BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017773
(366 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FFA7|RUP2_ARATH WD repeat-containing protein RUP2 OS=Arabidopsis thaliana GN=RUP2
PE=1 SV=1
Length = 368
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/371 (63%), Positives = 286/371 (77%), Gaps = 12/371 (3%)
Query: 1 MSNFHDHQQPQAETTNERA-RCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFAT 59
M+ H H+Q Q + + R EWD + + SS +++ SD IG IEFDP+D++ AT
Sbjct: 1 MNTLHPHKQQQEQAQQQEEARYEWDL---SLSTVVSSSSSSASDVIGAIEFDPTDNIVAT 57
Query: 60 GGIARKIRIYNIKSVLVDHPV----VAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLG 115
GI+RKIR Y + S+L ++ V V+ VD + C+YYICTPAKLSSL+W+PG+ GRV+G
Sbjct: 58 AGISRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIG 117
Query: 116 SGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSK--GDPVLGASGSDDGTMQMWDPR 173
SGDYDGVVMEYDLEK+ P+FERDEHGGRRVWSVDY++ G +GASGSDDGTMQ+WDPR
Sbjct: 118 SGDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPR 177
Query: 174 CDGGKCVSTVQPSA-SRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
C + V V+P+ RSAVCCVEF P G VA GCAD+K Y YD+RK+VDP L GH
Sbjct: 178 CPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGH 237
Query: 233 RKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
KTV+Y+RFLD T+VTAGTDGCLKLW+V D RVIRTY+GHVNNRNFVGLSVWR+G L G
Sbjct: 238 TKTVSYVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFG 297
Query: 293 CGSETNQVFVYDVRWGEPVWVHDFEPV-TAAGSERGFVSSVCWRRVGEDECTLVAGGSDG 351
CGSE N+VFVYD RWG+PVWV FEPV +GS++ FVSSVCWR+ G D+CTLVAGGSDG
Sbjct: 298 CGSENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDG 357
Query: 352 LLHVFVGKKKP 362
+L V+VGK+KP
Sbjct: 358 VLQVYVGKRKP 368
>sp|Q9LTJ6|RUP1_ARATH WD repeat-containing protein RUP1 OS=Arabidopsis thaliana GN=RUP1
PE=1 SV=1
Length = 385
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/353 (60%), Positives = 256/353 (72%), Gaps = 13/353 (3%)
Query: 10 PQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIY 69
P RC+WD +L VSS+S+ SD+IG IEFDP+ + ATGGIARKIR Y
Sbjct: 43 PTIMNIENIPRCDWDLSLSAVVSSASTG----SDAIGAIEFDPTGEIIATGGIARKIRSY 98
Query: 70 NIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLE 129
+ S+L DH + YICTPAKLSSLKW+P SGRV+GSGDYDGVV EYD+E
Sbjct: 99 RLSSLLESRD-----DHVTASESYICTPAKLSSLKWRPDFSGRVIGSGDYDGVVTEYDVE 153
Query: 130 KKVPIFERDEHGGRRVWSVDYS-KGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSAS 188
K+VP+ ERDEHGGRR+WSVDY+ ++GASGSDDGT+QMWDPR +GG TV+P
Sbjct: 154 KQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPR-NGGTLEETVRPGGG 212
Query: 189 RSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLV 248
+A+C VEF PFG S +A GCAD+ AY YD+R++VDP++V DGH KTVTY RF+D T+V
Sbjct: 213 -AAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHTIV 271
Query: 249 TAGTDGCLKLWNV-NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRW 307
T TDG LK W++ N RV+RTY+GHVN+RNFVGLSVWRHGGL+ GSE NQVFVYD RW
Sbjct: 272 TGSTDGSLKQWDIDNGRRVVRTYRGHVNSRNFVGLSVWRHGGLVVSGSENNQVFVYDKRW 331
Query: 308 GEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVFVGKK 360
EPVWV GS+R FVSSVC R+V ED CTLVAGGSDG L +F GK+
Sbjct: 332 EEPVWVCGLGHTNRFGSDRRFVSSVCLRQVDEDWCTLVAGGSDGALEIFSGKQ 384
>sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1
PE=1 SV=2
Length = 675
Score = 208 bits (529), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 183/320 (57%), Gaps = 28/320 (8%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPV---VAVVDHSKVCDYYICTPAKLS 101
+ IEFD D +FAT G++R I++++ SV V+ P +V+ S T +KLS
Sbjct: 374 VSSIEFDRDDELFATAGVSRCIKVFDFSSV-VNEPADMQCPIVEMS--------TRSKLS 424
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
L W + S DY+G+V +D+ + + E +EH +R WSVD+S+ +P + SG
Sbjct: 425 CLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEHE-KRAWSVDFSRTEPSMLVSG 482
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
SDD +++W R + +V ++ +CCV+++P S+ +A G AD + YD+R
Sbjct: 483 SDDCKVKVWCTRQEA-----SVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRN 537
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ P+ VF GH+K V+Y++FL + L +A TD L+LW+V D+ +RT++GH N +NFVG
Sbjct: 538 ISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVG 597
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF--EPVTAAGSERG--FVSSVCWRRV 337
L+V + L CGSETN+V+VY PV H F + A E G F+S+VCW+
Sbjct: 598 LTV--NSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEEEAGSYFISAVCWK-- 653
Query: 338 GEDECTLVAGGSDGLLHVFV 357
D T++ S G + V V
Sbjct: 654 -SDSPTMLTANSQGTIKVLV 672
>sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1
Length = 672
Score = 207 bits (527), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 183/317 (57%), Gaps = 22/317 (6%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ IEFD D +FAT G++R+I++++ S +V+ P A H V + + T +KLS L
Sbjct: 371 VSSIEFDRDDDLFATAGVSRRIKVFDF-SAVVNEPTDA---HCPVVE--MTTRSKLSCLS 424
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W ++ S DY+G+V + + + + E +EH +R WSVD+S+ DP + SGSDD
Sbjct: 425 WNKYAKNQI-ASSDYEGIVTVWTMTTRKSLMEYEEHE-KRAWSVDFSRTDPSMLVSGSDD 482
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
+++W C + ++V ++ +CCV+++P + +A G AD + YD+R +
Sbjct: 483 CKVKVW---CTNQE--ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISR 537
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
PV VF GH+K V+Y++FL D L +A TD L+LW+V + +RT++GH N +NFVGL+V
Sbjct: 538 PVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQNLPVRTFRGHANEKNFVGLTV 597
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERG----FVSSVCWRRVGED 340
+ CGSETN+VFVY +P+ H F + +E F+S+VCW+ D
Sbjct: 598 --RSEYIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAEDEAGSYFISAVCWK---SD 652
Query: 341 ECTLVAGGSDGLLHVFV 357
T++ S G + V V
Sbjct: 653 RPTILTANSQGTIKVLV 669
>sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1
Length = 794
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 182/331 (54%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICT 96
S+ + I FD FAT G+ +KI+I+ +S++ D +PVV + SK
Sbjct: 484 SNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSK-------- 535
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LS + W +V S +++GVV +D+ + + E EH +RVWS+DYS DP
Sbjct: 536 ---LSGICWNSYIKSQV-ASSNFEGVVQVWDVARNQLVTEMKEHE-KRVWSIDYSSADPT 590
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGSDDG++++W + G + T++ A+ +CCV+F +A G AD K Y
Sbjct: 591 LLASGSDDGSVKLWS--INQGVSIGTIKTKAN---ICCVQFPSETGRSLAFGSADHKVYY 645
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN------DSRVIRTY 270
YD+R P+ GH KTV+Y+RF+D TLV++ TD LKLW+++ + + ++
Sbjct: 646 YDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSF 705
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDF---EPVTAAGSERG 327
GH N +NFVGLSV G + GSETN+VFVY + PV + F +PV+ +
Sbjct: 706 MGHTNVKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDA 763
Query: 328 --FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SSVCWR G+ TLVA S G + +
Sbjct: 764 SQFISSVCWR--GQS-STLVAANSTGNIKIL 791
>sp|Q9LJR3|SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1
Length = 845
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 182/331 (54%), Gaps = 39/331 (11%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVD-----HPVVAVVDHSKVCDYYICT 96
S+ + + FD +FAT G+ +KI+I+ S++ D +PVV + SK
Sbjct: 534 SNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSK-------- 585
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
LSSL W ++ S ++DGVV +D+ + + E EH +RVWS+D S DP
Sbjct: 586 ---LSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEHK-KRVWSIDISSADPT 640
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L ASGSDDGT+++W + G + T++ A+ VCCV+F +A G AD K Y
Sbjct: 641 LLASGSDDGTVKLWS--INQGVSIGTIKTKAN---VCCVQFPSDSGRSLAFGSADHKVYY 695
Query: 217 YDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVN------DSRVIRTY 270
YD+R P+ GH KTV+Y++F+D TLV++ TD LKLW+++ + + ++
Sbjct: 696 YDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSF 755
Query: 271 KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPV-TAAGSE---- 325
GH N +NFVGLSV G + GSETN+VFVY + PV + F + +G E
Sbjct: 756 TGHTNLKNFVGLSV--SDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDA 813
Query: 326 RGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
F+SS+CWR G+ TLVA S+G + +
Sbjct: 814 SQFISSICWR--GQS-STLVAANSNGNIKIL 841
>sp|Q9R1A8|RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1
SV=2
Length = 733
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 423 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCN------SKIS 476
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 477 CISW-SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 532
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 533 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 587
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 588 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 647
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 648 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 705
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 706 CWRALSDGESNVLIAANSQGTIKVL 730
>sp|Q8NHY2|RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1
SV=1
Length = 731
Score = 191 bits (485), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 27/325 (8%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S + IEFD FA G+ +KI++Y +V+ D + ++ C+ +K+S
Sbjct: 421 SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCN------SKIS 474
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYD--LEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+ W +L S DY+G V+ +D ++ +++ E +R WSVD++ DP L A
Sbjct: 475 CISWS-SYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHE---KRCWSVDFNLMDPKLLA 530
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGSDD +++W D V++++ A+ VCCV+F P +A GCAD + YD+
Sbjct: 531 SGSDDAKVKLWSTNLDNS--VASIEAKAN---VCCVKFSPSSRYHLAFGCADHCVHYYDL 585
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
R P++VF GHRK V+Y +F+ + +V+A TD LKLWNV +R++KGH+N +NF
Sbjct: 586 RNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNF 645
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE-------RGFVSSV 332
VGL+ +G + CGSE N +++Y + + F+ V + + FVS+V
Sbjct: 646 VGLA--SNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 703
Query: 333 CWRRVGEDECT-LVAGGSDGLLHVF 356
CWR + + E L+A S G + V
Sbjct: 704 CWRALPDGESNVLIAANSQGTIKVL 728
>sp|Q9SYX2|SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1
SV=1
Length = 1029
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 173/328 (52%), Gaps = 42/328 (12%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNI-----KSVLVDHPVVAVVDHSKVCDYYICTPAKLSS 102
+ FDP + A GI++KI+I++ +SV V +P+V +V+ SK LS
Sbjct: 722 LSFDPDEEHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSK-----------LSC 770
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGS 162
+ W L S DYDGVV +D + EH +R WSVD+S DP SGS
Sbjct: 771 VCWNSYIKN-YLASTDYDGVVQIWDAGTGQGFSQYTEHQ-KRAWSVDFSPSDPTKFVSGS 828
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD ++++W + + + T+ A+ VCCV+F + + L+A G AD K Y YD+R +
Sbjct: 829 DDCSVKLWS--INEKRSLGTIWSPAN---VCCVQFSSYSNHLLAFGSADYKVYCYDLRYV 883
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSR--------VIRTYKGHV 274
P GH K V+Y++F+D +T+V+A TD LKLWN+N + TYKGH
Sbjct: 884 KTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHT 943
Query: 275 NNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA-AGSER-----GF 328
N +NFVGLSV G + CGSETN+V+ Y P+ + F V +G+E F
Sbjct: 944 NQKNFVGLSVL--DGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQF 1001
Query: 329 VSSVCWRRVGEDECTLVAGGSDGLLHVF 356
VSSVCWR+ LVA S G + +
Sbjct: 1002 VSSVCWRKKSN---MLVAANSTGNMKLL 1026
>sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2
Length = 1036
Score = 184 bits (468), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 181/351 (51%), Gaps = 44/351 (12%)
Query: 25 FNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVL-----VDHP 79
F R + +S N S+ I + FD + FAT G+++KI+IY S+ + +P
Sbjct: 708 FETRGVLRTSELNN--TSNVICSLGFDRDEDYFATAGVSKKIKIYEFNSLFNESVDIHYP 765
Query: 80 VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDE 139
+ + + SK LS + W L S DYDG+V +D+ I E
Sbjct: 766 AIEMPNRSK-----------LSGVCWNNYIRN-YLASSDYDGIVKLWDVTTGQAISHFIE 813
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H +R WSVD+S+ P ASGSDD ++++W+ + C+ T++ A+ VCCV+F P
Sbjct: 814 HE-KRAWSVDFSEACPTKLASGSDDCSVKLWN--INERNCLGTIRNIAN---VCCVQFSP 867
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLW 259
S L+A G +D + Y YD+R + P + GH K V+Y +FLD +TLVTA TD LKLW
Sbjct: 868 QSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLW 927
Query: 260 NVNDSR--------VIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
++ + T+ GH N +NFVGLS G + CGSETN+V+ Y P+
Sbjct: 928 DLKKTTHGGLSTNACSLTFGGHTNEKNFVGLST--SDGYIACGSETNEVYAYHRSLPMPI 985
Query: 312 WVHDF---EPVTAAGSERG---FVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
+ F +P++ E FVSSVCWR+ +V+ S+G + V
Sbjct: 986 TSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSN---MVVSASSNGSIKVL 1033
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 115/248 (46%), Gaps = 23/248 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGRV+ +G D V + + K+ I H V SV ++ + ++ A GS GTM++
Sbjct: 28 SGRVMVTGGEDKKVNLWAVGKQNCIISLSGHTSP-VDSVKFNSSEELVVA-GSQSGTMKI 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
+D + K V T+ + R+++ C++FHPFG VA+G D +DVR+ + +
Sbjct: 86 YD--LEPAKIVRTL--TGHRNSIRCMDFHPFGE-FVASGSTDTNVKLWDVRRK-GCIYTY 139
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V I+F D LVTA D +KLW++ ++ + +K H G+ +
Sbjct: 140 KGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTG--GVTGIEFHPNE 197
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS V +D + F+ V++ V S+ + G + +
Sbjct: 198 FLLASGSSDRTVQFWD--------LETFQLVSSTSPGASAVRSISFHPDG----SYLFCS 245
Query: 349 SDGLLHVF 356
S +LH F
Sbjct: 246 SQDMLHAF 253
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 29/189 (15%)
Query: 43 DSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDY-YICTPAKLS 101
+SI ++F P A+G +++++++ K C Y Y +++
Sbjct: 102 NSIRCMDFHPFGEFVASGSTDTNVKLWDVRR--------------KGCIYTYKGHSDQVN 147
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+K+ P G+ L + D + +DL E H G V +++ + +L ASG
Sbjct: 148 MIKFSP--DGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGG-VTGIEFHPNEFLL-ASG 203
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+Q WD + + VS+ P AS AV + FHP GS L + A+ +
Sbjct: 204 SSDRTVQFWD--LETFQLVSSTSPGAS--AVRSISFHPDGSYLFCSSQDMLHAFGW---- 255
Query: 222 MVDPVLVFD 230
+P+ FD
Sbjct: 256 --EPIRCFD 262
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 142/302 (47%), Gaps = 38/302 (12%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P ++ A+GG + +R+++I S + + + ++ + + +P
Sbjct: 1082 FSPDGAMLASGGDDQIVRLWDISS---GNCLYTLQGYTSWVRFLVFSP------------ 1126
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
+G L +G D +V +D+ K ++ H V +V +S L ASGS D T+++
Sbjct: 1127 NGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNW-VNAVAFSPDGATL-ASGSGDQTVRL 1184
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD KC+ +Q S V V F+P GS+L A+G +D+ +++ + F
Sbjct: 1185 WD--ISSSKCLYILQ--GHTSWVNSVVFNPDGSTL-ASGSSDQTVRLWEINSS-KCLCTF 1238
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH V + F D L + +D ++LW+++ S+ + T++GH N N V + G
Sbjct: 1239 QGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFN--PDG 1296
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
+L GS V ++++ +H F+ T+ +VSSV + G T++A G
Sbjct: 1297 SMLASGSGDQTVRLWEI--SSSKCLHTFQGHTS------WVSSVTFSPDG----TMLASG 1344
Query: 349 SD 350
SD
Sbjct: 1345 SD 1346
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 22/247 (8%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMW 170
G++ +GD G+V ++ + H V SV +S+ +L ASGSDD T+++W
Sbjct: 876 GKLFATGDSGGIVRFWEAATGKELLTCKGHNSW-VNSVGFSQDGKML-ASGSDDQTVRLW 933
Query: 171 DPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFD 230
D G+C+ T + SR V V F P S ++A+G +D+ +D+ + + +F
Sbjct: 934 D--ISSGQCLKTFKGHTSR--VRSVVFSP-NSLMLASGSSDQTVRLWDISSG-ECLYIFQ 987
Query: 231 GHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGG 289
GH V + F LD L T D ++LW+++ S+ ++GH + V S G
Sbjct: 988 GHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFS--SDGA 1045
Query: 290 LLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGS 349
+L GS+ V ++D+ G ++ + +G S V D L +GG
Sbjct: 1046 MLASGSDDQTVRLWDISSGNCLY-----------TLQGHTSCVRSVVFSPDGAMLASGGD 1094
Query: 350 DGLLHVF 356
D ++ ++
Sbjct: 1095 DQIVRLW 1101
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 30/270 (11%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F+P S+ A+G + +R+++I S SK + ++S+
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISS-------------SKCLHTFQGHTNWVNSVA 1291
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGS 162
+ P S GSGD + E K + F+ G W SV +S D + ASGS
Sbjct: 1292 FNPDGSMLASGSGDQTVRLWEISSSKCLHTFQ-----GHTSWVSSVTFSP-DGTMLASGS 1345
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
DD T+++W G+C+ T + V V F P G+ ++A+G D+ + +
Sbjct: 1346 DDQTVRLWS--ISSGECLYTFL--GHTNWVGSVIFSPDGA-ILASGSGDQTVRLWSISSG 1400
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGTD-GCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ GH V I F TL+ +G+D ++LWN++ + T GH+N+ V
Sbjct: 1401 -KCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVA 1459
Query: 282 LSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
S G +L GS+ + ++DV+ GE +
Sbjct: 1460 FS--SDGLILASGSDDETIKLWDVKTGECI 1487
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 44/310 (14%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F P + A+G + +R+++I S SK + ++S+
Sbjct: 1161 VNAVAFSPDGATLASGSGDQTVRLWDISS-------------SKCLYILQGHTSWVNSVV 1207
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW--SVDYSKGDPVLGASGS 162
+ P S GS D + E + K + F+ G W SV ++ +L ASGS
Sbjct: 1208 FNPDGSTLASGSSDQTVRLWEINSSKCLCTFQ-----GHTSWVNSVVFNPDGSML-ASGS 1261
Query: 163 DDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKM 222
D T+++WD KC+ T Q + V V F+P G S++A+G D+ +++
Sbjct: 1262 SDKTVRLWD--ISSSKCLHTFQ--GHTNWVNSVAFNPDG-SMLASGSGDQTVRLWEISSS 1316
Query: 223 VDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVG 281
+ F GH V+ + F T++ +G+ D ++LW+++ + T+ GH N+VG
Sbjct: 1317 -KCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHT---NWVG 1372
Query: 282 LSVWR-HGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGED 340
++ G +L GS V ++ + G+ ++ T G +V S+ + G
Sbjct: 1373 SVIFSPDGAILASGSGDQTVRLWSISSGKCLY-------TLQG-HNNWVGSIVFSPDG-- 1422
Query: 341 ECTLVAGGSD 350
TL+A GSD
Sbjct: 1423 --TLLASGSD 1430
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 30/259 (11%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F ++ A+G + +R+++I S + + + H+ + +P
Sbjct: 1040 FSSDGAMLASGSDDQTVRLWDISS---GNCLYTLQGHTSCVRSVVFSP------------ 1084
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP--VLGASGSDDGTM 167
G +L SG D +V +D+ ++ G W V + P V A+GS D +
Sbjct: 1085 DGAMLASGGDDQIVRLWDISSGNCLYTLQ---GYTSW-VRFLVFSPNGVTLANGSSDQIV 1140
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
++WD KC+ T+Q + V V F P G++L A+G D+ +D+ +
Sbjct: 1141 RLWD--ISSKKCLYTLQ--GHTNWVNAVAFSPDGATL-ASGSGDQTVRLWDISSS-KCLY 1194
Query: 228 VFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWR 286
+ GH V + F D TL + +D ++LW +N S+ + T++GH + N V +
Sbjct: 1195 ILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFN--P 1252
Query: 287 HGGLLGCGSETNQVFVYDV 305
G +L GS V ++D+
Sbjct: 1253 DGSMLASGSSDKTVRLWDI 1271
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 45 IGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLK 104
+ + F+P S+ A+G + +R++ I S SK + + +SS+
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISS-------------SKCLHTFQGHTSWVSSVT 1333
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
+ P G +L SG D V + + ++ H V SV +S +L ASGS D
Sbjct: 1334 FSP--DGTMLASGSDDQTVRLWSISSGECLYTFLGHTNW-VGSVIFSPDGAIL-ASGSGD 1389
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
T+++W GKC+ T+Q + V + F P G+ L+A+G D+ +++ +
Sbjct: 1390 QTVRLWS--ISSGKCLYTLQ--GHNNWVGSIVFSPDGT-LLASGSDDQTVRLWNISSG-E 1443
Query: 225 PVLVFDGHRKTVTYIRFLDVDTLVTAGTDG-CLKLWNVNDSRVIRTYKGH 273
+ GH +V + F ++ +G+D +KLW+V I+T K
Sbjct: 1444 CLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECIKTLKSE 1493
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 22/244 (9%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
SGR+L +G D V + + K I H V SV + + ++ A GS G++++
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP-VESVRLNTPEELIVA-GSQSGSIRV 89
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K + T+ ++ +C ++FHP+G VA+G D +D+R+ V +
Sbjct: 90 WD--LEAAKILRTLM--GHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRRK-GCVFRY 143
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D L +A D +KLW++ +++ + GH N V +
Sbjct: 144 RGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEY- 202
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGG 348
LL GS + +D + F+ V+ E G V SV + D C L +G
Sbjct: 203 -LLASGSSDRTIRFWD--------LEKFQVVSCIEGEPGPVRSVLF---NPDGCCLYSGC 250
Query: 349 SDGL 352
D L
Sbjct: 251 QDSL 254
>sp|O13282|TAF5_SCHPO Transcription initiation factor TFIID subunit 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=taf5 PE=1 SV=1
Length = 643
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 16/275 (5%)
Query: 41 VSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKL 100
++++ EF P ++ A G IR+++IK+ P V+ S + +
Sbjct: 323 TNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPV 382
Query: 101 SSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGAS 160
+ P + L S D + ++ K + H G VW V + A+
Sbjct: 383 YGTTFSP--DNKYLLSCSEDASARLWSVDTKTALVAYKGHTGP-VWDVAFGPFGHYF-AT 438
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
S D T Q+W CD + + S V CV FHP S+ V G +DK +DV
Sbjct: 439 ASHDQTAQLWS--CDHIYPLRVF--AGHLSDVDCVTFHP-NSAYVLTGSSDKTCRLWDVH 493
Query: 221 KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ V VF+GH + VT + D T+ +A ++G + LW++ R I+T +GH N
Sbjct: 494 RG-HSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGH--RGNI 550
Query: 280 VGLSVWRHGGLLGCGSETNQVFVYDV---RWGEPV 311
LS R +L G V +DV + PV
Sbjct: 551 YSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPV 585
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
S RVL +G D V + + K I H + SV + + VL A+G+ GT+++
Sbjct: 28 SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSG-IDSVTFDASE-VLVAAGAASGTIKL 85
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD + K V T+ + RS V+FHPFG A+G D +D+RK + +
Sbjct: 86 WD--LEEAKIVRTL--TGHRSNCISVDFHPFGE-FFASGSLDTNLKIWDIRKK-GCIHTY 139
Query: 230 DGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHG 288
GH + V +RF D +V+ G D +K+W++ +++ +K H L H
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG--QIQSLDFHPHE 197
Query: 289 GLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSE 325
LL GS V +D + FE + + G E
Sbjct: 198 FLLATGSADRTVKFWD--------LETFELIGSGGPE 226
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 15/171 (8%)
Query: 187 ASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT 246
A +AV C++ S ++ G D K + + K + +L GH + + F +
Sbjct: 14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGK-PNAILSLYGHSSGIDSVTFDASEV 72
Query: 247 LVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDV 305
LV AG G +KLW++ +++++RT GH N + + G GS + ++D+
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGH--RSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 306 RWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
R + +H + +G V R D +V+GG D ++ V+
Sbjct: 131 R--KKGCIHTY---------KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKP 107
++F P FA+G + ++I++I+ H H++ + TP
Sbjct: 107 VDFHPFGEFFASGSLDTNLKIWDIRKKGCIH---TYKGHTRGVNVLRFTP---------- 153
Query: 108 GTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D +V +DL + E H G ++ S+D+ + +L A+GS D T+
Sbjct: 154 --DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEG-QIQSLDFHPHEFLL-ATGSADRTV 209
Query: 168 QMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVL 227
+ WD + + + + P + V C+ F+P G +++ K +++ +P+
Sbjct: 210 KFWD--LETFELIGSGGPET--AGVRCLSFNPDGKTVLCGLQESLKIFSW------EPIR 259
Query: 228 VFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRV 266
DG V + R D++ L + C+ +W V+ SR
Sbjct: 260 CHDG--VDVGWSRLSDMNVHEGKLLGCSYNQSCVGVWVVDLSRT 301
>sp|O94620|CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf17 PE=1 SV=1
Length = 340
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 37/277 (13%)
Query: 47 VIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAK--LSSLK 104
V FDPS S FA+GG+ R+I ++N+ V +Y + K ++ L+
Sbjct: 55 VARFDPSGSYFASGGMDRQILLWNV--------------FGDVKNYGVLNGCKGAITDLQ 100
Query: 105 WKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDD 164
W + RV+ D +M +D I + H G V ++D K L S SDD
Sbjct: 101 WSRDS--RVVYCSSSDTHLMSWDAVSGQKIRKHKGHAG-VVNALDVLKVGSELLTSVSDD 157
Query: 165 GTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVD 224
TM++WD R C+ T++ +AV + + V G D +D+R
Sbjct: 158 CTMKVWDSRSK--DCIKTIEEKYPLTAVAIAQ----QGTQVFIGGIDGAIKIWDLRNN-H 210
Query: 225 PVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNV----NDSRVIRTYKG--HVNNR 277
V GH+ +T + D +L++ D +++++V + R ++ ++G H
Sbjct: 211 CSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEH 270
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVY----DVRWGEP 310
N +G++ R+ +G GS V+V+ D+R+ P
Sbjct: 271 NLLGVAWSRNSRFVGAGSSDKNVYVWSATGDLRYVLP 307
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
++GR+L +G D V + + K + H + S+ S + ++ A GS G+++
Sbjct: 31 STGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP-IESLQISAKEELIVA-GSQSGSIR 88
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
+WD + K + T+ ++ +C ++FHP+GS VA+G D +DVR+ +
Sbjct: 89 VWD--LEAAKILRTLL--GHKANICSLDFHPYGS-FVASGSLDTDIKLWDVRRK-GCIFK 142
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRH 287
+ H + V +RF D L +A D +KLW++ +V+ + GH N V +
Sbjct: 143 YKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEY 202
Query: 288 GGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAG 347
LL GS + +D + F V+ E V + + D C L G
Sbjct: 203 --LLASGSSDRTIRFWD--------LEKFHVVSCIEEEATPVRCILF---NPDGCCLYGG 249
Query: 348 GSDGL 352
D L
Sbjct: 250 FQDSL 254
>sp|Q55AR8|SNR40_DICDI U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium
discoideum GN=snrnp40 PE=3 SV=1
Length = 355
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 28/264 (10%)
Query: 49 EFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPG 108
+F+ + A+GG ++I ++N+ + + +Y + K + L+
Sbjct: 69 KFNSYGTALASGGSDKEIFLWNV--------------YGECINYSVLKGHKGTILELHWS 114
Query: 109 TSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQ 168
T + + D + +D K I EH G V S ++ P L ASGSDD + +
Sbjct: 115 TDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGV-VNSCCPARRGPPLVASGSDDRSAR 173
Query: 169 MWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV 228
++D R G Q ++VC F L+ G D +D+R DP+
Sbjct: 174 IFDTRSKGS--THLFQHKYPVTSVC---FSDASDQLITGGI-DNVIRVWDIRNQEDPLYT 227
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVND----SRVIRTYKGHVNN--RNFVG 281
H+ T+T D L++ D K+W++ +R I+T+ G NN +N +
Sbjct: 228 LASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIK 287
Query: 282 LSVWRHGGLLGCGSETNQVFVYDV 305
S G +GCGS QV+++D
Sbjct: 288 SSWSIDGRRIGCGSSDRQVYIWDT 311
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 128/313 (40%), Gaps = 37/313 (11%)
Query: 46 GVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKW 105
G+ D ++ TGGI + + +Y+ + + + H+K + + P ++++
Sbjct: 213 GITALDIKGNLSLTGGIDKTVVLYDYEK---EQVMQTFKGHNKKINAVVLHPDNITAISA 269
Query: 106 KPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDG 165
+ RV + D + D+ + P+ + S++ S GD +L S SDD
Sbjct: 270 SADSHIRVWSATDSSSKAI-IDVHQ-APVTD---------ISLNAS-GDYIL--SASDDS 315
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDP 225
D R C +V+P S+ AV +EFHP G + G AD +D++
Sbjct: 316 YWAFSDIRSGKSLCKVSVEP-GSQIAVHSIEFHPDGL-IFGTGAADAVVKIWDLKNQT-V 372
Query: 226 VLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
F GH V I F + L T DG +KLW++ + ++T+ + LS
Sbjct: 373 AAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKNLKTFANE-EKQPINSLSF 431
Query: 285 WRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE-PVTAAGSERGFVSSVCWRRVGEDECT 343
G LG G + QV + W E V + D PVT R GE+ +
Sbjct: 432 DMTGTFLGIGGQKVQVL-HVKSWSEVVSLSDHSGPVTGV-------------RFGENARS 477
Query: 344 LVAGGSDGLLHVF 356
LV D L VF
Sbjct: 478 LVTCSLDKSLRVF 490
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
S+++ P G + G+G D VV +DL+ + H V S+ +S+ L A+G
Sbjct: 343 SIEFHP--DGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAA-VRSIAFSENGYYL-ATG 398
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S+DG +++WD R K + T + + + + F G+ L G +K V+
Sbjct: 399 SEDGEVKLWDLR--KLKNLKTF-ANEEKQPINSLSFDMTGTFL---GIGGQKVQVLHVKS 452
Query: 222 MVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWN 260
+ V + D H VT +RF + +LVT D L++++
Sbjct: 453 WSEVVSLSD-HSGPVTGVRFGENARSLVTCSLDKSLRVFS 491
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 61.2 bits (147), Expect = 1e-08, Method: Composition-based stats.
Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 50/317 (15%)
Query: 4 FHDHQQPQAETTNERARCEWDFNLRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIA 63
F +Q A +N++ WD+ +SS +D I I F P A+
Sbjct: 944 FSPDRQILASGSNDKTVKLWDWQTGKYISSLEGH----TDFIYGIAFSPDSQTLASASTD 999
Query: 64 RKIRIYNIKS-----VLVDHP--VVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGS 116
+R++NI + +L++H V AVV H + G+++ +
Sbjct: 1000 SSVRLWNISTGQCFQILLEHTDWVYAVVFHPQ----------------------GKIIAT 1037
Query: 117 GDYDGVVMEYDLEKKVPIFERDEHGGR---RVWSVDYSKGDPVLGASGSDDGTMQMWDPR 173
G D V +++ + EH + WS D L AS S D ++++WD
Sbjct: 1038 GSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQ-----LLASASADQSVRLWD-- 1090
Query: 174 CDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHR 233
C G+CV ++ ++R V F P G ++A D+ +D ++ + GH
Sbjct: 1091 CCTGRCVGILRGHSNR--VYSAIFSPNG-EIIATCSTDQTVKIWDWQQG-KCLKTLTGHT 1146
Query: 234 KTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLG 292
V I F D L +A D +++W+VN + GH + + V S G ++
Sbjct: 1147 NWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFS--PDGEVVA 1204
Query: 293 CGSETNQVFVYDVRWGE 309
GS+ V +++V+ GE
Sbjct: 1205 SGSQDQTVRIWNVKTGE 1221
Score = 53.9 bits (128), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 24/228 (10%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P + AT +R++ +KS + ++ HS + + +P
Sbjct: 650 FSPEGQLLATCDTDCHVRVWEVKSGKL---LLICRGHSNWVRFVVFSP------------ 694
Query: 110 SGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQM 169
G +L S D V + + V I H V+SV + L AS S D T+++
Sbjct: 695 DGEILASCGADENVKLWSVRDGVCIKTLTGHE-HEVFSVAFHPDGETL-ASASGDKTIKL 752
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVF 229
WD G C+ T+ + V CV F P G++L A+ AD +DV + +
Sbjct: 753 WD--IQDGTCLQTL--TGHTDWVRCVAFSPDGNTL-ASSAADHTIKLWDVSQG-KCLRTL 806
Query: 230 DGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNN 276
H V + F D TL + D +K+WN + ++TY GH N+
Sbjct: 807 KSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNS 854
Score = 43.9 bits (102), Expect = 0.002, Method: Composition-based stats.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 31/249 (12%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
+D + + F P + ATG ++++NI + + + +HS K+
Sbjct: 1020 TDWVYAVVFHPQGKIIATGSADCTVKLWNIST---GQCLKTLSEHSD----------KIL 1066
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASG 161
+ W P G++L S D V +D + H RV+S +S ++ A+
Sbjct: 1067 GMAWSP--DGQLLASASADQSVRLWDCCTGRCVGILRGHSN-RVYSAIFSPNGEII-ATC 1122
Query: 162 SDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRK 221
S D T+++WD GKC+ T+ + + V + F P G ++A+ D+ +DV
Sbjct: 1123 STDQTVKIWD--WQQGKCLKTL--TGHTNWVFDIAFSPDG-KILASASHDQTVRIWDVNT 1177
Query: 222 MVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDS------RVIRTYKGHV 274
+ GH V+ + F +V +G+ D +++WNV R R Y+G +
Sbjct: 1178 GKCHHICI-GHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQILRAKRLYEG-M 1235
Query: 275 NNRNFVGLS 283
N GL+
Sbjct: 1236 NITGVTGLT 1244
Score = 43.5 bits (101), Expect = 0.002, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 36/268 (13%)
Query: 48 IEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVC-DYYICTPAKLSSLKWK 106
+ F A+G R I+I+N H+ C YI + S+ +
Sbjct: 816 VAFSADGQTLASGSGDRTIKIWNY--------------HTGECLKTYIGHTNSVYSIAYS 861
Query: 107 PGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHG-GRRVWSVDYSKGDPVLGASGSDDG 165
P + ++L SG D + +D + + I + HG V SV +S L A S D
Sbjct: 862 PDS--KILVSGSGDRTIKLWDCQTHICI--KTLHGHTNEVCSVAFSPDGQTL-ACVSLDQ 916
Query: 166 TMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK--KAYAYDVRKMV 223
++++W+ C G+C+ + + V F P ++A+G DK K + + K +
Sbjct: 917 SVRLWN--CRTGQCLKAWYGNTDWALP--VAFSP-DRQILASGSNDKTVKLWDWQTGKYI 971
Query: 224 DPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGL 282
+ +GH + I F D TL +A TD ++LWN++ + + H ++V
Sbjct: 972 SSL---EGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHT---DWVYA 1025
Query: 283 SVWR-HGGLLGCGSETNQVFVYDVRWGE 309
V+ G ++ GS V ++++ G+
Sbjct: 1026 VVFHPQGKIIATGSADCTVKLWNISTGQ 1053
>sp|Q4V8C4|WDR5B_RAT WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2
SV=1
Length = 328
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 61/262 (23%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
A +SS+K+ P +G L S D +++ YD + K ++ WS D S+
Sbjct: 40 AAISSVKFSP--NGEWLASSAADALIIIWGAYDGKCKKTLYGHSLEISDVAWSSDSSRL- 96
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
S SDD T+++WD R GKC+ T++ V C +F+P S+L+ +G D+
Sbjct: 97 ----VSASDDKTLKLWDVR--SGKCLKTLK--GHSDFVFCCDFNP-PSNLIVSGSFDESV 147
Query: 215 YAYDVRK---------MVDPVLVFDGH--------------------------------- 232
++V+ DP+ H
Sbjct: 148 KIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEG 207
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGG 289
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV
Sbjct: 208 NPPVSFVKFSPNGKYILTATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSVTGRKW 267
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
++ GSE N V++++++ E V
Sbjct: 268 VVS-GSEDNMVYIWNLQTKEIV 288
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGC-ADKKAY 215
L SGS DG ++WD G+C+ T+ + V V+F P G ++ A + K +
Sbjct: 179 LIVSGSYDGLCRIWDAA--SGQCLRTLADEGN-PPVSFVKFSPNGKYILTATLDSTLKLW 235
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTY 270
Y + + + GH K Y F +V+ D + +WN+ +++
Sbjct: 236 DYSRGRCLK---TYTGH-KNEKYCIFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRL 291
Query: 271 KGHVN 275
+GH +
Sbjct: 292 QGHTD 296
>sp|O43172|PRP4_HUMAN U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4
PE=1 SV=2
Length = 522
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T +++ A V + DP D A+ ++++++ S D PV + H
Sbjct: 266 LHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDS---DEPVADIEGH 322
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+ +++ + W P SGR LG+ YD +DLE + I ++ H V+
Sbjct: 323 T----------VRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGH-SMGVY 369
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + + D L +G D ++WD R G+C+ ++ + + F P G +A
Sbjct: 370 DIAFHQ-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGYH-IA 423
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDS 264
G D +D+R+ V H+ VT ++F + + L+T D K+W
Sbjct: 424 TGSGDNTCKVWDLRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 482
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 483 SPLKTLAGHEG--KVMGLDISSDGQLIATCS 511
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D+ +D
Sbjct: 297 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGR-FLGTTCYDRSWRLWD 351
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 352 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 408
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 409 EIYGINFSPNGYHIATGSGDNTCKVWDLR 437
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKLWDVR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAY---AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
AV V+F P G L A+ AD+ AYD + + L GH ++ + + D
Sbjct: 43 AVSSVKFSPNGEWL-ASSSADRLIIIWGAYDGK--YEKTLY--GHNLEISDVAWSSDSSR 97
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
LV+A D LKLW+V + ++T KGH N
Sbjct: 98 LVSASDDKTLKLWDVRSGKCLKTLKGHSN 126
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAY 215
L SGS DG ++WD G+C+ T+ V V+F P G ++ A + K +
Sbjct: 181 LIVSGSYDGLCRIWDAA--SGQCLKTLVDD-DNPPVSFVKFSPNGKYILTATLDNTLKLW 237
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTY 270
Y + + + GH K Y F + +V+ D + +WN+ +++
Sbjct: 238 DYSRGRCLK---TYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 293
Query: 271 KGHVN 275
+GH +
Sbjct: 294 QGHTD 298
>sp|Q5RE95|WDR5B_PONAB WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1
Length = 330
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D +++ YD + + ++ + WS D S+
Sbjct: 44 VSSVKFSP--NGEWLASSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRL--- 98
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
S SDD T+++WD R GKC+ T++ ++ V C F+P S+L+ +G D+
Sbjct: 99 --VSASDDKTLKLWDMR--SGKCLKTLKGHSNY--VFCCNFNP-PSNLIISGSFDETVKI 151
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
++V+ DPV + D
Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211
Query: 235 TVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV G +
Sbjct: 212 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSV-TGGKWI 270
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 271 VSGSEDNLVYIWNLQTKEIV 290
Score = 35.0 bits (79), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAY---AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDT 246
AV V+F P G L A+ AD+ AYD + GH ++ + + D
Sbjct: 43 AVSSVKFSPNGEWL-ASSSADRLIIIWGAYDGKYE----RTLYGHNLEISDVAWSSDSSR 97
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
LV+A D LKLW++ + ++T KGH N
Sbjct: 98 LVSASDDKTLKLWDMRSGKCLKTLKGHSN 126
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAY 215
L SGS DG ++WD G+C+ T+ V V+F P G ++ A + K +
Sbjct: 181 LIVSGSYDGLCRIWDAA--SGQCLKTLVDD-DNPPVSFVKFSPNGKYILTATLDNTLKLW 237
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTY 270
Y + + + GH K Y F + +V+ D + +WN+ +++
Sbjct: 238 DYSRGRCLK---TYTGH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 293
Query: 271 KGHVN 275
+GH +
Sbjct: 294 QGHTD 298
>sp|O74184|WAT1_SCHPO WD repeat-containing protein wat1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=wat1 PE=1 SV=1
Length = 314
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
SV Y VL S D T++ W+ G C T+Q + S+ C+ P L A
Sbjct: 2 SVQYPPQHSVLLVSSGYDHTIRFWEAL--SGICSRTIQHADSQVNRLCIS--PDKKFLAA 57
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSR 265
AG + Y + + P++ F+GH VT I F D L T+ DG +K+W++
Sbjct: 58 AGNPHVRLYDINTSSQM-PLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPS 116
Query: 266 VIRTY--KGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAG 323
V R Y K VN+ L G LL C ++ +V +D+ GE H+ P
Sbjct: 117 VQRNYDHKSPVNDL----LIHPNQGELLSC-DQSGRVRAWDL--GENSCTHELIP----- 164
Query: 324 SERGFVSSVCWRRVGEDECTLVAGGSDGLLHVF 356
E +SS+ VG D L+AG + G +V+
Sbjct: 165 EEDVPMSSIT---VGSDGSMLIAGNNKGNCYVW 194
Score = 32.3 bits (72), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
GH++ V F D LVTA +D +LW ++ IR Y GH
Sbjct: 255 LQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSSGETIRQYSGH 300
>sp|Q9D7H2|WDR5B_MOUSE WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1
Length = 328
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 61/262 (23%)
Query: 98 AKLSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGD 154
A +SS+K+ P +G L S D +++ YD K ++ WS D S+
Sbjct: 40 AAISSVKFSP--NGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRL- 96
Query: 155 PVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
S SDD T+++WD R GKC+ T++ V C +F+P S+L+ +G D+
Sbjct: 97 ----VSASDDKTLKVWDMR--SGKCLKTLK--GHSDFVFCCDFNP-PSNLIVSGSFDESV 147
Query: 215 YAYDVRK---------MVDPV----------LVFDGH----------------------- 232
++V+ DP+ L+ G
Sbjct: 148 KIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEG 207
Query: 233 RKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGG 289
V++++F + ++TA D LKLW+ + R ++TY GH N + F SV
Sbjct: 208 NPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKW 267
Query: 290 LLGCGSETNQVFVYDVRWGEPV 311
++ GSE N V++++++ E V
Sbjct: 268 VVS-GSEDNMVYIWNLQTKEIV 288
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAY 215
L SGS DG ++WD G+C+ T+ + V V+F P G ++ A + K +
Sbjct: 179 LIVSGSYDGLCRIWDAA--SGQCLRTLADEGN-PPVSFVKFSPNGKYILTATLDNTLKLW 235
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTY 270
Y + + + GH K Y F +V+ D + +WN+ +++
Sbjct: 236 DYSRGRCLK---TYTGH-KNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRL 291
Query: 271 KGHVN 275
+GH +
Sbjct: 292 QGHTD 296
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 145 VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSL 204
VW +D S + ASGS D T ++W + + + V CV+FHP S+
Sbjct: 387 VWDLDISPYS-LYFASGSHDRTARLWS----FDRTYPLRIYAGHLADVDCVKFHP-NSNY 440
Query: 205 VAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVND 263
+A G DK + ++ + V +F GHR V + F + L +AG D LKLW++
Sbjct: 441 LATGSTDKTVRLWSAQQG-NSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 499
Query: 264 SRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
+ + +GH + N L+ GL+ S N V V+D+R
Sbjct: 500 GTLYKELRGHTD--NITSLTFSPDSGLIASASMDNSVRVWDIR 540
>sp|O74855|NLE1_SCHPO Ribosome assembly protein C18.05c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC18.05c PE=3 SV=1
Length = 502
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 102 SLKWKPGTSGR-VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR---VWSVDYSKGDPVL 157
S ++ P TS R V GSGD+ + +D + + PI H W+ D S +
Sbjct: 139 SAQFSPSTSSRLVTGSGDFTARL--WDCDTQTPIATMKGHTNWVSCVAWAPDAS-----I 191
Query: 158 GASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFH---PFGSSLVAAGCADKKA 214
A+GS D T++ WDP+ + + + A+C H G L+A+G D
Sbjct: 192 IATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTV 251
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
++V K+ + GH +T +R+ + + ++ D +++W+ D + + KGH
Sbjct: 252 RIWNV-KLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHA 310
Query: 275 NNRNFVGLSV 284
N + LS
Sbjct: 311 ARVNHLSLST 320
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 128/323 (39%), Gaps = 57/323 (17%)
Query: 24 DFNLRTTVSSSSSPNAAV---SDSIGVIEFDPSDSVFATGGIARKIRIYNIK--SVLVDH 78
DF R + +P A + ++ + + + P S+ ATG + IR ++ K S + D
Sbjct: 156 DFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGD- 214
Query: 79 PVVAVVDHSKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERD 138
A+ H+K P L+ P + +L SG D V ++++ + +F
Sbjct: 215 ---ALRRHTKPIMALCWQPLHLA-----PDSGPYLLASGSKDNTVRIWNVKLRTLLFTLS 266
Query: 139 EHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASR--------- 189
H + V + + + S S D T+++WD + GKC+ ++ A+R
Sbjct: 267 GHTAP-ITCVRWGGQNWIY--SSSYDKTIRIWDAK--DGKCLHILKGHAARVNHLSLSTE 321
Query: 190 -----SAVCCVEFHP--------------------FGSSLVAAGCADKKAYAYDVRKMVD 224
A +F P G LV+A D + +D +K
Sbjct: 322 HVLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSAS-DDLQLILWDPQKSTK 380
Query: 225 PVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLS 283
P+ GH+K V + F D + TA D ++LW+ + + T +GHV S
Sbjct: 381 PITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWS 440
Query: 284 VWRHGGLLGCGSETNQVFVYDVR 306
LL S+ + V+DVR
Sbjct: 441 T--DSRLLVSSSQDTTLKVWDVR 461
>sp|Q9DAW6|PRP4_MOUSE U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4
PE=2 SV=1
Length = 521
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T +++ A V + D D A+ ++++++ S D PV + H
Sbjct: 265 LHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDS---DEPVADIEGH 321
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+ +++ + W P SGR LG+ YD +DLE + I ++ H V+
Sbjct: 322 T----------VRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGH-SMGVY 368
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + + D L +G D ++WD R G+C+ ++ + + F P G +A
Sbjct: 369 DIAFHQ-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGYH-IA 422
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDS 264
G D +D+R+ V H+ VT ++F + D L+T D K+W
Sbjct: 423 TGSGDNTCKVWDLRQR-RCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGW 481
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 482 SPLKTLAGHEG--KVMGLDISSDGQLIATCS 510
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D+ +D
Sbjct: 296 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGR-FLGTTCYDRSWRLWD 350
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 351 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 407
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 408 EIYGINFSPNGYHIATGSGDNTCKVWDLR 436
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 69/283 (24%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P G+ L S D + YD + FER G + S D
Sbjct: 49 ISSVKFSP--DGKWLASASADKTIKIWGAYDGK-----FERTLEGHKEGISDIAWSQDSK 101
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L S SDD T+++WD + GK V T++ + V V F+P S+L+ +G D+
Sbjct: 102 LICSASDDKTIKIWD--VESGKMVKTLK--GHKEYVFGVSFNP-QSNLIVSGSFDENVRI 156
Query: 217 YDVR-----KMV----DPV----------LVFDGHR-----------------------K 234
+DV KM+ DPV LV G K
Sbjct: 157 WDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGK 216
Query: 235 TVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSR-VIRTYKGHVNNRN--FVGLSVWRHGGL 290
V++++F V AGT D L+LW+ N+++ ++TY GH N + F SV G
Sbjct: 217 EVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSV-TCGKW 275
Query: 291 LGCGSETNQVFVYDVRWGEPVWVHDFEPVTAAGSERGFVSSVC 333
+ GSE N +++Y+++ E V T AG E ++ C
Sbjct: 276 IVTGSEDNLIYIYNLQTREIV-------QTLAGHEDVVLTVAC 311
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 191 AVCCVEFHPFGSSLVAAGCADKKAY---AYDVRKMVDPVLVFDGHRKTVTYIRF-LDVDT 246
++ V+F P G L A+ ADK AYD + +GH++ ++ I + D
Sbjct: 48 SISSVKFSPDGKWL-ASASADKTIKIWGAYDGKFE----RTLEGHKEGISDIAWSQDSKL 102
Query: 247 LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV-GLSVWRHGGLLGCGSETNQVFVYDV 305
+ +A D +K+W+V ++++T KGH + +V G+S L+ GS V ++DV
Sbjct: 103 ICSASDDKTIKIWDVESGKMVKTLKGH---KEYVFGVSFNPQSNLIVSGSFDENVRIWDV 159
Query: 306 RWGE 309
GE
Sbjct: 160 NTGE 163
>sp|Q6C7Q4|HAT2_YARLI Histone acetyltransferase type B subunit 2 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=HAT2 PE=3 SV=1
Length = 452
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 140 HGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
H V V +S L S SDD T+++WD R G K T++ S + ++F+P
Sbjct: 256 HHDAAVNDVKFSYKMDFLIGSASDDCTLRLWDTRKPGNKAACTIKES---RGINSLDFNP 312
Query: 200 FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFL--DVDTLVTAGTDGCLK 257
LVA G AD+ +D+RKM P+ H VT +++ L + G D +
Sbjct: 313 HSEFLVATGSADETVKVWDMRKMDTPISQLYSHCDEVTKVQWCPHQPSVLASGGHDRAIL 372
Query: 258 LWNV 261
+W++
Sbjct: 373 VWDI 376
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 143 RRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASR-SAVCCVEFHPFG 201
R + S+D++ L A+GS D T+++WD R K + + S V V++ P
Sbjct: 303 RGINSLDFNPHSEFLVATGSADETVKVWDMR----KMDTPISQLYSHCDEVTKVQWCPHQ 358
Query: 202 SSLVAAGCADKKAYAYDVRKMVD-----------PVLVFD--GHRKTVTYIRFLDVD--- 245
S++A+G D+ +D+ ++ D P L+F GH R D D
Sbjct: 359 PSVLASGGHDRAILVWDIARLHDDLSSDENDEGPPELLFHHGGHSS-----RISDFDWHP 413
Query: 246 ----TLVTAGTDGCLKLWNVNDS 264
+ +A D +++W + +S
Sbjct: 414 TLPWVIASAAEDNVIQVWRMAES 436
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 141 GGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPF 200
G V++V + ++ +G+D G +Q+W + DG S ++ A+ + F P
Sbjct: 1362 GNSGVYAVSFLHDGSIIATAGAD-GNIQLWHSQ-DG----SLLKTLPGNKAIYGISFTPQ 1415
Query: 201 GSSLVAAGCADKKAYAYDVR--KMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLK 257
G L+A+ ADK + VR K + ++ GH V + F D TL +A D +K
Sbjct: 1416 GD-LIASANADKTVKIWRVRDGKALKTLI---GHDNEVNKVNFSPDGKTLASASRDNTVK 1471
Query: 258 LWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
LWNV+D + +T KGH + +V S G ++ S + ++D
Sbjct: 1472 LWNVSDGKFKKTLKGHTDEVFWVSFS--PDGKIIASASADKTIRLWD 1516
Score = 55.8 bits (133), Expect = 5e-07, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
++SL + P G+ L S D + + + + H VW V++S + A
Sbjct: 1242 VNSLSFSP--DGKTLASASADKTIKLWRIADGKLVKTLKGHNDS-VWDVNFSSDGKAI-A 1297
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
S S D T+++W+ G + T + V V F P S+++A+ D +
Sbjct: 1298 SASRDNTIKLWNRH---GIELETF--TGHSGGVYAVNFLP-DSNIIASASLDNTIRLWQ- 1350
Query: 220 RKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
R ++ P+ V G+ V + FL D + TAG DG ++LW+ D +++T G N+
Sbjct: 1351 RPLISPLEVLAGN-SGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPG---NKA 1406
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWGE 309
G+S G L+ + V ++ VR G+
Sbjct: 1407 IYGISFTPQGDLIASANADKTVKIWRVRDGK 1437
Score = 54.7 bits (130), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS S D ++++WD G+ + T+ + + V V F P G + +AAG DK +
Sbjct: 1171 ASASSDHSIKLWD--TTSGQLLMTL--TGHSAGVITVRFSPDGQT-IAAGSEDKTVKLWH 1225
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
R+ + +GH+ V + F D TL +A D +KLW + D ++++T KGH
Sbjct: 1226 -RQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGH 1280
Score = 49.3 bits (116), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 128 LEKKVPIFERDEHGGRR-------VWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCV 180
L+K + ++ RD R V+SV +S + ASG D T+++W + G +
Sbjct: 1092 LDKTIKLWSRDGRLFRTLNGHEDAVYSVSFSPDGQTI-ASGGSDKTIKLW--QTSDGTLL 1148
Query: 181 STVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIR 240
T+ + V V F P G +L +A +D +D ++ GH V +R
Sbjct: 1149 KTI--TGHEQTVNNVYFSPDGKNLASAS-SDHSIKLWDTTSG-QLLMTLTGHSAGVITVR 1204
Query: 241 FL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGH---VNNRNF 279
F D T+ D +KLW+ D ++++T GH VN+ +F
Sbjct: 1205 FSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSF 1247
Score = 42.0 bits (97), Expect = 0.007, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 20/149 (13%)
Query: 205 VAAGCADK--KAYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNV 261
+A+G DK K ++ D R +GH V + F D T+ + G+D +KLW
Sbjct: 1087 IASGSLDKTIKLWSRDGRLF----RTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQT 1142
Query: 262 NDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVWVHDFEPVTA 321
+D +++T GH N V S G L S + + ++D G+ + +T
Sbjct: 1143 SDGTLLKTITGHEQTVNNVYFS--PDGKNLASASSDHSIKLWDTTSGQLL-------MTL 1193
Query: 322 AGSERGFVSSVCWRRVGEDECTLVAGGSD 350
G G ++ R D T+ AG D
Sbjct: 1194 TGHSAGVITV----RFSPDGQTIAAGSED 1218
Score = 40.8 bits (94), Expect = 0.016, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS S D T+++W+ GK T++ V V F P G ++A+ ADK +D
Sbjct: 1462 ASASRDNTVKLWN--VSDGKFKKTLK--GHTDEVFWVSFSPDGK-IIASASADKTIRLWD 1516
Query: 219 VRKMVDPVLVFDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
+ + H V + F D L + D +KLW +D ++ T+ GH N
Sbjct: 1517 SFSG-NLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSN 1573
>sp|P90916|LIN53_CAEEL Probable histone-binding protein lin-53 OS=Caenorhabditis elegans
GN=lin-53 PE=1 SV=2
Length = 417
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIF----ERDEHGGRR------VWSVDYSK 152
L W P G +L + D D V +D+ + +D G W V +
Sbjct: 178 LSWNPNKEGLILSASD-DQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLH-- 234
Query: 153 GDPVLGASGSDDGTMQMWDPRCDG-GKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD 211
D V G+ G DD + +WD R G C+ A + V C+ F+P+ ++A G AD
Sbjct: 235 -DGVFGSVG-DDKKLLIWDVRTSTPGHCID-----AHSAEVNCLAFNPYSEFILATGSAD 287
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNV 261
K +D+R + + F+ HR + +++ + L ++GTD L +W++
Sbjct: 288 KTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
>sp|Q3MHE2|PRP4_BOVIN U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4
PE=2 SV=1
Length = 521
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 113/271 (41%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T +++ A V + D D A+ ++++++ S D PV + H
Sbjct: 265 LHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDS---DEPVADIEGH 321
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+ +++ + W P SGR LG+ YD +DLE + I ++ H V+
Sbjct: 322 T----------VRVARVTWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGH-SMGVY 368
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + + D L +G D ++WD R G+C+ ++ + + F P G +A
Sbjct: 369 DIAFHQ-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGYH-IA 422
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDS 264
G D +D+R+ V H+ VT ++F + + L+T D K+W
Sbjct: 423 TGSGDNTCKVWDLRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 481
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 482 SPLKTLAGHEG--KVMGLDISSDGQLIATCS 510
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D+ +D
Sbjct: 296 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVTWHPSGR-FLGTTCYDRSWRLWD 350
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 351 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 407
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 408 EIYGINFSPNGYHIATGSGDNTCKVWDLR 436
>sp|Q5NVD0|PRP4_PONAB U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4
PE=2 SV=1
Length = 521
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 113/271 (41%), Gaps = 27/271 (9%)
Query: 27 LRTTVSSSSSPNAAVSDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDH 86
L T +++ A V + D D A+ ++++++ S D PV + H
Sbjct: 265 LHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDS---DEPVADIEGH 321
Query: 87 SKVCDYYICTPAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVW 146
+ +++ + W P SGR LG+ YD +DLE + I ++ H V+
Sbjct: 322 T----------VRVARVMWHP--SGRFLGTTCYDRSWRLWDLEAQEEILHQEGH-SMGVY 368
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVA 206
+ + + D L +G D ++WD R G+C+ ++ + + F P G +A
Sbjct: 369 DIAFHQ-DGSLAGTGGLDAFGRVWDLRT--GRCIMFLE--GHLKEIYGINFSPNGYH-IA 422
Query: 207 AGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDV--DTLVTAGTDGCLKLWNVNDS 264
G D +D+R+ V H+ VT ++F + + L+T D K+W
Sbjct: 423 TGSGDNTCKVWDLRQR-RCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGW 481
Query: 265 RVIRTYKGHVNNRNFVGLSVWRHGGLLGCGS 295
++T GH +GL + G L+ S
Sbjct: 482 SPLKTLAGHEG--KVMGLDISSDGQLIATCS 510
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 159 ASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD 218
AS + DG++++W D + V+ ++ R V V +HP G + C D+ +D
Sbjct: 296 ASCAADGSVKLWS--LDSDEPVADIEGHTVR--VARVMWHPSGR-FLGTTCYDRSWRLWD 350
Query: 219 VRKMVDPVLVFDGHRKTVTYIRFLDVDTLV-TAGTDGCLKLWNVNDSRVIRTYKGHVNNR 277
+ + +L +GH V I F +L T G D ++W++ R I +GH+ +
Sbjct: 351 LEAQ-EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL--K 407
Query: 278 NFVGLSVWRHGGLLGCGSETNQVFVYDVR 306
G++ +G + GS N V+D+R
Sbjct: 408 EIYGINFSPNGYHIATGSGDNTCKVWDLR 436
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D ++ YD + FE+ G + S D
Sbjct: 48 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSDSN 100
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L S SDD T+++WD GKC+ T++ + V C F+P S+L+ +G D+
Sbjct: 101 LLVSASDDKTLKIWD--VSSGKCLKTLK--GHSNYVFCCNFNP-QSNLIVSGSFDESVRI 155
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
+DV+ DPV + D
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 235 TVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + A T D LKLW+ + + ++TY GH N + F SV G +
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV-TGGKWI 274
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 275 VSGSEDNLVYIWNLQTKEIV 294
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 191 AVCCVEFHPFGSSLVAAGCADKK-----AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DV 244
AV V+F P G L A+ ADK AY K + GH+ ++ + + D
Sbjct: 47 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTIS------GHKLGISDVAWSSDS 99
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
+ LV+A D LK+W+V+ + ++T KGH N + L+ GS V ++D
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--PQSNLIVSGSFDESVRIWD 157
Query: 305 VRWGE 309
V+ G+
Sbjct: 158 VKTGK 162
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
++ SG +D V +D++ + H V +V +++ D L S S DG ++WD
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP-VSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVFD 230
G+C+ T+ V V+F P G ++AA + K + Y K + +
Sbjct: 200 TA--SGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK---TYT 253
Query: 231 GHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
GH K Y F + +V+ D + +WN+ +++ +GH +
Sbjct: 254 GH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 81/222 (36%), Gaps = 24/222 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + F+P ++ +G +RI+++K+ + A D +
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF--------- 179
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
G ++ S YDG+ +D + + V V +S G +L A+
Sbjct: 180 ------NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
D T+++WD GKC+ T + F G + +G D Y ++++
Sbjct: 234 L--DNTLKLWD--YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 289
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG---TDGCLKLW 259
+ V GH V + ++ + D +KLW
Sbjct: 290 TK-EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D ++ YD + FE+ G + S D
Sbjct: 48 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSDSN 100
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L S SDD T+++WD GKC+ T++ + V C F+P S+L+ +G D+
Sbjct: 101 LLVSASDDKTLKIWD--VSSGKCLKTLK--GHSNYVFCCNFNP-QSNLIVSGSFDESVRI 155
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
+DV+ DPV + D
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 235 TVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + A T D LKLW+ + + ++TY GH N + F SV G +
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV-TGGKWI 274
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 275 VSGSEDNLVYIWNLQTKEIV 294
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 191 AVCCVEFHPFGSSLVAAGCADKK-----AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DV 244
AV V+F P G L A+ ADK AY K + GH+ ++ + + D
Sbjct: 47 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTIS------GHKLGISDVAWSSDS 99
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
+ LV+A D LK+W+V+ + ++T KGH N + L+ GS V ++D
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--PQSNLIVSGSFDESVRIWD 157
Query: 305 VRWGE 309
V+ G+
Sbjct: 158 VKTGK 162
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
++ SG +D V +D++ + H V +V +++ D L S S DG ++WD
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP-VSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVFD 230
G+C+ T+ V V+F P G ++AA + K + Y K + +
Sbjct: 200 TA--SGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK---TYT 253
Query: 231 GHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
GH K Y F + +V+ D + +WN+ +++ +GH +
Sbjct: 254 GH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 81/222 (36%), Gaps = 24/222 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + F+P ++ +G +RI+++K+ + A D +
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF--------- 179
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
G ++ S YDG+ +D + + V V +S G +L A+
Sbjct: 180 ------NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
D T+++WD GKC+ T + F G + +G D Y ++++
Sbjct: 234 L--DNTLKLWD--YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 289
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG---TDGCLKLW 259
+ V GH V + ++ + D +KLW
Sbjct: 290 TK-EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D ++ YD + FE+ G + S D
Sbjct: 48 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSDSN 100
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L S SDD T+++WD GKC+ T++ + V C F+P S+L+ +G D+
Sbjct: 101 LLVSASDDKTLKIWD--VSSGKCLKTLK--GHSNYVFCCNFNP-QSNLIVSGSFDESVRI 155
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
+DV+ DPV + D
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 235 TVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + A T D LKLW+ + + ++TY GH N + F SV G +
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV-TGGKWI 274
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 275 VSGSEDNLVYIWNLQTKEIV 294
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 191 AVCCVEFHPFGSSLVAAGCADKK-----AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DV 244
AV V+F P G L A+ ADK AY K + GH+ ++ + + D
Sbjct: 47 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTIS------GHKLGISDVAWSSDS 99
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
+ LV+A D LK+W+V+ + ++T KGH N + L+ GS V ++D
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--PQSNLIVSGSFDESVRIWD 157
Query: 305 VRWGE 309
V+ G+
Sbjct: 158 VKTGK 162
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
++ SG +D V +D++ + H V +V +++ D L S S DG ++WD
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP-VSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVFD 230
G+C+ T+ V V+F P G ++AA + K + Y K + +
Sbjct: 200 TA--SGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK---TYT 253
Query: 231 GHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
GH K Y F + +V+ D + +WN+ +++ +GH +
Sbjct: 254 GH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 81/222 (36%), Gaps = 24/222 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + F+P ++ +G +RI+++K+ + A D +
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF--------- 179
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
G ++ S YDG+ +D + + V V +S G +L A+
Sbjct: 180 ------NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
D T+++WD GKC+ T + F G + +G D Y ++++
Sbjct: 234 L--DNTLKLWD--YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 289
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG---TDGCLKLW 259
+ V GH V + ++ + D +KLW
Sbjct: 290 TK-EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 61/260 (23%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVM---EYDLEKKVPIFERDEHGGRRVWSVDYSKGDPV 156
+SS+K+ P +G L S D ++ YD + FE+ G + S D
Sbjct: 48 VSSVKFSP--NGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKLGISDVAWSSDSN 100
Query: 157 LGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYA 216
L S SDD T+++WD GKC+ T++ + V C F+P S+L+ +G D+
Sbjct: 101 LLVSASDDKTLKIWD--VSSGKCLKTLK--GHSNYVFCCNFNP-QSNLIVSGSFDESVRI 155
Query: 217 YDVRK---------MVDPV---------------------------------LVFDGHRK 234
+DV+ DPV + D
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 235 TVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN--FVGLSVWRHGGLL 291
V++++F + A T D LKLW+ + + ++TY GH N + F SV G +
Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV-TGGKWI 274
Query: 292 GCGSETNQVFVYDVRWGEPV 311
GSE N V++++++ E V
Sbjct: 275 VSGSEDNLVYIWNLQTKEIV 294
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 15/125 (12%)
Query: 191 AVCCVEFHPFGSSLVAAGCADKK-----AYAYDVRKMVDPVLVFDGHRKTVTYIRFL-DV 244
AV V+F P G L A+ ADK AY K + GH+ ++ + + D
Sbjct: 47 AVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTIS------GHKLGISDVAWSSDS 99
Query: 245 DTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYD 304
+ LV+A D LK+W+V+ + ++T KGH N + L+ GS V ++D
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFN--PQSNLIVSGSFDESVRIWD 157
Query: 305 VRWGE 309
V+ G+
Sbjct: 158 VKTGK 162
Score = 35.0 bits (79), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 15/170 (8%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
++ SG +D V +D++ + H V +V +++ D L S S DG ++WD
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP-VSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVFD 230
G+C+ T+ V V+F P G ++AA + K + Y K + +
Sbjct: 200 TA--SGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK---TYT 253
Query: 231 GHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
GH K Y F + +V+ D + +WN+ +++ +GH +
Sbjct: 254 GH-KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD 302
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 81/222 (36%), Gaps = 24/222 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + F+P ++ +G +RI+++K+ + A D +
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF--------- 179
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
G ++ S YDG+ +D + + V V +S G +L A+
Sbjct: 180 ------NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
D T+++WD GKC+ T + F G + +G D Y ++++
Sbjct: 234 L--DNTLKLWD--YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 289
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG---TDGCLKLW 259
+ V GH V + ++ + D +KLW
Sbjct: 290 TK-EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
>sp|P0CS42|LIS1_CRYNJ Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PAC1 PE=3 SV=1
Length = 433
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
L AS S+D T+++WD + G T++ AV V+F P G L+A +D
Sbjct: 118 TLLASASEDATVKLWD--WEAGDMERTLK--GHTKAVMDVDFDPRGG-LMATCSSDLTLK 172
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D V GH +V+ +RF+ D +TLV+A D +++W V+ I+T+ GH
Sbjct: 173 LWDTANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHA 232
Query: 275 N 275
Sbjct: 233 E 233
>sp|P0CS43|LIS1_CRYNB Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PAC1 PE=3 SV=1
Length = 433
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 156 VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAY 215
L AS S+D T+++WD + G T++ AV V+F P G L+A +D
Sbjct: 118 TLLASASEDATVKLWD--WEAGDMERTLK--GHTKAVMDVDFDPRGG-LMATCSSDLTLK 172
Query: 216 AYDVRKMVDPVLVFDGHRKTVTYIRFL-DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHV 274
+D V GH +V+ +RF+ D +TLV+A D +++W V+ I+T+ GH
Sbjct: 173 LWDTANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHA 232
Query: 275 N 275
Sbjct: 233 E 233
>sp|Q61Y48|LIN53_CAEBR Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae
GN=lin-53 PE=3 SV=2
Length = 416
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 103 LKWKPGTSGRVLGSGDYDGVVMEYDLE---------KKVPIFERDEHGGRRV-WSVDYSK 152
L W P G +L + D D V +D+ K IF+ E V W V +
Sbjct: 178 LSWNPNKEGLILSASD-DQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLH-- 234
Query: 153 GDPVLGASGSDDGTMQMWDPRCD-GGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCAD 211
D V G+ G DD + +WD R + G + A + V C+ F+P+ ++A G AD
Sbjct: 235 -DGVFGSVG-DDKKLLIWDLRTNVPGHAID-----AHSAEVNCLAFNPYSEFILATGSAD 287
Query: 212 KKAYAYDVRKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCLKLWNV 261
K +D+R + + F+ HR + +++ + L ++GTD L +W++
Sbjct: 288 KTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDL 339
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 13/215 (6%)
Query: 100 LSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGA 159
+S + W + R+L SG D + ++L + H V+ +++ ++
Sbjct: 117 ISDVAW--SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHS-NYVFCCNFNPQSNLI-V 172
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
SGS D ++++WD R GKC+ T+ A V V F+ GS L+ + D +D
Sbjct: 173 SGSFDESVRIWDVRT--GKCLKTLP--AHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 227
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHVNNRN 278
+ D V++++F + A T D LKLW+ + + ++TY GH N +
Sbjct: 228 ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY 287
Query: 279 --FVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPV 311
F SV G + GSE N V++++++ E V
Sbjct: 288 CIFANFSV-TGGKWIVSGSEDNMVYIWNLQSKEVV 321
Score = 35.4 bits (80), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 15/170 (8%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
++ SG +D V +D+ + H V +V +++ D L S S DG ++WD
Sbjct: 169 NLIVSGSFDESVRIWDVRTGKCLKTLPAHS-DPVSAVHFNR-DGSLIVSSSYDGLCRIWD 226
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADK-KAYAYDVRKMVDPVLVFD 230
G+C+ T+ V V+F P G ++AA + K + Y K + +
Sbjct: 227 --TASGQCLKTLI-DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK---TYT 280
Query: 231 GHRKTVTYIRFLDVDT-----LVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
GH K Y F + +V+ D + +WN+ V++ +GH +
Sbjct: 281 GH-KNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTD 329
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 42/222 (18%), Positives = 82/222 (36%), Gaps = 24/222 (10%)
Query: 42 SDSIGVIEFDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLS 101
S+ + F+P ++ +G +RI+++++ + A D +
Sbjct: 156 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF--------- 206
Query: 102 SLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYS-KGDPVLGAS 160
G ++ S YDG+ +D + + V V +S G +L A
Sbjct: 207 ------NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA- 259
Query: 161 GSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVR 220
+ D T+++WD GKC+ T + F G + +G D Y ++++
Sbjct: 260 -TLDNTLKLWD--YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQ 316
Query: 221 KMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG---TDGCLKLW 259
+ V GH TV + ++ + D +KLW
Sbjct: 317 SK-EVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
>sp|Q9UTN4|PFS2_SCHPO Polyadenylation factor subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pfs2 PE=4 SV=1
Length = 509
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 142 GRRVWSVDY--SKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHP 199
G V +VD+ SKG L ASGS D ++ WDPR G C++T+ ++ + F
Sbjct: 206 GWDVKTVDWHPSKG---LLASGSKDNLVKFWDPRT--GTCIATLH--GHKNTIMQASFQK 258
Query: 200 -FGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRF--LDVDTLVTAGTDGCL 256
FGS+ +A D +D+R M D V V GH K V + + L + L T G+DG +
Sbjct: 259 NFGSNYLATVSRDSTCRVFDLRAMKD-VRVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSV 317
Query: 257 KLWNVNDSRVIRTYKGHVNNRN 278
+++++ ++ K H + N
Sbjct: 318 NHYSLDEPPLLSQQKYHEKHPN 339
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 10/150 (6%)
Query: 160 SGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDV 219
+GS G +W+ + ++ + AV C E+ G L++ Y
Sbjct: 98 TGSSTGEFTLWNGLTFNFELIN----QSHDYAVRCAEWSTDGRWLISGDGGGMVKY---F 150
Query: 220 RKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRN 278
++ V + H V + F D+ VTA DG LK+WN + S GH +
Sbjct: 151 EPNLNNVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVK 210
Query: 279 FVGLSVWRHGGLLGCGSETNQVFVYDVRWG 308
V + GLL GS+ N V +D R G
Sbjct: 211 TVDWHPSK--GLLASGSKDNLVKFWDPRTG 238
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 119/296 (40%), Gaps = 40/296 (13%)
Query: 39 AAVSDSIGVIEFDPSDSVFATGGIARKIRIY--NIKSVLVDHPVVAVVDHSKVCDYYICT 96
A D++ + F PS + A+G + +RI+ N+K V + V + C
Sbjct: 58 AGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKG----ESTVFRAHTATVRSVHFC- 112
Query: 97 PAKLSSLKWKPGTSGRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDP- 155
+ G+ + D V + ++ +F +H W V +K P
Sbjct: 113 ------------SDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHIN---W-VRCAKFSPD 156
Query: 156 -VLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKA 214
L S SDD T+++WD +CV + V V+FHP G+ + AAG D
Sbjct: 157 GRLIVSASDDKTVKLWDK--TSRECVHSYCEHG--GFVTYVDFHPSGTCIAAAG-MDNTV 211
Query: 215 YAYDVRKMVDPVLVFDGHRKTVTYIRFLDV-DTLVTAGTDGCLKLWNVNDSRVIRTYKGH 273
+DVR + + H V + F + LVTA +D LK+ ++ + R++ T GH
Sbjct: 212 KVWDVRTH-RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGH 270
Query: 274 VNNRNFVGLSVWRHGGLLGCGSETNQVFVYD-----VRWGEPVWVHDFEPVTAAGS 324
V S R G G QV V+ V +GE + V P T A S
Sbjct: 271 QGPATTVAFS--RTGEYFASGGSDEQVMVWKSNFDIVDYGEVLRVQR-PPATRASS 323
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 56/278 (20%)
Query: 112 RVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+ L SG D +M + ++ + + H V V++S +L ASGS D T+++W
Sbjct: 32 KQLASGSMDSCLMVWHMKPQTRAYRFAGHKDA-VTCVNFSPSGHLL-ASGSRDKTVRIWV 89
Query: 172 PRCDGGKCVSTVQPSASRSA--------------------------------------VC 193
P G V + RS V
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVR 149
Query: 194 CVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGT 252
C +F P G +V+A DK +D + + V + H VTY+ F T + AG
Sbjct: 150 CAKFSPDGRLIVSAS-DDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 253 DGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVWRHGGLLGCGSETNQVFVYDVRWGEPVW 312
D +K+W+V R+++ Y+ H N LS G L S + + + D+ G ++
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVN--ALSFHPSGNYLVTASSDSTLKILDLMEGRLLY 265
Query: 313 VHDFEPVTAAGSERGFVSSVCWRRVGEDECTLVAGGSD 350
T G +G ++V + R GE +GGSD
Sbjct: 266 -------TLHG-HQGPATTVAFSRTGE---YFASGGSD 292
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 224 DPVLV--FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFV 280
DP L F GHR VT + F L+ L + D CL +W++ + GH + V
Sbjct: 8 DPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCV 67
Query: 281 GLSVWRHGGLLGCGSETNQVFVY 303
S G LL GS V ++
Sbjct: 68 NFS--PSGHLLASGSRDKTVRIW 88
>sp|Q2KJJ5|TBL3_BOVIN Transducin beta-like protein 3 OS=Bos taurus GN=TBL3 PE=2 SV=1
Length = 800
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 147 SVDYSKGDPVLGASGSDDGTMQMWD-PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLV 205
SV + D +L A+GS D T ++W PRC + + T S R + CV+F P L
Sbjct: 484 SVAVAPNDKLL-ATGSQDRTAKLWALPRC---QLLGTF--SGHRRGLWCVQFSPMDQVLA 537
Query: 206 AAGCADKKAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDT-LVTAGTDGCLKLWNVNDS 264
A AD + ++ + F+GH +V + F+ T L+++G+DG LKLW + ++
Sbjct: 538 TAS-ADGTIKLWALQDF-SCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNN 595
Query: 265 RVIRTYKGH 273
+RT H
Sbjct: 596 ECVRTLDAH 604
>sp|B6Q4Z5|SCONB_PENMQ Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59
/ QM 7333) GN=sconB PE=3 SV=1
Length = 660
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 16/164 (9%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEH-GGRRVWSVDYSKGDPVLGASGSDDGTMQMWD 171
+L +G YD + +D+E + H G R D +K SGS D T+++W+
Sbjct: 354 ILATGSYDTTIKIWDMETGEELRTLTGHTSGIRCLQFDETKL-----ISGSIDRTLKVWN 408
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
R G+C+ST + + + F +S++A+G DK ++ + G
Sbjct: 409 WRT--GECISTY--TGHLGGIIGLHFQ---NSILASGSTDKTVKIWNFED--KSTFLLRG 459
Query: 232 HRKTVTYIRFLDVDTLVTAGTDGC-LKLWNVNDSRVIRTYKGHV 274
H V +R V + +D C +KLW+++ + IRT++GHV
Sbjct: 460 HSDWVNAVRVDSCSRTVLSASDDCTVKLWDLDSKQCIRTFQGHV 503
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 226 VLVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVN 275
V VF GH V ++F D + L T D +K+W++ +RT GH +
Sbjct: 335 VKVFKGHTNGVMCLQFED-NILATGSYDTTIKIWDMETGEELRTLTGHTS 383
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 81/221 (36%), Gaps = 26/221 (11%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
+L SG D V ++ E K R VD S VL S SDD T+++WD
Sbjct: 434 ILASGSTDKTVKIWNFEDKSTFLLRGHSDWVNAVRVD-SCSRTVL--SASDDCTVKLWD- 489
Query: 173 RCDGGKCVSTVQPSASR--SAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPV---- 226
D +C+ T Q + + F A+ D A V
Sbjct: 490 -LDSKQCIRTFQGHVGQVQQVIPLPREFEFEEGHDASHEEDSNASVSGDESPSSQVSCSP 548
Query: 227 --LVFDGHRKTVTYIRFLDVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSV 284
F+G R R++ +T+ D ++LW R +RT+ GH+ +
Sbjct: 549 TAAFFEGDRPAPP--RYI-----LTSALDSTIRLWETYTGRCLRTFFGHLEGVWALSADT 601
Query: 285 WRHGGLLGCGSETNQVFVYDVRWG--EPVWVHDFEPVTAAG 323
R + G+E V ++D R G E + PVT G
Sbjct: 602 LR----IVSGAEDRMVKIWDPRTGKCERTFTGHSGPVTCVG 638
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 111 GRVLGSGDYDGVVMEYDLEKKVPIFERDEHGGRR-VWSVDYSKGDPVLGASGSDDGTMQM 169
G+ L +G D ++ +D++ + HG + ++S+D+S+ + ASGS D T+++
Sbjct: 356 GKYLATGAEDKLIRVWDIQSRT--IRNTFHGHEQDIYSLDFSRDGRTI-ASGSGDRTVRL 412
Query: 170 WDPRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLV- 228
WD V +++ V V P VAAG DK +D+R + L
Sbjct: 413 WDIETGQNTSVLSIE-----DGVTTVAISP-DKQFVAAGSLDKSVRVWDMRGYLAERLEG 466
Query: 229 FDGHRKTVTYIRF-LDVDTLVTAGTDGCLKLWNVN------------DSRVIRTYKGHVN 275
DGH+ +V + F D LV+ D +K+W ++ R I+T++GH
Sbjct: 467 PDGHKDSVYSVAFSPDGRNLVSGSLDKTIKMWELSAPRGIPSSAPPKGGRCIKTFEGH-- 524
Query: 276 NRNFVGLSV 284
R+FV LSV
Sbjct: 525 -RDFV-LSV 531
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 172 PRCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDG 231
PR + V T+Q S VCCV F G VA GC ++ A YDV ++ D
Sbjct: 283 PRVLDVELVHTLQ---HESVVCCVRFSMDGK-YVATGC-NRSAQIYDVETGEKLCILQDE 337
Query: 232 HRKTV--TYIRFL----DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNFVGLSVW 285
+ YIR + D L T D +++W++ + T+ GH ++ L
Sbjct: 338 NIDLTGDLYIRSVCFSPDGKYLATGAEDKLIRVWDIQSRTIRNTFHGH--EQDIYSLDFS 395
Query: 286 RHGGLLGCGSETNQVFVYDVRWGEPVWVHDFE 317
R G + GS V ++D+ G+ V E
Sbjct: 396 RDGRTIASGSGDRTVRLWDIETGQNTSVLSIE 427
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 50 FDPSDSVFATGGIARKIRIYNIKSVLVDHPVVAVVDHSKVCDYYICTPAKLSSLKWKPGT 109
F P ATG + IR+++I+S + + H D Y SL +
Sbjct: 352 FSPDGKYLATGAEDKLIRVWDIQSRTIRNTF-----HGHEQDIY--------SLDFS--R 396
Query: 110 SGRVLGSGDYDGVVMEYDLE--KKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTM 167
GR + SG D V +D+E + + ++ V +V S D A+GS D ++
Sbjct: 397 DGRTIASGSGDRTVRLWDIETGQNTSVLSIEDG----VTTVAISP-DKQFVAAGSLDKSV 451
Query: 168 QMWDPRCDGGKCVSTVQ-PSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYD------VR 220
++WD R G ++ P + +V V F P G +LV +G DK ++ +
Sbjct: 452 RVWDMR---GYLAERLEGPDGHKDSVYSVAFSPDGRNLV-SGSLDKTIKMWELSAPRGIP 507
Query: 221 KMVDP-----VLVFDGHRKTVTYIRFLDVDTLVTAGT-DGCLKLWNVNDSRVIRTYKGHV 274
P + F+GHR V + V +G+ D ++ W+ +GH
Sbjct: 508 SSAPPKGGRCIKTFEGHRDFVLSVALTPDSQWVLSGSKDRGVQFWDPRTGHTQLMLQGHK 567
Query: 275 NN 276
N+
Sbjct: 568 NS 569
>sp|P41811|COPB2_YEAST Coatomer subunit beta' OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC27 PE=1 SV=1
Length = 889
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 113 VLGSGDYDGVVMEYDLEKKVPIFERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDP 172
++GS D+ V Y+ +KV FE R S+ P + SGSDD T+++W+
Sbjct: 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR---SIAVHPTKPYV-LSGSDDLTVKLWNW 126
Query: 173 RCDGGKCVSTVQPSASRSAVCCVEFHPFGSSLVAAGCADKKAYAYDVRKMVDPVLVFDGH 232
+ T + V CV F+P S A+GC D+ + + + + G
Sbjct: 127 ENNWA-LEQTFE--GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQ 183
Query: 233 RKTVTYIRFL---DVDTLVTAGTDGCLKLWNVNDSRVIRTYKGHVNNRNF 279
+ V Y+ + D ++TA D +K+W+ + T +GH++N +F
Sbjct: 184 ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF 233
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 13/139 (9%)
Query: 135 FERDEHGGRRVWSVDYSKGDPVLGASGSDDGTMQMWDPRCDGGKCVSTVQPSASRSAVCC 194
FE EH V V ++ DP ASG D T+++W G + + V
Sbjct: 136 FEGHEH---FVMCVAFNPKDPSTFASGCLDRTVKVWSL---GQSTPNFTLTTGQERGVNY 189
Query: 195 VEFHPFGSSLVAAGCADK---KAYAYDVRKMVDPVLVFDGHRKTVTYIRFLDVDTLVTAG 251
V+++P +D K + Y + V +GH V++ F ++ +G
Sbjct: 190 VDYYPLPDKPYMITASDDLTIKIWDYQTKSCV---ATLEGHMSNVSFAVFHPTLPIIISG 246
Query: 252 T-DGCLKLWNVNDSRVIRT 269
+ DG LK+WN + +V +T
Sbjct: 247 SEDGTLKIWNSSTYKVEKT 265
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,167,271
Number of Sequences: 539616
Number of extensions: 6745232
Number of successful extensions: 18642
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 961
Number of HSP's that attempted gapping in prelim test: 14605
Number of HSP's gapped (non-prelim): 3706
length of query: 366
length of database: 191,569,459
effective HSP length: 119
effective length of query: 247
effective length of database: 127,355,155
effective search space: 31456723285
effective search space used: 31456723285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)