Query 017774
Match_columns 366
No_of_seqs 158 out of 1884
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 03:18:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017774.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017774hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR03176 AllC allantoate amid 100.0 2.4E-53 5.1E-58 409.8 40.5 339 1-364 28-374 (406)
2 PRK13590 putative bifunctional 100.0 1.1E-50 2.4E-55 406.8 41.4 340 1-363 209-556 (591)
3 PRK12891 allantoate amidohydro 100.0 2E-50 4.3E-55 391.4 40.3 338 1-364 35-380 (414)
4 PRK13799 unknown domain/N-carb 100.0 1.8E-50 3.8E-55 404.9 40.2 342 1-363 209-558 (591)
5 TIGR01879 hydantase amidase, h 100.0 3.4E-49 7.4E-54 381.4 40.8 339 1-363 26-372 (401)
6 PRK12892 allantoate amidohydro 100.0 1.2E-46 2.5E-51 365.5 41.1 337 1-362 34-379 (412)
7 PRK12890 allantoate amidohydro 100.0 1.1E-45 2.4E-50 358.7 40.3 340 1-362 33-380 (414)
8 PRK12893 allantoate amidohydro 100.0 1.9E-45 4.2E-50 356.9 40.5 335 1-362 35-378 (412)
9 PRK09290 allantoate amidohydro 100.0 1.4E-44 3E-49 350.8 40.6 341 1-363 32-380 (413)
10 COG1473 AbgB Metal-dependent a 100.0 1.5E-40 3.3E-45 313.5 33.1 296 1-364 27-355 (392)
11 PLN02693 IAA-amino acid hydrol 100.0 2.9E-40 6.3E-45 320.8 33.8 295 1-364 62-387 (437)
12 PLN02280 IAA-amino acid hydrol 100.0 6.2E-39 1.3E-43 313.5 34.9 297 1-363 112-438 (478)
13 TIGR01891 amidohydrolases amid 100.0 1.2E-38 2.5E-43 304.4 33.9 299 1-364 14-340 (363)
14 PRK07338 hypothetical protein; 100.0 2.9E-38 6.2E-43 305.8 30.6 277 5-356 39-362 (402)
15 PRK08588 succinyl-diaminopimel 100.0 6.8E-38 1.5E-42 300.7 30.6 285 1-356 17-340 (377)
16 PRK06915 acetylornithine deace 100.0 4.7E-38 1E-42 306.1 29.2 294 1-360 32-385 (422)
17 TIGR01883 PepT-like peptidase 100.0 6.3E-38 1.4E-42 299.2 28.4 284 1-361 15-334 (361)
18 TIGR01910 DapE-ArgE acetylorni 100.0 2.6E-37 5.6E-42 296.4 26.2 292 2-358 17-350 (375)
19 PRK06133 glutamate carboxypept 100.0 1.8E-36 3.9E-41 293.5 31.7 280 5-360 59-374 (410)
20 PRK13013 succinyl-diaminopimel 100.0 1.3E-36 2.8E-41 296.5 30.4 302 4-362 35-391 (427)
21 PRK06837 acetylornithine deace 100.0 8.5E-37 1.8E-41 297.4 29.1 297 1-361 35-391 (427)
22 PRK13381 peptidase T; Provisio 100.0 2.5E-36 5.5E-41 292.2 32.0 281 3-361 28-373 (404)
23 PRK07473 carboxypeptidase; Pro 100.0 4.8E-36 1E-40 287.1 30.8 277 6-360 34-344 (376)
24 PRK13009 succinyl-diaminopimel 100.0 1.3E-35 2.9E-40 284.7 32.3 291 1-361 17-343 (375)
25 PRK00466 acetyl-lysine deacety 100.0 3.9E-36 8.5E-41 285.1 27.3 267 2-362 26-312 (346)
26 TIGR01246 dapE_proteo succinyl 100.0 1.9E-35 4.1E-40 283.1 32.3 291 1-361 14-340 (370)
27 PRK13983 diaminopimelate amino 100.0 1.2E-35 2.7E-40 287.3 28.7 294 4-357 28-367 (400)
28 TIGR01892 AcOrn-deacetyl acety 100.0 2.3E-35 5E-40 281.9 29.7 279 5-358 17-334 (364)
29 PRK07906 hypothetical protein; 100.0 7.7E-36 1.7E-40 290.8 25.8 305 3-361 22-388 (426)
30 PRK08652 acetylornithine deace 100.0 2E-35 4.4E-40 280.5 27.4 273 1-361 17-313 (347)
31 PRK09133 hypothetical protein; 100.0 1.8E-35 4E-40 291.6 28.1 298 3-356 56-429 (472)
32 PRK05469 peptidase T; Provisio 100.0 6.7E-35 1.5E-39 282.6 31.3 281 3-361 29-375 (408)
33 PRK05111 acetylornithine deace 100.0 3.3E-35 7.1E-40 282.7 28.7 282 5-361 31-350 (383)
34 TIGR01880 Ac-peptdase-euk N-ac 100.0 2.7E-35 5.8E-40 284.8 27.1 298 4-361 29-364 (400)
35 PRK07522 acetylornithine deace 100.0 3.3E-35 7.2E-40 282.9 26.6 288 2-358 20-350 (385)
36 PRK08651 succinyl-diaminopimel 100.0 1.1E-34 2.4E-39 280.0 27.4 285 3-357 26-356 (394)
37 TIGR01882 peptidase-T peptidas 100.0 1.7E-34 3.8E-39 279.5 26.8 281 2-361 30-377 (410)
38 TIGR01900 dapE-gram_pos succin 100.0 8.5E-34 1.8E-38 271.4 29.5 283 2-357 12-357 (373)
39 PRK08596 acetylornithine deace 100.0 9E-34 2E-38 275.6 29.4 288 3-357 33-381 (421)
40 PRK04443 acetyl-lysine deacety 100.0 8.4E-34 1.8E-38 269.3 27.3 272 1-357 21-314 (348)
41 PRK13004 peptidase; Reviewed 100.0 9.5E-34 2.1E-38 273.8 26.9 285 1-358 30-362 (399)
42 PRK13007 succinyl-diaminopimel 100.0 3.7E-33 8.1E-38 265.5 28.7 275 1-357 22-320 (352)
43 PRK06446 hypothetical protein; 100.0 3.6E-33 7.9E-38 272.5 28.5 293 6-356 25-395 (436)
44 PRK08262 hypothetical protein; 100.0 2.4E-33 5.3E-38 277.5 27.4 304 7-361 74-447 (486)
45 TIGR03320 ygeY M20/DapE family 100.0 3.5E-33 7.7E-38 269.5 27.8 284 1-361 28-362 (395)
46 TIGR03526 selenium_YgeY putati 100.0 6.2E-33 1.3E-37 267.8 27.9 284 1-361 28-362 (395)
47 TIGR01902 dapE-lys-deAc N-acet 100.0 7.2E-33 1.6E-37 261.8 26.6 269 1-362 12-303 (336)
48 PRK08201 hypothetical protein; 100.0 9.8E-33 2.1E-37 271.1 27.7 300 3-357 37-418 (456)
49 COG0624 ArgE Acetylornithine d 100.0 1.2E-32 2.7E-37 267.0 27.3 300 3-363 31-377 (409)
50 KOG2275 Aminoacylase ACY1 and 100.0 5.8E-33 1.3E-37 254.5 22.9 299 7-363 49-386 (420)
51 PRK08737 acetylornithine deace 100.0 3E-32 6.4E-37 259.6 27.6 268 4-357 28-330 (364)
52 PRK09104 hypothetical protein; 100.0 1.2E-31 2.5E-36 264.0 28.8 303 5-360 42-429 (464)
53 PRK07907 hypothetical protein; 100.0 2.6E-31 5.7E-36 260.5 29.2 292 4-351 42-402 (449)
54 PRK07318 dipeptidase PepV; Rev 100.0 6.2E-31 1.3E-35 258.8 24.6 321 4-355 44-428 (466)
55 PRK07079 hypothetical protein; 100.0 3.5E-30 7.5E-35 253.8 29.9 299 4-356 38-418 (469)
56 TIGR01886 dipeptidase dipeptid 100.0 1.2E-29 2.5E-34 249.2 29.0 318 3-356 42-429 (466)
57 TIGR01893 aa-his-dipept aminoa 100.0 1E-29 2.3E-34 250.7 27.7 233 1-302 19-285 (477)
58 PRK07205 hypothetical protein; 100.0 2E-28 4.3E-33 239.8 28.2 296 6-348 41-398 (444)
59 PRK15026 aminoacyl-histidine d 100.0 1.7E-28 3.7E-33 240.7 27.4 221 1-299 25-288 (485)
60 PRK06156 hypothetical protein; 100.0 4E-28 8.6E-33 241.4 28.5 325 6-361 75-480 (520)
61 TIGR01887 dipeptidaselike dipe 100.0 4.6E-27 1E-31 229.3 27.6 308 4-360 32-415 (447)
62 PRK08554 peptidase; Reviewed 99.9 3.8E-26 8.2E-31 222.5 21.3 285 4-357 25-403 (438)
63 KOG2276 Metalloexopeptidases [ 99.8 2.7E-18 5.8E-23 156.9 21.4 277 3-328 39-406 (473)
64 COG2195 PepD Di- and tripeptid 99.7 1.3E-17 2.8E-22 158.1 12.6 285 2-363 21-384 (414)
65 PF07687 M20_dimer: Peptidase 99.7 4.8E-17 1E-21 128.5 12.0 110 182-304 1-110 (111)
66 COG4187 RocB Arginine degradat 99.6 3.9E-15 8.5E-20 137.5 13.4 242 2-300 26-324 (553)
67 PRK10199 alkaline phosphatase 99.6 2.5E-14 5.3E-19 132.6 12.3 102 2-114 51-187 (346)
68 TIGR03106 trio_M42_hydro hydro 99.3 2.5E-11 5.5E-16 114.1 11.5 98 1-101 18-221 (343)
69 COG1363 FrvX Cellulase M and r 99.2 8.3E-11 1.8E-15 109.5 10.8 103 1-113 17-223 (355)
70 TIGR03107 glu_aminopep glutamy 99.2 1.5E-10 3.3E-15 108.9 10.9 104 1-113 13-221 (350)
71 PRK09961 exoaminopeptidase; Pr 99.1 2.8E-10 6E-15 107.4 11.1 102 1-113 15-209 (344)
72 PF01546 Peptidase_M20: Peptid 99.0 5.4E-10 1.2E-14 96.4 7.4 62 46-113 1-82 (189)
73 PRK09864 putative peptidase; P 99.0 2.8E-09 6E-14 100.2 11.4 99 1-113 15-216 (356)
74 PF04389 Peptidase_M28: Peptid 98.4 3.6E-07 7.9E-12 78.2 5.9 64 44-114 2-72 (179)
75 KOG2194 Aminopeptidases of the 98.3 2.3E-06 5E-11 86.9 9.5 107 4-117 79-212 (834)
76 PF05343 Peptidase_M42: M42 gl 98.2 2.9E-06 6.4E-11 78.2 5.9 45 60-113 133-177 (292)
77 COG2234 Iap Predicted aminopep 97.4 0.00051 1.1E-08 67.3 7.6 65 42-115 208-273 (435)
78 KOG3946 Glutaminyl cyclase [Po 97.2 0.0016 3.5E-08 58.0 8.5 112 2-115 68-200 (338)
79 KOG2195 Transferrin receptor a 97.2 0.0011 2.5E-08 67.6 7.7 78 28-114 338-419 (702)
80 PF05450 Nicastrin: Nicastrin; 95.4 0.056 1.2E-06 48.2 7.2 67 43-115 1-74 (234)
81 KOG2526 Predicted aminopeptida 90.3 1.7 3.7E-05 41.6 8.6 99 10-113 165-286 (555)
82 COG4882 Predicted aminopeptida 89.1 1.1 2.5E-05 41.8 6.3 77 30-116 180-260 (486)
83 cd00433 Peptidase_M17 Cytosol 88.6 4.5 9.8E-05 40.0 10.6 89 7-100 175-297 (468)
84 TIGR01893 aa-his-dipept aminoa 88.4 1 2.2E-05 44.7 6.2 94 250-354 336-437 (477)
85 PF00883 Peptidase_M17: Cytoso 88.3 5.4 0.00012 37.1 10.2 90 7-100 19-142 (311)
86 PRK00913 multifunctional amino 84.0 11 0.00025 37.3 10.6 89 7-100 192-311 (483)
87 COG0260 PepB Leucyl aminopepti 75.3 30 0.00065 34.3 10.4 66 31-100 234-310 (485)
88 PTZ00412 leucyl aminopeptidase 74.4 33 0.00072 34.5 10.4 89 7-100 233-356 (569)
89 PRK15026 aminoacyl-histidine d 67.2 23 0.0005 35.3 7.8 100 251-361 343-452 (485)
90 TIGR03107 glu_aminopep glutamy 66.9 6.4 0.00014 37.4 3.6 90 264-363 219-314 (350)
91 PRK02256 putative aminopeptida 61.4 13 0.00029 36.7 4.8 40 56-101 255-294 (462)
92 PF09940 DUF2172: Domain of un 56.4 39 0.00084 32.2 6.7 76 21-113 104-185 (386)
93 TIGR02159 PA_CoA_Oxy4 phenylac 52.3 68 0.0015 26.3 6.8 69 267-336 21-92 (146)
94 PF04114 Gaa1: Gaa1-like, GPI 51.7 53 0.0011 33.0 7.3 71 30-114 5-76 (504)
95 PRK09864 putative peptidase; P 50.4 23 0.00051 33.7 4.3 94 264-363 214-314 (356)
96 PF05343 Peptidase_M42: M42 gl 49.4 16 0.00034 33.8 3.0 50 315-364 221-274 (292)
97 PF01546 Peptidase_M20: Peptid 47.7 17 0.00036 30.5 2.8 44 317-360 112-158 (189)
98 KOG2597 Predicted aminopeptida 47.0 1.4E+02 0.003 29.9 9.0 88 7-100 210-332 (513)
99 PRK05015 aminopeptidase B; Pro 44.9 2.3E+02 0.0049 27.7 10.0 33 64-100 216-248 (424)
100 PRK09961 exoaminopeptidase; Pr 44.6 23 0.00049 33.6 3.3 90 266-362 209-305 (344)
101 COG1363 FrvX Cellulase M and r 44.1 36 0.00078 32.4 4.5 92 264-363 221-319 (355)
102 KOG3566 Glycosylphosphatidylin 42.9 1.4E+02 0.003 30.3 8.4 88 10-113 92-191 (617)
103 TIGR03106 trio_M42_hydro hydro 37.9 44 0.00095 31.7 4.1 49 315-363 264-316 (343)
104 TIGR03406 FeS_long_SufT probab 37.3 2.4E+02 0.0052 23.9 8.0 29 272-300 114-142 (174)
105 PRK02813 putative aminopeptida 33.1 1.1E+02 0.0023 30.1 6.0 53 2-54 18-88 (428)
106 PRK06156 hypothetical protein; 29.9 1.3E+02 0.0028 30.2 6.3 25 253-278 240-264 (520)
107 PF05411 Peptidase_C32: Equine 29.0 1.1E+02 0.0023 24.3 4.1 48 10-57 49-108 (127)
108 PF03991 Prion_octapep: Copper 27.4 33 0.00071 13.4 0.6 6 55-60 1-6 (8)
109 COG4635 HemG Flavodoxin [Energ 27.1 60 0.0013 27.1 2.6 25 2-26 11-35 (175)
110 PF06675 DUF1177: Protein of u 27.0 3.1E+02 0.0068 24.7 7.1 61 31-93 15-87 (276)
111 COG1362 LAP4 Aspartyl aminopep 26.8 1.6E+02 0.0035 28.6 5.8 53 2-54 20-90 (437)
112 PRK02813 putative aminopeptida 26.7 68 0.0015 31.4 3.5 38 57-101 230-267 (428)
113 PTZ00371 aspartyl aminopeptida 25.8 1.8E+02 0.0038 29.0 6.2 53 2-54 19-90 (465)
114 PF01726 LexA_DNA_bind: LexA D 25.8 79 0.0017 21.9 2.7 24 1-24 4-27 (65)
115 COG4310 Uncharacterized protei 22.9 2.8E+02 0.0061 25.9 6.3 73 16-96 148-226 (435)
116 PTZ00371 aspartyl aminopeptida 22.5 1.2E+02 0.0026 30.2 4.3 44 56-101 246-290 (465)
117 PF09650 PHA_gran_rgn: Putativ 21.6 1.6E+02 0.0036 21.6 3.9 31 283-313 7-37 (87)
118 smart00853 MutL_C MutL C termi 20.1 2.2E+02 0.0048 22.3 4.8 26 1-26 61-86 (136)
No 1
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=100.00 E-value=2.4e-53 Score=409.81 Aligned_cols=339 Identities=32% Similarity=0.485 Sum_probs=296.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcC
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~ 80 (366)
+|.++.++.+|+.+||+++|+++++|..||++++++|.+++.|+|++.+||||||.||..|++.|++++|++++.|++.+
T Consensus 28 ~s~~~~~a~~~~~~~~~~~Gl~v~~D~~gN~~~~~~g~~~~~~~i~~gsHlDtv~~gG~~dg~~Gv~~~le~~~~l~~~~ 107 (406)
T TIGR03176 28 YSPEWLAAQQQFKKRMAESGLETRFDDVGNLYGRLVGTEFPEETILTGSHIDTVVNGGNLDGQFGALAAWLAVDYLKEKY 107 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEecCCCCCCCeEEEeccccCCCCCCccCchhhHHHHHHHHHHHHHcC
Confidence 68999999999999999999999999999999999998877899999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEeccccCcccCCCCcchHHhhccccccc-ccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccce
Q 017774 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSA-LRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (366)
Q Consensus 81 ~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~-~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a 159 (366)
+ +++++|.++++++||.++|++++.||+.+...+..+. +...|.+|+++.++|.+.|++++.. ....+.+.+
T Consensus 108 ~--~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~-----~~~~~~~~~ 180 (406)
T TIGR03176 108 G--APLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDVRTIEDAKGIKFVDAMHACGFDLRKA-----PTVRDDIKA 180 (406)
T ss_pred C--CCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHHHhCcCCCCCCHHHHHHHcCCCcccc-----cccccccce
Confidence 8 9999999999999999999999999999997655443 5567999999999999999976521 112346789
Q ss_pred eeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 017774 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (366)
Q Consensus 160 ~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (366)
|+++|+|+|++++..+.+.+++.+.+|..+++|+++|+++|+|.+|+..+.||+.++++++..++.+..+
T Consensus 181 ~~elHieqG~~Le~~g~~igiv~~~~G~~~~~v~v~GkaaHag~~p~~~r~dAi~aaa~~i~~l~~~~~~---------- 250 (406)
T TIGR03176 181 FVELHIEQGCVLESEGQSIGVVNAIVGQRRYTVNLKGEANHAGTTPMSYRRDTVYAFSRICTQSIERAKE---------- 250 (406)
T ss_pred EEEEEECCCcchHHCCCeEEEEeecccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHh----------
Confidence 9999999999999999999999999999999999999999999977334599999999999999876542
Q ss_pred CCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----
Q 017774 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK----- 314 (366)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~----- 314 (366)
.. .+.++|++.|+++|+..|+||++|++++|+|+.+.++.+++.++|++.+++++..+++++++...
T Consensus 251 -------~~-~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~~i~~ia~~~g~~~ei~~~~~~~p 322 (406)
T TIGR03176 251 -------IG-DPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELENDMKAIADEMDITIDIDLWMDEAP 322 (406)
T ss_pred -------cC-CCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCC
Confidence 11 35689999999647999999999999999999999999999999999999999888998887642
Q ss_pred --ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeCCC
Q 017774 315 --LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 364 (366)
Q Consensus 315 --~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~~~ 364 (366)
..+.+.+.++++..+.+......+++||+|+++|++.+|++++|+|+.++
T Consensus 323 ~~~d~~lv~~l~~a~~~~~~~~~~~~sggg~Da~~~~~~vP~~~ifgp~~~g 374 (406)
T TIGR03176 323 VPMNKEIVAIIEQLAKAEKLNYRLMHSGAGHDAQIFAPRVPTAMIFVPSIGG 374 (406)
T ss_pred CCCCHHHHHHHHHHHHHcCCCceecCcccHHHHHHHHHHCCEEEEEEeCCCC
Confidence 45667777777765544334445678999999999999999999998643
No 2
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=100.00 E-value=1.1e-50 Score=406.75 Aligned_cols=340 Identities=36% Similarity=0.590 Sum_probs=294.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCC-EEEEcCcCCEEEEecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhc
Q 017774 1 MSPASVRAGNLIRQWMEDAGL-RTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST 79 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~-~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~ 79 (366)
+|.++.++++||.+||+++|+ ++++|..||++++++|.+++.|+|++.|||||||.||..|+++|++++|++++.|++.
T Consensus 209 ~s~~~~~~~~~l~~~~~~~Gl~~v~~D~~GNl~~~~~g~~~~~~~v~~gsHlDTV~~gG~~DG~~Gv~a~lea~~~l~~~ 288 (591)
T PRK13590 209 LTDAHRACAQQISHWMRDCGFDEVHIDAVGNVVGRYKGSTPQAKRLLTGSHYDTVRNGGKYDGRLGIFVPMACVRELHRQ 288 (591)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCeeeECCCCCEEEEecCCCCCCCeEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHc
Confidence 588999999999999999999 9999999999999998766669999999999999999999999999999999999999
Q ss_pred CCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccce
Q 017774 80 GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (366)
Q Consensus 80 ~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a 159 (366)
++ +++++|.|+++++||+++|+.++.||+.+...+....+...|.+|+++.++|...||.+.. +.+....++.+.+
T Consensus 289 ~~--~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~g~~~~~al~~~g~~~~~--~~~~~~~~~~~~a 364 (591)
T PRK13590 289 GR--RLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFDPAWLDQKDADGITMREAMQHAGLCIDD--IPKLRRDPARYLG 364 (591)
T ss_pred CC--CCCCCeEEEEecCCccccCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhh--ccccccCCCCccE
Confidence 98 8889999999999999999999999999887555444555688999999999999996541 2222233567889
Q ss_pred eeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 017774 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (366)
Q Consensus 160 ~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (366)
|+++|+|||++++..+.+.+++++.+|..+++|+++|+++|+|.+||..+.||+..+++++..++.....
T Consensus 365 ~~ElHiEqg~~Le~~~~~~gvV~~~~G~~~~~v~v~GkaaHag~~P~~~r~dAi~aaa~~i~~l~~~~~~---------- 434 (591)
T PRK13590 365 FVEVHIEQGPVLNELDLPLGIVTSINGSVRYVGEMIGMASHAGTTPMDRRRDAAAAVAELALYVEQRAAQ---------- 434 (591)
T ss_pred EEEEEeCCCHHHHHCCCceEEEeeeeccEEEEEEEEeECCCCCCCCchhcccHHHHHHHHHHHHHHHHhc----------
Confidence 9999999999999999999999999999999999999999999878545799999999999999876432
Q ss_pred CCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----
Q 017774 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK----- 314 (366)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~----- 314 (366)
. ..++++++.|++.|+..|+||++|++++|+|+.+.++.+.+.+.|++.+++++..+++++++...
T Consensus 435 --------~-~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v~~~i~~~i~~ia~~~g~~vei~~~~~~~~ 505 (591)
T PRK13590 435 --------D-GDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAMVADVLAELEAICERRGLRYTLEETMRAAA 505 (591)
T ss_pred --------C-CCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCC
Confidence 1 23578999998546799999999999999999999999999999999999999888988887654
Q ss_pred --ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeCC
Q 017774 315 --LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 363 (366)
Q Consensus 315 --~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~~ 363 (366)
.+..+.+.++++..+.+.....++++||+|+++|++.+|++++|+|+..
T Consensus 506 ~~~d~~lv~~~~~aa~~~G~~~~~~~sggg~Da~~~a~~~p~~mifgpg~~ 556 (591)
T PRK13590 506 APSAPAWQQRWEAAVAALGLPLFRMPSGAGHDAMKLHEIMPQAMLFVRGEN 556 (591)
T ss_pred cCCCHHHHHHHHHHHHHcCCCcccCCcchhHHHHHHHHHCCEEEEEEeeCC
Confidence 4566777777776655555445678899999999999999999998853
No 3
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2e-50 Score=391.43 Aligned_cols=338 Identities=31% Similarity=0.492 Sum_probs=287.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcC
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~ 80 (366)
+|++|.++++||.++|+++|++++++..+|++++++|.+++.|+|+|+|||||||.+|..|||+|++++|+++++|++.+
T Consensus 35 ~~~~e~~~~~~l~~~l~~~G~~v~~~~~gNl~a~~~g~~~~~~~l~~~~H~DtVp~gg~~D~k~Gv~a~l~a~~~l~~~~ 114 (414)
T PRK12891 35 LTDGDREARDLFVAWARDAGCTVRVDAMGNLFARRAGRDPDAAPVMTGSHADSQPTGGRYDGIYGVLGGLEVVRALNDAG 114 (414)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEecCCCCCCCeEEEEecccCCCCCccccchhhHHHHHHHHHHHHHcC
Confidence 58899999999999999999999999999999999886544599999999999999999999999999999999999999
Q ss_pred CCCCCCCCEEEEEeccccCcccCCCCcchHHhhccccccc-ccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccce
Q 017774 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSA-LRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (366)
Q Consensus 81 ~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~-~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a 159 (366)
+ +++++|.|++++|||.++|+.++.|++.+...+..+. +...|.+|..+.+.+.+.|+..+.. ..++...+
T Consensus 115 ~--~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~~ 186 (414)
T PRK12891 115 I--ETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGAEP------VGGYPVHA 186 (414)
T ss_pred C--CCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCcccc------cccCCCCE
Confidence 8 8999999999999999989888999998876555443 3446788999999999988864321 12345668
Q ss_pred eeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 017774 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (366)
Q Consensus 160 ~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (366)
++++|+|++++++..+.+.+++.+++|..|++|+++|+++|+|..|+..+.|||..+++++..|+.+....
T Consensus 187 ~~e~h~e~g~vle~~~~~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~~--------- 257 (414)
T PRK12891 187 AYELHIEQGAILERAGKTIGVVTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGRRD--------- 257 (414)
T ss_pred EEEEEeCCCHHHHHCCCcEEEEeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---------
Confidence 89999999999999988888999999999999999999999996682358999999999999998875421
Q ss_pred CCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----
Q 017774 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK----- 314 (366)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~----- 314 (366)
. .+.++|++.|++++.+.|+||++|++++|+|+.|.++.+++.++|++++++++..+++++++...
T Consensus 258 --------~-~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (414)
T PRK12891 258 --------A-PDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRAELARIADETGLRADIEQIFGYAP 328 (414)
T ss_pred --------C-CCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEEecCCC
Confidence 1 25699999999933699999999999999999999999999999999999988888888776543
Q ss_pred --ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeCCC
Q 017774 315 --LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 364 (366)
Q Consensus 315 --~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~~~ 364 (366)
..+.+.+.++++..+.+.+.....++||+|+++++..+|++++|+|+...
T Consensus 329 ~~~d~~lv~~l~~a~~~~G~~~~~~~~~ggtDa~~~~~giPt~~~~gp~~~~ 380 (414)
T PRK12891 329 APFAPGCIDAVRDAARALGLSHMDIVSGAGHDACFAARGAPTGMIFVPCVDG 380 (414)
T ss_pred cCCCHHHHHHHHHHHHHcCCCceecCCcchHHHHHHHhhCCEEEEEEcCCCC
Confidence 35677777777765555444344678999999988789999999887643
No 4
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=100.00 E-value=1.8e-50 Score=404.92 Aligned_cols=342 Identities=38% Similarity=0.607 Sum_probs=296.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEcCcCCEEEEecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhc
Q 017774 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKST 79 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~ 79 (366)
+|.++.++++|+.+||+++|++ +++|..||++++++|.+++.|+|++.||+||||.||..|+-.|++++|++++.|++.
T Consensus 209 ~s~~~~~~~~~~~~~~~~~Gl~~v~~D~~gNv~~~~~g~~~~~p~v~~gSHlDTV~~gG~~DG~~Gv~a~l~~~~~l~~~ 288 (591)
T PRK13799 209 LSDAHRACANQISDWMRDAGFDEVEIDAVGNVVGRYKAADDDAKTLITGSHYDTVRNGGKYDGREGIFLAIACVKELHEQ 288 (591)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCeEeECCCCCEEEEcCCCCCCCCeEEEeccccccCCCCccccHHHHHHHHHHHHHHHHc
Confidence 6889999999999999999998 999999999999998766679999999999999999999999999999999999999
Q ss_pred CCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccce
Q 017774 80 GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (366)
Q Consensus 80 ~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a 159 (366)
++ +++++|.|+++++||+.+|+.++.||+.+...+..+.+...|.+|+++.+.+...|+.++. +.+....++.+.+
T Consensus 289 ~~--~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~~~~~~~~~d~~G~~~~~~l~~~g~~~~~--~~~~~~~~~~~~a 364 (591)
T PRK13799 289 GE--RLPFHFEVIAFAEEEGQRFKATFLGSGALIGDFNMELLDIKDADGISLREAIQHAGHCIDA--IPKIARDPADVLG 364 (591)
T ss_pred CC--CCCCCeEEEEecCCCccCCCccccchHHHhCCChHHHHhccCCCCCCHHHHHHHcCCChhh--ccccccCCCCccE
Confidence 98 9999999999999999999999999999987555555555788999999999999986542 1111122347889
Q ss_pred eeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 017774 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (366)
Q Consensus 160 ~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (366)
|+++|+|+|++++..+.++|++++.+|..+++|+++|+++|+|.+||..+.||+.++++++..++++..+.
T Consensus 365 ~~ElHIEQgp~Le~~~~~igvV~g~~G~~~~~Itv~GkaaHag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--------- 435 (591)
T PRK13799 365 FIEVHIEQGPVLLELDIPLGIVTSIAGSARYICEFIGMASHAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--------- 435 (591)
T ss_pred EEEEEeCCCHHHHHCCCcEEEEeeeccceEEEEEEEEECCCCCCCChhhchhHHHHHHHHHHHHHHHHHhc---------
Confidence 99999999999999999999999999999999999999999998785568999999999999998875421
Q ss_pred CCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----
Q 017774 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK----- 314 (366)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~----- 314 (366)
+. ...+++++.|++.+++.|+||++|++++|+|+.+.++.+.+.++|++.+++++..++++++++..
T Consensus 436 -------~~-~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l~~~i~~~i~~ia~~~g~~~ei~~~~~~~~ 507 (591)
T PRK13799 436 -------QH-ASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAAVADILAEIAAIAARRGIEYKAELAMKAAA 507 (591)
T ss_pred -------CC-CCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEEecCCC
Confidence 11 24588999999744589999999999999999999999999999999999999888888776653
Q ss_pred --ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeCC
Q 017774 315 --LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 363 (366)
Q Consensus 315 --~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~~ 363 (366)
....+.+.++++....+.....++++||+|+++|++.+|++++|+|+++
T Consensus 508 ~~~d~~lv~~~~~a~~~~G~~~~~~~sgag~Da~~~a~~~p~amif~~~g~ 558 (591)
T PRK13799 508 APCAPELMKQLEAATDAAGVPLFELASGAGHDAMKIAEIMDQAMLFTRCGN 558 (591)
T ss_pred cCCCHHHHHHHHHHHHHcCCCceecCcchHHHHHHHHhhCCEEEEEEecCC
Confidence 3566777777766555655545567899999999999999999999765
No 5
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=100.00 E-value=3.4e-49 Score=381.42 Aligned_cols=339 Identities=37% Similarity=0.592 Sum_probs=283.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcC
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~ 80 (366)
+|++|.++++||.++|+++|+++++++.+|++++++|+.++.|+|+|+||+||||.+|..|++.|++++|++++.|++.+
T Consensus 26 ~~~~e~~~~~~l~~~~~~~G~~~~~~~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~gg~~dg~~gvaa~l~a~~~l~~~g 105 (401)
T TIGR01879 26 LSPEDREAQDLFKKRMRAAGLEVRFDEVGNLIGRKEGTEPPLEVVLSGSHIDTVVNGGNFDGQLGVLAGIEVVDALKEAY 105 (401)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEecCCcEEEEecCCCCCCCEEEEecccccCCCCCccCCHHHHHHHHHHHHHHHHcC
Confidence 58899999999999999999999999999999999876544589999999999999999999999999999999999999
Q ss_pred CCCCCCCCEEEEEeccccCcccCCCCcchHHhhccccccccc-ccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccce
Q 017774 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALR-VSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (366)
Q Consensus 81 ~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~-~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a 159 (366)
+ +++++|.|++++|||.++|+.++.|++.++.......+. ..|.+|+++.+.+.+.|.... .+. ...+..+.+
T Consensus 106 ~--~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~--~~~--~~~~~~~~~ 179 (401)
T TIGR01879 106 V--VPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLP--NQP--LRPRGDIKA 179 (401)
T ss_pred C--CCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCcc--ccc--ccccccccE
Confidence 8 899999999999999888888899999998644332232 256778999998888775321 111 111335678
Q ss_pred eeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 017774 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (366)
Q Consensus 160 ~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (366)
|+++|+|+|++++..+...+++.+++|..|++|+++|+++|++.+|+..+.||+..+++++..|+.+..+.
T Consensus 180 ~~e~Hieqg~~l~~~g~~~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~~~~--------- 250 (401)
T TIGR01879 180 YVELHIEQGPVLESNGQPIGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKAKRM--------- 250 (401)
T ss_pred EEEEEEcCCcChhhCCCeEEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc---------
Confidence 99999999999999999999999999999999999999999998673367999999999999999875431
Q ss_pred CCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----
Q 017774 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK----- 314 (366)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~----- 314 (366)
..+.+.+++.|++++...|+||++|++.+|+|+.|+++.+++.++|++.+++++..+++++++...
T Consensus 251 ---------~~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
T TIGR01879 251 ---------GDPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLENDIKAISDERDIGIDIERWMDEEP 321 (401)
T ss_pred ---------CCCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCceEEEEEeecCCC
Confidence 124578999999844789999999999999999999999999999999999888877887777543
Q ss_pred --ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeCC
Q 017774 315 --LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 363 (366)
Q Consensus 315 --~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~~ 363 (366)
..+++.+.++++..+.+......+++|+||+++|++.+|.+++|+|+..
T Consensus 322 ~~~d~~lv~~l~~a~~~~g~~~~~~~~~ggtDa~~~~~~~~~~v~fgPg~~ 372 (401)
T TIGR01879 322 VPCSEELVAALTELCERLGYNARVMVSGAGHDAQILAPIVPIGMIFIPSIN 372 (401)
T ss_pred cCCCHHHHHHHHHHHHHcCCCccccccchHHHHHHHHhhCCEEEEEecCCC
Confidence 4566777777766555544444567899999999998888889988754
No 6
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.2e-46 Score=365.53 Aligned_cols=337 Identities=36% Similarity=0.555 Sum_probs=276.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcC
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~ 80 (366)
+|++|.++++||.++|+++|++++++.++|++++++|.+++ |+|+|+||+||||.+|-.|+++|++++|++++.|++.+
T Consensus 34 ~~~~e~~~~~~l~~~l~~~G~~~~~~~~~nl~a~~~g~~~~-~~l~l~gH~DtVp~~g~~dg~~Gvaa~l~a~~~l~~~~ 112 (412)
T PRK12892 34 YSDAHVAARRRLAAWCEAAGLAVRIDGIGNVFGRLPGPGPG-PALLVGSHLDSQNLGGRYDGALGVVAGLEAARALNEHG 112 (412)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEecCCCCC-CeEEEEccccCCCCCCcccchHHHHHHHHHHHHHHHcC
Confidence 36789999999999999999999988889999999886654 89999999999999988899999999999999999999
Q ss_pred CCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccc-cccC-CCCCcHHHHHHHCCCCchhhhhhhccCCCCccc
Q 017774 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSAL-RVSD-KSGVTVLDALRENSIDIAEESLLQLKYDPASVW 158 (366)
Q Consensus 81 ~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~-~~~d-~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 158 (366)
+ +++++|.|++++|||.++|+.++.|++.++..+....+ ...+ .+++.+.+.+.+.|+.+|...+.+ |....
T Consensus 113 ~--~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~~~~e----p~~~~ 186 (412)
T PRK12892 113 I--ATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALAARCRSDGVPLRDALAAAGLAGRPRPAAD----RARPK 186 (412)
T ss_pred C--CCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHhCccCCCCcCHHHHHHHcCCChhhccccc----ccCcc
Confidence 7 88999999999999997677667899999854332211 1111 245666777777888766544332 44566
Q ss_pred eeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 017774 159 GYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDG 238 (366)
Q Consensus 159 a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~ 238 (366)
+++++|+++++.+++.+...+++.+++|..|++|+++|+++|++.+|++.+.|||..+++++.+|+++....
T Consensus 187 ~~~e~~~~~g~~~e~~~~~~~i~~~~kG~~~~~i~v~G~~aHa~~~p~~~g~nAi~~a~~~i~~l~~~~~~~-------- 258 (412)
T PRK12892 187 GYLEAHIEQGPVLEQAGLPVGVVTGIVGIWQYRITVTGEAGHAGTTPMALRRDAGLAAAEMIAAIDEHFPRV-------- 258 (412)
T ss_pred EEEEEEeccCHhHhhCCCcEEEEEEeccceEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc--------
Confidence 788899999999988877677889999999999999999999987672267999999999999998865421
Q ss_pred CCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee----
Q 017774 239 RSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK---- 314 (366)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~---- 314 (366)
. .+++++++.|++++.+.|+||++|++++|+|+.|.++.+++.++|++++++++..+++++++...
T Consensus 259 ---------~-~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~~~~~~~~e~~~~~~~~ 328 (412)
T PRK12892 259 ---------C-GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEALCREIARRRGCRVSVDRIAEYA 328 (412)
T ss_pred ---------C-CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEEecCC
Confidence 1 24799999999834799999999999999999999999999999999999988888888777543
Q ss_pred ---ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeC
Q 017774 315 ---LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLN 362 (366)
Q Consensus 315 ---~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~ 362 (366)
....+.+.+++++.+.+.++....++|++|+++|++.+|++++|+|+.
T Consensus 329 ~~~~d~~lv~~~~~a~~~~g~~~~~~~~~g~tDa~~~~~~ip~~~~~gp~~ 379 (412)
T PRK12892 329 PAPCDAALVDALRAAAEAAGGPYLEMPSGAGHDAQNMARIAPSAMLFVPSK 379 (412)
T ss_pred CcCCCHHHHHHHHHHHHHcCCCccccCcchHHHHHHHHhHCCEEEEEeccC
Confidence 345666666666655444433445789999999998899988888764
No 7
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.1e-45 Score=358.68 Aligned_cols=340 Identities=40% Similarity=0.593 Sum_probs=273.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcC
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~ 80 (366)
.|++|.++++||.++|+++||+++++..+|++++++|+.++.|+|+|+|||||||.+|..|||+|++++|++++.|++.+
T Consensus 33 ~~~~e~~~~~~l~~~l~~~G~~~~~~~~~nlia~~~g~~~~~~~l~~~~H~DtVp~~g~~D~~~g~aa~l~a~~~l~~~~ 112 (414)
T PRK12890 33 LSDEERAARALLAAWMRAAGLEVRRDAAGNLFGRLPGRDPDLPPLMTGSHLDTVPNGGRYDGILGVLAGLEVVAALREAG 112 (414)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEcCCCcEEEEeCCCCCCCCEEEEeCcccCCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 37899999999999999999999988889999999876444589999999999999999999999999999999999988
Q ss_pred CCCCCCCCEEEEEeccccCcccCCCCcchHHhhccccccc-ccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccce
Q 017774 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSA-LRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (366)
Q Consensus 81 ~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~-~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a 159 (366)
. .++++|.|++++|||.++++..+.|++.+...+.... +...+.++..+.+.+.+.|+..+..... ...|..+.+
T Consensus 113 ~--~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~ep~~~~~ 188 (414)
T PRK12890 113 I--RPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIGGDPDALPGA--LRPPGAVAA 188 (414)
T ss_pred C--CCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcCCChhhcccc--ccCCCCccE
Confidence 6 7899999999999998777667789988875444222 2223445677777777778765422110 012334567
Q ss_pred eeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 017774 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (366)
Q Consensus 160 ~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (366)
++++|+++|+.++..+...+++.+++|..|++|+++|+++|+|..|++.+.|||..+++++..|+.+..+.
T Consensus 189 ~~~~h~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i~~l~~~~~~~--------- 259 (414)
T PRK12890 189 FLELHIEQGPVLEAEGLPIGVVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAELVTAMERRARAL--------- 259 (414)
T ss_pred EEEEeeCcCHHHHhCCCceEEEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHHHHHHHHHHHhc---------
Confidence 77899999888887776667888999999999999999999987572345899999999999999876431
Q ss_pred CCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----
Q 017774 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK----- 314 (366)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~----- 314 (366)
. .+.+++++.|++++.+.|+||++|++++|+|+.|.++.+++.++|++++++.+..+++++++...
T Consensus 260 -------~--~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (414)
T PRK12890 260 -------L--HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLAELEAIAAARGVRIELERLSRSEP 330 (414)
T ss_pred -------C--CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEeecCCC
Confidence 1 35788999999745899999999999999999999999999999999999888777887776543
Q ss_pred --ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeC
Q 017774 315 --LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLN 362 (366)
Q Consensus 315 --~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~ 362 (366)
..+.+.+.+.++..+.+..+....++|+||+++|++..|.+++|+|+.
T Consensus 331 ~~~~~~l~~~l~~~~~~~g~~~~~~~~~g~tDa~~~~~~gp~~~~~gp~~ 380 (414)
T PRK12890 331 VPCDPALVDAVEAAAARLGYPSRRMPSGAGHDAAAIARIGPSAMIFVPCR 380 (414)
T ss_pred cCCCHHHHHHHHHHHHHcCCCceecCCcccHHHHHHHhhCCEEEEEecCC
Confidence 346666666666654444433345679999999998889888888864
No 8
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.9e-45 Score=356.89 Aligned_cols=335 Identities=39% Similarity=0.622 Sum_probs=267.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcC
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~ 80 (366)
.|++|.++++||.++|+++|++++++..+|++++++|.++..|+|+|.||+||||.+|..|+|+|++++|+++++|++.+
T Consensus 35 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~~a~~~g~~~~~~~l~l~~H~DtVp~~g~~dgk~gvaa~l~a~~~l~~~~ 114 (412)
T PRK12893 35 LTDEDREARDLLAQWMEEAGLTVSVDAIGNLFGRRAGTDPDAPPVLIGSHLDTQPTGGRFDGALGVLAALEVVRTLNDAG 114 (412)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEeCCCCCCCCEEEEEecccCCCCCCcccchhhHHHHHHHHHHHHHcC
Confidence 37889999999999999999999988888999999875433489999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccc-cccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccce
Q 017774 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSAL-RVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (366)
Q Consensus 81 ~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~-~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a 159 (366)
. .++++|.|+|++|||.+++...+.|++.+......+.+ ...+.+++.+.+.+.+.|+.++.. ..++.+.+
T Consensus 115 ~--~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 186 (412)
T PRK12893 115 I--RTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDALARRDADGITLGEALARIGYRGTAR------VGRRAVDA 186 (412)
T ss_pred C--CCCCCeEEEEEccccccccccccccHHHHhCcCChHHHHhccCCCCCCHHHHHHHcCCCcccc------cccCCccE
Confidence 7 78999999999999987655556799988743332211 111224455555555556543210 11234667
Q ss_pred eeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 017774 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMS-MRQDPMTAAAELIVLLERLCKHPKDFLSYDG 238 (366)
Q Consensus 160 ~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~-~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~ 238 (366)
++++|+++|+.++..+....++.+++|..|++|+++|+++|+|.+| + .|.|||.++++++..|+.+..+.
T Consensus 187 ~~~~~~~~g~~~~~~~~~~~i~~~~kG~~~~~i~v~G~~aHas~~p-~~~G~NAI~~a~~~i~~l~~~~~~~-------- 257 (412)
T PRK12893 187 YLELHIEQGPVLEAEGLPIGVVTGIQGIRWLEVTVEGQAAHAGTTP-MAMRRDALVAAARIILAVERIAAAL-------- 257 (412)
T ss_pred EEEEEeccCHHHHHCCCcEEEEeeecccEEEEEEEEEECCCcCCCc-chhccCHHHHHHHHHHHHHHHHHhc--------
Confidence 8889999988877777666788899999999999999999999757 5 79999999999999998875431
Q ss_pred CCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee----
Q 017774 239 RSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK---- 314 (366)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~---- 314 (366)
....+++++.|++++.+.|+||++|++++|+|+.|.++.+++.+.|++++++.+..+++++++...
T Consensus 258 ----------~~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~~~~~~~~v~~~~~~~~~ 327 (412)
T PRK12893 258 ----------APDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRAACAKIAAARGVQVTVETVWDFP 327 (412)
T ss_pred ----------CCCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEecCC
Confidence 125689999999845899999999999999999999999999999999999888778888776532
Q ss_pred ---ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeC
Q 017774 315 ---LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLN 362 (366)
Q Consensus 315 ---~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~ 362 (366)
....+.+.++++..+.+.+.....++|+||+++|++.+|++++|.|+.
T Consensus 328 ~~~~d~~l~~~l~~~~~~~g~~~~~~~~~g~tD~~~~~~~~p~~v~~gp~~ 378 (412)
T PRK12893 328 PVPFDPALVALVEAAAEALGLSHMRMVSGAGHDAMFLARVAPAAMIFVPCR 378 (412)
T ss_pred CcCCCHHHHHHHHHHHHHcCCCccccCCccHHHHHHHHhhCCEEEEEeecC
Confidence 345666666666554443333445779999999999899988888764
No 9
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.4e-44 Score=350.76 Aligned_cols=341 Identities=40% Similarity=0.638 Sum_probs=265.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcC
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTG 80 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~ 80 (366)
.|++|.++++||.++|+++||+++++..+|++++++|..+..|+|+|+|||||||.+|..|||+|++++|+++++|++.+
T Consensus 32 ~s~~e~~~a~~l~~~l~~~g~~~~~~~~~nl~a~~~g~~~~~~~l~l~gH~DtVp~~g~~d~k~g~aa~l~a~~~l~~~~ 111 (413)
T PRK09290 32 LSPEDLQARDLFAEWMEAAGLTVRVDAVGNLFGRLEGRDPDAPAVLTGSHLDTVPNGGRFDGPLGVLAGLEAVRTLNERG 111 (413)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCCCcEEEEecCCCCCCCEEEEecCccCCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 37899999999999999999999988889999999764323489999999999999999999999999999999999998
Q ss_pred CCCCCCCCEEEEEeccccCcccCCCCcchHHhhccccccccc-ccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccce
Q 017774 81 KLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALR-VSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWG 159 (366)
Q Consensus 81 ~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~-~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a 159 (366)
. .++++|.|++++|||.++++..+.|++.+.+.+..+.+. ..|.++..+.+.+.+.|++++...+. .-.|..+.+
T Consensus 112 ~--~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~--~~ept~~~~ 187 (413)
T PRK09290 112 I--RPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDALALRDADGVSFAEALAAIGYDGDEAVGA--ARARRDIKA 187 (413)
T ss_pred C--CCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHHHhccCCCCCCHHHHHHHcCCChhhcccc--ccCCCCccE
Confidence 7 789999999999999864444457899887543322111 12445666666666677765421110 001333445
Q ss_pred eeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 017774 160 YIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGR 239 (366)
Q Consensus 160 ~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~ 239 (366)
++.+|++.+.++++.+....++.+++|..|++|+++|+++|+|..|.+.|.|||..+++++..|+.+..+.
T Consensus 188 ~~~~~~~~~~~~e~~~~~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~NAI~~~~~~i~~l~~l~~~~--------- 258 (413)
T PRK09290 188 FVELHIEQGPVLEAEGLPIGVVTGIVGQRRYRVTFTGEANHAGTTPMALRRDALLAAAEIILAVERIAAAH--------- 258 (413)
T ss_pred EEEEEeccCHHHHHCCCcEEEEeeeeccEEEEEEEEEECCCCCCCCchhccCHHHHHHHHHHHHHHHHHhc---------
Confidence 56678887777788776656788999999999999999999985362378999999999999998765421
Q ss_pred CCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----
Q 017774 240 SNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK----- 314 (366)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~----- 314 (366)
. .+.+++++.|++++...|+||++|++.+|+|+.|.++.+++.++|++++++.+..+++++++...
T Consensus 259 -------~--~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~~~~~~~~~~~~~~e~~~~~~~~~ 329 (413)
T PRK09290 259 -------G--PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRAAAEAIAARRGVEVEIELISRRPP 329 (413)
T ss_pred -------C--CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCC
Confidence 1 24688999999735899999999999999999999999999999999999887777887776543
Q ss_pred --ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeCC
Q 017774 315 --LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 363 (366)
Q Consensus 315 --~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~~ 363 (366)
..+.+.+.++++..+.+.......++|++|+++|++.+|++++|+|...
T Consensus 330 ~~~d~~lv~~l~~a~~~~g~~~~~~~~~g~tDa~~~~~~iP~~~~~gp~~~ 380 (413)
T PRK09290 330 VPFDPGLVAALEEAAERLGLSYRRLPSGAGHDAQILAAVVPTAMIFVPSVG 380 (413)
T ss_pred ccCCHHHHHHHHHHHHHcCCCccccCCccchHHHHHhccCCEEEEEeccCC
Confidence 3466666666666544433333456799999999878999888888653
No 10
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=1.5e-40 Score=313.53 Aligned_cols=296 Identities=22% Similarity=0.308 Sum_probs=240.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCc-CC-EEEEecCCCCCCCeEEEecccCccc-----------------cCCCCC
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHL-GN-VHGRVEGLNASAQALLIGSHLDTVV-----------------DAGIFD 61 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~-gn-via~~~g~~~~~~~i~l~~H~D~Vp-----------------~gg~~D 61 (366)
+|++|.++++||+++|+++|+++....- +. +++++++..++ |+|.|.+.||.+| |.|+||
T Consensus 27 L~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g-~tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD 105 (392)
T COG1473 27 LGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPG-PTIALRADMDALPIQEETGLPFASKNPGVMHACGHD 105 (392)
T ss_pred cchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCC-CEEEEEeecccCccccccCCCcccCCCCCcccCCch
Confidence 6899999999999999999999432222 23 99999876654 6999999999998 669999
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCC-C
Q 017774 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS-I 140 (366)
Q Consensus 62 ~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g-~ 140 (366)
.++.++ |.++++|++..- +++++|+|+|+|+||+++ |++.+++ .| |
T Consensus 106 ~Hta~l--LgaA~~L~~~~~--~~~Gtv~~ifQPAEE~~~------Ga~~mi~-----------------------~G~~ 152 (392)
T COG1473 106 GHTAIL--LGAALALAEHKD--NLPGTVRLIFQPAEEGGG------GAKAMIE-----------------------DGVF 152 (392)
T ss_pred HHHHHH--HHHHHHHHhhhh--hCCcEEEEEecccccccc------cHHHHHh-----------------------cCCc
Confidence 998887 999999998853 789999999999999873 8777752 12 1
Q ss_pred CchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHH
Q 017774 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (366)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i 220 (366)
. .+ +|.+++ +|+.|+.+.+......|.+ ..+...++++++|+++|++. | +.++||+.+++.++
T Consensus 153 ~---------~~-vD~v~g---~H~~p~~~~g~v~~~~G~~--~aa~d~~~i~~~GkggH~a~-P-h~~~d~i~aa~~~v 215 (392)
T COG1473 153 D---------DF-VDAVFG---LHPGPGLPVGTVALRPGAL--MAAADEFEITFKGKGGHAAA-P-HLGIDALVAAAQLV 215 (392)
T ss_pred c---------cc-ccEEEE---ecCCCCCCCceEEeecccc--eeecceEEEEEEeCCcccCC-c-ccccCHHHHHHHHH
Confidence 1 22 444444 7997663333333333433 78899999999999999988 8 89999999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHH
Q 017774 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (366)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~ 300 (366)
..|+.+..+..+ |. ...+++++.+++ |.+.|+||+++++.+++|++..+..+.+.++++++++.
T Consensus 216 ~~lq~ivsr~~~--------------p~-~~~vv~vg~~~a-G~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g 279 (392)
T COG1473 216 TALQTIVSRNVD--------------PL-DSAVVTVGKIEA-GTAANVIPDSAELEGTIRTFSDEVREKLEARIERIAKG 279 (392)
T ss_pred HHHHHHHhcccC--------------Cc-cCeEEEEEEecC-CCcCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHH
Confidence 999998775321 44 367999999999 89999999999999999999999999999999999999
Q ss_pred HHHHhCceEEEEee-----------ehHHHHHHHHHHhhccC--CCCCCCCCchhhHHHHHhhhcCEEEEEEeeCCC
Q 017774 301 ICEKRSVSCIVERK-----------LKSASYAALKRMTGATQ--HEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 364 (366)
Q Consensus 301 ~~~~~~~~~~v~~~-----------~~~~l~~~~~~~~g~~~--~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~~~ 364 (366)
++..+++++++.+. +.+.+.+++++..++.. ...+. .+.||+||++|++.+|.+++|+|+.+.
T Consensus 280 ~a~~~g~~~ei~~~~~~p~~~Nd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gsEDf~~~~~~~Pg~~~~lG~~~~ 355 (392)
T COG1473 280 IAAAYGAEAEIDYERGYPPVVNDPALTDLLAEAAEEVGGEEVVVVELPP-SMAGSEDFGYYLEKVPGAFFFLGTGSA 355 (392)
T ss_pred HHHHhCCeEEEEecCCCCCccCCHHHHHHHHHHHHHhccccceecccCC-CCCccchHHHHHHhCCeeEEEeecCcC
Confidence 99999999999887 45677777777776422 12221 245999999999999999999998764
No 11
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=2.9e-40 Score=320.80 Aligned_cols=295 Identities=18% Similarity=0.239 Sum_probs=221.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE-cCcCCEEEEecCCCCCCCeEEEecccCccccC---------------CCCCCHH
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWV-DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------GIFDGSL 64 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~-~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------g~~D~k~ 64 (366)
+|++|.++++||+++|+++|+++++ ....|++|++. +++ .|+|+|+|||||||.+ -++|+|+
T Consensus 62 ~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g-~~~-g~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg 139 (437)
T PLN02693 62 LGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIG-TGE-PPFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDG 139 (437)
T ss_pred CCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEEC-CCC-CCEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchH
Confidence 5899999999999999999999764 34578999984 333 4899999999999853 1568899
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchh
Q 017774 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (366)
Q Consensus 65 gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~ 144 (366)
+++++|+++++|++.+. +++++|.|+|++|||.+ .|++.+++ .|.
T Consensus 140 ~~A~~l~Aa~~L~~~~~--~~~g~V~~if~pdEE~~------~Ga~~~i~-----------------------~g~---- 184 (437)
T PLN02693 140 HVAMLLGAAKILQEHRH--HLQGTVVLIFQPAEEGL------SGAKKMRE-----------------------EGA---- 184 (437)
T ss_pred HHHHHHHHHHHHHhCcc--cCCceEEEEEEEcccch------hhHHHHHH-----------------------CCC----
Confidence 99999999999998875 67899999999999954 38887752 111
Q ss_pred hhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017774 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (366)
Q Consensus 145 ~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~ 224 (366)
+. ...+++..|.++....+......|.. .+|..+++|+++|+++|+|. | +.|.|||..+++++..|+
T Consensus 185 -------~~--~~~~iig~h~~p~~~~g~~~~~~g~~--~~G~~~~~i~v~Gk~aHaa~-P-~~G~nAI~~aa~~i~~l~ 251 (437)
T PLN02693 185 -------LK--NVEAIFGIHLSPRTPFGKAASRAGSF--MAGAGVFEAVITGKGGHAAI-P-QHTIDPVVAASSIVLSLQ 251 (437)
T ss_pred -------CC--CCCEEEEEecCCCCCCeeEEeccCcc--cccceEEEEEEEcccccCCC-C-CCCcCHHHHHHHHHHHHH
Confidence 11 12233335776542222111111222 57899999999999999998 8 899999999999999999
Q ss_pred HHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHH
Q 017774 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK 304 (366)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~ 304 (366)
.+..+... +. .+.++|++.|+| |...|+||++|++++|+|+.+.. +++.++|++++++++..
T Consensus 252 ~~~~~~~~--------------~~-~~~ti~vg~i~G-G~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~i~~~~a~~ 313 (437)
T PLN02693 252 QLVSRETD--------------PL-DSKVVTVSKVNG-GNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKEIITKQAAV 313 (437)
T ss_pred HHhcccCC--------------CC-CCcEEEEEEEEc-CCCCceECCeEEEEEEEecCCHH--HHHHHHHHHHHHHHHHH
Confidence 87543111 33 467999999999 89999999999999999999974 58999999999998878
Q ss_pred hCceEEEEee---------------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeCCC
Q 017774 305 RSVSCIVERK---------------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 364 (366)
Q Consensus 305 ~~~~~~v~~~---------------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~~~ 364 (366)
+++++++... +.+.+.+++++++|.... ....+..|++||++|++.+|++++++|+.++
T Consensus 314 ~g~~~e~~~~~~~~~~~~~~~nd~~l~~~~~~~~~~~~G~~~~-~~~~~~~gseDf~~~~~~vP~~~~~lG~~~~ 387 (437)
T PLN02693 314 HRCNASVNLTPNGREPMPPTVNNMDLYKQFKKVVRDLLGQEAF-VEAAPEMGSEDFSYFAETIPGHFSLLGMQDE 387 (437)
T ss_pred hCCcEEEEEeecCccCCCCccCCHHHHHHHHHHHHHhcCCcce-eecCCCceechHHHHHHHhhhhEEEEecCCC
Confidence 8876655431 234444444444442111 1112356999999999999999999998753
No 12
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=6.2e-39 Score=313.48 Aligned_cols=297 Identities=17% Similarity=0.219 Sum_probs=222.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc-CcCCEEEEecCCCCCCCeEEEecccCccccCC---------------CCCCHH
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVD-HLGNVHGRVEGLNASAQALLIGSHLDTVVDAG---------------IFDGSL 64 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~-~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg---------------~~D~k~ 64 (366)
++++|.++++||.++|+++|+++++. ...|+++++ |+.+ .|+|+|+|||||||.+. ++|+|+
T Consensus 112 ls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~-g~~~-~~~I~l~gh~DaVP~~e~~~w~~~p~~~G~~h~cGhd~ 189 (478)
T PLN02280 112 LAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWI-GTGG-PPFVAVRADMDALPIQEAVEWEHKSKVAGKMHACGHDA 189 (478)
T ss_pred CCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEE-CCCC-CCEEEEEEecCCCcccCCCCCCCCCCCCCeEEeCCCcH
Confidence 47899999999999999999997753 345899998 5433 38999999999999531 235566
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchh
Q 017774 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (366)
Q Consensus 65 gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~ 144 (366)
+++++|+++++|++.+. +++++|.|+|++|||.+ .|++.+++ .|.
T Consensus 190 ~~A~~l~a~~~L~~~~~--~~~g~V~~if~pdEE~g------~Ga~~li~-----------------------~g~---- 234 (478)
T PLN02280 190 HVAMLLGAAKILKSREH--LLKGTVVLLFQPAEEAG------NGAKRMIG-----------------------DGA---- 234 (478)
T ss_pred HHHHHHHHHHHHHhccc--cCCceEEEEeccccccc------chHHHHHH-----------------------CCC----
Confidence 88888999999998876 78999999999999986 38888762 111
Q ss_pred hhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017774 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (366)
Q Consensus 145 ~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~ 224 (366)
+ +.+.+++.+|+.+..+....+.+.+. ..+|..+++|+++|+++|+|. | +.|.|||.++++++..++
T Consensus 235 -------~--~~~d~~~~~h~~~~~p~g~ig~~~~~--~~~G~~~~~I~v~Gk~aHas~-P-~~G~NAI~~aa~li~~l~ 301 (478)
T PLN02280 235 -------L--DDVEAIFAVHVSHEHPTAVIGSRPGP--LLAGCGFFRAVISGKKGRAGS-P-HHSVDLILAASAAVISLQ 301 (478)
T ss_pred -------C--cCCCEEEEEecCCCCCCceeEecccc--cccceeEEEEEEECcchhcCC-c-ccCcCHHHHHHHHHHHHH
Confidence 1 11223334676322111111122222 256999999999999999998 8 899999999999999998
Q ss_pred HHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHH
Q 017774 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK 304 (366)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~ 304 (366)
.+..+.. ++. .+.++|++.|+| |...|+||++|++++|+|+.+.++.+++.++|+++++.++..
T Consensus 302 ~l~~r~~--------------~~~-~~~tvnvg~I~G-G~~~NvIPd~~~l~~diR~~~~e~~e~l~~~I~~~~~~~a~~ 365 (478)
T PLN02280 302 GIVSREA--------------NPL-DSQVVSVTTMDG-GNNLDMIPDTVVLGGTFRAFSNTSFYQLLKRIQEVIVEQAGV 365 (478)
T ss_pred HHHhccc--------------CCC-CCcEEEEEEEEc-cCCCCEeCCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8754311 122 357899999999 999999999999999999999999999999999999998888
Q ss_pred hCceEEEEe-------e----ehHHHHHHHHHHhhcc-CCC--CCCCCCchhhHHHHHhhhcCEEEEEEeeCC
Q 017774 305 RSVSCIVER-------K----LKSASYAALKRMTGAT-QHE--IPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 363 (366)
Q Consensus 305 ~~~~~~v~~-------~----~~~~l~~~~~~~~g~~-~~~--~~~~~~~ggtD~~~~~~~iP~~~~~~g~~~ 363 (366)
+++++++.. . ..+.+.+.++++..+. +.+ ....+..|++||++|++.+|++++++|.++
T Consensus 366 ~g~~~~v~~~~~~~~~~pp~~n~~~l~~~~~~~a~~~~G~~~~~~~~~~~g~tD~~~~~~~vP~i~~glG~~~ 438 (478)
T PLN02280 366 FRCSATVDFFEKQNTIYPPTVNNDAMYEHVRKVAIDLLGPANFTVVPPMMGAEDFSFYSQVVPAAFYYIGIRN 438 (478)
T ss_pred hCCeEEEEEeccccCCCCCccCCHHHHHHHHHHHHHhcCccccccCCCCeeechHHHHHhhCCEEEEEEeecC
Confidence 888766653 1 2344555555443221 211 111235699999999989999999888654
No 13
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=1.2e-38 Score=304.38 Aligned_cols=299 Identities=19% Similarity=0.230 Sum_probs=223.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE--cCcCCEEEEecCCCCCCCeEEEecccCccccCC---------------CCCCH
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWV--DHLGNVHGRVEGLNASAQALLIGSHLDTVVDAG---------------IFDGS 63 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~--~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~gg---------------~~D~k 63 (366)
.|++|.++++||.++|+++|+++++ ...+|+++++++..+ .|+|+|+|||||||.+. +.+.+
T Consensus 14 ~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~-~~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~~ 92 (363)
T TIGR01891 14 LSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKP-GPVVALRADMDALPIQEQTDLPYKSTNPGVMHACGHD 92 (363)
T ss_pred CCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCC-CCEEEEEeccCCCCcccccCCCcccCCCCceecCcCH
Confidence 4789999999999999999999875 235689999876443 48999999999998531 11335
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCch
Q 017774 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIA 143 (366)
Q Consensus 64 ~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~ 143 (366)
++++++|+++..|++.+. +++++|.|+|++|||.+ .|++.++.. +.
T Consensus 93 ~~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~~------~G~~~~~~~-----------------------~~--- 138 (363)
T TIGR01891 93 LHTAILLGTAKLLKKLAD--LLEGTVRLIFQPAEEGG------GGATKMIED-----------------------GV--- 138 (363)
T ss_pred HHHHHHHHHHHHHHhchh--hCCceEEEEEeecCcCc------chHHHHHHC-----------------------CC---
Confidence 778888999999988765 67899999999999985 388887521 00
Q ss_pred hhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 017774 144 EESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL 223 (366)
Q Consensus 144 ~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l 223 (366)
+ +.+...+.++.+++...... ......+++|..+++++++|+++|++. | +.+.||+..+++++..+
T Consensus 139 --------~--~~~d~~i~~e~~~~~~~~~~--~~~~~~~~~g~~~~~i~~~G~~~Has~-p-~~g~nAi~~~~~~i~~l 204 (363)
T TIGR01891 139 --------L--DDVDAILGLHPDPSIPAGTV--GLRPGTIMAAADKFEVTIHGKGAHAAR-P-HLGRDALDAAAQLVVAL 204 (363)
T ss_pred --------C--CCcCEEEEECCCCCCCCeEE--EECCCcceeecceEEEEEEeecccccC-c-ccccCHHHHHHHHHHHH
Confidence 0 01112222233221111000 011123478999999999999999977 8 89999999999999999
Q ss_pred HHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHH
Q 017774 224 ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICE 303 (366)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~ 303 (366)
+++..+... +. .+.++|++.|++ |.+.|+||++|++.+|+|+.|.++.+++.+.|++++++++.
T Consensus 205 ~~~~~~~~~--------------~~-~~~~~~i~~i~g-G~~~nvvP~~~~~~~diR~~~~~~~e~~~~~i~~~~~~~~~ 268 (363)
T TIGR01891 205 QQIVSRNVD--------------PS-RPAVVTVGIIEA-GGAPNVIPDKASMSGTVRSLDPEVRDQIIDRIERIVEGAAA 268 (363)
T ss_pred HHHhhccCC--------------CC-CCcEEEEEEEEc-CCCCcEECCeeEEEEEEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 886432110 12 356899999999 89999999999999999999999999999999999999887
Q ss_pred HhCceEEEEee-------ehHHHHHHHHHHhhc-cCC-CC--CCCCCchhhHHHHHhhhcCEEEEEEeeCCC
Q 017774 304 KRSVSCIVERK-------LKSASYAALKRMTGA-TQH-EI--PVIMSGAGHDAMAMSHLTKVCSLLCRLNNL 364 (366)
Q Consensus 304 ~~~~~~~v~~~-------~~~~l~~~~~~~~g~-~~~-~~--~~~~~~ggtD~~~~~~~iP~~~~~~g~~~~ 364 (366)
..++++++... ..+++.+.++++..+ .+. .. ....++||+|+++|++.+|++++|+|+.++
T Consensus 269 ~~~~~ve~~~~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~~~~gg~Da~~~~~~~P~~~~f~~~~~~ 340 (363)
T TIGR01891 269 MYGAKVELNYDRGLPAVTNDPALTQILKEVARHVVGPENVAEDPEVTMGSEDFAYYSQKVPGAFFFLGIGNE 340 (363)
T ss_pred HhCCeEEEEEecCCCCccCCHHHHHHHHHHHHHhcCccceeccCCCCccccCHHHHHHhCCeeEEEEecCCC
Confidence 77888877654 345666666666554 231 11 122478999999999999999999999864
No 14
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-38 Score=305.77 Aligned_cols=277 Identities=21% Similarity=0.192 Sum_probs=219.3
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcC-----------c-------CCEEEEecCCCCCCCeEEEecccCccccC---------
Q 017774 5 SVRAGNLIRQWMEDAGLRTWVDH-----------L-------GNVHGRVEGLNASAQALLIGSHLDTVVDA--------- 57 (366)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~~-----------~-------gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------- 57 (366)
+.++++||.++|+++|++++..+ + +|+++++++.. .++|+|+|||||||++
T Consensus 39 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~~~~--~~~lll~gH~DvVp~~~~Pf~~~~~ 116 (402)
T PRK07338 39 LARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGPALHVSVRPEA--PRQVLLTGHMDTVFPADHPFQTLSW 116 (402)
T ss_pred HHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCCeEEEEECCCC--CccEEEEeecCccCCCCCcccCCeE
Confidence 56899999999999999876421 1 48999986432 3689999999999852
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCC
Q 017774 58 ---------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSG 128 (366)
Q Consensus 58 ---------g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g 128 (366)
|+.|||+|++++|+|+++|++.+. +++++|.|+|++|||.++ .|++.++...
T Consensus 117 ~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~~~~~------------ 177 (402)
T PRK07338 117 LDDGTLNGPGVADMKGGIVVMLAALLAFERSPL--ADKLGYDVLINPDEEIGS-----PASAPLLAEL------------ 177 (402)
T ss_pred eeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCC--CCCCCEEEEEECCcccCC-----hhhHHHHHHH------------
Confidence 668999999999999999998886 778999999999999864 4777665210
Q ss_pred CcHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCC
Q 017774 129 VTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSM 208 (366)
Q Consensus 129 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~ 208 (366)
. ...+ .+ ++.||+. ....++.+.+|..+++|+++|+++|+|..| +.
T Consensus 178 ------~----------------~~~~--~~---i~~ep~~------~~~~v~~~~kG~~~~~v~v~G~~aHs~~~p-~~ 223 (402)
T PRK07338 178 ------A----------------RGKH--AA---LTYEPAL------PDGTLAGARKGSGNFTIVVTGRAAHAGRAF-DE 223 (402)
T ss_pred ------h----------------ccCc--EE---EEecCCC------CCCcEEeecceeEEEEEEEEeEcccCCCCc-cc
Confidence 0 0011 12 4555421 111255678999999999999999999778 79
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHH
Q 017774 209 RQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRE 288 (366)
Q Consensus 209 g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~ 288 (366)
+.|||..+++++..|+++... . ..+++|++.|++ |.+.|+||++|++++|+|+.|.++.+
T Consensus 224 g~nAi~~~~~~i~~l~~l~~~------------------~-~~~t~~vg~i~g-G~~~nvVP~~a~~~~d~R~~~~~~~~ 283 (402)
T PRK07338 224 GRNAIVAAAELALALHALNGQ------------------R-DGVTVNVAKIDG-GGPLNVVPDNAVLRFNIRPPTPEDAA 283 (402)
T ss_pred CccHHHHHHHHHHHHHhhhcc------------------C-CCcEEEEEEEec-CCCCceeccccEEEEEeccCCHHHHH
Confidence 999999999999999876542 1 356899999999 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCceEEEEee----------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEE
Q 017774 289 TVLYELSNQLYQICEKRSVSCIVERK----------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCS 356 (366)
Q Consensus 289 ~~~~~i~~~~~~~~~~~~~~~~v~~~----------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~ 356 (366)
++.++|++++++++..+++++++... -...+.++++++..+.+.++....++|++|+++++.. +|++.
T Consensus 284 ~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~g~tDa~~~~~~giP~v~ 362 (402)
T PRK07338 284 WAEAELKKLIAQVNQRHGVSLHLHGGFGRPPKPIDAAQQRLFEAVQACGAALGLTIDWKDSGGVCDGNNLAAAGLPVVD 362 (402)
T ss_pred HHHHHHHHHHhccccCCCeEEEEEccccCCCCCCCcchHHHHHHHHHHHHHcCCCcccccCCccchHHHHhhcCCCeEe
Confidence 99999999998876667777776432 1236778888776666655555567899999999877 99986
No 15
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=6.8e-38 Score=300.72 Aligned_cols=285 Identities=19% Similarity=0.262 Sum_probs=217.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc----CcCCEEEEecCCCCCCCeEEEecccCccccC-------------------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVD----HLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~----~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g------------------- 57 (366)
.|++|.++++||.++|+++|++++.. ...|+++++ |++ .|+|+|+|||||||.+
T Consensus 17 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~-g~~--~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l 93 (377)
T PRK08588 17 VNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEI-GSG--SPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKL 93 (377)
T ss_pred CCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEe-CCC--CceEEEEeeecccCCCCcccCcCCCCCeEEECCEE
Confidence 36889999999999999999987653 345899998 433 3899999999999963
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHH
Q 017774 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (366)
Q Consensus 58 ---g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~ 134 (366)
|..|||+|++++|+++++|++.+. .++++|.|+|++|||.++ .|++.+++.
T Consensus 94 ~GrG~~D~Kgg~aa~l~a~~~l~~~~~--~~~~~i~l~~~~dEE~g~-----~G~~~~~~~------------------- 147 (377)
T PRK08588 94 YGRGATDMKSGLAALVIAMIELKEQGQ--LLNGTIRLLATAGEEVGE-----LGAKQLTEK------------------- 147 (377)
T ss_pred EecCcccccchHHHHHHHHHHHHHcCC--CCCCcEEEEEEcccccCc-----hhHHHHHhc-------------------
Confidence 456999999999999999999986 788999999999999763 588887621
Q ss_pred HHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHH
Q 017774 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (366)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~ 214 (366)
|+. -++| +. +..+|. ...++.+++|..+++|+++|+++|+|. | +.|.|||.
T Consensus 148 ----~~~----------~~~d---~~--i~~ep~--------~~~i~~~~~G~~~~~i~~~G~~~Hss~-p-~~g~nAi~ 198 (377)
T PRK08588 148 ----GYA----------DDLD---AL--IIGEPS--------GHGIVYAHKGSMDYKVTSTGKAAHSSM-P-ELGVNAID 198 (377)
T ss_pred ----Ccc----------CCCC---EE--EEecCC--------CceeEEEEEEEEEEEEEEEeechhccC-C-ccccCHHH
Confidence 110 0112 11 122321 123667899999999999999999998 8 89999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHH
Q 017774 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (366)
Q Consensus 215 ~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i 294 (366)
.+++++..++.+..+... . + +..+.++++++.|++ |...|+||++|++++|+|+.|.++.+++.++|
T Consensus 199 ~~~~~l~~l~~~~~~~~~------~-~-----~~~~~~t~~v~~i~g-G~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i 265 (377)
T PRK08588 199 PLLEFYNEQKEYFDSIKK------H-N-----PYLGGLTHVVTIING-GEQVNSVPDEAELEFNIRTIPEYDNDQVISLL 265 (377)
T ss_pred HHHHHHHHHHHHhhhhcc------c-C-----ccCCCCceeeeEEeC-CCcCCcCCCeEEEEEEeccCCCCCHHHHHHHH
Confidence 999999999876432110 0 0 111467999999999 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCceEEEEee---------ehHHHHHHHHHHhhc-cCCCCCCCCCchhhHHHHHhhh---cCEEE
Q 017774 295 SNQLYQICEKRSVSCIVERK---------LKSASYAALKRMTGA-TQHEIPVIMSGAGHDAMAMSHL---TKVCS 356 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~v~~~---------~~~~l~~~~~~~~g~-~~~~~~~~~~~ggtD~~~~~~~---iP~~~ 356 (366)
++++++.+...+++++++.. ..+++.+.++++..+ .+..+....++|++|+++|... +|++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~g~tD~~~~~~~~~~ip~i~ 340 (377)
T PRK08588 266 QEIINEVNQNGAAQLSLDIYSNHRPVASDKDSKLVQLAKDVAKSYVGQDIPLSAIPGATDASSFLKKKPDFPVII 340 (377)
T ss_pred HHHHHHHhhccCCceEEEEecCCCCcCCCCCCHHHHHHHHHHHHhhCCCCceecCCCcccHHHHhhhcCCCCEEE
Confidence 99998877656666666543 124555555555443 2333444456799999999864 56654
No 16
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=4.7e-38 Score=306.11 Aligned_cols=294 Identities=16% Similarity=0.179 Sum_probs=216.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---------------------CcCCEEEEecCCCCCCCeEEEecccCccccC--
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVD---------------------HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~---------------------~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g-- 57 (366)
.|++|.++++||+++|+++|+++++. ..+|++++++|..+ .|+|+|+|||||||.+
T Consensus 32 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~~-~~~l~l~~H~Dtvp~~~~ 110 (422)
T PRK06915 32 VSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDSPNIVATLKGSGG-GKSMILNGHIDVVPEGDV 110 (422)
T ss_pred CCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCCceEEEEEcCCCC-CCeEEEEeeccccCCCCc
Confidence 37889999999999999999987531 34789999987654 4899999999999863
Q ss_pred --------------------CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccc
Q 017774 58 --------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (366)
Q Consensus 58 --------------------g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (366)
|..|||+|++++|.|+++|++.+. +++++|.|++++|||+++ .|+..++.
T Consensus 111 ~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~-----~G~~~~~~--- 180 (422)
T PRK06915 111 NQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGI--ELKGDVIFQSVIEEESGG-----AGTLAAIL--- 180 (422)
T ss_pred ccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCC--CCCCcEEEEEecccccCC-----cchHHHHh---
Confidence 556999999999999999999886 788999999999999763 36665431
Q ss_pred cccccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeC
Q 017774 118 VSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGS 197 (366)
Q Consensus 118 ~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~ 197 (366)
.|+ .+|.+ +..|| .+ ..++.+++|..+++|+++|+
T Consensus 181 --------------------~~~------------~~d~~-----i~~ep------~~--~~i~~~~~G~~~~~i~v~G~ 215 (422)
T PRK06915 181 --------------------RGY------------KADGA-----IIPEP------TN--MKFFPKQQGSMWFRLHVKGK 215 (422)
T ss_pred --------------------cCc------------CCCEE-----EECCC------CC--ccceeecccEEEEEEEEEee
Confidence 111 12221 12232 22 23567899999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEE
Q 017774 198 QGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTV 277 (366)
Q Consensus 198 ~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~ 277 (366)
++|+|. | +.|.|||..+++++..|+.+........ ....+. ....++++|++.|+| |...|+||++|++.+
T Consensus 216 ~~H~s~-p-~~g~nAi~~~~~~~~~l~~l~~~~~~~~-~~~~~~-----~~~~~~t~~v~~i~g-G~~~nvvP~~a~~~~ 286 (422)
T PRK06915 216 AAHGGT-R-YEGVSAIEKSMFVIDHLRKLEEKRNDRI-TDPLYK-----GIPIPIPINIGKIEG-GSWPSSVPDSVILEG 286 (422)
T ss_pred ccccCC-C-CcCcCHHHHHHHHHHHHHHHHHHhcccc-CCCccc-----CCCCCceEeEEEeeC-CCCCCccCcEEEEEE
Confidence 999998 8 8999999999999999988753210000 000000 011256899999999 899999999999999
Q ss_pred EeeCCChHHHHHHHHHHHHHHHHHHHH------hCceEEEEe----e----ehHHHHHHHHHHhhcc-CCCCCCCCCchh
Q 017774 278 DLRAIDDAGRETVLYELSNQLYQICEK------RSVSCIVER----K----LKSASYAALKRMTGAT-QHEIPVIMSGAG 342 (366)
Q Consensus 278 diR~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~v~~----~----~~~~l~~~~~~~~g~~-~~~~~~~~~~gg 342 (366)
|+|+.|.++.+++.++|++.+++++.. ..+++++.. . ..+.+.+.++++..+. +..+....++|+
T Consensus 287 d~R~~p~~~~~~v~~~i~~~l~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~d~~lv~~l~~a~~~~~G~~~~~~~~~g~ 366 (422)
T PRK06915 287 RCGIAPNETIEAAKEEFENWIAELNDVDEWFVEHPVEVEWFGARWVPGELEENHPLMTTLEHNFVEIEGNKPIIEASPWG 366 (422)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHhccChhhhcCCceEEeecccCCcccCCCCCHHHHHHHHHHHHHhCCCCeeceeeee
Confidence 999999999999999999999887653 224443321 1 2344444444444331 333333456789
Q ss_pred hHHHHHhhh--cCEEEEEEe
Q 017774 343 HDAMAMSHL--TKVCSLLCR 360 (366)
Q Consensus 343 tD~~~~~~~--iP~~~~~~g 360 (366)
+|+++|++. +|++. |.+
T Consensus 367 tD~~~~~~~~giP~v~-fGp 385 (422)
T PRK06915 367 TDGGLLTQIAGVPTIV-FGP 385 (422)
T ss_pred ccHHHHhccCCCCEEE-ECC
Confidence 999999986 99975 444
No 17
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=6.3e-38 Score=299.24 Aligned_cols=284 Identities=18% Similarity=0.220 Sum_probs=222.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcC-------cCCEEEEecCCCCCCCeEEEecccCccccC---------------C
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDH-------LGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------G 58 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~-------~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------g 58 (366)
.|++|.++++||.++|+++|+++++++ ..|++++++|..+ .|+|+|.|||||||.+ |
T Consensus 15 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G 93 (361)
T TIGR01883 15 ESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVK-FDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLG 93 (361)
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCC-CCcEEEEeeccccCCCCCCCceecCCeEecCC
Confidence 367899999999999999999987654 5789999977643 4899999999999953 3
Q ss_pred C----CCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHH
Q 017774 59 I----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (366)
Q Consensus 59 ~----~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~ 134 (366)
. .|||++++++|++++.|++.+ .++++|.|+|++|||.+. .|++.+...
T Consensus 94 ~~~~g~D~k~g~a~~l~~~~~l~~~~---~~~~~v~~~~~~~EE~g~-----~G~~~~~~~------------------- 146 (361)
T TIGR01883 94 GTILGADDKAGVAAMLEAMDVLSTEE---TPHGTIEFIFTVKEELGL-----IGMRLFDES------------------- 146 (361)
T ss_pred CeEeeccccHHHHHHHHHHHHHHhcC---CCCCCEEEEEEcccccCc-----hhHhHhChh-------------------
Confidence 3 799999999999999998875 568899999999999763 588766410
Q ss_pred HHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHH
Q 017774 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (366)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~ 214 (366)
.... .++ ++.+++. ....++.+.+|..+++++++|+++|++..| +.|.||+.
T Consensus 147 ----------------~~~~--~~~---~~~~~~~------~~~~i~~~~~g~~~~~i~~~G~~~Ha~~~p-~~g~nAi~ 198 (361)
T TIGR01883 147 ----------------KITA--AYG---YCLDAPG------EVGNIQLAAPTQVKVDATIAGKDAHAGLVP-EDGISAIS 198 (361)
T ss_pred ----------------hcCc--cee---EEEeCCC------CcceEEecCCceEEEEEEEEeeecCCCCCc-ccCcCHHH
Confidence 0001 112 3444321 111255678999999999999999986558 89999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHH
Q 017774 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (366)
Q Consensus 215 ~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i 294 (366)
.+++++..|+.... + ...+++++.|++ |...|+||++|++.+|+|+.|..+.+++.++|
T Consensus 199 ~~~~~i~~l~~~~~------------------~--~~~~~~i~~i~g-G~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i 257 (361)
T TIGR01883 199 VARMAIHAMRLGRI------------------D--EETTANIGSFSG-GVNTNIVQDEQLIVAEARSLSFRKAEAQVQTM 257 (361)
T ss_pred HHHHHHHhccccCC------------------C--Cccccccceeec-CCccCccCCceEEEEEEecCCHHHHHHHHHHH
Confidence 99999998863211 1 246789999999 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCceEEEEee---------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEEEEee
Q 017774 295 SNQLYQICEKRSVSCIVERK---------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 361 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~v~~~---------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~~g~ 361 (366)
++.+++.+..+++++++... ..+.+.+.+++++.+.+.++....++|++|+++|++. +|++.++.|.
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~g~~~~~~~~~g~tD~~~~~~~giP~v~~G~g~ 334 (361)
T TIGR01883 258 RERFEQAAEKYGATLEEETRLIYEGFKIHPQHPLMNIFKKAAKKIGLKTSEIFSGGGSDANVLNEKGVPTVNLSAGY 334 (361)
T ss_pred HHHHHHHHHHcCCEEEEEEEeccccccCCCCCHHHHHHHHHHHHcCCCcEEEecCcccHHHHHhhCCCceEEECCCc
Confidence 99999888778877766532 2456777777776655554444567799999999976 9999876654
No 18
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=2.6e-37 Score=296.44 Aligned_cols=292 Identities=23% Similarity=0.254 Sum_probs=218.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEc----CcC----CEEEEecCCCCCCCeEEEecccCccccC----------------
Q 017774 2 SPASVRAGNLIRQWMEDAGLRTWVD----HLG----NVHGRVEGLNASAQALLIGSHLDTVVDA---------------- 57 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~----~~g----nvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------- 57 (366)
|++|.++++||.++|+++|++++.. ..+ |+++.+.|.+ +.|+|+|+|||||||.+
T Consensus 17 ~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~ill~~H~DtVp~~~~~~w~~~Pf~~~~~~ 95 (375)
T TIGR01910 17 GGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNG-NEKSLIFNGHYDVVPAGDLELWKTDPFKPVEKD 95 (375)
T ss_pred CcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCC-CCCEEEEecccccccCCChhhCcCCCCCcEEEC
Confidence 5789999999999999999987642 223 3677776654 35899999999999974
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcH
Q 017774 58 ------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTV 131 (366)
Q Consensus 58 ------g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~ 131 (366)
|..|||++++++|++++.|++.+. +++++|.|+|+++||.++ .|++.++..
T Consensus 96 g~i~grG~~D~k~~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g~-----~G~~~~~~~---------------- 152 (375)
T TIGR01910 96 GKLYGRGATDMKGGLVALLYALKAIREAGI--KPNGNIILQSVVDEESGE-----AGTLYLLQR---------------- 152 (375)
T ss_pred CEEEecCccccchHHHHHHHHHHHHHHcCC--CCCccEEEEEEcCcccCc-----hhHHHHHHc----------------
Confidence 567999999999999999999886 789999999999999763 588887621
Q ss_pred HHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCC
Q 017774 132 LDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 211 (366)
Q Consensus 132 ~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~N 211 (366)
+.. . .+|.+ +..+++ + ...++.+.+|..+++|+++|+++|+|. | +.+.|
T Consensus 153 -------~~~---------~-~~d~~-----i~~~~~------~-~~~v~~~~~G~~~~~i~~~G~~~Hs~~-p-~~g~n 201 (375)
T TIGR01910 153 -------GYF---------K-DADGV-----LIPEPS------G-GDNIVIGHKGSIWFKLRVKGKQAHASF-P-QFGVN 201 (375)
T ss_pred -------CCC---------C-CCCEE-----EECCCC------C-CCceEEEecceEEEEEEEeeeecccCC-C-Ccchh
Confidence 000 0 01211 223322 1 223667899999999999999999998 8 89999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHH
Q 017774 212 PMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVL 291 (366)
Q Consensus 212 Ai~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~ 291 (366)
||..++++|.+|+.+.........+ . .....++++++.|++ |...|+||++|++++|+|+.|.++.+++.
T Consensus 202 Ai~~~~~~l~~l~~~~~~~~~~~~~--~-------~~~~~~t~~i~~i~g-G~~~nviP~~~~~~~diR~~~~~~~~~~~ 271 (375)
T TIGR01910 202 AIMKLAKLITELNELEEHIYARNSY--G-------FIPGPITFNPGVIKG-GDWVNSVPDYCEFSIDVRIIPEENLDEVK 271 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccc--c-------ccCCCccccceeEEC-CCCcCcCCCEEEEEEEeeeCCCCCHHHHH
Confidence 9999999999998875422110000 0 011367999999999 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCceEEEEe-------e---ehHHHHHHHHHHhhc-cCCCCCCCCCchhhHHHHHhhh-cCEEEEE
Q 017774 292 YELSNQLYQICEKRSVSCIVER-------K---LKSASYAALKRMTGA-TQHEIPVIMSGAGHDAMAMSHL-TKVCSLL 358 (366)
Q Consensus 292 ~~i~~~~~~~~~~~~~~~~v~~-------~---~~~~l~~~~~~~~g~-~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~ 358 (366)
++|++++++.+..+++++++.. . ..+++.++++++..+ .+.++....++|++|+++|.+. +|++.+.
T Consensus 272 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~tD~~~~~~~gip~v~~G 350 (375)
T TIGR01910 272 QIIEDVVKALSKSDGWLYENEPVVKWSGPNETPPDSRLVKALEAIIKKVRGIEPEVLVSTGGTDARFLRKAGIPSIVYG 350 (375)
T ss_pred HHHHHHHHHHhhcCcHHhhCCCeeeecCCcCCCCCCHHHHHHHHHHHHHhCCCCeEeeeccchhHHHHHHcCCcEEEEC
Confidence 9999999887755555554421 1 234455555554433 2333333456799999999987 9997633
No 19
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=1.8e-36 Score=293.49 Aligned_cols=280 Identities=19% Similarity=0.210 Sum_probs=216.7
Q ss_pred HHHHHHHHHHHHHHcCCEEEEcC-----cCCEEEEecCCCCCCCeEEEecccCccccC------------------CCCC
Q 017774 5 SVRAGNLIRQWMEDAGLRTWVDH-----LGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------GIFD 61 (366)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~~-----~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g------------------g~~D 61 (366)
+.++++||.++|+++|++++++. ..|++++++|++ .|+|+|+|||||||.+ |..|
T Consensus 59 ~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~--~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D 136 (410)
T PRK06133 59 LKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTG--KRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIAD 136 (410)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCC--CceEEEEeecCccCCCCccCCCCEEEECCEEECCcccc
Confidence 45899999999999999987542 347999997643 4899999999999863 5569
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCC
Q 017774 62 GSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSID 141 (366)
Q Consensus 62 ~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~ 141 (366)
||++++++|+++++|++.+. +++++|.|+|++|||.++ .|++.++...
T Consensus 137 ~kgg~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~G~~~~~~~~------------------------- 184 (410)
T PRK06133 137 DKGGVAVILHALKILQQLGF--KDYGTLTVLFNPDEETGS-----PGSRELIAEL------------------------- 184 (410)
T ss_pred chHHHHHHHHHHHHHHHcCC--CCCCCEEEEEECCcccCC-----ccHHHHHHHH-------------------------
Confidence 99999999999999999886 778999999999999763 5888876210
Q ss_pred chhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHH
Q 017774 142 IAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIV 221 (366)
Q Consensus 142 ~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~ 221 (366)
...+|.+ +..+|+. ....+..+++|..+++++++|+++|++..| +.+.||+..+++++.
T Consensus 185 ---------~~~~d~~-----i~~ep~~------~~~~v~~~~~G~~~~~v~v~G~~~Hsg~~p-~~g~nAi~~~~~~i~ 243 (410)
T PRK06133 185 ---------AAQHDVV-----FSCEPGR------AKDALTLATSGIATALLEVKGKASHAGAAP-ELGRNALYELAHQLL 243 (410)
T ss_pred ---------hccCCEE-----EEeCCCC------CCCCEEEeccceEEEEEEEEeeccccCCCc-ccCcCHHHHHHHHHH
Confidence 0012221 2334321 101356679999999999999999987558 899999999999999
Q ss_pred HHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHH
Q 017774 222 LLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQI 301 (366)
Q Consensus 222 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~ 301 (366)
.|+++... . ..++++++.|++ |++.|+||++|++.+|+|+.|.++.+++.++|++++++
T Consensus 244 ~l~~~~~~------------------~-~~~t~~~~~i~g-G~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~- 302 (410)
T PRK06133 244 QLRDLGDP------------------A-KGTTLNWTVAKA-GTNRNVIPASASAQADVRYLDPAEFDRLEADLQEKVKN- 302 (410)
T ss_pred HHHhccCC------------------C-CCeEEEeeEEEC-CCCCceeCCccEEEEEEEECCHHHHHHHHHHHHHHHhc-
Confidence 98875431 1 356899999999 89999999999999999999999999999999999976
Q ss_pred HHHhCceEEEEee----------ehHHHHHHHHHHhhccCCCCCC--CCCchhhHHHHHhhh-cCEEEEEEe
Q 017774 302 CEKRSVSCIVERK----------LKSASYAALKRMTGATQHEIPV--IMSGAGHDAMAMSHL-TKVCSLLCR 360 (366)
Q Consensus 302 ~~~~~~~~~v~~~----------~~~~l~~~~~~~~g~~~~~~~~--~~~~ggtD~~~~~~~-iP~~~~~~g 360 (366)
+...+++++++.. ....+.+++++.+++.+..+.. ..++|++|+++++.. +|++++..|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~tDa~~~~~~gip~v~~g~G 374 (410)
T PRK06133 303 KLVPDTEVTLRFERGRPPLEANAASRALAEHAQGIYGELGRRLEPIDMGTGGGTDAAFAAGSGKAAVLEGFG 374 (410)
T ss_pred cCCCCeEEEEEeccccCCcccCcchHHHHHHHHHHHHHcCCCccccccCCCCCchHHHHHhcCCCceEeccc
Confidence 3345666666542 2346777777777665443222 346799999999987 888865333
No 20
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.3e-36 Score=296.53 Aligned_cols=302 Identities=15% Similarity=0.133 Sum_probs=216.4
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcC------------cCCEEEEecCCCCCCCeEEEecccCccccC--------------
Q 017774 4 ASVRAGNLIRQWMEDAGLRTWVDH------------LGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------- 57 (366)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~------------~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g-------------- 57 (366)
+|+++++||.++|+++|++++... +.|++++++|..+ .|+|+|+|||||||.+
T Consensus 35 ~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~~~-~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~d 113 (427)
T PRK13013 35 AYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGARD-GDCVHFNSHHDVVEVGHGWTRDPFGGEVKD 113 (427)
T ss_pred cHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCCCC-CCEEEEEeccccCCCCCCCcCCCCCceEEC
Confidence 568999999999999999876432 3489999976543 4899999999999864
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcH
Q 017774 58 ------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTV 131 (366)
Q Consensus 58 ------g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~ 131 (366)
|+.|||++++++|+++++|++.+. +++++|.|+|++|||.++ ..|.+++.+
T Consensus 114 g~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~----~~g~~~l~~----------------- 170 (427)
T PRK13013 114 GRIYGRGACDMKGGLAASIIAAEAFLAVYP--DFAGSIEISGTADEESGG----FGGVAYLAE----------------- 170 (427)
T ss_pred CEEEeccccccchHHHHHHHHHHHHHHhCC--CCCccEEEEEEeccccCC----hhHHHHHHh-----------------
Confidence 677999999999999999999886 788999999999999863 125555431
Q ss_pred HHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCC
Q 017774 132 LDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQD 211 (366)
Q Consensus 132 ~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~N 211 (366)
.|. +.++...+. +..||. +. ..+..+++|..+++|+++|+++|++. | +.|.|
T Consensus 171 ------~~~-----------~~~~~~d~~--i~~ep~------~~-~~i~~~~~G~~~~~i~v~G~~~H~~~-p-~~g~n 222 (427)
T PRK13013 171 ------QGR-----------FSPDRVQHV--IIPEPL------NK-DRICLGHRGVWWAEVETRGRIAHGSM-P-FLGDS 222 (427)
T ss_pred ------cCC-----------ccccCCCEE--EEecCC------CC-CceEEeeeeEEEEEEEEEccccccCC-C-CcCcC
Confidence 111 111111121 223332 11 13567899999999999999999998 8 89999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCc----------ceeCCeEEEEEEeeC
Q 017774 212 PMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSAS----------NVIPGEVTFTVDLRA 281 (366)
Q Consensus 212 Ai~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~----------NvIP~~~~~~~diR~ 281 (366)
||..++++|.+|+....+.... .....+.. +......++|++.|++ |... |+||++|++++|+|+
T Consensus 223 ai~~~~~~l~~l~~~~~~~~~~---~~~~~~~~-~~~~~~~t~~v~~i~g-G~~~~~~~~~~~~~n~IPd~a~~~idiR~ 297 (427)
T PRK13013 223 AIRHMGAVLAEIEERLFPLLAT---RRTAMPVV-PEGARQSTLNINSIHG-GEPEQDPDYTGLPAPCVADRCRIVIDRRF 297 (427)
T ss_pred HHHHHHHHHHHHHHHhhhhhhc---ccccCCCC-CcccCCCceeeeEEeC-CCccccccccccccccCCceEEEEEEEEe
Confidence 9999999999997653211100 00000000 0001357899999998 7766 999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHh-CceEEEEee---------ehHHHHHHHHHHhhc-cCCCCCCCCCchhhHHHHHhh
Q 017774 282 IDDAGRETVLYELSNQLYQICEKR-SVSCIVERK---------LKSASYAALKRMTGA-TQHEIPVIMSGAGHDAMAMSH 350 (366)
Q Consensus 282 ~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~v~~~---------~~~~l~~~~~~~~g~-~~~~~~~~~~~ggtD~~~~~~ 350 (366)
.|.++.+++.++|++.++++++.. ++++++... ...++.+++.++..+ .+.++....++|++|++++++
T Consensus 298 ~p~~~~~~v~~~i~~~i~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~lv~~l~~a~~~~~g~~~~~~~~~g~~D~~~~~~ 377 (427)
T PRK13013 298 LIEEDLDEVKAEITALLERLKRARPGFAYEIRDLFEVLPTMTDRDAPVVRSVAAAIERVLGRQADYVVSPGTYDQKHIDR 377 (427)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhCCCceeEEEEcccCCcccCCCCCHHHHHHHHHHHHhhCCCCceeecCccCCHHHHHh
Confidence 999999999999999998876533 555555431 122455555555443 344444445778999999998
Q ss_pred h--cCEEEEEEeeC
Q 017774 351 L--TKVCSLLCRLN 362 (366)
Q Consensus 351 ~--iP~~~~~~g~~ 362 (366)
. +|.++.|.|+.
T Consensus 378 ~g~~~~~v~fGPg~ 391 (427)
T PRK13013 378 IGKLKNCIAYGPGI 391 (427)
T ss_pred cCCCCCEEEECCCC
Confidence 7 45566777754
No 21
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=8.5e-37 Score=297.40 Aligned_cols=297 Identities=16% Similarity=0.169 Sum_probs=216.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE---------------------cCcCCEEEEecCCCCCCCeEEEecccCccccC--
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWV---------------------DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~---------------------~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g-- 57 (366)
.|++|.++++||.++|+++|+++++ +..+||+++++|..++.|+|+|+|||||||.+
T Consensus 35 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~a~~~g~~~~~~~il~~gH~DvVp~~~~ 114 (427)
T PRK06837 35 TRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAPNVVGTYRPAGKTGRSLILQGHIDVVPEGPL 114 (427)
T ss_pred CCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCceEEEEecCCCCCCCeEEEEeecccCCCCCc
Confidence 4788999999999999999998753 23578999998755445899999999999974
Q ss_pred --------------------CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccc
Q 017774 58 --------------------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (366)
Q Consensus 58 --------------------g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (366)
|+.|||+|++++|+++++|++.++ .++++|.|+|+++||.++ .|+..++
T Consensus 115 ~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~~g-----~g~~~~~---- 183 (427)
T PRK06837 115 DLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGL--APAARVHFQSVIEEESTG-----NGALSTL---- 183 (427)
T ss_pred cccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCC--CCCCcEEEEEEeccccCC-----HhHHHHH----
Confidence 677999999999999999999987 789999999999999763 3554432
Q ss_pred cccccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeC
Q 017774 118 VSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGS 197 (366)
Q Consensus 118 ~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~ 197 (366)
..|+. +|.+ +..|+ .+ ..++.+.+|..+++++++|+
T Consensus 184 -------------------~~~~~------------~d~~-----iv~ep------~~--~~i~~~~~G~~~~~i~v~G~ 219 (427)
T PRK06837 184 -------------------QRGYR------------ADAC-----LIPEP------TG--EKLVRAQVGVIWFRLRVRGA 219 (427)
T ss_pred -------------------hcCcC------------CCEE-----EEcCC------CC--CccccccceeEEEEEEEEee
Confidence 11221 2221 12232 11 23667899999999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEE
Q 017774 198 QGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTV 277 (366)
Q Consensus 198 ~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~ 277 (366)
++|+|. | +.|.||+..++++|..|+.+...+.......+.+. ....++++|++.|++ |...|+||++|++.+
T Consensus 220 ~~Hs~~-p-~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~-----~~~~~~t~ni~~i~g-G~~~nvVP~~~~~~~ 291 (427)
T PRK06837 220 PVHVRE-A-GTGANAIDAAYHLIQALRELEAEWNARKASDPHFE-----DVPHPINFNVGIIKG-GDWASSVPAWCDLDC 291 (427)
T ss_pred ccccCC-c-ccCcCHHHHHHHHHHHHHHHHHHHhhcccCCCccc-----CCCCceeEeeeeEeC-CCCCCccCCEEEEEE
Confidence 999997 8 89999999999999999877532110000000010 011356899999998 899999999999999
Q ss_pred EeeCCChHHHHHHHHHHHHHHHHHHHHh------CceEEEEe-e-------ehHHHHHHHHHHhhc-cCCCCCCCCCchh
Q 017774 278 DLRAIDDAGRETVLYELSNQLYQICEKR------SVSCIVER-K-------LKSASYAALKRMTGA-TQHEIPVIMSGAG 342 (366)
Q Consensus 278 diR~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~~v~~-~-------~~~~l~~~~~~~~g~-~~~~~~~~~~~gg 342 (366)
++|+.|.++.+++.+.|++++++.+... ..++++.. . ...++.+++++++.+ .+..+....++|+
T Consensus 292 ~ir~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~g~ 371 (427)
T PRK06837 292 RIAIYPGVTAADAQAEIEACLAAAARDDRFLSNNPPEVVWSGFLAEGYVLEPGSEAEAALARAHAAVFGGPLRSFVTTAY 371 (427)
T ss_pred EEeECCCCCHHHHHHHHHHHHHHHHhcChhhhhCCCeEEEEecccCCcCCCCCCHHHHHHHHHHHHHhCCCCeeeEEeec
Confidence 9999999999999999999998765432 13444321 1 123455555554443 2333444457899
Q ss_pred hHHHHHhh-h-cCEEEEEEee
Q 017774 343 HDAMAMSH-L-TKVCSLLCRL 361 (366)
Q Consensus 343 tD~~~~~~-~-iP~~~~~~g~ 361 (366)
+|++++++ . +|++. |.++
T Consensus 372 tDa~~~~~~~gip~v~-~Gp~ 391 (427)
T PRK06837 372 TDTRFYGLYYGIPALC-YGPS 391 (427)
T ss_pred cchHHHhccCCCCEEE-ECCC
Confidence 99999985 3 99874 5554
No 22
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=2.5e-36 Score=292.21 Aligned_cols=281 Identities=18% Similarity=0.143 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcCcCCEEEEecCCCCCCCeEEEecccCccccC------------------------
Q 017774 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------------ 57 (366)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g------------------------ 57 (366)
..|.++++||.++|+++|++ +++++.+||+++++|++++.|+|+|+|||||||.+
T Consensus 28 ~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~~~~~~~~p~~~~~~~~~~~~~~~~~ 107 (404)
T PRK13381 28 PGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDVGLSPDIHPQILRFDGGDLCLNAEQG 107 (404)
T ss_pred hhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCccCCCCcCcEEEecCCCceecCCccc
Confidence 46789999999999999994 66788899999998765545899999999999854
Q ss_pred -----------------------CC----CCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchH
Q 017774 58 -----------------------GI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSA 110 (366)
Q Consensus 58 -----------------------g~----~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~ 110 (366)
|. .|||+|++++|.|+++|++.+ .++++|.|+|++|||.+. .|++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~---~~~g~i~~~~~~dEE~g~-----~G~~ 179 (404)
T PRK13381 108 IWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE---VEHGDIVVAFVPDEEIGL-----RGAK 179 (404)
T ss_pred eeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC---CCCCCEEEEEEccccccc-----ccHH
Confidence 34 899999999999999998875 568899999999999863 5888
Q ss_pred HhhcccccccccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEE
Q 017774 111 ALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRL 190 (366)
Q Consensus 111 ~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~ 190 (366)
.++.. + +.+|..+ +++.+. + ..+..+.+|..|+
T Consensus 180 ~~~~~-----------------------~------------~~~d~~~-----~~~~~~---~----~~i~~~~~G~~~~ 212 (404)
T PRK13381 180 ALDLA-----------------------R------------FPVDFAY-----TIDCCE---L----GEVVYENFNAASA 212 (404)
T ss_pred HHHHh-----------------------c------------CCCCEEE-----EecCCC---c----ceEEEecCcceEE
Confidence 76410 1 1122221 222221 1 1355679999999
Q ss_pred EEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeC
Q 017774 191 KVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIP 270 (366)
Q Consensus 191 ~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP 270 (366)
+|+++|+++|++..| +.+.|||..+++++..|+.+..+... +. ...+++++.|++ + |
T Consensus 213 ~v~v~Gk~aHa~~~p-~~g~NAI~~a~~~i~~l~~~~~~~~~--------------~~-~~~~i~v~~i~g-~------p 269 (404)
T PRK13381 213 EITITGVTAHPMSAK-GVLVNPILMANDFISHFPRQETPEHT--------------EG-REGYIWVNDLQG-N------V 269 (404)
T ss_pred EEEEEeEecCCCCCc-ccCcCHHHHHHHHHHhCCccCCCCCC--------------CC-cccEEEEEeEEe-C------c
Confidence 999999999988658 78999999999999998765322100 11 134677887776 3 8
Q ss_pred CeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhC-ceEEEEee-----------ehHHHHHHHHHHhhccCCCCCCCC
Q 017774 271 GEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS-VSCIVERK-----------LKSASYAALKRMTGATQHEIPVIM 338 (366)
Q Consensus 271 ~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~v~~~-----------~~~~l~~~~~~~~g~~~~~~~~~~ 338 (366)
++|++++|+|+.|.++.+++.+.|++.++++++.++ +++++... ..+.+.++++++..+.+..+....
T Consensus 270 ~~~~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~g~~~~~~~ 349 (404)
T PRK13381 270 NKAKLKLIIRDFDLDGFEARKQFIEEVVAKINAKYPTARVSLTLTDQYSNISNSIKDDRRAVDLAFDAMKELGIEPKVIP 349 (404)
T ss_pred ceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEEEeCCchhhcccccCHHHHHHHHHHHHHcCCCeeecc
Confidence 999999999999999999999999999999888776 55555321 246677777776655554444445
Q ss_pred CchhhHHHHHhhh-cCEEEEEEee
Q 017774 339 SGAGHDAMAMSHL-TKVCSLLCRL 361 (366)
Q Consensus 339 ~~ggtD~~~~~~~-iP~~~~~~g~ 361 (366)
++|+||+++|++. +|+++++.|.
T Consensus 350 ~~g~tDa~~~~~~giP~v~~GpG~ 373 (404)
T PRK13381 350 MRGGTDGAALSAKGLPTPNLFTGA 373 (404)
T ss_pred CCccchHHHHhcCCCCeEEECccc
Confidence 6799999999876 9999987664
No 23
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=4.8e-36 Score=287.09 Aligned_cols=277 Identities=21% Similarity=0.184 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHHcCCEEEEcC----cC-CEEEEecCCCCCCCeEEEecccCccccC------------------CCCCC
Q 017774 6 VRAGNLIRQWMEDAGLRTWVDH----LG-NVHGRVEGLNASAQALLIGSHLDTVVDA------------------GIFDG 62 (366)
Q Consensus 6 ~~~~~~l~~~l~~~G~~~~~~~----~g-nvia~~~g~~~~~~~i~l~~H~D~Vp~g------------------g~~D~ 62 (366)
.++++|+.++|+++|++++... .+ |+++++++.+++.|+|+|+|||||||+. |+.||
T Consensus 34 ~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~lyGrG~~D~ 113 (376)
T PRK07473 34 NRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHPVGTLEKLPWRREGNKCYGPGILDM 113 (376)
T ss_pred HHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCCCCCccCCCeEEECCEEEcCchhhc
Confidence 3778899999999999987522 23 6889986543345899999999999642 67799
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCc
Q 017774 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDI 142 (366)
Q Consensus 63 k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~ 142 (366)
|+|++++|+|+++|++.++ .++.+|.|+|++|||.++ .|++.++...
T Consensus 114 Kgglaa~l~A~~~l~~~~~--~~~~~v~~~~~~dEE~g~-----~g~~~~~~~~-------------------------- 160 (376)
T PRK07473 114 KGGNYLALEAIRQLARAGI--TTPLPITVLFTPDEEVGT-----PSTRDLIEAE-------------------------- 160 (376)
T ss_pred hHHHHHHHHHHHHHHHcCC--CCCCCEEEEEeCCcccCC-----ccHHHHHHHh--------------------------
Confidence 9999999999999999886 677899999999999864 5888775210
Q ss_pred hhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 017774 143 AEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVL 222 (366)
Q Consensus 143 ~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~ 222 (366)
...+|. + +..||+ ....+++.+++|..+++|+++|+++|++..| +.|.|||..+++++..
T Consensus 161 --------~~~~d~--~---iv~ep~------~~~~~v~~~~~G~~~~~v~~~G~~aHag~~p-~~g~nAi~~~~~~i~~ 220 (376)
T PRK07473 161 --------AARNKY--V---LVPEPG------RPDNGVVTGRYAIARFNLEATGRPSHAGATL-SEGRSAIREMARQILA 220 (376)
T ss_pred --------hccCCE--E---EEeCCC------CCCCCEEEECeeeEEEEEEEEeEcCCCCCCc-ccCcCHHHHHHHHHHH
Confidence 001221 1 344432 2223577889999999999999999997658 7899999999999999
Q ss_pred HHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHH
Q 017774 223 LERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQIC 302 (366)
Q Consensus 223 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~ 302 (366)
|+++.. ...++|++.|++ |.+.|+||++|++++++|....+..+++.+++.+.++
T Consensus 221 l~~~~~---------------------~~~~~~vg~i~g-g~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~~~~--- 275 (376)
T PRK07473 221 IDAMTT---------------------EDCTFSVGIVHG-GQWVNCVATTCTGEALSMAKRQADLDRGVARMLALSG--- 275 (376)
T ss_pred HHHhcC---------------------CCceEeEeeEEc-CCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHHhhC---
Confidence 987642 146889999999 8999999999999999999888777777777665543
Q ss_pred HHhCceEEEEee----------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEEEEe
Q 017774 303 EKRSVSCIVERK----------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCR 360 (366)
Q Consensus 303 ~~~~~~~~v~~~----------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~~g 360 (366)
...++++++... ....+.+.++++....+.++....++|++|+++|+.. +|++..|.|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~g~tDa~~~~~~giP~v~g~Gp 344 (376)
T PRK07473 276 TEDDVTFTVTRGVTRPVWEPDAGTMALYEKARAIAGQLGLSLPHGSAGGGSDGNFTGAMGIPTLDGLGV 344 (376)
T ss_pred cCCCeEEEEEccccCCCCCCChhHHHHHHHHHHHHHHcCCCCccccCccccHhhhHHhcCCCEEEeccC
Confidence 234666666532 1235777777766555655556667899999999876 999975544
No 24
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.3e-35 Score=284.67 Aligned_cols=291 Identities=20% Similarity=0.236 Sum_probs=214.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEE---cCcCCEEEEecCCCCCCCeEEEecccCccccC--------------------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~---~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g-------------------- 57 (366)
+|++|.++++||.++|+++||+++. ++.+|+++++ |. + +|+|+|+|||||||.+
T Consensus 17 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~-g~-~-~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iy 93 (375)
T PRK13009 17 VTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARR-GT-E-GPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLY 93 (375)
T ss_pred CCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEe-cC-C-CCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEE
Confidence 3678999999999999999999864 3467899988 54 2 4899999999999864
Q ss_pred --CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHH
Q 017774 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (366)
Q Consensus 58 --g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~ 135 (366)
|..|||++++++|++++.|++.+. .++++|.|++++|||.++ ..|++.+++.+
T Consensus 94 GrG~~D~Kgg~aa~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~~~----~~G~~~~~~~~------------------- 148 (375)
T PRK13009 94 GRGAADMKGSLAAFVVAAERFVAAHP--DHKGSIAFLITSDEEGPA----INGTVKVLEWL------------------- 148 (375)
T ss_pred ecCCccChHHHHHHHHHHHHHHHhcC--CCCceEEEEEEeeccccc----ccCHHHHHHHH-------------------
Confidence 556999999999999999999876 788999999999999753 24888875321
Q ss_pred HHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHH
Q 017774 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (366)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~ 215 (366)
.+.+. .+|.+ +..||... ......+..+.+|..+++|+++|+++|++. | +.+.||+..
T Consensus 149 ~~~~~------------~~d~~-----i~~ep~~~---~~~~~~i~~g~~g~~~~~i~v~G~~~Ha~~-p-~~g~nAi~~ 206 (375)
T PRK13009 149 KARGE------------KIDYC-----IVGEPTST---ERLGDVIKNGRRGSLTGKLTVKGVQGHVAY-P-HLADNPIHL 206 (375)
T ss_pred HHcCc------------CCCEE-----EEcCCCcc---cCCCCeEEEecceEEEEEEEEEecCcccCC-C-CcccCHHHH
Confidence 11111 12221 12333210 111112566889999999999999999997 8 899999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCC-CcceeCCeEEEEEEeeCCChHHHHHHHHHH
Q 017774 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPS-ASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (366)
Q Consensus 216 ~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~-~~NvIP~~~~~~~diR~~~~~~~~~~~~~i 294 (366)
++++|..|+........ +...+++++++.|++ |. ..|+||++|++.+|+|+.|.++.+++.++|
T Consensus 207 ~~~~l~~l~~~~~~~~~--------------~~~~~~~~~i~~i~~-G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i 271 (375)
T PRK13009 207 AAPALAELAATEWDEGN--------------EFFPPTSLQITNIDA-GTGATNVIPGELEAQFNFRFSTEHTAESLKARV 271 (375)
T ss_pred HHHHHHHHHhhhccCCC--------------ccCCCceEEEEEEec-CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHH
Confidence 99999999875321100 111357899999998 55 789999999999999999999999999999
Q ss_pred HHHHHHHHHHhCceEEEEee------e--hHHHHHHHHHHhhc-cCCCCCCCCCchhhHHHHHhhh-cCEEEEEEee
Q 017774 295 SNQLYQICEKRSVSCIVERK------L--KSASYAALKRMTGA-TQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 361 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~v~~~------~--~~~l~~~~~~~~g~-~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~~g~ 361 (366)
++.+++ .++++++... . ...+.+.+++++.+ .+.++....++|++|++++.+. +|++ .|.|+
T Consensus 272 ~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~g~tda~~~~~~g~p~v-~~Gp~ 343 (375)
T PRK13009 272 EAILDK----HGLDYTLEWTLSGEPFLTPPGKLVDAVVAAIEAVTGITPELSTSGGTSDARFIADYGAQVV-EFGPV 343 (375)
T ss_pred HHHHHh----cCCCeEEEEecCCCcccCCCcHHHHHHHHHHHHHhCCCceeeccCCCccHHHHHHcCCCeE-EeccC
Confidence 988863 3555555432 1 14455555555543 3444444456789999999987 6776 46554
No 25
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=3.9e-36 Score=285.13 Aligned_cols=267 Identities=17% Similarity=0.216 Sum_probs=207.1
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCcccc-------------CCCCCCHHHHHH
Q 017774 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD-------------AGIFDGSLGIIT 68 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~-------------gg~~D~k~gi~~ 68 (366)
|++|.++++||.++|+++|+++++++.+|++. .| .++|+|+||+||||. .|+.|||+|+++
T Consensus 26 s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~--~g----~~~lll~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~aa 99 (346)
T PRK00466 26 SGNETNATKFFEKISNELNLKLEILPDSNSFI--LG----EGDILLASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLIS 99 (346)
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEEecCCCcEe--cC----CCeEEEEeccccCCCCCCceeeCCEEEecCccccchHHHH
Confidence 67899999999999999999998887888764 23 268999999999996 388999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchhhhhh
Q 017774 69 AISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLL 148 (366)
Q Consensus 69 ~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~ 148 (366)
+|+|+++|++.+ .+|.|+|++|||+++ .|++.++.. ++
T Consensus 100 ~l~a~~~l~~~~------~~i~~~~~~dEE~g~-----~G~~~l~~~-----------------------~~-------- 137 (346)
T PRK00466 100 MIIAAWLLNEKG------IKVMVSGLADEESTS-----IGAKELVSK-----------------------GF-------- 137 (346)
T ss_pred HHHHHHHHHHcC------CCEEEEEEcCcccCC-----ccHHHHHhc-----------------------CC--------
Confidence 999999998875 258999999999863 588877521 11
Q ss_pred hccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhc
Q 017774 149 QLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCK 228 (366)
Q Consensus 149 ~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~ 228 (366)
.+|.+ +..|| .+ ...++.+++|..+++|+++|+++|+|. | + .|||..+++++.+|.+...
T Consensus 138 ----~~d~~-----i~~ep------~~-~~~i~~~~kG~~~~~i~v~G~~~Has~-p-~--~nAi~~~~~~l~~l~~~~~ 197 (346)
T PRK00466 138 ----NFKHI-----IVGEP------SN-GTDIVVEYRGSIQLDIMCEGTPEHSSS-A-K--SNLIVDISKKIIEVYKQPE 197 (346)
T ss_pred ----CCCEE-----EEcCC------CC-CCceEEEeeEEEEEEEEEEeeccccCC-C-C--cCHHHHHHHHHHHHHhccc
Confidence 12211 22333 22 124677899999999999999999998 6 4 5999999999999875432
Q ss_pred CCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCce
Q 017774 229 HPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVS 308 (366)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 308 (366)
. + ..+++|++.|++ |...|+||++|++++|+|+.|.++.+++.++|++.+++ ++
T Consensus 198 ~------------------~-~~~t~~~~~i~g-G~~~NvvP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~------~~ 251 (346)
T PRK00466 198 N------------------Y-DKPSIVPTIIRA-GESYNVTPAKLYLHFDVRYAINNKRDDLISEIKDKFQE------CG 251 (346)
T ss_pred c------------------C-CCCcceeeEEec-CCcCcccCCceEEEEEEEeCCCCCHHHHHHHHHHHHhh------Cc
Confidence 1 1 246889999999 89999999999999999999999999999999887764 33
Q ss_pred EEEEee-------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeC
Q 017774 309 CIVERK-------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLN 362 (366)
Q Consensus 309 ~~v~~~-------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~ 362 (366)
+++... ...++.+++.+++.+.+.++....++|++|+++|++..|.++.|.|+.
T Consensus 252 ~~~~~~~~~~~~~~~~~lv~~l~~a~~~~g~~~~~~~~~g~tD~~~~~~~~~~~v~fGpg~ 312 (346)
T PRK00466 252 LKIVDETPPVKVSINNPVVKALMRALLKQNIKPRLVRKAGTSDMNILQKITTSIATYGPGN 312 (346)
T ss_pred EeeccCCCCcccCCCCHHHHHHHHHHHHhCCCceEEecCCcCcHHHHHHhCCCEEEECCCC
Confidence 332221 235666666666655555555556789999999998877777777754
No 26
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=1.9e-35 Score=283.06 Aligned_cols=291 Identities=18% Similarity=0.226 Sum_probs=213.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc---CcCCEEEEecCCCCCCCeEEEecccCccccC--------------------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------------- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~---~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g-------------------- 57 (366)
.|++|.++++||.++|+++||+++.. +.+|+++++ |. +.|+|+|+||+||||.+
T Consensus 14 ~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~-g~--~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~y 90 (370)
T TIGR01246 14 VTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATR-GT--GEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLY 90 (370)
T ss_pred CCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEe-cC--CCcEEEEEccccccCCCCccccccCCCCcEEECCEEE
Confidence 37789999999999999999987643 467899986 43 24899999999999863
Q ss_pred --CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHH
Q 017774 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (366)
Q Consensus 58 --g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~ 135 (366)
|..|||++++++|.+++.|++.+. +++++|.|+|++|||.++ ..|++.+...+
T Consensus 91 GrG~~D~Kgg~a~~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~~~----~~G~~~~~~~~------------------- 145 (370)
T TIGR01246 91 GRGAADMKGSLAAFIVAAERFVKKNP--DHKGSISLLITSDEEGTA----IDGTKKVVETL------------------- 145 (370)
T ss_pred ecccccchHHHHHHHHHHHHHHHhcC--CCCCcEEEEEEeccccCC----CcCHHHHHHHH-------------------
Confidence 456999999999999999998876 788999999999999753 24888875211
Q ss_pred HHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHH
Q 017774 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTA 215 (366)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~ 215 (366)
.+.+. .+|.+ +..||+.... . ...++.+.+|..+++++++|+++|++. | +.+.||+..
T Consensus 146 ~~~~~------------~~d~~-----i~~ep~~~~~-~--~~~i~~~~~G~~~~~v~v~G~~~H~~~-p-~~g~nAi~~ 203 (370)
T TIGR01246 146 MARDE------------LIDYC-----IVGEPSSVKK-L--GDVIKNGRRGSITGNLTIKGIQGHVAY-P-HLANNPIHK 203 (370)
T ss_pred HhcCC------------CCCEE-----EEcCCCCccc-C--CceEEEeeeEEEEEEEEEEccCcccCC-c-ccCCCHHHH
Confidence 11111 12222 2334322111 0 112567899999999999999999998 8 899999999
Q ss_pred HHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCC-CcceeCCeEEEEEEeeCCChHHHHHHHHHH
Q 017774 216 AAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPS-ASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (366)
Q Consensus 216 ~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~-~~NvIP~~~~~~~diR~~~~~~~~~~~~~i 294 (366)
++++|..|+....... . ....+++++++.|++ |. ..|+||++|++.+|+|+.|.++.+++.+.|
T Consensus 204 ~~~~i~~l~~~~~~~~------~--------~~~~~~t~~i~~i~~-g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i 268 (370)
T TIGR01246 204 AAPALAELTAIKWDEG------N--------EFFPPTSLQITNIHA-GTGANNVIPGELYVQFNLRFSTEVSDEILKQRV 268 (370)
T ss_pred HHHHHHHHhhhhhccC------C--------ccCCCCceEeeeeec-CCCCCcccCCceEEEEEEecCCCCCHHHHHHHH
Confidence 9999999876532110 0 111357899999998 65 689999999999999999999999999999
Q ss_pred HHHHHHHHHHhCceEEEEee-----e---hHHHHHHHHHHhhc-cCCCCCCCCCchhhHHHHHhhh-cCEEEEEEee
Q 017774 295 SNQLYQICEKRSVSCIVERK-----L---KSASYAALKRMTGA-TQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 361 (366)
Q Consensus 295 ~~~~~~~~~~~~~~~~v~~~-----~---~~~l~~~~~~~~g~-~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~~g~ 361 (366)
++++++ ++++++++.. + .+.+.+++++++.+ .+..+....++|++|++++... +|++. |.|+
T Consensus 269 ~~~~~~----~~~~~~v~~~~~~~p~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~g~~d~~~~~~~g~p~~~-~Gp~ 340 (370)
T TIGR01246 269 EAILDQ----HGLDYDLEWSLSGEPFLTNDGKLIDKAREAIEETNGIKPELSTGGGTSDGRFIALMGAEVVE-FGPV 340 (370)
T ss_pred HHHHHH----cCCCEEEEEecCCcceeCCCCHHHHHHHHHHHHHhCCCCceecCCCCchHHHHHHcCCCEEE-ecCC
Confidence 887754 3555554432 1 23455555555443 2444444567889999999887 77764 5554
No 27
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-35 Score=287.28 Aligned_cols=294 Identities=23% Similarity=0.190 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHHcCCE-EEEcC----------cCCEEEEecCCCCCCCeEEEecccCccccC---------------
Q 017774 4 ASVRAGNLIRQWMEDAGLR-TWVDH----------LGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------- 57 (366)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~-~~~~~----------~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------------- 57 (366)
+|.++++||.++|+++|++ +++.. .+|++++++|..+ .++|+|+|||||||.+
T Consensus 28 ~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~-~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~ 106 (400)
T PRK13983 28 GEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDG-KRTLWIISHMDVVPPGDLSLWETDPFKPVVK 106 (400)
T ss_pred cHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCC-CCeEEEEeeccccCCCCcccccCCCCcceee
Confidence 5899999999999999998 76421 4789999977543 4799999999999963
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCc
Q 017774 58 -------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (366)
Q Consensus 58 -------g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~ 130 (366)
|+.|||+|++++|.++++|++.+. +++++|.|+|++|||.++ ..|++++.+...
T Consensus 107 ~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~----~~g~~~~~~~~~------------- 167 (400)
T PRK13983 107 DGKIYGRGSEDNGQGIVSSLLALKALMDLGI--RPKYNLGLAFVSDEETGS----KYGIQYLLKKHP------------- 167 (400)
T ss_pred CCEEEecCccCccchHHHHHHHHHHHHHhCC--CCCCcEEEEEEeccccCC----cccHHHHHhhcc-------------
Confidence 567999999999999999999987 889999999999999763 137887763110
Q ss_pred HHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCC
Q 017774 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQ 210 (366)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~ 210 (366)
+ .+.. .... +..+.+. +.+. -++.+++|..+++|+++|+++|+|. | +.|.
T Consensus 168 --------~-----------~~~~--~d~~--i~~~~~~---~~~~--~i~~~~~G~~~~~v~v~G~~~Hs~~-p-~~g~ 217 (400)
T PRK13983 168 --------E-----------LFKK--DDLI--LVPDAGN---PDGS--FIEIAEKSILWLKFTVKGKQCHAST-P-ENGI 217 (400)
T ss_pred --------c-----------ccCC--CCEE--EEecCCC---CCCc--eeEEeecceEEEEEEEEeEccccCC-C-CCCC
Confidence 0 0000 1111 1222221 1121 2567899999999999999999998 8 8999
Q ss_pred CHHHHHHHHHHHHHH-HhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHH
Q 017774 211 DPMTAAAELIVLLER-LCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRET 289 (366)
Q Consensus 211 NAi~~~a~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~ 289 (366)
||+..+++++..++. +...+.. .+..+. + ...+++++.+.+++...|+||++|++++|+|+.|.++.++
T Consensus 218 nAi~~~~~~i~~l~~~~~~~~~~---~~~~~~-----~--~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~ 287 (400)
T PRK13983 218 NAHRAAADFALELDEALHEKFNA---KDPLFD-----P--PYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDE 287 (400)
T ss_pred CHHHHHHHHHHHHHHHHHhhhcc---cccccC-----C--CCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHH
Confidence 999999999999987 4322100 000000 1 1346777888873368999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCceEEEEee----------ehHHHHHHHHHHhhc-cCCCCCCCCCchhhHHHHHhhh-cCEEEE
Q 017774 290 VLYELSNQLYQICEKRSVSCIVERK----------LKSASYAALKRMTGA-TQHEIPVIMSGAGHDAMAMSHL-TKVCSL 357 (366)
Q Consensus 290 ~~~~i~~~~~~~~~~~~~~~~v~~~----------~~~~l~~~~~~~~g~-~~~~~~~~~~~ggtD~~~~~~~-iP~~~~ 357 (366)
+.++|++.+++.+..++.++++... ..+++.+.+.+++.+ .+.++....++|++|++++.+. +|++.+
T Consensus 288 v~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~~~~~~g~td~~~~~~~gip~v~~ 367 (400)
T PRK13983 288 VLKDIKEIADEFEEEYGVKIEVEIVQREQAPPPTPPDSEIVKKLKRAIKEVRGIEPKVGGIGGGTVAAFLRKKGYPAVVW 367 (400)
T ss_pred HHHHHHHHHHHhccccCcceeEEEeeccCCccCCCCCcHHHHHHHHHHHHhcCCCceeeeecCcHHHHHHHHcCCCEEEe
Confidence 9999999998877666655555421 234455555554443 2334444456799999999876 999865
No 28
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=2.3e-35 Score=281.85 Aligned_cols=279 Identities=21% Similarity=0.242 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHcCCEEEEc------CcCCEEEEecCCCCCCCeEEEecccCccccC---------------------
Q 017774 5 SVRAGNLIRQWMEDAGLRTWVD------HLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (366)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~------~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------------------- 57 (366)
|.++++||.++|+++|++++++ .++|++++++++ +.++|+|+|||||||.+
T Consensus 17 ~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~--~~~~i~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~Gr 94 (364)
T TIGR01892 17 NVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPS--GAGGLALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGR 94 (364)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCC--CCCeEEEEcccccccCCCCcCCCCCCcceeeCCEEEec
Confidence 4799999999999999998754 246899998653 35899999999999853
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHH
Q 017774 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (366)
Q Consensus 58 g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~ 137 (366)
|+.|||++++++|+++++|++. +++++|.|+|++|||.++ .|++.++...
T Consensus 95 G~~D~Kg~~a~~l~a~~~l~~~----~~~~~v~~~~~~~EE~g~-----~G~~~~~~~~--------------------- 144 (364)
T TIGR01892 95 GTCDMKGFLACALAAAPDLAAE----QLKKPLHLALTADEEVGC-----TGAPKMIEAG--------------------- 144 (364)
T ss_pred CccccchHHHHHHHHHHHHHhc----CcCCCEEEEEEeccccCC-----cCHHHHHHhc---------------------
Confidence 6789999999999999999876 457899999999999763 5888876211
Q ss_pred CCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHH
Q 017774 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (366)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a 217 (366)
.+.+|. + +..+|+ + ..++.+++|..+++|+++|+++|++. | +.|.|||..++
T Consensus 145 -------------~~~~d~--~---i~~ep~------~--~~~~~~~~G~~~~~v~v~G~~~Hs~~-p-~~g~nAi~~~~ 196 (364)
T TIGR01892 145 -------------AGRPRH--A---IIGEPT------R--LIPVRAHKGYASAEVTVRGRSGHSSY-P-DSGVNAIFRAG 196 (364)
T ss_pred -------------CCCCCE--E---EECCCC------C--ceeEEeeceEEEEEEEEEcccccccC-C-ccCcCHHHHHH
Confidence 011221 1 222321 1 12445789999999999999999998 8 89999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCCcccccC-CCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHH
Q 017774 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESL-SSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSN 296 (366)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~ 296 (366)
+++..|+++...... ...+ .++ ...+++|++.|++ |...|+||++|++.+|+|+.|.++.+++.+.|++
T Consensus 197 ~~i~~l~~~~~~~~~-----~~~~----~~~~~~~~~~~i~~i~g-g~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~ 266 (364)
T TIGR01892 197 RFLQRLVHLADTLLR-----EDLD----EGFTPPYTTLNIGVIQG-GKAVNIIPGACEFVFEWRPIPGMDPEELLQLLET 266 (364)
T ss_pred HHHHHHHHHHHHhcc-----CCCC----ccCCCCCceEEEeeeec-CCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHH
Confidence 999999876432110 0000 011 1257999999999 8999999999999999999999999999999999
Q ss_pred HHHHHHH-HhCceEEEEee---------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEEE
Q 017774 297 QLYQICE-KRSVSCIVERK---------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLL 358 (366)
Q Consensus 297 ~~~~~~~-~~~~~~~v~~~---------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~ 358 (366)
.+++.+. .++++++++.. ...++.++++++++. .+. ..++++|+++|.+. +|++.+.
T Consensus 267 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~--~~~~~tD~~~~~~~gip~v~~G 334 (364)
T TIGR01892 267 IAQALVRDEPGFEVQIEVVSTDPGVNTEPDAELVAFLEELSGN---APE--VVSYGTEAPQFQELGAEAVVCG 334 (364)
T ss_pred HHHHHHhhCCCceEEEEEccCCCCcCCCCCCHHHHHHHHHhCC---CCc--eecccccHHHHHhCCCcEEEEC
Confidence 9987653 45666665432 245777888887764 222 24578999999887 9976533
No 29
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=7.7e-36 Score=290.84 Aligned_cols=305 Identities=21% Similarity=0.181 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEc----CcCCEEEEecCCCCCCCeEEEecccCccccC---------------------
Q 017774 3 PASVRAGNLIRQWMEDAGLRTWVD----HLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (366)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~----~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------------------- 57 (366)
++|.++++||.++|+++|++++++ +.+|++++++|.+++.++|+|+|||||||.+
T Consensus 22 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGr 101 (426)
T PRK07906 22 KGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEAADWSVHPFSGEIRDGYVWGR 101 (426)
T ss_pred chHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCcccCccCCCCceeeCCEEEec
Confidence 689999999999999999998754 3579999998765445899999999999862
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHH
Q 017774 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (366)
Q Consensus 58 g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~ 137 (366)
|+.|||++++++|+++++|++.+. .++++|.|+|++|||+++ ..|++.+.+....
T Consensus 102 G~~D~Kg~~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~----~~g~~~l~~~~~~------------------- 156 (426)
T PRK07906 102 GAVDMKDMDAMMLAVVRHLARTGR--RPPRDLVFAFVADEEAGG----TYGAHWLVDNHPE------------------- 156 (426)
T ss_pred CccccchHHHHHHHHHHHHHHcCC--CCCccEEEEEecCcccch----hhhHHHHHHHHHH-------------------
Confidence 677999999999999999999987 889999999999999864 3588887632110
Q ss_pred CCCCchhhhhhhccCCCCccceeeEeeccCCcccc--ccC-cccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHH
Q 017774 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLE--WVG-FPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (366)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~--~~~-~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~ 214 (366)
.+ +...+ +..|++.... +.. ....++.+++|..+++|+++|+++|+|. | + +.|||.
T Consensus 157 -------------~~--~~~~~---ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~-p-~-~~nAi~ 215 (426)
T PRK07906 157 -------------LF--EGVTE---AISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSM-V-N-DDNAVT 215 (426)
T ss_pred -------------hc--cchhe---EEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCC-C-C-CCCHHH
Confidence 00 00001 1223222100 000 1123667899999999999999999998 7 4 499999
Q ss_pred HHHHHHHHHHHHhcCCC---------CCcc--cCCCCCCcc-------cc---cC---CCCcEEEEEEEEecCCCcceeC
Q 017774 215 AAAELIVLLERLCKHPK---------DFLS--YDGRSNCST-------LE---SL---SSSLVCTVGEISSWPSASNVIP 270 (366)
Q Consensus 215 ~~a~~i~~l~~~~~~~~---------~~~~--~~~~~~~~~-------~~---~~---~~~~~~~~~~I~g~g~~~NvIP 270 (366)
.++++|..|+++..+.. ..+. ....+.+.. .. +. ...+++|++.|++ |.+.|+||
T Consensus 216 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~g-G~~~NviP 294 (426)
T PRK07906 216 RLAEAVARIGRHRWPLVLTPTVRAFLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKA-GYKVNVIP 294 (426)
T ss_pred HHHHHHHHHHhCCCCcccCHHHHHHHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEec-cCccccCC
Confidence 99999999976422100 0000 000000000 00 00 0146999999999 89999999
Q ss_pred CeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-------ehHHHHHHHHHHhhccC--CCCCCCCCch
Q 017774 271 GEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------LKSASYAALKRMTGATQ--HEIPVIMSGA 341 (366)
Q Consensus 271 ~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-------~~~~l~~~~~~~~g~~~--~~~~~~~~~g 341 (366)
++|++.+|+|+.|.++ +++.+.|++++. ..+++++... ...++.+.+++++.+.. ..+....++|
T Consensus 295 ~~~~~~~d~R~~p~~~-~~i~~~i~~~~~-----~~v~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~~~~~~~~~~~~g 368 (426)
T PRK07906 295 GTAEAVVDGRFLPGRE-EEFLATVDELLG-----PDVEREWVHRDPALETPFDGPLVDAMNAALLAEDPGARVVPYMLSG 368 (426)
T ss_pred CceEEEEEEeECCCCc-HHHHHHHHHHhC-----CCeEEEEecCCCCCCCCCCcHHHHHHHHHHHHHCCCCeEeeeeecc
Confidence 9999999999999875 556666655432 1344443322 23455555555544321 1122224568
Q ss_pred hhHHHHHhhh-cCEEEEEEee
Q 017774 342 GHDAMAMSHL-TKVCSLLCRL 361 (366)
Q Consensus 342 gtD~~~~~~~-iP~~~~~~g~ 361 (366)
+||+++|.+. +|+ +.|.|+
T Consensus 369 gtDa~~~~~~g~p~-~~~gp~ 388 (426)
T PRK07906 369 GTDAKAFSRLGIRC-YGFAPL 388 (426)
T ss_pred cCcHHHHHhcCCce-EEEecc
Confidence 8999999987 555 467664
No 30
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2e-35 Score=280.47 Aligned_cols=273 Identities=22% Similarity=0.206 Sum_probs=207.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcC---CEEEEecCCCCCCCeEEEecccCccccC-------------CCCCCHH
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLG---NVHGRVEGLNASAQALLIGSHLDTVVDA-------------GIFDGSL 64 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~g---nvia~~~g~~~~~~~i~l~~H~D~Vp~g-------------g~~D~k~ 64 (366)
.|++|.++++||.++|+++|++++++..+ |+++ + + .|+|+|+|||||||.. |+.|||+
T Consensus 17 ~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~---~--~-~~~i~l~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg 90 (347)
T PRK08652 17 PSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV---N--S-KAELFVEVHYDTVPVRAEFFVDGVYVYGTGACDAKG 90 (347)
T ss_pred CCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc---C--C-CCEEEEEccccccCCCCCCEEECCEEEeccchhhhH
Confidence 47899999999999999999998765444 4444 2 2 4899999999999862 7899999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchh
Q 017774 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (366)
Q Consensus 65 gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~ 144 (366)
+++++|+|++.|++. .++++|.|+|++|||.++ .|++.++..
T Consensus 91 ~~a~~l~a~~~l~~~----~~~~~v~~~~~~dEE~g~-----~G~~~~~~~----------------------------- 132 (347)
T PRK08652 91 GVAAILLALEELGKE----FEDLNVGIAFVSDEEEGG-----RGSALFAER----------------------------- 132 (347)
T ss_pred HHHHHHHHHHHHhhc----ccCCCEEEEEecCcccCC-----hhHHHHHHh-----------------------------
Confidence 999999999999865 346799999999999764 488877521
Q ss_pred hhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017774 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (366)
Q Consensus 145 ~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~ 224 (366)
..+| .+ ++.+|+ . ..+..+++|..+++|+++|+++|++. | +.+.|||.++++++..|+
T Consensus 133 -------~~~d--~~---i~~ep~------~--~~i~~~~~g~~~~~i~~~G~~~H~s~-p-~~g~nAi~~~a~~i~~l~ 190 (347)
T PRK08652 133 -------YRPK--MA---IVLEPT------D--LKVAIAHYGNLEAYVEVKGKPSHGAC-P-ESGVNAIEKAFEMLEKLK 190 (347)
T ss_pred -------cCCC--EE---EEecCC------C--CceeeecccEEEEEEEEEeeecccCC-C-CcCcCHHHHHHHHHHHHH
Confidence 1122 12 455543 1 13567899999999999999999987 8 799999999999999998
Q ss_pred HHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHH
Q 017774 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK 304 (366)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~ 304 (366)
.+...... .+ ..+++++.|++ |...|+||++|++++|+|+.|.++.+++.++|++++++
T Consensus 191 ~~~~~~~~--------------~~--~~~~~~~~i~g-g~~~nviP~~~~~~~diR~~~~~~~~~v~~~i~~~~~~---- 249 (347)
T PRK08652 191 ELLKALGK--------------YF--DPHIGIQEIIG-GSPEYSIPALCRLRLDARIPPEVEVEDVLDEIDPILDE---- 249 (347)
T ss_pred HHHHhhhc--------------cc--CCCCcceeeec-CCCCCccCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHh----
Confidence 76542110 01 12456677998 89999999999999999999999999999999888753
Q ss_pred hCceEEEEee-------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEEEEee
Q 017774 305 RSVSCIVERK-------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 361 (366)
Q Consensus 305 ~~~~~~v~~~-------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~~g~ 361 (366)
+++++++... ....+.+.+++++.+.+.++....++|++|+++|++. +|++. |.|+
T Consensus 250 ~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~g~~~~~~~~~g~tDa~~~~~~gip~v~-~Gpg 313 (347)
T PRK08652 250 YTVKYEYTEIWDGFELDEDEEIVQLLEKAMKEVGLEPEFTVMRSWTDAINFRYNGTKTVV-WGPG 313 (347)
T ss_pred cCceEEEeccCCcccCCCCCHHHHHHHHHHHHhCCCCCcCcCCccchhHHHHHCCCCEEE-ECCC
Confidence 4666655322 2355666666665544444444456789999999887 89864 5554
No 31
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=291.55 Aligned_cols=298 Identities=20% Similarity=0.224 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHHHHcCCEEE---Ec----CcCCEEEEecCCCCCCCeEEEecccCccccC------------------
Q 017774 3 PASVRAGNLIRQWMEDAGLRTW---VD----HLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------ 57 (366)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~---~~----~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g------------------ 57 (366)
++|.++++||.++|+++|++++ +. ..+|++++++|.++ .++|+|+|||||||.+
T Consensus 56 ~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~-~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~i 134 (472)
T PRK09133 56 GSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDP-KKPILLLAHMDVVEAKREDWTRDPFKLVEENGYF 134 (472)
T ss_pred cchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCC-CCcEEEEeecccCCCChhcCCCCCCcceEeCCEE
Confidence 5789999999999999999742 22 35799999987654 3899999999999853
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecccc-CcccCCCCcchHHhhcccccccccccCCCCCcHHH
Q 017774 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEE-GVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLD 133 (366)
Q Consensus 58 ---g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE-~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~ 133 (366)
|+.|||++++++|+++++|++.+. .++++|.|++++||| ++ ..|++.+.+....
T Consensus 135 yGRGa~D~Kg~~aa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~~g-----~~G~~~l~~~~~~--------------- 192 (472)
T PRK09133 135 YGRGTSDDKADAAIWVATLIRLKREGF--KPKRDIILALTGDEEGTP-----MNGVAWLAENHRD--------------- 192 (472)
T ss_pred EecCcccchHHHHHHHHHHHHHHhcCC--CCCCCEEEEEECccccCc-----cchHHHHHHHHhh---------------
Confidence 677999999999999999999886 789999999999999 44 3588877631100
Q ss_pred HHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccc-cccCc--ccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCC
Q 017774 134 ALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVL-EWVGF--PLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQ 210 (366)
Q Consensus 134 ~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~-~~~~~--~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~ 210 (366)
.++++ ++ +. |++... ...+. ...+..+++|..+++|+++|+++|+|. | + +.
T Consensus 193 -----------------~~~~~--~~---i~-e~~~~~~~~~gept~~~i~~g~kG~~~~~i~v~G~~~Hss~-p-~-~~ 246 (472)
T PRK09133 193 -----------------LIDAE--FA---LN-EGGGGTLDEDGKPVLLTVQAGEKTYADFRLEVTNPGGHSSR-P-T-KD 246 (472)
T ss_pred -----------------ccCeE--EE---EE-CCCccccCCCCCceEEEeeeecceeEEEEEEEecCCCCCCC-C-C-CC
Confidence 01111 11 34 543210 00011 122557899999999999999999998 7 5 58
Q ss_pred CHHHHHHHHHHHHHHHhcCCC-CCcc-----------------------cCC---------CCCCcccccCCCCcEEEEE
Q 017774 211 DPMTAAAELIVLLERLCKHPK-DFLS-----------------------YDG---------RSNCSTLESLSSSLVCTVG 257 (366)
Q Consensus 211 NAi~~~a~~i~~l~~~~~~~~-~~~~-----------------------~~~---------~~~~~~~~~~~~~~~~~~~ 257 (366)
|||..++++|..|+.+..... ..+. ... ..++. ..+. ..+++|++
T Consensus 247 nAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~t~~~~ 324 (472)
T PRK09133 247 NAIYRLAAALSRLAAYRFPVMLNDVTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPS-YNAM-LRTTCVAT 324 (472)
T ss_pred ChHHHHHHHHHHHhhCCCCCccCCccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcc-hhhe-eeeeEEee
Confidence 999999999999976421100 0000 000 00000 0011 35799999
Q ss_pred EEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee--------ehHHHHHHHHHHhhc
Q 017774 258 EISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK--------LKSASYAALKRMTGA 329 (366)
Q Consensus 258 ~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~--------~~~~l~~~~~~~~g~ 329 (366)
.|++ |.+.|+||++|++++|+|+.|.++.+++.++|+++++. .++++++... ....+.++++++.++
T Consensus 325 ~i~g-G~~~NvVP~~a~~~lDiR~~p~~~~e~v~~~I~~~i~~----~~v~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 399 (472)
T PRK09133 325 MLEG-GHAENALPQRATANVNCRIFPGDTIEAVRATLKQVVAD----PAIKITRIGDPSPSPASPLRPDIMKAVEKLTAA 399 (472)
T ss_pred EEec-CCcCccCCCceEEEEEEEeCCchhHHHHHHHHHHHhcC----CCEEEEEccCCCCCCCCCCCcHHHHHHHHHHHH
Confidence 9999 89999999999999999999999999999999887753 3445543211 345677777776655
Q ss_pred c--CCCCCCCCCchhhHHHHHhhh-cCEEE
Q 017774 330 T--QHEIPVIMSGAGHDAMAMSHL-TKVCS 356 (366)
Q Consensus 330 ~--~~~~~~~~~~ggtD~~~~~~~-iP~~~ 356 (366)
. +.......++|+||++++.+. +|++.
T Consensus 400 ~~~g~~~~~~~~~ggtDa~~~~~~gip~~~ 429 (472)
T PRK09133 400 MWPGVPVIPSMSTGATDGRYLRAAGIPTYG 429 (472)
T ss_pred HCCCCceeccccccccchHHHHhcCCCcee
Confidence 3 433334457899999999876 89863
No 32
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=6.7e-35 Score=282.60 Aligned_cols=281 Identities=17% Similarity=0.171 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEcCcCCEEEEecCCC-CCCCeEEEecccCccccC-----------------------
Q 017774 3 PASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLN-ASAQALLIGSHLDTVVDA----------------------- 57 (366)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-~~~~~~gnvia~~~g~~-~~~~~i~l~~H~D~Vp~g----------------------- 57 (366)
.+|.++++||+++|+++|++ ++++..+|++++++|+. ++.|+|+|+|||||||..
T Consensus 29 ~~~~~~a~~l~~~l~~~G~~~~~~~~~~~v~~~~~g~~~~~~~~i~l~~H~D~vp~~~~~~~~p~~~~~~~~~~~~~~~~ 108 (408)
T PRK05469 29 EGQWDLAKLLVEELKELGLQDVTLDENGYVMATLPANVDKDVPTIGFIAHMDTAPDFSGKNVKPQIIENYDGGDIALGDG 108 (408)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEECCCeEEEEEecCCCCCCCCeEEEEEeccCCCCCCCCCCCCEEeccCCCcceecCCC
Confidence 45899999999999999996 77788889999998752 235999999999999640
Q ss_pred ------------------------CC----CCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcch
Q 017774 58 ------------------------GI----FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGS 109 (366)
Q Consensus 58 ------------------------g~----~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs 109 (366)
|. .|||+|++++|+|+++|++.+. .++++|.|+|++|||.+ .|+
T Consensus 109 ~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~--~~~g~v~~~f~~dEE~g------~Ga 180 (408)
T PRK05469 109 NEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE--IKHGDIRVAFTPDEEIG------RGA 180 (408)
T ss_pred ceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC--CCCCCEEEEEecccccC------CCH
Confidence 33 8999999999999999998865 67899999999999975 288
Q ss_pred HHhhcccccccccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceE
Q 017774 110 AALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTR 189 (366)
Q Consensus 110 ~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~ 189 (366)
+.++. + .+..+ .+ +++++.+ .+ .+..+.+|..+
T Consensus 181 ~~~~~------------------~-----------------~~~~~--~~---~~~~~~~----~g---~~~~~~~g~~~ 213 (408)
T PRK05469 181 DKFDV------------------E-----------------KFGAD--FA---YTVDGGP----LG---ELEYENFNAAS 213 (408)
T ss_pred HHhhh------------------h-----------------hcCCc--EE---EEecCCC----cc---eEEeccCceeE
Confidence 77641 0 00011 11 2333221 11 13345788999
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCccee
Q 017774 190 LKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVI 269 (366)
Q Consensus 190 ~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvI 269 (366)
++|+++|+++|++.+| +.+.|||..+++++..|+....... +.....+++++.|++ |
T Consensus 214 ~~i~v~Gk~~Ha~~~p-~~g~nAi~~~~~~i~~l~~~~~~~~---------------~~~~~~~i~~g~i~g-g------ 270 (408)
T PRK05469 214 AKITIHGVNVHPGTAK-GKMVNALLLAADFHAMLPADETPET---------------TEGYEGFYHLTSIKG-T------ 270 (408)
T ss_pred EEEEEeeecCCCCCCc-ccccCHHHHHHHHHHhCCCCCCCCC---------------CCCceEEEEEEEEEE-c------
Confidence 9999999999988768 8999999999999998775432100 000134578888887 3
Q ss_pred CCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHh-CceEEEEee-----------ehHHHHHHHHHHhhccCCCCCCC
Q 017774 270 PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKR-SVSCIVERK-----------LKSASYAALKRMTGATQHEIPVI 337 (366)
Q Consensus 270 P~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~v~~~-----------~~~~l~~~~~~~~g~~~~~~~~~ 337 (366)
|++|++++|+|+.+.++.+++.++|++++++++..+ ++++++.+. ....+.+.++++..+.+..+...
T Consensus 271 p~~~~i~~diR~~~~e~~e~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~g~~~~~~ 350 (408)
T PRK05469 271 VEEAELSYIIRDFDREGFEARKALMQEIAKKVNAKYGEGRVELEIKDQYYNMREKIEPHPHIVDLAKQAMEDLGIEPIIK 350 (408)
T ss_pred cceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeehhhhhhhhhcCCHHHHHHHHHHHHHcCCCcEEe
Confidence 899999999999999999999999999999988877 466655432 23566677777666555444444
Q ss_pred CCchhhHHHHHhhh-cCEEEEEEee
Q 017774 338 MSGAGHDAMAMSHL-TKVCSLLCRL 361 (366)
Q Consensus 338 ~~~ggtD~~~~~~~-iP~~~~~~g~ 361 (366)
.+.|++|+++|++. +|+++++.|.
T Consensus 351 ~~~ggtD~~~~~~~giP~v~~gpG~ 375 (408)
T PRK05469 351 PIRGGTDGSQLSFMGLPCPNIFTGG 375 (408)
T ss_pred cCCCcccHHHHhhCCCceEEECcCc
Confidence 56799999999976 9999877664
No 33
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.3e-35 Score=282.72 Aligned_cols=282 Identities=21% Similarity=0.240 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHcCCEEEEc------CcCCEEEEecCCCCCCCeEEEecccCccccC---------------------
Q 017774 5 SVRAGNLIRQWMEDAGLRTWVD------HLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (366)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~------~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------------------- 57 (366)
|.++++||.++|+++|+++++. ++.|+++++ |.. .++|+|+|||||||.+
T Consensus 31 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~-g~~--~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~Gr 107 (383)
T PRK05111 31 NRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASL-GSG--EGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGL 107 (383)
T ss_pred hHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEe-CCC--CCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEec
Confidence 5789999999999999998653 235899999 433 3689999999999852
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHH
Q 017774 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (366)
Q Consensus 58 g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~ 137 (366)
|+.|||++++++|++++.|++. .++++|.|+|++|||.++ .|++++++.
T Consensus 108 G~~D~Kg~~a~~l~a~~~l~~~----~~~~~i~~~~~~~EE~g~-----~G~~~~~~~---------------------- 156 (383)
T PRK05111 108 GTADMKGFFAFILEALRDIDLT----KLKKPLYILATADEETSM-----AGARAFAEA---------------------- 156 (383)
T ss_pred ccccccHHHHHHHHHHHHHhhc----CCCCCeEEEEEeccccCc-----ccHHHHHhc----------------------
Confidence 6789999999999999999875 457899999999999763 588887621
Q ss_pred CCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHH
Q 017774 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (366)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a 217 (366)
+ .+.+|. + +..||+ . ..++.+++|..+++|+++|+++|+|. | +.|.|||..++
T Consensus 157 -~-----------~~~~d~--~---i~~ep~------~--~~~~~~~~G~~~~~i~v~G~~~H~~~-p-~~g~nai~~~~ 209 (383)
T PRK05111 157 -T-----------AIRPDC--A---IIGEPT------S--LKPVRAHKGHMSEAIRITGQSGHSSD-P-ALGVNAIELMH 209 (383)
T ss_pred -C-----------CCCCCE--E---EEcCCC------C--CceeecccceEEEEEEEEeechhccC-C-ccCcCHHHHHH
Confidence 0 011221 1 222321 1 12356799999999999999999998 8 89999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHH
Q 017774 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQ 297 (366)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~ 297 (366)
+++..|+.+...+.... ..+.+ .. ..+++|++.|++ |...|+||++|++.+|+|+.|.++.+++.++|++.
T Consensus 210 ~~i~~l~~~~~~~~~~~-~~~~~------~~-~~~t~~i~~i~g-g~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~~ 280 (383)
T PRK05111 210 DVIGELLQLRDELQERY-HNPAF------TV-PYPTLNLGHIHG-GDAPNRICGCCELHFDIRPLPGMTLEDLRGLLREA 280 (383)
T ss_pred HHHHHHHHHHHHHhccC-CCccC------CC-CCCceeEeeeec-CCcCcccCCceEEEEEEecCCCCCHHHHHHHHHHH
Confidence 99999987643211000 00000 01 357899999999 89999999999999999999999999999999999
Q ss_pred HHHHHHHhCceEEEEee----------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEEEEee
Q 017774 298 LYQICEKRSVSCIVERK----------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 361 (366)
Q Consensus 298 ~~~~~~~~~~~~~v~~~----------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~~g~ 361 (366)
+++++..+++++++... ...++.++++++++. .+. ..++++|++++.+. +|+++++.|.
T Consensus 281 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~---~~~--~~~~~~Da~~~~~~g~p~v~~G~g~ 350 (383)
T PRK05111 281 LAPVSERWPGRITVAPLHPPIPGYECPADHQLVRVVEKLLGH---KAE--VVNYCTEAPFIQQLGCPTLVLGPGS 350 (383)
T ss_pred HHHHHhhCCCeEEEeccccCCCCcCCCCCCHHHHHHHHHhCC---CCc--eeeeeccHHHHHhcCCCEEEECCCc
Confidence 99888888877776531 346677788877653 222 23578999999877 8998876653
No 34
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=2.7e-35 Score=284.79 Aligned_cols=298 Identities=16% Similarity=0.136 Sum_probs=214.0
Q ss_pred HHHHHHHHHHHHHHHcCCEEEE----cCcCCEEEEecCCCCCCCeEEEecccCccccC----------------------
Q 017774 4 ASVRAGNLIRQWMEDAGLRTWV----DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (366)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~----~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------------- 57 (366)
+|.++++||.++|+++|++++. ....|++++++|+++..|+|+|+|||||||.+
T Consensus 29 ~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGr 108 (400)
T TIGR01880 29 DYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYAR 108 (400)
T ss_pred cHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCcccCccCCccceecCCCeEEEc
Confidence 4788999999999999998753 23457999998755434899999999999852
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHH
Q 017774 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (366)
Q Consensus 58 g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~ 137 (366)
|+.|||++++++|++++.|++.+. +++++|.|+|++|||.++ ..|++.+++.
T Consensus 109 G~~D~K~~~aa~l~a~~~l~~~~~--~~~~~v~l~~~~dEE~g~----~~G~~~~~~~---------------------- 160 (400)
T TIGR01880 109 GAQDMKCVGVQYLEAVRNLKASGF--KFKRTIHISFVPDEEIGG----HDGMEKFAKT---------------------- 160 (400)
T ss_pred ccccccHHHHHHHHHHHHHHHcCC--CCCceEEEEEeCCcccCc----HhHHHHHHHh----------------------
Confidence 556999999999999999999886 788999999999999863 2488877521
Q ss_pred CCCCchhhhhhhccCC-CCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHH
Q 017774 138 NSIDIAEESLLQLKYD-PASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAA 216 (366)
Q Consensus 138 ~g~~~~~~~~~~~~~~-~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~ 216 (366)
+ .+. .+..+ .++.+.. ++.+ ...+..+++|..+++|+++|+++|++. | . ..||+..+
T Consensus 161 -~-----------~~~~~~~~~-----~~d~g~~-~~~~-~~~i~~~~kG~~~~~l~v~G~~~Hs~~-~-~-~~nai~~l 218 (400)
T TIGR01880 161 -D-----------EFKALNLGF-----ALDEGLA-SPDD-VYRVFYAERVPWWVVVTAPGNPGHGSK-L-M-ENTAMEKL 218 (400)
T ss_pred -h-----------hccCCceEE-----EEcCCCc-cccc-ccceeEEeeEEEEEEEEEecCCCCCCC-C-C-CCCHHHHH
Confidence 0 000 11111 1222211 1111 123667899999999999999999998 5 2 47999999
Q ss_pred HHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHH
Q 017774 217 AELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSN 296 (366)
Q Consensus 217 a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~ 296 (366)
++++..|+.+.......+...+.. .....+++|++.|++ |...|+||++|++.+|+|+.|.++.+++.+.|++
T Consensus 219 ~~~i~~l~~~~~~~~~~~~~~~~~------~~~~~~t~~v~~i~g-G~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~ 291 (400)
T TIGR01880 219 EKSVESIRRFRESQFQLLQSNPDL------AIGDVTSVNLTKLKG-GVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDE 291 (400)
T ss_pred HHHHHHHHHhhHHHHHHHhcCccc------cccccceeecceecc-CCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHH
Confidence 999998876532100000000000 111247999999999 8999999999999999999999999999999999
Q ss_pred HHHHHHHHhCceEEEEee----------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEEEEee
Q 017774 297 QLYQICEKRSVSCIVERK----------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCRL 361 (366)
Q Consensus 297 ~~~~~~~~~~~~~~v~~~----------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~~g~ 361 (366)
++++. ..++++++... ...++.+++++++.+.+..+....++|++|++++++. +|++ .|.|+
T Consensus 292 ~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~~~~~~~~~~g~tDa~~~~~~gip~v-~fgp~ 364 (400)
T TIGR01880 292 WCADA--GEGVTYEFSQHSGKPLVTPHDDSNPWWVAFKDAVKEMGCTFKPEILPGSTDSRYIRAAGVPAL-GFSPM 364 (400)
T ss_pred HHhcc--CCceEEEEeecCCCCCCCCCCCCCHHHHHHHHHHHHcCCeecceeecCcchHHHHHhCCCCeE-EECCc
Confidence 88763 23555555322 1346667777766654433333457899999999987 9995 56654
No 35
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3.3e-35 Score=282.88 Aligned_cols=288 Identities=20% Similarity=0.249 Sum_probs=214.1
Q ss_pred CHHH-HHHHHHHHHHHHHcCCEEEEc-----CcCCEEEEecCCCCCCCeEEEecccCccccC------------------
Q 017774 2 SPAS-VRAGNLIRQWMEDAGLRTWVD-----HLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------ 57 (366)
Q Consensus 2 s~~E-~~~~~~l~~~l~~~G~~~~~~-----~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g------------------ 57 (366)
|++| .++++||.++|+++|+++++. ..+|+++++++. + .|+|+|+|||||||.+
T Consensus 20 s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~-~-~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i 97 (385)
T PRK07522 20 SRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPA-D-RGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRL 97 (385)
T ss_pred CCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCC-C-CCeEEEEeecccccCCCCCCCCCCCceEEECCEE
Confidence 4565 599999999999999997642 246899998653 2 4899999999999852
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHH
Q 017774 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (366)
Q Consensus 58 ---g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~ 134 (366)
|+.|||++++++|+++++|++. +++++|.|+|++|||.++ .|+++++....
T Consensus 98 ~GrG~~D~Kg~~a~~l~a~~~l~~~----~~~~~i~~~~~~dEE~g~-----~G~~~l~~~~~----------------- 151 (385)
T PRK07522 98 YGRGTCDMKGFIAAALAAVPELAAA----PLRRPLHLAFSYDEEVGC-----LGVPSMIARLP----------------- 151 (385)
T ss_pred EeccccccchHHHHHHHHHHHHHhC----CCCCCEEEEEEeccccCC-----ccHHHHHHHhh-----------------
Confidence 6789999999999999999886 457899999999999753 59998863211
Q ss_pred HHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHH
Q 017774 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (366)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~ 214 (366)
+.+ +.+|.+ +..+| .+ ..++.+++|..+++|+++|+++|+|. | +.+.||+.
T Consensus 152 --~~~------------~~~d~~-----i~~ep------~~--~~~~~~~~G~~~~~i~v~G~~~Hs~~-p-~~g~nAi~ 202 (385)
T PRK07522 152 --ERG------------VKPAGC-----IVGEP------TS--MRPVVGHKGKAAYRCTVRGRAAHSSL-A-PQGVNAIE 202 (385)
T ss_pred --hcC------------CCCCEE-----EEccC------CC--CeeeeeecceEEEEEEEEeeccccCC-C-ccCcCHHH
Confidence 001 112211 12222 11 23667899999999999999999998 6 68999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHH
Q 017774 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYEL 294 (366)
Q Consensus 215 ~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i 294 (366)
.++++|..|+++..+.......++.+ . .+.++++++.|++ |...|+||++|++.+|+|+.|.++.+++.+.|
T Consensus 203 ~~~~~i~~l~~~~~~~~~~~~~~~~~------~-~~~~t~~i~~i~g-G~~~nviP~~a~~~~diR~~~~~~~~~i~~~i 274 (385)
T PRK07522 203 YAARLIAHLRDLADRLAAPGPFDALF------D-PPYSTLQTGTIQG-GTALNIVPAECEFDFEFRNLPGDDPEAILARI 274 (385)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcCC------C-CCcceeEEeeeec-CccccccCCceEEEEEEccCCCCCHHHHHHHH
Confidence 99999999988653211000000000 0 0246899999998 89999999999999999999999999999999
Q ss_pred HHHHHH------HHHHhCceEEEEee---------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEEE
Q 017774 295 SNQLYQ------ICEKRSVSCIVERK---------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLL 358 (366)
Q Consensus 295 ~~~~~~------~~~~~~~~~~v~~~---------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~ 358 (366)
++.+++ .+...++++++... -.+++.++++++.++.. .. ...+++|+++|+.. +|++.+.
T Consensus 275 ~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~-~~~~~td~~~~~~~gip~v~~G 350 (385)
T PRK07522 275 RAYAEAELLPEMRAVHPEAAIEFEPLSAYPGLDTAEDAAAARLVRALTGDND---LR-KVAYGTEAGLFQRAGIPTVVCG 350 (385)
T ss_pred HHHHHhhcchhhhhhcCCCcEEEEeccCCCCCCCCCCcHHHHHHHHHhCCCC---cc-eEeeecchHHhccCCCCEEEEC
Confidence 999877 23445677766542 23678888888776432 11 24589999999876 8997543
No 36
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.1e-34 Score=280.01 Aligned_cols=285 Identities=23% Similarity=0.243 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcCcC------------CEEEEecCCCCCCCeEEEecccCccccC-------------
Q 017774 3 PASVRAGNLIRQWMEDAGLRTWVDHLG------------NVHGRVEGLNASAQALLIGSHLDTVVDA------------- 57 (366)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~~~g------------nvia~~~g~~~~~~~i~l~~H~D~Vp~g------------- 57 (366)
.+|.++++||.++|+++|++++++..+ |+++.. +.+ .|+|+|+|||||||.+
T Consensus 26 ~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~ill~~HlDtvp~~~~~~~~~Pf~~~~ 102 (394)
T PRK08651 26 ENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARR-GSG--NPHLHFNGHYDVVPPGEGWSVNVPFEPKV 102 (394)
T ss_pred cCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEe-CCC--CceEEEEeeeeeecCCCCccccCCCCcEE
Confidence 567899999999999999988764322 356654 333 3899999999999863
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCC
Q 017774 58 --------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGV 129 (366)
Q Consensus 58 --------g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~ 129 (366)
|..|||++++++|++++.|++. . +++|.|+|++|||+++ .|+++++...
T Consensus 103 ~~~~~~grG~~D~k~~~~~~l~a~~~l~~~----~-~~~v~~~~~~~EE~g~-----~G~~~~~~~~------------- 159 (394)
T PRK08651 103 KDGKVYGRGASDMKGGIAALLAAFERLDPA----G-DGNIELAIVPDEETGG-----TGTGYLVEEG------------- 159 (394)
T ss_pred ECCEEEecCccccchHHHHHHHHHHHHHhc----C-CCCEEEEEecCccccc-----hhHHHHHhcc-------------
Confidence 4579999999999999999875 3 7899999999999863 5888876210
Q ss_pred cHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCC
Q 017774 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMR 209 (366)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g 209 (366)
.+.+|. + +..++. +. ..++.+++|..+++|+++|+++|++. | +.+
T Consensus 160 ---------------------~~~~d~--~---i~~~~~------~~-~~i~~~~~G~~~~~i~v~G~~~H~~~-p-~~g 204 (394)
T PRK08651 160 ---------------------KVTPDY--V---IVGEPS------GL-DNICIGHRGLVWGVVKVYGKQAHAST-P-WLG 204 (394)
T ss_pred ---------------------CCCCCE--E---EEecCC------CC-CceEEecccEEEEEEEEEEeccccCC-C-ccc
Confidence 011221 1 122321 11 13567899999999999999999998 8 799
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEE--EEecCCCcceeCCeEEEEEEeeCCChHHH
Q 017774 210 QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGE--ISSWPSASNVIPGEVTFTVDLRAIDDAGR 287 (366)
Q Consensus 210 ~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--I~g~g~~~NvIP~~~~~~~diR~~~~~~~ 287 (366)
.|||..+++++.+|+....+.... ..+. ++.....+++++. |++ |...|+||++|++.+|+|+.|.++.
T Consensus 205 ~nAi~~~~~~i~~l~~~~~~~~~~----~~~~----~~~~~~~~~~ig~~~i~g-G~~~nviP~~a~~~~diR~~~~~~~ 275 (394)
T PRK08651 205 INAFEAAAKIAERLKSSLSTIKSK----YEYD----DERGAKPTVTLGGPTVEG-GTKTNIVPGYCAFSIDRRLIPEETA 275 (394)
T ss_pred cCHHHHHHHHHHHHHHHHHhhhcc----cccc----ccccCCCceeecceeeeC-CCCCCccCCEEEEEEEeeeCCCCCH
Confidence 999999999999998754321100 0000 0111356788888 998 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCceEEEEee---------ehHHHHHHHHHHhhc-cCCCCCCCCCchhhHHHHHhhh-cCEEE
Q 017774 288 ETVLYELSNQLYQICEKRSVSCIVERK---------LKSASYAALKRMTGA-TQHEIPVIMSGAGHDAMAMSHL-TKVCS 356 (366)
Q Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~v~~~---------~~~~l~~~~~~~~g~-~~~~~~~~~~~ggtD~~~~~~~-iP~~~ 356 (366)
+++.++|++.+++.+.++++++++... ....+.+.+++++.+ ++..+....+.|++|+++|++. +|++.
T Consensus 276 e~i~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~g~~~~~~~~~g~tD~~~~~~~gip~v~ 355 (394)
T PRK08651 276 EEVRDELEALLDEVAPELGIEVEFEITPFSEAFVTDPDSELVKALREAIREVLGVEPKKTISLGGTDARFFGAKGIPTVV 355 (394)
T ss_pred HHHHHHHHHHHHHHhhccCCCeeEEEecccCCccCCCCCHHHHHHHHHHHHHhCCCCceeeecCcccHHHHhhCCCcEEE
Confidence 999999999999988888866666533 122455555555443 3433333456799999999988 99964
Q ss_pred E
Q 017774 357 L 357 (366)
Q Consensus 357 ~ 357 (366)
+
T Consensus 356 ~ 356 (394)
T PRK08651 356 Y 356 (394)
T ss_pred E
Confidence 4
No 37
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=1.7e-34 Score=279.51 Aligned_cols=281 Identities=15% Similarity=0.110 Sum_probs=203.3
Q ss_pred CHHHHHHHHHHHHHHHHcCCE-EEEcC-cCCEEEEecCCCCC-CCeEEEecccCcccc-------------CC-------
Q 017774 2 SPASVRAGNLIRQWMEDAGLR-TWVDH-LGNVHGRVEGLNAS-AQALLIGSHLDTVVD-------------AG------- 58 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~-~~~~~-~gnvia~~~g~~~~-~~~i~l~~H~D~Vp~-------------gg------- 58 (366)
|++| +++++|.++|+++|++ +++|+ .|||+|+++|+.+. .|+|+|.+|||||+. +|
T Consensus 30 ~~~~-~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmDTv~~~~~~v~p~~~~~~~g~~~~~~~ 108 (410)
T TIGR01882 30 PGQL-TFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVDTADFNGENVNPQIIENYDGESIIQLG 108 (410)
T ss_pred HhHH-HHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecccCcCCCCCCCCEEEecCCCceeeecC
Confidence 3556 7999999999999997 99998 89999999876431 399999999999984 11
Q ss_pred -------------------------------CCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCc
Q 017774 59 -------------------------------IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFL 107 (366)
Q Consensus 59 -------------------------------~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~ 107 (366)
+.|||+|+|++|+++++|++.+. .++++|.|+|++|||.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~--~~~g~I~~~ft~dEE~g~------ 180 (410)
T TIGR01882 109 DLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE--IKHGTIRVAFTPDEEIGR------ 180 (410)
T ss_pred CCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC--CCCCCEEEEEECcccCCc------
Confidence 25999999999999999998742 468999999999999853
Q ss_pred chHHhhcccccccccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeec
Q 017774 108 GSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQ 187 (366)
Q Consensus 108 Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~ 187 (366)
|++.+... .+..+ .+ +++.+. +.+. +.....|.
T Consensus 181 Ga~~l~~~-----------------------------------~~~~~--~~---~~i~ge----p~g~---i~~~~~g~ 213 (410)
T TIGR01882 181 GAHKFDVK-----------------------------------DFNAD--FA---YTVDGG----PLGE---LEYETFSA 213 (410)
T ss_pred Ccchhhhh-----------------------------------hcCcc--EE---EEeCCC----CCCe---EEEccccc
Confidence 77765310 01111 12 233321 1221 33335689
Q ss_pred eEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcc
Q 017774 188 TRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASN 267 (366)
Q Consensus 188 ~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~N 267 (366)
.+++|+++|+++|++.++ +.+.||+..+.+++..+..... +. .++.+.+.+++ + ..|
T Consensus 214 ~~~~I~v~Gk~aHa~~~~-~~g~nAi~~a~~~~~~l~~~~~------------------~~--~t~~~~g~i~~-g-~i~ 270 (410)
T TIGR01882 214 AAAKITIQGNNVHPGTAK-GKMINAAQIAIDLHNLLPEDDR------------------PE--YTEGREGFFHL-L-SID 270 (410)
T ss_pred eEEEEEEEEEecCcccCh-HHHHHHHHHHHHHHHhcCCcCC------------------Cc--cccceeEEEEE-E-eEE
Confidence 999999999999999866 6899999999988776543211 11 11122345565 3 467
Q ss_pred eeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCc---eEEEEee---------ehHHHHHHHHHHhhccCCCCC
Q 017774 268 VIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV---SCIVERK---------LKSASYAALKRMTGATQHEIP 335 (366)
Q Consensus 268 vIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~v~~~---------~~~~l~~~~~~~~g~~~~~~~ 335 (366)
.||++|++.+|+|+.+.++.+++.++|++++++++..+++ ++++... -...+.+.+++++.+.+..+.
T Consensus 271 giPd~a~l~~diR~~~~e~~e~i~~~i~~i~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~lv~~~~~a~~~~G~~~~ 350 (410)
T TIGR01882 271 GTVEEAKLHYIIRDFEKENFQERKELMKRIVEKMNNEYGQDRIKLDMNDQYYNMAEKIEKVMEIVDIAKQAMENLGIEPK 350 (410)
T ss_pred EecCEEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEEeeecChhhccCCCHHHHHHHHHHHHHhCCCCc
Confidence 7999999999999999999999999999999998887763 3433221 134556666666555454444
Q ss_pred CCCCchhhHHHHHhhh-cCEEEEEEee
Q 017774 336 VIMSGAGHDAMAMSHL-TKVCSLLCRL 361 (366)
Q Consensus 336 ~~~~~ggtD~~~~~~~-iP~~~~~~g~ 361 (366)
...+.||||+++|+.. +|++.++.|.
T Consensus 351 ~~~~~ggtDa~~~~~~Gip~~~~G~G~ 377 (410)
T TIGR01882 351 ISPIRGGTDGSQLSYMGLPTPNIFAGG 377 (410)
T ss_pred ccccceechHHHHHhCCCCCCeEcCCc
Confidence 4456799999999887 8988765543
No 38
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=8.5e-34 Score=271.40 Aligned_cols=283 Identities=19% Similarity=0.188 Sum_probs=201.7
Q ss_pred CHHHHHHHHHHHHHHHHcCC---EEEEcCcCCEEEEecCCCCCCCeEEEecccCccccC---------------------
Q 017774 2 SPASVRAGNLIRQWMEDAGL---RTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~---~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------------------- 57 (366)
|++|.++++||.++|+++|+ ++... .+|+++++.+ ++ .++|+|+|||||||.+
T Consensus 12 s~~e~~~~~~i~~~l~~~g~~~~~~~~~-~~nvva~~~~-~~-~~~l~l~gH~DtVp~~~~~~~~W~~~p~~~~~~~~~~ 88 (373)
T TIGR01900 12 SDHEGPIADEIEAALNNLELEGLEVFRF-GDNVLARTDF-GK-ASRVILAGHIDTVPIADNFPPKWLEPGDSLIREEIAH 88 (373)
T ss_pred CchHHHHHHHHHHHHhhccccCceEEEE-CCEEEEecCC-CC-CCeEEEeCccccccCCCCChhhhccCccccccccccc
Confidence 68899999999999999964 34332 2489999753 22 4889999999999741
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHh--cCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhccccccccccc
Q 017774 58 -----------GIFDGSLGIITAISALKVLKS--TGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVS 124 (366)
Q Consensus 58 -----------g~~D~k~gi~~~l~a~~~l~~--~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~ 124 (366)
|+.|||+|++++|+|++.|++ .+. .++++|.|+|++|||.++. ..|++.++....
T Consensus 89 ~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~--~~~~~i~~~~~~dEE~~~~---~~G~~~~~~~~~------- 156 (373)
T TIGR01900 89 AHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPET--ELKHDLTLIAYDCEEVAAE---KNGLGHIRDAHP------- 156 (373)
T ss_pred ccccCCEEEecCchhhhHHHHHHHHHHHHHhhhcccc--CCCCCEEEEEEecccccCC---CCCHHHHHHhCc-------
Confidence 556999999999999999964 344 6789999999999997520 137777652100
Q ss_pred CCCCCcHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCC
Q 017774 125 DKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTV 204 (366)
Q Consensus 125 d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~ 204 (366)
. .+.+|.+ +..||. + ..++.+++|..+++|+++|+++|+|.
T Consensus 157 --------------~-----------~~~~d~~-----iv~Ept------~--~~i~~g~~G~~~~~i~v~G~~~H~s~- 197 (373)
T TIGR01900 157 --------------D-----------WLAADFA-----IIGEPT------G--GGIEAGCNGNIRFDVTAHGVAAHSAR- 197 (373)
T ss_pred --------------c-----------cccCCEE-----EEECCC------C--CcccccceeeEEEEEEEEeeccccCC-
Confidence 0 0112211 223332 1 23667899999999999999999998
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCCh
Q 017774 205 PMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDD 284 (366)
Q Consensus 205 p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~ 284 (366)
| +.|.|||..++++|..|+.+...... .. +.....++|++.|+| |.+.|+||++|++++|+|+.|+
T Consensus 198 p-~~g~NAi~~~~~~i~~l~~l~~~~~~-------~~-----~~~~~~t~~v~~I~G-G~~~nvVP~~a~~~~diR~~p~ 263 (373)
T TIGR01900 198 A-WLGDNAIHKAADIINKLAAYEAAEVN-------ID-----GLDYREGLNATFCEG-GKANNVIPDEARMHLNFRFAPD 263 (373)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhhccccc-------cc-----CCcccceEEEEEEeC-CCCCcccCCeEEEEEEEecCCC
Confidence 8 89999999999999999876532110 00 111246899999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH--------HHHHH------hCceEEEEee-----------ehHHHHHHHHHHhhccCCCCCCCCC
Q 017774 285 AGRETVLYELSNQLY--------QICEK------RSVSCIVERK-----------LKSASYAALKRMTGATQHEIPVIMS 339 (366)
Q Consensus 285 ~~~~~~~~~i~~~~~--------~~~~~------~~~~~~v~~~-----------~~~~l~~~~~~~~g~~~~~~~~~~~ 339 (366)
++.+++.+.|++.++ .+... .++++++... +++.+.++++++++ ..+. ..
T Consensus 264 ~~~e~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~--~~ 338 (373)
T TIGR01900 264 KDLAEAKALMMGADAGAELGNGEHVAEGGEFDGQDGIEIAMEDEAGGALPGLGAPLAQDLIDAVGEEKG---RDPL--AK 338 (373)
T ss_pred cCHHHHHHHHHhhhhhhhhhHHHHHHhhccccccccceEEEcccCCCCCCCCCCHHHHHHHHHHHhccC---CCcc--cc
Confidence 999999999976532 22221 1233433211 34455555555443 2222 25
Q ss_pred chhhHHHHHhhh-cCEEEE
Q 017774 340 GAGHDAMAMSHL-TKVCSL 357 (366)
Q Consensus 340 ~ggtD~~~~~~~-iP~~~~ 357 (366)
.|+||+++|... +|++.+
T Consensus 339 ~g~tD~~~~~~~gip~v~~ 357 (373)
T TIGR01900 339 FGWTDVARFSALGIPALNF 357 (373)
T ss_pred cCCccHHHHHhcCCCEEEe
Confidence 688999999876 999963
No 39
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=9e-34 Score=275.64 Aligned_cols=288 Identities=17% Similarity=0.166 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEc----CcCCEEEEecCCCC-CCCeEEEecccCccccC--------------------
Q 017774 3 PASVRAGNLIRQWMEDAGLRTWVD----HLGNVHGRVEGLNA-SAQALLIGSHLDTVVDA-------------------- 57 (366)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~----~~gnvia~~~g~~~-~~~~i~l~~H~D~Vp~g-------------------- 57 (366)
++|.++++||+++|+++|+++++. ..+|++++++|.++ ..|+|+|+|||||||.+
T Consensus 33 ~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~ly 112 (421)
T PRK08596 33 RNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLY 112 (421)
T ss_pred hhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEEEEeccccccCCCCccccccCCCCcEEECCEEE
Confidence 478999999999999999998752 45799999987543 23689999999999853
Q ss_pred --CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHH
Q 017774 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDAL 135 (366)
Q Consensus 58 --g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~ 135 (366)
|+.|||++++++|+|+++|++.++ +++++|.|+|++|||+++ .|+++++..
T Consensus 113 GrG~~D~Kgg~a~~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~g~-----~G~~~~~~~-------------------- 165 (421)
T PRK08596 113 GRGAADMKGGLAGALFAIQLLHEAGI--ELPGDLIFQSVIGEEVGE-----AGTLQCCER-------------------- 165 (421)
T ss_pred eccccccchHHHHHHHHHHHHHHcCC--CCCCcEEEEEEeccccCC-----cCHHHHHhc--------------------
Confidence 667999999999999999999987 789999999999999864 588887521
Q ss_pred HHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCC----------CCCCCCC
Q 017774 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQ----------GHAGTVP 205 (366)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~----------~Has~~p 205 (366)
++ .+|. + ++.||+. . .+.+++|...++++++|.+ +|++. |
T Consensus 166 ---~~------------~~d~--~---i~~ep~~--------~-~~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~-p 215 (421)
T PRK08596 166 ---GY------------DADF--A---VVVDTSD--------L-HMQGQGGVITGWITVKSPQTFHDGTRRQMIHAGG-G 215 (421)
T ss_pred ---CC------------CCCE--E---EECCCCC--------C-ccccccceeeEEEEEEeecccccccccccccccC-C
Confidence 11 1221 2 3455421 1 1356888887888888763 79998 8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChH
Q 017774 206 MSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDA 285 (366)
Q Consensus 206 ~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~ 285 (366)
+.|.|||..++++|..|+.+...+ ......+.+ +. +.+++|++.|+| |...|+||++|++.+|+|+.|++
T Consensus 216 -~~G~nai~~~~~~i~~l~~~~~~~-~~~~~~~~~------~~-~~~t~~v~~i~g-G~~~nvvP~~~~~~~d~R~~p~~ 285 (421)
T PRK08596 216 -LFGASAIEKMMKIIQSLQELERHW-AVMKSYPGF------PP-GTNTINPAVIEG-GRHAAFIADECRLWITVHFYPNE 285 (421)
T ss_pred -ccCcCHHHHHHHHHHHHHHHHHHH-hhcccCccC------CC-CCcceeeeeeeC-CCCCCccCceEEEEEEeeeCCCC
Confidence 899999999999999998864321 000000000 11 357899999999 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH------hCceEEE------E---e--e-----ehHHHHHHHHHHhhc-cCCCCCCCCCchh
Q 017774 286 GRETVLYELSNQLYQICEK------RSVSCIV------E---R--K-----LKSASYAALKRMTGA-TQHEIPVIMSGAG 342 (366)
Q Consensus 286 ~~~~~~~~i~~~~~~~~~~------~~~~~~v------~---~--~-----~~~~l~~~~~~~~g~-~~~~~~~~~~~gg 342 (366)
+.+++.++|++.+++.+.. ..+++++ . . . ...++.++++++..+ .+.++....++|+
T Consensus 286 ~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~a~~~~~g~~~~~~~~~g~ 365 (421)
T PRK08596 286 TYEQVIKEIEEYIGKVAAADPWLRENPPQFKWGGESMIEDRGEIFPSLEIDSEHPAVKTLSSAHESVLSKNAILDMSTTV 365 (421)
T ss_pred CHHHHHHHHHHHHHHHHhcChhhhhCCceeEEecccccccccccCCCccCCCCchHHHHHHHHHHHHhCCCCeeeEEeee
Confidence 9999999999998875431 1122221 0 0 0 123344444443332 1333343346789
Q ss_pred hHHHHHhhh-cCEEEE
Q 017774 343 HDAMAMSHL-TKVCSL 357 (366)
Q Consensus 343 tD~~~~~~~-iP~~~~ 357 (366)
+|++++... +|++.+
T Consensus 366 tD~~~~~~~gip~v~~ 381 (421)
T PRK08596 366 TDGGWFAEFGIPAVIY 381 (421)
T ss_pred cchhhhhhcCCCEEEE
Confidence 999999877 998743
No 40
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=8.4e-34 Score=269.31 Aligned_cols=272 Identities=19% Similarity=0.241 Sum_probs=200.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccC-------------CCCCCHHHHH
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------GIFDGSLGII 67 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g-------------g~~D~k~gi~ 67 (366)
.|++|.++++|+.++|+++|++++.+..+|++++++ .. .|+|+|+||+||||.. |+.|||++++
T Consensus 21 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~i~~~~-~~--~~~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~a 97 (348)
T PRK04443 21 PSGEEAAAAEFLVEFMESHGREAWVDEAGNARGPAG-DG--PPLVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLA 97 (348)
T ss_pred CCCChHHHHHHHHHHHHHcCCEEEEcCCCcEEEEcC-CC--CCEEEEEeeccccCCCCCcEeeCCeEEeecccccccHHH
Confidence 367899999999999999999998888899999984 22 4899999999999852 7889999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchhhhh
Q 017774 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESL 147 (366)
Q Consensus 68 ~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~ 147 (366)
++|+|+++| +. +++++|.|++++|||+++ .|...++. +
T Consensus 98 a~l~A~~~l---~~--~~~~~i~~~~~~dEE~g~-----~~~~~~l~----------------------~---------- 135 (348)
T PRK04443 98 AFAAAAARL---EA--LVRARVSFVGAVEEEAPS-----SGGARLVA----------------------D---------- 135 (348)
T ss_pred HHHHHHHHh---cc--cCCCCEEEEEEcccccCC-----hhHHHHHH----------------------h----------
Confidence 999999999 33 788999999999999864 23333321 0
Q ss_pred hhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHh
Q 017774 148 LQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLC 227 (366)
Q Consensus 148 ~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~ 227 (366)
...+|.+ +..||+ +. ..++.+++|..+++++++|+++|||. | +.||+..+++++..|+.+.
T Consensus 136 ---~~~~d~~-----iv~Ept------~~-~~i~~~~kG~~~~~l~~~G~~~Hss~-~---g~NAi~~~~~~l~~l~~~~ 196 (348)
T PRK04443 136 ---RERPDAV-----IIGEPS------GW-DGITLGYKGRLLVTYVATSESFHSAG-P---EPNAAEDAIEWWLAVEAWF 196 (348)
T ss_pred ---ccCCCEE-----EEeCCC------Cc-cceeeecccEEEEEEEEEeCCCccCC-C---CCCHHHHHHHHHHHHHHHH
Confidence 1112222 233432 11 13667899999999999999999997 6 5899999999999998764
Q ss_pred cCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCc
Q 017774 228 KHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSV 307 (366)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~ 307 (366)
.. .. .. . +...+.++|++.|+. ..|+||++|++.+|+|+.|.++.+++.+.|++++. ++
T Consensus 197 ~~-~~-----~~-~-----~~~~~~~~~i~~i~~---~~n~iP~~~~~~~d~R~~p~~~~~~i~~~i~~~~~------~~ 255 (348)
T PRK04443 197 EA-ND-----GR-E-----RVFDQVTPKLVDFDS---SSDGLTVEAEMTVGLRLPPGLSPEEAREILDALLP------TG 255 (348)
T ss_pred hc-Cc-----cc-c-----ccccccceeeeEEec---CCCCCCceEEEEEEEccCCCCCHHHHHHHHHHhCC------Cc
Confidence 31 00 00 0 111356788888884 46999999999999999999999999999988873 23
Q ss_pred eEEEEee-------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh--cCEEEE
Q 017774 308 SCIVERK-------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL--TKVCSL 357 (366)
Q Consensus 308 ~~~v~~~-------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~--iP~~~~ 357 (366)
++++... ...++.++++++..+.+..+.....+|++|+++|.+. +|++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tD~~~~~~~~gip~v~~ 314 (348)
T PRK04443 256 TVTFTGAVPAYMVSKRTPLARAFRVAIREAGGTPRLKRKTGTSDMNVVAPAWGCPMVAY 314 (348)
T ss_pred EEEEecCCCceecCCCCHHHHHHHHHHHHhcCCcceeccccCCcHHHHhhhcCCCEEEE
Confidence 4443322 2344555555555443222333346799999999863 898843
No 41
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=9.5e-34 Score=273.80 Aligned_cols=285 Identities=19% Similarity=0.190 Sum_probs=207.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEE-EEcCcCCEEEEecCCCCCCCeEEEecccCccccC----------------------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRT-WVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~-~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------------- 57 (366)
+|++|.+++++|.++|+++|+++ +++..+|+++++++. .|+|+|++||||||.+
T Consensus 30 ~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~---~~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGr 106 (399)
T PRK13004 30 ESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHG---KKLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGR 106 (399)
T ss_pred CCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCC---CcEEEEEeccCccCCCChhhcccCCCccEEECCEEEeC
Confidence 47889999999999999999974 456778999998642 3899999999999963
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHH
Q 017774 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (366)
Q Consensus 58 g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~ 137 (366)
|..|||++++++|+|+++|++.++ .++++|.++|++|||.++ -.|++.+++.
T Consensus 107 G~~D~Kg~~aa~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~~~----g~~~~~~~~~---------------------- 158 (399)
T PRK13004 107 GTSDQKGGMASMVYAAKIIKDLGL--DDEYTLYVTGTVQEEDCD----GLCWRYIIEE---------------------- 158 (399)
T ss_pred CccccchHHHHHHHHHHHHHhcCC--CCCCeEEEEEEcccccCc----chhHHHHHHh----------------------
Confidence 556999999999999999999986 789999999999999642 1345555410
Q ss_pred CCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHH
Q 017774 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (366)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a 217 (366)
.+ +.+|.++ ..|+. ...++.+++|..+++|+++|+++|++. | +.|.|||..++
T Consensus 159 ~~------------~~~d~~i-----~~e~~--------~~~i~~~~~G~~~~~v~v~G~~~Ha~~-p-~~g~nAi~~~~ 211 (399)
T PRK13004 159 DK------------IKPDFVV-----ITEPT--------DLNIYRGQRGRMEIRVETKGVSCHGSA-P-ERGDNAIYKMA 211 (399)
T ss_pred cC------------CCCCEEE-----EccCC--------CCceEEecceEEEEEEEEeccccccCC-C-CCCCCHHHHHH
Confidence 01 1123221 22321 123667899999999999999999997 8 89999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHH
Q 017774 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQ 297 (366)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~ 297 (366)
+++..|+.+...... . +..+..+++++.|++++.+.|+||++|++++|+|+.|.++.+++.++|+++
T Consensus 212 ~~i~~l~~~~~~~~~-----~--------~~~~~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~~ 278 (399)
T PRK13004 212 PILNELEELNPNLKE-----D--------PFLGKGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRAL 278 (399)
T ss_pred HHHHHHHhhcccccc-----C--------CcCCCceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHHH
Confidence 999999876542100 0 111356889999987346999999999999999999999999999999887
Q ss_pred HHHHHHHhCceEEEEe-----------------e-----ehHHHHHHHHHHhhcc-CCCCCCCCCchhhHHHHHh-hh-c
Q 017774 298 LYQICEKRSVSCIVER-----------------K-----LKSASYAALKRMTGAT-QHEIPVIMSGAGHDAMAMS-HL-T 352 (366)
Q Consensus 298 ~~~~~~~~~~~~~v~~-----------------~-----~~~~l~~~~~~~~g~~-~~~~~~~~~~ggtD~~~~~-~~-i 352 (366)
+.. ...++++++.. . ..+++.+.+++++.+. +.++.....++++|++.+. .. +
T Consensus 279 ~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~a~~~~~g~~~~~~~~~~~td~~~~~~~~Gi 356 (399)
T PRK13004 279 PAV--KKANAKVSMYNYDRPSYTGLVYPTECYFPTWLYPEDHEFVKAAVEAYKGLFGKAPEVDKWTFSTNGVSIAGRAGI 356 (399)
T ss_pred Hhh--ccccceEEEecccCCCcccccccccccccccccCCCCHHHHHHHHHHHHHhCCCCeecccccccCCeEEehhcCC
Confidence 432 23344443221 1 1344555555554432 3333333345778887775 34 9
Q ss_pred CEEEEE
Q 017774 353 KVCSLL 358 (366)
Q Consensus 353 P~~~~~ 358 (366)
|++.+.
T Consensus 357 p~v~~G 362 (399)
T PRK13004 357 PTIGFG 362 (399)
T ss_pred CEEEEC
Confidence 988543
No 42
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.7e-33 Score=265.46 Aligned_cols=275 Identities=20% Similarity=0.187 Sum_probs=204.7
Q ss_pred CCHHHHHHHHHHHHHHHHc-CCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccC---------------CCCCCHH
Q 017774 1 MSPASVRAGNLIRQWMEDA-GLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------GIFDGSL 64 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~-G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------g~~D~k~ 64 (366)
.|++|.++++||.++|+++ |+++... ..|+++++.+ +. .++|+|+|||||||.+ |..|||+
T Consensus 22 ~s~~e~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~-~~-~~~i~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg 98 (352)
T PRK13007 22 VSGDEKALADAVEAALRALPHLEVIRH-GNSVVARTDL-GR-PSRVVLAGHLDTVPVADNLPSRREGDRLYGCGASDMKS 98 (352)
T ss_pred CCchHHHHHHHHHHHHHhCcCceEEec-CCeEEEEccC-CC-CCeEEEEccccccCCCCCCCcceeCCEEEccCcccccH
Confidence 4789999999999999996 9887653 3579999843 32 3689999999999963 6679999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchh
Q 017774 65 GIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAE 144 (366)
Q Consensus 65 gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~ 144 (366)
+++++|+++++|. +++++|.|+|+++||.++. ..|++.+......
T Consensus 99 ~~a~~l~a~~~l~------~~~~~i~~~~~~~EE~~~~---~~G~~~~~~~~~~-------------------------- 143 (352)
T PRK13007 99 GLAVMLHLAATLA------EPAHDLTLVFYDCEEVEAE---ANGLGRLAREHPE-------------------------- 143 (352)
T ss_pred HHHHHHHHHHHhh------ccCCCeEEEEEecccccCC---cccHHHHHHhccc--------------------------
Confidence 9999999999993 5678999999999997531 1377766521000
Q ss_pred hhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017774 145 ESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE 224 (366)
Q Consensus 145 ~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~ 224 (366)
.+++|.+ +..||. + ..+..+.+|..+++++++|+++|+|. | +.+.||+..++++|..++
T Consensus 144 ------~~~~d~~-----i~~ep~------~--~~i~~~~~G~~~~~i~v~G~~~Hs~~-p-~~g~nAi~~~~~~i~~l~ 202 (352)
T PRK13007 144 ------WLAGDFA-----ILLEPT------D--GVIEAGCQGTLRVTVTFHGRRAHSAR-S-WLGENAIHKAAPVLARLA 202 (352)
T ss_pred ------ccCCCEE-----EEecCC------C--CceEeeccceEEEEEEEEecccccCC-C-ccCcCHHHHHHHHHHHHH
Confidence 0112221 233431 1 23567899999999999999999998 8 799999999999999998
Q ss_pred HHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHH
Q 017774 225 RLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK 304 (366)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~ 304 (366)
.+..+... .. ....+.+++++.|++ |...|+||++|++++|+|+.|.++.+++.++|++.++..+
T Consensus 203 ~~~~~~~~-------~~-----~~~~~~~~~~~~i~g-G~~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~~~~~~~-- 267 (352)
T PRK13007 203 AYEPREVV-------VD-----GLTYREGLNAVRISG-GVAGNVIPDECVVNVNYRFAPDRSLEEALAHVREVFDGFA-- 267 (352)
T ss_pred Hhcccccc-------cC-----CCCccceeEeEeEec-CCcCccCCCeEEEEEEEeeCCCCCHHHHHHHHHHHhcccc--
Confidence 76542110 00 001145889999998 8999999999999999999999999999999998876532
Q ss_pred hCceEEEEee-------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEE
Q 017774 305 RSVSCIVERK-------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSL 357 (366)
Q Consensus 305 ~~~~~~v~~~-------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~ 357 (366)
++++... ..+++.+.+.++++. .+. +..|++|+++++.. +|++.+
T Consensus 268 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~--~~~g~td~~~~~~~Gip~v~~ 320 (352)
T PRK13007 268 ---EVEVTDLAPGARPGLDHPAAAALVAAVGG---EVR--AKYGWTDVARFSALGIPAVNF 320 (352)
T ss_pred ---EEEeecccCCCCCCCCCHHHHHHHHHhCC---CCc--cccccchHHHHHhCCCCEEEe
Confidence 4444322 456666777776552 222 24688999999887 998864
No 43
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=272.49 Aligned_cols=293 Identities=19% Similarity=0.205 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHcCCEEEEc---CcCCEEEEecCCCCCCCeEEEecccCccccC----------------------CCC
Q 017774 6 VRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GIF 60 (366)
Q Consensus 6 ~~~~~~l~~~l~~~G~~~~~~---~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g----------------------g~~ 60 (366)
.++++||.++|+++|+++++. ...|+++++++ + .+|+|+|+|||||||.+ |+.
T Consensus 25 ~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~-~-~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~ 102 (436)
T PRK06446 25 EETANYLKDTMEKLGIKANIERTKGHPVVYGEINV-G-AKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGAS 102 (436)
T ss_pred HHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecC-C-CCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEecc
Confidence 799999999999999998654 34579999853 2 25899999999999852 678
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCC
Q 017774 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (366)
Q Consensus 61 D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~ 140 (366)
|||+|++++|+|++.|++.+ .++.+|.|+|++|||.++ .|++.++.... .
T Consensus 103 DmKgglaa~l~A~~~l~~~~---~~~~~i~~~~~~dEE~g~-----~g~~~~l~~~~--------------------~-- 152 (436)
T PRK06446 103 DNKGTLMARLFAIKHLIDKH---KLNVNVKFLYEGEEEIGS-----PNLEDFIEKNK--------------------N-- 152 (436)
T ss_pred CCcHHHHHHHHHHHHHHHcC---CCCCCEEEEEEcccccCC-----HhHHHHHHHHH--------------------H--
Confidence 99999999999999998765 678899999999999864 47766652100 0
Q ss_pred CchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEe--CCCCCCCCCCCCCCCHHHHHHH
Q 017774 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG--SQGHAGTVPMSMRQDPMTAAAE 218 (366)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G--~~~Has~~p~~~g~NAi~~~a~ 218 (366)
.+.+|.+ + +|++.. ...+. ..++.+++|..|++++++| +++|+|. | +.+.|||..+++
T Consensus 153 ----------~~~~d~v-----i-~E~~~~-~~~~~-~~i~~~~kG~~~~~l~v~G~~~~~Hss~-p-~~g~NAi~~~~~ 212 (436)
T PRK06446 153 ----------KLKADSV-----I-MEGAGL-DPKGR-PQIVLGVKGLLYVELVLRTGTKDLHSSN-A-PIVRNPAWDLVK 212 (436)
T ss_pred ----------HhCCCEE-----E-ECCCCc-cCCCC-eEEEEecCeEEEEEEEEEeCCCCCCCCC-C-ccCCCHHHHHHH
Confidence 0112221 1 244321 11111 2367889999999999999 9999998 6 689999999999
Q ss_pred HHHHHHHHhcC-----CC---CCcc-----------cC-------C---CCCC-c---ccccCCCCcEEEEEEEEecC--
Q 017774 219 LIVLLERLCKH-----PK---DFLS-----------YD-------G---RSNC-S---TLESLSSSLVCTVGEISSWP-- 263 (366)
Q Consensus 219 ~i~~l~~~~~~-----~~---~~~~-----------~~-------~---~~~~-~---~~~~~~~~~~~~~~~I~g~g-- 263 (366)
+|.+|.+.... +. ..+. .+ - .+.. . ........+++|++.|++ |
T Consensus 213 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~-g~~ 291 (436)
T PRK06446 213 LLSTLVDGEGRVLIPGFYDDVRELTEEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYS-GYT 291 (436)
T ss_pred HHHhhCCCCCCEEccchhcCCCCCCHHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeec-ccc
Confidence 99999754210 00 0000 00 0 0000 0 000011357899999998 5
Q ss_pred --CCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----------ehHHHHHHHHHHhhcc
Q 017774 264 --SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-----------LKSASYAALKRMTGAT 330 (366)
Q Consensus 264 --~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-----------~~~~l~~~~~~~~g~~ 330 (366)
...|+||++|++++|+|+.|.++.+++.+.|++++++. ..++++++... +++.+.++++++++
T Consensus 292 ~~~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~l~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~v~~l~~a~~~~~g-- 367 (436)
T PRK06446 292 GKGSKTIVPSRAFAKLDFRLVPNQDPYKIFELLKKHLQKV--GFNGEIIVHGFEYPVRTSVNSKVVKAMIESAKRVYG-- 367 (436)
T ss_pred CCCCCcEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHHc--CCCeEEEEcCCcceeecCCCCHHHHHHHHHHHHHhC--
Confidence 46799999999999999999999999999999988652 12333333221 34444455555543
Q ss_pred CCCCCCC-CCchhhHHHHHhh-h-cCEEE
Q 017774 331 QHEIPVI-MSGAGHDAMAMSH-L-TKVCS 356 (366)
Q Consensus 331 ~~~~~~~-~~~ggtD~~~~~~-~-iP~~~ 356 (366)
..+... .++|++|+++|.+ . +|++.
T Consensus 368 -~~~~~~~~~~g~~d~~~~~~~~gip~v~ 395 (436)
T PRK06446 368 -TEPVVIPNSAGTQPMGLFVYKLGIRDIV 395 (436)
T ss_pred -CCCceecCCCCcchHHHHHHHhCCCcce
Confidence 222221 2346678888865 3 89875
No 44
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=277.46 Aligned_cols=304 Identities=18% Similarity=0.169 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHcCCEEEEcCc--CCEEEEecCCCCCCCeEEEecccCccccC------------------------CCC
Q 017774 7 RAGNLIRQWMEDAGLRTWVDHL--GNVHGRVEGLNASAQALLIGSHLDTVVDA------------------------GIF 60 (366)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~~--gnvia~~~g~~~~~~~i~l~~H~D~Vp~g------------------------g~~ 60 (366)
++++||.++|+.+|+.++.... .|+++.++|.+++.++|+|+|||||||.+ |+.
T Consensus 74 ~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~ 153 (486)
T PRK08262 74 ALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQDVVPVAPGTEGDWTHPPFSGVIADGYVWGRGAL 153 (486)
T ss_pred HHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECcccccCCCCCCcccCccCCCceEeeCCEEEecCcc
Confidence 5899999999999987654322 47888887765444899999999999863 667
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCC
Q 017774 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (366)
Q Consensus 61 D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~ 140 (366)
|||++++++|.|++.|++.+. +++++|.|+|++|||+++ .|++.+...+. ..++
T Consensus 154 D~Kg~~aa~L~A~~~l~~~~~--~l~~~I~llf~~dEE~g~-----~G~~~l~~~l~-------------------~~~~ 207 (486)
T PRK08262 154 DDKGSLVAILEAAEALLAQGF--QPRRTIYLAFGHDEEVGG-----LGARAIAELLK-------------------ERGV 207 (486)
T ss_pred ccchhHHHHHHHHHHHHHcCC--CCCCeEEEEEecccccCC-----cCHHHHHHHHH-------------------HhcC
Confidence 999999999999999999886 789999999999999864 48887763211 1111
Q ss_pred CchhhhhhhccCCCCccceeeEeeccCCccccccCcc-cceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHH
Q 017774 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFP-LGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAEL 219 (366)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~-~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~ 219 (366)
..+. .+..+.++. .+..++ .+.+ ..+..+.+|..+++|+++|+++|+|. | +. .||+..++++
T Consensus 208 ~~~~------~~~~~~~i~---~~~~~~-----~~~p~~~i~~~~kG~~~~~i~v~G~~~Hss~-p-~~-~nai~~l~~~ 270 (486)
T PRK08262 208 RLAF------VLDEGGAIT---EGVLPG-----VKKPVALIGVAEKGYATLELTARATGGHSSM-P-PR-QTAIGRLARA 270 (486)
T ss_pred CEEE------EEeCCceec---ccccCC-----CCceEEeeEEeeeeeEEEEEEEecCCCCCCC-C-CC-CCHHHHHHHH
Confidence 1000 000000000 010000 0111 12445689999999999999999999 7 57 9999999999
Q ss_pred HHHHHHHhcCCC-C------------CcccCC-----C---CCC---------cccccCCCCcEEEEEEEEecCCCccee
Q 017774 220 IVLLERLCKHPK-D------------FLSYDG-----R---SNC---------STLESLSSSLVCTVGEISSWPSASNVI 269 (366)
Q Consensus 220 i~~l~~~~~~~~-~------------~~~~~~-----~---~~~---------~~~~~~~~~~~~~~~~I~g~g~~~NvI 269 (366)
|.+|+....... . ...++. . ..+ ....+. ..+++|++.|+| |...|+|
T Consensus 271 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~t~~i~~I~g-G~~~NvI 348 (486)
T PRK08262 271 LTRLEDNPLPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAM-LRTTTAPTMLKG-SPKDNVL 348 (486)
T ss_pred HHHHhhCCCCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCcccee-EEeeeeeeEEec-CCccccC
Confidence 999986421100 0 000000 0 000 000011 357999999999 8999999
Q ss_pred CCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-------------ehHHHHHHHHHHhhccCCCCCC
Q 017774 270 PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------------LKSASYAALKRMTGATQHEIPV 336 (366)
Q Consensus 270 P~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-------------~~~~l~~~~~~~~g~~~~~~~~ 336 (366)
|++|++++|+|+.|.++.+++.++|++++++. ++++++... +.+.+.+++++.+++ .....
T Consensus 349 P~~a~~~~diR~~p~~~~~~i~~~i~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~lv~~l~~a~~~~~g~--~~~~~ 422 (486)
T PRK08262 349 PQRATATVNFRILPGDSVESVLAHVRRAVADD----RVEIEVLGGNSEPSPVSSTDSAAYKLLAATIREVFPD--VVVAP 422 (486)
T ss_pred CCccEEEEEEEeCCCCCHHHHHHHHHHHhccC----ceEEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHCCC--Ccccc
Confidence 99999999999999999999999999888653 555554421 234444444444432 12222
Q ss_pred CCCchhhHHHHHhhhcCEEEEEEee
Q 017774 337 IMSGAGHDAMAMSHLTKVCSLLCRL 361 (366)
Q Consensus 337 ~~~~ggtD~~~~~~~iP~~~~~~g~ 361 (366)
..++||||+++|+..+|+++.|.+.
T Consensus 423 ~~~~g~tDa~~~~~~~p~~~~~~~~ 447 (486)
T PRK08262 423 YLVVGATDSRHYSGISDNVYRFSPL 447 (486)
T ss_pred ceecccccHHHHHHhcCCeEEECCc
Confidence 3467999999999888887766544
No 45
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=3.5e-33 Score=269.53 Aligned_cols=284 Identities=23% Similarity=0.230 Sum_probs=204.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEcCcCCEEEEecCCCCCCCeEEEecccCccccC----------------------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------------- 57 (366)
.|++|.++++||.++|+++|++ +.++..+|+++++ |.+ .|+|+|+|||||||.+
T Consensus 28 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~-g~~--~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGr 104 (395)
T TIGR03320 28 ESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYI-GHG--PKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGR 104 (395)
T ss_pred CCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEe-CCC--CcEEEEEecccccCCCCccccccCCCceEEECCEEEec
Confidence 3678999999999999999997 4566678999988 432 4899999999999853
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHH
Q 017774 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (366)
Q Consensus 58 g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~ 137 (366)
|+.|||++++++|+|+++|++.+. .++.+|.|++++|||.++ -.+++.++. +
T Consensus 105 G~~D~Kg~~aa~l~A~~~l~~~g~--~~~~~i~~~~~~dEE~~~----g~~~~~~~~----------------------~ 156 (395)
T TIGR03320 105 GASDQEGGIASMVYAGKIIKDLGL--LDDYTLLVTGTVQEEDCD----GLCWQYIIE----------------------E 156 (395)
T ss_pred CccCccchHHHHHHHHHHHHHcCC--CCCceEEEEecccccccC----chHHHHHHH----------------------h
Confidence 678999999999999999999886 678899999999999742 012334331 1
Q ss_pred CCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHH
Q 017774 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (366)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a 217 (366)
.++ .+|.+ +..||+ ...++.+++|..+++|+++|+++|+|. | +.|.||+..++
T Consensus 157 ~~~------------~~d~~-----iv~ep~--------~~~i~~g~~G~~~~~v~~~G~~~Hss~-p-~~g~nAi~~~~ 209 (395)
T TIGR03320 157 DGI------------KPEFV-----VITEPT--------DMNIYRGQRGRMEIKVTVKGVSCHGSA-P-ERGDNAIYKMA 209 (395)
T ss_pred cCC------------CCCEE-----EEcCCC--------ccceEEecceEEEEEEEEeeeccccCC-C-CCCCCHHHHHH
Confidence 111 12322 223331 123667899999999999999999998 8 89999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHH
Q 017774 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQ 297 (366)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~ 297 (366)
++|..|+.+..... . ++..++.+++++.|++++...|+||++|++.+|+|+.|.++.+++.+.|++.
T Consensus 210 ~~l~~l~~~~~~~~--------~-----~~~~~~~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~~ 276 (395)
T TIGR03320 210 PILKELSQLNANLV--------E-----DPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNL 276 (395)
T ss_pred HHHHHHHHHHHhhc--------C-----CcccCcCceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 99999988653210 0 0222356899999998334899999999999999999999999999999887
Q ss_pred HHHHHHHhCceEEEEe-----------------e---------ehHHHHHHHHHHhhccCCCCCCCCCchhhHH-HHHhh
Q 017774 298 LYQICEKRSVSCIVER-----------------K---------LKSASYAALKRMTGATQHEIPVIMSGAGHDA-MAMSH 350 (366)
Q Consensus 298 ~~~~~~~~~~~~~v~~-----------------~---------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~-~~~~~ 350 (366)
+... ..++++++.. . +++.+.++++++++. ++.....++++|+ +++++
T Consensus 277 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~ 351 (395)
T TIGR03320 277 PAVQ--GAEAKVEMYNYDRPSYTGLVYPTECYFPTWVLPEDHLITKAALETYKRLFGK---EPGVDKWTFSTNGVSIMGR 351 (395)
T ss_pred Hhhc--CCCceEeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHhCC---CCceeecceecccceehhh
Confidence 6431 1123343210 0 334444555555443 2222234577787 45566
Q ss_pred h-cCEEEEEEee
Q 017774 351 L-TKVCSLLCRL 361 (366)
Q Consensus 351 ~-iP~~~~~~g~ 361 (366)
. +|++. |.|.
T Consensus 352 ~g~p~v~-~Gpg 362 (395)
T TIGR03320 352 HGIPVIG-FGPG 362 (395)
T ss_pred cCCCEEE-ECCC
Confidence 5 89884 4443
No 46
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=6.2e-33 Score=267.79 Aligned_cols=284 Identities=23% Similarity=0.223 Sum_probs=204.9
Q ss_pred CCHHHHHHHHHHHHHHHHcCCE-EEEcCcCCEEEEecCCCCCCCeEEEecccCccccC----------------------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLR-TWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~-~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------------- 57 (366)
.|++|.++++||.++|+++|++ ++.+..+|+++.+ |.+ .++|+|+|||||||.+
T Consensus 28 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~-g~~--~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGr 104 (395)
T TIGR03526 28 ESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYI-GHG--PKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGR 104 (395)
T ss_pred CCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEe-CCC--CCEEEEEeeccccCCCCcccccCCCCceEEECCEEEec
Confidence 3678999999999999999997 4566678999988 432 4899999999999853
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHH
Q 017774 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (366)
Q Consensus 58 g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~ 137 (366)
|..|||++++++|+|++.|++.++ .++.+|.|+++++||.++ -.|++.++. +
T Consensus 105 G~~D~Kg~~aa~l~a~~~l~~~~~--~~~~~v~~~~~~dEE~~~----g~~~~~~~~----------------------~ 156 (395)
T TIGR03526 105 GASDQEGGIASMVYAGKIIKDLGL--LDDYTLLVTGTVQEEDCD----GLCWQYIIE----------------------E 156 (395)
T ss_pred CccccchhHHHHHHHHHHHHHcCC--CCCceEEEEEecccccCC----cHhHHHHHh----------------------c
Confidence 678999999999999999999986 678899999999999531 024444431 0
Q ss_pred CCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHH
Q 017774 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAA 217 (366)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a 217 (366)
.+ +.+|.+ +..|| .. ..+..+++|..+++|+++|+++|++. | +.|.|||..++
T Consensus 157 ~~------------~~~d~~-----i~~ep------~~--~~i~~g~~G~~~~~v~v~G~~~Hs~~-p-~~g~nAi~~~~ 209 (395)
T TIGR03526 157 DK------------IKPEFV-----VITEP------TD--MNIYRGQRGRMEIKVTVKGVSCHGSA-P-ERGDNAIYKMA 209 (395)
T ss_pred cC------------CCCCEE-----EecCC------CC--ceEEEEcceEEEEEEEEecCCCccCC-C-CCCCCHHHHHH
Confidence 11 112322 22333 11 23667899999999999999999998 8 89999999999
Q ss_pred HHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHH
Q 017774 218 ELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQ 297 (366)
Q Consensus 218 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~ 297 (366)
+++..|+.+...... ++..+..+++++.|++++...|+||++|++++|+|+.|+++.+++.+.|++.
T Consensus 210 ~~i~~l~~~~~~~~~-------------~~~~~~~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~~ 276 (395)
T TIGR03526 210 PILKELSQLNANLVE-------------DPFLGKGTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRNL 276 (395)
T ss_pred HHHHHHHHhhhhhcC-------------CcccCccceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 999999876532100 0222357899999998334899999999999999999999999999999887
Q ss_pred HHHHHHHhCceEEEEe-----------------e---------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHH-HHhh
Q 017774 298 LYQICEKRSVSCIVER-----------------K---------LKSASYAALKRMTGATQHEIPVIMSGAGHDAM-AMSH 350 (366)
Q Consensus 298 ~~~~~~~~~~~~~v~~-----------------~---------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~-~~~~ 350 (366)
++.. ..+.++++.. . +.+.+.++++++++. .+.....++++|++ ++++
T Consensus 277 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~ 351 (395)
T TIGR03526 277 PAVQ--GAEAEVEMYEYDRPSYTGLVYPTECYFPTWVLPEDHLITKAALETYKRLFGK---EPGVDKWTFSTNGVSIMGR 351 (395)
T ss_pred HHhc--CCcceEEEeccccccccccccccccccCccccCCCCHHHHHHHHHHHHHhCC---CCceeeeeeecccceehhh
Confidence 6542 1123333210 0 344555555555543 22222345677874 4555
Q ss_pred h-cCEEEEEEee
Q 017774 351 L-TKVCSLLCRL 361 (366)
Q Consensus 351 ~-iP~~~~~~g~ 361 (366)
. +|++ .|.|.
T Consensus 352 ~g~p~v-~~Gpg 362 (395)
T TIGR03526 352 HGIPVI-GFGPG 362 (395)
T ss_pred cCCCEE-EECCc
Confidence 5 8988 45443
No 47
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=7.2e-33 Score=261.79 Aligned_cols=269 Identities=18% Similarity=0.199 Sum_probs=200.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccC-------------CCCCCHHHHH
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA-------------GIFDGSLGII 67 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g-------------g~~D~k~gi~ 67 (366)
.|++|.++++||.++|+++|++++.+..+|+++.. +. +.|+|+|+|||||||.. |+.|||++++
T Consensus 12 ~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~-~~--~~~~i~~~~H~D~vp~~~~~~~~~g~i~GrG~~D~Kg~~a 88 (336)
T TIGR01902 12 PSGKEANAAKFLEEISKDLGLKLIIDDAGNFILGK-GD--GHKKILLAGHVDTVPGYIPVKIEGGLLYGRGAVDAKGPLI 88 (336)
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEECCCCcEEEEe-CC--CCceEEEEccccccCCCcccEEeCCEEEEecccCCCcHHH
Confidence 37889999999999999999999777788988876 32 25999999999999743 7889999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchhhhh
Q 017774 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESL 147 (366)
Q Consensus 68 ~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~ 147 (366)
++|++++.|++.+ .+|.|++++|||+++ .|++.++...
T Consensus 89 a~l~a~~~l~~~~------~~i~~~~~~dEE~g~-----~G~~~~~~~~------------------------------- 126 (336)
T TIGR01902 89 AMIFATWLLNEKG------IKVIVSGLVDEESSS-----KGAREVIDKN------------------------------- 126 (336)
T ss_pred HHHHHHHHHHhCC------CcEEEEEEeCcccCC-----ccHHHHHhhc-------------------------------
Confidence 9999999997653 589999999999863 6899876210
Q ss_pred hhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-H
Q 017774 148 LQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLER-L 226 (366)
Q Consensus 148 ~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~-~ 226 (366)
.++ .+ +..||. +. ..+..+++|..+++++++|+++|+|. | + ||+..+.+++..|.. +
T Consensus 127 -----~~~--~~---ii~ept------~~-~~i~~~~kG~~~~~v~~~G~~~Hss~-~-~---~ai~~~~~~~~~l~~~~ 184 (336)
T TIGR01902 127 -----YPF--YV---IVGEPS------GA-EGITLGYKGSLQLKIMCEGTPFHSSS-A-G---NAAELLIDYSKKIIEVY 184 (336)
T ss_pred -----CCC--EE---EEecCC------CC-cceeeeeeeEEEEEEEEEecCcccCC-C-h---hHHHHHHHHHHHHHHHh
Confidence 011 12 233432 21 12567899999999999999999998 6 3 499999999999873 3
Q ss_pred hcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhC
Q 017774 227 CKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS 306 (366)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~ 306 (366)
..+. .. ...+++++.+++ |.+.|+||++|++++|+|+.|.++.+++.++|++ ...
T Consensus 185 ~~~~----------------~~-~~~~~~~~~i~g-g~~~nvIP~~a~~~idiR~~p~~~~~~~~~~i~~-------~~~ 239 (336)
T TIGR01902 185 KQPE----------------NY-DKPSIVPTIIRF-GESYNDTPAKLELHFDLRYPPNNKPEEAIKEITD-------KFP 239 (336)
T ss_pred cccc----------------CC-CCCcceeEEEEc-cCCCcCCCceEEEEEEEeeCCCCCHHHHHHHHHh-------ccC
Confidence 2210 11 235788999999 8999999999999999999999999988887765 123
Q ss_pred ceEEEEee-------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh--cCEEEEEEeeC
Q 017774 307 VSCIVERK-------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL--TKVCSLLCRLN 362 (366)
Q Consensus 307 ~~~~v~~~-------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~--iP~~~~~~g~~ 362 (366)
+++++... ..+++.+++++++.+.+..+....++|++|+++|++. +|++. |.|+.
T Consensus 240 ~~~~~~~~~~p~~~~~~~~lv~~~~~a~~~~~~~~~~~~~~g~tD~~~~~~~~g~p~v~-~Gpg~ 303 (336)
T TIGR01902 240 ICLEIVDETPPYKVSRNNPLVRAFVRAIRKQGMKPRLKKKTGTSDMNILAPIWTVPMVA-YGPGD 303 (336)
T ss_pred ceEEEEeccCceecCCCCHHHHHHHHHHHHcCCCeEEeeccccCccceeccccCCCeEE-ECCCC
Confidence 44443322 2355666666665544433343345688999999875 67763 55543
No 48
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=9.8e-33 Score=271.14 Aligned_cols=300 Identities=17% Similarity=0.121 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHHHcCCE-EEEc---CcCCEEEEecCCCCCCCeEEEecccCccccC---------------------
Q 017774 3 PASVRAGNLIRQWMEDAGLR-TWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------- 57 (366)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~-~~~~---~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------------------- 57 (366)
.+|.++++||.++|+++||+ +++. ..+|+++++.+. ++.|+|+|+||+||||.+
T Consensus 37 ~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~-~~~~~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyG 115 (456)
T PRK08201 37 EDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHA-PGKPTVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYA 115 (456)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCC-CCCCEEEEEeccCCcCCCchhcccCCCCceEeECCEEEE
Confidence 36789999999999999996 5443 345799988654 345899999999999853
Q ss_pred -CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHH
Q 017774 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALR 136 (366)
Q Consensus 58 -g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~ 136 (366)
|+.|||++++++|++++.|++.+. .++++|.|++++|||.++ .|+..++....
T Consensus 116 RG~~DmKgglaa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~l~~~~------------------- 169 (456)
T PRK08201 116 RGASDDKGQVFMHLKAVEALLKVEG--TLPVNVKFCIEGEEEIGS-----PNLDSFVEEEK------------------- 169 (456)
T ss_pred EecccCcHHHHHHHHHHHHHHHhcC--CCCCCEEEEEEcccccCC-----ccHHHHHHhhH-------------------
Confidence 677999999999999999988765 678899999999999864 46666542100
Q ss_pred HCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCC--CCCCCCCCCCCCHHH
Q 017774 137 ENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQG--HAGTVPMSMRQDPMT 214 (366)
Q Consensus 137 ~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~--Has~~p~~~g~NAi~ 214 (366)
+ .+.+|.+ +..|++.. .. ....++.+++|..|++|+++|+++ |||.++ ..+.|||.
T Consensus 170 ~-------------~~~~d~~-----ii~e~~~~-~~--~~~~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~-~~~~nAi~ 227 (456)
T PRK08201 170 D-------------KLAADVV-----LISDTTLL-GP--GKPAICYGLRGLAALEIDVRGAKGDLHSGLYG-GAVPNALH 227 (456)
T ss_pred H-------------hccCCEE-----EEeCCCcC-CC--CCEEEEEecCCeEEEEEEEEeCCCCCcccccc-CcCCCHHH
Confidence 0 1112211 23343311 01 112377889999999999999998 999855 55689999
Q ss_pred HHHHHHHHHHHHhcC-----CCCCcc----------cCC-----------CCCCccccc-------CCCCcEEEEEEEEe
Q 017774 215 AAAELIVLLERLCKH-----PKDFLS----------YDG-----------RSNCSTLES-------LSSSLVCTVGEISS 261 (366)
Q Consensus 215 ~~a~~i~~l~~~~~~-----~~~~~~----------~~~-----------~~~~~~~~~-------~~~~~~~~~~~I~g 261 (366)
.++++|.+|+++..+ +.+.+. ... ........+ .....++|++.|+|
T Consensus 228 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~g 307 (456)
T PRK08201 228 ALVQLLASLHDEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYG 307 (456)
T ss_pred HHHHHHHhcCCCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeec
Confidence 999999999753211 000000 000 000000000 00145899999987
Q ss_pred cCC----CcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-------------ehHHHHHHHH
Q 017774 262 WPS----ASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------------LKSASYAALK 324 (366)
Q Consensus 262 ~g~----~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-------------~~~~l~~~~~ 324 (366)
|. ..|+||++|++.+|+|+.|.++.+++.++|++++++.. ..++++++... +.+.+.++++
T Consensus 308 -g~~~~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~~l~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~a~~ 385 (456)
T PRK08201 308 -GFQGEGTKTVIPAEAHAKITCRLVPDQDPQEILDLIEAHLQAHT-PAGVRVTIRRFDKGPAFVAPIDHPAIQAAARAYE 385 (456)
T ss_pred -CCCCCCCceEECcceEEEEEEEeCCCCCHHHHHHHHHHHHHHhC-CCCeEEEEEECCCcCceecCCCCHHHHHHHHHHH
Confidence 54 37999999999999999999999999999999887532 23455555421 2344445555
Q ss_pred HHhhccCCCCCCCCCchhh---HHHHHhhh-cCEEEE
Q 017774 325 RMTGATQHEIPVIMSGAGH---DAMAMSHL-TKVCSL 357 (366)
Q Consensus 325 ~~~g~~~~~~~~~~~~ggt---D~~~~~~~-iP~~~~ 357 (366)
++++ ..+.... .|++ |+.++... +|++.+
T Consensus 386 ~~~g---~~~~~~~-~gg~~~~~~~~~~~~gip~v~~ 418 (456)
T PRK08201 386 AVYG---TEAAFTR-MGGSIPVVETFSSQLHIPIVLM 418 (456)
T ss_pred HHhC---CCceecC-CCCcHHHHHHHHHHhCCCEEEe
Confidence 5444 2222222 3444 67666555 899854
No 49
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-32 Score=266.96 Aligned_cols=300 Identities=30% Similarity=0.350 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcCcC------CEEEEecCCCCCCCeEEEecccCccccC-------------------
Q 017774 3 PASVRAGNLIRQWMEDAGLRTWVDHLG------NVHGRVEGLNASAQALLIGSHLDTVVDA------------------- 57 (366)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~~~g------nvia~~~g~~~~~~~i~l~~H~D~Vp~g------------------- 57 (366)
..+.++++|+.++|+++|+.++.+..+ |+++++.+..++ |+|+|+||+||||.+
T Consensus 31 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~-~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~l 109 (409)
T COG0624 31 GEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGG-PTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKL 109 (409)
T ss_pred ccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCC-CeEEEeccccccCCCCcccCccCCCccEEECCEE
Confidence 568999999999999999987765444 899999776533 999999999999986
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHH
Q 017774 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (366)
Q Consensus 58 ---g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~ 134 (366)
|..|||++++++++|++.+.+.+. .++++|.+++++|||+++ .|++.+......
T Consensus 110 yGRG~~D~KG~~~a~l~A~~~l~~~~~--~~~~~v~~~~~~dEE~g~-----~~~~~~~~~~~~---------------- 166 (409)
T COG0624 110 YGRGAADMKGGLAAALYALSALKAAGG--ELPGDVRLLFTADEESGG-----AGGKAYLEEGEE---------------- 166 (409)
T ss_pred EecCccccchHHHHHHHHHHHHHHhCC--CCCeEEEEEEEeccccCC-----cchHHHHHhcch----------------
Confidence 667999999999999999999876 889999999999999974 355555421100
Q ss_pred HHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHH
Q 017774 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMT 214 (366)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~ 214 (366)
..+ +.+| .+++.|+ ..+..... .++.+.+|..+++|+++|+++|+|..+++.+.|++.
T Consensus 167 --~~~------------~~~d-----~~i~~E~--~~~~~~~~-~~~~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~ 224 (409)
T COG0624 167 --ALG------------IRPD-----YEIVGEP--TLESEGGD-IIVVGHKGSLWLEVTVKGKAGHASTTPPDLGRNPIH 224 (409)
T ss_pred --hhc------------cCCC-----EEEeCCC--CCcccCCC-eEEEcceeEEEEEEEEEeecccccccCCcccccHHH
Confidence 001 1122 2367776 12222233 345589999999999999999999853379999554
Q ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCC-CcEEEEEEEEec-------CCCcceeCCeEEEEEEeeCCChHH
Q 017774 215 AAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSS-SLVCTVGEISSW-------PSASNVIPGEVTFTVDLRAIDDAG 286 (366)
Q Consensus 215 ~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~I~g~-------g~~~NvIP~~~~~~~diR~~~~~~ 286 (366)
.+.+.+.++.....+... +... +.+++++.+.++ |...|+||++|++.+|+|+.|.++
T Consensus 225 ~a~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~ 290 (409)
T COG0624 225 AAIEALAELIEELGDLAG--------------EGFDGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGED 290 (409)
T ss_pred HHHHHHHHHHHHhccccc--------------ccccCCccccccccccCCcccccCCccCceecceEEEEEEEecCCcCC
Confidence 444444444332221100 0111 345555555541 334699999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCceEEEEe--e-------ehHHHHHHHHHHhhc-cCCCCCCCCCchhhHHHHHhhh-cCEE
Q 017774 287 RETVLYELSNQLYQICEKRSVSCIVER--K-------LKSASYAALKRMTGA-TQHEIPVIMSGAGHDAMAMSHL-TKVC 355 (366)
Q Consensus 287 ~~~~~~~i~~~~~~~~~~~~~~~~v~~--~-------~~~~l~~~~~~~~g~-~~~~~~~~~~~ggtD~~~~~~~-iP~~ 355 (366)
.+++.+.|++.++..+...++++++.. . ....+.+++.+...+ .|.+...+.+++++|+.+++.. +| +
T Consensus 291 ~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~g~~~~~~~~G~~~da~~~~~~~~~-~ 369 (409)
T COG0624 291 LDDVLEELEAELRAIAPKEGVEYEIEPGLGEPPLPVPGDSPLVAALAEAAEELLGLPPEVSTGGGTHDARFFARLGIP-A 369 (409)
T ss_pred HHHHHHHHHHHHHHhccccCceEEeccccCCccccCCCchHHHHHHHHHHHHhhCCCceecCCCCcchHHHHHhcCCe-e
Confidence 999999999999887665677777763 1 334444544444433 2343344455566999999998 58 8
Q ss_pred EEEEeeCC
Q 017774 356 SLLCRLNN 363 (366)
Q Consensus 356 ~~~~g~~~ 363 (366)
+.|.|+..
T Consensus 370 ~~fgp~~~ 377 (409)
T COG0624 370 VIFGPGDI 377 (409)
T ss_pred EEECCCCc
Confidence 88888764
No 50
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.8e-33 Score=254.50 Aligned_cols=299 Identities=19% Similarity=0.193 Sum_probs=218.6
Q ss_pred HHHHHHHHHHHHcCCEEEE----cCcCCEEEEecCCCCCCCeEEEecccCccccC----------------------CCC
Q 017774 7 RAGNLIRQWMEDAGLRTWV----DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA----------------------GIF 60 (366)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~----~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g----------------------g~~ 60 (366)
.+++|+..+.+++|..++. ....+++.+|.|++|..+.|+|++|+||||+. |+.
T Consensus 49 a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~e~W~h~Pfsa~~~~~g~IyaRGaq 128 (420)
T KOG2275|consen 49 ACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFREKWTHPPFSAFKDEDGNIYARGAQ 128 (420)
T ss_pred HHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCcccCccCCccccccCCCcEEecccc
Confidence 6899999999999987642 12346999999999999999999999999852 889
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCC
Q 017774 61 DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSI 140 (366)
Q Consensus 61 D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~ 140 (366)
|||+-.++.|.|++.|+..|. +++++|.+.|++|||.++ ..|++.++...+
T Consensus 129 D~K~~~va~leAir~L~~~g~--kp~Rti~lsfvpDEEi~G----~~Gm~~fa~~~~----------------------- 179 (420)
T KOG2275|consen 129 DMKCVGVAYLEAIRNLKASGF--KPKRTIHLSFVPDEEIGG----HIGMKEFAKTEE----------------------- 179 (420)
T ss_pred chHhHHHHHHHHHHHHHhcCC--CcCceEEEEecCchhccC----cchHHHHhhhhh-----------------------
Confidence 999999999999999999998 999999999999999886 368988874111
Q ss_pred CchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHH
Q 017774 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELI 220 (366)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i 220 (366)
|..+.+ +| +--|++. ++.. ..-+.+++||..|++|+++|++||+|.+| -..|+.++.++|
T Consensus 180 -----------~~~l~~-~f--ilDEG~~-se~d--~~~vfyaEkg~w~~~v~~~G~~GHss~~~---~nTa~~~l~klv 239 (420)
T KOG2275|consen 180 -----------FKKLNL-GF--ILDEGGA-TEND--FATVFYAEKGPWWLKVTANGTPGHSSYPP---PNTAIEKLEKLV 239 (420)
T ss_pred -----------hcccce-eE--EecCCCC-Cccc--ceeEEEEeeceeEEEEEecCCCCCCCCCC---CccHHHHHHHHH
Confidence 000111 11 0112211 1111 11145789999999999999999999955 478999999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHH-HHHHH
Q 017774 221 VLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYEL-SNQLY 299 (366)
Q Consensus 221 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i-~~~~~ 299 (366)
..+.+.+..+.++++..+... ..+.+|+|++.|+| |.+.|++|.+.++.+|+|..+..+.+++.+++ +++++
T Consensus 240 ~~~~~fr~~q~~~l~~~p~~~------~~~vtT~Nv~~i~G-Gv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l~~~w~~ 312 (420)
T KOG2275|consen 240 ESLEEFREKQVDLLASGPKLA------LGDVTTINVGIING-GVQSNVLPETFEAAFDIRVRPHVDVKAIRDQLEDEWAE 312 (420)
T ss_pred HHHHHhHHHHHHHhhcCCcee------ccceeEEeeeeeec-ccccCcCchhheeeeeeEeccCCCHHHHHHHHHHHhhh
Confidence 999988744333232222221 23689999999999 99999999999999999999999999999999 77765
Q ss_pred HHHHHhCceEEEEee------------ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhhcCEEEEEEeeCC
Q 017774 300 QICEKRSVSCIVERK------------LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRLNN 363 (366)
Q Consensus 300 ~~~~~~~~~~~v~~~------------~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~~~ 363 (366)
+. ..+.++++... -+.+++.++..+..+.+....+..++|+||.+|+++..-.++.|.|+-|
T Consensus 313 ~~--~eg~t~~f~~~~~~~~~~~t~~~~s~p~w~~~~~a~~~~~~k~~~~i~~gstdsr~~rn~gvp~~~fsp~~n 386 (420)
T KOG2275|consen 313 EA--GEGVTLEFSQKVILDYPPVTPTDDSNPFWTAFAGALKDEGGKGYPEIGPGSTDSRHIRNEGVPAIGFSPIIN 386 (420)
T ss_pred hc--CCceEEeccCcccCCCCCCCCCCCCChHHHHHHHHHHHhcCccceeecccccccchhhhcCcchhccccccc
Confidence 43 23455554332 1345555555554443322233346799999999998333446666544
No 51
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=3e-32 Score=259.58 Aligned_cols=268 Identities=16% Similarity=0.105 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCc----CCEEEEecCCCCCCCeEEEecccCccccC--------------------CC
Q 017774 4 ASVRAGNLIRQWMEDAGLRTWVDHL----GNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GI 59 (366)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~----gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------------------g~ 59 (366)
+|.++++||.++|+ |+++++++. .|+++.. | .|+|+|+||+||||.+ |+
T Consensus 28 ~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~-g----~~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa 100 (364)
T PRK08737 28 TTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVR-G----TPKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGV 100 (364)
T ss_pred CcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEc-C----CCeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECc
Confidence 57899999999997 998876543 3888863 3 2789999999999863 67
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCC
Q 017774 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (366)
Q Consensus 60 ~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g 139 (366)
.|||++++++|+|++. +.++|.|+|++|||.++ ..|++.++. .+
T Consensus 101 ~DmKg~~aa~l~a~~~---------~~~~v~~~~~~dEE~g~----~~g~~~~~~-----------------------~~ 144 (364)
T PRK08737 101 CDIKGAAAALLAAANA---------GDGDAAFLFSSDEEAND----PRCVAAFLA-----------------------RG 144 (364)
T ss_pred ccchHHHHHHHHHHHc---------cCCCEEEEEEcccccCc----hhhHHHHHH-----------------------hC
Confidence 7999999999999763 24689999999999863 136666642 11
Q ss_pred CCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHH
Q 017774 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAEL 219 (366)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~ 219 (366)
. .+|.+ +..|| .. ..++.+++|..+++|+++|+++|+|.+| +.|.|||..++++
T Consensus 145 ~------------~~~~~-----iv~Ep------t~--~~~~~~~kG~~~~~v~v~Gk~aHas~p~-~~G~NAI~~~~~~ 198 (364)
T PRK08737 145 I------------PYEAV-----LVAEP------TM--SEAVLAHRGISSVLMRFAGRAGHASGKQ-DPSASALHQAMRW 198 (364)
T ss_pred C------------CCCEE-----EEcCC------CC--ceeEEecceeEEEEEEEEeeccccCCCc-ccCCCHHHHHHHH
Confidence 1 12211 22233 22 2366889999999999999999999955 6899999999999
Q ss_pred HHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHH
Q 017774 220 IVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLY 299 (366)
Q Consensus 220 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~ 299 (366)
|.++.+....... +.++ +. .+.++|++.|+| |.+.|+||++|++++|+|+.|.++.+++.++|++.++
T Consensus 199 l~~~~~~~~~~~~-----~~~~-----~~-~~~t~~vg~i~G-G~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~~~~ 266 (364)
T PRK08737 199 GGQALDHVESLAH-----ARFG-----GL-TGLRFNIGRVEG-GIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFAE 266 (364)
T ss_pred HHHHHHHHHhhhh-----hccC-----CC-CCCceEEeeEec-CCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHHHHH
Confidence 9886554221100 0000 11 256999999999 8999999999999999999999999999999977665
Q ss_pred HHHHHhCceEEEEee------e----hHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEE
Q 017774 300 QICEKRSVSCIVERK------L----KSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSL 357 (366)
Q Consensus 300 ~~~~~~~~~~~v~~~------~----~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~ 357 (366)
. ...++++... . ...+...++++..+.+.+... ..+++||+++|++. +|++.+
T Consensus 267 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~tDa~~~~~~Gip~v~~ 330 (364)
T PRK08737 267 P----AAATFEETFRGPSLPSGDIARAEERRLAARDVADALDLPIGN-AVDFWTEASLFSAAGYTALVY 330 (364)
T ss_pred H----cCCceEEEeccCCCCCcccCcchHHHHHHHHHHhhhcCCCCc-eeccccCHHHHHHcCCCEEEE
Confidence 3 2333433221 1 122222223333223333222 34579999999887 999854
No 52
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=1.2e-31 Score=264.03 Aligned_cols=303 Identities=16% Similarity=0.113 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHHcCCEEEEc---CcCCEEEEecCCCCCCCeEEEecccCccccC------------------------
Q 017774 5 SVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA------------------------ 57 (366)
Q Consensus 5 E~~~~~~l~~~l~~~G~~~~~~---~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g------------------------ 57 (366)
+.++++||.++|+++|+++++. ...|++++++|.+++.|+|+|+||+||||.+
T Consensus 42 ~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~l 121 (464)
T PRK09104 42 CRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVI 121 (464)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceE
Confidence 5789999999999999988642 2457999997654456999999999999742
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHH
Q 017774 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDA 134 (366)
Q Consensus 58 ---g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~ 134 (366)
|+.|||++++++|+|++.|++.+. +++++|.|+|++|||.++ .|++.++....+
T Consensus 122 yGRG~~D~Kg~laa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~l~~~~~---------------- 178 (464)
T PRK09104 122 VARGASDDKGQLMTFVEACRAWKAVTG--SLPVRVTILFEGEEESGS-----PSLVPFLEANAE---------------- 178 (464)
T ss_pred EEecccCCcHHHHHHHHHHHHHHHhcC--CCCCcEEEEEECccccCC-----ccHHHHHHhhHH----------------
Confidence 346999999999999999999765 788999999999999864 366655421000
Q ss_pred HHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEe--CCCCCCCCCCCCCCCH
Q 017774 135 LRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG--SQGHAGTVPMSMRQDP 212 (366)
Q Consensus 135 ~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G--~~~Has~~p~~~g~NA 212 (366)
.+.+|.+ +..|++.. ......++++++|..+++++++| +++|+|.+| +.+.||
T Consensus 179 ----------------~~~~d~~-----iv~E~~~~---~~~~~~i~~~~kG~~~~~l~v~g~~~~~Hss~~~-~~g~na 233 (464)
T PRK09104 179 ----------------ELKADVA-----LVCDTGMW---DRETPAITTSLRGLVGEEVTITAADRDLHSGLFG-GAAANP 233 (464)
T ss_pred ----------------hcCCCEE-----EEeCCCCC---CCCCeEEEeecCCeEEEEEEEEeCCCCccccccC-CccCCH
Confidence 0112222 23343210 01112366789999999999999 789999867 789999
Q ss_pred HHHHHHHHHHHHHHhcCC-CC-------Ccc-----------cCCC-C-CCccc-ccC-----------CCCcEEEEEEE
Q 017774 213 MTAAAELIVLLERLCKHP-KD-------FLS-----------YDGR-S-NCSTL-ESL-----------SSSLVCTVGEI 259 (366)
Q Consensus 213 i~~~a~~i~~l~~~~~~~-~~-------~~~-----------~~~~-~-~~~~~-~~~-----------~~~~~~~~~~I 259 (366)
+..+++++.+|+....+. .. .++ .... + .+..+ .|. ...+++|++.|
T Consensus 234 i~~~~~~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i 313 (464)
T PRK09104 234 IRVLTRILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGI 313 (464)
T ss_pred HHHHHHHHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEecc
Confidence 999999999986532110 00 000 0000 0 00000 000 12468999999
Q ss_pred EecCC----CcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-------------ehHHHHHH
Q 017774 260 SSWPS----ASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------------LKSASYAA 322 (366)
Q Consensus 260 ~g~g~----~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-------------~~~~l~~~ 322 (366)
++ |. ..|+||++|++++|+|+.|+++.+++.+.|++.+++. ...+.++++... +...+.++
T Consensus 314 ~g-g~~~~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~~l~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~v~~l~~~ 391 (464)
T PRK09104 314 WG-GYTGEGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRAYVRAR-LPADCSVEFHDHGGSPAIALPYDSPALAAAKAA 391 (464)
T ss_pred cc-CCCCCCCccEecCceEEEEEEEeCCCCCHHHHHHHHHHHHHHh-CCCCeEEEEEecCCCCceECCCCCHHHHHHHHH
Confidence 98 64 5799999999999999999999999999999988652 123444544321 23444445
Q ss_pred HHHHhhccCCCCCCCCCchhh-HHHHHhhh--cCEEEEEEe
Q 017774 323 LKRMTGATQHEIPVIMSGAGH-DAMAMSHL--TKVCSLLCR 360 (366)
Q Consensus 323 ~~~~~g~~~~~~~~~~~~ggt-D~~~~~~~--iP~~~~~~g 360 (366)
++++++. ++....++|++ |++.|.+. +|++.+..|
T Consensus 392 ~~~~~~~---~~~~~~~~g~~~~~~~~~~~~gip~v~~g~G 429 (464)
T PRK09104 392 LSDEWGK---PAVLIGSGGSIPIVGDFKRILGMDSLLVGFG 429 (464)
T ss_pred HHHHhCC---CceecCCCCcHHHHHHHHHHhCCCEEEecCC
Confidence 5554432 22223344554 45666543 898754433
No 53
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-31 Score=260.47 Aligned_cols=292 Identities=22% Similarity=0.210 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHHHcCC-EEEE---cCcCCEEEEecCCCCCCCeEEEecccCccccC----------------------
Q 017774 4 ASVRAGNLIRQWMEDAGL-RTWV---DHLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------- 57 (366)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~-~~~~---~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------------- 57 (366)
+|.++++||.++|+++|+ ++++ +..+|+++++++.. +.|+|+|+||+||||++
T Consensus 42 ~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~-~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGr 120 (449)
T PRK07907 42 EVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPP-GAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGR 120 (449)
T ss_pred hHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCC-CCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEEC
Confidence 478999999999999998 6765 35679999997643 35899999999999973
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHH
Q 017774 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRE 137 (366)
Q Consensus 58 g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~ 137 (366)
|+.|||++++++|+|+++| +. +++++|.|++++|||+++ .|++.+++....
T Consensus 121 G~~D~Kg~~aa~l~a~~~l---~~--~~~~~i~~~~~~dEE~g~-----~g~~~~l~~~~~------------------- 171 (449)
T PRK07907 121 GAADDKGGIAMHLAALRAL---GG--DLPVGVTVFVEGEEEMGS-----PSLERLLAEHPD------------------- 171 (449)
T ss_pred CccCCcHHHHHHHHHHHHh---cc--CCCCcEEEEEEcCcccCC-----ccHHHHHHhchH-------------------
Confidence 7789999999999999999 33 677999999999999864 478877631100
Q ss_pred CCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEE--eCCCCCCCCCCCCCCCHHHH
Q 017774 138 NSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVR--GSQGHAGTVPMSMRQDPMTA 215 (366)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~--G~~~Has~~p~~~g~NAi~~ 215 (366)
.+.+|.+ +..|++.. ..+.+ .+..+++|..+++++++ |+++|+|.++ ..+.||+..
T Consensus 172 -------------~~~~d~~-----iv~E~~~~--~~~~p-~i~~~~kG~~~~~l~v~~~G~~~Hss~~~-~~~~nAi~~ 229 (449)
T PRK07907 172 -------------LLAADVI-----VIADSGNW--SVGVP-ALTTSLRGNADVVVTVRTLEHAVHSGQFG-GAAPDALTA 229 (449)
T ss_pred -------------hhcCCEE-----EEecCCcC--CCCCe-EEEEecCCcEEEEEEEEECCCCCCCcccc-ccCCCHHHH
Confidence 0112211 23343311 01111 26678999999999999 8999999855 678999999
Q ss_pred HHHHHHHHHHHhcCCC-CCcc-c-CCCCCCc----------------------ccccCCCCcEEEEEEEEec--CCCcce
Q 017774 216 AAELIVLLERLCKHPK-DFLS-Y-DGRSNCS----------------------TLESLSSSLVCTVGEISSW--PSASNV 268 (366)
Q Consensus 216 ~a~~i~~l~~~~~~~~-~~~~-~-~~~~~~~----------------------~~~~~~~~~~~~~~~I~g~--g~~~Nv 268 (366)
++++|.+|++...+.. ..+. . .....+. .....-..++++++.|+++ |...|+
T Consensus 230 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nv 309 (449)
T PRK07907 230 LVRLLATLHDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNA 309 (449)
T ss_pred HHHHHHhhCCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCE
Confidence 9999999976422100 0000 0 0000000 0000012568899999862 468899
Q ss_pred eCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-------------ehHHHHHHHHHHhhccCCCCC
Q 017774 269 IPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------------LKSASYAALKRMTGATQHEIP 335 (366)
Q Consensus 269 IP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-------------~~~~l~~~~~~~~g~~~~~~~ 335 (366)
||++|++++|+|+.|+++.+++.+.|+++++... .++.+++++.. +.+.+.+++++++| .++.
T Consensus 310 IP~~a~~~~diR~~p~~~~e~v~~~l~~~l~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~a~~~~~g---~~~~ 385 (449)
T PRK07907 310 LPPSARARLSLRVAPGQDAAEAQDALVAHLEAHA-PWGAHVTVERGDAGQPFAADASGPAYDAARAAMREAWG---KDPV 385 (449)
T ss_pred ecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcC-CCCcEEEEEECCCcCceeCCCCCHHHHHHHHHHHHHhC---CCce
Confidence 9999999999999999999999999999887642 23455555432 34455555555554 3333
Q ss_pred CCCCchhhHH-HHHhhh
Q 017774 336 VIMSGAGHDA-MAMSHL 351 (366)
Q Consensus 336 ~~~~~ggtD~-~~~~~~ 351 (366)
....+|++++ +.|.+.
T Consensus 386 ~~~~~g~~~~~~~~~~~ 402 (449)
T PRK07907 386 DMGMGGSIPFIAELQEA 402 (449)
T ss_pred ecCCCCcHHHHHHHHHh
Confidence 3334455442 345443
No 54
>PRK07318 dipeptidase PepV; Reviewed
Probab=99.98 E-value=6.2e-31 Score=258.79 Aligned_cols=321 Identities=19% Similarity=0.118 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccC--------------------CCCCCH
Q 017774 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIFDGS 63 (366)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------------------g~~D~k 63 (366)
+|.++++||.++|+++|++++.. .|+++++.... +.++|+|+||+||||.+ |+.|||
T Consensus 44 ~~~~~~~~l~~~~~~~G~~~~~~--~n~~~~~~~~~-~~~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmK 120 (466)
T PRK07318 44 GPVKALEKFLEIAERDGFKTKNV--DNYAGHIEYGE-GEEVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDK 120 (466)
T ss_pred cHHHHHHHHHHHHHHCCCEEEEe--cCccceEEECC-CCCEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCc
Confidence 47789999999999999998643 47776654322 34899999999999864 667999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccc-cCCCC-CcHHHHHHHCCCC
Q 017774 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRV-SDKSG-VTVLDALRENSID 141 (366)
Q Consensus 64 ~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~-~d~~g-~~~~~~~~~~g~~ 141 (366)
+|++++++|++.|++.++ +++++|.|+|++|||.++ .|++++++......+.. .|... +... +.|..
T Consensus 121 gg~aa~l~Al~~l~~~g~--~~~~~i~l~~~~DEE~g~-----~G~~~l~~~~~~~~~~~~~d~~~~vi~~----E~g~~ 189 (466)
T PRK07318 121 GPTMAAYYALKIIKELGL--PLSKKVRFIVGTDEESGW-----KCMDYYFEHEEAPDFGFSPDAEFPIING----EKGIT 189 (466)
T ss_pred HHHHHHHHHHHHHHHcCC--CCCccEEEEEEcccccCc-----hhHHHHHHhCCCCCEEEEeCCCCcEEEE----EeeeE
Confidence 999999999999999987 788999999999999874 59999875321110000 01000 0000 00000
Q ss_pred chhhhhhhccCCCCcc-ceeeEeeccCCccccccCcc-cc------------------eEEeeee-----ceEEEEEEEe
Q 017774 142 IAEESLLQLKYDPASV-WGYIEVHIEQGPVLEWVGFP-LG------------------VVQGIAG-----QTRLKVTVRG 196 (366)
Q Consensus 142 ~~~~~~~~~~~~~~~~-~a~~~~~~e~~~~~~~~~~~-~~------------------~~~~~~g-----~~~~~v~v~G 196 (366)
. ..... ....... ..+ ...++|......... .. +..++|| ..|++|+++|
T Consensus 190 ~-~~~~~--~~~~~~~~~~~--~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~kG~~~~~~~~~~i~v~G 264 (466)
T PRK07318 190 T-FDLVH--FEGENEGDYVL--VSFKSGLRENMVPDSAEAVITGDDLDDLIAAFEAFLAENGLKGELEEEGGKLVLTVIG 264 (466)
T ss_pred E-EEEEe--ccccCCCCcee--EEEEcCccceecCcccEEEEecCCHHHHHHHHHHHHhhcCceEEEEecCCEEEEEEEe
Confidence 0 00000 0000000 000 011111100000000 00 0013455 4489999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHH------Hhc---CCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcc
Q 017774 197 SQGHAGTVPMSMRQDPMTAAAELIVLLER------LCK---HPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASN 267 (366)
Q Consensus 197 ~~~Has~~p~~~g~NAi~~~a~~i~~l~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~N 267 (366)
+++|+|. | +.|.|||..|+++|..|+. +.+ .................+...+..++|++.|++ |...
T Consensus 265 ~aaH~s~-p-~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~nvg~i~g-g~~~- 340 (466)
T PRK07318 265 KSAHGST-P-EKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGIAYEDDVMGDLTMNVGVFSF-DEEK- 340 (466)
T ss_pred eEcccCC-C-ccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCCcccCCCccCeEEEeeEEEE-ecCc-
Confidence 9999998 8 8999999999999999863 100 000000000000000001122467999999998 4331
Q ss_pred eeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-------ehHHHHHHHHHHhhc-cCCCCCCCCC
Q 017774 268 VIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------LKSASYAALKRMTGA-TQHEIPVIMS 339 (366)
Q Consensus 268 vIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-------~~~~l~~~~~~~~g~-~~~~~~~~~~ 339 (366)
.|++++|+|+.|+++.+++.++|++.+++ .++++++... ...++.+.+++++.+ .+.++....+
T Consensus 341 ----~~~~~iDiR~~p~~~~~~v~~~i~~~~~~----~~~~~~~~~~~~p~~~~~d~~lv~~l~~a~~~~~g~~~~~~~~ 412 (466)
T PRK07318 341 ----GGTLGLNFRYPVGTDFEKIKAKLEKLIGV----TGVELSEHEHQKPHYVPKDDPLVKTLLKVYEKQTGLKGEEQVI 412 (466)
T ss_pred ----EEEEEEEEeCCCCCCHHHHHHHHHHHHHh----cCeEEEEccCCCceeeCCCCHHHHHHHHHHHHHhCCCCCeeEE
Confidence 79999999999999999999999888654 3555543211 234555666555543 3444444557
Q ss_pred chhhHHHHHhhhcCEE
Q 017774 340 GAGHDAMAMSHLTKVC 355 (366)
Q Consensus 340 ~ggtD~~~~~~~iP~~ 355 (366)
+|++|+++|...+|..
T Consensus 413 ~ggtDa~~~~~~i~~G 428 (466)
T PRK07318 413 GGGTYARLLKRGVAFG 428 (466)
T ss_pred cchHhHhhCCCeEEeC
Confidence 8999999998655533
No 55
>PRK07079 hypothetical protein; Provisional
Probab=99.98 E-value=3.5e-30 Score=253.77 Aligned_cols=299 Identities=17% Similarity=0.114 Sum_probs=195.5
Q ss_pred HHHHHHHHHH----HHHHHcCCEEEEc------CcCCEEEEecCCCCCCCeEEEecccCccccC----------------
Q 017774 4 ASVRAGNLIR----QWMEDAGLRTWVD------HLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------- 57 (366)
Q Consensus 4 ~E~~~~~~l~----~~l~~~G~~~~~~------~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------- 57 (366)
++.++++|+. ++|+++||++++. ...|+++++.+.. +.|+|+|+||+||||++
T Consensus 38 ~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~~-~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~ 116 (469)
T PRK07079 38 RAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIEDD-ALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEE 116 (469)
T ss_pred cHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCCC-CCCEEEEEcccCCCCCChHHhcccCCCCccccc
Confidence 4556777764 5899999998742 2357999986543 34899999999999842
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHhc-CCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCC
Q 017774 58 -------GIFDGSLGIITAISALKVLKST-GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGV 129 (366)
Q Consensus 58 -------g~~D~k~gi~~~l~a~~~l~~~-~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~ 129 (366)
|+.|||++++++|+|+++|++. +. +++++|.|++++|||+++ .|++.++.....
T Consensus 117 dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~--~~~~~i~~~~~~dEE~g~-----~G~~~l~~~~~~----------- 178 (469)
T PRK07079 117 GDRWYGRGTADNKGQHTINLAALEQVLAARGG--RLGFNVKLLIEMGEEIGS-----PGLAEVCRQHRE----------- 178 (469)
T ss_pred CCEEEEEeccCCcHHHHHHHHHHHHHHHhcCC--CCCCCEEEEEECccccCC-----ccHHHHHHHhHH-----------
Confidence 6789999999999999998754 45 789999999999999874 588887631100
Q ss_pred cHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEeC--CCCCCCCCCC
Q 017774 130 TVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRGS--QGHAGTVPMS 207 (366)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G~--~~Has~~p~~ 207 (366)
.+.+|.+ +..|++.. . .+ ...++.+++|..|++|+++|+ +.||+... .
T Consensus 179 ---------------------~~~~d~~-----iv~e~~~~-~-~~-~~~i~~g~kG~~~~~v~v~G~~~~~hs~~~~-g 228 (469)
T PRK07079 179 ---------------------ALAADVL-----IASDGPRL-S-AE-RPTLFLGSRGAVNFRLRVNLRDGAHHSGNWG-G 228 (469)
T ss_pred ---------------------hcCCCEE-----EEeCCCcc-C-CC-CeEEEEecceEEEEEEEEeeCCCCCCCCccc-c
Confidence 0112221 23343311 0 11 123678899999999999998 45666422 3
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCC-----C------------CCcccCC-----CCCC-c---cc---ccCCCCcEEEEEE
Q 017774 208 MRQDPMTAAAELIVLLERLCKHP-----K------------DFLSYDG-----RSNC-S---TL---ESLSSSLVCTVGE 258 (366)
Q Consensus 208 ~g~NAi~~~a~~i~~l~~~~~~~-----~------------~~~~~~~-----~~~~-~---~~---~~~~~~~~~~~~~ 258 (366)
.+.||+..++.+|.++.+...+. . ....... .+.. . .. .+....+++|++.
T Consensus 229 ~~~nai~~l~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~ 308 (469)
T PRK07079 229 LLRNPGTVLAHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLA 308 (469)
T ss_pred ccCCHHHHHHHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEe
Confidence 44799999999999885421100 0 0000000 0000 0 00 0001246899999
Q ss_pred EEecCC---CcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----------ehHHHHHHHH
Q 017774 259 ISSWPS---ASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-----------LKSASYAALK 324 (366)
Q Consensus 259 I~g~g~---~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-----------~~~~l~~~~~ 324 (366)
|++ |. ..|+||++|++++|+|+.|.++.+++.++|++++++.. ..++++++... +.+.+.++++
T Consensus 309 i~g-G~~~~~~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~~i~~~~-~~~v~~~~~~~~~p~~~~~~~~~v~~l~~a~~ 386 (469)
T PRK07079 309 FKT-GNPDAPVNAIPGSARAVCQLRFVVGTDWENLAPHLRAHLDAHG-FPMVEVTVERGSPATRLDPDDPWVRWALASIA 386 (469)
T ss_pred eec-CCCCCcceEecCceEEEEEEEcCCCCCHHHHHHHHHHHHHhcC-CCCeEEEEeCCCCceecCCCCHHHHHHHHHHH
Confidence 998 63 68999999999999999999999999999999887531 11234433221 2344444555
Q ss_pred HHhhccCCCCCCC-CCchhhHHHHHhh-h-cCEEE
Q 017774 325 RMTGATQHEIPVI-MSGAGHDAMAMSH-L-TKVCS 356 (366)
Q Consensus 325 ~~~g~~~~~~~~~-~~~ggtD~~~~~~-~-iP~~~ 356 (366)
++++. .+... ..+|++|.++|.. . +|++.
T Consensus 387 ~~~g~---~~~~~~~~~g~~d~~~~~~~~giP~v~ 418 (469)
T PRK07079 387 RTTGK---KPALLPNLGGSLPNDVFADILGLPTLW 418 (469)
T ss_pred HHhCC---CCceecCCCcchhHHHHHHHhCCCEEE
Confidence 54432 22221 2456779888875 3 99984
No 56
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=99.97 E-value=1.2e-29 Score=249.23 Aligned_cols=318 Identities=15% Similarity=0.089 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccC--------------------CCCCC
Q 017774 3 PASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIFDG 62 (366)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------------------g~~D~ 62 (366)
.++.++++++.++|+++||+++.. .|.++.+.+.. +.++|+|+|||||||++ |+.||
T Consensus 42 ~~~~~~~~~~~~~~~~~G~~~~~~--~~~~~~~~~~~-~~~~l~~~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~D~ 118 (466)
T TIGR01886 42 PGPVDALTKFLSFAERDGFTTKNF--DNYAGHVEYGA-GDERLGIIGHMDVVPAGEGWTRDPFEPEIDEGRIYARGASDD 118 (466)
T ss_pred hhHHHHHHHHHHHHHHCCCeEEEe--cCCceeEEecC-CCCEEEEEeecccCCCCCCCcCCCCCeEEECCEEEecCcccc
Confidence 467889999999999999998642 24444433322 34899999999999874 67799
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccc-cCCCC-CcHHHHHHHCCC
Q 017774 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRV-SDKSG-VTVLDALRENSI 140 (366)
Q Consensus 63 k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~-~d~~g-~~~~~~~~~~g~ 140 (366)
|++++++|+|+++|++.++ +++++|.|++++|||++. .|++++++......+.+ .|..- +... +.|.
T Consensus 119 Kg~~~a~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~~~~~~~~d~~~~~d~~~~~~~g----e~g~ 187 (466)
T TIGR01886 119 KGPSLAAYYAMKILKELGL--PPSKKIRFVVGTNEETGW-----VDMDYYFKHEETPDFGFSPDAEFPIING----EKGN 187 (466)
T ss_pred chHHHHHHHHHHHHHHhCC--CCCCCEEEEEECccccCc-----ccHHHHHhcCcCCCEEEECCCCceeEEE----ecce
Confidence 9999999999999999997 889999999999999863 58888874211100000 01000 0000 0000
Q ss_pred CchhhhhhhccCC-----C-CccceeeEeeccCCccccccCcc--------------cceEEeeeec---------eEEE
Q 017774 141 DIAEESLLQLKYD-----P-ASVWGYIEVHIEQGPVLEWVGFP--------------LGVVQGIAGQ---------TRLK 191 (366)
Q Consensus 141 ~~~~~~~~~~~~~-----~-~~~~a~~~~~~e~~~~~~~~~~~--------------~~~~~~~~g~---------~~~~ 191 (366)
. .+. + .....++.+|.....++-+.... ...+.+++|. .|++
T Consensus 188 -------~--~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~ 258 (466)
T TIGR01886 188 -------F--TLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEALKAAYESFLADKASLDGSFEINDESAT 258 (466)
T ss_pred -------E--EEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHHHHHHHHHHhhccCceEEEEEeCCEEE
Confidence 0 000 0 00000000111000000000000 0001123443 3899
Q ss_pred EEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHH----------HHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEe
Q 017774 192 VTVRGSQGHAGTVPMSMRQDPMTAAAELIVLL----------ERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISS 261 (366)
Q Consensus 192 v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g 261 (366)
|+++|+++|+|. | +.|.|||..|+++|..+ +.+.... ..-.+.+.......++..+++++|++.|++
T Consensus 259 i~v~G~~aH~s~-P-~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~g~~S~nvgvI~g 335 (466)
T TIGR01886 259 IVLIGKGAHGAA-P-QVGINSATFLALFLNQYAFAGGAKNFIHFLAEVE-HEDFYGEKLGIAFHDELMGDLAMNAGMFDF 335 (466)
T ss_pred EEEEeeEcccCC-C-CCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhc-CCCCCcccCCCcccccCcCceEEEeEEEEE
Confidence 999999999999 8 89999999999998873 2221100 000000000000001223578999999999
Q ss_pred cCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEe--e------ehHHHHHHHHHHhhcc-CC
Q 017774 262 WPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVER--K------LKSASYAALKRMTGAT-QH 332 (366)
Q Consensus 262 ~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~--~------~~~~l~~~~~~~~g~~-~~ 332 (366)
|.. | ++|++.+|+|+.|+++.+++.++|++.++. .+++++.. . -.+++.+.+.+++.+. +.
T Consensus 336 -G~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~~i~~-----~~~v~~~~~~~~P~~~~~ds~lv~~l~~a~~~v~G~ 405 (466)
T TIGR01886 336 -DHA-N---KESKLLLNFRYPQGTSPETMQKQVLDKFGG-----IVDVTYNGHFEEPHYVPGSDPLVQTLLKVYEKHTGK 405 (466)
T ss_pred -ecC-C---ceEEEEEEEecCCCCCHHHHHHHHHHHHhc-----ccEEEEecccCCCcccCCCCHHHHHHHHHHHHHhCC
Confidence 654 4 899999999999999999999999888764 23444321 1 1234444444444331 22
Q ss_pred CCCCCCCchhhHHHHHhhhcCEEE
Q 017774 333 EIPVIMSGAGHDAMAMSHLTKVCS 356 (366)
Q Consensus 333 ~~~~~~~~ggtD~~~~~~~iP~~~ 356 (366)
+.....++|+||+++|...+|...
T Consensus 406 ~~~~~~~~ggTDa~~~~~~i~~gv 429 (466)
T TIGR01886 406 KGHEVIIGGGTYGRLLERGVAYGA 429 (466)
T ss_pred CCceeeecCccHHHhccccccccc
Confidence 333335779999999986666544
No 57
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=99.97 E-value=1e-29 Score=250.67 Aligned_cols=233 Identities=19% Similarity=0.211 Sum_probs=165.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCC--CCCCeEEEecccCccccCCC-------------------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDAGI------------------- 59 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~--~~~~~i~l~~H~D~Vp~gg~------------------- 59 (366)
.|++|.++++||.++|+++|+++++++.+|++++++|.. ++.|+|+|.|||||||+++.
T Consensus 19 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~ 98 (477)
T TIGR01893 19 PSKNEKEVSNFIVNWAKKLGLEVKQDEVGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDW 98 (477)
T ss_pred CCccHHHHHHHHHHHHHHcCCeEEEeCCCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCE
Confidence 368899999999999999999999998999999997642 23589999999999997642
Q ss_pred ---------CCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccc-cccccccCCCCC
Q 017774 60 ---------FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP-VSALRVSDKSGV 129 (366)
Q Consensus 60 ---------~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~-~~~~~~~d~~g~ 129 (366)
.|||+|++++|++++. .+ .++++|.++|++|||.+ +.|++.+..... .+.....|.
T Consensus 99 i~GrG~~lg~D~k~gva~~l~~~~~---~~---~~~~~i~~~~~~dEE~g-----~~Gs~~l~~~~~~~~~~~~~d~--- 164 (477)
T TIGR01893 99 LKARGTTLGADNGIGVAMGLAILED---NN---LKHPPLELLFTVDEETG-----MDGALGLDENWLSGKILINIDS--- 164 (477)
T ss_pred EEECCccccccccHHHHHHHHHHhc---CC---CCCCCEEEEEEeccccC-----chhhhhcChhhcCCcEEEEecC---
Confidence 2999999988887654 33 45679999999999986 369998863111 111000110
Q ss_pred cHHHHHHHCCCCchhhhhhhccCCCC-ccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEe-CCCCCCCCCCC
Q 017774 130 TVLDALRENSIDIAEESLLQLKYDPA-SVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG-SQGHAGTVPMS 207 (366)
Q Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G-~~~Has~~p~~ 207 (366)
...+...+. .... .+.+++++|++ ..++|..+++|+++| +++|+|..| +
T Consensus 165 ----------~~~~~~~~g---~~~~~~~~~~~e~~~e---------------~~~kG~~~~~i~~~G~~~~Hsg~~p-~ 215 (477)
T TIGR01893 165 ----------EEEGEFIVG---CAGGRNVDITFPVKYE---------------KFTKNEEGYQISLKGLKGGHSGADI-H 215 (477)
T ss_pred ----------CCCCeEEEE---CCCCeeEEEEEEEEEE---------------ecCCCceEEEEEEeCcCCCcCcccc-C
Confidence 000000000 0000 01111112211 015799999999999 999998878 5
Q ss_pred CC-CCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHH
Q 017774 208 MR-QDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAG 286 (366)
Q Consensus 208 ~g-~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~ 286 (366)
.+ .||+..++++|.+++... .++++.|.| |...|+||++|++++|+|..+...
T Consensus 216 ~~r~nAi~~aa~~i~~l~~~~-------------------------~~~v~~~~g-g~~~N~ip~~~~~~~diR~~~~~~ 269 (477)
T TIGR01893 216 KGRANANKLMARVLNELKENL-------------------------NFRLSDIKG-GSKRNAIPREAKALIAIDENDVKL 269 (477)
T ss_pred CCCcCHHHHHHHHHHhhhhcC-------------------------CeEEEEEeC-CCcccccCCceEEEEEEChhHHHH
Confidence 66 699999999999887521 246788898 899999999999999999887777
Q ss_pred HHHHHHHHHHHHHHHH
Q 017774 287 RETVLYELSNQLYQIC 302 (366)
Q Consensus 287 ~~~~~~~i~~~~~~~~ 302 (366)
.+.+.+.+.+.+++++
T Consensus 270 l~~~~~~~~~~~~~~~ 285 (477)
T TIGR01893 270 LENLVKNFQSKFKSEY 285 (477)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7777776666655444
No 58
>PRK07205 hypothetical protein; Provisional
Probab=99.97 E-value=2e-28 Score=239.82 Aligned_cols=296 Identities=19% Similarity=0.143 Sum_probs=177.8
Q ss_pred HHHHHHHHHHHHHcCCEEEEcCcCC-EEEEecCCCCCCCeEEEecccCccccC----------------------CCCCC
Q 017774 6 VRAGNLIRQWMEDAGLRTWVDHLGN-VHGRVEGLNASAQALLIGSHLDTVVDA----------------------GIFDG 62 (366)
Q Consensus 6 ~~~~~~l~~~l~~~G~~~~~~~~gn-via~~~g~~~~~~~i~l~~H~D~Vp~g----------------------g~~D~ 62 (366)
.++++|+.++|+++||+++++..++ +++++ |. +.|+|+|+||+||||++ |+.||
T Consensus 41 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~-g~--~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~Dm 117 (444)
T PRK07205 41 QDVLEATLDLCQGLGFKTYLDPKGYYGYAEI-GQ--GEELLAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDD 117 (444)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCeEEEEEe-cC--CCcEEEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccC
Confidence 5688999999999999987765443 56665 43 24899999999999873 67899
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccc-cCC-CCCcHHHHHHHCCC
Q 017774 63 SLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRV-SDK-SGVTVLDALRENSI 140 (366)
Q Consensus 63 k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~-~d~-~g~~~~~~~~~~g~ 140 (366)
|++++++|.|+++|++.+. +++++|.|+|++|||+++ .|++.+........... .|. ..+.+. +.|
T Consensus 118 Kgglaa~l~Al~~l~~~~~--~~~~~i~l~~~~dEE~g~-----~g~~~~~~~~~~~~~~~~~~~~~~v~~~----ekG- 185 (444)
T PRK07205 118 KGPSMAALYAVKALLDAGV--QFNKRIRFIFGTDEETLW-----RCMNRYNEVEEQATMGFAPDSSFPLTYA----EKG- 185 (444)
T ss_pred cHHHHHHHHHHHHHHHcCC--CCCCcEEEEEECCcccCc-----ccHHHHHhCCCCCCeeECCCCCCceEEE----Eec-
Confidence 9999999999999999987 889999999999999874 47777663111000000 000 000000 000
Q ss_pred CchhhhhhhccCCCCccceeeEeeccCCcc--------ccccCcccceEE-----------eeee----ceEEEEEEEeC
Q 017774 141 DIAEESLLQLKYDPASVWGYIEVHIEQGPV--------LEWVGFPLGVVQ-----------GIAG----QTRLKVTVRGS 197 (366)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~--------~~~~~~~~~~~~-----------~~~g----~~~~~v~v~G~ 197 (366)
...+.+..++... +..... ..... +.+| ..+++++++|+
T Consensus 186 -----------------~~~~~i~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~ 247 (444)
T PRK07205 186 -----------------LLQAKLVGPGSDQLELEVGQAFNVVPA-KASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGK 247 (444)
T ss_pred -----------------eEEEEEEeCCccceEEecCCcccccCc-eeEEEecCHHHHHHHHHhcCceEeecCcEEEEEeE
Confidence 0000111111100 000000 00000 0122 13459999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHhc-----CCCCCcccCCC-CCCcccccCCCCcEEEEEEEEecCCCcceeCC
Q 017774 198 QGHAGTVPMSMRQDPMTAAAELIVLLERLCK-----HPKDFLSYDGR-SNCSTLESLSSSLVCTVGEISSWPSASNVIPG 271 (366)
Q Consensus 198 ~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~ 271 (366)
++|+|. | +.|.|||..+++++..++.... +.......... ..+.. ....+.+++|++. .|+||+
T Consensus 248 ~~Hss~-p-~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~nvg~-------~nvvP~ 317 (444)
T PRK07205 248 SVHAKD-A-PQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIE-DEPSGKLSFNIAG-------LTITKE 317 (444)
T ss_pred EcccCC-C-ccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCcccc-CCCcCCceEEeEE-------EEEECC
Confidence 999998 7 7999999999999988864310 00000000000 00000 0111356777654 478999
Q ss_pred eEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-------ehHHHHHHHHHHhhc-cCCCCCCCCCchhh
Q 017774 272 EVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------LKSASYAALKRMTGA-TQHEIPVIMSGAGH 343 (366)
Q Consensus 272 ~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-------~~~~l~~~~~~~~g~-~~~~~~~~~~~ggt 343 (366)
+|++++|+|+.|+++.+++.+.|++++++ .+++++.... ...++.+.+++++.+ .+.......++|++
T Consensus 318 ~a~~~ld~R~~p~~~~e~v~~~i~~~~~~----~~v~~~~~~~~~p~~~~~~~~lv~~l~~~~~~~~g~~~~~~~~gg~~ 393 (444)
T PRK07205 318 KSEIRIDIRIPVLADKEKLVQQLSQKAQE----YGLTYEEFDYLAPLYVPLDSELVSTLMSVYQEKTGDDSPAQSSGGAT 393 (444)
T ss_pred EEEEEEEEeCCCCCCHHHHHHHHHHHHHH----cCcEEEEecCCCceeeCCCcHHHHHHHHHHHHHhCCCCceEEeccHH
Confidence 99999999999999999999999887653 3555432211 234444555444433 23333444566777
Q ss_pred HHHHH
Q 017774 344 DAMAM 348 (366)
Q Consensus 344 D~~~~ 348 (366)
|+.++
T Consensus 394 ~~~~~ 398 (444)
T PRK07205 394 FARTM 398 (444)
T ss_pred HHHhC
Confidence 76543
No 59
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=99.97 E-value=1.7e-28 Score=240.67 Aligned_cols=221 Identities=19% Similarity=0.267 Sum_probs=163.5
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCC--CCCCeEEEecccCccccC---------------------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLN--ASAQALLIGSHLDTVVDA--------------------- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~--~~~~~i~l~~H~D~Vp~g--------------------- 57 (366)
.|++|.++++||.++++++|+++++++.+|++++++++. .+.|+|+|.|||||||++
T Consensus 25 ~S~~e~~~~~~l~~~~~~~G~~~~~d~~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~ 104 (485)
T PRK15026 25 PSYHEEQLAEYIVGWAKEKGFHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEW 104 (485)
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEEecCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCE
Confidence 477899999999999999999999998999999876431 235899999999999863
Q ss_pred ----CC---CCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCc
Q 017774 58 ----GI---FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVT 130 (366)
Q Consensus 58 ----g~---~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~ 130 (366)
|. .|||+|++++|+++ ++.++ ++++|.++|++|||.+ +.|++.+.....
T Consensus 105 l~g~Gt~lgaD~k~gva~~l~~l---~~~~~---~~~~i~~l~t~dEE~G-----~~ga~~l~~~~~------------- 160 (485)
T PRK15026 105 VKARGTTLGADNGIGMASALAVL---ADENV---VHGPLEVLLTMTEEAG-----MDGAFGLQSNWL------------- 160 (485)
T ss_pred EEeCCccccCccHHHHHHHHHHH---HhCCC---CCCCEEEEEEcccccC-----cHhHHHhhhccC-------------
Confidence 33 49999999887765 55553 4789999999999986 368887642100
Q ss_pred HHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCcc----cccc-Ccc--cceEEee----eeceEEEEEEEe-CC
Q 017774 131 VLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPV----LEWV-GFP--LGVVQGI----AGQTRLKVTVRG-SQ 198 (366)
Q Consensus 131 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~----~~~~-~~~--~~~~~~~----~g~~~~~v~v~G-~~ 198 (366)
.++.+ +..|+... .... +.. ....... +|..+++|+++| ++
T Consensus 161 ----------------------~~~~~-----i~~e~~~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~g 213 (485)
T PRK15026 161 ----------------------QADIL-----INTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKG 213 (485)
T ss_pred ----------------------CcCEE-----EEeCCCCCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCC
Confidence 01111 22232100 0000 000 0001112 688899999999 99
Q ss_pred CCCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCCcceeCCeEEEEE
Q 017774 199 GHAGTVPMSMRQ-DPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSASNVIPGEVTFTV 277 (366)
Q Consensus 199 ~Has~~p~~~g~-NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~~NvIP~~~~~~~ 277 (366)
+||+..| +.|+ |||..++++|..+. . .++++++.|+| |++.|+||++|++.+
T Consensus 214 gHsG~~i-~~g~~nAi~~la~~l~~~~---~----------------------~~~~~v~~i~G-G~~~NaIp~~a~a~i 266 (485)
T PRK15026 214 GHSGGEI-HVGLGNANKLLVRFLAGHA---E----------------------ELDLRLIDFNG-GTLRNAIPREAFATI 266 (485)
T ss_pred cCChHHH-CCCCccHHHHHHHHHHHhH---h----------------------hCCeEEEEEeC-CCccCCCCCCcEEEE
Confidence 9999778 8898 99999999999843 1 25679999999 999999999999999
Q ss_pred EeeCCChHHHHHHHHHHHHHHH
Q 017774 278 DLRAIDDAGRETVLYELSNQLY 299 (366)
Q Consensus 278 diR~~~~~~~~~~~~~i~~~~~ 299 (366)
++|....+..+.+.+.+.+.++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~ 288 (485)
T PRK15026 267 AVAADKVDALKSLVNTYQEILK 288 (485)
T ss_pred EEChhHHHHHHHHHHHHHHHHH
Confidence 9998887777777776666554
No 60
>PRK06156 hypothetical protein; Provisional
Probab=99.97 E-value=4e-28 Score=241.37 Aligned_cols=325 Identities=18% Similarity=0.172 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHcCCEEEEcCcCCEE--EEecCCCCCCCeEEEecccCccccC--------------------------
Q 017774 6 VRAGNLIRQWMEDAGLRTWVDHLGNVH--GRVEGLNASAQALLIGSHLDTVVDA-------------------------- 57 (366)
Q Consensus 6 ~~~~~~l~~~l~~~G~~~~~~~~gnvi--a~~~g~~~~~~~i~l~~H~D~Vp~g-------------------------- 57 (366)
.++++||.++|+++|++++. .+|++ ++++|.+ .|+|+|+|||||||++
T Consensus 75 ~~~~~~l~~~l~~~G~~~~~--~~~~v~~~~~~g~~--~~~l~l~gH~DvVp~~~~~W~~~~~~~~Pf~~~~~~g~lyGR 150 (520)
T PRK06156 75 IGFKKLLKSLARDFGLDYRN--VDNRVLEIGLGGSG--SDKVGILTHADVVPANPELWVLDGTRLDPFKVTLVGDRLYGR 150 (520)
T ss_pred HHHHHHHHHHHHHCCCeEEe--cCCeEEEEEecCCC--CCeEEEEEecCccCCCCccCccCCccCCCCceEEECCEEEEc
Confidence 35789999999999998753 46754 6776543 4899999999999852
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccc-cCCCC-CcHHHHH
Q 017774 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRV-SDKSG-VTVLDAL 135 (366)
Q Consensus 58 g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~-~d~~g-~~~~~~~ 135 (366)
|+.|||++++++|+|++.|++.+. +++++|.|+|++|||.++ .|++.++.......+.. .|... +...
T Consensus 151 G~~D~Kgg~a~~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~G~~~~~~~~~~~~~~~~~D~~~~~~~~--- 220 (520)
T PRK06156 151 GTEDDKGAIVTALYAMKAIKDSGL--PLARRIELLVYTTEETDG-----DPLKYYLERYTPPDYNITLDAEYPVVTA--- 220 (520)
T ss_pred CcccchHHHHHHHHHHHHHHHcCC--CCCceEEEEEecccccCc-----hhHHHHHHhcCCCCeEEeeCCCCceEEE---
Confidence 567999999999999999999987 788999999999999874 58888763221111100 11100 0000
Q ss_pred HHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcc---------c------------ceEEeeeece------
Q 017774 136 RENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFP---------L------------GVVQGIAGQT------ 188 (366)
Q Consensus 136 ~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~---------~------------~~~~~~~g~~------ 188 (366)
+.|...- ....+.......-.-+ ..+.+|......... . ....+++|..
T Consensus 221 -E~~~~~~-~i~~~~~~~~~~~~~l--~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 296 (520)
T PRK06156 221 -EKGWGTI-MATFPKRAADGKGAEI--VAMTGGAFANQIPQTAVATLSGGDPAALAAALQAAAAAQVKRHGGGFSIDFKR 296 (520)
T ss_pred -ecceEEE-EEEecCcCCCCCceeE--EEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHHHHHHHHhhcccCceEEEEE
Confidence 0000000 0000000000000000 011111110000000 0 0011122333
Q ss_pred ---EEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCC-----CCcc-------cCCCCCCcccccCCCCcE
Q 017774 189 ---RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPK-----DFLS-------YDGRSNCSTLESLSSSLV 253 (366)
Q Consensus 189 ---~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~-----~~~~-------~~~~~~~~~~~~~~~~~~ 253 (366)
|++|+++|+++|+|. | +.|.|||..+++++..|+++..... .++. +.....-...++..+..+
T Consensus 297 ~~~~~~I~v~Gk~aHsS~-P-~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~g~~~~~~~~g~~t 374 (520)
T PRK06156 297 DGKDVTITVTGKSAHSST-P-ESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKFGVAYKDDFMGPLT 374 (520)
T ss_pred cCCeEEEEEEeEECCCCC-C-CCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcCCccccCCCccCcE
Confidence 899999999999998 8 8999999999999999875211000 0000 000000000012224568
Q ss_pred EEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----e---hHHHHHHHHH
Q 017774 254 CTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-----L---KSASYAALKR 325 (366)
Q Consensus 254 ~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-----~---~~~l~~~~~~ 325 (366)
++++.|++ |. +.|++++|+|+.|+++.+++.++|++.++.++..+++++++... . ..++.+.+++
T Consensus 375 ~~~~~I~g-g~------~~~~l~iDiR~~p~~~~eev~~~I~~~i~~~~~~~gv~ve~~~~~~~p~~~~~d~~lv~~l~~ 447 (520)
T PRK06156 375 LSPTVVGQ-DD------KGTEVTVNLRRPVGKTPELLKGEIADALAAWQAKHQVALDIDYYWGEPMVRDPKGPWLKTLLD 447 (520)
T ss_pred EeeeEEEE-eC------CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHhhcCceEEEeecCCCceeeCCCCHHHHHHHH
Confidence 88999998 43 68999999999999999999999999998876667777766432 1 2345555555
Q ss_pred Hhhc-cCCCCCCCCCchhhHHHHHhhhcCEEEEEEee
Q 017774 326 MTGA-TQHEIPVIMSGAGHDAMAMSHLTKVCSLLCRL 361 (366)
Q Consensus 326 ~~g~-~~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g~ 361 (366)
++.+ .+.++....++|+||+++|. .++.|.|+
T Consensus 448 a~~~~~G~~~~~~~~~ggTDa~~~~----~~v~fGP~ 480 (520)
T PRK06156 448 VFGHFTGLDAKPVAIAGSTNAKLFP----NAVSFGPA 480 (520)
T ss_pred HHHHHhCCCCceeeecChhhhhhCC----ccEEEcCC
Confidence 5543 24444445678999998874 36777764
No 61
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=99.96 E-value=4.6e-27 Score=229.29 Aligned_cols=308 Identities=20% Similarity=0.149 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccccC--------------------CCCCCH
Q 017774 4 ASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVDA--------------------GIFDGS 63 (366)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g--------------------g~~D~k 63 (366)
++.++++|+.++|+++|++++. .+|+.++..... +.|+|+|+|||||||.+ |+.|||
T Consensus 32 ~~~~~~~~l~~~~~~~g~~~~~--~~~~~~~~~~~~-~~~~l~l~gH~D~Vp~~~~W~~~Pf~~~~~~g~lyGRGa~D~K 108 (447)
T TIGR01887 32 GPKKALDKFLELAKRDGFTTEN--VDNYAGYAEYGQ-GEEYLGILGHLDVVPAGDGWTSPPFEAEIKDGRIYGRGTLDDK 108 (447)
T ss_pred hHHHHHHHHHHHHHHcCceEEE--ecCceEEEEeCC-CCCeEEEEeecCCCCCCCCCcCCCCceEEECCEEEECCcccCc
Confidence 4689999999999999999863 456544432211 24899999999999863 677999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccc-cCCCC-CcHHHHHHHCCCC
Q 017774 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRV-SDKSG-VTVLDALRENSID 141 (366)
Q Consensus 64 ~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~-~d~~g-~~~~~~~~~~g~~ 141 (366)
+++++++.|++.|++.+. +++++|.|+|++|||.++ .|++.++.......+.. .|.+. +.+. +.|
T Consensus 109 G~laa~l~a~~~l~~~~~--~~~~~i~~~~~~dEE~g~-----~g~~~~l~~~~~~~~~~~~d~~~~~~~~----e~g-- 175 (447)
T TIGR01887 109 GPTIAALYAMKILKELGL--KLKKKIRFIFGTDEETGW-----ACIDYYFEHEEAPDIGFTPDAEFPIIYG----EKG-- 175 (447)
T ss_pred HHHHHHHHHHHHHHHcCC--CCCCcEEEEEECCcccCc-----HhHHHHHHhcCCCCEEEeCCCCcceEEE----ecC--
Confidence 999999999999999987 889999999999999863 58887763211000000 01000 0000 000
Q ss_pred chhhhhhhccCCCCccceeeEee-------------ccCCccccccCcccceEEeee-------------------ece-
Q 017774 142 IAEESLLQLKYDPASVWGYIEVH-------------IEQGPVLEWVGFPLGVVQGIA-------------------GQT- 188 (366)
Q Consensus 142 ~~~~~~~~~~~~~~~~~a~~~~~-------------~e~~~~~~~~~~~~~~~~~~~-------------------g~~- 188 (366)
...+.+. +..|.+......+.-.+.+.+ |..
T Consensus 176 ----------------~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~~~ 239 (447)
T TIGR01887 176 ----------------IVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGSFE 239 (447)
T ss_pred ----------------eEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceEEE
Confidence 0001111 111111110000000122233 555
Q ss_pred ----EEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHH--HHhcCCCCCc-------ccCCCCCCcccccCCCCcEEE
Q 017774 189 ----RLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLE--RLCKHPKDFL-------SYDGRSNCSTLESLSSSLVCT 255 (366)
Q Consensus 189 ----~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 255 (366)
|++|+++|+++|+|. | ++|.|||..+++++..++ +...+..+.+ .+.........++..+.+++|
T Consensus 240 ~~~~~~~i~v~G~~aHss~-p-~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~n 317 (447)
T TIGR01887 240 VNDGTATITLEGKSAHGSA-P-EKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMN 317 (447)
T ss_pred ecCCEEEEEEEeeecccCC-C-ccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEE
Confidence 899999999999999 8 899999999999999986 2211100000 000000000001222467999
Q ss_pred EEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEe-e------ehHHHHHHHHHHhh
Q 017774 256 VGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVER-K------LKSASYAALKRMTG 328 (366)
Q Consensus 256 ~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~-~------~~~~l~~~~~~~~g 328 (366)
++.|++ + +|+.|++++|+|+.|+++.+++.+++.+.+. . ........ . -..++.+++.+++.
T Consensus 318 vg~I~~-g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~~~~~----~-~~~~~~~~~~~p~~~~~~~~lv~~l~~~~~ 386 (447)
T TIGR01887 318 VGVIDY-E-----NAEAGLIGLNVRYPVGNDPDTMLKNELAKES----G-IVEVTENGYLKPLYVPKDDPLVQTLMKVYE 386 (447)
T ss_pred EEEEEE-e-----CCcEEEEEEEEecCCCCCHHHHHHHHHHHhh----C-cEEEEEccCCCCeEECCCCHHHHHHHHHHH
Confidence 999998 5 4999999999999999999987777664322 1 11111110 0 12445555555544
Q ss_pred cc-CCCCCCCCCchhhHHHHHhhhcCEEEEEEe
Q 017774 329 AT-QHEIPVIMSGAGHDAMAMSHLTKVCSLLCR 360 (366)
Q Consensus 329 ~~-~~~~~~~~~~ggtD~~~~~~~iP~~~~~~g 360 (366)
+. +.++......|+||++++ |.++.|.|
T Consensus 387 ~~~g~~~~~~~~~ggtda~~~----~~~i~~Gp 415 (447)
T TIGR01887 387 KQTGDEGTPVAIGGGTYARLM----ENGVAFGA 415 (447)
T ss_pred HHhCCCCCeeEecchhhhhhC----CCcEEeCC
Confidence 32 333333446788988775 33555654
No 62
>PRK08554 peptidase; Reviewed
Probab=99.95 E-value=3.8e-26 Score=222.47 Aligned_cols=285 Identities=17% Similarity=0.136 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHHHcCCEEEEc---CcCCEEEEecCCCCCCCeEEEecccCccccC---------------------CC
Q 017774 4 ASVRAGNLIRQWMEDAGLRTWVD---HLGNVHGRVEGLNASAQALLIGSHLDTVVDA---------------------GI 59 (366)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~~~~~~---~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~g---------------------g~ 59 (366)
.|.++++|+.++|+++|++++.. ...|+++.+ +. +.++|+|+|||||||++ |+
T Consensus 25 ~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~-~~--~~~~l~l~gH~DtVp~~~~~w~~~Pf~~~~~~g~lyGrG~ 101 (438)
T PRK08554 25 PSKECPKFIKDTLESWGIESELIEKDGYYAVYGEI-GE--GKPKLLFMAHFDVVPVNPEEWNTEPFKLTVKGDKAYGRGS 101 (438)
T ss_pred hHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEe-CC--CCCEEEEEeccccCCCCccccccCCceeEEECCEEEECCc
Confidence 36889999999999999987643 235788887 33 24789999999999864 56
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCC
Q 017774 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENS 139 (366)
Q Consensus 60 ~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g 139 (366)
.|||++++++|+|+++|++. .++++|.|+|++|||+++ .++..+..++. +.+
T Consensus 102 ~DmKgg~aa~l~A~~~l~~~----~~~~~i~l~~~~dEE~g~-----~~~~~~~~~~~-------------------~~~ 153 (438)
T PRK08554 102 ADDKGNVASVMLALKELSKE----PLNGKVIFAFTGDEEIGG-----AMAMHIAEKLR-------------------EEG 153 (438)
T ss_pred ccchHHHHHHHHHHHHHHhc----CCCCCEEEEEEcccccCc-----cccHHHHHHHH-------------------hcC
Confidence 79999999999999999875 467899999999999863 23445432111 001
Q ss_pred CCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeee----------------ec---eEEEEEEEeCC-C
Q 017774 140 IDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIA----------------GQ---TRLKVTVRGSQ-G 199 (366)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~----------------g~---~~~~v~v~G~~-~ 199 (366)
. .++. + +..||+. ... ++.+.+ |. .++.+++.|.+ +
T Consensus 154 ~------------~~~~--~---iv~Ept~------~~~-~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 209 (438)
T PRK08554 154 K------------LPKY--M---INADGIG------MKP-IIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETR 209 (438)
T ss_pred C------------CCCE--E---EEeCCCC------Ccc-hhhcCCceEEEEEecccccccccceeeeeeceeecccCcc
Confidence 1 1111 1 2334321 100 111112 22 35555566665 9
Q ss_pred CCCCCCCCCCCC--HHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCC-------------
Q 017774 200 HAGTVPMSMRQD--PMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPS------------- 264 (366)
Q Consensus 200 Has~~p~~~g~N--Ai~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~------------- 264 (366)
|++. | ..+.| ++..+++++.++....... .......+ ..| ...++++..... |.
T Consensus 210 Ha~~-~-~~g~~~~~i~~~~~~~~~~~~~~~~~----~g~~~~~~--~~~--~~~~~~~~~p~~-g~n~~~~~~~~~~~~ 278 (438)
T PRK08554 210 HAAY-F-LPGVDTHPLIAASHFLRESNVLAVSL----EGKFLKGN--VVP--GEVTLTYLEPGE-GEEVEVDLGLTRLLK 278 (438)
T ss_pred cccc-c-cCCcCchHHHHHHHHHhhcCceEEEE----eeeeeecC--ccc--ceeEEEEecCCC-CccccccccHHHHHH
Confidence 9997 4 34444 5777777776554321100 00000000 000 011222211111 11
Q ss_pred ----------------------Cccee---CCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-----
Q 017774 265 ----------------------ASNVI---PGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK----- 314 (366)
Q Consensus 265 ----------------------~~NvI---P~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~----- 314 (366)
..|++ |++|++++|+|+.+ .+.+++.++|++.+++.. .++++++...
T Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~~DiR~~~-~~~e~v~~~i~~~~~~~~--~~~~~~~~~~~~~~~ 355 (438)
T PRK08554 279 AIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLKLDIRAMS-YSKEDIERTLKEVLEFNL--PEAEVEIRTNEKAGY 355 (438)
T ss_pred HHHHHHHHhhccccccccceeeccceEEecCCeEEEEEEEEecC-CCHHHHHHHHHHHhhccC--CCceEEEEeccCCCC
Confidence 45666 89999999999988 578889999988775432 3444554422
Q ss_pred ----ehHHHHHHHHHHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEE
Q 017774 315 ----LKSASYAALKRMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSL 357 (366)
Q Consensus 315 ----~~~~l~~~~~~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~ 357 (366)
...++.+.+++++.+.+.++.....+|+||+++|+.. +|++.+
T Consensus 356 ~~~~~~~~lv~~~~~~~~~~g~~~~~~~~~GgtDa~~~~~~Gip~v~~ 403 (438)
T PRK08554 356 LFTPPDEEIVKVALRVLKELGEDAEPVEGPGASDSRYFTPYGVKAIDF 403 (438)
T ss_pred cCCCCChHHHHHHHHHHHHhCCCcEEEecCCchHHHHHHhcCCCceEE
Confidence 2466777777777666665565667899999999876 999873
No 63
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=99.82 E-value=2.7e-18 Score=156.87 Aligned_cols=277 Identities=18% Similarity=0.168 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEEcC------cCC--------EEEEecCCCCCCCeEEEecccCccccC-----------
Q 017774 3 PASVRAGNLIRQWMEDAGLRTWVDH------LGN--------VHGRVEGLNASAQALLIGSHLDTVVDA----------- 57 (366)
Q Consensus 3 ~~E~~~~~~l~~~l~~~G~~~~~~~------~gn--------via~~~g~~~~~~~i~l~~H~D~Vp~g----------- 57 (366)
.+-.++++|++++|++.|-.++... ..+ +.+++ |.+|++++++++|||||+|++
T Consensus 39 ~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvvl~~~-Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~ 117 (473)
T KOG2276|consen 39 LEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVVLGVL-GSDPSKKTVLVYGHLDVQPANLEDGWNTDPFT 117 (473)
T ss_pred HHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhhhhcc-cCCCCcceEEEEeeeeeeecCCCCCCcCCCeE
Confidence 3557899999999999997665321 112 44444 788899999999999999974
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccccccccccCC
Q 017774 58 -----------GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILPVSALRVSDK 126 (366)
Q Consensus 58 -----------g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~ 126 (366)
|+.|+|+++++-+.+++++++.|+ .++.+|+++|..-||+++ .|-..++.......+.
T Consensus 118 Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~--~lpvnv~f~~EgmEEsgS-----~~L~~l~~~~kD~~~~---- 186 (473)
T KOG2276|consen 118 LTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGI--DLPVNVVFVFEGMEESGS-----EGLDELIEKEKDKFFK---- 186 (473)
T ss_pred EEEECCEEeccCcCCCCccchHHHHHHHHHHHhCc--cccceEEEEEEechhccC-----ccHHHHHHHHhhhhhc----
Confidence 788999999999999999999998 999999999999999864 3444443211000000
Q ss_pred CCCcHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeeeeceEEEEEEEe--CCCCCCCC
Q 017774 127 SGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIAGQTRLKVTVRG--SQGHAGTV 204 (366)
Q Consensus 127 ~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~v~v~G--~~~Has~~ 204 (366)
..|.++ +.. ..+-......+..|.+|...|.++|+| +-.||+.+
T Consensus 187 --------------------------~vD~vc----iSd----nyWlg~kkPcltyGlRG~~yf~i~v~g~~~DlHSGvf 232 (473)
T KOG2276|consen 187 --------------------------DVDFVC----ISD----NYWLGTKKPCLTYGLRGVIYFQIEVEGPSKDLHSGVF 232 (473)
T ss_pred --------------------------cCCEEE----eeC----ceeccCCCcccccccccceeEEEEEeecccccccccc
Confidence 012111 111 111123334566789999999999999 78899974
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcC-----CCC---CcccCC--CCCC-------------cc-----------cccCCC
Q 017774 205 PMSMRQDPMTAAAELIVLLERLCKH-----PKD---FLSYDG--RSNC-------------ST-----------LESLSS 250 (366)
Q Consensus 205 p~~~g~NAi~~~a~~i~~l~~~~~~-----~~~---~~~~~~--~~~~-------------~~-----------~~~~~~ 250 (366)
- ...+-|+..+..++..|.....+ ..+ .+..++ .|.. .. ++-. .
T Consensus 233 G-G~~hE~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rW-r 310 (473)
T KOG2276|consen 233 G-GVVHEAMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRW-R 310 (473)
T ss_pred c-chhHHHHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhc-c
Confidence 4 45567777777777777543222 110 000000 0000 00 0001 1
Q ss_pred CcEEEEEEEE----ecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhC--ceEEEEee---------e
Q 017774 251 SLVCTVGEIS----SWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS--VSCIVERK---------L 315 (366)
Q Consensus 251 ~~~~~~~~I~----g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~v~~~---------~ 315 (366)
..++++..|+ + +++..|||.++...+.+|+.|.++.+.+.+.+.++++..=++.+ -++++... .
T Consensus 311 yPSLsihgIeGaFs~-pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~yl~~~f~~~nS~N~l~~~~~~~~~~Wv~d~ 389 (473)
T KOG2276|consen 311 YPSLSIHGIEGAFSG-PGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTRYLEKVFAELNSPNKLKVSMGHAGAPWVSDP 389 (473)
T ss_pred cCccceecccceeeC-CCceEEeehhheeeeEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCCceEEeecCCCCceecCC
Confidence 2234444444 4 68899999999999999999999999999999998877655543 34444443 2
Q ss_pred ----hHHHHHHHHHHhh
Q 017774 316 ----KSASYAALKRMTG 328 (366)
Q Consensus 316 ----~~~l~~~~~~~~g 328 (366)
...+.++++.++|
T Consensus 390 ~~~~y~a~krA~~~v~g 406 (473)
T KOG2276|consen 390 DDPHYLALKRAIETVYG 406 (473)
T ss_pred CchhHHHHHHHHHHhhC
Confidence 2455666666665
No 64
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.74 E-value=1.3e-17 Score=158.06 Aligned_cols=285 Identities=18% Similarity=0.104 Sum_probs=212.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcCcCC-------------EEEEecCCCCCCCeEEEecccCcccc------------
Q 017774 2 SPASVRAGNLIRQWMEDAGLRTWVDHLGN-------------VHGRVEGLNASAQALLIGSHLDTVVD------------ 56 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~~gn-------------via~~~g~~~~~~~i~l~~H~D~Vp~------------ 56 (366)
|..|.+++.++.+|++.+|+.+. ++.+| +.+.+++..+--|.+.|.+||||+|.
T Consensus 21 S~~e~~~~p~~~~~~k~~~~~v~-dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~ 99 (414)
T COG2195 21 SKHEKAVAPSTVGQAKLLGLLVE-DELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILK 99 (414)
T ss_pred CCCccccccccHHHHHHcCchhh-hhhccccccccccCCCCeeeEEeeccccccccccccccccccccccccccCCceee
Confidence 67889999999999999999884 33222 55556664333478889999999852
Q ss_pred ---C---------------------------------C----CCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEecc
Q 017774 57 ---A---------------------------------G----IFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSD 96 (366)
Q Consensus 57 ---g---------------------------------g----~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~d 96 (366)
| | +.|.|+|++..+.++.++++... ..+.++|.+.|+++
T Consensus 100 ~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~~-~i~h~~i~~g~s~~ 178 (414)
T COG2195 100 ATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKHP-EIPHGGIRGGFSPD 178 (414)
T ss_pred eccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcCc-cccccCeEEEecch
Confidence 1 1 13999999999999999997621 05789999999999
Q ss_pred ccCcccCCCCcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCc
Q 017774 97 EEGVRFQSTFLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGF 176 (366)
Q Consensus 97 EE~~~~~~~~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~ 176 (366)
||.++ .|++.+.- . .|..+ ++ ..+++ .
T Consensus 179 Ee~g~-----rg~~~~~~-----------------a------------------~f~a~--~a---y~iDG--------g 205 (414)
T COG2195 179 EEIGG-----RGAANKDV-----------------A------------------RFLAD--FA---YTLDG--------G 205 (414)
T ss_pred HHhhh-----hhhhhccH-----------------H------------------hhhcc--ee---EecCC--------C
Confidence 99873 47776530 0 11111 11 12221 1
Q ss_pred ccc-eEEeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEE
Q 017774 177 PLG-VVQGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCT 255 (366)
Q Consensus 177 ~~~-~~~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (366)
..| +..-..+...+++++.|+..|++..+ ....||+..+++++..+..... | ..++.+
T Consensus 206 ~~g~i~~ea~~~~~~~~~~~g~~~h~~~a~-~~~i~a~~~a~e~~~~~~~~~~------------------~--e~t~~~ 264 (414)
T COG2195 206 PVGEIPREAFNAAAVRATIVGPNVHPGSAK-GKMINALLLAAEFILELPLEEV------------------P--ELTEGP 264 (414)
T ss_pred ccCeeeeeccchheeeeeeeccCcCccchH-HHHhhHHHhhhhhhhcCCcccc------------------c--cccccc
Confidence 222 33446788999999999999999877 7889999988888887653221 2 246677
Q ss_pred EEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhC--ceEEEEee---------ehHHHHHHHH
Q 017774 256 VGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRS--VSCIVERK---------LKSASYAALK 324 (366)
Q Consensus 256 ~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~v~~~---------~~~~l~~~~~ 324 (366)
.|.++. +...|.|.+++...+.+|.............+++.+++.+++++ ..++++.. -...+.+.++
T Consensus 265 ~Gv~~~-~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~Yp~~~~~~~~~iv~~a~ 343 (414)
T COG2195 265 EGVYHL-GDSTNSVEETSLNLAIIRDFDNLLFRARKDSMKDVVEEMAASLGKLAGAELEVKDSYPGWKIKPDSPLVDLAK 343 (414)
T ss_pred ceEEec-cccccchhhhhhhhhhhhhcchhHHHHhHHHHHHHHHHHHHHhhhccceEEEEeccccCcCCCCCchHHHHHH
Confidence 888888 89999999999999999999998888888888888888888777 44444333 2466778888
Q ss_pred HHhhccCCCCCCCCCchhhHHHHHhhh-cCEEEEEEe-eCC
Q 017774 325 RMTGATQHEIPVIMSGAGHDAMAMSHL-TKVCSLLCR-LNN 363 (366)
Q Consensus 325 ~~~g~~~~~~~~~~~~ggtD~~~~~~~-iP~~~~~~g-~~~ 363 (366)
+++.+++.++...++.||+|.+.++.. .|+..+|+| +.+
T Consensus 344 ~a~~~l~~~p~v~~i~gGtd~~~is~~g~p~~~i~~Gp~~n 384 (414)
T COG2195 344 KAYKELGIKPKVKPIHGGTDGGVLSFKGLPTPNISTGPGEN 384 (414)
T ss_pred HHHHHhCCCceEEEeecccchhhhhccCCCCceEecccccC
Confidence 888877766666778899999999877 999999998 655
No 65
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.73 E-value=4.8e-17 Score=128.46 Aligned_cols=110 Identities=28% Similarity=0.380 Sum_probs=93.3
Q ss_pred EeeeeceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEe
Q 017774 182 QGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISS 261 (366)
Q Consensus 182 ~~~~g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g 261 (366)
++++|..+++++++|+++|+|. | +.+.||+..++++|..|+....+... . .. ......++++++.|++
T Consensus 1 ~g~~G~~~~~i~~~G~~~H~s~-~-~~g~nai~~~~~~l~~l~~~~~~~~~--~--~~------~~~~~~~~~~~~~i~g 68 (111)
T PF07687_consen 1 IGHRGVIWFRITITGKSGHSSR-P-EKGVNAIEAAARFLNALEELEFEWAF--R--PE------EFFPGPPTLNIGSIEG 68 (111)
T ss_dssp EEEEEEEEEEEEEESBSEETTS-G-GGSBCHHHHHHHHHHHHHHTTCHBTS--T--HH------HCTCTSEEEEEEEEEE
T ss_pred CcCCCEEEEEEEEEeeccCCCC-c-cCccCHHHHHHHHHHHHHHhhccccc--c--cc------cccccccceeEeeccc
Confidence 3689999999999999999996 8 89999999999999999987432100 0 00 0112578999999999
Q ss_pred cCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHH
Q 017774 262 WPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEK 304 (366)
Q Consensus 262 ~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~ 304 (366)
|...|+||++|++++++|+.|.++.+++.+.|++.+++++.+
T Consensus 69 -G~~~n~ip~~a~~~~~~R~~p~~~~~~i~~~i~~~~~~~~~~ 110 (111)
T PF07687_consen 69 -GTAPNVIPDEATLTVDIRYPPGEDLEEIKAEIEAAVEKIAKK 110 (111)
T ss_dssp -ESSTTEESSEEEEEEEEEESTCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcCCEECCEEEEEEEEECCCcchHHHHHHHHHHHHHHhhhC
Confidence 899999999999999999999999999999999999988765
No 66
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.63 E-value=3.9e-15 Score=137.55 Aligned_cols=242 Identities=19% Similarity=0.198 Sum_probs=158.2
Q ss_pred CHHHHHHHHHHHHHHHHcCC-E-----EE---E--c--CcCCEEEEecCCCCCCCeEEEecccCcccc------------
Q 017774 2 SPASVRAGNLIRQWMEDAGL-R-----TW---V--D--HLGNVHGRVEGLNASAQALLIGSHLDTVVD------------ 56 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~-~-----~~---~--~--~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~------------ 56 (366)
|..|...+++|...|.++-+ + ++ + | .+.||+|.++|.. ++++|++.||+|||..
T Consensus 26 T~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~-~k~tvvl~gH~DtV~iedYg~lKd~Afd 104 (553)
T COG4187 26 TPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGT-SKRTVVLHGHFDTVSIEDYGELKDLAFD 104 (553)
T ss_pred CcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCC-CCceEEEeeccceeecccccchhhhccC
Confidence 56788999999999998753 1 11 1 2 3569999999854 5799999999999932
Q ss_pred -------------------------------CCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCC
Q 017774 57 -------------------------------AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQST 105 (366)
Q Consensus 57 -------------------------------gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~ 105 (366)
.|+.|||+|+|++|++++.+.+.+ ..+++|.|+.++|||..+
T Consensus 105 p~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~~---~~~GNlLf~a~pdEE~~s---- 177 (553)
T COG4187 105 PLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAART---DRQGNLLFMAVPDEEVES---- 177 (553)
T ss_pred HHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhCC---CCCCcEEEEeccchhhhc----
Confidence 178899999999999999999875 789999999999999764
Q ss_pred CcchHHhhcccccccccccCCCCCcHHHHHHHCCCCchhhhhhhccCCCCccceeeEeeccCCccccccCcccceEEeee
Q 017774 106 FLGSAALAGILPVSALRVSDKSGVTVLDALRENSIDIAEESLLQLKYDPASVWGYIEVHIEQGPVLEWVGFPLGVVQGIA 185 (366)
Q Consensus 106 ~~Gs~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~~~~ 185 (366)
.|++.....++ .|.+ .+..+...+ ++.++..........-.++.|..
T Consensus 178 -~G~r~a~~~L~----------------~L~k-------------k~~l~~~~~---IN~D~~~~~~dGd~~ryvYtGti 224 (553)
T COG4187 178 -RGMREARPALP----------------GLKK-------------KFDLEYTAA---INLDVTSDQGDGDQGRYVYTGTI 224 (553)
T ss_pred -ccHHHHHHHHH----------------HHHH-------------hhCceEEEE---eccccccCCCCCccceEEEeccc
Confidence 57776653222 1111 111111111 33333333333333334778899
Q ss_pred eceEEEEEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCcccccCCCCcEEEEEEEEecCCC
Q 017774 186 GQTRLKVTVRGSQGHAGTVPMSMRQDPMTAAAELIVLLERLCKHPKDFLSYDGRSNCSTLESLSSSLVCTVGEISSWPSA 265 (366)
Q Consensus 186 g~~~~~v~v~G~~~Has~~p~~~g~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~g~g~~ 265 (366)
|..---.-|.|+..|+|. | -.|+||-..+++++..|+.-.. ..+. .+..+. | +++.+..-.++ ..
T Consensus 225 GKLLp~f~vvG~etHvG~-~-f~Gvnan~maSei~~~le~N~~-l~dr--~~Ge~t-----~--PPs~L~qkDlK---e~ 289 (553)
T COG4187 225 GKLLPFFFVVGCETHVGY-P-FEGVNANFMASEITRRLELNAD-LADR--VDGEIT-----P--PPSCLEQKDLK---ES 289 (553)
T ss_pred hhhcceeEEEeeccccCC-c-ccCCCHHHHHHHHHHHhhcChh-hhhh--hCCeeC-----C--CcHhhhhhhhh---hh
Confidence 999889999999999999 8 6899999999999999864211 0000 000010 0 12222221122 34
Q ss_pred cce-eCCeEEEEEEeeCCChHHHHHHHHHHHHHHHH
Q 017774 266 SNV-IPGEVTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (366)
Q Consensus 266 ~Nv-IP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~ 300 (366)
.|| .|..+.+.+++=+. ..+.+++.+++++.+++
T Consensus 290 Y~VqTp~~a~~~fN~l~h-~~ta~~~~d~l~~~a~~ 324 (553)
T COG4187 290 YNVQTPERAWLYFNWLYH-SRTAKELFDRLKEEAET 324 (553)
T ss_pred ccccCcchhhhhheehhh-cCCHHHHHHHHHHHHHH
Confidence 444 58889999998655 33445555555444433
No 67
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.57 E-value=2.5e-14 Score=132.61 Aligned_cols=102 Identities=26% Similarity=0.345 Sum_probs=86.8
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcC-------------------c-CCEEEEecCCCCCCCeEEEecccCcccc-----
Q 017774 2 SPASVRAGNLIRQWMEDAGLRTWVDH-------------------L-GNVHGRVEGLNASAQALLIGSHLDTVVD----- 56 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~-------------------~-gnvia~~~g~~~~~~~i~l~~H~D~Vp~----- 56 (366)
|++|.++++||.++|+++|++++... . .||++.++|.. .+.|+|.||+|||++
T Consensus 51 S~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~--~~~Ill~AH~DTV~p~~~~~ 128 (346)
T PRK10199 51 SPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKA--PQQIIIMAHLDTYAPQSDAD 128 (346)
T ss_pred CHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCC--CCeEEEEEEcCcCCCCCCCc
Confidence 78999999999999999999875311 1 35999998854 489999999999963
Q ss_pred ----------CCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhc
Q 017774 57 ----------AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (366)
Q Consensus 57 ----------gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~ 114 (366)
.|+.|||+|++++|++++.|++. +++++|.|+++++||.+ +.||+++++
T Consensus 129 ~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~----~~~~~I~fv~~~~EE~G-----l~GS~~~~~ 187 (346)
T PRK10199 129 VDANLGGLTLQGMDDNAAGLGVMLELAERLKNV----PTEYGIRFVATSGEEEG-----KLGAENLLK 187 (346)
T ss_pred cccCCCCcccCCccccHHHHHHHHHHHHHHhhC----CCCCcEEEEEECCcccC-----cHHHHHHHH
Confidence 27899999999999999999865 56789999999999987 479999874
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.28 E-value=2.5e-11 Score=114.08 Aligned_cols=98 Identities=19% Similarity=0.215 Sum_probs=85.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCcccc------------------------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD------------------------ 56 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~------------------------ 56 (366)
+|+.|.+++++|.++|+++|+++++|..||+++.++|.. +.++|+|.||||+|..
T Consensus 18 ~SG~E~~V~~~l~~~l~~~g~ev~~D~~Gnlia~~~g~~-~~~~v~l~aHmDevG~~V~~I~~~G~l~~~~iGG~~~~~l 96 (343)
T TIGR03106 18 PTGFTDAVVRYVAERLEDLGIEYELTRRGAIRATLPGRE-ATPARAVVTHLDTLGAMVRELKDNGRLELVPIGHWSARFA 96 (343)
T ss_pred CCCCHHHHHHHHHHHHHHcCCeEEECCCeEEEEEECCCC-CCCeEEEEEeeccccceeeEECCCCeEEEEecCCCcccce
Confidence 478999999999999999999999999999999987743 2479999999999821
Q ss_pred -----------C--------------------------------------------------------------------
Q 017774 57 -----------A-------------------------------------------------------------------- 57 (366)
Q Consensus 57 -----------g-------------------------------------------------------------------- 57 (366)
+
T Consensus 97 ~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd~v~~~~~~~~~~~~~ 176 (343)
T TIGR03106 97 EGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGDFVAFDPQPEFLANGF 176 (343)
T ss_pred eCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCCEEEECCccEEecCCE
Confidence 0
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcc
Q 017774 58 ---GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR 101 (366)
Q Consensus 58 ---g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~ 101 (366)
=++|||+|+++++.+++.|++.+. +++++|+++|+++||.++
T Consensus 177 i~gr~~D~K~G~a~~l~~~~~l~~~~~--~~~~~v~~~~t~qEEvG~ 221 (343)
T TIGR03106 177 IVSRHLDDKAGVAALLAALKAIVEHKV--PLPVDVHPLFTITEEVGS 221 (343)
T ss_pred EEEEecccHHhHHHHHHHHHHHHhcCC--CCCceEEEEEECCcccCc
Confidence 014999999999999999998875 789999999999999873
No 69
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.21 E-value=8.3e-11 Score=109.49 Aligned_cols=103 Identities=25% Similarity=0.329 Sum_probs=88.4
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCccc-------------------------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVV------------------------- 55 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp------------------------- 55 (366)
+|+.|.++.++++++|++++.++++|..||++++++|.. +.+.|++.+|||.|-
T Consensus 17 psG~E~eVr~~~~~el~~~~~ev~~D~lGnlia~~~g~~-g~~~imi~AHmDEiG~mV~~I~~~G~Lr~~~IGG~~~~~~ 95 (355)
T COG1363 17 PSGYEEEVRDVLKEELEPLGDEVEVDRLGNLIAKKGGKN-GPPKVMIAAHMDEIGFMVKEIEDDGFLRFVPIGGWDPQVL 95 (355)
T ss_pred CCCcHHHHHHHHHHHHHHhCCceEEcCCCcEEEEecCCC-CCccEEEEeecceeeeeEEEECCCceEEEEEcCCcChhhc
Confidence 589999999999999999999999999999999998833 446799999999981
Q ss_pred ------------------------cC------------------------------------------------------
Q 017774 56 ------------------------DA------------------------------------------------------ 57 (366)
Q Consensus 56 ------------------------~g------------------------------------------------------ 57 (366)
|-
T Consensus 96 ~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v~~~~~~~~l~~~~i~ 175 (355)
T COG1363 96 EGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFVVFDPRFRELANGRVV 175 (355)
T ss_pred cCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEEEEcCceEEecCCcEE
Confidence 00
Q ss_pred -CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhh
Q 017774 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (366)
Q Consensus 58 -g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~ 113 (366)
=++|++.|++++|.+++.| + +. .++.+++++|+..||.+ +.|++...
T Consensus 176 skalDdR~gva~lle~lk~l-~-~~--~~~~~vy~v~tvqEEVG-----lrGA~~~a 223 (355)
T COG1363 176 SKALDDRAGVAALLELLKEL-K-GI--ELPADVYFVASVQEEVG-----LRGAKTSA 223 (355)
T ss_pred eeeccchHhHHHHHHHHHHh-c-cC--CCCceEEEEEecchhhc-----cchhhccc
Confidence 1369999999999999999 4 44 88999999999999987 46888765
No 70
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.17 E-value=1.5e-10 Score=108.87 Aligned_cols=104 Identities=21% Similarity=0.221 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCcccc----------------C-------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A------- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~----------------g------- 57 (366)
+|+.|.++++++.++|++++.++++|+.||+++.++|...+.|+|+|.||||+|.. |
T Consensus 13 pSG~E~~v~~~i~~~l~~~~~~v~~D~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~~~~vGG~~~~~l 92 (350)
T TIGR03107 13 TSGFEHPIRDYLRQDITPLVDQVETDGLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFRVVELGGWNPLVV 92 (350)
T ss_pred CCCCcHHHHHHHHHHHHhhCCEEEECCCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEEEEeCCCcccccc
Confidence 58999999999999999999999999999999988664122479999999999820 0
Q ss_pred --------------------------------------------------------------------------------
Q 017774 58 -------------------------------------------------------------------------------- 57 (366)
Q Consensus 58 -------------------------------------------------------------------------------- 57 (366)
T Consensus 93 ~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~~~~~~~~~~~~i 172 (350)
T TIGR03107 93 SSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQTETILTANGKNV 172 (350)
T ss_pred CCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEECCCeEEEcCCCEE
Confidence
Q ss_pred --CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhh
Q 017774 58 --GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (366)
Q Consensus 58 --g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~ 113 (366)
-++|++.|+++++.+++.|++. +++.+|+++|++.||.+ ..|++...
T Consensus 173 ~~kalDdR~g~a~l~e~l~~l~~~----~~~~~l~~~~tvqEEvG-----~rGA~~aa 221 (350)
T TIGR03107 173 ISKAWDNRYGVLMILELLESLKDQ----ELPNTLIAGANVQEEVG-----LRGAHVST 221 (350)
T ss_pred EEeccccHHHHHHHHHHHHHhhhc----CCCceEEEEEEChhhcC-----chhhhhHH
Confidence 1359999999999999999876 56899999999999987 36888654
No 71
>PRK09961 exoaminopeptidase; Provisional
Probab=99.14 E-value=2.8e-10 Score=107.38 Aligned_cols=102 Identities=22% Similarity=0.273 Sum_probs=87.1
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCcccc----------------C-------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A------- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~----------------g------- 57 (366)
+|+.|.++++++.++|+++|+++++|+.||+++++.|. +.|+|+|.||||+|+. |
T Consensus 15 ~sG~E~~v~~~i~~~l~~~~~~v~~D~~Gnvi~~~~g~--~~~~v~l~aHmDevg~~V~~I~~~G~l~~~~vGG~~~~~~ 92 (344)
T PRK09961 15 IASSEQEVRQILLEEADRLQKEVRFDGLGSVLIRLNES--TGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAAR 92 (344)
T ss_pred CCCChHHHHHHHHHHHHhhCCEEEECCCCCEEEEEcCC--CCCEEEEEeccceeceEEEEECCCceEEEEeCCCcccccc
Confidence 48899999999999999999999999999999988663 2379999999999831 0
Q ss_pred ----------------------------------------------------------------------CCCCCHHHHH
Q 017774 58 ----------------------------------------------------------------------GIFDGSLGII 67 (366)
Q Consensus 58 ----------------------------------------------------------------------g~~D~k~gi~ 67 (366)
-++|++.|++
T Consensus 93 ~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~gkalDnR~g~~ 172 (344)
T PRK09961 93 QLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCY 172 (344)
T ss_pred CCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEEeechhhHhHH
Confidence 1249999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhh
Q 017774 68 TAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (366)
Q Consensus 68 ~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~ 113 (366)
+++.+++.+++. +++.+|+++|+..||.+ ..|++...
T Consensus 173 ~lle~l~~l~~~----~~~~~v~~~~tvqEEvG-----~rGa~~aa 209 (344)
T PRK09961 173 LLVTLLRELHDA----ELPAEVWLVASSSEEVG-----LRGGQTAT 209 (344)
T ss_pred HHHHHHHHhhhc----CCCceEEEEEEcccccc-----hHHHHHHH
Confidence 999999999865 56899999999999987 36887665
No 72
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.03 E-value=5.4e-10 Score=96.43 Aligned_cols=62 Identities=34% Similarity=0.375 Sum_probs=53.2
Q ss_pred EEecccCcccc--------------------CCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCC
Q 017774 46 LIGSHLDTVVD--------------------AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQST 105 (366)
Q Consensus 46 ~l~~H~D~Vp~--------------------gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~ 105 (366)
+|++||||||. .|+.|+|+++++++++++.|++.+. +++++|.|+|+++||.++
T Consensus 1 ll~~H~Dtv~~~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~--~~~~~i~~~~~~~EE~g~---- 74 (189)
T PF01546_consen 1 LLYAHMDTVPGPEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGD--DLPGNIIFLFTPDEEIGS---- 74 (189)
T ss_dssp EEEEES-BCSTGGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTT--TCSSEEEEEEESTCCGTS----
T ss_pred CccccccccCCcCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccc--cccccccccccccccCCC----
Confidence 68999999991 2777999999999999999998886 899999999999999985
Q ss_pred CcchHHhh
Q 017774 106 FLGSAALA 113 (366)
Q Consensus 106 ~~Gs~~~~ 113 (366)
..|++.++
T Consensus 75 ~~g~~~l~ 82 (189)
T PF01546_consen 75 IGGAKHLL 82 (189)
T ss_dssp TTHHHHHH
T ss_pred cchhhhhh
Confidence 22888776
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.00 E-value=2.8e-09 Score=100.25 Aligned_cols=99 Identities=17% Similarity=0.175 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEcCcCCEEEEecCCCCCCCeEEEecccCcccc----------------C-------
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVDHLGNVHGRVEGLNASAQALLIGSHLDTVVD----------------A------- 57 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~~~gnvia~~~g~~~~~~~i~l~~H~D~Vp~----------------g------- 57 (366)
+|+.|.++++++.++|+.++.++++|..||+++.. |. +.++|+|.||||.|.. |
T Consensus 15 ~SG~E~~v~~~l~~~l~~~~dev~~D~~GNli~~~-g~--~~~kvml~AHmDevG~mV~~I~~~G~l~~~~lGG~~~~~l 91 (356)
T PRK09864 15 VSGDEQEVRDILINTLEPCVNEITFDGLGSFVARK-GN--KGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSM 91 (356)
T ss_pred CCCchHHHHHHHHHHHHHhCCEEEECCCCCEEEEe-CC--CCcEEEEEecccccCEEEEEECCCCeEEEEeCCCcCcccc
Confidence 58999999999999999999999999999999986 52 2379999999999821 0
Q ss_pred --------------------------------------------------------------------------------
Q 017774 58 -------------------------------------------------------------------------------- 57 (366)
Q Consensus 58 -------------------------------------------------------------------------------- 57 (366)
T Consensus 92 ~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~~~~l~~~~i~~ 171 (356)
T PRK09864 92 LNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEANFACWGEDKVVG 171 (356)
T ss_pred CCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCCcEEEcCCEEEE
Confidence
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhh
Q 017774 58 GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (366)
Q Consensus 58 g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~ 113 (366)
-++|++.|+++++.+++.|++ ++.+|+++|+..||.+ ..|++...
T Consensus 172 kalDnR~g~~~lle~l~~l~~------~~~~vy~v~TvQEEvG-----lrGA~~aa 216 (356)
T PRK09864 172 KALDNRIGCAMMAELLQTVNN------PEITLYGVGSVEEEVG-----LRGAQTSA 216 (356)
T ss_pred EeCccHHHHHHHHHHHHHhhc------CCCeEEEEEEcchhcc-----hHHHHHHH
Confidence 124999999999999998853 5689999999999987 46888765
No 74
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.43 E-value=3.6e-07 Score=78.24 Aligned_cols=64 Identities=31% Similarity=0.487 Sum_probs=54.4
Q ss_pred eEEEecccCccc-------cCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhc
Q 017774 44 ALLIGSHLDTVV-------DAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAG 114 (366)
Q Consensus 44 ~i~l~~H~D~Vp-------~gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~ 114 (366)
.|++.||+|+++ ..|+.|+-.|++++|++++.|++.+. +++++|.|+|+.+||.+ +.||+.+++
T Consensus 2 ~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~~~~--~~~~~i~fv~~~~EE~g-----l~GS~~~~~ 72 (179)
T PF04389_consen 2 YIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKELKP--QPKRTIRFVFFDGEEQG-----LLGSRAFVE 72 (179)
T ss_dssp EEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHHSTH--SSSEEEEEEEESSGGGT-----SHHHHHHHH
T ss_pred EEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHHhhc--ccCccEEEEEecccccC-----ccchHHHHH
Confidence 689999999976 34889999999999999999999775 78899999999999987 589999984
No 75
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.33 E-value=2.3e-06 Score=86.88 Aligned_cols=107 Identities=26% Similarity=0.365 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHcCC-------EEEEc------------------CcCCEEEEecCC-CCCCCeEEEecccCccccC
Q 017774 4 ASVRAGNLIRQWMEDAGL-------RTWVD------------------HLGNVHGRVEGL-NASAQALLIGSHLDTVVDA 57 (366)
Q Consensus 4 ~E~~~~~~l~~~l~~~G~-------~~~~~------------------~~gnvia~~~g~-~~~~~~i~l~~H~D~Vp~g 57 (366)
.|..+.+++.+++.+..= +.++| +..|++.++.+. ..+.-.|++++|.|+||.+
T Consensus 79 ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~~k~~~~~~~lLlnaHfDSvpt~ 158 (834)
T KOG2194|consen 79 NEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKISPKNGNDKNALLLNAHFDSVPTG 158 (834)
T ss_pred hHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecCCCCCCccceeeeeccccccCCC
Confidence 455788888887776421 11211 123788888644 3334599999999999987
Q ss_pred -CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcccc
Q 017774 58 -GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGILP 117 (366)
Q Consensus 58 -g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~~~ 117 (366)
|+.|+-.+++++|++++.+..... .+.++|+++|..+||.. +.||..|+.+.+
T Consensus 159 ~gAtDDg~~va~mLe~lRv~s~~~~--~l~~~vVFLfNgaEE~~-----L~gsH~FItQH~ 212 (834)
T KOG2194|consen 159 PGATDDGSGVASMLEALRVLSKSDK--LLTHSVVFLFNGAEESG-----LLGSHAFITQHP 212 (834)
T ss_pred CCCCcchhHHHHHHHHHHHhhcCCC--cccccEEEEecCcccch-----hhhcccceecCh
Confidence 788999999999999999998865 67999999999999987 579999986544
No 76
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.16 E-value=2.9e-06 Score=78.18 Aligned_cols=45 Identities=24% Similarity=0.245 Sum_probs=38.8
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhh
Q 017774 60 FDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (366)
Q Consensus 60 ~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~ 113 (366)
+|++.|+++++.+++.|++.+ ++.+|+++|++.||.+ +.|++...
T Consensus 133 lDdR~g~~~lle~l~~l~~~~----~~~~v~~v~tvqEEvG-----~rGA~~aa 177 (292)
T PF05343_consen 133 LDDRAGCAVLLELLRELKEKE----LDVDVYFVFTVQEEVG-----LRGAKTAA 177 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTSS-----SSEEEEEEESSCTTT-----SHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHhhcC----CCceEEEEEEeeeeec-----Ccceeecc
Confidence 489999999999999999874 5699999999999987 46888765
No 77
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=97.36 E-value=0.00051 Score=67.33 Aligned_cols=65 Identities=34% Similarity=0.483 Sum_probs=58.2
Q ss_pred CCeEEEecccCccccC-CCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcc
Q 017774 42 AQALLIGSHLDTVVDA-GIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI 115 (366)
Q Consensus 42 ~~~i~l~~H~D~Vp~g-g~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~ 115 (366)
.+.+++.+|+|.+|.+ |+.|+-.|++++|+.++.|+.. .++++|.|++...||.+ +.||++++..
T Consensus 208 ~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~----~p~~~v~f~~~~aEE~G-----l~GS~~~~~~ 273 (435)
T COG2234 208 DSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGN----PPKRTVRFVAFGAEESG-----LLGSEAYVKR 273 (435)
T ss_pred CceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcC----CCCceEEEEEecchhhc-----ccccHHHHhc
Confidence 4889999999998874 8999999999999999999988 68999999999999987 5899998843
No 78
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=97.24 E-value=0.0016 Score=57.99 Aligned_cols=112 Identities=19% Similarity=0.283 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEcC-----------cCCEEEEecCCCCCCCeEEEecccCccc-cC----CCCCCHHH
Q 017774 2 SPASVRAGNLIRQWMEDAGLRTWVDH-----------LGNVHGRVEGLNASAQALLIGSHLDTVV-DA----GIFDGSLG 65 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~~-----------~gnvia~~~g~~~~~~~i~l~~H~D~Vp-~g----g~~D~k~g 65 (366)
|++-.++.+||.+.|+.+|+.++.+. ..|+++++.... ...+++.+|+|+-- ++ |+.|...+
T Consensus 68 s~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A--~r~lVlachydsk~~p~~~~vgatdsAvp 145 (338)
T KOG3946|consen 68 SPGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNA--SRYLVLACHYDSKIFPGGMFVGATDSAVP 145 (338)
T ss_pred CCccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCc--chheeeecccccccCCCcceEeecccccc
Confidence 56678899999999999999987542 247999986543 48999999999952 22 67798999
Q ss_pred HHHHHHHHHHHHhcCC--CCCCCCCEEEEEeccccCc---ccCCCCcchHHhhcc
Q 017774 66 IITAISALKVLKSTGK--LGKLKRPVEVIAFSDEEGV---RFQSTFLGSAALAGI 115 (366)
Q Consensus 66 i~~~l~a~~~l~~~~~--~~~~~~~v~~~~~~dEE~~---~~~~~~~Gs~~~~~~ 115 (366)
+++++..+++|...-. ..+.+-.+.++|-.+||.- +...|.+||++++++
T Consensus 146 camll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA~~ 200 (338)
T KOG3946|consen 146 CAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLAAK 200 (338)
T ss_pred HHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHHHH
Confidence 9999999988854321 0145678999999999952 134467899998753
No 79
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=97.17 E-value=0.0011 Score=67.56 Aligned_cols=78 Identities=26% Similarity=0.399 Sum_probs=63.9
Q ss_pred cCCEEEEecCC-CCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHH---HhcCCCCCCCCCEEEEEeccccCcccC
Q 017774 28 LGNVHGRVEGL-NASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVL---KSTGKLGKLKRPVEVIAFSDEEGVRFQ 103 (366)
Q Consensus 28 ~gnvia~~~g~-~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l---~~~~~~~~~~~~v~~~~~~dEE~~~~~ 103 (366)
.-|+++.++|. .| .+.|++.+|-|..-.| +.|--.|.+.++...+++ +..|+ +|.++|+|+.+.+||-+
T Consensus 338 i~NIig~I~Gs~ep-D~~ViigahrDSw~~G-a~dp~sGta~Ll~i~~~~~~~~k~gw--rP~RtI~F~sWdAeEfG--- 410 (702)
T KOG2195|consen 338 IQNIIGKIEGSEEP-DRYVIIGAHRDSWTFG-AIDPNSGTALLLEIARALSKLKKRGW--RPRRTILFASWDAEEFG--- 410 (702)
T ss_pred eeeEEEEEecCcCC-CeEEEEeccccccccC-CcCCCccHHHHHHHHHHHHHHHHcCC--CccceEEEEEccchhcc---
Confidence 45899999994 55 4999999999999888 777777766666665554 67789 99999999999999987
Q ss_pred CCCcchHHhhc
Q 017774 104 STFLGSAALAG 114 (366)
Q Consensus 104 ~~~~Gs~~~~~ 114 (366)
+.||-.+++
T Consensus 411 --liGStE~~E 419 (702)
T KOG2195|consen 411 --LLGSTEWAE 419 (702)
T ss_pred --ccccHHHHH
Confidence 579988764
No 80
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=95.40 E-value=0.056 Score=48.20 Aligned_cols=67 Identities=18% Similarity=0.283 Sum_probs=54.6
Q ss_pred CeEEEecccCccc--cC---CCCCCHHHHHHHHHHHHHHHhc--CCCCCCCCCEEEEEeccccCcccCCCCcchHHhhcc
Q 017774 43 QALLIGSHLDTVV--DA---GIFDGSLGIITAISALKVLKST--GKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALAGI 115 (366)
Q Consensus 43 ~~i~l~~H~D~Vp--~g---g~~D~k~gi~~~l~a~~~l~~~--~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~~~ 115 (366)
|.|++.+.||+.. ++ |+-+.-.|++++|+++++|.+. .. ..++++|.|+|..+|-.+ +.||+.++..
T Consensus 1 ~iIlv~armDs~s~F~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~-~~~~knV~F~~F~GEs~d-----YiGS~R~vyD 74 (234)
T PF05450_consen 1 PIILVVARMDSFSFFHDLSPGADSSVSGLVALLAAAEALSKLLPDS-SNLNKNVLFAFFNGESFD-----YIGSSRFVYD 74 (234)
T ss_pred CEEEEEecccchhcccCCCCCcccchHHHHHHHHHHHHHHHhhhcc-ccccCcEEEEEecCcccc-----ccchHHHHHH
Confidence 6799999999973 22 6666778999999999999866 22 267899999999999987 5899998743
No 81
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=90.30 E-value=1.7 Score=41.57 Aligned_cols=99 Identities=17% Similarity=0.215 Sum_probs=63.0
Q ss_pred HHHHHHHHHcCCEEEEcC----------cCCEEEEec-CC-----CCCCCeEEEecccCccccC-----CCCCCHHHHHH
Q 017774 10 NLIRQWMEDAGLRTWVDH----------LGNVHGRVE-GL-----NASAQALLIGSHLDTVVDA-----GIFDGSLGIIT 68 (366)
Q Consensus 10 ~~l~~~l~~~G~~~~~~~----------~gnvia~~~-g~-----~~~~~~i~l~~H~D~Vp~g-----g~~D~k~gi~~ 68 (366)
+.+...+...|++...-. ..|+.+++. |- +...|+|++.+|+||.-.. |+--+..|+++
T Consensus 165 ~~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~lsvgADSNGSGvva 244 (555)
T KOG2526|consen 165 QHLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPGLSVGADSNGSGVVA 244 (555)
T ss_pred HHHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCCCCCCCCCCCCccHHH
Confidence 445555666778754311 237888886 32 2247999999999997322 32234467878
Q ss_pred HHHHHHHHHhcCC--CCCCCCCEEEEEeccccCcccCCCCcchHHhh
Q 017774 69 AISALKVLKSTGK--LGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (366)
Q Consensus 69 ~l~a~~~l~~~~~--~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~ 113 (366)
.|..++.+...-- .-..+.++.|+++.+--. ++.|++.-+
T Consensus 245 LLelarlfSkly~ypsTrakYnLlF~lt~aG~l-----NyqGTkkWL 286 (555)
T KOG2526|consen 245 LLELARLFSKLYDYPSTRAKYNLLFILTAAGKL-----NYQGTKKWL 286 (555)
T ss_pred HHHHHHHHHHHhcCcccccceeEEEEEccCccc-----cccchhhhh
Confidence 8999888865420 014578999999877442 245777543
No 82
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=89.08 E-value=1.1 Score=41.79 Aligned_cols=77 Identities=27% Similarity=0.319 Sum_probs=55.0
Q ss_pred CEEEEecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCC----
Q 017774 30 NVHGRVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQST---- 105 (366)
Q Consensus 30 nvia~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~---- 105 (366)
|+|+.-.+ . ..++++.+|+|.-..| ..|+..|++++++++..|...+. ...++..++||.++++-+
T Consensus 180 ~~Ia~~~~-e--n~vv~i~AH~DHW~~G-~tDN~lg~~~AV~~~~~lr~~~~------~~~lv~FtAEE~g~p~~~sfyW 249 (486)
T COG4882 180 NVIAVDGG-E--NGVVLIGAHLDHWYTG-FTDNILGVAQAVETAGRLRGRGL------AAGLVVFTAEEHGMPGMASFYW 249 (486)
T ss_pred EEEEecCC-C--CCceEEeechhhhhhc-ccchhhhHHHHHHHHHHHhhcCc------ceeEEEEeccccCCCCCcceee
Confidence 56665433 2 3799999999998665 68999999999999999988763 344555567887664432
Q ss_pred CcchHHhhccc
Q 017774 106 FLGSAALAGIL 116 (366)
Q Consensus 106 ~~Gs~~~~~~~ 116 (366)
..||+.+++..
T Consensus 250 a~GSr~~lk~~ 260 (486)
T COG4882 250 AAGSRGLLKES 260 (486)
T ss_pred cccchHHHhhc
Confidence 24788776433
No 83
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=88.58 E-value=4.5 Score=39.99 Aligned_cols=89 Identities=16% Similarity=0.127 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHcCCEEEEcC--------cCCEEEEecCCCCCCCeEEEecccCcc-----------------------c
Q 017774 7 RAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGLNASAQALLIGSHLDTV-----------------------V 55 (366)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~--------~gnvia~~~g~~~~~~~i~l~~H~D~V-----------------------p 55 (366)
..++++.+.+++.|+++++-+ .+-+++.-+|+.. .|.++...+-..- |
T Consensus 175 ~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~-~p~lv~l~Y~g~~~~~~~i~LVGKGiTFDsGG~slKp 253 (468)
T cd00433 175 YLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEE-PPRLIVLEYKGKGASKKPIALVGKGITFDTGGLSLKP 253 (468)
T ss_pred HHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCC-CCEEEEEEECCCCCCCCcEEEEcCceEecCCCccccC
Confidence 467888888888999887522 2334444344332 2444443333221 1
Q ss_pred cCCCCCCH---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCc
Q 017774 56 DAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (366)
Q Consensus 56 ~gg~~D~k---~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~ 100 (366)
..+-.+|| +|.|+.+.+++++.+. +++.+|..+...-|-..
T Consensus 254 ~~~M~~Mk~DM~GAAaVlga~~aia~l----~~~vnV~~i~~~~EN~i 297 (468)
T cd00433 254 AAGMDGMKYDMGGAAAVLGAMKAIAEL----KLPVNVVGVLPLAENMI 297 (468)
T ss_pred ccChhhccccchhHHHHHHHHHHHHHc----CCCceEEEEEEeeecCC
Confidence 22233454 6888899999999998 57899999888887753
No 84
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=88.42 E-value=1 Score=44.74 Aligned_cols=94 Identities=13% Similarity=0.104 Sum_probs=66.9
Q ss_pred CCcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-------ehHHHHHH
Q 017774 250 SSLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------LKSASYAA 322 (366)
Q Consensus 250 ~~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-------~~~~l~~~ 322 (366)
..+++|++.|+. + |+++.+.+++|+++.++.+++.+.|+++++ .+++++++... ...++.+.
T Consensus 336 ~~~t~n~g~i~~-~------~~~~~~~i~~R~~~~~~~~~i~~~i~~~~~----~~~~~v~~~~~~~p~~~~~d~plv~~ 404 (477)
T TIGR01893 336 VESSLNLGVVKT-K------ENKVIFTFLIRSSVESDKDYVTEKIESIAK----LAGARVEVSAGYPSWQPDPQSNLLDT 404 (477)
T ss_pred EEeeeeEEEEEE-c------CCEEEEEEEeCCCCchhHHHHHHHHHHHhh----hcCeEEEEecCCCcccCCCCCHHHHH
Confidence 367899999998 3 899999999999999999999999988876 34666665322 23344444
Q ss_pred HHHHhhcc-CCCCCCCCCchhhHHHHHhhhcCE
Q 017774 323 LKRMTGAT-QHEIPVIMSGAGHDAMAMSHLTKV 354 (366)
Q Consensus 323 ~~~~~g~~-~~~~~~~~~~ggtD~~~~~~~iP~ 354 (366)
+++++.+. +.++....++||+|+++|.+.+|.
T Consensus 405 l~~a~~~~~g~~~~~~~~~Ggtd~~~~~~~~~~ 437 (477)
T TIGR01893 405 ARKVYSEMFGEDPEVKVIHAGLECGIISSKIPD 437 (477)
T ss_pred HHHHHHHHHCCCCeEEEeecCccHHHHHhhCCC
Confidence 44444331 334434457799999999986554
No 85
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=88.28 E-value=5.4 Score=37.05 Aligned_cols=90 Identities=16% Similarity=0.151 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHcCCEEEEcC----------------cC-----C-EEEEecCCC-CCCCeEEEecc--------cCccc
Q 017774 7 RAGNLIRQWMEDAGLRTWVDH----------------LG-----N-VHGRVEGLN-ASAQALLIGSH--------LDTVV 55 (366)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~----------------~g-----n-via~~~g~~-~~~~~i~l~~H--------~D~Vp 55 (366)
..++++++.++++|+++++.. +| . ++.+|.|.. +..++|+|.|- ++--|
T Consensus 19 ~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i~LVGKGiTFDtGG~~lKp 98 (311)
T PF00883_consen 19 TFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPIALVGKGITFDTGGLSLKP 98 (311)
T ss_dssp HHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEEEEEEEEEEEEE-TTSSSC
T ss_pred HHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccEEEEcceEEEecCCccCCC
Confidence 578899999999999887521 11 1 667777765 44678888764 22223
Q ss_pred cCCCCCCH---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCc
Q 017774 56 DAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (366)
Q Consensus 56 ~gg~~D~k---~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~ 100 (366)
.++-+.|| +|.|+.+.+++++.+. +++.+|..+....|-..
T Consensus 99 ~~~M~~Mk~DM~GAAaV~ga~~aia~l----k~~vnV~~~l~~~EN~i 142 (311)
T PF00883_consen 99 SGGMEGMKYDMGGAAAVLGAMRAIAKL----KLPVNVVAVLPLAENMI 142 (311)
T ss_dssp STTGGGGGGGGHHHHHHHHHHHHHHHC----T-SSEEEEEEEEEEE--
T ss_pred CcchhhcccCcchHHHHHHHHHHHHHc----CCCceEEEEEEcccccC
Confidence 34444444 6888899999999988 56789988888776653
No 86
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=83.98 E-value=11 Score=37.32 Aligned_cols=89 Identities=16% Similarity=0.126 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHcCCEEEEc--------CcCCEEEEecCCCCCCCeEEEecccCc----c----------------ccCC
Q 017774 7 RAGNLIRQWMEDAGLRTWVD--------HLGNVHGRVEGLNASAQALLIGSHLDT----V----------------VDAG 58 (366)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~--------~~gnvia~~~g~~~~~~~i~l~~H~D~----V----------------p~gg 58 (366)
..++++.+.++++|+++++- ..+-+++.=+|+. ..|+++...+--. + |..+
T Consensus 192 ~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~-~~prli~l~Y~g~~~~i~LVGKGITFDsGG~slKp~~~ 270 (483)
T PRK00913 192 YLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSA-NPPRLIVLEYKGGKKPIALVGKGLTFDSGGISLKPAAG 270 (483)
T ss_pred HHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCC-CCCeEEEEEECCCCCeEEEEcCceEecCCCccCCCCcC
Confidence 35778888888889988752 2334666555553 2355555544411 1 1112
Q ss_pred CCCCH---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCc
Q 017774 59 IFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (366)
Q Consensus 59 ~~D~k---~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~ 100 (366)
-++|| +|.|+.+++++++.+. +++.+|+.+....|-..
T Consensus 271 M~~MK~DM~GAAaVlga~~aia~l----kl~vnV~~v~~l~ENm~ 311 (483)
T PRK00913 271 MDEMKYDMGGAAAVLGTMRALAEL----KLPVNVVGVVAACENMP 311 (483)
T ss_pred hhhcccccHhHHHHHHHHHHHHHc----CCCceEEEEEEeeccCC
Confidence 23444 6788889999999988 57899999998887754
No 87
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=75.25 E-value=30 Score=34.34 Aligned_cols=66 Identities=15% Similarity=0.108 Sum_probs=42.5
Q ss_pred EEEEecCCCCCCCeEEEecc--------cCccccCCCCCCH---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccC
Q 017774 31 VHGRVEGLNASAQALLIGSH--------LDTVVDAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEG 99 (366)
Q Consensus 31 via~~~g~~~~~~~i~l~~H--------~D~Vp~gg~~D~k---~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~ 99 (366)
++.+|+|......+|+|.|- ++--|..+-..|| +|.|+.+.++.++.+. +++.+|..+...-|-.
T Consensus 234 ivl~y~g~~~~~~~iaLVGKGitFDsGGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l----~l~vnv~~vl~~~ENm 309 (485)
T COG0260 234 IVLEYNGKGKAKKPIALVGKGITFDSGGISIKPAAGMDTMKYDMGGAAAVLGAMRALAEL----KLPVNVVGVLPAVENM 309 (485)
T ss_pred EEEEcCCCCCCCceEEEEcCceeecCCCcccCCccchhhhhcccchHHHHHHHHHHHHHc----CCCceEEEEEeeeccC
Confidence 44555554322355656554 2223444444555 5788889999999998 5688999988887765
Q ss_pred c
Q 017774 100 V 100 (366)
Q Consensus 100 ~ 100 (366)
.
T Consensus 310 ~ 310 (485)
T COG0260 310 P 310 (485)
T ss_pred C
Confidence 4
No 88
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=74.39 E-value=33 Score=34.51 Aligned_cols=89 Identities=15% Similarity=0.112 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHcCCEEE-Ec--------CcCCEEEEecCCCCCCCeEEEecccCc---------------c--------
Q 017774 7 RAGNLIRQWMEDAGLRTW-VD--------HLGNVHGRVEGLNASAQALLIGSHLDT---------------V-------- 54 (366)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~-~~--------~~gnvia~~~g~~~~~~~i~l~~H~D~---------------V-------- 54 (366)
..++++.+.+.++|++|+ +. +.+-+++.-+|+.. .|.++...|.-. .
T Consensus 233 ~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~-pPrli~L~Y~g~~~~~~~iaLVGKGITFDSGGisLK 311 (569)
T PTZ00412 233 FYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRH-EPYLVVFEYIGNPRSSAATALVGKGVTFDCGGLNIK 311 (569)
T ss_pred HHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCC-CCEEEEEEeCCCCCCCCcEEEEcCceEEcCCCCCCC
Confidence 356777777777899885 42 12335555455432 244444433210 0
Q ss_pred ccCCCCCCH---HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCc
Q 017774 55 VDAGIFDGS---LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (366)
Q Consensus 55 p~gg~~D~k---~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~ 100 (366)
|..+-.+|| +|.|+.|.+++++.+. +++.+|+.+....|-..
T Consensus 312 P~~~M~~MK~DMgGAAaVlga~~AiA~L----klpvnVv~iiplaENm~ 356 (569)
T PTZ00412 312 PYGSMETMHSDMMGAATVMCTLKAIAKL----QLPVNVVAAVGLAENAI 356 (569)
T ss_pred CccChhhhhccchhHHHHHHHHHHHHHc----CCCeEEEEEEEhhhcCC
Confidence 112223444 5778889999999988 56789998888887754
No 89
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=67.15 E-value=23 Score=35.33 Aligned_cols=100 Identities=11% Similarity=0.071 Sum_probs=69.6
Q ss_pred CcEEEEEEEEecCCCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee-------ehHHHHHHH
Q 017774 251 SLVCTVGEISSWPSASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK-------LKSASYAAL 323 (366)
Q Consensus 251 ~~~~~~~~I~g~g~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~-------~~~~l~~~~ 323 (366)
.+++|++.++- --+.+++.+++|+++..+.+++.++|++.+ ..++.++++... ...++.+.+
T Consensus 343 ~~S~Nlg~v~~-------~~~~~~i~~~~Rs~~~~~~~~i~~~i~~~~----~~~g~~~~~~~~~p~w~~~~ds~lv~~l 411 (485)
T PRK15026 343 ETSLNVGVVTM-------TDNNVEIHCLIRSLIDSGKDYVVSMLDSLG----KLAGAKTEAKGAYPGWQPDANSPVMHLV 411 (485)
T ss_pred EeeeEEEEEEE-------eCCEEEEEEEecCCCchHHHHHHHHHHHHH----HHcCcEEEEeCCCCCCCCCCCCHHHHHH
Confidence 36788888876 347899999999999999999999997764 344777666543 123444555
Q ss_pred HHHhhcc-CCCCCCCCCchhhHHHHHhhhcCE--EEEEEee
Q 017774 324 KRMTGAT-QHEIPVIMSGAGHDAMAMSHLTKV--CSLLCRL 361 (366)
Q Consensus 324 ~~~~g~~-~~~~~~~~~~ggtD~~~~~~~iP~--~~~~~g~ 361 (366)
.+++.+. |.++....+.||+|.+.|++..|. +..|.|.
T Consensus 412 ~~~y~e~~G~~~~~~~ihaglEcG~~~~~~p~i~~VsfGP~ 452 (485)
T PRK15026 412 RETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIGPT 452 (485)
T ss_pred HHHHHHHHCCCCeEEEEEEEehHHHHHhhCCCCCEEEECCC
Confidence 5554432 344444557799999999987666 5566554
No 90
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=66.86 E-value=6.4 Score=37.43 Aligned_cols=90 Identities=10% Similarity=-0.017 Sum_probs=56.1
Q ss_pred CCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee---ehHHHHHHHHHHhhccCCCCCCCCCc
Q 017774 264 SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK---LKSASYAALKRMTGATQHEIPVIMSG 340 (366)
Q Consensus 264 ~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~---~~~~l~~~~~~~~g~~~~~~~~~~~~ 340 (366)
.+.+.|+...-+.+|+-...+.....- . .-..|..+.+... ..+.+.+.+.++..+.+++.....++
T Consensus 219 ~aa~~i~pD~aI~vDv~~~~d~~~~~~-~---------~lg~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~~I~~Q~~~~~ 288 (350)
T TIGR03107 219 VSTTKFNPDIFFAVDCSPAGDIYGDQG-G---------KLGEGTLLRFFDPGHIMLPRMKDFLLTTAEEAGIKYQYYVAK 288 (350)
T ss_pred hHHhhCCCCEEEEEecCCcCCCCCCCc-c---------ccCCCceEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEecCC
Confidence 456667667888899876543211110 1 1123555533211 56777777777777666655555566
Q ss_pred hhhHHHH--Hhhh-cCEEEEEEeeCC
Q 017774 341 AGHDAMA--MSHL-TKVCSLLCRLNN 363 (366)
Q Consensus 341 ggtD~~~--~~~~-iP~~~~~~g~~~ 363 (366)
||||++. ++.. +|++.+.+|++.
T Consensus 289 gGtDa~~~~~~~~Gvpt~~i~ip~Ry 314 (350)
T TIGR03107 289 GGTDAGAAHLKNSGVPSTTIGVCARY 314 (350)
T ss_pred CCchHHHHHHhCCCCcEEEEccCccc
Confidence 8999994 4444 999999999875
No 91
>PRK02256 putative aminopeptidase 1; Provisional
Probab=61.43 E-value=13 Score=36.69 Aligned_cols=40 Identities=23% Similarity=0.123 Sum_probs=31.6
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcc
Q 017774 56 DAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR 101 (366)
Q Consensus 56 ~gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~ 101 (366)
.+.++|+..++.+++.++..+. .+...++++++..||.|.
T Consensus 255 ~s~rLDNr~~~~~~leal~~~~------~~~~~~~~~~~dqEEVGs 294 (462)
T PRK02256 255 GAYGQDDRVCAYTSLEALLELE------NPEKTAVVLLVDKEEIGS 294 (462)
T ss_pred eccccccHHHHHHHHHHHHhcc------cCCCeEEEEEEcccccCC
Confidence 3467899999988888876553 356799999999999874
No 92
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=56.37 E-value=39 Score=32.23 Aligned_cols=76 Identities=18% Similarity=0.183 Sum_probs=48.1
Q ss_pred CEEEEcC---cCC-EEE--EecCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEe
Q 017774 21 LRTWVDH---LGN-VHG--RVEGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAF 94 (366)
Q Consensus 21 ~~~~~~~---~gn-via--~~~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~ 94 (366)
++|.+|. .|+ -++ .++|. +...|+|.+|+..-. -+.|.-+|++.++..++.|++. +.+.+..|+|.
T Consensus 104 Y~V~IdS~l~~G~L~ygE~~ipG~--s~~EillsthiCHPs--mANdnLSG~~v~~~La~~L~~~----~~rytYRflf~ 175 (386)
T PF09940_consen 104 YEVVIDSTLEDGSLTYGEFVIPGE--SDEEILLSTHICHPS--MANDNLSGPAVLTFLAKWLKQL----PNRYTYRFLFV 175 (386)
T ss_dssp EEEEEEEEEES-EEEEEEEEE--S--SS-EEEEEEE----S---TTTTHHHHHHHHHHHHHHTTS------SSEEEEEEE
T ss_pred eEEEEeeeecCCceeEEEEEecCC--CCCeEEEEEeccCcc--cccccccHHHHHHHHHHHHhcC----CcCceEEEEEc
Confidence 5666543 344 222 44664 358999999987633 4678899999999999999988 44599999999
Q ss_pred ccccCcccCCCCcchHHhh
Q 017774 95 SDEEGVRFQSTFLGSAALA 113 (366)
Q Consensus 95 ~dEE~~~~~~~~~Gs~~~~ 113 (366)
|. + .||-..+
T Consensus 176 Pe--T-------IGsI~yL 185 (386)
T PF09940_consen 176 PE--T-------IGSITYL 185 (386)
T ss_dssp -T--T-------HHHHHHH
T ss_pred cc--c-------HHHHHHH
Confidence 86 2 4777665
No 93
>TIGR02159 PA_CoA_Oxy4 phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA.
Probab=52.27 E-value=68 Score=26.29 Aligned_cols=69 Identities=9% Similarity=-0.005 Sum_probs=39.5
Q ss_pred ceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee---ehHHHHHHHHHHhhccCCCCCC
Q 017774 267 NVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK---LKSASYAALKRMTGATQHEIPV 336 (366)
Q Consensus 267 NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~---~~~~l~~~~~~~~g~~~~~~~~ 336 (366)
++-.+.+.+.+..-+.-....+.+.+.+++.+++. --..+++++... -.+.+.+..++.++++|+.++.
T Consensus 21 ~v~gd~V~VtIt~Ty~gcpa~e~L~~~I~~aL~~~-Gv~~V~V~i~~~p~Wt~d~it~~gr~~l~~~giapp~ 92 (146)
T TIGR02159 21 DVDGGGVVVKFTPTYSGCPALEVIRQDIRDAVRAL-GVEVVEVSTSLDPPWTTDWITEDAREKLREYGIAPPA 92 (146)
T ss_pred EEECCEEEEEEEeCCCCCchHHHHHHHHHHHHHhc-CCCeEEEeEeeCCCCChHHCCHHHHHHHHhcCccCCC
Confidence 34456677777776555566666777777776542 001233333333 3466667777777767765443
No 94
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=51.71 E-value=53 Score=32.97 Aligned_cols=71 Identities=15% Similarity=0.215 Sum_probs=51.8
Q ss_pred CEEEEecCC-CCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcccCCCCcc
Q 017774 30 NVHGRVEGL-NASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVRFQSTFLG 108 (366)
Q Consensus 30 nvia~~~g~-~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~G 108 (366)
|+++.++.. .++...|+|...++..- +.. +..|++.+|+.++++++..+ ..+||.++++.+|.. |
T Consensus 5 nvy~i~rapR~d~tEaivl~~~~~~~~--~~~-n~~~v~l~lal~~~~~~~~~---wsKDii~l~~~~~~~--------g 70 (504)
T PF04114_consen 5 NVYGILRAPRGDGTEAIVLVVPWRDSD--GEY-NAGGVALALALARYFRRQSY---WSKDIIFLFTDDELA--------G 70 (504)
T ss_pred EEEEEEecCCCCCceeEEEEEecCCCC--ccc-chhhHHHHHHHHHHhhhchh---hhccEEEEecCCcch--------H
Confidence 788877643 33568899987766432 222 37889999999999999874 689999999866543 7
Q ss_pred hHHhhc
Q 017774 109 SAALAG 114 (366)
Q Consensus 109 s~~~~~ 114 (366)
.+..++
T Consensus 71 ~~awl~ 76 (504)
T PF04114_consen 71 MQAWLE 76 (504)
T ss_pred HHHHHH
Confidence 777763
No 95
>PRK09864 putative peptidase; Provisional
Probab=50.37 E-value=23 Score=33.71 Aligned_cols=94 Identities=13% Similarity=0.087 Sum_probs=53.7
Q ss_pred CCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEe-e--ehHHHHHHHHHHhhccCCCCCC-CCC
Q 017774 264 SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVER-K--LKSASYAALKRMTGATQHEIPV-IMS 339 (366)
Q Consensus 264 ~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~-~--~~~~l~~~~~~~~g~~~~~~~~-~~~ 339 (366)
++.+.|+...-+-+|+-...+.....-... .....-|.-+.+.. . ..+.+.+.+.++..+.+++... +..
T Consensus 214 ~aa~~i~PDiaIavDvt~~~d~p~~~~~~~------~~~lG~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~~Ip~Q~~~~~ 287 (356)
T PRK09864 214 TSAEHIKPDVVIVLDTAVAGDVPGIDNIKY------PLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAHNDLPLQFSTMK 287 (356)
T ss_pred HHHhcCCCCEEEEEecccCCCCCCCccccc------ccccCCCCeEEEccCCccCCHHHHHHHHHHHHHcCCCceEEEcC
Confidence 455667777788888765432211000000 00012244443221 1 5667777777777665554444 234
Q ss_pred chhhHHHHHhhh---cCEEEEEEeeCC
Q 017774 340 GAGHDAMAMSHL---TKVCSLLCRLNN 363 (366)
Q Consensus 340 ~ggtD~~~~~~~---iP~~~~~~g~~~ 363 (366)
+||||+..+... +|++.+.+|+|.
T Consensus 288 ~ggTDa~~i~~~~~Gvpt~~isiP~RY 314 (356)
T PRK09864 288 TGATDGGRYNVMGGGRPVVALCLPTRY 314 (356)
T ss_pred CCCchHHHHHHhCCCCcEEEEeeccCc
Confidence 489999998653 999999999874
No 96
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=49.35 E-value=16 Score=33.84 Aligned_cols=50 Identities=14% Similarity=0.136 Sum_probs=34.2
Q ss_pred ehHHHHHHHHHHhhccCCCCCC-CCCchhhHHHHHhhh---cCEEEEEEeeCCC
Q 017774 315 LKSASYAALKRMTGATQHEIPV-IMSGAGHDAMAMSHL---TKVCSLLCRLNNL 364 (366)
Q Consensus 315 ~~~~l~~~~~~~~g~~~~~~~~-~~~~ggtD~~~~~~~---iP~~~~~~g~~~~ 364 (366)
+.+.+.+.+.++..+.+++... ....|+||++.+... +|++.+-+|+++-
T Consensus 221 ~~~~l~~~l~~~A~~~~Ip~Q~~~~~~ggTDa~~~~~~~~Gi~t~~i~iP~ry~ 274 (292)
T PF05343_consen 221 PNPKLVDKLREIAEENGIPYQREVFSGGGTDAGAIQLSGGGIPTAVISIPCRYM 274 (292)
T ss_dssp SHHHHHHHHHHHHHHTT--EEEEEESSSSSTHHHHHTSTTSSEEEEEEEEEBST
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEecCCcccHHHHHHHcCCCCCEEEEecccccC
Confidence 4556666666666554443333 456789999998753 8999999998864
No 97
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=47.72 E-value=17 Score=30.52 Aligned_cols=44 Identities=16% Similarity=0.079 Sum_probs=27.4
Q ss_pred HHHHHHHHHHhhccCC-CCCCCCCchhhHHHHHhh--hcCEEEEEEe
Q 017774 317 SASYAALKRMTGATQH-EIPVIMSGAGHDAMAMSH--LTKVCSLLCR 360 (366)
Q Consensus 317 ~~l~~~~~~~~g~~~~-~~~~~~~~ggtD~~~~~~--~iP~~~~~~g 360 (366)
.++.+.+++++.+.+. ......++|++|++++++ ..+..++++|
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~g~tD~~~~~~~~~~~~~~i~~G 158 (189)
T PF01546_consen 112 PPLVQALQAAAQEVGGEPPEPVASGGGTDAGFLAEVKGLGIPAIGFG 158 (189)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEESSSSTHHHHHCHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHhhccccccceeccccchhhhhhhccccceeeeC
Confidence 4466677766665432 334456789999999996 4343444444
No 98
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=47.01 E-value=1.4e+02 Score=29.87 Aligned_cols=88 Identities=15% Similarity=0.021 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHcCCEEEEcC--------cCCEEEEecCCCCCCCeEEEecccCcccc--------------CCCC----
Q 017774 7 RAGNLIRQWMEDAGLRTWVDH--------LGNVHGRVEGLNASAQALLIGSHLDTVVD--------------AGIF---- 60 (366)
Q Consensus 7 ~~~~~l~~~l~~~G~~~~~~~--------~gnvia~~~g~~~~~~~i~l~~H~D~Vp~--------------gg~~---- 60 (366)
..++++.+++...|+.+++.. .+.+.+.-++.. ..|.++...|.++=+. -|+.
T Consensus 210 ~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~-~pP~ll~lsY~g~~~~~~~i~lvGKGvtfDsGGl~iK~ 288 (513)
T KOG2597|consen 210 QFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASC-EPPRLLELSYKGTSGADKTILLVGKGVTFDSGGLSIKP 288 (513)
T ss_pred HHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccC-CCCEEEEEEEcCCCCCcceEEEEecceEEecCcccccc
Confidence 468899999999998766421 222444434433 2466666666666322 1332
Q ss_pred ---------CCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCc
Q 017774 61 ---------DGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (366)
Q Consensus 61 ---------D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~ 100 (366)
|| +|.|+.+.+++++.+.+ |+-++.+++---|-..
T Consensus 289 ~~~M~~mr~dm-~GAA~v~~~~~a~~~l~----~~in~~~v~plcENm~ 332 (513)
T KOG2597|consen 289 KTGMDGMRRDM-GGAAVVLGAFRAAAQLS----LPINVHAVLPLCENMP 332 (513)
T ss_pred CCChhhhhhhc-cccHHHHHHHHHHHhcC----CCCceEEEEeeeccCC
Confidence 33 46777899999998885 4588888887776654
No 99
>PRK05015 aminopeptidase B; Provisional
Probab=44.95 E-value=2.3e+02 Score=27.74 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCc
Q 017774 64 LGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGV 100 (366)
Q Consensus 64 ~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~ 100 (366)
+|.|+.+.++.++.+. +++.+|..++...|-..
T Consensus 216 gGAAaV~ga~~~a~~~----~l~~nV~~il~~aENmi 248 (424)
T PRK05015 216 GGAATVTGALALAITR----GLNKRVKLFLCCAENLI 248 (424)
T ss_pred hHHHHHHHHHHHHHhc----CCCceEEEEEEecccCC
Confidence 5777788888888887 46889999998887754
No 100
>PRK09961 exoaminopeptidase; Provisional
Probab=44.55 E-value=23 Score=33.62 Aligned_cols=90 Identities=9% Similarity=0.019 Sum_probs=52.1
Q ss_pred cceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee---ehHHHHHHHHHHhhccCCCCCC-CCCch
Q 017774 266 SNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK---LKSASYAALKRMTGATQHEIPV-IMSGA 341 (366)
Q Consensus 266 ~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~---~~~~l~~~~~~~~g~~~~~~~~-~~~~g 341 (366)
.+.++....+.+|+-..+......-... ..-..|..+.+... ....+.+.++++..+.+.+... ...+|
T Consensus 209 a~~i~pd~~I~vDv~~~~d~~~~~~~~~-------~~lg~Gp~i~~~D~~~i~~~~l~~~l~~~A~~~~Ip~Q~~~~~gg 281 (344)
T PRK09961 209 TRAVSPDVAIVLDTACWAKNFDYGAANH-------RQIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGIPLQADMFSNG 281 (344)
T ss_pred HhccCCCEEEEEeccCCCCCCCCCCCcc-------cccCCCceEEEccCCcCCCHHHHHHHHHHHHHcCCCcEEEecCCC
Confidence 4556666788899876554221100000 01123555543321 5666777777777665544443 23457
Q ss_pred hhHHHHHhh--h-cCEEEEEEeeC
Q 017774 342 GHDAMAMSH--L-TKVCSLLCRLN 362 (366)
Q Consensus 342 gtD~~~~~~--~-iP~~~~~~g~~ 362 (366)
|||++.+.. . +|++.+.+|++
T Consensus 282 GTDa~~~~~~~~Giptv~ig~p~r 305 (344)
T PRK09961 282 GTDGGAVHLTGTGVPTVVMGPATR 305 (344)
T ss_pred cchHHHHHHhCCCCCEEEechhhh
Confidence 899997765 4 99999888865
No 101
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=44.06 E-value=36 Score=32.37 Aligned_cols=92 Identities=13% Similarity=0.051 Sum_probs=52.0
Q ss_pred CCcceeCCeEEEEEEeeCCChHHHHHHHHHHHHHHHHHHHHhCceEEEEee---ehHHHHHHHHHHhhccCCCCCCCCCc
Q 017774 264 SASNVIPGEVTFTVDLRAIDDAGRETVLYELSNQLYQICEKRSVSCIVERK---LKSASYAALKRMTGATQHEIPVIMSG 340 (366)
Q Consensus 264 ~~~NvIP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~---~~~~l~~~~~~~~g~~~~~~~~~~~~ 340 (366)
+.++-+...+-+-+|+-..-+..... + .. .....|..+.+... +...+.+-+.+...+.+++...-.++
T Consensus 221 ~~a~~i~pd~aiavd~~~~~d~~~~~--~---~~---~~lg~Gp~i~~~D~~~~~~~~l~~~L~~~A~~~~Ip~Q~~v~~ 292 (355)
T COG1363 221 TSAFRIKPDIAIAVDVTPAGDTPGVP--K---GD---VKLGKGPVIRVKDASGIYHPKLRKFLLELAEKNNIPYQVDVSP 292 (355)
T ss_pred ccccccCCCEEEEEecccccCCCCCc--c---cc---cccCCCCEEEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEecC
Confidence 45555666666667764332211111 0 00 01123555544433 45666676777666655443333333
Q ss_pred -hhhHHHHHhhh---cCEEEEEEeeCC
Q 017774 341 -AGHDAMAMSHL---TKVCSLLCRLNN 363 (366)
Q Consensus 341 -ggtD~~~~~~~---iP~~~~~~g~~~ 363 (366)
||||++.+... +|+..+.+|++.
T Consensus 293 ~ggTDA~a~~~~g~gvpta~Igip~ry 319 (355)
T COG1363 293 GGGTDAGAAHLTGGGVPTALIGIPTRY 319 (355)
T ss_pred CCCccHHHHHHcCCCCceEEEeccccc
Confidence 89999998765 999999999875
No 102
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=42.93 E-value=1.4e+02 Score=30.26 Aligned_cols=88 Identities=16% Similarity=0.149 Sum_probs=58.0
Q ss_pred HHHHHHHHHcCCEEEEcCc---------C-CEEEEecCCC-CCCCeEEEecccCccccCCCCC-CHHHHHHHHHHHHHHH
Q 017774 10 NLIRQWMEDAGLRTWVDHL---------G-NVHGRVEGLN-ASAQALLIGSHLDTVVDAGIFD-GSLGIITAISALKVLK 77 (366)
Q Consensus 10 ~~l~~~l~~~G~~~~~~~~---------g-nvia~~~g~~-~~~~~i~l~~H~D~Vp~gg~~D-~k~gi~~~l~a~~~l~ 77 (366)
.++...+++.|.++...+. | |+++.+++.+ .+...++|. ||-+-..+ +.++++-+++.+++++
T Consensus 92 ~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl~-----vP~~~~~~~~~~~v~l~lsla~~f~ 166 (617)
T KOG3566|consen 92 AWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVLV-----VPYGRSSGSNSASVALLLSLADYFS 166 (617)
T ss_pred hHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEEE-----EecccCCCcchhHHHHHHHHHHHhc
Confidence 3466777777887654332 3 7999887542 345777775 55432111 2567777788899888
Q ss_pred hcCCCCCCCCCEEEEEeccccCcccCCCCcchHHhh
Q 017774 78 STGKLGKLKRPVEVIAFSDEEGVRFQSTFLGSAALA 113 (366)
Q Consensus 78 ~~~~~~~~~~~v~~~~~~dEE~~~~~~~~~Gs~~~~ 113 (366)
+.- --.+||+++++-++- .|.....
T Consensus 167 r~~---yWsKDII~v~~d~~~--------~g~~AwL 191 (617)
T KOG3566|consen 167 RWV---YWSKDIIFVFTDGPA--------LGLDAWL 191 (617)
T ss_pred CCe---eecccEEEEEeCCcc--------ccHHHHH
Confidence 876 468999999987733 3666655
No 103
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=37.93 E-value=44 Score=31.69 Aligned_cols=49 Identities=10% Similarity=0.006 Sum_probs=33.8
Q ss_pred ehHHHHHHHHHHhhccCCCCCC-CCCchhhHHHHHhhh---cCEEEEEEeeCC
Q 017774 315 LKSASYAALKRMTGATQHEIPV-IMSGAGHDAMAMSHL---TKVCSLLCRLNN 363 (366)
Q Consensus 315 ~~~~l~~~~~~~~g~~~~~~~~-~~~~ggtD~~~~~~~---iP~~~~~~g~~~ 363 (366)
....+.+.+.++..+.+++... +...||||++.+... +|+..+.+|+|.
T Consensus 264 ~~~~l~~~l~~~A~~~~Ip~Q~~~~~~~gtDa~~~~~~~~Gi~t~~i~iP~Ry 316 (343)
T TIGR03106 264 FDYHLTRKLIRLCQDHGIPHRRDVFRYYRSDAASAVEAGHDIRTALVTFGLDA 316 (343)
T ss_pred CCHHHHHHHHHHHHHcCCCcEEEecCCCCChHHHHHHcCCCCCEEEeeccccc
Confidence 4566666666666665554443 234479999987653 999999999874
No 104
>TIGR03406 FeS_long_SufT probable FeS assembly SUF system protein SufT. The function is unknown for this protein family, but members are found almost always in operons for the the SUF system of iron-sulfur cluster biosynthesis. The SUF system is present elsewhere on the chromosome for those few species where SUF genes are not adjacent. This family shares this property of association with the SUF system with a related family, TIGR02945. TIGR02945 consists largely of a DUF59 domain (see Pfam family pfam01883), while this protein is about double the length, with a unique N-terminal domain and DUF59 C-terminal domain. A location immediately downstream of the cysteine desulfurase gene sufS in many contexts suggests the gene symbol sufT. Note that some other homologs of this family and of TIGR02945, but no actual members of this family, are found in operons associated with phenylacetic acid (or other ring-hydroxylating) degradation pathways.
Probab=37.31 E-value=2.4e+02 Score=23.86 Aligned_cols=29 Identities=10% Similarity=0.154 Sum_probs=17.7
Q ss_pred eEEEEEEeeCCChHHHHHHHHHHHHHHHH
Q 017774 272 EVTFTVDLRAIDDAGRETVLYELSNQLYQ 300 (366)
Q Consensus 272 ~~~~~~diR~~~~~~~~~~~~~i~~~~~~ 300 (366)
++.+.+.+-++.....+.+.+.+++.+.+
T Consensus 114 ~V~I~mtLt~p~c~~~~~L~~dV~~aL~~ 142 (174)
T TIGR03406 114 RVDIEMTLTAPGCGMGPVLVEDVEDKVLA 142 (174)
T ss_pred EEEEEEEeCCCCCcHHHHHHHHHHHHHHh
Confidence 56666666555455555666677766654
No 105
>PRK02813 putative aminopeptidase 2; Provisional
Probab=33.11 E-value=1.1e+02 Score=30.12 Aligned_cols=53 Identities=25% Similarity=0.280 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCEE-EEc-----Cc---------C-CEEEEecCCCC--CCCeEEEecccCcc
Q 017774 2 SPASVRAGNLIRQWMEDAGLRT-WVD-----HL---------G-NVHGRVEGLNA--SAQALLIGSHLDTV 54 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~-~~~-----~~---------g-nvia~~~g~~~--~~~~i~l~~H~D~V 54 (366)
|+-+..+.+++++.|++.||.- ... .. + .++|-.-|..+ +..-.++.+|+|..
T Consensus 18 s~t~~hav~~~~~~L~~~Gf~~l~e~~~w~l~~g~kyy~~r~~~sliAf~vg~~~~~~~g~~iv~aH~DsP 88 (428)
T PRK02813 18 SPSPFHAVANVAQRLEAAGFTELDETDAWKLEPGGRYYVVRNGSSLIAFRVGEGAPAETGFRIVGAHTDSP 88 (428)
T ss_pred CCCHHHHHHHHHHHHHHcCCeeccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCeEEEEEeccCC
Confidence 4557889999999999999952 111 11 1 37776655543 23467899999986
No 106
>PRK06156 hypothetical protein; Provisional
Probab=29.87 E-value=1.3e+02 Score=30.23 Aligned_cols=25 Identities=16% Similarity=0.202 Sum_probs=21.1
Q ss_pred EEEEEEEEecCCCcceeCCeEEEEEE
Q 017774 253 VCTVGEISSWPSASNVIPGEVTFTVD 278 (366)
Q Consensus 253 ~~~~~~I~g~g~~~NvIP~~~~~~~d 278 (366)
.+++..++| |+..|+||+.|.+.+.
T Consensus 240 ~~~l~~~~g-G~~~n~ip~~a~~~~~ 264 (520)
T PRK06156 240 GAEIVAMTG-GAFANQIPQTAVATLS 264 (520)
T ss_pred ceeEEEEEc-CCcCCCCCCccEEEEe
Confidence 466788899 8999999999998843
No 107
>PF05411 Peptidase_C32: Equine arteritis virus putative proteinase; InterPro: IPR008742 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases corresponds to MEROPS peptidase family C32 (clan CA). The type example is equine arteritis virus-type cysteine proteinase (porcine reproductive and respiratory syndrome virus), which is involved in viral polyprotein processing [].; GO: 0003968 RNA-directed RNA polymerase activity, 0004197 cysteine-type endopeptidase activity, 0004252 serine-type endopeptidase activity, 0005524 ATP binding, 0008270 zinc ion binding, 0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; PDB: 3MTV_A.
Probab=29.02 E-value=1.1e+02 Score=24.29 Aligned_cols=48 Identities=17% Similarity=0.254 Sum_probs=29.2
Q ss_pred HHHHHHHHHcCCEEEEcCcCCEEEEecC-CC-----------CCCCeEEEecccCccccC
Q 017774 10 NLIRQWMEDAGLRTWVDHLGNVHGRVEG-LN-----------ASAQALLIGSHLDTVVDA 57 (366)
Q Consensus 10 ~~l~~~l~~~G~~~~~~~~gnvia~~~g-~~-----------~~~~~i~l~~H~D~Vp~g 57 (366)
.||..+|+-+|++..++..|.+++..-. .+ |..|...-.+-+|+||..
T Consensus 49 kYLqrRLqv~GLraV~d~~G~~~v~af~~~~SwirHv~l~~ep~~pgfv~l~r~~Vvpn~ 108 (127)
T PF05411_consen 49 KYLQRRLQVNGLRAVVDPYGPIHVYAFSCPESWIRHVSLADEPVPPGFVRLGRIRVVPNT 108 (127)
T ss_dssp HHHHHHHHTTTEEEEE-TT-SEEEEEESSTT-S-EEEEETTS---TTEEEEEEEEEEESS
T ss_pred HHHHHHHHhcCeeEEECCCCCEEEEEecCCccceeeeEecCCCCCCCcEEEEEEEEEeCC
Confidence 5899999999999888887876554322 11 223555555667777643
No 108
>PF03991 Prion_octapep: Copper binding octapeptide repeat; InterPro: IPR020949 Prion protein (PrP-c) [, , ] is a small glycoprotein found in high quantity in the brain of animals infected with certain degenerative neurological diseases, such as sheep scrapie and bovine spongiform encephalopathy (BSE), and the human dementias Creutzfeldt-Jacob disease (CJD) and Gerstmann-Straussler syndrome (GSS). PrP-c is encoded in the host genome and is expressed both in normal and infected cells. During infection, however, the PrP-c molecule become altered (conformationally rather than at the amino acid level) to an abnormal isoform, PrP-sc. In detergent-treated brain extracts from infected individuals, fibrils composed of polymers of PrP-sc, namely scrapie-associated fibrils or prion rods, can be evidenced by electron microscopy. The precise function of the normal PrP isoform in healthy individuals remains unknown. Several results, mainly obtained in transgenic animals, indicate that PrP-c might play a role in long-term potentiation, in sleep physiology, in oxidative burst compensation (PrP can fix four Cu2+ through its octarepeat domain), in interactions with the extracellular matrix (PrP-c can bind to the precursor of the laminin receptor, LRP), in apoptosis and in signal transduction (costimulation of PrP-c induces a modulation of Fyn kinase phosphorylation) []. The normal isoform, PrP-c, is anchored at the cell membrane, in rafts, through a glycosyl phosphatidyl inositol (GPI); its half-life at the cell surface is 5 h, after which the protein is internalised through a caveolae-dependent mechanism and degraded in the endolysosome compartment. Conversion between PrP-c and PrP-sc occurs likely during the internalisation process. This repeat is found at the amino terminus of mammalian prion proteins. It has been shown to bind to copper [].
Probab=27.39 E-value=33 Score=13.42 Aligned_cols=6 Identities=17% Similarity=0.268 Sum_probs=2.9
Q ss_pred ccCCCC
Q 017774 55 VDAGIF 60 (366)
Q Consensus 55 p~gg~~ 60 (366)
|++|+|
T Consensus 1 phgG~W 6 (8)
T PF03991_consen 1 PHGGGW 6 (8)
T ss_pred CCCCcC
Confidence 445554
No 109
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=27.15 E-value=60 Score=27.06 Aligned_cols=25 Identities=8% Similarity=0.282 Sum_probs=22.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEEc
Q 017774 2 SPASVRAGNLIRQWMEDAGLRTWVD 26 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~~~~ 26 (366)
.|+.++++++|+..|++.|++|++.
T Consensus 11 ~GqT~kIA~~iA~~L~e~g~qvdi~ 35 (175)
T COG4635 11 DGQTRKIAEYIASHLRESGIQVDIQ 35 (175)
T ss_pred CCcHHHHHHHHHHHhhhcCCeeeee
Confidence 3678899999999999999999764
No 110
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=27.02 E-value=3.1e+02 Score=24.68 Aligned_cols=61 Identities=26% Similarity=0.237 Sum_probs=40.6
Q ss_pred EEEEecCC-----CCCCCeEEEecccCcccc-----CCCCCCHHHHHHHHHHHHHH--HhcCCCCCCCCCEEEEE
Q 017774 31 VHGRVEGL-----NASAQALLIGSHLDTVVD-----AGIFDGSLGIITAISALKVL--KSTGKLGKLKRPVEVIA 93 (366)
Q Consensus 31 via~~~g~-----~~~~~~i~l~~H~D~Vp~-----gg~~D~k~gi~~~l~a~~~l--~~~~~~~~~~~~v~~~~ 93 (366)
+-..++|+ +.+.|++.+.|-+--+-. |=..|.-+++++.-.|++.+ +++|. .++++|.+.-
T Consensus 15 vki~ipG~~Gk~~Gg~aptlGIiGRLGgigARP~~iGlVSDaDGAi~ala~a~KL~~M~~kGd--~L~GDVii~T 87 (276)
T PF06675_consen 15 VKILIPGSNGKSSGGSAPTLGIIGRLGGIGARPERIGLVSDADGAIAALAAALKLLDMQAKGD--VLPGDVIITT 87 (276)
T ss_pred EEEEecCccCccCCCCCCeeEEEeecccccccccceeeeecCchHHHHHHHHHHHHHHHHcCC--ccCCcEEEEE
Confidence 55566663 234688888887765522 12357777777766676655 67786 8999998864
No 111
>COG1362 LAP4 Aspartyl aminopeptidase [Amino acid transport and metabolism]
Probab=26.79 E-value=1.6e+02 Score=28.65 Aligned_cols=53 Identities=25% Similarity=0.304 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCEE-E-E----c---------CcC-CEEEEecCCC--CCCCeEEEecccCcc
Q 017774 2 SPASVRAGNLIRQWMEDAGLRT-W-V----D---------HLG-NVHGRVEGLN--ASAQALLIGSHLDTV 54 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~-~-~----~---------~~g-nvia~~~g~~--~~~~~i~l~~H~D~V 54 (366)
|+-+..++.++++.|.+.||+- + . + ..| +++|.+-|.+ +..+--++.+|.|.-
T Consensus 20 spTpyh~v~~i~~~L~~~Gf~~l~e~~~w~~~~ggkyf~~r~gssliAf~ig~~~~~~~gf~IigaHtDSP 90 (437)
T COG1362 20 SPTPYHVVANIAERLLKAGFRELEEKDAWKDKPGGKYFVTRNGSSLIAFIIGKKWKLESGFRIIGAHTDSP 90 (437)
T ss_pred CCChHHHHHHHHHHHHHcCchhhhhhhcccccCCCeEEEEcCCceEEEEEecCCCCCCCCeEEEEeecCCC
Confidence 5667889999999999999853 1 1 1 123 4777766654 345677888999995
No 112
>PRK02813 putative aminopeptidase 2; Provisional
Probab=26.70 E-value=68 Score=31.45 Aligned_cols=38 Identities=21% Similarity=0.177 Sum_probs=29.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeccccCcc
Q 017774 57 AGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIAFSDEEGVR 101 (366)
Q Consensus 57 gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~~~dEE~~~ 101 (366)
+.++|+..++.+++.++..++ . +.+++++++..||.|.
T Consensus 230 s~~lDnr~~~~~~l~al~~~~------~-~~~~~~~~~d~EEVGs 267 (428)
T PRK02813 230 SGRLDNLSSCHAGLEALLAAA------S-DATNVLAAFDHEEVGS 267 (428)
T ss_pred EecchhHHHHHHHHHHHHhcC------C-CCeEEEEEEecCccCC
Confidence 467899999877777765442 3 6799999999999874
No 113
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=25.83 E-value=1.8e+02 Score=28.96 Aligned_cols=53 Identities=13% Similarity=0.268 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHHHHHcCCEE-EEc-----CcC----------CEEEEecCCC---CCCCeEEEecccCcc
Q 017774 2 SPASVRAGNLIRQWMEDAGLRT-WVD-----HLG----------NVHGRVEGLN---ASAQALLIGSHLDTV 54 (366)
Q Consensus 2 s~~E~~~~~~l~~~l~~~G~~~-~~~-----~~g----------nvia~~~g~~---~~~~~i~l~~H~D~V 54 (366)
|+-+..+.+++++.|++.||.- ... ..| .++|-.-|.. +...-.++.+|.|.-
T Consensus 19 s~t~~hav~~~~~~L~~~GF~~l~e~~~w~l~~g~kyyv~r~~ssl~Af~vg~~~~~~~~g~~ivgaHtDsP 90 (465)
T PTZ00371 19 TGSPFHAVQELKERLKKSGFKQLNEGENWKLEKGGKYYLTRNNSTIVAFTVGKKFDAPNGGFKIVGAHTDSP 90 (465)
T ss_pred CCCHHHHHHHHHHHHHHCcCEEccccccCccCCCCEEEEEcCCcEEEEEEeCCCCccCCCCeEEEEEeccCC
Confidence 4557889999999999999963 111 111 2666554544 223567889999985
No 114
>PF01726 LexA_DNA_bind: LexA DNA binding domain; InterPro: IPR006199 This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins in bacteria. The aligned region contains a variant form of the helix-turn-helix DNA binding motif []. This domain usually at the N terminus is found associated with IPR006198 from INTERPRO the auto-proteolytic domain of LexA 3.4.21.88 from EC.; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 1LEA_A 1JHH_A 3JSP_A 1JHF_A 3JSO_B 1LEB_A 3K2Z_A.
Probab=25.79 E-value=79 Score=21.88 Aligned_cols=24 Identities=17% Similarity=0.362 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEE
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTW 24 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~ 24 (366)
||....++.+||.++.++.|+...
T Consensus 4 LT~rQ~~vL~~I~~~~~~~G~~Pt 27 (65)
T PF01726_consen 4 LTERQKEVLEFIREYIEENGYPPT 27 (65)
T ss_dssp --HHHHHHHHHHHHHHHHHSS---
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCC
Confidence 578889999999999999999754
No 115
>COG4310 Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain [General function prediction only]
Probab=22.94 E-value=2.8e+02 Score=25.94 Aligned_cols=73 Identities=22% Similarity=0.231 Sum_probs=48.3
Q ss_pred HHHcCCEEEEc---CcCC-EEEEe--cCCCCCCCeEEEecccCccccCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCE
Q 017774 16 MEDAGLRTWVD---HLGN-VHGRV--EGLNASAQALLIGSHLDTVVDAGIFDGSLGIITAISALKVLKSTGKLGKLKRPV 89 (366)
Q Consensus 16 l~~~G~~~~~~---~~gn-via~~--~g~~~~~~~i~l~~H~D~Vp~gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v 89 (366)
|++-.++|.+| +.|+ .++.+ +|+ ....|+|.+|+=.- .=+.|+-.|+|.....++.|+.. +-+.+-
T Consensus 148 l~dgdyeVvIDae~~dG~L~ygefi~rg~--~~~eiLlst~lCHP--SmaNdn~SG~all~~lak~l~~~----ktrysY 219 (435)
T COG4310 148 LEDGDYEVVIDAEHEDGSLDYGEFIHRGT--SKDEILLSTYLCHP--SMANDNLSGLALLTFLAKALKSL----KTRYSY 219 (435)
T ss_pred hhcCCeEEEEecccccCceehhheeccCC--ccceeeeeecccCh--hhccCccchHHHHHHHHHHHHhc----cceeeE
Confidence 44445777665 3466 33433 454 45899999985322 22457778888888888888876 557788
Q ss_pred EEEEecc
Q 017774 90 EVIAFSD 96 (366)
Q Consensus 90 ~~~~~~d 96 (366)
.|+|.|.
T Consensus 220 Rfvf~P~ 226 (435)
T COG4310 220 RFVFAPE 226 (435)
T ss_pred EEEeccc
Confidence 8888775
No 116
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=22.52 E-value=1.2e+02 Score=30.16 Aligned_cols=44 Identities=16% Similarity=0.100 Sum_probs=29.2
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEE-eccccCcc
Q 017774 56 DAGIFDGSLGIITAISALKVLKSTGKLGKLKRPVEVIA-FSDEEGVR 101 (366)
Q Consensus 56 ~gg~~D~k~gi~~~l~a~~~l~~~~~~~~~~~~v~~~~-~~dEE~~~ 101 (366)
.+.++|+..++.++|.++..++.... +.+..+.+++ +..||.|.
T Consensus 246 ~s~rlDnr~~~~~~l~al~~~~~~~~--~~~~~~~v~~~~d~EEVGs 290 (465)
T PTZ00371 246 SSPRLDNLGSSFCAFKALTEAVESLG--ENSSNIRMVCLFDHEEVGS 290 (465)
T ss_pred EEecchhHHHHHHHHHHHHhcccccc--CCCCceEEEEEECCcCCCC
Confidence 34679999999888888876643200 1134455555 89999874
No 117
>PF09650 PHA_gran_rgn: Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn); InterPro: IPR013433 Proteins in this entry are encoded by genes involved in either polyhydroxyalkanoic acid (PHA) biosynthesis or utilisation, including proteins at found at the surface of PHA granules. These proteins have so far been predominantly found in the Pseudomonadales, Xanthomonadales, and Vibrionales, all of which belong to the Gammaproteobacteria.
Probab=21.58 E-value=1.6e+02 Score=21.63 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=25.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCceEEEEe
Q 017774 283 DDAGRETVLYELSNQLYQICEKRSVSCIVER 313 (366)
Q Consensus 283 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~ 313 (366)
=....+++.+++++.+.++..+|++++++..
T Consensus 7 H~Lg~~eAr~~~~~~~~~l~~~~~~~~~W~g 37 (87)
T PF09650_consen 7 HSLGREEARRRAEELAEKLAEEYGVECTWEG 37 (87)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCCEEEEEc
Confidence 3455788899999999999999998887754
No 118
>smart00853 MutL_C MutL C terminal dimerisation domain. MutL and MutS are key components of the DNA repair machinery that corrects replication errors. MutS recognises mispaired or unpaired bases in a DNA duplex and in the presence of ATP, recruits MutL to form a DNA signaling complex for repair. The N terminal region of MutL contains the ATPase domain and the C terminal is involved in dimerisation.
Probab=20.09 E-value=2.2e+02 Score=22.33 Aligned_cols=26 Identities=12% Similarity=0.110 Sum_probs=21.2
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEc
Q 017774 1 MSPASVRAGNLIRQWMEDAGLRTWVD 26 (366)
Q Consensus 1 ~s~~E~~~~~~l~~~l~~~G~~~~~~ 26 (366)
+|..|........+.|+++||..+..
T Consensus 61 l~~~e~~~l~~~~~~l~~~Gf~~~~~ 86 (136)
T smart00853 61 LSPEEAALLEEHQELLARLGFELEIF 86 (136)
T ss_pred cCHHHHHHHHHHHHHHHHcCeEEEcc
Confidence 47788888888899999999987643
Done!