjct: 60 AVEAVQFDSHDQTVAAGSSSGTLKIWNI-------------DQPKKSHTLTGHKSNIRCL 106
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
++ P G + SG D + +D+++K I H + + +S D SGS+
Sbjct: 107 EFHP--FGEFIASGSLDTNLKIWDIKRKGCIQTYKGHTD-AINCLRFSP-DGHWVVSGSE 162
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DG +++WD GK ++ + R+ + +EFHP L+A+G AD+ +D+
Sbjct: 163 DGAIKLWD--LTAGKLITEFR--EHRAGITSLEFHP-NEFLLASGSADRTVKFWDLESF 216
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
V CV +A G D+K + + V + GH V ++F D V AG
Sbjct: 18 VNCVSIGRSSHRFIATGGDDRKVNIWTIGNPAARVSLV-GHTTAVEAVQFDSHDQTVAAG 76
Query: 252 TD-GCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ G LK+WN++ + T GH N L G + GS + ++D++
Sbjct: 77 SSSGTLKIWNIDQPKKSHTLTGH--KSNIRCLEFHPFGEFIASGSLDTNLKIWDIK 130
>gi|357140774|ref|XP_003571938.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Brachypodium distachyon]
Length = 828
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 18/182 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
V SV + + ++GA G+ GT+++WD + K V T + RS ++FHPFG
Sbjct: 76 VESVSFDSSEVMIGA-GAASGTIKIWD--IEEAKVVRTF--TGHRSNCVSLDFHPFGE-F 129
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
A+G +D +D+RK + + GH + + +RF D +V+ G D +K+W++
Sbjct: 130 FASGSSDTNMKIWDMRKK-RCIHTYQGHTRRIDVLRFTPDGRWIVSGGADNSVKIWDLTA 188
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
+++ + H N L H LL GS V +D + FE + ++G
Sbjct: 189 GKLLHDFTLHEGPVNC--LDFHPHEFLLATGSADKTVKFWD--------LETFELIGSSG 238
Query: 324 SE 325
E
Sbjct: 239 PE 240
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 190 SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVT 249
S V C +F S ++ G D+K + V K +L G V + F + ++
Sbjct: 31 SDVNCAKFGRQTSRVLITGGDDQKINLWAVGK-PSAILSLSGLTSPVESVSFDSSEVMIG 89
Query: 250 AGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
AG G +K+W++ +++V+RT+ GH N V L G GS + ++D+R
Sbjct: 90 AGAASGTIKIWDIEEAKVVRTFTGH--RSNCVSLDFHPFGEFFASGSSDTNMKIWDMR 145
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 27/214 (12%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
++G+G G + +D+E+ + H V S+D+ ASGS D M++WD
Sbjct: 87 MIGAGAASGTIKIWDIEEAKVVRTFTGHRSNCV-SLDFHPFGEFF-ASGSSDTNMKIWDM 144
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDPVLVFD 230
R +C+ T Q R V + F P G +V+ G AD +D+ K++ F
Sbjct: 145 R--KKRCIHTYQGHTRRIDV--LRFTPDGRWIVSGG-ADNSVKIWDLTAGKLLHD---FT 196
Query: 231 GHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFV-------GL 282
H V + F + L+ G+ D +K W++ +I + G N R + +
Sbjct: 197 LHEGPVNCLDFHPHEFLLATGSADKTVKFWDLETFELIGS-SGPENCREYYEPASVVRSM 255
Query: 283 SVWRHGGLLGCG-SETNQVFVYDVRWGEPVWVHD 315
+ G L CG E+ +V + EP+ HD
Sbjct: 256 TFNSDGKALFCGLHESLKVLSW-----EPIICHD 284
>gi|291566054|dbj|BAI88326.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
platensis NIES-39]
Length = 770
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 118/273 (43%), Gaps = 34/273 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+S+ + F P + A+G + I+++++ + + + D +
Sbjct: 488 SNSVYSVAFSPDNQTLASGSSDKTIKLWDVTTGKLRETLTGHSDWVSSVAF--------- 538
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGA 159
G+ L SG D + +D+ R+ G W SV +S+ L A
Sbjct: 539 ------SRDGQTLCSGSGDNTIKLWDVTTGKL---RETLTGHPDWVRSVAFSRDGHTL-A 588
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D T+++WD R GK T+ + R V V F G +L A+G +DK ++V
Sbjct: 589 SGSFDKTIKLWDVRT--GKVRHTLTGHSDR--VYSVAFSRDGQTL-ASGSSDKTIKLWEV 643
Query: 220 R--KMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+ K+ + GH V + F D TL +A D +KLW+V ++ T GH
Sbjct: 644 KTGKLRE---TLTGHSDWVRSVAFSRDGKTLASASFDKTVKLWDVRTGQLRHTLTGHYGW 700
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
V S R G L GS N + ++DVR G+
Sbjct: 701 VWSVAFS--RDGQTLASGSLDNTIKLWDVRTGK 731
>gi|115469284|ref|NP_001058241.1| Os06g0653800 [Oryza sativa Japonica Group]
gi|51535047|dbj|BAD37418.1| putative U5 snRNP-specific 40 kDa protein [Oryza sativa Japonica
Group]
gi|51535597|dbj|BAD37540.1| putative U5 snRNP-specific 40 kDa protein [Oryza sativa Japonica
Group]
gi|113596281|dbj|BAF20155.1| Os06g0653800 [Oryza sativa Japonica Group]
gi|215737249|dbj|BAG96178.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767267|dbj|BAG99495.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 343
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 29/265 (10%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F+P+ +V A+G + I ++ + H +Y + K + L +
Sbjct: 59 MKFNPAGTVIASGSHDKDIFLWYV--------------HGDCKNYMVLRGHKNAVLDLQW 104
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
T G + S D V +D+E + + EH V S ++ P L SGSDDGT
Sbjct: 105 TTDGTQIISASPDKTVRVWDVETGKQVKKMAEHSSF-VNSCCPARKWPPLVVSGSDDGTA 163
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD R G +Q + + V F + G D +D+RK +
Sbjct: 164 KLWDLRQRGA-----IQTLPDKYQITAVSFSEAADKVFTGGL-DNDVKWWDLRKN-EVTE 216
Query: 228 VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFV 280
GH+ +T ++ D L+T D LK+W++ ++R I+T GH +N +N +
Sbjct: 217 YLKGHQDMITGMQLSPDGSYLLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLL 276
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDV 305
S + GS V+++D
Sbjct: 277 KCSWSPDNRKVTAGSADRMVYIWDT 301
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDV 244
+ +SAV C++F+P G +++A+G DK + + V +V GH+ V +++ D
Sbjct: 50 TGHQSAVYCMKFNPAG-TVIASGSHDKDIFLWYVHGDCKNYMVLRGHKNAVLDLQWTTDG 108
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+++A D +++W+V + ++ H
Sbjct: 109 TQIISASPDKTVRVWDVETGKQVKKMAEH 137
>gi|444523853|gb|ELV13649.1| WD repeat-containing protein 5B [Tupaia chinensis]
Length = 329
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L SGS D ++++W+ + GKC+ T+ SA V V F+ GS L+ +G D
Sbjct: 138 LIISGSFDESVKIWEVK--TGKCLKTL--SAHSDPVSAVHFNCSGS-LIVSGSYDGLCRI 192
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+D + + V++++F + ++TA D LKLW+ + R ++TY GH N
Sbjct: 193 WDAASGQCLKTLVEDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKN 252
Query: 276 NRNFVGLSVWRHGG-LLGCGSETNQVFVYDVRWGEPV 311
+ V S GG + CGSE N V++++++ E V
Sbjct: 253 EKYCVFASFSVTGGKWIVCGSEDNLVYIWNLQTKEIV 289
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD----- 245
AV V+F P G L A+ ADK +V V+DG + Y L++
Sbjct: 42 AVSSVKFSPNGEWL-ASSSADK---------LVKIWGVYDGQCEKTLYGHNLEISDVAWS 91
Query: 246 ----TLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
LV+A D LK+W+V + ++T KGH N
Sbjct: 92 SDSSRLVSASDDKTLKIWDVTSGKCLKTLKGHSN 125
>gi|428313887|ref|YP_007124864.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
gi|428255499|gb|AFZ21458.1| WD40 repeat-containing protein [Microcoleus sp. PCC 7113]
Length = 422
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 33/275 (12%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
S+ I P A+G R + ++N+K+ K + ++S++
Sbjct: 68 SVNTITISPDGQTLASGSQDRTVSLWNLKT-------------GKRIFTFFGQAGEVSTV 114
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPI---FERDE---HGGRRVWSVDYSKGDPVL 157
P G+ L +G +D + + +E K I F + H G V SV +S+ +L
Sbjct: 115 AISP--DGKTLVAGGFDNKISSWRIETKELICSFFYLNSPYSHSGF-VSSVAFSRERRIL 171
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAY 217
AS S D T+++W G+ T+ + + + P +LV+ G ADK +
Sbjct: 172 -ASASGDQTIRLWGGYT--GEFKRTL--NGHSDTIWSIAISPDHQTLVS-GSADKTIRIW 225
Query: 218 DVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
+ ++ P + GH VT + D +TL + TDG +K WN++ ++RT + +
Sbjct: 226 SLNRLAQP-RILSGHSSWVTSVAISADGNTLASGSTDGTIKFWNLHSGELLRTIESQ--S 282
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
+++ +G +L GS +V ++++ GE +
Sbjct: 283 TEIFAVAMTPNGQILASGS-MKEVKLWNIDTGELI 316
>gi|389747522|gb|EIM88700.1| WD40 repeat-like protein [Stereum hirsutum FP-91666 SS1]
Length = 794
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 53 SDSVFATGGIARKIRIYNIKS-----VLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+D + G R +IY+ K+ L+D D +K D YI S+ + P
Sbjct: 486 ADGKYLATGCNRSAQIYDTKTGAKTCTLIDR------DANKTGDLYI------RSVCFSP 533
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L +G D + +D++ + D H + ++S+D+S+ D L SGS D T
Sbjct: 534 --DGKYLATGAEDKQIRIWDIKTQRIRNIFDGHQ-QEIYSLDFSR-DGRLIVSGSGDKTA 589
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR--KMVDP 225
++WD + K ++ +P A S V V P G LVAAG D +DV+ ++V+
Sbjct: 590 RIWDMQDGSSKTLTIHEPEAPDSGVTSVAISPDG-RLVAAGSLDTIVRIWDVQTGQLVE- 647
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
GH+ +V + F D LV+ D LK W+V
Sbjct: 648 --RLKGHKDSVYSVAFTPDGKGLVSGSLDKTLKYWDV 682
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
P L GSD +++P+ V+ V S VCCV F G L A GC ++ A
Sbjct: 444 PELKKEGSD--WFAVFNPKVKRVLDVNLVHTLMHESVVCCVRFSADGKYL-ATGC-NRSA 499
Query: 215 YAYDVRKMVDPVLVF--DGHRKTVTYIRFL----DVDTLVTAGTDGCLKLWNVNDSRVIR 268
YD + + D ++ YIR + D L T D +++W++ R+
Sbjct: 500 QIYDTKTGAKTCTLIDRDANKTGDLYIRSVCFSPDGKYLATGAEDKQIRIWDIKTQRIRN 559
Query: 269 TYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP 318
+ GH + L R G L+ GS ++D++ G + EP
Sbjct: 560 IFDGH--QQEIYSLDFSRDGRLIVSGSGDKTARIWDMQDGSSKTLTIHEP 607
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 110/274 (40%), Gaps = 51/274 (18%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P ATG ++IRI++IK+ ++ + + ++ SL +
Sbjct: 531 FSPDGKYLATGAEDKQIRIWDIKT-------------QRIRNIFDGHQQEIYSLDFS--R 575
Query: 110 SGRVLGSGDYDGVVMEYDLE---KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
GR++ SG D +D++ K E V SV S D L A+GS D
Sbjct: 576 DGRLIVSGSGDKTARIWDMQDGSSKTLTIHEPEAPDSGVTSVAISP-DGRLVAAGSLDTI 634
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV--- 223
+++WD G+ V ++ + +V V F P G LV +G DK +DVR M+
Sbjct: 635 VRIWD--VQTGQLVERLK--GHKDSVYSVAFTPDGKGLV-SGSLDKTLKYWDVRPMLAMA 689
Query: 224 ---------------------DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+ ++ F GH+ V + D +V+ D ++ W+
Sbjct: 690 GKMVPGPGSTPNGKKEGGEKSNCMMNFTGHKDYVLSVAVSHDGQWVVSGSKDRGVQFWDA 749
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
+ V +GH N + + + + G +L GS
Sbjct: 750 RSAIVQLMLQGHKN--SVISIDLSPAGSVLATGS 781
>gi|281204506|gb|EFA78701.1| hypothetical protein PPL_08162 [Polysphondylium pallidum PN500]
Length = 584
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 90 CDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVD 149
C + + +P+ + S ++ G L +G D V +D E P+ EH V SV
Sbjct: 302 CLFPMDSPSPVISASYQSGK----LATGSSDKSVRLWDCETHKPLMAMTEHTSG-VNSVQ 356
Query: 150 YSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC 209
Y++ D ++ S S D T ++WDPR GK + V+ P GS + G
Sbjct: 357 YNQQDNII-LSASWDKTAKVWDPR--SGKSAIMTLKGHTNGIRSVVQRKP-GS--IVTGS 410
Query: 210 ADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRT 269
ADK +D+ GH + Y ++ L++A D ++LWNV++S ++T
Sbjct: 411 ADKTIMVWDLATQT-ATHTLKGHSNGI-YQLNMNNSYLLSASGDNTVRLWNVDNSETVKT 468
Query: 270 YKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
GH + + +G ++ Q V+D+ G+ ++
Sbjct: 469 LNGHERDV----YCIHSYGSIVASSGADKQTRVWDLSSGQCLY 507
>gi|190896158|gb|ACE96592.1| U5 snRNP-specific protein-like factor [Populus tremula]
gi|190896166|gb|ACE96596.1| U5 snRNP-specific protein-like factor [Populus tremula]
Length = 215
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + S D V +D+E I + EH V S S+ P L SGSDDGT ++W
Sbjct: 23 GSQIISASPDKTVRAWDVETGKQIKKMAEHSSF-VNSCCPSRRGPPLVVSGSDDGTSKLW 81
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D R G +Q + + V F S + G D +D+RK + + +
Sbjct: 82 DLRQKGA-----IQTFPDKYQITAVSFSD-ASDKIFTGGIDNDVKVWDIRKG-EVTMTLE 134
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN--RNFVGLS 283
GH+ +T ++ D L+T G D L +W++ +R ++ ++GH +N ++ + S
Sbjct: 135 GHQDMITSMQLSPDGSYLLTNGMDNKLCIWDMRPYAPQNRCVKIFEGHQHNFEKHLLKCS 194
Query: 284 VWRHGGLLGCGSETNQVFVYD 304
G + GS V+++D
Sbjct: 195 WSPDGSKVTAGSADRMVYIWD 215
>gi|19112474|ref|NP_595682.1| WD repeat protein Pop3 [Schizosaccharomyces pombe 972h-]
gi|51701724|sp|O74184.1|WAT1_SCHPO RecName: Full=WD repeat-containing protein wat1; AltName: Full=WD
repeat-containing protein pop3
gi|3434986|dbj|BAA32427.1| Pop3 [Schizosaccharomyces pombe]
gi|6018741|emb|CAB57925.1| WD repeat protein Pop3 [Schizosaccharomyces pombe]
Length = 314
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
SV Y VL S D T++ W+ G C T+Q + S+ C+ P L A
Sbjct: 2 SVQYPPQHSVLLVSSGYDHTIRFWEAL--SGICSRTIQHADSQVNRLCIS--PDKKFLAA 57
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSR 265
AG + Y + + P++ F+GH VT I F D L T+ DG +K+W++
Sbjct: 58 AGNPHVRLYDINTSSQM-PLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPS 116
Query: 266 VIRTY--KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
V R Y K VN+ L G LL C ++ +V +D+ GE H+ P
Sbjct: 117 VQRNYDHKSPVNDL----LIHPNQGELLSC-DQSGRVRAWDL--GENSCTHELIP----- 164
Query: 324 SERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
E +SS+ VG D L+AG + G +V+
Sbjct: 165 EEDVPMSSIT---VGSDGSMLIAGNNKGNCYVW 194
>gi|428205737|ref|YP_007090090.1| WD40 repeat, subgroup [Chroococcidiopsis thermalis PCC 7203]
gi|428007658|gb|AFY86221.1| WD40 repeat, subgroup [Chroococcidiopsis thermalis PCC 7203]
Length = 641
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 25/263 (9%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P + A+ G R I+++++K+ + ++D + S+ P
Sbjct: 366 LAFSPDSQILASCGNDRAIKLWSLKT---GELIRTILD---------AHAGAIWSVAIDP 413
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G G L SG D + +DL+ PI H V +V S D + SGS D T+
Sbjct: 414 G--GDKLISGSSDRTIKVWDLQTGEPIRTLRGHTDT-VRAVAVSPDDKHI-VSGSSDRTI 469
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD G + T+ S SAV V P G ++V+ G AD +++ +
Sbjct: 470 KVWD--LSTGVLLRTL--SGHTSAVRAVAISPNGYTIVSGG-ADNLVRVWNLNTG-QLLS 523
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
GH V I D + + + G D ++LWN+ ++ T KGH ++ N L+
Sbjct: 524 TLQGHTSRVIAIAMSPDGNIVASGGNDNTIRLWNLQTGDLLHTLKGHSDHIN--SLTFRA 581
Query: 287 HGGLLGCGSETNQVFVYDVRWGE 309
G +L G+E + + +++ R GE
Sbjct: 582 DGQVLISGAEDHSIKLWNPRSGE 604
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 99/213 (46%), Gaps = 20/213 (9%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VWS+ +S +L + G+D +++W + G+ + T+ A A+ V P G L
Sbjct: 363 VWSLAFSPDSQILASCGNDRA-IKLWSLKT--GELIRTIL-DAHAGAIWSVAIDPGGDKL 418
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG-TDGCLKLWNVND 263
+ +G +D+ +D++ +P+ GH TV + D + +G +D +K+W+++
Sbjct: 419 I-SGSSDRTIKVWDLQTG-EPIRTLRGHTDTVRAVAVSPDDKHIVSGSSDRTIKVWDLST 476
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
++RT GH + V +S +G + G N V V+++ G+ +
Sbjct: 477 GVLLRTLSGHTSAVRAVAIS--PNGYTIVSGGADNLVRVWNLNTGQLL-----------S 523
Query: 324 SERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ +G S V + D + +GG+D + ++
Sbjct: 524 TLQGHTSRVIAIAMSPDGNIVASGGNDNTIRLW 556
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 106/271 (39%), Gaps = 27/271 (9%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
F Q A N+RA W + + +A +I + DP +G
Sbjct: 368 FSPDSQILASCGNDRAIKLWSLKTGELIRTILDAHAG---AIWSVAIDPGGDKLISGSSD 424
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
R I+++++++ P+ + H+ +P + + SG D +
Sbjct: 425 RTIKVWDLQT---GEPIRTLRGHTDTVRAVAVSP------------DDKHIVSGSSDRTI 469
Query: 124 MEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTV 183
+DL V + H V +V S + SG D +++W+ + G+ +ST+
Sbjct: 470 KVWDLSTGVLLRTLSGHTSA-VRAVAISPNGYTI-VSGGADNLVRVWN--LNTGQLLSTL 525
Query: 184 QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-L 242
Q SR V + P G+ +VA+G D ++++ D + GH + + F
Sbjct: 526 QGHTSR--VIAIAMSPDGN-IVASGGNDNTIRLWNLQTG-DLLHTLKGHSDHINSLTFRA 581
Query: 243 DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
D L++ D +KLWN ++ T H
Sbjct: 582 DGQVLISGAEDHSIKLWNPRSGELLNTLSKH 612
>gi|443475942|ref|ZP_21065871.1| WD-40 repeat-containing protein [Pseudanabaena biceps PCC 7429]
gi|443019138|gb|ELS33275.1| WD-40 repeat-containing protein [Pseudanabaena biceps PCC 7429]
Length = 1246
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 26/227 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F+P S+ A+ I + I++++ V+ D YI + S+ + P
Sbjct: 634 VSFNPEGSILASSSIDQSIKLWD----------VSTGDCLNTLQGYI---GAVMSVAFSP 680
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G +L SG D V + + + IF E V +V +S +L AS SDD T+
Sbjct: 681 --DGTILASGHADRTVRLWKSGQCIKIFHGHED---IVEAVTFSNQGNLL-ASSSDDCTV 734
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD D G+C+ ++ + + F S+++A+G DK ++V + + +
Sbjct: 735 RIWD--IDQGECIRMLE--GHEDIIWSIAFSK-SSNVLASGSEDKTTRLWNV-ETGNCIK 788
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
F GH TV + F D TL T D ++LW++ ++ +T GH
Sbjct: 789 TFTGHTHTVFAVDFSHDGSTLATGSGDRTIRLWDLKTAQCFKTLTGH 835
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 34/231 (14%)
Query: 48 IEFDPSDSVFATGGIARKIRIYN----IKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
+ F P ++ A+G R +R++ IK +V V S
Sbjct: 676 VAFSPDGTILASGHADRTVRLWKSGQCIKIFHGHEDIVEAVTFSN--------------- 720
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
G +L S D V +D+++ I + H +WS+ +SK VL ASGS+
Sbjct: 721 ------QGNLLASSSDDCTVRIWDIDQGECIRMLEGHEDI-IWSIAFSKSSNVL-ASGSE 772
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
D T ++W+ + G C+ T + V V+F GS+L A G D+ +D+ K
Sbjct: 773 DKTTRLWN--VETGNCIKTF--TGHTHTVFAVDFSHDGSTL-ATGSGDRTIRLWDL-KTA 826
Query: 224 DPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GH V + F L ++ D +KLW ++ +RT++GH
Sbjct: 827 QCFKTLTGHNHWVRSVAFHPTRLELASSSGDEMVKLWEIDTGFCMRTFQGH 877
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 55/239 (23%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++L GD G + + + P+ H G V SV ++ +L AS S D ++++W
Sbjct: 598 GKLLAIGDTKGDIHLWRVSDGKPLLTYRGHKGWVV-SVSFNPEGSIL-ASSSIDQSIKLW 655
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G C++T+Q AV V F P G+ ++A+G AD+ + + + +F
Sbjct: 656 D--VSTGDCLNTLQ--GYIGAVMSVAFSPDGT-ILASGHADRTVRLWKSGQCIK---IFH 707
Query: 231 GHRKTVTYIRFLDVDTLVTAGTDGCL---------------------------------- 256
GH V + F + L+ + +D C
Sbjct: 708 GHEDIVEAVTFSNQGNLLASSSDDCTVRIWDIDQGECIRMLEGHEDIIWSIAFSKSSNVL 767
Query: 257 ---------KLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+LWNV I+T+ GH + V S G L GS + ++D++
Sbjct: 768 ASGSEDKTTRLWNVETGNCIKTFTGHTHTVFAVDFS--HDGSTLATGSGDRTIRLWDLK 824
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 110/271 (40%), Gaps = 29/271 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+ ++ ++F S ATG R IR++++K+ + H+ P +L
Sbjct: 794 THTVFAVDFSHDGSTLATGSGDRTIRLWDLKTA---QCFKTLTGHNHWVRSVAFHPTRLE 850
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L S D +V ++++ + H GR WS ++ D +
Sbjct: 851 ------------LASSSGDEMVKLWEIDTGFCMRTFQGHTGRS-WSTPSNQNDSQTSGNI 897
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQ--PSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S++ + +W+ G+ +Q +A RS V +E SL+A+G D +D+
Sbjct: 898 SNEHLLNLWE--VTSGQQFRILQGYTNAIRSVVFNLE-----QSLLASGGDDSIIRLWDI 950
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGC-LKLWNVNDSRVIRTYKGHVNNRN 278
+ + GH V + F TL+ + + C +KLW+V+ + T H +
Sbjct: 951 QSG-KCIRALHGHAGHVWQVAFSPSGTLLASCAEDCTIKLWDVSSGNCLATISEHPDLAR 1009
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ S G LL G + ++ + D+ GE
Sbjct: 1010 TLIFS--HDGKLLATGETSKEIKLRDIVTGE 1038
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTV-QPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
S S D T+++WD G C+ T+ Q ++ S + + HP + GC +K Y ++
Sbjct: 1064 SSSRDKTVKIWDTHT--GNCLHTLNQLTSLTSNITFMPLHPH----LVFGCGEKFIYRWN 1117
Query: 219 VR--KMVDPVLVFDGHRKTVTYIRFLDVD----TLVTAGTDGCLKLWNVNDSRVIRTYKG 272
++ ++V L DG+ T+ D L +AG D + +W+ + I G
Sbjct: 1118 IQNGELVSEGLGHDGNILTIA------ADPKGILLASAGEDAKINIWDWQSGKPINKLVG 1171
Query: 273 HVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
H V S G L S V ++DV+ GE
Sbjct: 1172 HTGTVYAVKFST--DGNFLASSSRDETVKLWDVKTGE 1206
>gi|422295142|gb|EKU22441.1| retinoblastoma binding protein 4, partial [Nannochloropsis gaditana
CCMP526]
Length = 421
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFE--RDEHGGRRVWS-VDYSKGDPVLGA 159
L W P G++L SG D V +D+ + + E R G V V + P L
Sbjct: 188 LAWSPAAPGQLL-SGSDDARVCLWDMTQAGRMVEEVRVFRGHTSVVEDVAWHSAHPHLFG 246
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S SDD ++ +WD R + G S + A V C+ F P L G AD+ +D+
Sbjct: 247 SVSDDKSLALWDVR-ESGSQPSHARAGAHEDFVNCLSFSPHSDFLFLTGSADRSVRLWDL 305
Query: 220 RKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNV 261
R + P+ F+GH V +++ + + G D + +W++
Sbjct: 306 RSLSAPLHTFEGHEDEVFQVKWAPFHENVFASCGADRRVNVWDI 349
>gi|376002756|ref|ZP_09780578.1| WD-40 repeat protein [Arthrospira sp. PCC 8005]
gi|375328812|emb|CCE16331.1| WD-40 repeat protein [Arthrospira sp. PCC 8005]
Length = 1729
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 30/261 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P + A+ G R IR++N++ ++ H+ L+
Sbjct: 1170 TDRVKSVRFSPDGKMIASAGSDRTIRLWNLQGEIIR---TIRFRHT-----------ALT 1215
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLE-KKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
+ + P G +L + G V ++ + +++ ++ +++V++S + S
Sbjct: 1216 WINFSP--DGEILAAAANQGDVQFFNQQGRRLMSITHTKNRDSVIYAVNFSPNGQFIATS 1273
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
G+ DGT+++W + G+ + T+Q V CV F G +L AG +DK +
Sbjct: 1274 GT-DGTVKLWTRQ---GELIRTLQ--VDEDIVFCVSFSGDGRTLATAG-SDKTVKVWSWE 1326
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVD-TLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ + F GH VT +RF D TL ++ D +KLWN++ + T K H N
Sbjct: 1327 GEL--LQTFRGHGDKVTRVRFSPDDRTLASSSYDKTVKLWNLH-TNPRATLKSH--NDRV 1381
Query: 280 VGLSVWRHGGLLGCGSETNQV 300
+ +S G +L GS+ V
Sbjct: 1382 LDVSFSPDGQILASGSQDTTV 1402
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VW V YS +L AS S D T+++W P GK ++T+ + V ++F G L
Sbjct: 1091 VWDVVYSPTGDIL-ASASTDNTIRLWTPE---GKAIATL--TGHHHNVTSLDFSSCGQML 1144
Query: 205 VAAGCADK-KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
V+A K ++ D + + F GH V +RF D + +AG+D ++LWN+
Sbjct: 1145 VSASDDHTVKLWSRDGKLLK----TFIGHTDRVKSVRFSPDGKMIASAGSDRTIRLWNLQ 1200
Query: 263 DSRVIRTYK 271
+IRT +
Sbjct: 1201 -GEIIRTIR 1208
Score = 46.2 bits (108), Expect = 0.026, Method: Composition-based stats.
Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 26/238 (10%)
Query: 72 KSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKK 131
KS+ V PV +V H+ + ++ + P G + +G DG + + + +
Sbjct: 1476 KSLFVPSPVATLVGHTD----------SVMTVTYSP--DGEYILTGSKDGTIKLWTADGQ 1523
Query: 132 VPIFERDEHGGRR-VWSVDYSKGDPVLGASGSDDGTMQMW--DPRCDGGKCVSTVQPSAS 188
F R G + V V +S D S SDDGT+ +W DP + T+Q A
Sbjct: 1524 ---FLRTIRGHQEWVNQVSFSP-DSRTVISASDDGTLILWKWDPANTMLDRLKTIQ--AH 1577
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
S V V F P G + +AG + +++ +L G +VT + F +LV
Sbjct: 1578 ESYVLGVNFSPDGKVIASAGYDNTVKLWTQEGVLLNTLL--KGTSDSVTRVVFSPDGSLV 1635
Query: 249 -TAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+A D +++W+ D +++T GH + + + L+ G L S + V ++++
Sbjct: 1636 ASASYDSHVRIWSAKDGTLLKTLMGHGD--SVMSLTFSPDGRTLASASRDHSVILWNL 1691
>gi|414079645|ref|YP_007001069.1| WD-40 repeat-containing serine/threonine protein kinase [Anabaena
sp. 90]
gi|413972924|gb|AFW97012.1| WD-40 repeat-containing serine/threonine protein kinase [Anabaena
sp. 90]
Length = 650
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 143/316 (45%), Gaps = 39/316 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S I + F P+ A+G +++++++ L+ ++ HSKV +
Sbjct: 370 SQYITSVVFSPNGQTLASGSADTIVKLWDVRGRLLQ----TLMGHSKV-----------N 414
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+ + P G++L G D + +++ + + +H V SV YS L ASG
Sbjct: 415 SVAFSP--DGQILAIGRDDNTIKIWNVSTERLLQTLTDHSDS-VNSVAYSPDGQTL-ASG 470
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++W+ GK + T+ + S V V + P G ++A+G D ++ +
Sbjct: 471 SLDRTIKIWN--VTTGKLLQTL--TGHSSWVRYVAYSPDGQ-ILASGSDDNTIKIWN-KP 524
Query: 222 MVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
+ F GH V Y+ + D L ++ D +K+W+V ++++T GH N V
Sbjct: 525 TGQLLQTFTGHSSWVRYVAYSPDGQNLASSSGDRTIKIWSVTTGKLLQTLTGHSGTVNSV 584
Query: 281 GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
S G L GS + +++V G+ + + +T S +V SV + G+
Sbjct: 585 AYS--PDGQTLASGSLDRTIKIWNVTTGKLL-----QTLTGHSS---WVRSVTYSPDGQ- 633
Query: 341 ECTLVAGGSDGLLHVF 356
+L +G DG ++++
Sbjct: 634 --SLASGSDDGTINIW 647
>gi|301783725|ref|XP_002927275.1| PREDICTED: WD repeat-containing protein 5B-like [Ailuropoda
melanoleuca]
gi|281354018|gb|EFB29602.1| hypothetical protein PANDA_017033 [Ailuropoda melanoleuca]
Length = 330
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D V++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADKVIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKIWDVR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDESVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGVCRIWDAASGQCLKTLVDDDNA 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
+++++F + L+ A D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PISFVKFSPNGKYLLIATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
>gi|281206025|gb|EFA80214.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
Length = 966
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 113 VLGSGDYDGVVMEYDLEKKV---PIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+ GSG+ + ++L+K+ +FE D + ++ D L A+G +DG++++
Sbjct: 32 ITGSGERISI---WNLKKQTLERSLFEEDTNSEIATLALS---NDGELLAAGHNDGSIRL 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
W R + V+ + R +VC + F+ GS LV+ G D + +D+ +
Sbjct: 86 WSMR--EYQLVAVF--NGHRGSVCALHFNQLGSQLVS-GSKDTEIIVWDIITETG-LYRL 139
Query: 230 DGHRKTVTYIRFLD-VDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
GHR VT +R L+ + LV++ DG +K+W + I+T GH N
Sbjct: 140 RGHRDMVTAVRLLEKTNRLVSSSKDGLIKIWELETQHCIQTIVGHRN 186
>gi|75911228|ref|YP_325524.1| pentapeptide repeat-containing protein [Anabaena variabilis ATCC
29413]
gi|75704953|gb|ABA24629.1| Pentapeptide repeat protein [Anabaena variabilis ATCC 29413]
Length = 1190
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G + GD G++ + + + + H VWSV +S L +SGSD ++++W
Sbjct: 574 GETVAVGDSTGLIYLWQITTTKLLATFEGHTSW-VWSVAFSPDGHKLASSGSDT-SIRLW 631
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+C+ + + V V F P G L A+G D+ ++++ D + V
Sbjct: 632 D--VQSGQCLRVL--TEHTGCVWSVNFSPDGQRL-ASGSDDQTVRVWNLQG--DCLQVLK 684
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV--------- 280
GH K V + F D TL + D +++WNV D + +GH + V
Sbjct: 685 GHTKNVYSVHFSPDHQTLASGSKDESIRIWNVIDGNCLNVLQGHTEGVHCVRYSPDGQLL 744
Query: 281 -----GLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEP---VTAAGSERGFVSSV 332
G S+ G L + ++V W VW F P + A+GS+ G +
Sbjct: 745 ASGSFGGSIRLWSGQLHTNAYQSKVLHGHTNW---VWSMAFSPDGGILASGSDDGTLR-- 799
Query: 333 CWRRVGEDEC-TLVAGGSDGLLHVFVGKKKPLSA 365
W V + +C +++G +D +L + + + +SA
Sbjct: 800 LW-NVQDGQCINVLSGHTDDVLAIAIRGQLMVSA 832
Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 30/261 (11%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
+ F P A+ G IR+++++S + V+ C + S+ + P
Sbjct: 610 VAFSPDGHKLASSGSDTSIRLWDVQS----GQCLRVLTEHTGCVW---------SVNFSP 656
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
G+ L SG D V ++L+ + + + V+SV +S L ASGS D ++
Sbjct: 657 --DGQRLASGSDDQTVRVWNLQGDC--LQVLKGHTKNVYSVHFSPDHQTL-ASGSKDESI 711
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC--ADKKAYAYDVRKMVDP 225
++W+ G C++ +Q V CV + P G L+A+G + ++ +
Sbjct: 712 RIWN--VIDGNCLNVLQ--GHTEGVHCVRYSPDGQ-LLASGSFGGSIRLWSGQLHTNAYQ 766
Query: 226 VLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
V GH V + F D L + DG L+LWNV D + I GH ++ L++
Sbjct: 767 SKVLHGHTNWVWSMAFSPDGGILASGSDDGTLRLWNVQDGQCINVLSGHTDDV----LAI 822
Query: 285 WRHGGLLGCGSETNQVFVYDV 305
G L+ S+ V ++++
Sbjct: 823 AIRGQLMVSASQDQTVRLWNL 843
Score = 46.6 bits (109), Expect = 0.017, Method: Composition-based stats.
Identities = 67/317 (21%), Positives = 127/317 (40%), Gaps = 47/317 (14%)
Query: 10 PQAETTNERARCE----WDFNLRTTVSSSSSPN----------AAVSDSIGVIEFDPSDS 55
P +T R + E W +SS P+ A ++ + F P
Sbjct: 865 PNGKTLASRGQDETIHLWHLQFDGDLSSPLRPDKTWQRVTDTTAGLTSWTSYLSFSPDSQ 924
Query: 56 VFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLG 115
AT G I I+N++ ++ + A + ++ + P SG+ L
Sbjct: 925 TVATNGQDGSILIWNLQ--------------TESLSQWSGHDAPVWTVMFNP--SGKTLA 968
Query: 116 SGDYDGVVMEYDLEKK--VPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
SG +D V +D++ + + + G R ++ + L ASGS D T+++W+ +
Sbjct: 969 SGSHDQTVRLWDVQTHQCLQVLRGHQDGVR---AIAFGTDGQRL-ASGSSDQTIRLWEVQ 1024
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
G C+ +Q V + F L+ +G D+ +D++ + + + GH
Sbjct: 1025 T--GACLGVLQ--GHSGGVFTLAFTAHDQQLI-SGSFDQTIRLWDLQTR-ESIQILRGHT 1078
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV-GLSVWRHGGLL 291
+ I D TL + D ++LWN+ ++ H R++V +S +G L
Sbjct: 1079 GGIWTIAISPDGKTLASGSGDQTVRLWNLQTGHCLQVLHEH---RSWVTSVSFSSNGQFL 1135
Query: 292 GCGSETNQVFVYDVRWG 308
GS+ + V+D+ G
Sbjct: 1136 LSGSDDRTIKVWDIGTG 1152
Score = 46.6 bits (109), Expect = 0.019, Method: Composition-based stats.
Identities = 59/272 (21%), Positives = 121/272 (44%), Gaps = 40/272 (14%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVV 84
+NL+T S S + A + + F+PS A+G + +R++++++ H + V+
Sbjct: 938 WNLQTESLSQWSGHDA---PVWTVMFNPSGKTLASGSHDQTVRLWDVQT----HQCLQVL 990
Query: 85 ----DHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEH 140
D + + GT G+ L SG D + ++++ + H
Sbjct: 991 RGHQDGVRAIAF---------------GTDGQRLASGSSDQTIRLWEVQTGACLGVLQGH 1035
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQP-SASRSAVCCVEFHP 199
G V+++ ++ D L SGS D T+++WD + ++Q + + P
Sbjct: 1036 SGG-VFTLAFTAHDQQL-ISGSFDQTIRLWDLQTR-----ESIQILRGHTGGIWTIAISP 1088
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDG-CLKL 258
G +L A+G D+ ++++ + V HR VT + F + +G+D +K+
Sbjct: 1089 DGKTL-ASGSGDQTVRLWNLQTG-HCLQVLHEHRSWVTSVSFSSNGQFLLSGSDDRTIKV 1146
Query: 259 WNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGL 290
W++ R I+T + +R + G+++ R GL
Sbjct: 1147 WDIGTGRCIKTL---IVDRLYEGMNIQRAKGL 1175
Score = 44.7 bits (104), Expect = 0.077, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 23/214 (10%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VW+V ++ L ASGS D T+++WD + +C+ ++ + V + F G L
Sbjct: 955 VWTVMFNPSGKTL-ASGSHDQTVRLWDVQTH--QCLQVLR--GHQDGVRAIAFGTDGQRL 1009
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVND 263
A+G +D+ ++V+ + V GH V + F D + +G+ D ++LW++
Sbjct: 1010 -ASGSSDQTIRLWEVQTGA-CLGVLQGHSGGVFTLAFTAHDQQLISGSFDQTIRLWDLQT 1067
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV-HDFEPVTAA 322
I+ +GH + +S G L GS V +++++ G + V H+
Sbjct: 1068 RESIQILRGHTGGIWTIAIS--PDGKTLASGSGDQTVRLWNLQTGHCLQVLHE------- 1118
Query: 323 GSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R +V+SV + G+ L++G D + V+
Sbjct: 1119 --HRSWVTSVSFSSNGQ---FLLSGSDDRTIKVW 1147
>gi|409040599|gb|EKM50086.1| hypothetical protein PHACADRAFT_264609 [Phanerochaete carnosa
HHB-10118-sp]
Length = 357
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 132/313 (42%), Gaps = 31/313 (9%)
Query: 10 PQAETTNERARCEWDFNLRTTVSSSSSPNAAV-------SDSIGVIEFDPSDSVFATGGI 62
PQ E T SS + P+ + + SI ++F P ++ A+
Sbjct: 25 PQVPENKEPPAPAPPQPPPPTSSSRAKPHYELKHTMRGHTSSISAVKFSPDGTLLASCSN 84
Query: 63 ARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGV 122
R ++I+ S + + H+K LS + W + V S D+
Sbjct: 85 DRVVKIW---SPFTGELIRNLNGHTK----------GLSDIAWSSDSVYLVSASDDH--T 129
Query: 123 VMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVST 182
V +D++ + H V+ V+Y+ +L SG DG +++W+P+ GKC+ T
Sbjct: 130 VRIWDVDSGLTTRVLKGHTSY-VFCVNYNLTSTLL-VSGGCDGDVRIWNPQ--KGKCIKT 185
Query: 183 VQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL 242
+ A V V F+ + L+ + D +D + +GH +++F
Sbjct: 186 IH--AHLDYVTAVHFNR-DAGLIVSCALDGLIRIWDTNSGQCLKTLAEGHDAICQHVQFS 242
Query: 243 -DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG-LLGCGSETNQV 300
+ +++ D ++LW+ N SR ++TY GH N + + G + GSE N+V
Sbjct: 243 PNSKYILSTAHDSAIRLWDYNTSRCLKTYTGHANLKYCIAACFSVTGSKWIVSGSEDNKV 302
Query: 301 FVYDVRWGEPVWV 313
+++D++ E V V
Sbjct: 303 YLWDLQSREIVQV 315
>gi|158336956|ref|YP_001518131.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
gi|158307197|gb|ABW28814.1| WD-repeat protein [Acaryochloris marina MBIC11017]
Length = 1207
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 137 RDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVE 196
+ HG RV SV +S L ASGSDDGT+++WD + C+ T + +S V V
Sbjct: 743 KGHHG--RVRSVAFSHDGDYL-ASGSDDGTVKLWDFQT--ALCLQTYE--GHQSGVYSVA 795
Query: 197 FHPFGSSLVAAGCADKKAYAYDVRKMVDPVL-VFDGHRKTVTYIRF-LDVDTLVTAGTDG 254
F P + ++A+G AD+ +D + D L GH + + F D TL D
Sbjct: 796 FSP-KAPILASGSADQTVKLWDCQ--ADQCLRTLQGHTNQIFSLAFHSDGQTLACVTLDQ 852
Query: 255 CLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH--GGLLGCGSETNQVFVYDVRWGEPVW 312
++LWN ++ +RT++GH + L V H G L+ GS + + ++D W +
Sbjct: 853 TVRLWNWQTTQCLRTWQGHTD----WALPVVFHPQGQLIASGSGDSVINLWD--WQQQTA 906
Query: 313 VHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ R V S+ + +D L++GG+D + ++
Sbjct: 907 ILKLR------DHRAVVRSLAF---SDDGRYLISGGTDQTVRIW 941
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 63/243 (25%), Positives = 99/243 (40%), Gaps = 52/243 (21%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPI--FERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
G L SG DG V +D + + + +E + G V+SV +S P+L ASGS D T++
Sbjct: 758 GDYLASGSDDGTVKLWDFQTALCLQTYEGHQSG---VYSVAFSPKAPIL-ASGSADQTVK 813
Query: 169 MWDPRCDGGKCVSTVQPSASR----------SAVCCVE---------------------- 196
+WD C +C+ T+Q ++ + CV
Sbjct: 814 LWD--CQADQCLRTLQGHTNQIFSLAFHSDGQTLACVTLDQTVRLWNWQTTQCLRTWQGH 871
Query: 197 --------FHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-L 247
FHP G L+A+G D +D ++ +L HR V + F D L
Sbjct: 872 TDWALPVVFHPQGQ-LIASGSGDSVINLWDWQQQT-AILKLRDHRAVVRSLAFSDDGRYL 929
Query: 248 VTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL-SVWRHGGLLGCGSETNQVFVYDVR 306
++ GTD +++WN R +T+ H + V L SV G G V ++ V
Sbjct: 930 ISGGTDQTVRIWNWQTGRCEKTFYDHPDWVFAVALASVSGQAGWFASGGGDPDVRLWSVE 989
Query: 307 WGE 309
G+
Sbjct: 990 TGQ 992
Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats.
Identities = 75/318 (23%), Positives = 128/318 (40%), Gaps = 45/318 (14%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
FH Q A + + WD+ +T + A V + F +GG
Sbjct: 880 FHPQGQLIASGSGDSVINLWDWQQQTAILKLRDHRAVVRS----LAFSDDGRYLISGGTD 935
Query: 64 RKIRIYNIKS-----VLVDHP--VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
+ +RI+N ++ DHP V AV L+S+ + G G
Sbjct: 936 QTVRIWNWQTGRCEKTFYDHPDWVFAVA---------------LASVSGQAGWFAS--GG 978
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDG 176
GD D V + +E H + VWSV +S D ASGS D T+++WD +
Sbjct: 979 GDPD--VRLWSVETGQCQHVLKGHSDQ-VWSVAFSP-DHRSVASGSTDQTVRLWDVQT-- 1032
Query: 177 GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTV 236
G+C+ ++ R + + +HP G ++A+G D + V + + H+ +
Sbjct: 1033 GECLQVLKGHCDR--IYSIAYHPDGQ-ILASGSQDHTVKLWHV-DTGECLQTLTDHKSWI 1088
Query: 237 TYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLL 291
+ F + L + D +KLW+V + ++T GH V S +G L
Sbjct: 1089 FAVAFSPSNASQPSILASGSHDHTIKLWDVQTGKCLKTLCGHTQLVCSVAFS--PNGQYL 1146
Query: 292 GCGSETNQVFVYDVRWGE 309
GS+ V V++++ G+
Sbjct: 1147 VSGSQDQSVRVWEIQTGD 1164
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQ-----------PSASRSAVC 193
V+SV ++ D L ASGS DGT ++W R G+C+ T + P S SA
Sbjct: 658 VFSVAFNH-DGTLLASGSGDGTAKLW--RTHSGQCLQTCEGHQGWIRAVAMPPQSSSA-- 712
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGT 252
HP + +V + D+ +D+ + GH V + F D D L +
Sbjct: 713 ----HPPPAVMVTSS-EDQTIKIWDLTTG-KCLQTGKGHHGRVRSVAFSHDGDYLASGSD 766
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
DG +KLW+ + ++TY+GH + V S +L GS V ++D +
Sbjct: 767 DGTVKLWDFQTALCLQTYEGHQSGVYSVAFS--PKAPILASGSADQTVKLWDCQ 818
>gi|242096568|ref|XP_002438774.1| hypothetical protein SORBIDRAFT_10g025990 [Sorghum bicolor]
gi|241916997|gb|EER90141.1| hypothetical protein SORBIDRAFT_10g025990 [Sorghum bicolor]
Length = 343
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 29/269 (10%)
Query: 44 SIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSL 103
+I ++F+P+ +V A+G + I ++ + H + ++ + K + L
Sbjct: 55 AIYCMKFNPAGTVIASGSHDKDIFLWYV--------------HGECKNFMVLRGHKNAIL 100
Query: 104 KWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSD 163
+ T G + S D V +D+E + + EH V S ++ P L SGSD
Sbjct: 101 DLQWTTDGTQIISASPDKTVRVWDVETGKQVKKMAEHSSF-VNSCCPARKWPPLVVSGSD 159
Query: 164 DGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMV 223
DGT ++WD R G +Q + + V F + G D +D+RK
Sbjct: 160 DGTAKLWDLRQRGA-----IQTLPDKYQITAVSFSEAADKVFTGGL-DNDVKWWDLRKN- 212
Query: 224 DPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN----DSRVIRTYKGHVNN-- 276
+ GH+ +T ++ D L+T D LK+W++ ++R I+T GH +N
Sbjct: 213 EVTEYLKGHQDMITGMQLSPDGSYLLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFE 272
Query: 277 RNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
+N + S + GS V+++D
Sbjct: 273 KNLLKCSWSPDNRKVTAGSADRMVYIWDT 301
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDV 244
+ +SA+ C++F+P G +++A+G DK + + V +V GH+ + +++ D
Sbjct: 50 TGHQSAIYCMKFNPAG-TVIASGSHDKDIFLWYVHGECKNFMVLRGHKNAILDLQWTTDG 108
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+++A D +++W+V + ++ H
Sbjct: 109 TQIISASPDKTVRVWDVETGKQVKKMAEH 137
>gi|350413006|ref|XP_003489846.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp4-like [Bombus
impatiens]
Length = 525
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
P ++S L + P SGR LG+ YD +DLE++ + ++ H R V + + +GD
Sbjct: 324 PHRVSRLAFHP--SGRFLGTCCYDASWRLWDLEQQAEVLHQEGH-ARAVHCISF-QGDGS 379
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ A+G D ++WD R G+C+ ++ ++ ++F P G +A D +
Sbjct: 380 VSATGGHDSFGRVWDLRT--GRCIMFME--GHLKSIFGIDFSPNGFH-IATASEDNTSKI 434
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+D+RK V H ++ +++ ++ LVTA D K+W+ + ++T GH
Sbjct: 435 WDLRKR-SCVYTIPAHTNLLSDVKYQRIEGQYLVTASYDNTAKIWSNKTWQPLKTLPGH 492
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-----VCCVEFHPFGSSLVAA 207
G + AS + DGT+++W GG S +P A V + FHP G +
Sbjct: 290 GQTCVLASCASDGTVKLWS----GG---SGEEPLAEVEGHEPHRVSRLAFHPSGR-FLGT 341
Query: 208 GCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRV 266
C D +D+ + + VL +GH + V I F D T G D ++W++ R
Sbjct: 342 CCYDASWRLWDLEQQAE-VLHQEGHARAVHCISFQGDGSVSATGGHDSFGRVWDLRTGRC 400
Query: 267 IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
I +GH+ ++ G+ +G + SE N ++D+R
Sbjct: 401 IMFMEGHL--KSIFGIDFSPNGFHIATASEDNTSKIWDLR 438
>gi|340708706|ref|XP_003392963.1| PREDICTED: u4/U6 small nuclear ribonucleoprotein Prp4-like [Bombus
terrestris]
Length = 525
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
P ++S L + P SGR LG+ YD +DLE++ + ++ H R V + + +GD
Sbjct: 324 PHRVSRLAFHP--SGRFLGTCCYDASWRLWDLEQQAEVLHQEGH-ARAVHCISF-QGDGS 379
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ A+G D ++WD R G+C+ ++ ++ ++F P G +A D +
Sbjct: 380 VSATGGHDSFGRVWDLRT--GRCIMFME--GHLKSIFGIDFSPNGFH-IATASEDNTSKI 434
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVD--TLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+D+RK V H ++ +++ ++ LVTA D K+W+ + ++T GH
Sbjct: 435 WDLRKR-SCVYTIPAHTNLLSDVKYQRIEGQYLVTASYDNTAKIWSNKTWQPLKTLPGH 492
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA-----VCCVEFHPFGSSLVAA 207
G + AS + DGT+++W GG S +P A V + FHP G +
Sbjct: 290 GQTCVLASCASDGTVKLWS----GG---SGEEPLAEVEGHEPHRVSRLAFHPSGR-FLGT 341
Query: 208 GCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRV 266
C D +D+ + + VL +GH + V I F D T G D ++W++ R
Sbjct: 342 CCYDASWRLWDLEQQAE-VLHQEGHARAVHCISFQGDGSVSATGGHDSFGRVWDLRTGRC 400
Query: 267 IRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
I +GH+ ++ G+ +G + SE N ++D+R
Sbjct: 401 IMFMEGHL--KSIFGIDFSPNGFHIATASEDNTSKIWDLR 438
>gi|427735203|ref|YP_007054747.1| WD40 repeat-containing protein [Rivularia sp. PCC 7116]
gi|427370244|gb|AFY54200.1| WD40 repeat-containing protein [Rivularia sp. PCC 7116]
Length = 1171
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTM 167
++ R+L S D V +D+ + H ++SVD S +GD L ASGS D T+
Sbjct: 733 SNDRILASSSEDRTVKLWDINTGECLKTLQGHFNE-IYSVDISPQGD--LLASGSHDQTI 789
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD G+C+ T+Q S+V + F+ G+ LV+ G D+ A + V K +
Sbjct: 790 KLWD--ISTGECLKTLQ--GHSSSVYSIAFNRQGNLLVS-GSYDQTAKLWSVGKN-QCLR 843
Query: 228 VFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
G+ V + F D TL + D ++LW+V+ S+ ++T++GH V S
Sbjct: 844 TLRGYTNQVFSVAFSPDGQTLASGSQDSSVRLWDVSTSQSLQTFQGHCAAIWSVAFS--P 901
Query: 287 HGGLLGCGSETNQVFVYDV 305
G L SE + ++DV
Sbjct: 902 DGQTLASSSEDRTIRLWDV 920
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L SG D V +D+ + H +WSV +S L AS S+D T+++W
Sbjct: 861 GQTLASGSQDSSVRLWDVSTSQSLQTFQGHCAA-IWSVAFSPDGQTL-ASSSEDRTIRLW 918
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D + Q R+ VC V F P G +L A+ D+ +D+ K + +
Sbjct: 919 D--VANRNFLKVFQ--GHRALVCSVAFSPDGQTL-ASSSEDQTIRLWDI-KTGQVLKILQ 972
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GHR V I F D TL + D +KLW+++ + +T GH
Sbjct: 973 GHRAAVWSIAFSPDGQTLASGSYDQTIKLWDISSGQCKKTLLGH 1016
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G +L SG YD + + K + R G +V+SV +S L ASGS D ++++
Sbjct: 819 GNLLVSGSYDQTAKLWSVGKNQCL--RTLRGYTNQVFSVAFSPDGQTL-ASGSQDSSVRL 875
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + + T Q + A+ V F P G +L A+ D+ +DV + + VF
Sbjct: 876 WD--VSTSQSLQTFQGHCA--AIWSVAFSPDGQTL-ASSSEDRTIRLWDVANR-NFLKVF 929
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR-- 286
GHR V + F D TL ++ D ++LW++ +V++ +GH +VW
Sbjct: 930 QGHRALVCSVAFSPDGQTLASSSEDQTIRLWDIKTGQVLKILQGH-------RAAVWSIA 982
Query: 287 ---HGGLLGCGSETNQVFVYDVRWGE 309
G L GS + ++D+ G+
Sbjct: 983 FSPDGQTLASGSYDQTIKLWDISSGQ 1008
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 20/192 (10%)
Query: 129 EKKVPIFERDEHGGRRV--------W--SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGK 178
+ K I+ R+ GR+V W S+ +S +L ASGS D T+++WD + G+
Sbjct: 574 DTKGNIYLREVVNGRQVILCRGHTSWVISLAFSPDGRIL-ASGSGDYTLKLWD--VETGQ 630
Query: 179 CVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTY 238
C+ T+ + + V V F P GSS+ +A +D + + + F GH V
Sbjct: 631 CLQTL--AGHDNEVWSVAFSPDGSSISSA--SDDQTVKLWSISTGECLKTFQGHASWVHS 686
Query: 239 IRFLDVDTLVTAGTDG-CLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSET 297
+ F ++ +G+D +KLW+++ ++T +GH + +++ + +L SE
Sbjct: 687 VAFSSNGQMIASGSDDQTVKLWDISTGECLKTLQGHQD--GIRAIAICSNDRILASSSED 744
Query: 298 NQVFVYDVRWGE 309
V ++D+ GE
Sbjct: 745 RTVKLWDINTGE 756
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 38/275 (13%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
F Q A ++ +R WD R + A V + F P A+
Sbjct: 899 FSPDGQTLASSSEDRTIRLWDVANRNFLKVFQGHRALVCS----VAFSPDGQTLASSSED 954
Query: 64 RKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVV 123
+ IR+++IK+ V+ ++ + A + S+ + P G+ L SG YD +
Sbjct: 955 QTIRLWDIKT----GQVLKILQGHR---------AAVWSIAFSP--DGQTLASGSYDQTI 999
Query: 124 MEYDLE----KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKC 179
+D+ KK + R VWSV +S D L AS S DGT+++W + + +C
Sbjct: 1000 KLWDISSGQCKKTLLGHR-----AWVWSVAFSP-DGKLLASTSPDGTIRLWSIKAN--EC 1051
Query: 180 VSTVQPSASRSAVCCVEFHPFGSSLVAAGC-ADKKAYAYDVRKMVDPVLVFDGHRKTVTY 238
+ +Q + + + + F P + + AGC D +DV + GH V
Sbjct: 1052 LKVLQ--VNTAWLQLITFSP--DNQILAGCNQDFTVELWDVNTG-QYLKSLQGHTGRVWS 1106
Query: 239 IRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKG 272
I F TLV++ D ++LW++ +T K
Sbjct: 1107 IAFNPKSQTLVSSSEDETIRLWDIRTGDCFKTMKA 1141
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 48/202 (23%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQ--PSASRSAVCC-------- 194
V SV +S ++ ASGSDD T+++WD G+C+ T+Q R+ C
Sbjct: 684 VHSVAFSSNGQMI-ASGSDDQTVKLWD--ISTGECLKTLQGHQDGIRAIAICSNDRILAS 740
Query: 195 ------------------------------VEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
V+ P G L+A+G D+ +D+ +
Sbjct: 741 SSEDRTVKLWDINTGECLKTLQGHFNEIYSVDISPQG-DLLASGSHDQTIKLWDI-STGE 798
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
+ GH +V I F L+ +G+ D KLW+V ++ +RT +G+ N V S
Sbjct: 799 CLKTLQGHSSSVYSIAFNRQGNLLVSGSYDQTAKLWSVGKNQCLRTLRGYTNQVFSVAFS 858
Query: 284 VWRHGGLLGCGSETNQVFVYDV 305
G L GS+ + V ++DV
Sbjct: 859 --PDGQTLASGSQDSSVRLWDV 878
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 40/293 (13%)
Query: 23 WDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVA 82
WD + ++ + AA I + F P A+ R IR++++ + +
Sbjct: 876 WDVSTSQSLQTFQGHCAA----IWSVAFSPDGQTLASSSEDRTIRLWDV----ANRNFLK 927
Query: 83 VVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGG 142
V + A + S+ + P G+ L S D + +D+ K + + +
Sbjct: 928 VFQGHR---------ALVCSVAFSP--DGQTLASSSEDQTIRLWDI-KTGQVLKILQGHR 975
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGS 202
VWS+ +S L ASGS D T+++WD G+C T+ R+ V V F P G
Sbjct: 976 AAVWSIAFSPDGQTL-ASGSYDQTIKLWD--ISSGQCKKTLL--GHRAWVWSVAFSPDGK 1030
Query: 203 SLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
L+A+ D + + K + + V + + I F D L D ++LW+V
Sbjct: 1031 -LLASTSPDGTIRLWSI-KANECLKVLQVNTAWLQLITFSPDNQILAGCNQDFTVELWDV 1088
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWR-----HGGLLGCGSETNQVFVYDVRWGE 309
N + +++ +GH VW L SE + ++D+R G+
Sbjct: 1089 NTGQYLKSLQGHTGR-------VWSIAFNPKSQTLVSSSEDETIRLWDIRTGD 1134
>gi|393241667|gb|EJD49188.1| HET-E [Auricularia delicata TFB-10046 SS5]
Length = 308
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 36/305 (11%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKS-VLVDHPVVAVVD 85
L + SS +D+I + + P + +G + +RI++ ++ V+V P++ +
Sbjct: 6 LTPLIQSSGRQLGGTADAIISVAYLPQGNSIISGHLDGSLRIWDAETGVIVVGPLLGHL- 64
Query: 86 HSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRV 145
+C A GR L S D + +D E PI + RV
Sbjct: 65 ------IAVCCVAV--------SPDGRHLCSASSDCTIRRWDAESGAPIGKPMTGHVARV 110
Query: 146 WSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
SV YS D SG+DD T+Q+WD G+ + V S V CV F P S+ +
Sbjct: 111 NSVAYSP-DGTRIVSGADDRTVQLWDAST--GEALG-VLLEGHTSTVLCVAFSP-DSACI 165
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDS 264
A+G D +D + GH V + F D LV+ D +++WNV
Sbjct: 166 ASGLWDNTIRVWDSASGAH-LSTLKGHTSGVASLCFSPDRIHLVSGYGDRTVRIWNVATR 224
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV---------WVHD 315
++ T +GH N V +S G + GS + ++D + G+ V WVH
Sbjct: 225 QLELTLQGHSNFVTSVAIS--PSGSSIASGSYDKTIRIWDAQTGDAVGAPLTGHINWVHS 282
Query: 316 --FEP 318
F P
Sbjct: 283 VAFSP 287
>gi|451847909|gb|EMD61216.1| hypothetical protein COCSADRAFT_39896 [Cochliobolus sativus ND90Pr]
Length = 982
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 22/244 (9%)
Query: 114 LGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
L S +D V +D V + + H V SV +S D AS S+D T+++WD
Sbjct: 667 LASASWDNTVKIWDTHSGVCLQTLEGHRSS-VNSVVFSH-DSARLASASNDNTIKIWDTH 724
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
G+C+ T++ RS+V V F P + L +A +D +D+ V + +GHR
Sbjct: 725 --SGECLQTLE--GHRSSVNSVAFSPDSARLTSAS-SDNTVKIWDMHSGV-CLQTLEGHR 778
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
+V + F D L +A D +K+W+++ ++T +GH ++ N V S L
Sbjct: 779 SSVNSVAFSPDSARLASASYDKTVKIWDMHSGVCLQTLEGHHSSVNSVAFS--PDSARLA 836
Query: 293 CGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGL 352
S N V ++D H + RG+V SV + D L SD
Sbjct: 837 SASFDNTVKIWD--------THSGVCLQTLKGHRGWVHSVAF---SPDSARLTLASSDNT 885
Query: 353 LHVF 356
+ ++
Sbjct: 886 IKIW 889
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 179 CVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTY 238
C+ T++ R +V V F S+ +A+ D +D V + +GHR +V
Sbjct: 644 CLQTLE--GHRDSVRSVVF-SHDSARLASASWDNTVKIWDTHSGV-CLQTLEGHRSSVNS 699
Query: 239 IRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSET 297
+ F D L +A D +K+W+ + ++T +GH ++ N V S L S
Sbjct: 700 VVFSHDSARLASASNDNTIKIWDTHSGECLQTLEGHRSSVNSVAFS--PDSARLTSASSD 757
Query: 298 NQVFVYDVRWG 308
N V ++D+ G
Sbjct: 758 NTVKIWDMHSG 768
>gi|440685331|ref|YP_007160123.1| (Myosin heavy-chain) kinase [Anabaena cylindrica PCC 7122]
gi|428682591|gb|AFZ61353.1| (Myosin heavy-chain) kinase [Anabaena cylindrica PCC 7122]
Length = 1219
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 80/348 (22%), Positives = 144/348 (41%), Gaps = 59/348 (16%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
I ++ F P A+G IR+++++S D P + H Y+I L
Sbjct: 644 IWIVAFSPDGKKIASGCDDNIIRVWDLESG-KDEPY-KLQGHQ----YWIW------GLA 691
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P + ++L SG +D + ++LE + H G V S+ +S +L ASGS D
Sbjct: 692 FSPDS--KILASGSFDKTIKLWNLENGDCTQTLESHQGWVV-SLAFSPNGQIL-ASGSFD 747
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W D ++ V + F P G ++A+G D++ +++ + +
Sbjct: 748 KTIKLWKFNNDYNNYEYWETLEGHKNGVRVITFSPDGE-ILASGGVDQEIRIWNLETL-E 805
Query: 225 PVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
V GH + + F D TL + D +++WNV + +R +KG++N V +S
Sbjct: 806 CVRTLTGHSAWIRSLSFHADNKTLASGSDDQTVRIWNVKTGQSLRVFKGYLNWIWSVAVS 865
Query: 284 VWRHGGLLGCGSETNQVFVYDVRWGEPV--------WV-----HDFEPVTAA-------- 322
R + GS + ++++ E V W+ H + P+ A+
Sbjct: 866 TDRKQ--IATGSFDKTIKIWNLNQEESVVTLNKHKQWIWCVAFHPYLPLLASCSDDQTII 923
Query: 323 --------------GSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
S+ G + SV W G L GG DG + +F
Sbjct: 924 IWNLNNHQCLLNKIASDFGGIWSVTWSSDGH---YLACGGQDGTVRIF 968
Score = 45.8 bits (107), Expect = 0.036, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 27/173 (15%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ + VI F P + A+GG+ ++IRI+N++++ V + HS A + S
Sbjct: 773 NGVRVITFSPDGEILASGGVDQEIRIWNLETL---ECVRTLTGHS----------AWIRS 819
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
L + + L SG D V ++++ + + +F+ + +WSV S D A+
Sbjct: 820 LSFH--ADNKTLASGSDDQTVRIWNVKTGQSLRVFKGYLNW---IWSVAVST-DRKQIAT 873
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKK 213
GS D T+++W+ + S V + + + CV FHP+ L A C+D +
Sbjct: 874 GSFDKTIKIWNLNQEE----SVVTLNKHKQWIWCVAFHPYLPLL--ASCSDDQ 920
Score = 40.8 bits (94), Expect = 1.1, Method: Composition-based stats.
Identities = 59/253 (23%), Positives = 94/253 (37%), Gaps = 74/253 (29%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVV--MEYDLEKKVPIFERDE-------HGGRRVWSVDYSK 152
S+ W + G L G DG V EY ++ + FE + H G VWSV +S
Sbjct: 946 SVTWS--SDGHYLACGGQDGTVRIFEYQVDDSISYFEINHEYILNPRHEGW-VWSVAFSP 1002
Query: 153 GDPVLGASGSDDGTMQMWDPRCDGGK---------------------------------- 178
+ +L AS S D + +W + +
Sbjct: 1003 DNEIL-ASASHDKKIILWRKNHENQRFELWQELLEESGISSVSFRPDSRNSSQIILASGH 1061
Query: 179 -----------CVSTVQPSASRSA---------VCCVEFHPFGSSLVAAGCADKKAYAYD 218
CV P S++ V V F+P ++A+G D K +D
Sbjct: 1062 EDCKIRLRTINCVDNAIPIESKTLTADQGHQGWVFTVAFNPQNYDILASGGGDCKVKLWD 1121
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + VL H+ V + F D + +V+A TDG K+WN+ + ++IR R
Sbjct: 1122 L--ATNSVLWTQQHQGWVKSVTFSDDGEWVVSASTDGTTKIWNI-EGKLIREL---FTPR 1175
Query: 278 NFVGLSVWRHGGL 290
+ GL++ GL
Sbjct: 1176 PYEGLNITNTQGL 1188
>gi|434399872|ref|YP_007133876.1| WD-40 repeat-containing protein [Stanieria cyanosphaera PCC 7437]
gi|428270969|gb|AFZ36910.1| WD-40 repeat-containing protein [Stanieria cyanosphaera PCC 7437]
Length = 1167
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 83/324 (25%), Positives = 136/324 (41%), Gaps = 44/324 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
SD + ++F P + + AT + I+++N + K+ ++ +++
Sbjct: 729 SDRVLNVKFSPDNQLIATSSGDKTIKLWN--------------RNGKLLRTFVGHGDEVN 774
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
++ + G+ L SG DG V + LE + I H GR VW V +S +L A+
Sbjct: 775 AVAFS--KEGQTLASGSEDGTVKLWTLEGML-IHTITGHQGR-VWGVSFSPDGQIL-ATS 829
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDDGT+++W + K ++ Q + V V P G ++A ADK +++
Sbjct: 830 SDDGTIKLWQWNFELTKILTGHQ-----NLVHTVSVRPQGD-VIATTSADKTIKLWNLAG 883
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
L D H D LVT G +KLW+ N + I T+KGH +
Sbjct: 884 KELKTLSGD-HSPIWGVAWSPDGQVLVTGCERGIIKLWDFNTKQNILTWKGHPH--KVAS 940
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWV--HDFEPVT-----------AAGSERGF 328
+S G + SE V +++++ E + HD E VT AAGSE
Sbjct: 941 ISFSPDGQKIATASEDGTVKLWNLQGHELATLKGHD-EKVTSVSWSPDGQIIAAGSENKT 999
Query: 329 VSSVCWRRVGEDECTLVAGGSDGL 352
+ W G++ TL S L
Sbjct: 1000 IK--FWNLAGQELATLTGHNSSVL 1021
Score = 44.7 bits (104), Expect = 0.079, Method: Composition-based stats.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 144 RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSS 203
R+WSV +S ++ AS S+D T+++W R DG K ++ + +A + F P G
Sbjct: 567 RIWSVAWSPDGQII-ASPSEDETVRLW--RRDG-KLLNIL--TAHHDKISGASFSPDGKF 620
Query: 204 LVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVN 262
L A D A + + L GH+ + + F D TL TA D +KLW +
Sbjct: 621 L-ATSSEDGTAKLWTRDGQLIKTLT--GHKGRLWGVAFSPDSKTLATASDDFTIKLWTLE 677
Query: 263 DSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQV 300
+ IRT GH N V S G L SE + V
Sbjct: 678 GTE-IRTLTGHTNEVRNVTFS--PDGKTLATASEDSTV 712
>gi|395832745|ref|XP_003789416.1| PREDICTED: POC1 centriolar protein homolog A [Otolemur garnettii]
Length = 406
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 39/291 (13%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIY--NIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
D++ + F PS + A+G + +RI+ N+K V + V + C+
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKG----ESTVFRAHTATVRSVHFCS---- 113
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP--VLG 158
G+ L + D + + ++ +F +H W V +K P L
Sbjct: 114 ---------DGQSLVTASDDKTIKVWSTHRQKFLFSLSQHIN---W-VRCAKFSPDGRLI 160
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
S SDD T+++WD + +C+ + V V+FHP G+ + AAG D +D
Sbjct: 161 VSASDDKTVKLWDK--NSRECIYSY--CEHGGFVTYVDFHPSGTCIAAAG-MDNTVKVWD 215
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
VR + + H V + F + L+TA +D LK+ ++ + R++ T GH
Sbjct: 216 VRTH-RLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPA 274
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFV----YDVRWGEPVWVHDFEPVTAAGS 324
V S R G G QV V +D+ +GE + V P T A S
Sbjct: 275 TTVAFS--RTGEYFASGGSDEQVMVWKSNFDIDYGEVLKVQR-PPATLASS 322
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 133 PIFERDEHGGR-RVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSA 191
P ER G R V VD+S L ASGS D + +W + + + + A
Sbjct: 9 PSLERHFKGHRDAVTCVDFSLNKKQL-ASGSMDSCLMVWHMKPQS----RAYRFTGHKDA 63
Query: 192 VCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTA 250
V CV F P G L+A+G DK + V + VF H TV + F D +LVTA
Sbjct: 64 VTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTA 121
Query: 251 GTDGCLKLWNVNDSRVIRTYKGHVN 275
D +K+W+ + + + + H+N
Sbjct: 122 SDDKTIKVWSTHRQKFLFSLSQHIN 146
>gi|425449150|ref|ZP_18828993.1| Genome sequencing data, contig C309 (fragment) [Microcystis
aeruginosa PCC 7941]
gi|389764351|emb|CCI09334.1| Genome sequencing data, contig C309 (fragment) [Microcystis
aeruginosa PCC 7941]
Length = 277
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G+ L +G D + +D+E I H S G ++ SGSDDGT+++W
Sbjct: 49 GKTLATGSSDNTIKLWDVETGQQIRTLTGHNSYVSSVSFSSDGKTLV--SGSDDGTIKLW 106
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
+ G+ + T+ S +V F G +L A G D ++V + + +
Sbjct: 107 NVET--GQEIRTL--SGHNYSVNSASFSNDGKTL-ATGSRDDTIKLWNV-ETGEEIRTLS 160
Query: 231 GHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F D TL T D +KLWNV IRT GH + N V S G
Sbjct: 161 GHNGYVNSVSFSPDGKTLATGSWDSTIKLWNVETGEEIRTLSGHNYSVNSVSFS--PDGK 218
Query: 290 LLGCGSETNQVFVYDVRWG 308
L GS+ + +++ +G
Sbjct: 219 TLATGSDDGTIKLWNGEYG 237
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 20/199 (10%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
A+GS D T+++WD G+ + T+ + +V V F G +L A G +D +D
Sbjct: 11 ATGSSDNTIKLWDVET--GQEIRTL--TGHNESVYSVSFSSDGKTL-ATGSSDNTIKLWD 65
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
V + + GH V+ + F D TLV+ DG +KLWNV + IRT GH +
Sbjct: 66 V-ETGQQIRTLTGHNSYVSSVSFSSDGKTLVSGSDDGTIKLWNVETGQEIRTLSGHNYSV 124
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRV 337
N S G L GS + + +++V GE E T +G G+V+SV +
Sbjct: 125 NSASFS--NDGKTLATGSRDDTIKLWNVETGE-------EIRTLSG-HNGYVNSVSFSPD 174
Query: 338 GEDECTLVAGGSDGLLHVF 356
G+ TL G D + ++
Sbjct: 175 GK---TLATGSWDSTIKLW 190
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 243 DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFV 302
D TL T +D +KLW+V + IRT GH N + +S G L GS N + +
Sbjct: 6 DGKTLATGSSDNTIKLWDVETGQEIRTLTGH--NESVYSVSFSSDGKTLATGSSDNTIKL 63
Query: 303 YDVRWGEPV 311
+DV G+ +
Sbjct: 64 WDVETGQQI 72
>gi|320031360|gb|EFW13330.1| WD repeat protein [Coccidioides posadasii str. Silveira]
Length = 515
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGT 166
P +S R + +G D +D + PI H V +V +S D +L A+GS D T
Sbjct: 155 PASSSR-MATGSGDSTARIWDCDTGTPIHTLKGHSSW-VLAVSWSPNDKIL-ATGSMDNT 211
Query: 167 MQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF-----GSSLVAAGCADKKAYAYDV-R 220
+++WDP+ G+ + ++ + + + P+ G +A+ D +DV
Sbjct: 212 VRLWDPKT--GQALGAPLKGHTK-WIMSLAWEPYHLQDPGRPRLASASKDSTVRIWDVVS 268
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
K ++ VL GH+ +V+ +R+ + T+ D +K+WN D +I+T H + N +
Sbjct: 269 KRIENVLT--GHKGSVSCVRWGGTARIYTSSHDKTIKIWNPKDGSLIQTLSSHTHRVNHL 326
Query: 281 GLSV 284
LS
Sbjct: 327 ALST 330
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+ + D + +D P+ GH+K V ++ F D + +A D +KLWN D
Sbjct: 374 LVSASDDFTMFLWDPASSNKPISRMLGHQKEVNHVTFSPDGAYIASASFDNHVKLWNARD 433
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
+ + + +GHV S LL S+ + V+DVR G+
Sbjct: 434 GKFMTSLRGHVGAVYQCCFSA--DSRLLVSSSKDTTLKVWDVRTGK 477
>gi|255076529|ref|XP_002501939.1| katanin p80 subunit-like protein [Micromonas sp. RCC299]
gi|226517203|gb|ACO63197.1| katanin p80 subunit-like protein [Micromonas sp. RCC299]
Length = 897
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
LK +SG ++ GD D V + + K PI H V V + + V+ +G+
Sbjct: 21 LKIGRKSSGVMVTGGD-DKKVNLWSIGKSSPILSLAGHQSA-VECVTFDNAEEVV-VAGA 77
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
GT+++WD + K V T+ + RS V V+FHPFG A+G D +D+R+
Sbjct: 78 AGGTLKLWD--LEEAKVVRTL--TGHRSNVISVDFHPFGE-FFASGSLDCNTKIWDIRRK 132
Query: 223 VDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+ + GH + V+ +F D +++ G DG +KLW++ R++R H
Sbjct: 133 -GCIHTYKGHDRGVSVAKFSPDGKWVLSGGQDGRVKLWDLTAGRLLRELPAH 183
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 186 SASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVD 245
+A +SAV C++ S ++ G DKK + + K P+L GH+ V + F + +
Sbjct: 12 NAHQSAVNCLKIGRKSSGVMVTGGDDKKVNLWSIGKS-SPILSLAGHQSAVECVTFDNAE 70
Query: 246 TLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
+V AG G LKLW++ +++V+RT GH N + + G GS ++D
Sbjct: 71 EVVVAGAAGGTLKLWDLEEAKVVRTLTGH--RSNVISVDFHPFGEFFASGSLDCNTKIWD 128
Query: 305 VR 306
+R
Sbjct: 129 IR 130
>gi|308458251|ref|XP_003091472.1| CRE-SWD-3.3 protein [Caenorhabditis remanei]
gi|308256664|gb|EFP00617.1| CRE-SWD-3.3 protein [Caenorhabditis remanei]
Length = 424
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 36/273 (13%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRI-----YNIKSVLVDHPVVAVVDHSKVCDYYICT 96
+ SI V++F P T ++I+I +N + L H +
Sbjct: 135 TKSISVVKFSPCGRYLGTASADKQIKIWETEKFNCERTLYGHKL---------------- 178
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
++ + W ++G L S D V + +E + + H V+S D++ +
Sbjct: 179 --GVNDISWT--SNGAFLASASDDTTVKLFSVETGICLRTMKGHTSY-VFSCDFNPQSSL 233
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
+ SG D T+++WD G+CV + A V V F+ G+ L+A+ +
Sbjct: 234 V-VSGGYDETIRVWD--VLNGQCVRML--PAHTDPVTSVAFNHMGN-LIASSSFEGCIRI 287
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDG-CLKLWNVNDSRVIRTYKGHVN 275
+D+ + D VTY F + +G G +K+W++ + ++ YKGHVN
Sbjct: 288 WDLSDGRCLQTLVDLDHAPVTYASFTPNGKYLVSGELGSTIKIWSLEKEKAVKKYKGHVN 347
Query: 276 NRN--FVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ F L+ + G + CGSE ++ V+DV+
Sbjct: 348 EKYCIFANLATTK-GQRIVCGSEDGRIIVWDVQ 379
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,448,868,767
Number of Sequences: 23463169
Number of extensions: 288191948
Number of successful extensions: 732630
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 18907
Number of HSP's that attempted gapping in prelim test: 647185
Number of HSP's gapped (non-prelim): 72146
length of query: 366
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 222
effective length of database: 8,980,499,031
effective search space: 1993670784882
effective search space used: 1993670784882
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)