BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017774
(366 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49434|AAH_ARATH Allantoate deiminase, chloroplastic OS=Arabidopsis thaliana GN=AAH
PE=1 SV=2
Length = 525
Score = 574 bits (1479), Expect = e-163, Method: Compositional matrix adjust.
Identities = 278/375 (74%), Positives = 325/375 (86%), Gaps = 15/375 (4%)
Query: 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIF 60
MSPAS+RA LIR WMEDAGL TWVD++GNVHGRVE N S+QALLIGSH+DTV+DAG +
Sbjct: 118 MSPASIRAIPLIRGWMEDAGLSTWVDYMGNVHGRVEPKNGSSQALLIGSHMDTVIDAGKY 177
Query: 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSA 120
DGSLGII+AISALKVLK G+LG+LKRPVEVIAFSDEEGVRFQSTFLGSAALAGI+PVS
Sbjct: 178 DGSLGIISAISALKVLKIDGRLGELKRPVEVIAFSDEEGVRFQSTFLGSAALAGIMPVSR 237
Query: 121 LRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGV 180
L V+DKSG++V DAL+ENSIDI +E+L+QLKYDPASVWGY+EVHIEQGPVLEWVG+PLGV
Sbjct: 238 LEVTDKSGISVQDALKENSIDITDENLMQLKYDPASVWGYVEVHIEQGPVLEWVGYPLGV 297
Query: 181 VQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRS 240
V+GIAGQTRLKVTV+GSQGHAGTVPMSMRQDPMT AAELIVLLE +CK+PKD+LS + +
Sbjct: 298 VKGIAGQTRLKVTVKGSQGHAGTVPMSMRQDPMTGAAELIVLLESVCKNPKDYLSCNVQC 357
Query: 241 NCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 300
N T+ESL++SLVCTVGEIS+WPSASNVIPG+VTFTVDLR IDD GR+ +L++LS ++YQ
Sbjct: 358 NEDTVESLANSLVCTVGEISTWPSASNVIPGQVTFTVDLRTIDDVGRKAILHDLSTRMYQ 417
Query: 301 ICEKRSVSCIVERK---------------LKSASYAALKRMTGATQHEIPVIMSGAGHDA 345
IC+KRS+ C +ERK LKSA+ +ALK+MTG Q E+PV+MSGAGHDA
Sbjct: 418 ICDKRSLLCSIERKHDADAVMSDPQLSLQLKSAAQSALKKMTGEVQDEVPVLMSGAGHDA 477
Query: 346 MAMSHLTKVCSLLCR 360
MAM+HLTKV L R
Sbjct: 478 MAMAHLTKVGMLFVR 492
>sp|Q01264|HYUC_PSESN Hydantoin utilization protein C OS=Pseudomonas sp. (strain NS671)
GN=hyuC PE=1 SV=1
Length = 414
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 194/360 (53%), Gaps = 26/360 (7%)
Query: 11 LIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAI 70
L+ +WM +AGL DH GN+ GR EG S +++IGSH+D+V + G FDG +G++ I
Sbjct: 44 LVSEWMREAGLTVTHDHFGNLIGRKEGETPSLPSVMIGSHIDSVRNGGKFDGVIGVLAGI 103
Query: 71 SALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130
+ + + + +EV+AF +EEG RF GS + G + L+ D + VT
Sbjct: 104 EIVHAISEANVVHE--HSIEVVAFCEEEGSRFNDGLFGSRGMVGKVKPEDLQKVDDNNVT 161
Query: 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRL 190
+AL+ I + Q + + Y E+HIEQGP LE +P+G+V GIAG +
Sbjct: 162 RYEALKTFGFGIDPDFTHQSIREIGDIKHYFEMHIEQGPYLEKNNYPIGIVSGIAGPSWF 221
Query: 191 KVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSS 250
KV + G GHAGTVPMS+R+DP+ AAE+I +E LC + ++
Sbjct: 222 KVRLVGEAGHAGTVPMSLRKDPLVGAAEVIKEVETLC-----------------MNDPNA 264
Query: 251 SLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCI 310
V TVG I+++P SN+IP V FT+D+R I+ R ++ ++ ++ + R +
Sbjct: 265 PTVGTVGRIAAFPGGSNIIPESVEFTLDIRDIELERRNKIIEKIEEKIKLVSNTRGLEYQ 324
Query: 311 VERKLKSASYA-------ALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 363
+E+ + + +LK+ + + P+I+SGAGHDAM ++ +T++ + R N
Sbjct: 325 IEKNMAAVPVKCSENLINSLKQSCKELEIDAPIIVSGAGHDAMFLAEITEIGMVFVRCRN 384
>sp|Q53389|AMAB2_GEOSE N-carbamoyl-L-amino acid hydrolase OS=Geobacillus
stearothermophilus GN=amaB PE=1 SV=1
Length = 409
Score = 211 bits (536), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 203/368 (55%), Gaps = 38/368 (10%)
Query: 7 RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGI 66
RA +L+ +M +AGL + D GN+ GR EG N A +L+GSHLD+V + G FDG LG+
Sbjct: 36 RAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGV 95
Query: 67 ITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDK 126
+ + ++ + G + P+EV+AF+DEEG RF+ +GS A+AG LP AL D
Sbjct: 96 LAGVEVVQTMNEHGVV--THHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDA 153
Query: 127 SGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAG 186
G+++ +A+++ +D + L Q P +V Y+E+HIEQG VLE G P+G+V GIAG
Sbjct: 154 EGISLAEAMKQAGLD--PDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAG 211
Query: 187 QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLE 246
+K T+ G HAG PMS+R+DPM AAA++I+++E +
Sbjct: 212 LIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR----------------- 254
Query: 247 SLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS 306
+ + V TVG++ +P NVIP V F +DLR + R+ V ++ + I ++R+
Sbjct: 255 --TGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERN 312
Query: 307 VSCIVER-----------KLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVC 355
V ER ++K A+ AA +++ G +P SGA HD++ ++ + +
Sbjct: 313 VRVTTERLQEMPPVLCSDEVKRAAEAACQKL-GYPSFWLP---SGAAHDSVQLAPICPIG 368
Query: 356 SLLCRLNN 363
+ R +
Sbjct: 369 MIFVRSQD 376
>sp|P37113|AMAB1_GEOSE N-carbamoyl-L-amino acid hydrolase OS=Geobacillus
stearothermophilus GN=amaB PE=3 SV=2
Length = 409
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 200/368 (54%), Gaps = 38/368 (10%)
Query: 7 RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGI 66
RA +L+ +M +AGL + D GN+ GR EG N A +L+GSHLD+V + G FDG LG+
Sbjct: 36 RAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGV 95
Query: 67 ITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDK 126
+ + ++ + G + P+EV+AF+DEEG RF+ +GS A+AG LP AL D
Sbjct: 96 LAGVEVVQTMNEHGVV--THHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDA 153
Query: 127 SGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAG 186
G+++ +A+++ +D + L Q P +V Y+E+HIEQG VLE G P+G+V GIAG
Sbjct: 154 EGISLAEAMKQAGLD--PDRLPQAARKPGTVKAYVELHIEQGRVLEEAGLPVGIVTGIAG 211
Query: 187 QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLE 246
+K T+ G HAG PMS+R+DPM AAA++I+++E +
Sbjct: 212 LIWVKFTIAGPAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR----------------- 254
Query: 247 SLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS 306
+ + V TVG++ +P NVIP V F +DLR + R+ V ++ + I ++R+
Sbjct: 255 --TGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERN 312
Query: 307 VSCIVER-----------KLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVC 355
V ER +K A+ A K++ G +P SGA HD + ++ + +
Sbjct: 313 VRLTTERLQEMAPVLCSEVVKQAAERACKQL-GYPPFWLP---SGAAHDGVQLAPICPIG 368
Query: 356 SLLCRLNN 363
+ R +
Sbjct: 369 MIFVRSQD 376
>sp|P77425|ALLC_ECOLI Allantoate amidohydrolase OS=Escherichia coli (strain K12) GN=allC
PE=1 SV=1
Length = 411
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 170/365 (46%), Gaps = 32/365 (8%)
Query: 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFD 61
SP + ++ M +GL T D +GN++GR+ G + +L GSH+DTVV+ G D
Sbjct: 33 SPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLD 92
Query: 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL-PVSA 120
G G + A A+ LK+ + G R VEV+A ++EEG RF F GS + G+ P
Sbjct: 93 GQFGALAAWLAIDWLKT--QYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDV 150
Query: 121 LRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGV 180
+ D G + +DA++ + L + + ++E+HIEQG VLE G +GV
Sbjct: 151 RNICDAKGNSFVDAMKACGFTLPNAPLTPRQ----DIKAFVELHIEQGCVLESNGQSIGV 206
Query: 181 VQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRS 240
V I GQ R VT+ G HAGT PM R+D + A R+C
Sbjct: 207 VNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYA-------FSRICHQ----------- 248
Query: 241 NCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 300
+ + + LV T G++ P+ NV+PG+ TFT+D R D A +L N +
Sbjct: 249 SVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRA 308
Query: 301 ICEKRSVSCIVER-------KLKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTK 353
IC++ + ++ + A L + + V+ SGAGHDA +
Sbjct: 309 ICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVP 368
Query: 354 VCSLL 358
C +
Sbjct: 369 TCMIF 373
>sp|O32149|ALLC_BACSU Allantoate amidohydrolase OS=Bacillus subtilis (strain 168) GN=pucF
PE=2 SV=1
Length = 412
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 177/355 (49%), Gaps = 32/355 (9%)
Query: 12 IRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAIS 71
++ M GL T D +GNV GR+ G + + ++ GSH+DTV++ G +DG+ G++ A+
Sbjct: 46 VKTEMSSFGLETRFDDVGNVFGRLSGTQSPDEVIVTGSHIDTVINGGKYDGAYGVLAAML 105
Query: 72 ALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL-PVSALRVSDKSGVT 130
ALK LK T G K+ +E ++ +EEG RF T+ GS + G+ A D+SGV+
Sbjct: 106 ALKQLKET--YGAPKKTLEAVSLCEEEGSRFPMTYWGSGNMTGVFSEQDAKEPRDESGVS 163
Query: 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRL 190
+ A+ E+ + + Q Y + ++E+HIEQG LE G LG+V IAGQ R
Sbjct: 164 LQTAMHESGFG---KGVFQSAYR-TDISAFVELHIEQGKTLEMSGRDLGIVTSIAGQRRY 219
Query: 191 KVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSS 250
VT+ G HAGT M R+DP+ A++ +I L L D L
Sbjct: 220 LVTLEGECNHAGTTSMKWRKDPLAASSRIIHEL---------LLRSD---------ELPD 261
Query: 251 SLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCI 310
L T G+I++ P+ +NVIPG V F++D+R E ++ + IC ++ + +
Sbjct: 262 ELRLTCGKITAEPNVANVIPGRVQFSIDIRHQHQHVLEQFHQDMVALINGICLQKGIRAV 321
Query: 311 VERKLKSASYAALKRMTGA-------TQHEIPVIMSGAGHDAMAMSHLTKVCSLL 358
++ ++ +R+ A ++SGAGHDA + C L
Sbjct: 322 IDEYMRIEPVPMDERLKAAAFETALENGFSCEEMVSGAGHDAQMIGRRYPACMLF 376
>sp|Q57051|Y588_HAEIN Uncharacterized hydrolase HI_0588 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0588 PE=1 SV=1
Length = 411
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 175/357 (49%), Gaps = 38/357 (10%)
Query: 7 RAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGI 66
+A N+I + ++ L D +GN+ R G A+ GSH+DTVV+AG FDG LG
Sbjct: 36 KAHNMIIELCKEYDLSIRRDSIGNLFIRKAGKEDFLPAVAFGSHIDTVVNAGKFDGPLGS 95
Query: 67 ITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGIL---PVSALRV 123
+ + L L+ + + + P+E+I F+ EE RF LGS + GI+ +S+LR
Sbjct: 96 VAGLEIL--LQLCEQNIQTRYPLELIIFTCEESSRFNFATLGSKVMCGIVNQEKLSSLR- 152
Query: 124 SDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQG 183
DK G + +A+ E ++ + Q K D + E+HIEQGP LE G +GVV G
Sbjct: 153 -DKQGKGLSEAMAEVGMNF--NLVNQAKRDAKEFKCFFELHIEQGPRLENEGKTIGVVTG 209
Query: 184 IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCS 243
IA R V ++G H+G M R D + +EL + +ER +
Sbjct: 210 IAAPIRAIVKIKGQADHSGATAMHYRHDALLGGSELSLAIER-----------------A 252
Query: 244 TLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE 303
+++ S V TVG I++ P NV+PG VD+R R++V L ++ ++ E
Sbjct: 253 AIQA-GHSTVATVGNITAKPGVMNVVPGYCELLVDIRGTHVQARDSVFELLQEEISKVSE 311
Query: 304 KRSVSCIVERKLKSASYA-----ALKRMTGATQHEI----PVIMSGAGHDAMAMSHL 351
KR + ++E +L S + T H + ++ SGAGHDAM M+ L
Sbjct: 312 KRGL--LIELQLISKDNPIILPENMVNQIAETAHSLGYSYEIMPSGAGHDAMHMATL 366
>sp|A0QZE3|Y3995_MYCS2 Putative hydrolase MSMEG_3995/MSMEI_3903 OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=MSMEG_3995 PE=1 SV=1
Length = 438
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 10 NLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIIT- 68
+ + +W+ G VD +GN+ G +E N A +L+GSHLD+ G FDG+ G++
Sbjct: 54 DWLSRWLRTRGFSVEVDPIGNLFGLLE-FNPGAPYVLVGSHLDSQPRGGRFDGAYGVLAG 112
Query: 69 AISALKVLKSTGKLGKLKR-PVEVIAFSDEEGVRFQSTFLGSAALAGILPVS-ALRVSDK 126
A++A + + + G R V V+ + +EEG RF+ + +GSA G L + AL +D
Sbjct: 113 AVAADRTRRYVTRSGFTPRYNVAVVDWFNEEGSRFKPSMMGSAVFTGTLDLEEALNTTDD 172
Query: 127 SGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAG 186
GV+V DAL +I+ + + P + Y E+HIEQG LE +G+V
Sbjct: 173 DGVSVRDALA--AINGIGDREVFSSTGPRQLAAYAEIHIEQGRELEKNNVTIGLVDRTWA 230
Query: 187 QTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLE 246
+ ++ V G QGH G + RQD + AA ++V L + +
Sbjct: 231 ANKYELNVVGIQGHTGATAIEDRQDALLGAALIVVALRDIA------------------D 272
Query: 247 SLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDD 284
L + G+++ P++ V+P EV +DLR+ +D
Sbjct: 273 EFGEELHTSCGQLTVLPNSPVVVPREVHMHLDLRSDND 310
>sp|B1MZM9|DAPEL_LEUCK N-acetyldiaminopimelate deacetylase OS=Leuconostoc citreum (strain
KM20) GN=LCK_01154 PE=3 SV=1
Length = 387
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 24/139 (17%)
Query: 184 IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCS 243
AG LKV V G+ GHA ++ +DP+ AAELI+ L+ + D ++
Sbjct: 179 FAGTAELKVDVIGTGGHAAYPHLA--KDPIVIAAELIIQLQTVVSRSVDPIA-------- 228
Query: 244 TLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE 303
V +VG I+ A+NVIP +V F +R++ G ET+L ++ +I E
Sbjct: 229 -------GGVVSVGVINGG-FANNVIPDQVHFEGTVRSMTRTGLETML----TRIRKIAE 276
Query: 304 KRSVS--CIVERKLKSASY 320
+++ + L+S SY
Sbjct: 277 GLAIANEVTINVSLESGSY 295
>sp|P45493|HIPO_CAMJE Hippurate hydrolase OS=Campylobacter jejuni subsp. jejuni serotype
O:2 (strain NCTC 11168) GN=hipO PE=3 SV=2
Length = 383
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 30/154 (19%)
Query: 170 VLEWVGFPLG------VVQG--IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221
V W P G + +G +A + V G GH G+ P + DP+ AA+ LIV
Sbjct: 157 VFGWHNMPFGSDKKFYLKKGAMMASSDSYSIEVIGRGGH-GSAPEKAK-DPIYAASLLIV 214
Query: 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRA 281
L+ + D +S V ++G ++ A N+IP T + +RA
Sbjct: 215 ALQSIVSRNVD---------------PQNSAVVSIGAFNAG-HAFNIIPDIATIKMSVRA 258
Query: 282 IDDAGRETVLYELSNQLYQICEKRSVSCIVERKL 315
+D+ R+ ++Y+IC+ + + +E K+
Sbjct: 259 LDNETRKLT----EEKIYKICKGIAQANDIEIKI 288
>sp|Q9V1I3|LYSK_PYRAB Acetyl-lysine deacetylase OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=lysK PE=3 SV=1
Length = 337
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 8 AGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTV 54
A I++ +E+ G++ ++D +GNV G EG +L+ H+DTV
Sbjct: 28 AAKFIKEKLEEYGVKAYIDKVGNVIGVKEG---EGPLILLAGHVDTV 71
>sp|Q98D57|DAPE_RHILO Succinyl-diaminopimelate desuccinylase OS=Rhizobium loti (strain
MAFF303099) GN=dapE PE=3 SV=1
Length = 397
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 20/116 (17%)
Query: 192 VTVRGSQGHAGTVPMSMRQDPMTAAAELI--VLLERLCKHPKDFLSYDGRSNCSTLESLS 249
+TV G QGHA ++ +P+ L+ +L K KDF + LE S
Sbjct: 193 ITVNGRQGHAAYPQLA--DNPVRGLMGLVDALLHPVFDKGTKDF-------QPTNLEVTS 243
Query: 250 SSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKR 305
VG A+NVIP + T T ++R D ETV E+ N+L Q +++
Sbjct: 244 ----IDVGN-----PATNVIPAKATATFNIRFNDTWTAETVQAEIHNRLDQAAKRK 290
>sp|Q9SWX9|ILL5_ARATH IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana
GN=ILL5 PE=3 SV=1
Length = 435
Score = 35.4 bits (80), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 18/99 (18%)
Query: 184 IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCS 243
+AG R K T+ G GHA ++ DP+ AA+ +I+ L+ L D L S
Sbjct: 212 MAGSGRFKATISGKGGHAALPQFAI--DPVLAASNVILSLQHLVSREADPLD----SQVV 265
Query: 244 TLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAI 282
T+ + S A NVIP VT RA+
Sbjct: 266 TVATFEGS------------DAFNVIPDSVTIGGTFRAL 292
>sp|P54955|YXEP_BACSU Uncharacterized hydrolase YxeP OS=Bacillus subtilis (strain 168)
GN=yxeP PE=1 SV=2
Length = 380
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 178 LGVVQG--IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLS 235
+GV +G +A R ++ ++G GHAG S+ DP+ AA ++I L+ +
Sbjct: 168 IGVKEGPLMASVDRFEIVIKGKGGHAGIPNNSI--DPIAAAGQIISGLQSVVSR------ 219
Query: 236 YDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETV 290
N S+L++ S + V +SW NVIP + +R R+ V
Sbjct: 220 -----NISSLQNAVVS-ITRVQAGTSW----NVIPDQAEMEGTVRTFQKEARQAV 264
>sp|Q6YRJ4|Y020_ONYPE Putative ABC transporter ATP-binding protein PAM_020 OS=Onion
yellows phytoplasma (strain OY-M) GN=PAM_020 PE=3 SV=1
Length = 588
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 286 GRETVLYELSNQLYQICEKRSVSCIVERKLKSASYAALKRMTGAT----QHEIPVIMSGA 341
G++ L E+ +++ I + ++ C V R + + S+ KR+T A+ Q +I ++
Sbjct: 420 GKQLSLTEIKTKVHAILKTCNLDCFVNRPISALSFGQKKRLTIASILVMQPQILILDEPT 479
Query: 342 -GHDAMAMSHLTKVCSLLCRLNN 363
G D + H T++ + L +LNN
Sbjct: 480 IGQD---LKHHTQIMTFLQKLNN 499
>sp|O59402|LYSK_PYRHO Acetyl-lysine deacetylase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=lysK PE=3 SV=1
Length = 325
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 8 AGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTV 54
A I++ E+ G+ +VD++GNV R G +L+ H+DTV
Sbjct: 27 AAKFIKEKFEEYGIEAYVDNVGNVIARKSG---EGPLVLLAGHIDTV 70
>sp|Q03YE3|DAPEL_LEUMM N-acetyldiaminopimelate deacetylase OS=Leuconostoc mesenteroides
subsp. mesenteroides (strain ATCC 8293 / NCDO 523)
GN=LEUM_0669 PE=3 SV=1
Length = 384
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 24/144 (16%)
Query: 184 IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCS 243
AG L++ + G GHA + +DP+ +AELI+LL+ + +D +G
Sbjct: 178 FAGTAELEIDIHGQGGHAAYP--HLGKDPIVISAELIMLLQTVVS--RDVDPIEGG---- 229
Query: 244 TLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE 303
V ++G IS +NVIP V +R++ G L +++ ++ QI E
Sbjct: 230 ---------VVSLGMISGG-FTNNVIPDTVHLAGTVRSMTKDG----LDKMTTRIRQIVE 275
Query: 304 KRSVSCIVE--RKLKSASYAALKR 325
+++ V+ +L++ SY ++
Sbjct: 276 GVALANDVKINVRLETGSYLPVEN 299
>sp|P47125|I23O_YEAST Indoleamine 2,3-dioxygenase family protein OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=BNA2 PE=1
SV=1
Length = 453
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 100 VRFQSTFLGSAALA-GILPVSALRVSDKSGVTVLDALR--ENSIDIAEESLLQ--LKYDP 154
VRF+ +GSA L G+ + A+R DK V+D L +I+ ++L++ LK +P
Sbjct: 187 VRFEK--IGSACLNHGLQILRAIRSGDKGDANVIDGLEGLAATIERLSKALMEMELKCEP 244
Query: 155 ASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRL 190
+ I + + +G P GV G GQ R+
Sbjct: 245 NVFYFKIRPFLAGWTNMSHMGLPQGVRYGAEGQYRI 280
>sp|C4R628|M28P1_PICPG Probable zinc metalloprotease PAS_chr3_0953 OS=Komagataella
pastoris (strain GS115 / ATCC 20864) GN=PAS_chr3_0953
PE=3 SV=1
Length = 990
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 30 NVHGRVEGLNASAQALLIGSHLDTV-VDAGIFDGSLGIITAISALKVLKSTGKLGKLKRP 88
NV RV+G + S +ALLI +H D+V G D +GI + + L+ L K +RP
Sbjct: 209 NVLVRVKGTDPSLEALLISAHYDSVSTSYGTTDDGMGIASMLGILEHLADK----KTERP 264
Query: 89 VEVIAFS 95
I F+
Sbjct: 265 KRDIIFN 271
>sp|B0BYP8|HIS5_ACAM1 Imidazole glycerol phosphate synthase subunit HisH OS=Acaryochloris
marina (strain MBIC 11017) GN=hisH PE=3 SV=1
Length = 214
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 14/142 (9%)
Query: 28 LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------GIFDGSLGIITAISALKVLKST 79
+GN+H +GL + ++ + +V A G FD ++ + + + V++
Sbjct: 11 MGNLHSACKGLQEAGTQTIVSDRPEDLVSADAVVLPGVGAFDPAMQHLRSRQLIPVIQDI 70
Query: 80 GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139
GK P I + + F+ + G+ A GI+P + R + G+T+ + N
Sbjct: 71 LASGK---PFLGICLGLQ--ILFEGSEEGTEAGLGIIPGTVKRFQSEPGITI-PHMGWNQ 124
Query: 140 IDIAEESLLQLKYDPASVWGYI 161
++ + L ++ PA W Y
Sbjct: 125 LEYQQPDLPLWRHSPAQPWVYF 146
>sp|A9ILD7|DAPE_BART1 Succinyl-diaminopimelate desuccinylase OS=Bartonella tribocorum
(strain CIP 105476 / IBS 506) GN=dapE PE=3 SV=1
Length = 390
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 18/116 (15%)
Query: 192 VTVRGSQGHAGTVPMSMRQ-DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSS 250
+TV+G QGH V R +P+ A++LI L ++ G N S
Sbjct: 192 ITVKGRQGH---VAFPERAANPLPLASKLIQALTQIALD-------QGTENFQ-----PS 236
Query: 251 SLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS 306
+L T I + A NVIP + T ++R D +ET++ E+ +L + EK +
Sbjct: 237 NLELTT--IDTGNLAVNVIPAQTTVRFNIRYNDLWTKETLMEEIEKRLSLVQEKNN 290
>sp|A3LW86|M28P1_PICST Probable zinc metalloprotease PICST_46351 (Fragment)
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=PICST_46351 PE=3
SV=2
Length = 937
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 29 GNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISALKVLKSTGKLGKLKR 87
N+ R+ G + + ALL+ +H D+V + G+ D +GI + + L TGK R
Sbjct: 133 NNLVVRINGTDETLPALLLSAHFDSVPSSFGVTDDGMGIASLLGVLYYY--TGKSTARPR 190
Query: 88 PVEVIAFSDEE--GVRFQSTFLGSAALAGI 115
V+ F+++E G+ ++FL G+
Sbjct: 191 RTIVLNFNNDEEFGLYGATSFLSHPWATGV 220
>sp|Q0CJD8|MDV1_ASPTN Mitochondrial division protein 1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=mdv1 PE=3 SV=2
Length = 654
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 9 GNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIIT 68
G ++ ++D +R W ++G G +EG NAS + L I D +V G D S+ +
Sbjct: 333 GTMVSAALDDT-VRVWDLNVGRCTGLLEGHNASVRCLQIE---DNIVATGSMDASVKLWD 388
Query: 69 AISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFL 107
L +S + G++ + E +D+ FQST L
Sbjct: 389 ----LSRARSVTRDGRVNKDDEGEDTADDAHELFQSTTL 423
>sp|Q6BMD6|M28P1_DEBHA Probable zinc metalloprotease DEHA2F06380g OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DEHA2F06380g PE=3 SV=2
Length = 1016
Score = 31.6 bits (70), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 29 GNVHGRVEGLNASAQALLIGSHLDTVVDA-GIFDGSLGIITAISALKVLKSTGKLGKLKR 87
N+ R+ G ++S ALL+ +H D+V + G+ D +GI + + L S G + +
Sbjct: 170 NNLLVRINGSDSSLPALLVSAHFDSVPSSFGVTDDGMGIASLLGILNYYSSDG----IDQ 225
Query: 88 PVE--VIAFSDEE 98
P+ ++ F++ E
Sbjct: 226 PMRTIILNFNNNE 238
>sp|Q851L6|ILL4_ORYSJ IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sativa subsp.
japonica GN=ILL4 PE=2 SV=1
Length = 414
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 27/136 (19%)
Query: 176 FPLGVVQG-----IAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHP 230
P GVV +AG R T+ G GHA +++ DP+ AA+ ++ L+++
Sbjct: 174 LPAGVVGSRPGPFLAGSARFTATITGKGGHAAEPHLAV--DPIVAASSAVLSLQQIVARE 231
Query: 231 KDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETV 290
+ L V +V I A NVIP VT LR++ G
Sbjct: 232 TNPL---------------QGAVVSVTTIKGG-EAFNVIPESVTLGGTLRSMTTDG---- 271
Query: 291 LYELSNQLYQICEKRS 306
L L N++ ++ E ++
Sbjct: 272 LSYLMNRIREVIEGQA 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,957,054
Number of Sequences: 539616
Number of extensions: 5185964
Number of successful extensions: 14525
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 14478
Number of HSP's gapped (non-prelim): 45
length of query: 366
length of database: 191,569,459
effective HSP length: 119
effective length of query: 247
effective length of database: 127,355,155
effective search space: 31456723285
effective search space used: 31456723285
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)