BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017775
(366 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 175/289 (60%), Gaps = 9/289 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A +FVGTA YV P
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANSFVGTAQYVSP 200
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 260
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKLAS 332
+ R G GY LK HPFF+ + W+N+ QTPPKL +
Sbjct: 261 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLTA 309
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 174/289 (60%), Gaps = 9/289 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 200
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 260
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKLAS 332
+ R G GY LK HPFF+ + W+N+ QTPPKL +
Sbjct: 261 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLTA 309
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 174/289 (60%), Gaps = 9/289 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANAFVGTAQYVSP 201
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKLAS 332
+ R G GY LK HPFF+ + W+N+ QTPPKL +
Sbjct: 262 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLTA 310
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 174/287 (60%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A +FVGTA YV P
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANSFVGTAQYVSP 204
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 264
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 265 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 259 bits (662), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 174/289 (60%), Gaps = 9/289 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 201
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKLAS 332
+ R G GY LK HPFF+ + W+N+ QTPPKL +
Sbjct: 262 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLTA 310
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 173/288 (60%), Gaps = 9/288 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 178
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 238
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKLA 331
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 239 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT 286
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 173/287 (60%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 185
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 245
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 246 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 292
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 173/287 (60%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 179
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 239
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 286
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 173/287 (60%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 203
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 173/287 (60%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 203
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 173/287 (60%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 201
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 262 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 173/288 (60%), Gaps = 9/288 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 181
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 241
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKLA 331
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 242 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKLT 289
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 173/287 (60%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 204
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 264
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 265 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 173/287 (60%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 203
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 258 bits (658), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 173/287 (60%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 206
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 207 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARD 266
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 267 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 313
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 257 bits (657), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 172/286 (60%), Gaps = 9/286 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 180
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 240
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPK 329
+ R G GY LK HPFF+ + W+N+ QTPPK
Sbjct: 241 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPK 286
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 174/287 (60%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + G L I G E RFYTAE+V ALEY+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A +FVGTA YV P
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANSFVGTAQYVSP 203
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A+ +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 172/287 (59%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S V A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 201
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 261
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 262 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 172/287 (59%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+F FQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 208
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E+LIFQ+II + FP F
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 268
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 269 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 315
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 254 bits (649), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 171/287 (59%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 203
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E LIF +II + FP F
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARD 263
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 254 bits (648), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 171/287 (59%), Gaps = 9/287 (3%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+DF+ GKI G GS+S VV A+++ T YA+KI++K+ I KENK YV ER V+ +LDH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P V+L+FTFQD LY L + GEL I G E RFYTAE+V ALEY+H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G+IHRD+KPEN+LL D HI+I DFG+ K VL + +A FVGTA YV P
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAK--------VLSPESKQARANXFVGTAQYVSP 203
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXX 284
E+L A +DLWALGC +YQ+++G PF+ +E LIF +II + FP F
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARD 263
Query: 285 XXXXXXXXXPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQTPPKL 330
+ R G GY LK HPFF+ + W+N+ QTPPKL
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 162/306 (52%), Gaps = 19/306 (6%)
Query: 30 SKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFITKE 86
S++ R P E + FEL ++ G G Y KV + +K+ +TG ++A+K++ K I +
Sbjct: 3 SETSVNRGP-EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN 61
Query: 87 NK-TAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSED 145
K TA+ K ER +L+++ HP +V L + FQ LY+ LE GGELF Q+ +G ED
Sbjct: 62 AKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED 121
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK-PMQDSRITVLP 204
A FY AE+ AL ++H G+I+RD+KPEN++L GH+K+ DFG K + D +T
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT--- 178
Query: 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIF 264
TF GT Y+ PE+L S D W+LG +Y ML+G PF +
Sbjct: 179 --------HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI 230
Query: 265 QRIIARDIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI-- 322
+I+ + P Y + + R GAGPG ++ HPFF+ I+W+ +
Sbjct: 231 DKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLA 290
Query: 323 RGQTPP 328
R PP
Sbjct: 291 RKVEPP 296
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 161/306 (52%), Gaps = 19/306 (6%)
Query: 30 SKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFITKE 86
S++ R P E + FEL ++ G G Y KV + +K+ +TG ++A+K++ K I +
Sbjct: 3 SETSVNRGP-EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN 61
Query: 87 NK-TAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSED 145
K TA+ K ER +L+++ HP +V L + FQ LY+ LE GGELF Q+ +G ED
Sbjct: 62 AKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED 121
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK-PMQDSRITVLP 204
A FY AE+ AL ++H G+I+RD+KPEN++L GH+K+ DFG K + D +T
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT--- 178
Query: 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIF 264
F GT Y+ PE+L S D W+LG +Y ML+G PF +
Sbjct: 179 --------HXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI 230
Query: 265 QRIIARDIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI-- 322
+I+ + P Y + + R GAGPG ++ HPFF+ I+W+ +
Sbjct: 231 DKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLA 290
Query: 323 RGQTPP 328
R PP
Sbjct: 291 RKVEPP 296
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 156/287 (54%), Gaps = 16/287 (5%)
Query: 47 FELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
FEL K+ G GS+ KV KKI D +YA+K++ KK K K+ER +L +++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDRVRTKMERDILVEVN 84
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +V+L + FQ LY+ L+ GG+LF +++ + +E++ +FY AE+ AL+++HS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+G+I+RD+KPEN+LL +GHIK+ DFG K D + KA +F GT Y+
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID----------HEKKAYSFCGTVEYMA 194
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PEV+N T D W+ G +++ML+GT PF+ I+ + P + S
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQ 254
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI--RGQTPP 328
P+ R GAGP G +K H FF IDW + R PP
Sbjct: 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPP 301
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 156/287 (54%), Gaps = 16/287 (5%)
Query: 47 FELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
FEL K+ G GS+ KV KKI D +YA+K++ KK K K+ER +L +++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDRVRTKMERDILVEVN 85
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +V+L + FQ LY+ L+ GG+LF +++ + +E++ +FY AE+ AL+++HS
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+G+I+RD+KPEN+LL +GHIK+ DFG K D + KA +F GT Y+
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID----------HEKKAYSFCGTVEYMA 195
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PEV+N T D W+ G +++ML+GT PF+ I+ + P + S
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQ 255
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI--RGQTPP 328
P+ R GAGP G +K H FF IDW + R PP
Sbjct: 256 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPP 302
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 156/287 (54%), Gaps = 16/287 (5%)
Query: 47 FELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
FEL K+ G GS+ KV KKI D +YA+K++ KK K K+ER +L +++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDRVRTKMERDILVEVN 84
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +V+L + FQ LY+ L+ GG+LF +++ + +E++ +FY AE+ AL+++HS
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+G+I+RD+KPEN+LL +GHIK+ DFG K D + KA +F GT Y+
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID----------HEKKAYSFCGTVEYMA 194
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PEV+N T D W+ G +++ML+GT PF+ I+ + P + S
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQ 254
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI--RGQTPP 328
P+ R GAGP G +K H FF IDW + R PP
Sbjct: 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPP 301
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 156/287 (54%), Gaps = 16/287 (5%)
Query: 47 FELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
FEL K+ G GS+ KV +K+ D+G +YA+K++ KK K K+ER +L ++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL-KKATLKVRDRVRTKMERDILADVN 88
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP VV+L + FQ LY+ L+ GG+LF +++ + +E++ +FY AE+ L+++HS
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+G+I+RD+KPEN+LL +GHIK+ DFG K D + KA +F GT Y+
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID----------HEKKAYSFCGTVEYMA 198
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PEV+N + D W+ G +++ML+G+ PF+ I+ + P + S
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQ 258
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI--RGQTPP 328
P+ R G+GP G +K H F+ IDW + R PP
Sbjct: 259 SLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPP 305
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 153/281 (54%), Gaps = 13/281 (4%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
+S+QDF++ + G GS+ +V + G YA+K++ K+ + + + + ER++L
Sbjct: 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 62
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+ HP ++R++ TFQD ++M ++ EGGELF + A+FY AEV ALEY+
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL 122
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
HS +I+RD+KPEN+LL +GHIKI DFG K + D GT Y
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-------------TYXLCGTPDY 169
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEV+++ P D W+ G +Y+ML+G +PF D++ +++I+ ++RFP +F+
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNED 229
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI 322
S R G G +K HP+FK + W+ +
Sbjct: 230 VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKL 270
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 145/281 (51%), Gaps = 12/281 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
++ DF+ K+ G G++ KV+ ++ TG YA+KI+ K+ I +++ A+ E VL
Sbjct: 6 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP + L + FQ L +E GGELF ++ + +E+ ARFY AE+V ALEY+H
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 125
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC-TFVGTAAY 221
S +++RDIK ENL+L DGHIKI DFG K SD TF GT Y
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDGATMKTFCGTPEY 174
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP S
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPE 234
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI 322
P R G GP + H FF I+W+++
Sbjct: 235 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDV 275
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 145/281 (51%), Gaps = 12/281 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
++ DF+ K+ G G++ KV+ ++ TG YA+KI+ K+ I +++ A+ E VL
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP + L + FQ L +E GGELF ++ + +E+ ARFY AE+V ALEY+H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC-TFVGTAAY 221
S +++RDIK ENL+L DGHIKI DFG K SD TF GT Y
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDGATMKTFCGTPEY 171
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP S
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPE 231
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI 322
P R G GP + H FF I+W+++
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDV 272
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 145/281 (51%), Gaps = 12/281 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
++ DF+ K+ G G++ KV+ ++ TG YA+KI+ K+ I +++ A+ E VL
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP + L + FQ L +E GGELF ++ + +E+ ARFY AE+V ALEY+H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC-TFVGTAAY 221
S +++RDIK ENL+L DGHIKI DFG K SD TF GT Y
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDGATMKTFCGTPEY 171
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP S
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPE 231
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI 322
P R G GP + H FF I+W+++
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDV 272
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 144/281 (51%), Gaps = 12/281 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
++ DF+ K+ G G++ KV+ ++ TG YA+KI+ K+ I +++ A+ E VL
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP + L + FQ L +E GGELF ++ + +E+ ARFY AE+V ALEY+H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC-TFVGTAAY 221
S +++RDIK ENL+L DGHIKI DFG K SD F GT Y
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDGATMKXFCGTPEY 171
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP S
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPE 231
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI 322
P R G GP + H FF I+W+++
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDV 272
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 144/281 (51%), Gaps = 12/281 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
++ DF+ K+ G G++ KV+ ++ TG YA+KI+ K+ I +++ A+ E VL
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP + L + FQ L +E GGELF ++ + +E+ ARFY AE+V ALEY+H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC-TFVGTAAY 221
S +++RDIK ENL+L DGHIKI DFG K SD F GT Y
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDGATMKXFCGTPEY 171
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP S
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPE 231
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI 322
P R G GP + H FF I+W+++
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDV 272
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 180 bits (457), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 148/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+IK+ADFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 144/281 (51%), Gaps = 12/281 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
++ DF+ K+ G G++ KV+ ++ TG YA+KI+ K+ I +++ A+ E VL
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP + L + FQ L +E GGELF ++ + +E+ ARFY AE+V ALEY+H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC-TFVGTAAY 221
S +++RDIK ENL+L DGHIKI DFG K SD F GT Y
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDGATMKXFCGTPEY 171
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP S
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPE 231
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI 322
P R G GP + H FF I+W+++
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDV 272
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 144/281 (51%), Gaps = 12/281 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
++ DF+ K+ G G++ KV+ ++ TG YA+KI+ K+ I +++ A+ E VL
Sbjct: 8 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP + L + FQ L +E GGELF ++ + +E+ ARFY AE+V ALEY+H
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC-TFVGTAAY 221
S +++RDIK ENL+L DGHIKI DFG K SD F GT Y
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDGATMKXFCGTPEY 176
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP S
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPE 236
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI 322
P R G GP + H FF I+W+++
Sbjct: 237 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDV 277
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 154/290 (53%), Gaps = 23/290 (7%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
+QDF+L ++ G GSY+KV+ + T +YA++++ K+ + + +V+ E+ V +Q
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 102 L-DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
+HP +V L FQ L+ +E GG+L + + L E+ ARFY+AE+ AL Y
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
+H G+I+RD+K +N+LL ++GHIK+ D+G K D TF GT
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----------EGLRPGDTTSTFCGTPN 218
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF----------KDTSEWLIFQRIIAR 270
Y+ PE+L F D WALG +++M++G SPF ++T ++L FQ I+ +
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-FQVILEK 277
Query: 271 DIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPG-GYAVLKMHPFFKGIDW 319
IR P S P R G P G+A ++ HPFF+ +DW
Sbjct: 278 QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW 327
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 148/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + T GT Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWTLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 148/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + T GT Y+
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWTLCGTPEYLA 192
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 252
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 253 DLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 288
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 150/294 (51%), Gaps = 13/294 (4%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P+ ++ +FE K+ G G++ KV+ K+ TG YA+KI+ K+ I +++ A+ E
Sbjct: 141 PKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 200
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
VL HP + L ++FQ L +E GGELF ++ + SED ARFY AE+V A
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 260
Query: 158 LEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L+Y+HS +++RD+K ENL+L DGHIKI DFG K T+ TF
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK----------TFC 310
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
GT Y+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 370
Query: 277 YFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI--RGQTPP 328
P R G G + H FF GI W+++ + +PP
Sbjct: 371 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 424
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 150/294 (51%), Gaps = 13/294 (4%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P+ ++ +FE K+ G G++ KV+ K+ TG YA+KI+ K+ I +++ A+ E
Sbjct: 144 PKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 203
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
VL HP + L ++FQ L +E GGELF ++ + SED ARFY AE+V A
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 263
Query: 158 LEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L+Y+HS +++RD+K ENL+L DGHIKI DFG K T+ TF
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM----------KTFC 313
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
GT Y+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR 373
Query: 277 YFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI--RGQTPP 328
P R G G + H FF GI W+++ + +PP
Sbjct: 374 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 427
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 148/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GG++F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+IK+ADFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 148/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GG++F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+IK+ADFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 153/290 (52%), Gaps = 23/290 (7%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
+QDF+L ++ G GSY+KV+ + T +YA+K++ K+ + + +V+ E+ V +Q
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 102 L-DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
+HP +V L FQ L+ +E GG+L + + L E+ ARFY+AE+ AL Y
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
+H G+I+RD+K +N+LL ++GHIK+ D+G K D F GT
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----------EGLRPGDTTSXFCGTPN 171
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF----------KDTSEWLIFQRIIAR 270
Y+ PE+L F D WALG +++M++G SPF ++T ++L FQ I+ +
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-FQVILEK 230
Query: 271 DIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPG-GYAVLKMHPFFKGIDW 319
IR P S P R G P G+A ++ HPFF+ +DW
Sbjct: 231 QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW 280
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENL++ G+IK+ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 153/290 (52%), Gaps = 23/290 (7%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
+QDF+L ++ G GSY+KV+ + T +YA+K++ K+ + + +V+ E+ V +Q
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 102 L-DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
+HP +V L FQ L+ +E GG+L + + L E+ ARFY+AE+ AL Y
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
+H G+I+RD+K +N+LL ++GHIK+ D+G K D F GT
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----------EGLRPGDTTSXFCGTPN 186
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF----------KDTSEWLIFQRIIAR 270
Y+ PE+L F D WALG +++M++G SPF ++T ++L FQ I+ +
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-FQVILEK 245
Query: 271 DIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPG-GYAVLKMHPFFKGIDW 319
IR P S P R G P G+A ++ HPFF+ +DW
Sbjct: 246 QIRIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDW 295
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENL++ G+IK+ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 153/290 (52%), Gaps = 23/290 (7%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
+QDF+L ++ G GSY+KV+ + T +YA+K++ K+ + + +V+ E+ V +Q
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 102 L-DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
+HP +V L FQ L+ +E GG+L + + L E+ ARFY+AE+ AL Y
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
+H G+I+RD+K +N+LL ++GHIK+ D+G K D F GT
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----------EGLRPGDTTSXFCGTPN 175
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF----------KDTSEWLIFQRIIAR 270
Y+ PE+L F D WALG +++M++G SPF ++T ++L FQ I+ +
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-FQVILEK 234
Query: 271 DIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPG-GYAVLKMHPFFKGIDW 319
IR P S P R G P G+A ++ HPFF+ +DW
Sbjct: 235 QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW 284
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 148/281 (52%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G P G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDW 302
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 177 bits (448), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENL++ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P + +L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENL++ G+IK+ DFG K ++ + GT Y+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-------------GRTWXLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K +TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENL++ G+IK+ DFG K ++ + GT Y+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-------------GRTWXLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P + +L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENL++ G+IK+ DFG K ++ + GT Y+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-------------GRTWXLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE + G GS+ +V+ K +TG YA+KI+DK+ + K + + E+ + ++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM LE GGE+F + G SE ARFY A++V EY+HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+IK+ADFG K ++ + GT Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-------------GRTWXLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 147/276 (53%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENL++ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G E ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENL++ G+IK+ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K +TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K +TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 199
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 259
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 260 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 295
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K +TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G E ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G E ARFY A++V EY+HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K +TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 227
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 287
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 288 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G E ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 148/281 (52%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 175
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + T GT
Sbjct: 176 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA-------------TWTLCGT 222
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 282
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 283 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +YQM +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K ++TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P + +L F+F+D +LYM +E GGE+F + G E ARFY A++V EY+HS
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENL++ G+IK+ DFG K ++ + GT Y+
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-------------GRTWXLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 147/289 (50%), Gaps = 13/289 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
++ +FE K+ G G++ KV+ K+ TG YA+KI+ K+ I +++ A+ E VL
Sbjct: 6 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 65
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP + L ++FQ L +E GGELF ++ + SED ARFY AE+V AL+Y+H
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 163 S-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +++RD+K ENL+L DGHIKI DFG K T+ F GT Y
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK----------XFCGTPEY 175
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 235
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI--RGQTPP 328
P R G G + H FF GI W+++ + +PP
Sbjct: 236 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 284
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 147/289 (50%), Gaps = 13/289 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
++ +FE K+ G G++ KV+ K+ TG YA+KI+ K+ I +++ A+ E VL
Sbjct: 7 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP + L ++FQ L +E GGELF ++ + SED ARFY AE+V AL+Y+H
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 163 S-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +++RD+K ENL+L DGHIKI DFG K T+ F GT Y
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK----------XFCGTPEY 176
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 236
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI--RGQTPP 328
P R G G + H FF GI W+++ + +PP
Sbjct: 237 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 285
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 147/289 (50%), Gaps = 13/289 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
++ +FE K+ G G++ KV+ K+ TG YA+KI+ K+ I +++ A+ E VL
Sbjct: 8 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP + L ++FQ L +E GGELF ++ + SED ARFY AE+V AL+Y+H
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 163 S-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +++RD+K ENL+L DGHIKI DFG K T+ F GT Y
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK----------XFCGTPEY 177
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+ PEVL + D W LG +Y+M+ G PF + +F+ I+ +IRFP
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE 237
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI--RGQTPP 328
P R G G + H FF GI W+++ + +PP
Sbjct: 238 AKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 286
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K +TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G E ARFY A++V EY+HS
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 199
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 259
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 260 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 295
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K +TG YA+KI+DK+ + K + + E+ +L ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 207
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 267
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G + H +F DW
Sbjct: 268 DLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDW 303
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLAGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 174 bits (440), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 36 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 202
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 262
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 263 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 174 bits (440), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 146/277 (52%), Gaps = 13/277 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
+ F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +L +
Sbjct: 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
+ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
S+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLXGTPEYL 205
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXX 282
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 265
Query: 283 XXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 146/277 (52%), Gaps = 13/277 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
+ F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +L +
Sbjct: 26 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 85
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
+ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V EY+H
Sbjct: 86 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 145
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
S+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYL 192
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXX 282
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 252
Query: 283 XXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 253 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 289
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K +TG +A+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L ++F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 20/300 (6%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFITKENKTA-YVKLE 95
E I++FEL K+ G G+Y KV +KI DTG +YA+K++ K I ++ KT + + E
Sbjct: 49 EKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTE 108
Query: 96 RIVLDQLDH-PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
R VL+ + P +V L + FQ L++ L+ GGELF ++ + +E E + Y E+
Sbjct: 109 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEI 168
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
V ALE++H +G+I+RDIK EN+LL ++GH+ + DFG K A ++A
Sbjct: 169 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV---------ADETERAYD 219
Query: 215 FVGTAAYVPPEVLNSSPATFGN--DLWALGCTLYQMLSGTSPF----KDTSEWLIFQRII 268
F GT Y+ P+++ + D W+LG +Y++L+G SPF + S+ I +RI+
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279
Query: 269 ARDIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPP 328
+ +P S P R G GP +K H FF+ I+W ++ + P
Sbjct: 280 KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVP 339
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K +TG +A+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L ++F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENL++ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 146/276 (52%), Gaps = 13/276 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ FE K G GS+ +V+ K +TG +A+KI+DK+ + K + + E+ +L ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L ++F+D +LYM +E GGE+F + G SE ARFY A++V EY+HS
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYLA 206
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXX 283
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK 266
Query: 284 XXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 267 DLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 147/281 (52%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G +E ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 145/277 (52%), Gaps = 13/277 (4%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
+ F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +L +
Sbjct: 34 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 93
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
+ P +V+L F+F+D +LYM +E GGE+F + G E ARFY A++V EY+H
Sbjct: 94 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 153
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
S+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT Y+
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGTPEYL 200
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXX 282
PE++ S D WALG +Y+M +G PF I+++I++ +RFP++FS
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDL 260
Query: 283 XXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
+ R G G +K H +F DW
Sbjct: 261 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 297
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 146/281 (51%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 56 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G E ARFY A++V
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 175
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 176 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 222
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 282
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 283 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 146/281 (51%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G E ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 146/281 (51%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G E ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 146/281 (51%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G E ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 146/281 (51%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ P ++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 146/281 (51%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDW 302
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 146/281 (51%), Gaps = 13/281 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q + F+ K G GS+ +V+ K ++G YA+KI+DK+ + K + + E+ +
Sbjct: 35 QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L ++ P +V+L F+F+D +LYM +E GGE+F + G SE ARFY A++V
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS+ LI+RD+KPENLL+ G+I++ DFG K ++ + GT
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-------------GRTWXLCGT 201
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
+ PE++ S D WALG +Y+M +G PF I+++I++ +RFP++F
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF 261
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW 319
S + R G G +K H +F DW
Sbjct: 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 149/291 (51%), Gaps = 14/291 (4%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD- 100
I +FE ++ G GS+ KV+ A+ +TG +YA+K++ K I +++ E+ +L
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
+HP + +LF FQ L+ +E GG+L I E ARFY AE++ AL +
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
+H G+I+RD+K +N+LL +GH K+ADFG K + +T TF GT
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT----------TATFCGTPD 189
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSX 280
Y+ PE+L D WA+G LY+ML G +PF+ +E +F+ I+ ++ +P +
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
Query: 281 XXXXXXXXXXXXXPSGRPGA-GPGGYAVLKMHPFFKGIDWK--NIRGQTPP 328
P+ R G+ GG + HPFFK IDW N R PP
Sbjct: 250 DATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPP 300
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 159/311 (51%), Gaps = 19/311 (6%)
Query: 27 VQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE 86
++ +K F + Q +DFE+ K+ G G++ +V K + V+A+KI++K + K
Sbjct: 56 LEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKR 115
Query: 87 NKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSED 145
+TA + ER VL D + L + FQD +LY+ ++ GG+L ++ + L E+
Sbjct: 116 AETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEE 175
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGS-VKPMQDSRITVLP 204
ARFY AE+V A++ +H + +HRDIKP+N+L+ +GHI++ADFGS +K M+D +
Sbjct: 176 MARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV---- 231
Query: 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGN-----DLWALGCTLYQMLSGTSPFKDTS 259
++ VGT Y+ PE+L + G D W+LG +Y+ML G +PF S
Sbjct: 232 ------QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285
Query: 260 EWLIFQRIIARDIR--FPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
+ +I+ R FP + S G G K HPFF GI
Sbjct: 286 LVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345
Query: 318 DWKNIRGQTPP 328
DW NIR P
Sbjct: 346 DWDNIRNCEAP 356
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 159/310 (51%), Gaps = 17/310 (5%)
Query: 27 VQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE 86
++ +K F + +DFE+ K+ G G++ +V K +T +YA+KI++K + K
Sbjct: 56 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 115
Query: 87 NKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSED 145
+TA + ER VL D + L + FQD LY+ ++ GG+L ++ + L ED
Sbjct: 116 AETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED 175
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
ARFY E+V A++ IH + +HRDIKP+N+LL +GHI++ADFGS M D TV +
Sbjct: 176 MARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG-TVQSS 234
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGN-----DLWALGCTLYQMLSGTSPFKDTSE 260
A VGT Y+ PE+L + G D W+LG +Y+ML G +PF S
Sbjct: 235 VA--------VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 286
Query: 261 WLIFQRIIARDIR--FPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGID 318
+ +I+ + R FP++ + S G G K H FF+G++
Sbjct: 287 VETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLN 346
Query: 319 WKNIRGQTPP 328
W+NIR P
Sbjct: 347 WENIRNLEAP 356
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 159/310 (51%), Gaps = 17/310 (5%)
Query: 27 VQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE 86
++ +K F + +DFE+ K+ G G++ +V K +T +YA+KI++K + K
Sbjct: 72 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 131
Query: 87 NKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSED 145
+TA + ER VL D + L + FQD LY+ ++ GG+L ++ + L ED
Sbjct: 132 AETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED 191
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
ARFY E+V A++ IH + +HRDIKP+N+LL +GHI++ADFGS M D TV +
Sbjct: 192 MARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG-TVQSS 250
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGN-----DLWALGCTLYQMLSGTSPFKDTSE 260
A VGT Y+ PE+L + G D W+LG +Y+ML G +PF S
Sbjct: 251 VA--------VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL 302
Query: 261 WLIFQRIIARDIR--FPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGID 318
+ +I+ + R FP++ + S G G K H FF+G++
Sbjct: 303 VETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLN 362
Query: 319 WKNIRGQTPP 328
W+NIR P
Sbjct: 363 WENIRNLEAP 372
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 149/305 (48%), Gaps = 16/305 (5%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVL 99
+ + DF + G GS+ KV+ A + T +YA+KI+ K + +++ +E+ VL
Sbjct: 14 DRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVL 73
Query: 100 DQLDHPG-VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
LD P + +L FQ LY +E GG+L I G E +A FY AE+ L
Sbjct: 74 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGL 133
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
++H G+I+RD+K +N++L ++GHIKIADFG K +T F GT
Sbjct: 134 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTR----------EFCGT 183
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+ PE++ P D WA G LY+ML+G PF E +FQ I+ ++ +P
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSL 243
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG---QTP--PKLASE 333
S P+ R G GP G ++ H FF+ IDW+ + Q P PK+ +
Sbjct: 244 SKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGK 303
Query: 334 PMVNF 338
NF
Sbjct: 304 GAENF 308
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 145/291 (49%), Gaps = 14/291 (4%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER-IVL 99
H DF K+ G GS+ KV+ A+ YA+K++ KK I K+ + ++ ER ++L
Sbjct: 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 100 DQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALE 159
+ HP +V L F+FQ LY L+ GGELF + + E ARFY AE+ AL
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
Y+HS+ +++RD+KPEN+LL + GHI + DFG K N + TF GT
Sbjct: 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK----------ENIEHNSTTSTFCGTP 203
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
Y+ PEVL+ P D W LG LY+ML G PF + ++ I+ + ++ +
Sbjct: 204 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNIT 263
Query: 280 XXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ--TPP 328
+ R GA + +K H FF I+W ++ + TPP
Sbjct: 264 NSARHLLEGLLQKDRTKRLGAK-DDFMEIKSHVFFSLINWDDLINKKITPP 313
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 147/306 (48%), Gaps = 16/306 (5%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
++ + DF + G GS+ KV+ +++ T +YA+KI+ K + +++ +E+ V
Sbjct: 335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 394
Query: 99 LDQLDHPG-VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
L P + +L FQ LY +E GG+L I G E A FY AE+
Sbjct: 395 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG 454
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L ++ S G+I+RD+K +N++L ++GHIKIADFG K +T F G
Sbjct: 455 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK----------XFCG 504
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
T Y+ PE++ P D WA G LY+ML+G +PF+ E +FQ I+ ++ +P
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS 564
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW-----KNIRGQTPPKLAS 332
S P R G GP G +K H FF+ IDW K I+ PK +
Sbjct: 565 MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASG 624
Query: 333 EPMVNF 338
NF
Sbjct: 625 RNAENF 630
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 147/319 (46%), Gaps = 16/319 (5%)
Query: 26 TVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK 85
T F ++ + DF + G GS+ KV+ +++ T +YA+KI+ K + +
Sbjct: 1 TTNTVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ 60
Query: 86 ENKTAYVKLERIVLDQLDHPG-VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSE 144
++ +E+ VL P + +L FQ LY +E GG+L I G E
Sbjct: 61 DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE 120
Query: 145 DEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204
A FY AE+ L ++ S G+I+RD+K +N++L ++GHIKIADFG K
Sbjct: 121 PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK----------E 170
Query: 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIF 264
N F GT Y+ PE++ P D WA G LY+ML+G +PF+ E +F
Sbjct: 171 NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 230
Query: 265 QRIIARDIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDW----- 319
Q I+ ++ +P S P R G GP G +K H FF+ IDW
Sbjct: 231 QSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLER 290
Query: 320 KNIRGQTPPKLASEPMVNF 338
K I+ PK NF
Sbjct: 291 KEIQPPYKPKACGRNAENF 309
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 17/293 (5%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q I+DFEL K+ G GS+ KV A+ T +A+K + K + ++ +E+ V
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 99 LD-QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
L +HP + +F TFQ +L+ +E GG+L I S A FY AE++
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 131
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L+++HS G+++RD+K +N+LL DGHIKIADFG K N D K F G
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK----------ENMLGDAKTNEFCG 181
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
T Y+ PE+L D W+ G LY+ML G SPF E +F I + +P +
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW 241
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT--PP 328
P R G ++ HP F+ I+W+ + + PP
Sbjct: 242 LEKEAKDLLVKLFVREPEKRLGVR----GDIRQHPLFREINWEELERKEIDPP 290
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 19/312 (6%)
Query: 27 VQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE 86
+Q ++ R + DFE+ K+ G G++S+V K TG VYA+KIM+K + K
Sbjct: 43 LQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR 102
Query: 87 NKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH-LSED 145
+ + + ER VL D + +L F FQD LY+ +E GG+L ++ G + +
Sbjct: 103 GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE 162
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
ARFY AE+V A++ +H +G +HRDIKP+N+LL GHI++ADFGS ++
Sbjct: 163 MARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLR--------- 213
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGN-------DLWALGCTLYQMLSGTSPFKDT 258
A ++ VGT Y+ PE+L + G D WALG Y+M G +PF
Sbjct: 214 ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273
Query: 259 SEWLIFQRII--ARDIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKG 316
S + +I+ + P G GG + HPFF G
Sbjct: 274 STAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFG 333
Query: 317 IDWKNIRGQTPP 328
+DW +R PP
Sbjct: 334 LDWDGLRDSVPP 345
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 138/293 (47%), Gaps = 17/293 (5%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
Q I+DF L K+ G GS+ KV A+ T +A+K + K + ++ +E+ V
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 99 LD-QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
L +HP + +F TFQ +L+ +E GG+L I S A FY AE++
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 130
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L+++HS G+++RD+K +N+LL DGHIKIADFG K N D K F G
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK----------ENMLGDAKTNXFCG 180
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
T Y+ PE+L D W+ G LY+ML G SPF E +F I + +P +
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW 240
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT--PP 328
P R G ++ HP F+ I+W+ + + PP
Sbjct: 241 LEKEAKDLLVKLFVREPEKRLGVR----GDIRQHPLFREINWEELERKEIDPP 289
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 150/292 (51%), Gaps = 19/292 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+D+E+ K+ G G++ +V + T VYA+K++ K + K + +A+ ER ++ +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P VV+LF+ FQD LYM +E GG+L + + S + E ARFYTAEVV AL+ IHSM
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G IHRD+KP+N+LL GH+K+ADFG+ M + + T VGT Y+ P
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV---------RCDTAVGTPDYISP 243
Query: 225 EVLNSS--PATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRII--ARDIRFPNYF 278
EVL S +G D W++G LY+ML G +PF S + +I+ + FP+
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD- 302
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGID--WKNIRGQTPP 328
+ G G +K H FFK W+ +R P
Sbjct: 303 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAP 354
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 150/292 (51%), Gaps = 19/292 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+D+E+ K+ G G++ +V + T VYA+K++ K + K + +A+ ER ++ +
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P VV+LF+ FQD LYM +E GG+L + + S + E ARFYTAEVV AL+ IHSM
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSM 187
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G IHRD+KP+N+LL GH+K+ADFG+ M + + T VGT Y+ P
Sbjct: 188 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV---------RCDTAVGTPDYISP 238
Query: 225 EVLNSS--PATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRII--ARDIRFPNYF 278
EVL S +G D W++G LY+ML G +PF S + +I+ + FP+
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD- 297
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGID--WKNIRGQTPP 328
+ G G +K H FFK W+ +R P
Sbjct: 298 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAP 349
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 150/292 (51%), Gaps = 19/292 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+D+E+ K+ G G++ +V + T VYA+K++ K + K + +A+ ER ++ +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P VV+LF+ FQD LYM +E GG+L + + S + E ARFYTAEVV AL+ IHSM
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
G IHRD+KP+N+LL GH+K+ADFG+ M + + T VGT Y+ P
Sbjct: 193 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV---------RCDTAVGTPDYISP 243
Query: 225 EVLNSS--PATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRII--ARDIRFPNYF 278
EVL S +G D W++G LY+ML G +PF S + +I+ + FP+
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD- 302
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGID--WKNIRGQTPP 328
+ G G +K H FFK W+ +R P
Sbjct: 303 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAP 354
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 19/292 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+D+++ K+ G G++ +V + + VYA+K++ K + K + +A+ ER ++ +
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 134
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P VV+LF FQD LYM +E GG+L + + S + E A+FYTAEVV AL+ IHSM
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
GLIHRD+KP+N+LL GH+K+ADFG+ M ++ + T VGT Y+ P
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV---------HCDTAVGTPDYISP 244
Query: 225 EVLNSS--PATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRII--ARDIRFPNYF 278
EVL S +G D W++G L++ML G +PF S + +I+ + FP
Sbjct: 245 EVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED- 303
Query: 279 SXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKG--IDWKNIRGQTPP 328
+ G G +K HPFFK +W NIR P
Sbjct: 304 AEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAP 355
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 133/237 (56%), Gaps = 11/237 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
I+DF++G + G GS++ V RA+ I TG A+K++DKK + K V+ E + QL
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIH 162
HP ++ L+ F+D+ +Y+ LE C GE+ + ++ SE+EAR + +++ + Y+H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
S G++HRD+ NLLLT + +IKIADFG ++ +P+ +K T GT Y+
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK------MPH----EKHYTLCGTPNYI 179
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
PE+ S +D+W+LGC Y +L G PF + +++ D P++ S
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLS 236
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 12/242 (4%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P+ F+I DF++G+ G G + V A++ + ALK++ K + KE ++ E
Sbjct: 7 PKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ L HP ++R++ F D +Y+ LE GEL+ ++ G E + + E+ DA
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA 126
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L Y H +IHRDIKPENLL+ G +KIADFG +V + C G
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFG---------WSVHAPSLRRRXMC---G 174
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
T Y+PPE++ DLW G Y+ L G PF S +RI+ D++FP +
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
Query: 278 FS 279
S
Sbjct: 235 LS 236
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 12/242 (4%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P+ F+I DF++G+ G G + V A++ + ALK++ K + KE ++ E
Sbjct: 8 PKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 67
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ L HP ++R++ F D +Y+ LE GEL+ ++ G E + + E+ DA
Sbjct: 68 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA 127
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L Y H +IHRDIKPENLL+ G +KIADFG +V + C G
Sbjct: 128 LHYCHERKVIHRDIKPENLLMGYKGELKIADFG---------WSVHAPSLRRRXMC---G 175
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
T Y+PPE++ DLW G Y+ L G PF S +RI+ D++FP +
Sbjct: 176 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 235
Query: 278 FS 279
S
Sbjct: 236 LS 237
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 12/265 (4%)
Query: 34 AFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVK 93
A + + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 94 LERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
E + L HP ++RL+ F D +Y+ LE GE++ ++ E Y E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ +AL Y HS +IHRDIKPENLLL + G +KIADFG SR T
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------------ 169
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR 273
T GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI +
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 229
Query: 274 FPNYFSXXXXXXXXXXXXXXPSGRP 298
FP++ + PS RP
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 146/300 (48%), Gaps = 24/300 (8%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
H ++ DF + +I G G + +V +K DTG +YA+K +DKK I + ERI+L
Sbjct: 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 101 QL---DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ D P +V + + F L L+ GG+L ++ G SE + RFY AE++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
LE++H+ +++RD+KP N+LL GH++I+D G L S K VG
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLG------------LACDFSKKKPHASVG 352
Query: 218 TAAYVPPEVLNSSPATFGNDLW-ALGCTLYQMLSGTSPF-----KDTSEWLIFQRIIARD 271
T Y+ PEVL A + W +LGC L+++L G SPF KD E I + +
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMTLTMA 410
Query: 272 IRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT-PPKL 330
+ P+ FS + R G G +K PFF+ +DW+ + Q PP L
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 146/300 (48%), Gaps = 24/300 (8%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
H ++ DF + +I G G + +V +K DTG +YA+K +DKK I + ERI+L
Sbjct: 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 101 QL---DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ D P +V + + F L L+ GG+L ++ G SE + RFY AE++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
LE++H+ +++RD+KP N+LL GH++I+D G L S K VG
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLG------------LACDFSKKKPHASVG 352
Query: 218 TAAYVPPEVLNSSPATFGNDLW-ALGCTLYQMLSGTSPF-----KDTSEWLIFQRIIARD 271
T Y+ PEVL A + W +LGC L+++L G SPF KD E I + +
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMTLTMA 410
Query: 272 IRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT-PPKL 330
+ P+ FS + R G G +K PFF+ +DW+ + Q PP L
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 146/300 (48%), Gaps = 24/300 (8%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
H ++ DF + +I G G + +V +K DTG +YA+K +DKK I + ERI+L
Sbjct: 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 244
Query: 101 QL---DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ D P +V + + F L L+ GG+L ++ G SE + RFY AE++
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
LE++H+ +++RD+KP N+LL GH++I+D G L S K VG
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLG------------LACDFSKKKPHASVG 352
Query: 218 TAAYVPPEVLNSSPATFGNDLW-ALGCTLYQMLSGTSPF-----KDTSEWLIFQRIIARD 271
T Y+ PEVL A + W +LGC L+++L G SPF KD E I + +
Sbjct: 353 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMTLTMA 410
Query: 272 IRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT-PPKL 330
+ P+ FS + R G G +K PFF+ +DW+ + Q PP L
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 146/300 (48%), Gaps = 24/300 (8%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
H ++ DF + +I G G + +V +K DTG +YA+K +DKK I + ERI+L
Sbjct: 184 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLS 243
Query: 101 QL---DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ D P +V + + F L L+ GG+L ++ G SE + RFY AE++
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
LE++H+ +++RD+KP N+LL GH++I+D G L S K VG
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLG------------LACDFSKKKPHASVG 351
Query: 218 TAAYVPPEVLNSSPATFGNDLW-ALGCTLYQMLSGTSPF-----KDTSEWLIFQRIIARD 271
T Y+ PEVL A + W +LGC L+++L G SPF KD E I + +
Sbjct: 352 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMTLTMA 409
Query: 272 IRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT-PPKL 330
+ P+ FS + R G G +K PFF+ +DW+ + Q PP L
Sbjct: 410 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 469
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 127/265 (47%), Gaps = 12/265 (4%)
Query: 34 AFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVK 93
A + + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 94 LERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
E + L HP ++RL+ F D +Y+ LE GE++ ++ E Y E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ +AL Y HS +IHRDIKPENLLL + G +KIADFG SR L
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---------- 171
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR 273
GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI +
Sbjct: 172 --XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 229
Query: 274 FPNYFSXXXXXXXXXXXXXXPSGRP 298
FP++ + PS RP
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 119/242 (49%), Gaps = 12/242 (4%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P+ F+I DF++ + G G + V A++ + ALK++ K + KE ++ E
Sbjct: 7 PKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ L HP ++R++ F D +Y+ LE GEL+ ++ G E + + E+ DA
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA 126
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L Y H +IHRDIKPENLL+ G +KIADFG +V + C G
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFG---------WSVHAPSLRRRXMC---G 174
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
T Y+PPE++ DLW G Y+ L G PF S +RI+ D++FP +
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPF 234
Query: 278 FS 279
S
Sbjct: 235 LS 236
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 127/265 (47%), Gaps = 12/265 (4%)
Query: 34 AFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVK 93
A + + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++
Sbjct: 2 AMESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 94 LERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
E + L HP ++RL+ F D +Y+ LE G ++ ++ E Y E
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ +AL Y HS +IHRDIKPENLLL + G +KIADFG SR T
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------------ 169
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR 273
T GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI +
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 229
Query: 274 FPNYFSXXXXXXXXXXXXXXPSGRP 298
FP++ + PS RP
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 16/281 (5%)
Query: 18 NNSSTNCPTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKI 77
NN + Q+++ + + ++++DFE+G+ G G + V A++ + + ALK+
Sbjct: 11 NNPEEELASKQKNEE----SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKV 66
Query: 78 MDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQIT 137
+ K + K ++ E + L HP ++RL+ F D +Y+ LE G ++ ++
Sbjct: 67 LFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 126
Query: 138 SKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197
E Y E+ +AL Y HS +IHRDIKPENLLL + G +KIADFG
Sbjct: 127 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 186
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
SR T T GT Y+PPE++ DLW+LG Y+ L G PF+
Sbjct: 187 SRRT------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
Query: 258 TSEWLIFQRIIARDIRFPNYFSXXXXXXXXXXXXXXPSGRP 298
+ ++RI + FP++ + PS RP
Sbjct: 235 NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 275
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 16/281 (5%)
Query: 18 NNSSTNCPTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKI 77
NN + Q+++ + + ++++DFE+G+ G G + V A++ + + ALK+
Sbjct: 2 NNPEEELASKQKNEE----SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKV 57
Query: 78 MDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQIT 137
+ K + K ++ E + L HP ++RL+ F D +Y+ LE G ++ ++
Sbjct: 58 LFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 117
Query: 138 SKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197
E Y E+ +AL Y HS +IHRDIKPENLLL + G +KIADFG
Sbjct: 118 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 177
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
SR T T GT Y+PPE++ DLW+LG Y+ L G PF+
Sbjct: 178 SRRT------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 225
Query: 258 TSEWLIFQRIIARDIRFPNYFSXXXXXXXXXXXXXXPSGRP 298
+ ++RI + FP++ + PS RP
Sbjct: 226 NTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 266
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
+ + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 97 IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
+ L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
AL Y HS +IHRDIKPENLLL + G +KIADFG SR T T
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------------TLC 170
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 277 YFSXXXXXXXXXXXXXXPSGRP 298
+ + PS RP
Sbjct: 231 FVTEGARDLISRLLKHNPSQRP 252
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 12/258 (4%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
HS +IHRDIKPENLLL + G +KIADFG SR T T GT
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------------TLCGTLD 171
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSX 280
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++ +
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 281 XXXXXXXXXXXXXPSGRP 298
PS RP
Sbjct: 232 GARDLISRLLKHNPSQRP 249
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 133/246 (54%), Gaps = 17/246 (6%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
A E I ++ L K G G+++KV A+ + TG A+KI+DK T+ N T+ KL R
Sbjct: 7 ATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDK---TQLNPTSLQKLFR 63
Query: 97 IV--LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
V + L+HP +V+LF + +LY+ +E GGE+FD + + G + E EAR ++
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 123
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
V A++Y H ++HRD+K ENLLL D +IKIADFG + TV +K T
Sbjct: 124 VSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGF-----SNEFTV------GNKLDT 172
Query: 215 FVGTAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR 273
F G+ Y PE+ D+W+LG LY ++SG+ PF + + +R++ R
Sbjct: 173 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 232
Query: 274 FPNYFS 279
P Y S
Sbjct: 233 IPFYMS 238
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 6 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 65
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y HS +IHRDIKPENLLL + G +KIADFG SR T T GT
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------------TLCGT 173
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 233
Query: 279 SXXXXXXXXXXXXXXPSGRP 298
+ PS RP
Sbjct: 234 TEGARDLISRLLKHNPSQRP 253
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 12/262 (4%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
+ + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 97 IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
+ L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
AL Y HS +IHRDIKPENLLL + G +KIADFG SR T T
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------------TLC 172
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
GT Y+PPE + DLW+LG Y+ L G PF+ + ++RI + FP+
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 277 YFSXXXXXXXXXXXXXXPSGRP 298
+ + PS RP
Sbjct: 233 FVTEGARDLISRLLKHNPSQRP 254
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 18/282 (6%)
Query: 18 NNSSTNCPTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKI 77
NN + Q+++ + + ++++DFE+G+ G G + V A++ + + ALK+
Sbjct: 11 NNPEEELASKQKNEE----SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKV 66
Query: 78 MDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQIT 137
+ K + K ++ E + L HP ++RL+ F D +Y+ LE G ++ ++
Sbjct: 67 LFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ 126
Query: 138 SKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFG-SVKPMQ 196
E Y E+ +AL Y HS +IHRDIKPENLLL + G +KIADFG SV
Sbjct: 127 KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH--- 183
Query: 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK 256
P++ DD GT Y+PPE++ DLW+LG Y+ L G PF+
Sbjct: 184 ------APSSRRDD----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
Query: 257 DTSEWLIFQRIIARDIRFPNYFSXXXXXXXXXXXXXXPSGRP 298
+ ++RI + FP++ + PS RP
Sbjct: 234 ANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRP 275
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 132/243 (54%), Gaps = 17/243 (6%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV- 98
E I ++ L K G G+++KV A+ I TG A+KI+DK T+ N T+ KL R V
Sbjct: 7 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDK---TQLNPTSLQKLFREVR 63
Query: 99 -LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ L+HP +V+LF + +LY+ +E GGE+FD + + G + E EAR ++V A
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 123
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
++Y H ++HRD+K ENLLL AD +IKIADFG + TV K TF G
Sbjct: 124 VQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF-----SNEFTV------GGKLDTFCG 172
Query: 218 TAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
+ Y PE+ D+W+LG LY ++SG+ PF + + +R++ R P
Sbjct: 173 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 232
Query: 277 YFS 279
Y S
Sbjct: 233 YMS 235
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
+ + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 97 IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
+ L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
AL Y HS +IHRDIKPENLLL + G +KIADFG SR T T
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------------TLC 170
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 277 YFSXXXXXXXXXXXXXXPSGRP 298
+ + PS RP
Sbjct: 231 FVTEGARDLISRLLKHNPSQRP 252
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 1 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 60
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 61 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y HS +IHRDIKPENLLL + G +KIADFG SR T T GT
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------------TLCGT 168
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 228
Query: 279 SXXXXXXXXXXXXXXPSGRP 298
+ PS RP
Sbjct: 229 TEGARDLISRLLKHNPSQRP 248
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 3 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y HS +IHRDIKPENLLL + G +KIADFG SR T T GT
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRT------------TLSGT 170
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 230
Query: 279 SXXXXXXXXXXXXXXPSGRP 298
+ PS RP
Sbjct: 231 TEGARDLISRLLKHNPSQRP 250
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 17/261 (6%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV- 98
E I ++ L K G G+++KV A+ I TG A+KI+DK T+ N ++ KL R V
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK---TQLNSSSLQKLFREVR 65
Query: 99 -LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ L+HP +V+LF + +LY+ +E GGE+FD + + G + E EAR ++V A
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
++Y H ++HRD+K ENLLL AD +IKIADFG +K TF G
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-----------TFGNKLDTFCG 174
Query: 218 TAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
+ Y PE+ D+W+LG LY ++SG+ PF + + +R++ R P
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 234
Query: 277 YFSXXXXXXXXXXXXXXPSGR 297
Y S PS R
Sbjct: 235 YMSTDCENLLKKFLILNPSKR 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 17/261 (6%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV- 98
E I ++ L K G G+++KV A+ I TG A+KI+DK T+ N ++ KL R V
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK---TQLNSSSLQKLFREVR 65
Query: 99 -LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ L+HP +V+LF + +LY+ +E GGE+FD + + G + E EAR ++V A
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
++Y H ++HRD+K ENLLL AD +IKIADFG +K TF G
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-----------TFGNKLDTFCG 174
Query: 218 TAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
+ Y PE+ D+W+LG LY ++SG+ PF + + +R++ R P
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 234
Query: 277 YFSXXXXXXXXXXXXXXPSGR 297
Y S PS R
Sbjct: 235 YMSTDCENLLKKFLILNPSKR 255
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y HS +IHRDIKPENLLL + G +KIADFG SR T L GT
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL------------CGT 169
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 279 SXXXXXXXXXXXXXXPSGRP 298
+ PS RP
Sbjct: 230 TEGARDLISRLLKHNPSQRP 249
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 12/258 (4%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
HS +IHRDIKPENLLL + G +KIADFG SR T L GT
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL------------CGTLD 171
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSX 280
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++ +
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 281 XXXXXXXXXXXXXPSGRP 298
PS RP
Sbjct: 232 GARDLISRLLKHNPSQRP 249
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 14/263 (5%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
+ + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 97 IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
+ L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFG-SVKPMQDSRITVLPNAASDDKACTF 215
AL Y HS +IHRDIKPENLLL + G +KIADFG SV P++ D T
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRD----TL 167
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFP 275
GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP 227
Query: 276 NYFSXXXXXXXXXXXXXXPSGRP 298
++ + PS RP
Sbjct: 228 DFVTEGARDLISRLLKHNPSQRP 250
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 14/259 (5%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL Y
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFG-SVKPMQDSRITVLPNAASDDKACTFVGTA 219
HS +IHRDIKPENLLL + G +KIADFG SV P++ DD GT
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA---------PSSRRDD----LCGTL 173
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++ +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 233
Query: 280 XXXXXXXXXXXXXXPSGRP 298
PS RP
Sbjct: 234 EGARDLISRLLKHNPSQRP 252
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 12/260 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DFE+G+ G G + V A++ ++ + ALK++ K + K ++ E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D+ +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 62 QSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y HS +IHRDIKPENLLL + G +KIADFG SR L GT
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL------------CGT 169
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFV 229
Query: 279 SXXXXXXXXXXXXXXPSGRP 298
+ PS RP
Sbjct: 230 TEGARDLISRLLKHNPSQRP 249
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y HS +IHRDIKPENLLL + G +KIADFG SR T L GT
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL------------CGT 169
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 279 SXXXXXXXXXXXXXXPSGRP 298
+ PS RP
Sbjct: 230 TEGARDLISRLLKHNPSQRP 249
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 5 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y HS +IHRDIKPENLLL + G +KIA+FG SR T T GT
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT------------TLCGT 172
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 232
Query: 279 SXXXXXXXXXXXXXXPSGRP 298
+ PS RP
Sbjct: 233 TEGARDLISRLLKHNPSQRP 252
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
+ + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E
Sbjct: 5 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 64
Query: 97 IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
+ L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +
Sbjct: 65 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
AL Y HS +IHRDIKPENLLL + G +KIADFG SR T L
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL------------C 172
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP+
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 277 YFSXXXXXXXXXXXXXXPSGRP 298
+ + PS RP
Sbjct: 233 FVTEGARDLISRLLKHNPSQRP 254
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
+ + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 97 IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
+ L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
AL Y HS +IHRDIKPENLLL + G +KIA+FG SR T T
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT------------TLC 169
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 229
Query: 277 YFSXXXXXXXXXXXXXXPSGRP 298
+ + PS RP
Sbjct: 230 FVTEGARDLISRLLKHNPSQRP 251
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
+ + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 97 IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
+ L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +
Sbjct: 61 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
AL Y HS +IHRDIKPENLLL + G +KIADFG SR T L
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL------------C 168
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP+
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 228
Query: 277 YFSXXXXXXXXXXXXXXPSGRP 298
+ + PS RP
Sbjct: 229 FVTEGARDLISRLLKHNPSQRP 250
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y HS +IHRDIKPENLLL + G +KIADFG SR T L GT
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL------------CGT 169
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 279 SXXXXXXXXXXXXXXPSGRP 298
+ PS RP
Sbjct: 230 TEGARDLISRLLKHNPSQRP 249
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 123/257 (47%), Gaps = 12/257 (4%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
++++DFE+G+ G G + V A++ + ALK++ K + K ++ E +
Sbjct: 2 WALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 61
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL Y
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 121
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
HS +IHRDIKPENLLL + G +KIADFG SR T T GT Y
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT------------TLCGTLDY 169
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++ +
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 229
Query: 282 XXXXXXXXXXXXPSGRP 298
PS RP
Sbjct: 230 ARDLISRLLKHNPSQRP 246
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 17/261 (6%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV- 98
E I ++ L K G G+++KV A+ I TG A++I+DK T+ N ++ KL R V
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDK---TQLNSSSLQKLFREVR 65
Query: 99 -LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ L+HP +V+LF + +LY+ +E GGE+FD + + G + E EAR ++V A
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
++Y H ++HRD+K ENLLL AD +IKIADFG +K TF G
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-----------TFGNKLDTFCG 174
Query: 218 TAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
+ Y PE+ D+W+LG LY ++SG+ PF + + +R++ R P
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 234
Query: 277 YFSXXXXXXXXXXXXXXPSGR 297
Y S PS R
Sbjct: 235 YMSTDCENLLKKFLILNPSKR 255
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 123/258 (47%), Gaps = 12/258 (4%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL Y
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
HS +IHRDIKPENLLL + G +KIADFG SR L GT
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL------------CGTLD 174
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSX 280
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++ +
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 281 XXXXXXXXXXXXXPSGRP 298
PS RP
Sbjct: 235 GARDLISRLLKHNPSQRP 252
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 132/259 (50%), Gaps = 17/259 (6%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV--L 99
I ++ L K G G+++KV A+ I TG A+KI+DK T+ N ++ KL R V +
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK---TQLNSSSLQKLFREVRIM 60
Query: 100 DQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALE 159
L+HP +V+LF + +LY+ +E GGE+FD + + G + E EAR ++V A++
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ 120
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
Y H ++HRD+K ENLLL AD +IKIADFG +K TF G+
Sbjct: 121 YCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-----------TFGNKLDTFCGSP 169
Query: 220 AYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y PE+ D+W+LG LY ++SG+ PF + + +R++ R P Y
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 229
Query: 279 SXXXXXXXXXXXXXXPSGR 297
S PS R
Sbjct: 230 STDCENLLKKFLILNPSKR 248
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 14/261 (5%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFG-SVKPMQDSRITVLPNAASDDKACTFVG 217
Y HS +IHRDIKPENLLL + G +KIADFG SV A + G
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH-------------APSSRRAALCG 168
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
T Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 228
Query: 278 FSXXXXXXXXXXXXXXPSGRP 298
+ PS RP
Sbjct: 229 VTEGARDLISRLLKHNPSQRP 249
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 125/262 (47%), Gaps = 12/262 (4%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
+ + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E
Sbjct: 2 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 61
Query: 97 IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
+ L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +
Sbjct: 62 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
AL Y HS +IHRDIKPENLLL + G +KIADFG SR L
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL------------C 169
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP+
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 229
Query: 277 YFSXXXXXXXXXXXXXXPSGRP 298
+ + PS RP
Sbjct: 230 FVTEGARDLISRLLKHNPSQRP 251
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 130/243 (53%), Gaps = 17/243 (6%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV- 98
E I ++ L K G G+++KV A+ I TG A+KI+DK T+ N T+ KL R V
Sbjct: 10 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDK---TQLNPTSLQKLFREVR 66
Query: 99 -LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ L+HP +V+LF + +LY+ +E GGE+FD + + G + E EAR ++V A
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 126
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
++Y H ++HRD+K ENLLL AD +IKIADFG + TV K F G
Sbjct: 127 VQYCHQKRIVHRDLKAENLLLDADMNIKIADFGF-----SNEFTV------GGKLDAFCG 175
Query: 218 TAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y PE+ D+W+LG LY ++SG+ PF + + +R++ R P
Sbjct: 176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 235
Query: 277 YFS 279
Y S
Sbjct: 236 YMS 238
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 12/260 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y HS +IHRDIKPENLLL + G +KIADFG SR L GT
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL------------CGT 169
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 279 SXXXXXXXXXXXXXXPSGRP 298
+ PS RP
Sbjct: 230 TEGARDLISRLLKHNPSQRP 249
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 125/262 (47%), Gaps = 12/262 (4%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
+ + ++++DFE+G+ G G + V A++ + + ALK++ K + K ++ E
Sbjct: 3 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 97 IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
+ L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
AL Y HS +IHRDIKPENLLL + G +KIADFG SR L
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL------------C 170
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
GT Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 230
Query: 277 YFSXXXXXXXXXXXXXXPSGRP 298
+ + PS RP
Sbjct: 231 FVTEGARDLISRLLKHNPSQRP 252
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 131/261 (50%), Gaps = 17/261 (6%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV- 98
E I ++ L K G G+++KV A+ I TG A+KI+DK T+ N ++ KL R V
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK---TQLNSSSLQKLFREVR 65
Query: 99 -LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ L+HP +V+LF + +LY+ +E GGE+FD + + G + E EAR ++V A
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
++Y H ++HRD+K ENLLL AD +IKIADFG +K F G
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-----------TFGNKLDAFCG 174
Query: 218 TAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y PE+ D+W+LG LY ++SG+ PF + + +R++ R P
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 234
Query: 277 YFSXXXXXXXXXXXXXXPSGR 297
Y S PS R
Sbjct: 235 YMSTDCENLLKKFLILNPSKR 255
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 121/235 (51%), Gaps = 14/235 (5%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+EL + G G ++KV A I TG + A+KIMDK T + +K E L L H
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKN--TLGSDLPRIKTEIEALKNLRHQH 69
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+ +L+ + ++M LE C GGELFD I S+ LSE+E R ++V A+ Y+HS G
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGY 129
Query: 167 IHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV 226
HRD+KPENLL +K+ DFG + P D T G+ AY PE+
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFG---------LCAKPKGNKDYHLQTCCGSLAYAAPEL 180
Query: 227 LNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
+ + G+ D+W++G LY ++ G PF D + ++++I+ P + S
Sbjct: 181 IQGK-SYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLS 234
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 128/231 (55%), Gaps = 16/231 (6%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
FE + G G++S+VV A++ TG ++A+K + KK + + K + ++ E VL ++ H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--KGKESSIENEIAVLRKIKHEN 81
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+V L ++ LY+ ++ GGELFD+I KG +E +A +V+DA+ Y+H MG+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 167 IHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+HRD+KPENLL + + I I+DFG K M+ D T GT YV
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSK-ME----------GKGDVMSTACGTPGYVA 190
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF 274
PEVL P + D W++G Y +L G PF D ++ +F++I+ + F
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEF 241
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 132/261 (50%), Gaps = 17/261 (6%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV- 98
E I ++ L K G G+++KV A+ I TG A++I+DK T+ N ++ KL R V
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDK---TQLNSSSLQKLFREVR 65
Query: 99 -LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ L+HP +V+LF + +LY+ +E GGE+FD + + G + E EAR ++V A
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
++Y H ++HRD+K ENLLL AD +IKIADFG +K F G
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEF-----------TFGNKLDEFCG 174
Query: 218 TAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
+ Y PE+ D+W+LG LY ++SG+ PF + + +R++ R P
Sbjct: 175 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 234
Query: 277 YFSXXXXXXXXXXXXXXPSGR 297
Y S PS R
Sbjct: 235 YMSTDCENLLKKFLILNPSKR 255
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 12/241 (4%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DF++G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y HS +IHRDIKPENLLL ++G +KIADFG SR T T GT
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT------------TLCGT 173
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278
Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFV 233
Query: 279 S 279
+
Sbjct: 234 T 234
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 120/236 (50%), Gaps = 14/236 (5%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
HF+I DFE+G+ G G + V A++ + + ALK++ K I KE ++ E +
Sbjct: 19 HFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQA 78
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
L HP ++RL+ F D +Y+ LE GEL+ ++ E E+ DAL Y
Sbjct: 79 HLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMY 138
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFG-SVKPMQDSRITVLPNAASDDKACTFVGTA 219
H +IHRDIKPENLLL G +KIADFG SV A + T GT
Sbjct: 139 CHGKKVIHRDIKPENLLLGLKGELKIADFGWSVH-------------APSLRRKTMCGTL 185
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFP 275
Y+PPE++ DLW +G Y++L G PF+ S ++RI+ D++FP
Sbjct: 186 DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP 241
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 129/231 (55%), Gaps = 16/231 (6%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ + G G++S+V+ A+ T + A+K + KK + E K ++ E VL ++ HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIAVLHKIKHPN 77
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+V L ++ LY+ ++ GGELFD+I KG +E +A +V+DA++Y+H +G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 167 IHRDIKPENLL---LTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+HRD+KPENLL L D I I+DFG K M+D +VL A GT YV
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG-SVLSTAC---------GTPGYVA 186
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF 274
PEVL P + D W++G Y +L G PF D ++ +F++I+ + F
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 125/242 (51%), Gaps = 14/242 (5%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV 98
+ ++++DF++G+ G G + V A++ + + ALK++ K + K ++ E +
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L HP ++RL+ F D +Y+ LE G ++ ++ E Y E+ +AL
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFG-SVKPMQDSRITVLPNAASDDKACTFVG 217
Y HS +IHRDIKPENLLL ++G +KIADFG SV P++ D T G
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHA---------PSSRRD----TLCG 172
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
T Y+PPE++ DLW+LG Y+ L G PF+ + ++RI + FP++
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDF 232
Query: 278 FS 279
+
Sbjct: 233 VT 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 14/219 (6%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVL 99
E + FE+ + G GS+ KV +K DT +YA+K M+K+ + N+ V E ++
Sbjct: 10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIM 69
Query: 100 DQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALE 159
L+HP +V L+++FQD ++M ++ GG+L + H E+ + + E+V AL+
Sbjct: 70 QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD 129
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
Y+ + +IHRD+KP+N+LL GH+ I DF +LP + T GT
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA--------AMLPRET---QITTMAGTK 178
Query: 220 AYVPPEVLNSSPA---TFGNDLWALGCTLYQMLSGTSPF 255
Y+ PE+ +S +F D W+LG T Y++L G P+
Sbjct: 179 PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 129/231 (55%), Gaps = 16/231 (6%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ + G G++S+V+ A+ T + A+K + K+ + E K ++ E VL ++ HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPN 77
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+V L ++ LY+ ++ GGELFD+I KG +E +A +V+DA++Y+H +G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 167 IHRDIKPENLL---LTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+HRD+KPENLL L D I I+DFG K M+D +VL A GT YV
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG-SVLSTAC---------GTPGYVA 186
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF 274
PEVL P + D W++G Y +L G PF D ++ +F++I+ + F
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 129/231 (55%), Gaps = 16/231 (6%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ + G G++S+V+ A+ T + A+K + K+ + E K ++ E VL ++ HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPN 77
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+V L ++ LY+ ++ GGELFD+I KG +E +A +V+DA++Y+H +G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 167 IHRDIKPENLL---LTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+HRD+KPENLL L D I I+DFG K M+D +VL A GT YV
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG-SVLSTAC---------GTPGYVA 186
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF 274
PEVL P + D W++G Y +L G PF D ++ +F++I+ + F
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 129/231 (55%), Gaps = 16/231 (6%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ + G G++S+V+ A+ T + A+K + K+ + E K ++ E VL ++ HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPN 77
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+V L ++ LY+ ++ GGELFD+I KG +E +A +V+DA++Y+H +G+
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 167 IHRDIKPENLL---LTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+HRD+KPENLL L D I I+DFG K M+D +VL A GT YV
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK-MEDPG-SVLSTAC---------GTPGYVA 186
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF 274
PEVL P + D W++G Y +L G PF D ++ +F++I+ + F
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 128/261 (49%), Gaps = 17/261 (6%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV- 98
E I ++ L K G G+++KV A+ I TG A+KI+DK T+ N ++ KL R V
Sbjct: 9 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK---TQLNSSSLQKLFREVR 65
Query: 99 -LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
L+HP +V+LF + +LY+ E GGE+FD + + G E EAR ++V A
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSA 125
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
++Y H ++HRD+K ENLLL AD +IKIADFG +K F G
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEF-----------TFGNKLDAFCG 174
Query: 218 TAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y PE+ D+W+LG LY ++SG+ PF + + +R++ R P
Sbjct: 175 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF 234
Query: 277 YFSXXXXXXXXXXXXXXPSGR 297
Y S PS R
Sbjct: 235 YXSTDCENLLKKFLILNPSKR 255
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 120/221 (54%), Gaps = 20/221 (9%)
Query: 52 IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLF 111
+ G GS+ +V++ K T YA+K+++K K T+ + E +L +LDHP +++LF
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 112 FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDI 171
+D+ S Y+ E GGELFD+I + SE +A +V + Y+H ++HRD+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 172 KPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLN 228
KPEN+LL + D IKI DFG Q N D+ +GTA Y+ PEVL
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQ-------QNTKMKDR----IGTAYYIAPEVLR 196
Query: 229 SSPATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
T+ D+W+ G LY +LSGT PF +E+ I +R+
Sbjct: 197 ---GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 11/236 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
I ++++ K G GS+ KV A TG ALKI++KK + K + ++ E L L
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +++L+ + + M +E G ELFD I + +SE EAR + +++ A+EY H
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
++HRD+KPENLLL ++KIADFG M D + + A + Y
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 190
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
PEV D+W+ G LY ML PF D S ++F+ I P + S
Sbjct: 191 PEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLS 236
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 11/236 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
I ++++ K G GS+ KV A TG ALKI++KK + K + ++ E L L
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +++L+ + + M +E G ELFD I + +SE EAR + +++ A+EY H
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
++HRD+KPENLLL ++KIADFG M D + + A + Y
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 191
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
PEV D+W+ G LY ML PF D S ++F+ I P + S
Sbjct: 192 PEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLS 237
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 122/222 (54%), Gaps = 19/222 (8%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
++ G GS+ +V+ K TG A+K++ K+ + ++ + E +L QLDHP +++L
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
+ F+D Y+ E GGELFD+I S+ SE +A +V+ + Y+H ++HRD
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 175
Query: 171 IKPENLLL---TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
+KPENLLL + D +I+I DFG + S+ K +GTA Y+ PEVL
Sbjct: 176 LKPENLLLESKSKDANIRIIDFGLSTHFEASK-----------KMKDKIGTAYYIAPEVL 224
Query: 228 NSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
+ T+ D+W+ G LY +LSG PF +E+ I +++
Sbjct: 225 H---GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 263
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 16/217 (7%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS+ +V++ K T YA+K+++K K T+ + E +L +LDHP +++LF
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+D+ S Y+ E GGELFD+I + SE +A +V + Y+H ++HRD+KP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 174 ENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230
EN+LL + D IKI DFG Q N D+ +GTA Y+ PEVL +
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQ-------NTKMKDR----IGTAYYIAPEVLRGT 198
Query: 231 PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
D+W+ G LY +LSGT PF +E+ I +R+
Sbjct: 199 YDE-KCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 11/236 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
I ++++ K G GS+ KV A TG ALKI++KK + K + ++ E L L
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +++L+ + + M +E G ELFD I + +SE EAR + +++ A+EY H
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
++HRD+KPENLLL ++KIADFG M D + + A + Y
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
PEV D+W+ G LY ML PF D S ++F+ I P + S
Sbjct: 182 PEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLS 227
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 16/217 (7%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS+ +V++ K T YA+K+++K K T+ + E +L +LDHP +++LF
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+D+ S Y+ E GGELFD+I + SE +A +V + Y+H ++HRD+KP
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKP 149
Query: 174 ENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230
EN+LL + D IKI DFG Q N D+ +GTA Y+ PEVL +
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQ-------NTKMKDR----IGTAYYIAPEVLRGT 198
Query: 231 PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
D+W+ G LY +LSGT PF +E+ I +R+
Sbjct: 199 YDE-KCDVWSAGVILYILLSGTPPFYGKNEYDILKRV 234
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 122/222 (54%), Gaps = 19/222 (8%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
++ G GS+ +V+ K TG A+K++ K+ + ++ + E +L QLDHP +++L
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
+ F+D Y+ E GGELFD+I S+ SE +A +V+ + Y+H ++HRD
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 174
Query: 171 IKPENLLL---TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
+KPENLLL + D +I+I DFG + S+ K +GTA Y+ PEVL
Sbjct: 175 LKPENLLLESKSKDANIRIIDFGLSTHFEASK-----------KMKDKIGTAYYIAPEVL 223
Query: 228 NSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
+ T+ D+W+ G LY +LSG PF +E+ I +++
Sbjct: 224 H---GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 262
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 15/220 (6%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
++ G GS+ +V+ K TG A+K++ K+ + ++ + E +L QLDHP +++L
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
+ F+D Y+ E GGELFD+I S+ SE +A +V+ + Y+H ++HRD
Sbjct: 98 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 157
Query: 171 IKPENLLL---TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
+KPENLLL + D +I+I DFG + S+ K +GTA Y+ PEVL
Sbjct: 158 LKPENLLLESKSKDANIRIIDFGLSTHFEASK-----------KMKDKIGTAYYIAPEVL 206
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
+ + D+W+ G LY +LSG PF +E+ I +++
Sbjct: 207 HGTYDE-KCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 11/236 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
I ++++ K G GS+ KV A TG ALKI++KK + K + ++ E L L
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +++L+ + + M +E G ELFD I + +SE EAR + +++ A+EY H
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
++HRD+KPENLLL ++KIADFG M D + + A + Y
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 185
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
PEV D+W+ G LY ML PF D S ++F+ I P + S
Sbjct: 186 PEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLS 231
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 122/222 (54%), Gaps = 19/222 (8%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
++ G GS+ +V+ K TG A+K++ K+ + ++ + E +L QLDHP +++L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
+ F+D Y+ E GGELFD+I S+ SE +A +V+ + Y+H ++HRD
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 151
Query: 171 IKPENLLL---TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
+KPENLLL + D +I+I DFG + S+ K +GTA Y+ PEVL
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFEASK-----------KMKDKIGTAYYIAPEVL 200
Query: 228 NSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
+ T+ D+W+ G LY +LSG PF +E+ I +++
Sbjct: 201 H---GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 20/237 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER--IVLDQLD 103
+++L + G G++S V R KI TG YA KI++ K ++ + + KLER + L
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD---HQKLEREARICRLLK 61
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +VRL + + Y+ + GGELF+ I ++ + SE +A ++++++ + H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 164 MGLIHRDIKPENLLLTADGH---IKIADFGSVKPMQDSRITVLPNAASDDKAC-TFVGTA 219
G++HRD+KPENLLL + +K+ADFG +Q D +A F GT
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ-----------GDQQAWFGFAGTP 170
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y+ PEVL P D+WA G LY +L G PF D + ++Q+I A FP+
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS 227
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 126/237 (53%), Gaps = 20/237 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER--IVLDQLD 103
+++L + G G++S V R KI TG YA KI++ K ++ + + KLER + L
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARD---HQKLEREARICRLLK 61
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +VRL + + Y+ + GGELF+ I ++ + SE +A ++++++ + H
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 164 MGLIHRDIKPENLLLTADGH---IKIADFGSVKPMQDSRITVLPNAASDDKAC-TFVGTA 219
G++HRD+KPENLLL + +K+ADFG +Q D +A F GT
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ-----------GDQQAWFGFAGTP 170
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y+ PEVL P D+WA G LY +L G PF D + ++Q+I A FP+
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS 227
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 136/289 (47%), Gaps = 56/289 (19%)
Query: 16 GNNNSSTNCPTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYAL 75
G++ SS +C + + ++++D E+GK GSY V A + T YA+
Sbjct: 1 GSSGSSGDCVQLNQ------------YTLKD-EIGK----GSYGVVKLAYNENDNTYYAM 43
Query: 76 KIMDKKFITKE-----------------------NKTAYVKLERIVLDQLDHPGVVRLFF 112
K++ KK + ++ V E +L +LDHP VV+L
Sbjct: 44 KVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVE 103
Query: 113 TFQDTFS--LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
D LYM E G + + T K LSED+ARFY +++ +EY+H +IHRD
Sbjct: 104 VLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQARFYFQDLIKGIEYLHYQKIIHRD 162
Query: 171 IKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230
IKP NLL+ DGHIKIADFG + SD VGT A++ PE L+ +
Sbjct: 163 IKPSNLLVGEDGHIKIADFGVSNEFK----------GSDALLSNTVGTPAFMAPESLSET 212
Query: 231 PATFGN---DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
F D+WA+G TLY + G PF D + +I ++ + FP+
Sbjct: 213 RKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD 261
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 19/222 (8%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
++ G GS+ +V+ K TG A+K++ K+ + ++ + E +L QLDHP + +L
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
+ F+D Y+ E GGELFD+I S+ SE +A +V+ + Y H ++HRD
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRD 151
Query: 171 IKPENLLL---TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
+KPENLLL + D +I+I DFG + S+ K +GTA Y+ PEVL
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFEASK-----------KXKDKIGTAYYIAPEVL 200
Query: 228 NSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
+ T+ D+W+ G LY +LSG PF +E+ I +++
Sbjct: 201 H---GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 123/235 (52%), Gaps = 18/235 (7%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER--IVLDQLDH 104
++L + G G++S V R K+ G YA KI++ K ++ + + KLER + L H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARD---HQKLEREARICRLLKH 80
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P +VRL + + Y+ + GGELF+ I ++ + SE +A ++++A+ + H M
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 165 GLIHRDIKPENLLLTAD---GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
G++HRD+KPENLLL + +K+ADFG ++ + F GT Y
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF----------GFAGTPGY 190
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
+ PEVL P DLWA G LY +L G PF D + ++Q+I A FP+
Sbjct: 191 LSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS 245
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 113/236 (47%), Gaps = 10/236 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
I + LG GVG++ KV + TG A+KI++++ I + +K E L
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +++L+ +M +E GGELFD I G + E EAR +++ A++Y H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
++HRD+KPEN+LL A + KIADFG M D + + A + Y
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 189
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
PEV D+W+ G LY +L GT PF D +F++I P Y +
Sbjct: 190 PEV----------DIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 235
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 125/236 (52%), Gaps = 19/236 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER--IVLDQLD 103
++++ + G G++S V R TG +A KI++ K ++ + + KLER + +L
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD---FQKLEREARICRKLQ 86
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +VRL + Q+ Y+ + GGELF+ I ++ SE +A ++++++ Y HS
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 164 MGLIHRDIKPENLLLTADGH---IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
G++HR++KPENLLL + +K+ADFG + DS + F GT
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-----------EAWHGFAGTPG 195
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y+ PEVL P + D+WA G LY +L G PF D + ++ +I A +P+
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS 251
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 125/236 (52%), Gaps = 19/236 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER--IVLDQLD 103
++++ + G G++S V R TG +A KI++ K ++ + + KLER + +L
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD---FQKLEREARICRKLQ 63
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +VRL + Q+ Y+ + GGELF+ I ++ SE +A ++++++ Y HS
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 164 MGLIHRDIKPENLLLTADGH---IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
G++HR++KPENLLL + +K+ADFG + DS + F GT
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-----------EAWHGFAGTPG 172
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y+ PEVL P + D+WA G LY +L G PF D + ++ +I A +P+
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS 228
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 125/236 (52%), Gaps = 19/236 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER--IVLDQLD 103
++++ + G G++S V R TG +A KI++ K ++ + + KLER + +L
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD---FQKLEREARICRKLQ 63
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +VRL + Q+ Y+ + GGELF+ I ++ SE +A ++++++ Y HS
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 164 MGLIHRDIKPENLLLTADGH---IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
G++HR++KPENLLL + +K+ADFG + DS + F GT
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-----------EAWHGFAGTPG 172
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y+ PEVL P + D+WA G LY +L G PF D + ++ +I A +P+
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS 228
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 113/236 (47%), Gaps = 10/236 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
I + LG GVG++ KV + TG A+KI++++ I + +K E L
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +++L+ +M +E GGELFD I G + E EAR +++ A++Y H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
++HRD+KPEN+LL A + KIADFG M D + + A + Y
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAG 189
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
PEV D+W+ G LY +L GT PF D +F++I P Y +
Sbjct: 190 PEV----------DIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLN 235
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 125/236 (52%), Gaps = 19/236 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER--IVLDQLD 103
++++ + G G++S V R TG +A KI++ K ++ + + KLER + +L
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD---FQKLEREARICRKLQ 62
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +VRL + Q+ Y+ + GGELF+ I ++ SE +A ++++++ Y HS
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 164 MGLIHRDIKPENLLLTADGH---IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
G++HR++KPENLLL + +K+ADFG + DS + F GT
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-----------EAWHGFAGTPG 171
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y+ PEVL P + D+WA G LY +L G PF D + ++ +I A +P+
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS 227
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 15/220 (6%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
K G G+Y +V+ K TG A+KI+ K +T + + + E VL QLDHP +++L
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
+ F+D + Y+ +E GGELFD+I + SE +A +V+ Y+H ++HRD
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD 146
Query: 171 IKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
+KPENLLL + D IKI DFG + + K +GTA Y+ PEVL
Sbjct: 147 LKPENLLLESKSRDALIKIVDFG-----------LSAHFEVGGKMKERLGTAYYIAPEVL 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
D+W+ G LY +L G PF ++ I +R+
Sbjct: 196 RKKYDE-KCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 124/237 (52%), Gaps = 18/237 (7%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER--IVLDQL 102
++++L + G G++S V R K+ G YA I++ K ++ + + KLER + L
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARD---HQKLEREARICRLL 67
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +VRL + + Y+ + GGELF+ I ++ + SE +A ++++A+ + H
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 163 SMGLIHRDIKPENLLLTAD---GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
MG++HR++KPENLLL + +K+ADFG ++ + F GT
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWF----------GFAGTP 177
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y+ PEVL P DLWA G LY +L G PF D + ++Q+I A FP+
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 18/276 (6%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
+++ + G+ G G ++K +DT V+A K++ K + K ++ + E + L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
D+P VV F+D +Y+ LE C L + + ++E EAR++ + + ++Y+H
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
+ +IHRD+K NL L D +KI DFG ++ ++ T GT Y+
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE----------FDGERKKTLCGTPNYI 209
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXX 282
PEVL +F D+W+LGC LY +L G PF+ + + RI + P + +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 283 XXXXXXXXXXXPSGRPGAGP--------GGYAVLKM 310
P+ RP GYA +++
Sbjct: 270 SALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRL 305
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 113/236 (47%), Gaps = 10/236 (4%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
I + LG GVG++ KV K TG A+KI++++ I + ++ E L
Sbjct: 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +++L+ ++M +E GGELFD I G L E E+R +++ ++Y H
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
++HRD+KPEN+LL A + KIADFG M D + + A + Y
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAG 194
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
PEV D+W+ G LY +L GT PF D +F++I P Y +
Sbjct: 195 PEV----------DIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLN 240
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 15/220 (6%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
K G G+Y +V+ K TG A+KI+ K +T + + + E VL QLDHP +++L
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
+ F+D + Y+ +E GGELFD+I + SE +A +V+ Y+H ++HRD
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRD 129
Query: 171 IKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
+KPENLLL + D IKI DFG + + K +GTA Y+ PEVL
Sbjct: 130 LKPENLLLESKSRDALIKIVDFG-----------LSAHFEVGGKMKERLGTAYYIAPEVL 178
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
D+W+ G LY +L G PF ++ I +R+
Sbjct: 179 RKKYDE-KCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 134/243 (55%), Gaps = 21/243 (8%)
Query: 30 SKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMD-KKFITKENK 88
+++ F++ +++ +Q G GS+ K + K + G Y +K ++ + +KE +
Sbjct: 15 TENLYFQSMEKYVRLQKI------GEGSFGKAILVKSTEDGRQYVIKEINISRMSSKERE 68
Query: 89 TAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHL-SEDE 146
+ + E VL + HP +V+ +F++ SLY+ ++ CEGG+LF +I + KG L ED+
Sbjct: 69 ES--RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ 126
Query: 147 ARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNA 206
+ ++ AL+++H ++HRDIK +N+ LT DG +++ DFG + VL +
Sbjct: 127 ILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--------VLNST 178
Query: 207 ASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQR 266
+AC +GT Y+ PE+ + P +D+WALGC LY++ + F+ S + +
Sbjct: 179 VELARAC--IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK 236
Query: 267 IIA 269
II+
Sbjct: 237 IIS 239
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 119/226 (52%), Gaps = 20/226 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
FE+ G G+ S V R K+ T YALK++ KK + K+ V+ E VL +L HP
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVL-KKTVDKK----IVRTEIGVLLRLSHPN 109
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+++L F+ + + LE GGELFD+I KG+ SE +A ++++A+ Y+H G+
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI 169
Query: 167 IHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+HRD+KPENLL D +KIADFG K ++ + T GT Y
Sbjct: 170 VHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK-----------TVCGTPGYCA 218
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDT-SEWLIFQRII 268
PE+L D+W++G Y +L G PF D + +F+RI+
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRIL 264
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 18/299 (6%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
F ++ G G + +V + TG +YA K ++KK I K A E+ +L++++
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEAR--FYTAEVVDALEYIHSM 164
VV L + ++ +L + L GG+L I G EAR FY AE+ LE +H
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+++RD+KPEN+LL GHI+I+D G + + + VGT Y+ P
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK-----------GRVGTVGYMAP 354
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI--IARDI--RFPNYFSX 280
EV+ + TF D WALGC LY+M++G SPF+ + + + + + +++ + FS
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSP 414
Query: 281 XXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI-RGQTPPKLASEPMVNF 338
P+ R G G +K HP FK +++K + G P +P +
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIY 473
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 125/237 (52%), Gaps = 20/237 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER--IVLDQLD 103
+++L + G G++S V R K+ TG YA KI++ K ++ + + KLER + L
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARD---HQKLEREARICRLLK 61
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
H +VRL + + Y+ + GGELF+ I ++ + SE +A ++++A+ + H
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 164 MGLIHRDIKPENLLLTAD---GHIKIADFGSVKPMQDSRITVLPNAASDDKAC-TFVGTA 219
MG++HRD+KPENLLL + +K+ADFG +Q D +A F GT
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-----------GDQQAWFGFAGTP 170
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y+ PEVL D+WA G LY +L G PF D + ++Q+I A FP+
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPS 227
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 18/299 (6%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
F ++ G G + +V + TG +YA K ++KK I K A E+ +L++++
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEAR--FYTAEVVDALEYIHSM 164
VV L + ++ +L + L GG+L I G EAR FY AE+ LE +H
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+++RD+KPEN+LL GHI+I+D G + + + VGT Y+ P
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK-----------GRVGTVGYMAP 354
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI--IARDI--RFPNYFSX 280
EV+ + TF D WALGC LY+M++G SPF+ + + + + + +++ + FS
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSP 414
Query: 281 XXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNI-RGQTPPKLASEPMVNF 338
P+ R G G +K HP FK +++K + G P +P +
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIY 473
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+ F ++ G G++S+V K+ TG ++ALK + K + + + ++ E VL ++ H
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK---SPAFRDSSLENEIAVLKKIKH 65
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
+V L ++ T Y+ ++ GGELFD+I +G +E +A +V+ A++Y+H
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 165 GLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
G++HRD+KPENLL + I I DFG K Q+ ++ AC GT Y
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST---------AC---GTPGY 173
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
V PEVL P + D W++G Y +L G PF + +E +F++I
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI 219
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 18/276 (6%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
+++ + G+ G G ++K +DT V+A K++ K + K ++ + E + L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
D+P VV F+D +Y+ LE C L + + ++E EAR++ + + ++Y+H
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
+ +IHRD+K NL L D +KI DFG ++ ++ GT Y+
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE----------FDGERKKXLCGTPNYI 209
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXX 282
PEVL +F D+W+LGC LY +L G PF+ + + RI + P + +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 283 XXXXXXXXXXXPSGRPGAGP--------GGYAVLKM 310
P+ RP GYA +++
Sbjct: 270 SALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRL 305
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 20/288 (6%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
++ G G + +V + TG +YA K ++KK + K +E+ +L ++ +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGH----LSEDEARFYTAEVVDALEYIHSMGL 166
+ F+ L + + GG++ I + E A FYTA++V LE++H +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 167 IHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV 226
I+RD+KPEN+LL DG+++I+D G ++ A K + GT ++ PE+
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELK----------AGQTKTKGYAGTPGFMAPEL 360
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWL----IFQRIIARDIRFPNYFSXXX 282
L F D +ALG TLY+M++ PF+ E + + QR++ + + +P+ FS
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS 420
Query: 283 XXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ--TPP 328
P R G G L+ HP F+ I W+ + TPP
Sbjct: 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPP 468
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 20/288 (6%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
++ G G + +V + TG +YA K ++KK + K +E+ +L ++ +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGH----LSEDEARFYTAEVVDALEYIHSMGL 166
+ F+ L + + GG++ I + E A FYTA++V LE++H +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 167 IHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV 226
I+RD+KPEN+LL DG+++I+D G ++ A K + GT ++ PE+
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELK----------AGQTKTKGYAGTPGFMAPEL 360
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWL----IFQRIIARDIRFPNYFSXXX 282
L F D +ALG TLY+M++ PF+ E + + QR++ + + +P+ FS
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS 420
Query: 283 XXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ--TPP 328
P R G G L+ HP F+ I W+ + TPP
Sbjct: 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPP 468
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 20/288 (6%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
++ G G + +V + TG +YA K ++KK + K +E+ +L ++ +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGH----LSEDEARFYTAEVVDALEYIHSMGL 166
+ F+ L + + GG++ I + E A FYTA++V LE++H +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 167 IHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV 226
I+RD+KPEN+LL DG+++I+D G ++ A K + GT ++ PE+
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELK----------AGQTKTKGYAGTPGFMAPEL 360
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWL----IFQRIIARDIRFPNYFSXXX 282
L F D +ALG TLY+M++ PF+ E + + QR++ + + +P+ FS
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS 420
Query: 283 XXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ--TPP 328
P R G G L+ HP F+ I W+ + TPP
Sbjct: 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPP 468
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 20/288 (6%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
++ G G + +V + TG +YA K ++KK + K +E+ +L ++ +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGH----LSEDEARFYTAEVVDALEYIHSMGL 166
+ F+ L + + GG++ I + E A FYTA++V LE++H +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 167 IHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV 226
I+RD+KPEN+LL DG+++I+D G ++ A K + GT ++ PE+
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELK----------AGQTKTKGYAGTPGFMAPEL 360
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWL----IFQRIIARDIRFPNYFSXXX 282
L F D +ALG TLY+M++ PF+ E + + QR++ + + +P+ FS
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPAS 420
Query: 283 XXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ--TPP 328
P R G G L+ HP F+ I W+ + TPP
Sbjct: 421 KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPP 468
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 18/276 (6%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
+++ + G+ G G ++K +DT V+A K++ K + K ++ + E + L
Sbjct: 24 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 83
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
D+P VV F+D +Y+ LE C L + + ++E EAR++ + + ++Y+H
Sbjct: 84 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 143
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
+ +IHRD+K NL L D +KI DFG ++ ++ GT Y+
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE----------FDGERKKDLCGTPNYI 193
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXX 282
PEVL +F D+W+LGC LY +L G PF+ + + RI + P + +
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 253
Query: 283 XXXXXXXXXXXPSGRPGAGP--------GGYAVLKM 310
P+ RP GYA +++
Sbjct: 254 SALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRL 289
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 18/276 (6%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
+++ + G+ G G ++K +DT V+A K++ K + K ++ + E + L
Sbjct: 40 TMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL 99
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
D+P VV F+D +Y+ LE C L + + ++E EAR++ + + ++Y+H
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
+ +IHRD+K NL L D +KI DFG ++ ++ GT Y+
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE----------FDGERKKDLCGTPNYI 209
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXX 282
PEVL +F D+W+LGC LY +L G PF+ + + RI + P + +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 283 XXXXXXXXXXXPSGRPGAGP--------GGYAVLKM 310
P+ RP GYA +++
Sbjct: 270 SALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRL 305
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 19/230 (8%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS+ KV A T ALK + ++ + K + V+ E L L HP +++L+
Sbjct: 18 GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV 77
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ M +E GGELFD I K ++EDE R + +++ A+EY H ++HRD+KP
Sbjct: 78 ITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKP 136
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLN----S 229
ENLLL + ++KIADFG M D T G+ Y PEV+N +
Sbjct: 137 ENLLLDDNLNVKIADFGLSNIMTDGNFLK-----------TSCGSPNYAAPEVINGKLYA 185
Query: 230 SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279
P D+W+ G LY ML G PF D +F+++ + P++ S
Sbjct: 186 GPEV---DVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLS 232
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 18/236 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER--IVLDQLD 103
D++L + G G++S V R K YA KI++ K ++ + + KLER + L
Sbjct: 32 DYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD---HQKLEREARICRLLK 88
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +VRL + + Y+ + GGELF+ I ++ + SE +A ++++++ +IH
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 164 MGLIHRDIKPENLLLTAD---GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
++HRD+KPENLLL + +K+ADFG +Q + F GT
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF----------GFAGTPG 198
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
Y+ PEVL P D+WA G LY +L G PF D + ++Q+I A FP+
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPS 254
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 10/245 (4%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G ++K DT V+A KI+ K + K ++ + +E + L H VV
Sbjct: 26 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
F+D +++ LE C L + + L+E EAR+Y ++V +Y+H +IHRD+K
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 145
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
NL L D +KI DFG ++ ++ T GT Y+ PEVL+ +
Sbjct: 146 GNLFLNEDLEVKIGDFGLATKVE----------YDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 234 FGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXXXXXXXXXXX 293
F D+W++GC +Y +L G PF+ + + RI + P + +
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 255
Query: 294 PSGRP 298
P+ RP
Sbjct: 256 PTARP 260
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 10/245 (4%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G ++K DT V+A KI+ K + K ++ + +E + L H VV
Sbjct: 26 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 85
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
F+D +++ LE C L + + L+E EAR+Y ++V +Y+H +IHRD+K
Sbjct: 86 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 145
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
NL L D +KI DFG ++ ++ T GT Y+ PEVL+ +
Sbjct: 146 GNLFLNEDLEVKIGDFGLATKVE----------YDGERKKTLCGTPNYIAPEVLSKKGHS 195
Query: 234 FGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXXXXXXXXXXX 293
F D+W++GC +Y +L G PF+ + + RI + P + +
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 255
Query: 294 PSGRP 298
P+ RP
Sbjct: 256 PTARP 260
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 10/245 (4%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G ++K DT V+A KI+ K + K ++ + +E + L H VV
Sbjct: 30 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 89
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
F+D +++ LE C L + + L+E EAR+Y ++V +Y+H +IHRD+K
Sbjct: 90 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 149
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
NL L D +KI DFG ++ ++ T GT Y+ PEVL+ +
Sbjct: 150 GNLFLNEDLEVKIGDFGLATKVE----------YDGERKKTLCGTPNYIAPEVLSKKGHS 199
Query: 234 FGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXXXXXXXXXXX 293
F D+W++GC +Y +L G PF+ + + RI + P + +
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 259
Query: 294 PSGRP 298
P+ RP
Sbjct: 260 PTARP 264
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 19/241 (7%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK-TAYVKLERIV--LDQLD 103
+E+G+ G G ++ V + ++ TG YA K + K+ ++ + + ++ER V L ++
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP ++ L F++ + + LE GGELFD + K L+EDEA + +++D + Y+HS
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 164 MGLIHRDIKPENLLL----TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
+ H D+KPEN++L + IK+ DFG ++ + ++ GT
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-----------AGNEFKNIFGTP 175
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF-PNYF 278
+V PE++N P D+W++G Y +LSG SPF ++ I A + F YF
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYF 235
Query: 279 S 279
S
Sbjct: 236 S 236
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 19/241 (7%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK-TAYVKLERIV--LDQLD 103
+E+G+ G G ++ V + ++ TG YA K + K+ ++ + + ++ER V L ++
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP ++ L F++ + + LE GGELFD + K L+EDEA + +++D + Y+HS
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 164 MGLIHRDIKPENLLL----TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
+ H D+KPEN++L + IK+ DFG ++ + ++ GT
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-----------AGNEFKNIFGTP 182
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF-PNYF 278
+V PE++N P D+W++G Y +LSG SPF ++ I A + F YF
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYF 242
Query: 279 S 279
S
Sbjct: 243 S 243
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 124/241 (51%), Gaps = 19/241 (7%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK-TAYVKLERIV--LDQLD 103
+E+G+ G G ++ V + ++ TG YA K + K+ + + + ++ER V L ++
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP ++ L F++ + + LE GGELFD + K L+EDEA + +++D + Y+HS
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 164 MGLIHRDIKPENLLL----TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
+ H D+KPEN++L + IK+ DFG ++ + ++ GT
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE-----------AGNEFKNIFGTP 196
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF-PNYF 278
+V PE++N P D+W++G Y +LSG SPF ++ I A + F YF
Sbjct: 197 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYF 256
Query: 279 S 279
S
Sbjct: 257 S 257
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 10/245 (4%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G ++K DT V+A KI+ K + K ++ + +E + L H VV
Sbjct: 50 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 109
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
F+D +++ LE C L + + L+E EAR+Y ++V +Y+H +IHRD+K
Sbjct: 110 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 169
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
NL L D +KI DFG ++ ++ GT Y+ PEVL+ +
Sbjct: 170 GNLFLNEDLEVKIGDFGLATKVE----------YDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 234 FGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXXXXXXXXXXX 293
F D+W++GC +Y +L G PF+ + + RI + P + +
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 279
Query: 294 PSGRP 298
P+ RP
Sbjct: 280 PTARP 284
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 10/245 (4%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G ++K DT V+A KI+ K + K ++ + +E + L H VV
Sbjct: 48 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 107
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
F+D +++ LE C L + + L+E EAR+Y ++V +Y+H +IHRD+K
Sbjct: 108 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 167
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
NL L D +KI DFG ++ ++ GT Y+ PEVL+ +
Sbjct: 168 GNLFLNEDLEVKIGDFGLATKVE----------YDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 234 FGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXXXXXXXXXXX 293
F D+W++GC +Y +L G PF+ + + RI + P + +
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 277
Query: 294 PSGRP 298
P+ RP
Sbjct: 278 PTARP 282
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 10/245 (4%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G ++K DT V+A KI+ K + K ++ + +E + L H VV
Sbjct: 24 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGF 83
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
F+D +++ LE C L + + L+E EAR+Y ++V +Y+H +IHRD+K
Sbjct: 84 FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKL 143
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
NL L D +KI DFG ++ ++ GT Y+ PEVL+ +
Sbjct: 144 GNLFLNEDLEVKIGDFGLATKVE----------YDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 234 FGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXXXXXXXXXXXXXX 293
F D+W++GC +Y +L G PF+ + + RI + P + +
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTD 253
Query: 294 PSGRP 298
P+ RP
Sbjct: 254 PTARP 258
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 116/238 (48%), Gaps = 33/238 (13%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKF--ITKENKTAYVKLERIVLDQLDHPGVV 108
K G GS+S + + +A+KI+ K+ T++ TA E HP +V
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCE-------GHPNIV 69
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
+L F D ++ +E GGELF++I K H SE EA + ++V A+ ++H +G++H
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 169 RDIKPENLLLTADG---HIKIADFG--SVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
RD+KPENLL T + IKI DFG +KP P+ C T Y
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKP---------PDNQPLKTPCF---TLHYAA 177
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD-------TSEWLIFQRIIARDIRF 274
PE+LN + DLW+LG LY MLSG PF+ TS I ++I D F
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF 235
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 114/220 (51%), Gaps = 19/220 (8%)
Query: 44 IQDF-ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK---TAYVKLERIVL 99
++DF ++G+ G G ++ V + ++ TG YA K + K+ + ++ E +L
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69
Query: 100 DQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALE 159
Q+ HP ++ L +++ + + LE GGELFD + K LSE+EA + +++D +
Sbjct: 70 RQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 160 YIHSMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
Y+H+ + H D+KPEN++L HIK+ DFG ++D +
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-----------EFKNI 178
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
GT +V PE++N P D+W++G Y +LSG SPF
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 120/231 (51%), Gaps = 24/231 (10%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G++ V ++ +G +K ++K + ++ E VL LDHP ++++F
Sbjct: 31 GSGAFGDVHLVEERSSGLERVIKTINKD--RSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV----VDALEYIHSMGLIHR 169
F+D ++Y+ +E+CEGGEL ++I S + + Y AE+ ++AL Y HS ++H+
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHK 148
Query: 170 DIKPENLLL---TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV 226
D+KPEN+L + IKI DFG + + SD+ + GTA Y+ PEV
Sbjct: 149 DLKPENILFQDTSPHSPIKIIDFGLAELFK-----------SDEHSTNAAGTALYMAPEV 197
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
TF D+W+ G +Y +L+G PF TS + Q+ ++ PNY
Sbjct: 198 FKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE---PNY 244
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 118/220 (53%), Gaps = 16/220 (7%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
K G G+Y +V+ + T A+KI+ K ++ + + ++ E VL LDHP +++L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE-EVAVLKLLDHPNIMKL 101
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
+ F+D + Y+ +E +GGELFD+I + +E +A +V+ + Y+H ++HRD
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRD 161
Query: 171 IKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
+KPENLLL + D IKI DFG ++ + K +GTA Y+ PEVL
Sbjct: 162 LKPENLLLESKEKDALIKIVDFGLSAVFENQK-----------KMKERLGTAYYIAPEVL 210
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
D+W++G L+ +L+G PF ++ I +++
Sbjct: 211 RKKYDE-KCDVWSIGVILFILLAGYPPFGGQTDQEILRKV 249
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 114/229 (49%), Gaps = 22/229 (9%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+EL K G G++ + + A+K +++ EN VK E I L HP
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDEN----VKREIINHRSLRHPN 76
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+VR L + +E GGELF++I + G SEDEARF+ +++ + Y H+M +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 167 IHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
HRD+K EN LL DG +KIADFG K S + P +A VGT AY+
Sbjct: 137 AHRDLKLENTLL--DGSPAPRLKIADFGYSKA---SVLHSQPKSA--------VGTPAYI 183
Query: 223 PPEVLNSSPATFG-NDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270
PEVL D+W+ G TLY ML G PF+D E F++ I R
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 232
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 20/208 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
GVGSYS+ R T YA+K++DK +K + + ++ I+L HP ++ L
Sbjct: 36 GVGSYSECKRCVHKATNMEYAVKVIDK---SKRDPSEEIE---ILLRYGQHPNIITLKDV 89
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ D +Y+ E GGEL D+I + SE EA F + +EY+HS G++HRD+KP
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKP 149
Query: 174 ENLLLTADGH----IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS 229
N+L + ++I DFG K ++ A + T TA +V PEVL
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLR----------AENGLLMTPCYTANFVAPEVLKR 199
Query: 230 SPATFGNDLWALGCTLYQMLSGTSPFKD 257
G D+W+LG LY ML+G +PF +
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 20/208 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
GVGSYS+ R T YA+K++DK +K + + ++ I+L HP ++ L
Sbjct: 36 GVGSYSECKRCVHKATNMEYAVKVIDK---SKRDPSEEIE---ILLRYGQHPNIITLKDV 89
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ D +Y+ E GGEL D+I + SE EA F + +EY+HS G++HRD+KP
Sbjct: 90 YDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKP 149
Query: 174 ENLLLTADGH----IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS 229
N+L + ++I DFG K ++ A + T TA +V PEVL
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLR----------AENGLLMTPCYTANFVAPEVLKR 199
Query: 230 SPATFGNDLWALGCTLYQMLSGTSPFKD 257
G D+W+LG LY ML+G +PF +
Sbjct: 200 QGYDEGCDIWSLGILLYTMLAGYTPFAN 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 19/226 (8%)
Query: 38 PQEHFSIQDF-ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK-TAYVKLE 95
P + ++DF ++G+ G G ++ V + ++ TG YA K + K+ + + ++E
Sbjct: 4 PFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 96 RIV--LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
R V L Q+ H V+ L +++ + + LE GGELFD + K LSE+EA + +
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASD 209
++D + Y+H+ + H D+KPEN++L HIK+ DFG ++D
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---------- 173
Query: 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ GT +V PE++N P D+W++G Y +LSG SPF
Sbjct: 174 -EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 19/226 (8%)
Query: 38 PQEHFSIQDF-ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK-TAYVKLE 95
P + ++DF ++G+ G G ++ V + ++ TG YA K + K+ + + ++E
Sbjct: 4 PFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 96 RIV--LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
R V L Q+ H V+ L +++ + + LE GGELFD + K LSE+EA + +
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASD 209
++D + Y+H+ + H D+KPEN++L HIK+ DFG ++D
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---------- 173
Query: 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ GT +V PE++N P D+W++G Y +LSG SPF
Sbjct: 174 -EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 19/226 (8%)
Query: 38 PQEHFSIQDF-ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK-TAYVKLE 95
P + ++DF ++G+ G G ++ V + ++ TG YA K + K+ + + ++E
Sbjct: 4 PFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 96 RIV--LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
R V L Q+ H V+ L +++ + + LE GGELFD + K LSE+EA + +
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASD 209
++D + Y+H+ + H D+KPEN++L HIK+ DFG ++D
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---------- 173
Query: 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ GT +V PE++N P D+W++G Y +LSG SPF
Sbjct: 174 -EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 19/226 (8%)
Query: 38 PQEHFSIQDF-ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK-TAYVKLE 95
P + ++DF ++G+ G G ++ V + ++ TG YA K + K+ + + ++E
Sbjct: 4 PFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 96 RIV--LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
R V L Q+ H V+ L +++ + + LE GGELFD + K LSE+EA + +
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASD 209
++D + Y+H+ + H D+KPEN++L HIK+ DFG ++D
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---------- 173
Query: 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ GT +V PE++N P D+W++G Y +LSG SPF
Sbjct: 174 -EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 19/226 (8%)
Query: 38 PQEHFSIQDF-ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK-TAYVKLE 95
P + ++DF ++G+ G G ++ V + ++ TG YA K + K+ + + ++E
Sbjct: 4 PFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE 63
Query: 96 RIV--LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
R V L Q+ H V+ L +++ + + LE GGELFD + K LSE+EA + +
Sbjct: 64 REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASD 209
++D + Y+H+ + H D+KPEN++L HIK+ DFG ++D
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV---------- 173
Query: 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ GT +V PE++N P D+W++G Y +LSG SPF
Sbjct: 174 -EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 123/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
A+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 115/229 (50%), Gaps = 22/229 (9%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+EL K G G++ + + + A+K +++ E A VK E I L HP
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----EKIAANVKREIINHRSLRHPN 76
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+VR L + +E GGELF++I + G SEDEARF+ +++ + Y H+M +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 167 IHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
HRD+K EN LL DG +KI DFG S+ +VL + + VGT AY+
Sbjct: 137 CHRDLKLENTLL--DGSPAPRLKICDFGY------SKSSVLHSQPK-----STVGTPAYI 183
Query: 223 PPEVLNSSPATFG-NDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270
PEVL D+W+ G TLY ML G PF+D E F++ I R
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 232
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 115/229 (50%), Gaps = 22/229 (9%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+EL K G G++ + + + A+K +++ EN VK E I L HP
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN----VKREIINHRSLRHPN 75
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+VR L + +E GGELF++I + G SEDEARF+ +++ + Y H+M +
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 167 IHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
HRD+K EN LL DG +KI DFG S+ +VL + + VGT AY+
Sbjct: 136 CHRDLKLENTLL--DGSPAPRLKICDFGY------SKSSVLHSQPK-----STVGTPAYI 182
Query: 223 PPEVLNSSPATFG-NDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270
PEVL D+W+ G TLY ML G PF+D E F++ I R
Sbjct: 183 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 231
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 34/260 (13%)
Query: 18 NNSSTNCPTVQRSKSFAF-------RAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTG 70
NN+S ++ R+K F F ++ ++ + K G G+ +V A + T
Sbjct: 115 NNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTC 174
Query: 71 TVYALKIMDK-KFITKENKTA----YVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMA 123
A++I+ K KF + A V+ E +L +L+HP ++++ FF +D Y+
Sbjct: 175 KKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED---YYIV 231
Query: 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA--- 180
LE EGGELFD++ L E + Y +++ A++Y+H G+IHRD+KPEN+LL++
Sbjct: 232 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 291
Query: 181 DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGN---D 237
D IKI DFG K + ++ + T GT Y+ PEVL S N D
Sbjct: 292 DCLIKITDFGHSKILGETSLMR-----------TLCGTPTYLAPEVLVSVGTAGYNRAVD 340
Query: 238 LWALGCTLYQMLSGTSPFKD 257
W+LG L+ LSG PF +
Sbjct: 341 CWSLGVILFICLSGYPPFSE 360
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 129/258 (50%), Gaps = 30/258 (11%)
Query: 18 NNSSTNCPTVQRSKSFAF-------RAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTG 70
NN+S ++ R+K F F ++ ++ + K G G+ +V A + T
Sbjct: 101 NNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTC 160
Query: 71 TVYALKIMDK-KFITKENKTA----YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125
A++I+ K KF + A V+ E +L +L+HP ++++ F D Y+ LE
Sbjct: 161 KKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIK-NFFDAEDYYIVLE 219
Query: 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA---DG 182
EGGELFD++ L E + Y +++ A++Y+H G+IHRD+KPEN+LL++ D
Sbjct: 220 LMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDC 279
Query: 183 HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGN---DLW 239
IKI DFG K + ++ + T GT Y+ PEVL S N D W
Sbjct: 280 LIKITDFGHSKILGETSLMR-----------TLCGTPTYLAPEVLVSVGTAGYNRAVDCW 328
Query: 240 ALGCTLYQMLSGTSPFKD 257
+LG L+ LSG PF +
Sbjct: 329 SLGVILFICLSGYPPFSE 346
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMD-KKFITKEN-KTAYVKLERIVLDQLDH 104
+EL ++ G G++S V R +TG +A+KI+D KF + T +K E + L H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH----LSEDEARFYTAEVVDALEY 160
P +V L T+ LYM E +G +L +I + SE A Y ++++AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 161 IHSMGLIHRDIKPENLLLTADGH---IKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
H +IHRD+KPEN+LL + + +K+ DFG + +S + A VG
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLV----------AGGRVG 195
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRII 268
T ++ PEV+ P D+W G L+ +LSG PF T E L F+ II
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL-FEGII 245
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 27/225 (12%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDK-KFITKENKTA----YVKLERIVLD 100
++ + K G G+ +V A + T A+KI+ K KF + A V+ E +L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 101 QLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
+L+HP ++++ FF +D Y+ LE EGGELFD++ L E + Y +++ A+
Sbjct: 71 KLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 159 EYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+Y+H G+IHRD+KPEN+LL++ D IKI DFG K + ++ + T
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-----------TL 176
Query: 216 VGTAAYVPPEVLNSSPATFGN---DLWALGCTLYQMLSGTSPFKD 257
GT Y+ PEVL S N D W+LG L+ LSG PF +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 27/225 (12%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDK-KFITKENKTA----YVKLERIVLD 100
++ + K G G+ +V A + T A+KI+ K KF + A V+ E +L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 101 QLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
+L+HP ++++ FF +D Y+ LE EGGELFD++ L E + Y +++ A+
Sbjct: 71 KLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 159 EYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+Y+H G+IHRD+KPEN+LL++ D IKI DFG K + ++ + T
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-----------TL 176
Query: 216 VGTAAYVPPEVLNSSPATFGN---DLWALGCTLYQMLSGTSPFKD 257
GT Y+ PEVL S N D W+LG L+ LSG PF +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 114/229 (49%), Gaps = 22/229 (9%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+EL K G G++ + + + A+K +++ EN VK E I L HP
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN----VKREIINHRSLRHPN 76
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+VR L + +E GGELF++I + G SEDEARF+ +++ + Y H+M +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 167 IHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
HRD+K EN LL DG +KI FG S+ +VL + D VGT AY+
Sbjct: 137 CHRDLKLENTLL--DGSPAPRLKICAFGY------SKSSVLHSQPKDT-----VGTPAYI 183
Query: 223 PPEVLNSSPATFG-NDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270
PEVL D+W+ G TLY ML G PF+D E F++ I R
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 232
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 27/225 (12%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDK-KFITKENKTA----YVKLERIVLD 100
++ + K G G+ +V A + T A+KI+ K KF + A V+ E +L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 101 QLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
+L+HP ++++ FF +D Y+ LE EGGELFD++ L E + Y +++ A+
Sbjct: 71 KLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 159 EYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+Y+H G+IHRD+KPEN+LL++ D IKI DFG K + ++ + T
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-----------TL 176
Query: 216 VGTAAYVPPEVLNSSPATFGN---DLWALGCTLYQMLSGTSPFKD 257
GT Y+ PEVL S N D W+LG L+ LSG PF +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 27/225 (12%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDK-KFITKENKTA----YVKLERIVLD 100
++ + K G G+ +V A + T A+KI+ K KF + A V+ E +L
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 101 QLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
+L+HP ++++ FF +D Y+ LE EGGELFD++ L E + Y +++ A+
Sbjct: 77 KLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 133
Query: 159 EYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+Y+H G+IHRD+KPEN+LL++ D IKI DFG K + ++ + T
Sbjct: 134 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-----------TL 182
Query: 216 VGTAAYVPPEVLNSSPATFGN---DLWALGCTLYQMLSGTSPFKD 257
GT Y+ PEVL S N D W+LG L+ LSG PF +
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 27/225 (12%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDK-KFITKENKTA----YVKLERIVLD 100
++ + K G G+ +V A + T A+KI+ K KF + A V+ E +L
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 101 QLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
+L+HP ++++ FF +D Y+ LE EGGELFD++ L E + Y +++ A+
Sbjct: 70 KLNHPCIIKIKNFFDAED---YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 126
Query: 159 EYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+Y+H G+IHRD+KPEN+LL++ D IKI DFG K + ++ + T
Sbjct: 127 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR-----------TL 175
Query: 216 VGTAAYVPPEVLNSSPATFGN---DLWALGCTLYQMLSGTSPFKD 257
GT Y+ PEVL S N D W+LG L+ LSG PF +
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 179
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 239
Query: 278 FS 279
FS
Sbjct: 240 FS 241
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G++ V R + TG V+ K ++ + + VK E +++QL HP ++ L
Sbjct: 60 GSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQLHHPKLINLHDA 116
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIHSMGLIHRDIK 172
F+D + + + LE GGELFD+I ++ + +SE E Y + + L+++H ++H DIK
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIK 176
Query: 173 PENLLLTAD--GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230
PEN++ +KI DFG + I + A TA + PE+++
Sbjct: 177 PENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-----------TAEFAAPEIVDRE 225
Query: 231 PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF 274
P F D+WA+G Y +LSG SPF + Q + D F
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF 269
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 179
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 239
Query: 278 FS 279
FS
Sbjct: 240 FS 241
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 109/215 (50%), Gaps = 20/215 (9%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+E+ + GVGSYS R T +A+KI+DK +K + T ++ I+L HP
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK---SKRDPTEEIE---ILLRYGQHPN 77
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
++ L + D +Y+ E +GGEL D+I + SE EA + +EY+H+ G+
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 167 IHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
+HRD+KP N+L + I+I DFG K ++ A + T TA +V
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLR----------AENGLLMTPCYTANFV 187
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
PEVL D+W+LG LY ML+G +PF +
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + LE GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 22/237 (9%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
Q + L G GS+ +V A + T A K + K F+ ++ K E ++ LDH
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR---FKQEIEIMKSLDH 82
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P ++RL+ TF+D +Y+ +E C GGELF+++ K E +A +V+ A+ Y H +
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL 142
Query: 165 GLIHRDIKPENLLL---TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
+ HRD+KPEN L + D +K+ DFG + ++ T VGT Y
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR-----------TKVGTPYY 191
Query: 222 VPPEVLNSSPATFG--NDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
V P+VL +G D W+ G +Y +L G PF ++ + +I FP
Sbjct: 192 VSPQVLE---GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPE 245
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 22/237 (9%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
Q + L G GS+ +V A + T A K + K F+ ++ K E ++ LDH
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR---FKQEIEIMKSLDH 65
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P ++RL+ TF+D +Y+ +E C GGELF+++ K E +A +V+ A+ Y H +
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL 125
Query: 165 GLIHRDIKPENLLL---TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
+ HRD+KPEN L + D +K+ DFG + ++ T VGT Y
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR-----------TKVGTPYY 174
Query: 222 VPPEVLNSSPATFG--NDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
V P+VL +G D W+ G +Y +L G PF ++ + +I FP
Sbjct: 175 VSPQVLE---GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPE 228
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 114/229 (49%), Gaps = 22/229 (9%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+EL K G G++ + + + A+K +++ EN VK E I L HP
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN----VKREIINHRSLRHPN 76
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+VR L + +E GGELF++I + G SEDEARF+ +++ + Y H+M +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 167 IHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
HRD+K EN LL DG +KI FG S+ +VL + + VGT AY+
Sbjct: 137 CHRDLKLENTLL--DGSPAPRLKICAFGY------SKSSVLHSQPK-----STVGTPAYI 183
Query: 223 PPEVLNSSPATFG-NDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270
PEVL D+W+ G TLY ML G PF+D E F++ I R
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 232
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 14/235 (5%)
Query: 25 PTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT 84
P Q A R + ++ +F + K G G +S+V RA + G ALK + +
Sbjct: 12 PVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM 71
Query: 85 KENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQIT----SKG 140
A E +L QL+HP V++ + +F + L + LE + G+L I K
Sbjct: 72 DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKR 131
Query: 141 HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200
+ E Y ++ ALE++HS ++HRDIKP N+ +TA G +K+ D G + S+
Sbjct: 132 LIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG-LGRFFSSKT 190
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T A + VGT Y+ PE ++ + F +D+W+LGC LY+M + SPF
Sbjct: 191 TA---------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 122/231 (52%), Gaps = 16/231 (6%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE-NKTAYVKLERIVLDQL 102
I + +G + G GSY KV +T A+KI+ KK + + N A VK E +L +L
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 103 DHPGVVRLFFTF--QDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDAL 158
H V++L ++ +YM +E C G E+ D + K +A Y +++D L
Sbjct: 64 RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLIDGL 122
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
EY+HS G++H+DIKP NLLLT G +KI+ G + + A+DD T G+
Sbjct: 123 EYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP--------FAADDTCRTSQGS 174
Query: 219 AAYVPPEVLNS--SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
A+ PPE+ N + + F D+W+ G TLY + +G PF+ + + +F+ I
Sbjct: 175 PAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 118/228 (51%), Gaps = 16/228 (7%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ--LDH 104
+ELG+I G G S+V A+ + A+K++ + + Y++ R + L+H
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL--ARDPSFYLRFRREAQNAAALNH 71
Query: 105 PGVVRLFFTFQDTFSL----YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
P +V ++ T + Y+ +E +G L D + ++G ++ A A+ AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
H G+IHRD+KP N++++A +K+ DFG + + DS +V AA +GTA
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA-------VIGTAQ 184
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK-DTSEWLIFQRI 267
Y+ PE +D+++LGC LY++L+G PF D+ + + +Q +
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHV 232
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY----VKLERIVLDQL 102
++ G+ G G ++ V + ++ TG YA K + KK TK ++ ++ E +L ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP V+ L +++ + + E GGELFD + K L+E+EA + ++++ + Y+H
Sbjct: 72 QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131
Query: 163 SMGLIHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
S+ + H D+KPEN++L IKI DFG + ++ GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID-----------FGNEFKNIFGT 180
Query: 219 AAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-Y 277
+V PE++N P D+W++G Y +LSG SPF ++ + A + F + Y
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 278 FS 279
FS
Sbjct: 241 FS 242
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 108/215 (50%), Gaps = 20/215 (9%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+E+ + GVGSYS R T +A+KI+DK +K + T ++ I+L HP
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDK---SKRDPTEEIE---ILLRYGQHPN 77
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
++ L + D +Y+ E +GGEL D+I + SE EA + +EY+H+ G+
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 167 IHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
+HRD+KP N+L + I+I DFG K ++ A + T TA +V
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLR----------AENGLLXTPCYTANFV 187
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
PEVL D+W+LG LY L+G +PF +
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 25/227 (11%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIM-----DKKFITKENKTAYVKLERI-----VLDQLD 103
G G+Y +V+ K+ + + A+K++ DK + +NK E I +L LD
Sbjct: 45 GSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD 104
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
HP +++LF F+D Y+ E EGGELF+QI ++ E +A +++ + Y+H
Sbjct: 105 HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK 164
Query: 164 MGLIHRDIKPENLLLTADG---HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
++HRDIKPEN+LL +IKI DFG + + D K +GTA
Sbjct: 165 HNIVHRDIKPENILLENKNSLLNIKIVDFG-----------LSSFFSKDYKLRDRLGTAY 213
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
Y+ PEVL D+W+ G +Y +L G PF ++ I +++
Sbjct: 214 YIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 119/225 (52%), Gaps = 23/225 (10%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
+I G G + +V + ++ TG A KI+ + + + + VK E V++QLDH +++L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEE---VKNEISVMNQLDHANLIQL 151
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIHSMGLIHR 169
+ F+ + + +E +GGELFD+I + + L+E + + ++ + + ++H M ++H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHL 211
Query: 170 DIKPENLL-LTADG-HIKIADFG---SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
D+KPEN+L + D IKI DFG KP + ++ GT ++ P
Sbjct: 212 DLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF--------------GTPEFLAP 257
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA 269
EV+N +F D+W++G Y +LSG SPF ++ I+A
Sbjct: 258 EVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILA 302
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 33/276 (11%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G++ KV +AK +TG + A K+++ K ++E Y+ +E +L DHP +V+L
Sbjct: 28 GDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYI-VEIEILATCDHPYIVKLLGA 84
Query: 114 FQDTFSLYMALESCEGGELFDQIT---SKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
+ L++ +E C GG + D I +G L+E + + ++++AL ++HS +IHRD
Sbjct: 85 YYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRIIHRD 142
Query: 171 IKPENLLLTADGHIKIADFG-SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV--- 226
+K N+L+T +G I++ADFG S K N + K +F+GT ++ PEV
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAK-----------NLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 227 --LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD---IRFPNYFSXX 281
+ +P + D+W+LG TL +M P + + + +I D + P+ +S
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVE 251
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
P RP A A L HPF I
Sbjct: 252 FRDFLKIALDKNPETRPSA-----AQLLEHPFVSSI 282
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 33/283 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+E+ G G++ KV +AK +TG + A K+++ K ++E Y+ +E +L DHP
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYI-VEIEILATCDHPY 69
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQIT---SKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L + L++ +E C GG + D I +G L+E + + ++++AL ++HS
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLHS 127
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFG-SVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
+IHRD+K N+L+T +G I++ADFG S K N + K +F+GT ++
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAK-----------NLKTLQKRDSFIGTPYWM 176
Query: 223 PPEV-----LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD---IRF 274
PEV + +P + D+W+LG TL +M P + + + +I D +
Sbjct: 177 APEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLT 236
Query: 275 PNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
P+ +S P RP A A L HPF I
Sbjct: 237 PSKWSVEFRDFLKIALDKNPETRPSA-----AQLLEHPFVSSI 274
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 16/228 (7%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ--LDH 104
+ELG+I G G S+V A+ + A+K++ + + Y++ R + L+H
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL--ARDPSFYLRFRREAQNAAALNH 71
Query: 105 PGVVRLFFTFQDTFSL----YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
P +V ++ T + Y+ +E +G L D + ++G ++ A A+ AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
H G+IHRD+KP N+L++A +K+ DFG + + DS +V AA +GTA
Sbjct: 132 SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAA-------VIGTAQ 184
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK-DTSEWLIFQRI 267
Y+ PE +D+++LGC LY++L+G PF D+ + +Q +
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 114/229 (49%), Gaps = 22/229 (9%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ K G G++ + T + A+K +++ EN V+ E I L HP
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN----VQREIINHRSLRHPN 77
Query: 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
+VR L + +E GGEL+++I + G SEDEARF+ +++ + Y HSM +
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 167 IHRDIKPENLLLTADG----HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
HRD+K EN LL DG +KI DFG S+ +VL + + VGT AY+
Sbjct: 138 CHRDLKLENTLL--DGSPAPRLKICDFGY------SKSSVLHSQPK-----STVGTPAYI 184
Query: 223 PPEVLNSSPATFG-NDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270
PEVL D+W+ G TLY ML G PF+D E +++ I R
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR 233
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 16/228 (7%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ--LDH 104
+ELG+I G G S+V A+ + A+K++ + + Y++ R + L+H
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL--ARDPSFYLRFRREAQNAAALNH 71
Query: 105 PGVVRLFFTFQDTFSL----YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
P +V ++ T + Y+ +E +G L D + ++G ++ A A+ AL +
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
H G+IHRD+KP N++++A +K+ DFG + + DS +V AA +GTA
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA-------VIGTAQ 184
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK-DTSEWLIFQRI 267
Y+ PE +D+++LGC LY++L+G PF D+ + +Q +
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 173
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 174 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 59
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 171
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 172 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 211
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 19/222 (8%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
++D++L + G G+Y +V A T A+KI+D K + +K E + L+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 63
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+G+ HRDIKPENLLL ++KI+DFG + + L N K C GT YV
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPYVA 175
Query: 224 PEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 176 PELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 19/222 (8%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
++D++L + G G+Y +V A T A+KI+D K + +K E + L+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 63
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+G+ HRDIKPENLLL ++KI+DFG + + L N K C GT YV
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPYVA 175
Query: 224 PEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 176 PELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 19/222 (8%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
++D++L + G G+Y +V A T A+KI+D K + +K E + L+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLN 63
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
+G+ HRDIKPENLLL ++KI+DFG + + L N K C GT YV
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPYVA 175
Query: 224 PEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 176 PELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 173
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 174 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 16/228 (7%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ--LDH 104
+ELG+I G G S+V A+ + A+K++ + + Y++ R + L+H
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL--ARDPSFYLRFRREAQNAAALNH 71
Query: 105 PGVVRLFFTFQDTFSL----YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
P +V ++ T + Y+ +E +G L D + ++G ++ A A+ AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
H G+IHRD+KP N++++A +K+ DFG + + DS +V AA +GTA
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA-------VIGTAQ 184
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK-DTSEWLIFQRI 267
Y+ PE +D+++LGC LY++L+G PF D+ + +Q +
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 16/228 (7%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ--LDH 104
+ELG+I G G S+V A+ + A+K++ + + Y++ R + L+H
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL--ARDPSFYLRFRREAQNAAALNH 71
Query: 105 PGVVRLFFTFQDTFSL----YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
P +V ++ T + Y+ +E +G L D + ++G ++ A A+ AL +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
H G+IHRD+KP N++++A +K+ DFG + + DS +V AA +GTA
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA-------VIGTAQ 184
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK-DTSEWLIFQRI 267
Y+ PE +D+++LGC LY++L+G PF D+ + +Q +
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 61
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 173
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 174 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 16/228 (7%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ--LDH 104
+ELG+I G G S+V A+ + A+K++ + + Y++ R + L+H
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL--ARDPSFYLRFRREAQNAAALNH 88
Query: 105 PGVVRLFFTFQDTFSL----YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
P +V ++ T + Y+ +E +G L D + ++G ++ A A+ AL +
Sbjct: 89 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 148
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
H G+IHRD+KP N++++A +K+ DFG + + DS +V AA +GTA
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAA-------VIGTAQ 201
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK-DTSEWLIFQRI 267
Y+ PE +D+++LGC LY++L+G PF D+ + +Q +
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 249
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 123/267 (46%), Gaps = 36/267 (13%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFI---TKENKTAYVKLERIVLDQL 102
++ LG + G G + V ++ A+K++ + + + + + LE +L ++
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 103 D----HPGVVRLFFTFQDTFSLYMALES-CEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
HPGV+RL F+ + LE +LFD IT KG L E +R + +VV A
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 158 LEYIHSMGLIHRDIKPENLLL-TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
+++ HS G++HRDIK EN+L+ G K+ DFGS + D T F
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYT------------DFD 199
Query: 217 GTAAYVPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271
GT Y PPE + ++ PAT +W+LG LY M+ G PF+ Q I+ +
Sbjct: 200 GTRVYSPPEWISRHQYHALPAT----VWSLGILLYDMVCGDIPFERD------QEILEAE 249
Query: 272 IRFPNYFSXXXXXXXXXXXXXXPSGRP 298
+ FP + S PS RP
Sbjct: 250 LHFPAHVSPDCCALIRRCLAPKPSSRP 276
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINAM 61
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 173
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 174 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKM 61
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG TV + GT Y
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLA--------TVFRYNNRERLLNKMXGTLPY 173
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 174 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG TV + GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLA--------TVFRYNNRERLLNKMXGTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG TV + GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLA--------TVFRYNNRERLLNKMXGTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN--------KMXGTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+Y +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEIXINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG TV + GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLA--------TVFRYNNRERLLNKMXGTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 111/220 (50%), Gaps = 18/220 (8%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P+E F+ +L +I G GS+ +V + T V A+KI+D E++ ++ E
Sbjct: 17 PEELFT----KLDRI-GKGSFGEVYKGIDNHTKEVVAIKIID--LEEAEDEIEDIQQEIT 69
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
VL Q D P + R F ++ + L++ +E GG D + G L E E++
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKG 128
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L+Y+HS IHRDIK N+LL+ G +K+ADFG + D++I K FVG
Sbjct: 129 LDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI----------KRNXFVG 178
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
T ++ PEV+ S F D+W+LG T ++ G P D
Sbjct: 179 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 24/247 (9%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
H +++E +I G G S V R T YA+KI+D + +L L
Sbjct: 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72
Query: 101 QLD-------HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
++D HP +++L T++ ++ + + GELFD +T K LSE E R
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+++ + +H + ++HRD+KPEN+LL D +IK+ DFG + +K
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-----------EKLR 181
Query: 214 TFVGTAAYVPPEV----LNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
+ GT +Y+ PE+ +N + +G D+W+ G +Y +L+G+ PF + L+ + I
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
Query: 268 IARDIRF 274
++ + +F
Sbjct: 242 MSGNYQF 248
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 23/218 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ +++ + G G++ V R + TG +A K + E+ V+ E + L
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLR 106
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIH 162
HP +V L F+D + M E GGELF+++ + + +SEDEA Y +V L ++H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 163 SMGLIHRDIKPENLLLTA--DGHIKIADFG---SVKPMQDSRITVLPNAASDDKACTFVG 217
+H D+KPEN++ T +K+ DFG + P Q ++T G
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--------------G 212
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
TA + PEV P + D+W++G Y +LSG SPF
Sbjct: 213 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 29/245 (11%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKEN---------KTAYVKLE 95
Q ++ + G G S V R TG +A+KIM+ +T E + A +
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIME---VTAERLSPEQLEEVREATRRET 150
Query: 96 RIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
I+ HP ++ L +++ + +++ + GELFD +T K LSE E R ++
Sbjct: 151 HILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLL 210
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+A+ ++H+ ++HRD+KPEN+LL + I+++DFG ++ +K
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG-----------EKLREL 259
Query: 216 VGTAAYVPPEVLNSS----PATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA 269
GT Y+ PE+L S +G DLWA G L+ +L+G+ PF + L+ + I+
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME 319
Query: 270 RDIRF 274
+F
Sbjct: 320 GQYQF 324
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 112/231 (48%), Gaps = 20/231 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMD-KKFITKEN-KTAYVKLERIVLDQLDH 104
+EL ++ G G +S V R +TG +A+KI+D KF + T +K E + L H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH----LSEDEARFYTAEVVDALEY 160
P +V L T+ LYM E +G +L +I + SE A Y ++++AL Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 161 IHSMGLIHRDIKPENLLLTADGH---IKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
H +IHRD+KP +LL + + +K+ FG + +S + A VG
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV----------AGGRVG 197
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRII 268
T ++ PEV+ P D+W G L+ +LSG PF T E L F+ II
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL-FEGII 247
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 23/218 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ +++ + G G++ V R + TG +A K + E+ V+ E + L
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLR 212
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIH 162
HP +V L F+D + M E GGELF+++ + + +SEDEA Y +V L ++H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 163 SMGLIHRDIKPENLLLTA--DGHIKIADFG---SVKPMQDSRITVLPNAASDDKACTFVG 217
+H D+KPEN++ T +K+ DFG + P Q ++T G
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--------------G 318
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
TA + PEV P + D+W++G Y +LSG SPF
Sbjct: 319 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 30/250 (12%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
H +++E +I G G S V R T YA+KI+D + +L L
Sbjct: 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72
Query: 101 QLD-------HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
++D HP +++L T++ ++ + + GELFD +T K LSE E R
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFG---SVKPMQDSRITVLPNAASDD 210
+++ + +H + ++HRD+KPEN+LL D +IK+ DFG + P + R
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR----------- 181
Query: 211 KACTFVGTAAYVPPEV----LNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIF 264
+ C GT +Y+ PE+ +N + +G D+W+ G +Y +L+G+ PF + L+
Sbjct: 182 EVC---GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 265 QRIIARDIRF 274
+ I++ + +F
Sbjct: 239 RMIMSGNYQF 248
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 27/283 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
DFE + G G++ +VV+A+ YA+K K E K + + E ++L L+H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIK----KIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 106 GVVRLFFTF-------------QDTFSLYMALESCEGGELFDQITSKG-HLSEDEARFYT 151
VVR + + + +L++ +E CE G L+D I S+ + DE
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNA----A 207
++++AL YIHS G+IHRD+KP N+ + ++KI DFG K + S + ++
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 208 SDDKACTFVGTAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWL-IFQ 265
S D + +GTA YV EVL+ + D+++LG ++M+ PF E + I +
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILK 239
Query: 266 RIIARDIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVL 308
++ + I FP F P PG +L
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 124/246 (50%), Gaps = 30/246 (12%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMD-------KKFITKENKTAYVKLERI 97
+++E +I G G S V R T YA+KI+D +E + A +K I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
+ HP +++L T++ ++ + + GELFD +T K LSE E R +++
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFG---SVKPMQDSRITVLPNAASDDKACT 214
+ +H + ++HRD+KPEN+LL D +IK+ DFG + P + R + C
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR-----------EVC- 171
Query: 215 FVGTAAYVPPEV----LNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSEWLIFQRII 268
GT +Y+ PE+ +N + +G D+W+ G +Y +L+G+ PF + L+ + I+
Sbjct: 172 --GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 229
Query: 269 ARDIRF 274
+ + +F
Sbjct: 230 SGNYQF 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 112/231 (48%), Gaps = 20/231 (8%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMD-KKFITKEN-KTAYVKLERIVLDQLDH 104
+EL ++ G G +S V R +TG +A+KI+D KF + T +K E + L H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH----LSEDEARFYTAEVVDALEY 160
P +V L T+ LYM E +G +L +I + SE A Y ++++AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 161 IHSMGLIHRDIKPENLLLTADGH---IKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
H +IHRD+KP +LL + + +K+ FG + +S + A VG
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV----------AGGRVG 195
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRII 268
T ++ PEV+ P D+W G L+ +LSG PF T E L F+ II
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL-FEGII 245
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 36 RAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLE 95
+ P+E F + L K+ G GSY V +A +TG + A+K + E+ + E
Sbjct: 25 KQPEEVFDV----LEKL-GEGSYGSVYKAIHKETGQIVAIK-----QVPVESDLQEIIKE 74
Query: 96 RIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEV 154
++ Q D P VV+ + ++ L++ +E C G + D I + L+EDE
Sbjct: 75 ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQST 134
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
+ LEY+H M IHRDIK N+LL +GH K+ADFG + D K
Sbjct: 135 LKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMA----------KRNX 184
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
+GT ++ PEV+ D+W+LG T +M G P+ D
Sbjct: 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 115/224 (51%), Gaps = 23/224 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK--ENKTAYVKLERIVLDQ 101
++D++L + G G+ +V A T A+KI+D K EN +K E +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN----IKKEICINKM 60
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
L+H VV+ + ++ Y+ LE C GGELFD+I + E +A+ + +++ + Y+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H +G+ HRDIKPENLLL ++KI+DFG + + L N K C GT Y
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN-----KMC---GTLPY 172
Query: 222 VPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
V PE+L ++ P D+W+ G L ML+G P+ S+
Sbjct: 173 VAPELLKRREFHAEPV----DVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 114/215 (53%), Gaps = 17/215 (7%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
++ G G+Y+KV A + G YA+KI++K+ ++ + ++E + Q + ++ L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV-FREVETLYQCQ-GNKNILEL 76
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
F+D Y+ E +GG + I + H +E EA +V AL+++H+ G+ HRD
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRD 136
Query: 171 IKPENLLLTADGH---IKIADF--GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPE 225
+KPEN+L + +KI DF GS + +S + + + T G+A Y+ PE
Sbjct: 137 LKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPI-----TTPELTTPCGSAEYMAPE 191
Query: 226 VLN--SSPATFGN---DLWALGCTLYQMLSGTSPF 255
V+ + ATF + DLW+LG LY MLSG PF
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 22/222 (9%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+D+E+ G GSY + + ++ G + K +D +T+ K V E +L +L H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-EVNLLRELKH 64
Query: 105 PGVVRLFFTFQD--TFSLYMALESCEGGELFDQIT----SKGHLSEDEARFYTAEVVDAL 158
P +VR + D +LY+ +E CEGG+L IT + +L E+ ++ AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 159 EYIHSMG-----LIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ H ++HRD+KP N+ L ++K+ DFG + + +D A
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN----------HDEDFAK 174
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
FVGT Y+ PE +N +D+W+LGC LY++ + PF
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 18/220 (8%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P+E F+ +L KI G GS+ +V + T V A+KI+D E++ ++ E
Sbjct: 5 PEELFT----KLEKI-GKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEIT 57
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
VL Q D P V + + ++ L++ +E GG D + G L E + E++
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKG 116
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L+Y+HS IHRDIK N+LL+ G +K+ADFG + D++I K TFVG
Sbjct: 117 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI----------KRNTFVG 166
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
T ++ PEV+ S D+W+LG T ++ G P +
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 206
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+D+E+ G GSY + + ++ G + K +D +T+ K V E +L +L H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-EVNLLRELKH 64
Query: 105 PGVVRLFFTFQD--TFSLYMALESCEGGELFDQIT----SKGHLSEDEARFYTAEVVDAL 158
P +VR + D +LY+ +E CEGG+L IT + +L E+ ++ AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 159 EYIHSMG-----LIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ H ++HRD+KP N+ L ++K+ DFG + +L + S K
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--------ILNHDTSFAK-- 174
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
TFVGT Y+ PE +N +D+W+LGC LY++ + PF
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 33 FAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYV 92
F P+E F+ +L KI G GS+ +V + T V A+KI+D E++ +
Sbjct: 20 FQSMDPEELFT----KLEKI-GKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDI 72
Query: 93 KLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTA 152
+ E VL Q D P V + + ++ L++ +E GG D + G L E +
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILR 131
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
E++ L+Y+HS IHRDIK N+LL+ G +K+ADFG + D++I K
Sbjct: 132 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI----------KR 181
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
TFVGT ++ PEV+ S D+W+LG T ++ G P +
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 226
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 21/221 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G++ KV +A+ +T + A K++D K ++E Y+ +E +L DHP +V+L
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYM-VEIDILASCDHPNIVKLLDA 102
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEYIHSMGLIHRDI 171
F +L++ +E C GG + D + + L+E + + + +DAL Y+H +IHRD+
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 172 KPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL---- 227
K N+L T DG IK+ADFG N + + +F+GT ++ PEV+
Sbjct: 162 KAGNILFTLDGDIKLADFG----------VSAKNTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 228 -NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
P + D+W+LG TL +M P + + + +I
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+D+E+ G GSY + + ++ G + K +D +T+ K V E +L +L H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-EVNLLRELKH 64
Query: 105 PGVVRLFFTFQD--TFSLYMALESCEGGELFDQIT----SKGHLSEDEARFYTAEVVDAL 158
P +VR + D +LY+ +E CEGG+L IT + +L E+ ++ AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 159 EYIHSMG-----LIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ H ++HRD+KP N+ L ++K+ DFG + +L + S KA
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--------ILNHDTSFAKA- 175
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
FVGT Y+ PE +N +D+W+LGC LY++ + PF
Sbjct: 176 -FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 21/221 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G++ KV +A+ +T + A K++D K ++E Y+ +E +L DHP +V+L
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYM-VEIDILASCDHPNIVKLLDA 102
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEYIHSMGLIHRDI 171
F +L++ +E C GG + D + + L+E + + + +DAL Y+H +IHRD+
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 172 KPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL---- 227
K N+L T DG IK+ADFG N + +F+GT ++ PEV+
Sbjct: 162 KAGNILFTLDGDIKLADFG----------VSAKNTRXIQRRDSFIGTPYWMAPEVVMCET 211
Query: 228 -NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
P + D+W+LG TL +M P + + + +I
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 109/214 (50%), Gaps = 14/214 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS V A + TG A+K MD + K+ + + E +++ H VV ++ +
Sbjct: 54 GEGSTGIVCIATEKHTGKQVAVKKMD---LRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E EGG L D I + ++E++ V+ AL Y+H+ G+IHRDIK
Sbjct: 111 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKS 169
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
+++LLT+DG IK++DFG + + K VGT ++ PEV++ P
Sbjct: 170 DSILLTSDGRIKLSDFGFCAQV----------SKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 234 FGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
D+W+LG + +M+ G P+ + +RI
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI 253
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 115/220 (52%), Gaps = 20/220 (9%)
Query: 55 VGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTF 114
+G + KV +A+ +T + A K++D K ++E Y+ +E +L DHP +V+L F
Sbjct: 20 LGDFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYM-VEIDILASCDHPNIVKLLDAF 76
Query: 115 QDTFSLYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEYIHSMGLIHRDIK 172
+L++ +E C GG + D + + L+E + + + +DAL Y+H +IHRD+K
Sbjct: 77 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 173 PENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL----- 227
N+L T DG IK+ADFG +++R + + +F+GT ++ PEV+
Sbjct: 136 AGNILFTLDGDIKLADFGV--SAKNTRTXI-------QRRDSFIGTPYWMAPEVVMCETS 186
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
P + D+W+LG TL +M P + + + +I
Sbjct: 187 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 226
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 27/283 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
DFE + G G++ +VV+A+ YA+K K E K + + E ++L L+H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIK----KIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 106 GVVRLFFTF-------------QDTFSLYMALESCEGGELFDQITSKG-HLSEDEARFYT 151
VVR + + + +L++ +E CE L+D I S+ + DE
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNA----A 207
++++AL YIHS G+IHRD+KP N+ + ++KI DFG K + S + ++
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 208 SDDKACTFVGTAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWL-IFQ 265
S D + +GTA YV EVL+ + D+++LG ++M+ PF E + I +
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMERVNILK 239
Query: 266 RIIARDIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVL 308
++ + I FP F P PG +L
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 21/221 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G++ KV +A+ +T + A K++D K ++E Y+ +E +L DHP +V+L
Sbjct: 46 GDGAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYM-VEIDILASCDHPNIVKLLDA 102
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEYIHSMGLIHRDI 171
F +L++ +E C GG + D + + L+E + + + +DAL Y+H +IHRD+
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 172 KPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL---- 227
K N+L T DG IK+ADFG N + F+GT ++ PEV+
Sbjct: 162 KAGNILFTLDGDIKLADFG----------VSAKNTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 228 -NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
P + D+W+LG TL +M P + + + +I
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 18/220 (8%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P+E F+ +L KI G GS+ +V + T V A+KI+D E++ ++ E
Sbjct: 20 PEELFT----KLEKI-GKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEIT 72
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
VL Q D P V + + ++ L++ +E GG D + G L E + E++
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKG 131
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L+Y+HS IHRDIK N+LL+ G +K+ADFG + D++I K FVG
Sbjct: 132 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI----------KRNXFVG 181
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
T ++ PEV+ S D+W+LG T ++ G P +
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 108/202 (53%), Gaps = 14/202 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS V A++ +G A+K+MD + K+ + + E +++ H VV ++ +
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E +GG L D I S+ L+E++ V+ AL Y+H+ G+IHRDIK
Sbjct: 111 YLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKS 169
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
+++LLT DG +K++DFG + +P K VGT ++ PEV++ S
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKD----VP------KRKXLVGTPYWMAPEVISRSLYA 219
Query: 234 FGNDLWALGCTLYQMLSGTSPF 255
D+W+LG + +M+ G P+
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPPY 241
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 18/220 (8%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P+E F+ +L KI G GS+ +V + T V A+KI+D E++ ++ E
Sbjct: 5 PEELFT----KLEKI-GKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEIT 57
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
VL Q D P V + + ++ L++ +E GG D + G L E + E++
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKG 116
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L+Y+HS IHRDIK N+LL+ G +K+ADFG + D++I K FVG
Sbjct: 117 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI----------KRNXFVG 166
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
T ++ PEV+ S D+W+LG T ++ G P +
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 206
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 21/216 (9%)
Query: 52 IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ-LDHPGVVRL 110
+ G G+Y V + + ++I K+ ++++ + E I L + L H +V+
Sbjct: 15 VLGKGTYGIVYAGRDLSN----QVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSK-GHLSEDEAR--FYTAEVVDALEYIHSMGLI 167
+F + + + +E GG L + SK G L ++E FYT ++++ L+Y+H ++
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 168 HRDIKPENLLL-TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV 226
HRDIK +N+L+ T G +KI+DFG+ K + A + TF GT Y+ PE+
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRL----------AGINPCTETFTGTLQYMAPEI 180
Query: 227 LNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSE 260
++ P +G D+W+LGCT+ +M +G PF + E
Sbjct: 181 IDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE 216
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 54/281 (19%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKEN--KTAYVKLERIVLDQL 102
+ + L G GSY V A + T + A+KIM+K I + N +K E ++ +L
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTA----- 152
HP + RL+ ++D + + +E C GG L D++ S G + D +
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 153 ------------------------------EVVDALEYIHSMGLIHRDIKPENLLLTADG 182
++ AL Y+H+ G+ HRDIKPEN L + +
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 183 --HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFG--NDL 238
IK+ DFG K N T GT +V PEVLN++ ++G D
Sbjct: 206 SFEIKLVDFGLSKEFYKL------NNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259
Query: 239 WALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF--PNY 277
W+ G L+ +L G PF ++ +++ + + F PNY
Sbjct: 260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNY 300
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 21/216 (9%)
Query: 52 IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ-LDHPGVVRL 110
+ G G+Y V + + ++I K+ ++++ + E I L + L H +V+
Sbjct: 29 VLGKGTYGIVYAGRDLSN----QVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSK-GHLSEDEAR--FYTAEVVDALEYIHSMGLI 167
+F + + + +E GG L + SK G L ++E FYT ++++ L+Y+H ++
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 168 HRDIKPENLLL-TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV 226
HRDIK +N+L+ T G +KI+DFG+ K + A + TF GT Y+ PE+
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRL----------AGINPCTETFTGTLQYMAPEI 194
Query: 227 LNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSE 260
++ P +G D+W+LGCT+ +M +G PF + E
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE 230
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL---ERIVLDQLDH 104
++GKI G GSY V + + DTG + A+K KF+ E+ K+ E +L QL H
Sbjct: 7 KIGKI-GEGSYGVVFKCRNRDTGQIVAIK----KFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
P +V L F+ L++ E C+ L + + + E + T + + A+ + H
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
IHRD+KPEN+L+T IK+ DFG +R+ P+ DD+ V T Y P
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGF------ARLLTGPSDYYDDE----VATRWYRSP 171
Query: 225 EVLNSSPATFGN--DLWALGCTLYQMLSGT 252
E+L +G D+WA+GC ++LSG
Sbjct: 172 ELLVGD-TQYGPPVDVWAIGCVFAELLSGV 200
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 205
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 206 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 258
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 259 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 206
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 207 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 259
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 260 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 294
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 177
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 178 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 230
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 231 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 265
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 205
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 206 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 258
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 259 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 293
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 206
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 207 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 259
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 260 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 294
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 206
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 207 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 259
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 260 VSXECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 294
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 159 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 206
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 207 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 259
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 260 VSXECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 294
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 205
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 206 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 258
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 259 VSXECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 293
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 173
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 174 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQR 226
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 227 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 261
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 193
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 194 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 246
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 247 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 281
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 205
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 206 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 258
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 259 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 293
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 85 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 192
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 193 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 245
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 246 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 280
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 220
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 221 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 273
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 274 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 308
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 178
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 179 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 231
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 232 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 266
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 18/220 (8%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P+E F+ +L +I G GS+ +V + T V A+KI+D E++ ++ E
Sbjct: 21 PEELFT----KLERI-GKGSFGEVFKGIDNRTQQVVAIKIID--LEEAEDEIEDIQQEIT 73
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDA 157
VL Q D V + + ++ L++ +E GG D + + G E + E++
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKG 132
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
L+Y+HS IHRDIK N+LL+ G +K+ADFG + D++I K TFVG
Sbjct: 133 LDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI----------KRNTFVG 182
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
T ++ PEV+ S D+W+LG T ++ G P D
Sbjct: 183 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD 222
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 177
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 178 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 230
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 231 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 178
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 179 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 231
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 232 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 266
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 220
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 221 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 273
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 274 VSXECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 308
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 178
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 179 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 231
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 232 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 266
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 104
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 105 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 164
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 165 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 212
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 213 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 265
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 266 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 300
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 193
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 194 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 246
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 247 VSXECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 281
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 85 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 145 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 192
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 193 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 245
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 246 VSXECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 280
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 176
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 177 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 229
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 230 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 264
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 173
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 174 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 226
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 227 VSSECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 261
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 58 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 117
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 118 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 177
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 178 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 225
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 226 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 278
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 279 VSXECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 313
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 173
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 174 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 226
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 227 VSXECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 261
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 93 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 200
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 201 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 253
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S PS RP + ++ HP+ + +
Sbjct: 254 VSXECQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 288
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 85 KENKTAYVKLERIVLD--QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHL 142
+E + + ER V + QL H +V + ++ Y+ +E EG L + I S G L
Sbjct: 49 REKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPL 108
Query: 143 SEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202
S D A +T +++D +++ H M ++HRDIKP+N+L+ ++ +KI DFG K + ++ +T
Sbjct: 109 SVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT- 167
Query: 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ +GT Y PE D++++G LY+ML G PF
Sbjct: 168 --------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 34/228 (14%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
FEL ++ G G+Y +V + + + TG + A+K+MD ++ +K E +L + H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHH- 80
Query: 107 VVRLFFTFQDTF----------SLYMALESCEGGELFDQI-TSKGH-LSEDEARFYTAEV 154
R T+ F L++ +E C G + D I +KG+ L E+ + E+
Sbjct: 81 --RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 138
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
+ L ++H +IHRDIK +N+LLT + +K+ DFG V D + + T
Sbjct: 139 LRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG-VSAQLDRTVG---------RRNT 188
Query: 215 FVGTAAYVPPEVL--NSSPAT---FGNDLWALGCTLYQMLSGTSPFKD 257
F+GT ++ PEV+ + +P F +DLW+LG T +M G P D
Sbjct: 189 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKT---AYVKLERIVLDQLD 103
+++G + G G + V ++ A+K ++K I+ + V +E ++L ++
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 104 H--PGVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEY 160
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ +
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 161 IHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
H+ G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT
Sbjct: 146 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTR 193
Query: 220 AYVPPEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277
Y PPE + G +W+LG LY M+ G PF+ E II + F
Sbjct: 194 VYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQR 246
Query: 278 FSXXXXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
S P RP + ++ HP+ + +
Sbjct: 247 VSXECQHLIRWCLALRPXDRP-----TFEEIQNHPWMQDV 281
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 27/255 (10%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ DFE + G G + V AK YA+K + + +E V E L +L+
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREVKALAKLE 61
Query: 104 HPGVVRLFFTFQDTFS------------LYMALESCEGGELFDQITSKGHLSEDEARFYT 151
HPG+VR F + + + LY+ ++ C L D + + + E E
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 152 ---AEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM--QDSRITVLPNA 206
++ +A+E++HS GL+HRD+KP N+ T D +K+ DFG V M + TVL
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 207 ASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQR 266
+ + VGT Y+ PE ++ + + D+++LG L+++L PF E + R
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMERV---R 235
Query: 267 II--ARDIRFPNYFS 279
+ R+++FP F+
Sbjct: 236 TLTDVRNLKFPPLFT 250
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS V A +G + A+K MD + K+ + + E +++ H VV ++ +
Sbjct: 160 GEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E EGG L D I + ++E++ V+ AL +H+ G+IHRDIK
Sbjct: 217 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 275
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
+++LLT DG +K++DFG + + + VGT ++ PE+++ P
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQV----------SKEVPRRKXLVGTPYWMAPELISRLPYG 325
Query: 234 FGNDLWALGCTLYQMLSGTSPF 255
D+W+LG + +M+ G P+
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPPY 347
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS V A +G + A+K MD + K+ + + E +++ H VV ++ +
Sbjct: 83 GEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E EGG L D I + ++E++ V+ AL +H+ G+IHRDIK
Sbjct: 140 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 198
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
+++LLT DG +K++DFG + + + VGT ++ PE+++ P
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQV----------SKEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 234 FGNDLWALGCTLYQMLSGTSPF 255
D+W+LG + +M+ G P+
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPPY 270
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS V A +G + A+K MD + K+ + + E +++ H VV ++ +
Sbjct: 38 GEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E EGG L D I + ++E++ V+ AL +H+ G+IHRDIK
Sbjct: 95 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 153
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
+++LLT DG +K++DFG + + + VGT ++ PE+++ P
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQV----------SKEVPRRKXLVGTPYWMAPELISRLPYG 203
Query: 234 FGNDLWALGCTLYQMLSGTSPF 255
D+W+LG + +M+ G P+
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPPY 225
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS V A +G + A+K MD + K+ + + E +++ H VV ++ +
Sbjct: 40 GEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E EGG L D I + ++E++ V+ AL +H+ G+IHRDIK
Sbjct: 97 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 155
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
+++LLT DG +K++DFG + + + VGT ++ PE+++ P
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQV----------SKEVPRRKXLVGTPYWMAPELISRLPYG 205
Query: 234 FGNDLWALGCTLYQMLSGTSPF 255
D+W+LG + +M+ G P+
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPPY 227
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 27/283 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
DFE + G G++ +VV+A+ YA+K K E K + + E +L L+H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIK----KIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 106 GVVRLFFTF-------------QDTFSLYMALESCEGGELFDQITSKG-HLSEDEARFYT 151
VVR + + + +L++ E CE L+D I S+ + DE
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNA----A 207
++++AL YIHS G+IHR++KP N+ + ++KI DFG K + S + ++
Sbjct: 123 RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 208 SDDKACTFVGTAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFKDTSEWL-IFQ 265
S D + +GTA YV EVL+ + D ++LG ++ + PF E + I +
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVNILK 239
Query: 266 RIIARDIRFPNYFSXXXXXXXXXXXXXXPSGRPGAGPGGYAVL 308
++ + I FP F P PG +L
Sbjct: 240 KLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS V A +G + A+K MD + K+ + + E +++ H VV ++ +
Sbjct: 33 GEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E EGG L D I + ++E++ V+ AL +H+ G+IHRDIK
Sbjct: 90 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 148
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
+++LLT DG +K++DFG + +P + VGT ++ PE+++ P
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSKE----VP------RRKXLVGTPYWMAPELISRLPYG 198
Query: 234 FGNDLWALGCTLYQMLSGTSPF 255
D+W+LG + +M+ G P+
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPPY 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 14/202 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS V A +G + A+K MD + K+ + + E +++ H VV ++ +
Sbjct: 29 GEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E EGG L D I + ++E++ V+ AL +H+ G+IHRDIK
Sbjct: 86 YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKS 144
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPAT 233
+++LLT DG +K++DFG + +P + VGT ++ PE+++ P
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKE----VP------RRKXLVGTPYWMAPELISRLPYG 194
Query: 234 FGNDLWALGCTLYQMLSGTSPF 255
D+W+LG + +M+ G P+
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPPY 216
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 123/249 (49%), Gaps = 23/249 (9%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQ 101
++ +EL K G G+Y V ++ TG V A+K K F +N T + E ++L +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVK---KIFDAFQNSTDAQRTFREIMILTE 64
Query: 102 LD-HPGVVRLFFTFQ--DTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L H +V L + + +Y+ + E + L ++ +++ +
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVYQLIKVI 122
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR-------ITVLPNAAS--D 209
+Y+HS GL+HRD+KP N+LL A+ H+K+ADFG + + R +++ N + D
Sbjct: 123 KYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 210 DK--ACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQR 266
D+ +V T Y PE+ L S+ T G D+W+LGC L ++L G F +S +R
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER 242
Query: 267 IIARDIRFP 275
II I FP
Sbjct: 243 IIGV-IDFP 250
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G+ V A + TG A++ M+ + ++ K + E +V+ + +P +V +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E GG L D +T + E + E + ALE++HS +IHRDIK
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 174 ENLLLTADGHIKIADFG---SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230
+N+LL DG +K+ DFG + P Q R T VGT ++ PEV+
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKR-------------STMVGTPYWMAPEVVTRK 191
Query: 231 PATFGNDLWALGCTLYQMLSGTSPF 255
D+W+LG +M+ G P+
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL---ERIVL 99
S++ +E + G GSY V++ + DTG + A+K KF+ ++ K+ E +L
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK----KFLESDDDKMVKKIAMREIKLL 78
Query: 100 DQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALE 159
QL H +V L + Y+ E + L D L + Y ++++ +
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
+ HS +IHRDIKPEN+L++ G +K+ DFG +R P DD+ V T
Sbjct: 139 FCHSHNIIHRDIKPENILVSQSGVVKLCDFGF------ARTLAAPGEVYDDE----VATR 188
Query: 220 AYVPPEVLNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSE 260
Y PE+L +G D+WA+GC + +M G F S+
Sbjct: 189 WYRAPELL-VGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 76
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 77 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 134
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 183
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 184 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 75
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 76 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 133
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 182
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 183 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 74
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 75 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 132
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 181
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 182 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 27/222 (12%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+E+ + G G + V+R DTG A+K ++ ++ +N+ + LE ++ +L+HP
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK-QCRQELSPKNRERWC-LEIQIMKKLNHPN 74
Query: 107 VVRLFFTFQDTFSL------YMALESCEGGEL---FDQITSKGHLSEDEARFYTAEVVDA 157
VV L +A+E CEGG+L +Q + L E R +++ A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI---KIADFGSVKPMQDSRITVLPNAASDDKACT 214
L Y+H +IHRD+KPEN++L KI D G K + + CT
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL------------CT 182
Query: 215 -FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
FVGT Y+ PE+L T D W+ G ++ ++G PF
Sbjct: 183 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 27/222 (12%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
+E+ + G G + V+R DTG A+K ++ ++ +N+ + LE ++ +L+HP
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIK-QCRQELSPKNRERWC-LEIQIMKKLNHPN 73
Query: 107 VVRLFFTFQDTFSL------YMALESCEGGEL---FDQITSKGHLSEDEARFYTAEVVDA 157
VV L +A+E CEGG+L +Q + L E R +++ A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI---KIADFGSVKPMQDSRITVLPNAASDDKACT 214
L Y+H +IHRD+KPEN++L KI D G K + + CT
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL------------CT 181
Query: 215 -FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
FVGT Y+ PE+L T D W+ G ++ ++G PF
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 69
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 70 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 127
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 176
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 177 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 68
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 69 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 175
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 176 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 84
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 85 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 142
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 191
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 192 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH-PGVV 108
K G G ++ V + TG YA K + K+ ++ + A + E VL+ P V+
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCR-AEILHEIAVLELAKSCPRVI 92
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGL 166
L +++T + + LE GGE+F + +SE++ ++++ + Y+H +
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI 152
Query: 167 IHRDIKPENLLLTAD---GHIKIADFGSVKPMQDSRITVLPNAASDDKACTF---VGTAA 220
+H D+KP+N+LL++ G IKI DFG + + AC +GT
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--------------GHACELREIMGTPE 198
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
Y+ PE+LN P T D+W +G Y +L+ TSPF
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 120
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 121 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 227
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 228 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 70
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 71 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 177
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 178 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 114
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 115 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 221
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 222 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 70
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 71 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 177
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 178 TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 22/218 (10%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
H++ LG+ GS+ +V R + TG A+K + + E E +
Sbjct: 74 HWATHQLRLGR----GSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE--------ELMACA 121
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
L P +V L+ ++ + + +E EGG L + +G L ED A +Y + ++ LEY
Sbjct: 122 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEY 181
Query: 161 IHSMGLIHRDIKPENLLLTADG-HIKIADFGSVKPMQDSRITVLPNAASDD--KACTFVG 217
+HS ++H D+K +N+LL++DG H + DFG + + P+ D G
Sbjct: 182 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHA-------VCLQPDGLGKDLLTGDYIPG 234
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T ++ PEV+ D+W+ C + ML+G P+
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
D+EL ++ G G+ + VV+A K+ K+ ++ +T+ +L E + Q
Sbjct: 11 DYELQEVIGSGA-TAVVQAAYCAPKKE---KVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFD---QITSKGH-----LSEDEARFYTAEVV 155
HP +V + +F L++ ++ GG + D I +KG L E EV+
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ LEY+H G IHRD+K N+LL DG ++IADFG + + + + TF
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV-----SAFLATGGDITRNKVRKTF 181
Query: 216 VGTAAYVPPEVLNSSPA-TFGNDLWALGCTLYQMLSGTSPF 255
VGT ++ PEV+ F D+W+ G T ++ +G +P+
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 20/221 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
D+EL ++ G G+ + VV+A K+ K+ ++ +T+ +L E + Q
Sbjct: 16 DYELQEVIGSGA-TAVVQAAYCAPKKE---KVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFD---QITSKGH-----LSEDEARFYTAEVV 155
HP +V + +F L++ ++ GG + D I +KG L E EV+
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ LEY+H G IHRD+K N+LL DG ++IADFG + + + + TF
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV-----SAFLATGGDITRNKVRKTF 186
Query: 216 VGTAAYVPPEVLNSSPA-TFGNDLWALGCTLYQMLSGTSPF 255
VGT ++ PEV+ F D+W+ G T ++ +G +P+
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 28/216 (12%)
Query: 106 GVVRLFFTFQDTFSLYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164
GV+RL F+ S + LE E +LFD IT +G L E+ AR + +V++A+ + H+
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 165 GLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
G++HRDIK EN+L+ + G +K+ DFGS ++D+ T F GT Y P
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT------------DFDGTRVYSP 224
Query: 224 PEVLNSSPATFGND--LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSXX 281
PE + G +W+LG LY M+ G PF+ E II + F S
Sbjct: 225 PEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQRVSSE 277
Query: 282 XXXXXXXXXXXXPSGRPGAGPGGYAVLKMHPFFKGI 317
PS RP + ++ HP+ + +
Sbjct: 278 CQHLIRWCLALRPSDRP-----TFEEIQNHPWMQDV 308
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G+ V A + TG A++ M+ + ++ K + E +V+ + +P +V +
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E GG L D +T + E + E + ALE++HS +IHR+IK
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVIHRNIKS 145
Query: 174 ENLLLTADGHIKIADFG---SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230
+N+LL DG +K+ DFG + P Q R T VGT ++ PEV+
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKR-------------STMVGTPYWMAPEVVTRK 192
Query: 231 PATFGNDLWALGCTLYQMLSGTSPF 255
D+W+LG +M+ G P+
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G+ V A + TG A++ M+ + ++ K + E +V+ + +P +V +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E GG L D +T + E + E + ALE++HS +IHRDIK
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 174 ENLLLTADGHIKIADFG---SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230
+N+LL DG +K+ DFG + P Q R VGT ++ PEV+
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKR-------------SXMVGTPYWMAPEVVTRK 191
Query: 231 PATFGNDLWALGCTLYQMLSGTSPF 255
D+W+LG +M+ G P+
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G+ V A + TG A++ M+ + ++ K + E +V+ + +P +V +
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E GG L D +T + E + E + ALE++HS +IHRDIK
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 145
Query: 174 ENLLLTADGHIKIADFG---SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230
+N+LL DG +K+ DFG + P Q R VGT ++ PEV+
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKR-------------SXMVGTPYWMAPEVVTRK 192
Query: 231 PATFGNDLWALGCTLYQMLSGTSPF 255
D+W+LG +M+ G P+
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 20/205 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G+ V A + TG A++ M+ + ++ K + E +V+ + +P +V +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ L++ +E GG L D +T + E + E + ALE++HS +IHRDIK
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 174 ENLLLTADGHIKIADFG---SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230
+N+LL DG +K+ DFG + P Q R VGT ++ PEV+
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKR-------------SEMVGTPYWMAPEVVTRK 191
Query: 231 PATFGNDLWALGCTLYQMLSGTSPF 255
D+W+LG +M+ G P+
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 21/221 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V + + +G A+K + + F + K Y +L +L + H V+ L
Sbjct: 60 GSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 117
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 177
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 178 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 224
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRII 268
N D+W++GC + ++L+G + F T Q+I+
Sbjct: 225 NWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIM 265
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD 100
H++ LG+ GS+ +V R + TG A+K + + E E +
Sbjct: 93 HWATHQLRLGR----GSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE--------ELMACA 140
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
L P +V L+ ++ + + +E EGG L + +G L ED A +Y + ++ LEY
Sbjct: 141 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEY 200
Query: 161 IHSMGLIHRDIKPENLLLTADG-HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
+HS ++H D+K +N+LL++DG H + DFG +Q + S GT
Sbjct: 201 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL-----GKSLLTGDYIPGTE 255
Query: 220 AYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
++ PEV+ D+W+ C + ML+G P+
Sbjct: 256 THMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 28/222 (12%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 68
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 69 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S +
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLT 175
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T YV PEVL D+W+LG +Y +L G PF
Sbjct: 176 EPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 24/223 (10%)
Query: 44 IQDFE-LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D E LG++ G G+ +V + + TG V A+K M + +ENK + L+ +VL
Sbjct: 24 INDLENLGEM-GSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLD-VVLKSH 81
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEY 160
D P +V+ F TF +++A+E G +++ + G + E T +V AL Y
Sbjct: 82 DCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYY 139
Query: 161 I-HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
+ G+IHRD+KP N+LL G IK+ DFG + D + A D A G A
Sbjct: 140 LKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK-------AKDRSA----GCA 188
Query: 220 AYVPPEVLNSSPAT-----FGNDLWALGCTLYQMLSGTSPFKD 257
AY+ PE ++ T D+W+LG +L ++ +G P+K+
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDSELKILDFGLCR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 27 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 84
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 144
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ FV T Y PE+ L
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMAGFVATRWYRAPEIML 191
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS+ +V R K TG A+K + + E E + L P +V L+
Sbjct: 81 GRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGLSSPRIVPLYGA 132
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
++ + + +E EGG L I G L ED A +Y + ++ LEY+H+ ++H D+K
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 192
Query: 174 ENLLLTADG-HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPA 232
+N+LL++DG + DFG +Q + S GT ++ PEV+ P
Sbjct: 193 DNVLLSSDGSRAALCDFGHALCLQPDGL-----GKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 233 TFGNDLWALGCTLYQMLSGTSPF 255
D+W+ C + ML+G P+
Sbjct: 248 DAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N+ D+W++GC + ++L+G + F T
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ FV T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMAGFVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ FV T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMAGFVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS+ +V R K TG A+K + + E E + L P +V L+
Sbjct: 83 GRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGLSSPRIVPLYGA 134
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
++ + + +E EGG L I G L ED A +Y + ++ LEY+H+ ++H D+K
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 194
Query: 174 ENLLLTADG-HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPA 232
+N+LL++DG + DFG +Q + S GT ++ PEV+ P
Sbjct: 195 DNVLLSSDGSRAALCDFGHALCLQPDGL-----GKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 233 TFGNDLWALGCTLYQMLSGTSPF 255
D+W+ C + ML+G P+
Sbjct: 250 DAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + K F + K Y +L +L + H V+ L
Sbjct: 43 GSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 100
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 160
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 161 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 207
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 14/203 (6%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS+ +V R K TG A+K + + E E + L P +V L+
Sbjct: 67 GRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGLSSPRIVPLYGA 118
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
++ + + +E EGG L I G L ED A +Y + ++ LEY+H+ ++H D+K
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKA 178
Query: 174 ENLLLTADG-HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPA 232
+N+LL++DG + DFG +Q + + + D GT ++ PEV+ P
Sbjct: 179 DNVLLSSDGSRAALCDFGHALCLQPDGLG--KSLLTGD---YIPGTETHMAPEVVMGKPC 233
Query: 233 TFGNDLWALGCTLYQMLSGTSPF 255
D+W+ C + ML+G P+
Sbjct: 234 DAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDXELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 52 IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLF 111
+ G G++++V + T YA+KI++K+ ++ + ++E + Q H V+ L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-FREVEMLYQCQ-GHRNVLELI 77
Query: 112 FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDI 171
F++ Y+ E GG + I + H +E EA +V AL+++H+ G+ HRD+
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 172 KPENLLLTADGH---IKIADFG---SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPE 225
KPEN+L +KI DFG +K D P T G+A Y+ PE
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELL------TPCGSAEYMAPE 191
Query: 226 VLN--SSPATFGN---DLWALGCTLYQMLSGTSPF 255
V+ S A+ + DLW+LG LY +LSG PF
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 33/227 (14%)
Query: 50 GKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
G+IY G G SKV + + +YA+K ++ + + +Y + E L++L
Sbjct: 8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQ 65
Query: 104 HPG--VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
++RL+ + D + +YM +E C +L + K + E + Y +++A+
Sbjct: 66 QHSDKIIRLYDYEITDQY-IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 123
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
IH G++H D+KP N L+ DG +K+ DFG MQ +V+ ++ VGT
Sbjct: 124 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ--------VGTVN 174
Query: 221 YVPPEVLNSSPATFGN-----------DLWALGCTLYQMLSGTSPFK 256
Y+PPE + ++ N D+W+LGC LY M G +PF+
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 221
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 33/227 (14%)
Query: 50 GKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
G+IY G G SKV + + +YA+K ++ + + +Y + E L++L
Sbjct: 27 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQ 84
Query: 104 HPG--VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
++RL+ + D + +YM +E C +L + K + E + Y +++A+
Sbjct: 85 QHSDKIIRLYDYEITDQY-IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
IH G++H D+KP N L+ DG +K+ DFG MQ +V+ ++ VGT
Sbjct: 143 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ--------VGTVN 193
Query: 221 YVPPEVLNSSPATFGN-----------DLWALGCTLYQMLSGTSPFK 256
Y+PPE + ++ N D+W+LGC LY M G +PF+
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 33/227 (14%)
Query: 50 GKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
G+IY G G SKV + + +YA+K ++ + + +Y + E L++L
Sbjct: 55 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQ 112
Query: 104 HPG--VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
++RL+ + D + +YM +E C +L + K + E + Y +++A+
Sbjct: 113 QHSDKIIRLYDYEITDQY-IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
IH G++H D+KP N L+ DG +K+ DFG MQ +V+ ++ VGT
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ--------VGTVN 221
Query: 221 YVPPEVLNSSPATFGN-----------DLWALGCTLYQMLSGTSPFK 256
Y+PPE + ++ N D+W+LGC LY M G +PF+
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 27 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 84
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIH 144
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 191
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 37 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 94
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 154
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 155 RDLKPSNLAVNEDSELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 201
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 90
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 150
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 151 RDLKPSNLAVNEDSELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 197
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 33/227 (14%)
Query: 50 GKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
G+IY G G SKV + + +YA+K ++ + + +Y + E L++L
Sbjct: 11 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQ 68
Query: 104 HPG--VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
++RL+ + D + +YM +E C +L + K + E + Y +++A+
Sbjct: 69 QHSDKIIRLYDYEITDQY-IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 126
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
IH G++H D+KP N L+ DG +K+ DFG MQ +V+ ++ VGT
Sbjct: 127 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ--------VGTVN 177
Query: 221 YVPPEVLNSSPATFGN-----------DLWALGCTLYQMLSGTSPFK 256
Y+PPE + ++ N D+W+LGC LY M G +PF+
Sbjct: 178 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 224
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 33/227 (14%)
Query: 50 GKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
G+IY G G SKV + + +YA+K ++ + + +Y + E L++L
Sbjct: 7 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQ 64
Query: 104 HPG--VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
++RL+ + D + +YM +E C +L + K + E + Y +++A+
Sbjct: 65 QHSDKIIRLYDYEITDQY-IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 122
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
IH G++H D+KP N L+ DG +K+ DFG MQ +V+ ++ VGT
Sbjct: 123 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ--------VGTVN 173
Query: 221 YVPPEVLNSSPATFGN-----------DLWALGCTLYQMLSGTSPFK 256
Y+PPE + ++ N D+W+LGC LY M G +PF+
Sbjct: 174 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 220
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 33/227 (14%)
Query: 50 GKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
G+IY G G SKV + + +YA+K ++ + + +Y + E L++L
Sbjct: 55 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQ 112
Query: 104 HPG--VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
++RL+ + D + +YM +E C +L + K + E + Y +++A+
Sbjct: 113 QHSDKIIRLYDYEITDQY-IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
IH G++H D+KP N L+ DG +K+ DFG MQ +V+ ++ VGT
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ--------VGTVN 221
Query: 221 YVPPEVLNSSPATFGN-----------DLWALGCTLYQMLSGTSPFK 256
Y+PPE + ++ N D+W+LGC LY M G +PF+
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 42 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 99
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 159
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 160 RDLKPSNLAVNEDXELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 206
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 29 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 86
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 146
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 147 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 193
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 93
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 153
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 154 RDLKPSNLAVNEDXELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 200
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 43 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 100
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 160
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 161 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 207
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 43 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 100
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 160
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 161 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 207
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 51 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 108
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 168
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 169 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 215
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 54 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 111
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 171
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 172 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 218
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 50 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 107
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 167
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 168 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 214
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 51 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 108
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 168
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 169 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 215
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 90
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 150
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 151 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 197
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 93
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 153
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 154 RDLKPSNLAVNEDXELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 200
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 90
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 150
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 151 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 197
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 27 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 84
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 144
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 191
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 42 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 99
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 159
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 160 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 206
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 27 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 84
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 144
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 145 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 191
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 28 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 85
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 145
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 146 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 192
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 33/227 (14%)
Query: 50 GKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
G+IY G G SKV + + +YA+K ++ + + +Y + E L++L
Sbjct: 27 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQ 84
Query: 104 HPG--VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
++RL+ + D + +YM +E C +L + K + E + Y +++A+
Sbjct: 85 QHSDKIIRLYDYEITDQY-IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
IH G++H D+KP N L+ DG +K+ DFG MQ V+ ++ VGT
Sbjct: 143 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQ--------VGTVN 193
Query: 221 YVPPEVLNSSPATFGN-----------DLWALGCTLYQMLSGTSPFK 256
Y+PPE + ++ N D+W+LGC LY M G +PF+
Sbjct: 194 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 240
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 93
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 153
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 154 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 200
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 36 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 93
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 153
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 154 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 200
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 30 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 87
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 147
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 148 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 194
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 95
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 155
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 156 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 202
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 28 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 85
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 145
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 146 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 192
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 37 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 94
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 154
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 155 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 201
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 50 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 107
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 167
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 168 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 214
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 37 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 94
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 154
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 155 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 201
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 33 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 90
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 150
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 151 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 197
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 41 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 98
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 158
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 159 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 205
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 236
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 43/235 (18%)
Query: 38 PQEHFSIQDFELGK-IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
P+++ D++L K + G+G KV+ TG ALK++ ++
Sbjct: 2 PKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ---------- 51
Query: 97 IVLDQLDH-------PGVVRLFFTFQDTF----SLYMALESCEGGELFDQITSKGH--LS 143
++DH P +V + +++ L + +E EGGELF +I +G +
Sbjct: 52 ----EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFT 107
Query: 144 EDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRI 200
E EA ++ A++++HS + HRD+KPENLL T+ D +K+ DFG K + +
Sbjct: 108 EREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL 167
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T T YV PEVL D+W+LG +Y +L G PF
Sbjct: 168 Q------------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 37 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 94
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 154
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 155 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIML 201
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 47/260 (18%)
Query: 38 PQEHFSIQDFELGK-IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
P+++ D++L K + G+G KV+ TG ALK++ ++
Sbjct: 21 PKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ---------- 70
Query: 97 IVLDQLDH-------PGVVRLFFTFQDTF----SLYMALESCEGGELFDQITSKGH--LS 143
++DH P +V + +++ L + +E EGGELF +I +G +
Sbjct: 71 ----EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFT 126
Query: 144 EDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRI 200
E EA ++ A++++HS + HRD+KPENLL T+ D +K+ DFG K + +
Sbjct: 127 EREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL 186
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
T T YV PEVL D+W+LG +Y +L G PF +
Sbjct: 187 Q------------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG 234
Query: 261 WLIF----QRIIARDIRFPN 276
I +RI FPN
Sbjct: 235 QAISPGMKRRIRLGQYGFPN 254
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 54 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 111
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 171
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ +V T Y PE+ L
Sbjct: 172 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMXGYVATRWYRAPEIML 218
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 105 PGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDAL 158
P +VR+ +++ ++ L + E +GGELF +I +G +E EA + +A+
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAI 174
Query: 159 EYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+Y+HS+ + HRD+KPENLL T+ + +K+ DFG K S + T
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----------ETTSHNSLTTP 223
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
T YV PEVL D W+LG Y +L G PF
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 110
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + + PN +++
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNV-------SYI 217
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 76
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN +++
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNV-------SYI 183
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 114
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + + PN +++
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNV-------SYI 221
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 222 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 112
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + + PN +++
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNV-------SYI 219
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 220 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 104
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + + PN +++
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNV-------SYI 211
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 212 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 89
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN +++
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNV-------SYI 196
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 197 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI D+G + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDYGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 155
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + + PN +++
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNV-------SYI 262
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 263 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 81
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN +++
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNV-------SYI 188
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 189 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 33/227 (14%)
Query: 50 GKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
G+IY G G SKV + + +YA+K ++ + + +Y + E L++L
Sbjct: 55 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSY-RNEIAYLNKLQ 112
Query: 104 HPG--VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
++RL+ + D + +YM +E C +L + K + E + Y +++A+
Sbjct: 113 QHSDKIIRLYDYEITDQY-IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
IH G++H D+KP N L+ DG +K+ DFG MQ +V+ ++ VG
Sbjct: 171 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQ--------VGAVN 221
Query: 221 YVPPEVLNSSPATFGN-----------DLWALGCTLYQMLSGTSPFK 256
Y+PPE + ++ N D+W+LGC LY M G +PF+
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 52 IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLF 111
+ G G++++V + T YA+KI++K+ ++ + ++E + Q H V+ L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV-FREVEMLYQCQ-GHRNVLELI 77
Query: 112 FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDI 171
F++ Y+ E GG + I + H +E EA +V AL+++H+ G+ HRD+
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 172 KPENLLLTADGH---IKIADF---GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPE 225
KPEN+L +KI DF +K D P T G+A Y+ PE
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL------TPCGSAEYMAPE 191
Query: 226 VLN--SSPATFGN---DLWALGCTLYQMLSGTSPF 255
V+ S A+ + DLW+LG LY +LSG PF
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 76
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN + +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSX-------I 183
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE-NKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F ++ K AY +L +L + H V+ L
Sbjct: 34 GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELR--LLKHMRHENVIGLLD 91
Query: 113 TFQ-----DTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLI 167
F D F+ + + G +L ++ L ED +F +++ L YIH+ G+I
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDL-GKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII 150
Query: 168 HRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV- 226
HRD+KP NL + D +KI DFG + +D + V T Y PEV
Sbjct: 151 HRDLKPGNLAVNEDCELKILDFGLAR-------------QADSEMXGXVVTRWYRAPEVI 197
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPFK 256
LN T D+W++GC + +M++G + FK
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGKTLFK 227
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMTGXVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 51 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 108
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 168
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + +DD+ V T Y PE+ L
Sbjct: 169 RDLKPSNLAVNEDCELKILDFGLAR-------------HTDDEMXGXVATRWYRAPEIML 215
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 37/224 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 80
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN + +
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSX-------I 187
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ Y PE + ++ T D+W+ GC L ++L G F S
Sbjct: 188 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 76
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN + +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSX-------I 183
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 77
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN + +
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSX-------I 184
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 185 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 76
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN + +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSX-------I 183
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 88
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN + +
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSX-------I 195
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 196 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 84
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN + +
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSX-------I 191
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 192 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 26/240 (10%)
Query: 28 QRSKSFAFRAPQE---HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT 84
QR + AF ++ DFE G G+ V + +G V M +K I
Sbjct: 5 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLV-----MARKLIH 59
Query: 85 KENKTAY---VKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK-G 140
E K A + E VL + + P +V + F + + +E +GG L DQ+ K G
Sbjct: 60 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAG 118
Query: 141 HLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199
+ E + V+ L Y+ ++HRD+KP N+L+ + G IK+ DFG + DS
Sbjct: 119 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 178
Query: 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
A +FVGT +Y+ PE L + + +D+W++G +L +M G P S
Sbjct: 179 ------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGS 226
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 95
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN + +
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSX-------I 202
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 203 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 110
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + + PN + +
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNVSX-------I 217
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 37/220 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + DK+F +E + ++ +LDH +V
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ---------IMRKLDHCNIV 88
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + + PN + +
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL----VRGEPNVSX-------I 195
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ Y PE + ++ T D+W+ GC L ++L G F
Sbjct: 196 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY---VKLERIVLDQL 102
DFE G G+ V + +G V M +K I E K A + E VL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLV-----MARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
+ P +V + F + + +E +GG L + G + E + V+ L Y+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 163 S-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
++HRD+KP N+L+ + G IK+ DFG + DS A +FVGT +Y
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM------------ANSFVGTRSY 169
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ PE L + + +D+W++G +L +M G P
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 28 QRSKSFAFRAPQE---HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT 84
QR + AF ++ DFE G G+ V + +G V A +K I
Sbjct: 13 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-----RKLIH 67
Query: 85 KENKTAY---VKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH 141
E K A + E VL + + P +V + F + + +E +GG L + G
Sbjct: 68 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR 127
Query: 142 LSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200
+ E + V+ L Y+ ++HRD+KP N+L+ + G IK+ DFG + DS
Sbjct: 128 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 186
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
A +FVGT +Y+ PE L + + +D+W++G +L +M G P
Sbjct: 187 -----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 24/235 (10%)
Query: 28 QRSKSFAFRAPQE---HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT 84
QR + AF ++ DFE G G+ V + +G V M +K I
Sbjct: 48 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLV-----MARKLIH 102
Query: 85 KENKTAY---VKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH 141
E K A + E VL + + P +V + F + + +E +GG L + G
Sbjct: 103 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR 162
Query: 142 LSEDEARFYTAEVVDALEYIHSM-GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200
+ E + V+ L Y+ ++HRD+KP N+L+ + G IK+ DFG + DS
Sbjct: 163 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 221
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
A +FVGT +Y+ PE L + + +D+W++G +L +M G P
Sbjct: 222 -----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY---VKLERIVLDQL 102
DFE G G+ V + +G V M +K I E K A + E VL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLV-----MARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
+ P +V + F + + +E +GG L + G + E + V+ L Y+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 163 S-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
++HRD+KP N+L+ + G IK+ DFG + DS A +FVGT +Y
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM------------ANSFVGTRSY 169
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ PE L + + +D+W++G +L +M G P
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY---VKLERIVLDQL 102
DFE G G+ V + +G V M +K I E K A + E VL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLV-----MARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
+ P +V + F + + +E +GG L + G + E + V+ L Y+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 163 S-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
++HRD+KP N+L+ + G IK+ DFG + DS A +FVGT +Y
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM------------ANSFVGTRSY 169
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ PE L + + +D+W++G +L +M G P
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALE--SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
+HP +V+L LY+ E S + + D G + + Y +++ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAF 121
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKAC 213
HS ++HRD+KPENLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 182 KYYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 95
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 155
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + + D+ +V T Y PE+ L
Sbjct: 156 RDLKPSNLAVNEDCELKILDFGLAR-------------HTADEMTGYVATRWYRAPEIML 202
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY---VKLERIVLDQL 102
DFE G G+ V + +G V M +K I E K A + E VL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLV-----MARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
+ P +V + F + + +E +GG L + G + E + V+ L Y+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 163 S-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
++HRD+KP N+L+ + G IK+ DFG + DS A +FVGT +Y
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM------------ANSFVGTRSY 169
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ PE L + + +D+W++G +L +M G P
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY---VKLERIVLDQL 102
DFE G G+ V + +G V M +K I E K A + E VL +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLV-----MARKLIHLEIKPAIRNQIIRELQVLHEC 61
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
+ P +V + F + + +E +GG L + G + E + V+ L Y+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 163 S-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
++HRD+KP N+L+ + G IK+ DFG + DS A +FVGT +Y
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM------------ANSFVGTRSY 169
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ PE L + + +D+W++G +L +M G P
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 103 DHPGVVRLFFTFQDTFSLYMALE--SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
+HP +V+L LY+ E S + + D G + + Y +++ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG-IPLPLIKSYLFQLLQGLAF 119
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKAC 213
HS ++HRD+KPENLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 180 KYYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 95
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 155
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + + D+ +V T Y PE+ L
Sbjct: 156 RDLKPSNLAVNEDCELKILDFGLAR-------------HTADEMTGYVATRWYRAPEIML 202
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI FG + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILGFGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 38 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 95
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 155
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DFG + + D+ +V T Y PE+ L
Sbjct: 156 RDLKPSNLAVNEDCELKILDFGLAR-------------HTADEMTGYVATRWYRAPEIML 202
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 18/214 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIM---DKKFITKENKTAYVKLERI-VLDQ 101
DF+L + G G+Y V A TG + A+K + DK A L I +L
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF------ALRTLREIKILKH 65
Query: 102 LDHPGVVRLFF-----TFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
H ++ +F +F++ +Y+ E + ++ S LS+D +++ + +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
A++ +H +IHRD+KP NLL+ ++ +K+ DFG + + +S FV
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 217 GTAAYVPPEV-LNSSPATFGNDLWALGCTLYQML 249
T Y PEV L S+ + D+W+ GC L ++
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI D G + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDAGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI D G + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDRGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
L I G G+ + V R + TG ++A+K+ + + + E VL +L+H +V
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE--VLKKLNHKNIV 70
Query: 109 RLFFTFQDTFSLY--MALESCEGGELFDQITSKGH---LSEDEARFYTAEVVDALEYIHS 163
+LF ++T + + + +E C G L+ + + L E E +VV + ++
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 164 MGLIHRDIKPENLL--LTADGH--IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
G++HR+IKP N++ + DG K+ DFG+ + ++D D++ + GT
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED-----------DEQFVSLYGTE 179
Query: 220 AYVPPEVLNSS------PATFGN--DLWALGCTLYQMLSGTSPFK 256
Y+ P++ + +G DLW++G T Y +G+ PF+
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 23/192 (11%)
Query: 81 KFITKEN----------KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG 130
KFI KE K V LE +L +++H ++++ F++ + +E G
Sbjct: 55 KFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG 114
Query: 131 -ELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADF 189
+LF I L E A + ++V A+ Y+ +IHRDIK EN+++ D IK+ DF
Sbjct: 115 LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Query: 190 GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGN-DLWALGCTLYQM 248
GS ++ ++ TF GT Y PEVL +P ++W+LG TLY +
Sbjct: 175 GSAAYLERGKLFY-----------TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL 223
Query: 249 LSGTSPFKDTSE 260
+ +PF + E
Sbjct: 224 VFEENPFCELEE 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 29/219 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
+G+ G GS+ V + K G V A+K+++ T + A+ K E VL + H ++
Sbjct: 16 VGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 71
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD-------ALEYI 161
LF + L + + CEG L+ HL E +F +++D ++Y+
Sbjct: 72 -LFMGYSTKPQLAIVTQWCEGSSLYH------HLHASETKFEMKKLIDIARQTARGMDYL 124
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H+ +IHRD+K N+ L D +KI DFG TV + + G+ +
Sbjct: 125 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA--------TVKSRWSGSHQFEQLSGSILW 176
Query: 222 VPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
+ PEV+ +S+P +F +D++A G LY++++G P+ +
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 215
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 23/209 (11%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A A+K + + F + + Y +L +L L H V+ L
Sbjct: 37 GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELR--LLKHLKHENVIGLLD 94
Query: 113 TFQ-----DTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLI 167
F + FS + + G +L + + S+ LS++ +F +++ L+YIHS G+I
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA-LSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 168 HRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV- 226
HRD+KP N+ + D ++I DFG + +D++ +V T Y PE+
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLAR-------------QADEEMTGYVATRWYRAPEIM 200
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPF 255
LN D+W++GC + ++L G + F
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI D G + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDGGLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 21/211 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A TG A+K + + F + K Y +L +L + H V+ L
Sbjct: 31 GSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR--LLKHMKHENVIGLLD 88
Query: 113 TFQDTFSLY----MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
F SL + L + G + I L++D +F +++ L+YIHS +IH
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-L 227
RD+KP NL + D +KI DF + +DD+ +V T Y PE+ L
Sbjct: 149 RDLKPSNLAVNEDCELKILDFYLAR-------------HTDDEMTGYVATRWYRAPEIML 195
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDT 258
N D+W++GC + ++L+G + F T
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY---VKLERIVLDQL 102
DFE G G+ V + +G V M +K I E K A + E VL +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLV-----MARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
+ P +V + F + + +E +GG L + G + E + V+ L Y+
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 163 S-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
++HRD+KP N+L+ + G IK+ DFG + D+ A FVGT +Y
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGEIKLCDFG------------VSGQLIDEMANEFVGTRSY 172
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSP 254
+ PE L + + +D+W++G +L +M G P
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALE--SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
+HP +V+L LY+ E S + + D G + + Y +++ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAF 121
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKAC 213
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 182 KYYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G + V R + + Y K + K VK E +L+ H ++ L +
Sbjct: 14 GRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 114 FQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIK 172
F+ L M E G ++F++I TS L+E E Y +V +AL+++HS + H DI+
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIR 129
Query: 173 PENLLLTA--DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230
PEN++ IKI +FG + ++ D+ F Y PEV
Sbjct: 130 PENIIYQTRRSSTIKIIEFGQARQLK----------PGDNFRLLFTA-PEYYAPEVHQHD 178
Query: 231 PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF 274
+ D+W+LG +Y +LSG +PF + I + I+ + F
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF 222
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGG-ELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 183 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 103 DHPGVVRLFFTFQDTFSLYMALE--SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
+HP +V+L LY+ E S + + D G + + Y +++ L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG-IPLPLIKSYLFQLLQGLAF 120
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKAC 213
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 181 KYYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
L I G G+ + V R + TG ++A+K+ + + + E VL +L+H +V
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE--VLKKLNHKNIV 70
Query: 109 RLFFTFQDTFSLY--MALESCEGGELF---DQITSKGHLSEDEARFYTAEVVDALEYIHS 163
+LF ++T + + + +E C G L+ ++ ++ L E E +VV + ++
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 164 MGLIHRDIKPENLL--LTADGH--IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
G++HR+IKP N++ + DG K+ DFG+ + ++D D++ GT
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED-----------DEQFVXLYGTE 179
Query: 220 AYVPPEVLNSS------PATFGN--DLWALGCTLYQMLSGTSPFK 256
Y+ P++ + +G DLW++G T Y +G+ PF+
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KPENLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 182 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KPENLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 181 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 18/214 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIM---DKKFITKENKTAYVKLERI-VLDQ 101
DF+L + G G+Y V A TG + A+K + DK A L I +L
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF------ALRTLREIKILKH 65
Query: 102 LDHPGVVRLFF-----TFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
H ++ +F +F++ +Y+ E + ++ S LS+D +++ + +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
A++ +H +IHRD+KP NLL+ ++ +K+ DFG + + +S +V
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 217 GTAAYVPPEV-LNSSPATFGNDLWALGCTLYQML 249
T Y PEV L S+ + D+W+ GC L ++
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 29/220 (13%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
++ E+ ++ G G++ V +AK + K + K I E++ +E L +++H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAK-------WRAKDVAIKQIESESERKAFIVELRQLSRVNH 61
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHL---SEDEARFYTAEVVDALEYI 161
P +V+L+ + L M E EGG L++ + L + A + + + Y+
Sbjct: 62 PNIVKLYGACLNPVCLVM--EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 162 HSM---GLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
HSM LIHRD+KP NLLL A G + KI DFG+ +Q +++K G
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ--------THMTNNK-----G 166
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
+AA++ PEV S + D+++ G L+++++ PF +
Sbjct: 167 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 206
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 29/220 (13%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
++ E+ ++ G G++ V +AK + K + K I E++ +E L +++H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAK-------WRAKDVAIKQIESESERKAFIVELRQLSRVNH 60
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHL---SEDEARFYTAEVVDALEYI 161
P +V+L+ + L M E EGG L++ + L + A + + + Y+
Sbjct: 61 PNIVKLYGACLNPVCLVM--EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 162 HSM---GLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
HSM LIHRD+KP NLLL A G + KI DFG+ +Q +++K G
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ--------THMTNNK-----G 165
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
+AA++ PEV S + D+++ G L+++++ PF +
Sbjct: 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + K F +E + ++ +LDH +V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ---------IMRKLDHCNIV 76
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN +++
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNV-------SYI 183
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ Y PE + ++ T D+W+ GC L ++L G F S
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + K F +E + ++ +LDH +V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ---------IMRKLDHCNIV 76
Query: 109 RLFFTF------QDTFSLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ E ++ +K L + Y ++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN +++
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNV-------SYI 183
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ Y PE + ++ T D+W+ GC L ++L G F S
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 183 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KPENLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 180 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 15/212 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
++E+ + G G+Y V A++ TG A+K + F N ++ E +L H
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHD 114
Query: 106 GVVRLFFTFQDTF------SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALE 159
++ + + T S+Y+ L+ E +L I S L+ + R++ +++ L+
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLK 173
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
Y+HS +IHRD+KP NLL+ + +KI DFG + + S A +V T
Sbjct: 174 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS------PAEHQYFMTEYVATR 227
Query: 220 AYVPPEVLNS-SPATFGNDLWALGCTLYQMLS 250
Y PE++ S T DLW++GC +ML+
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 15/217 (6%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
++E+ + G G+Y V A++ TG A+K + F N ++ E +L H
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHD 113
Query: 106 GVVRLFFTFQDTF------SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALE 159
++ + + T S+Y+ L+ E +L I S L+ + R++ +++ L+
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLK 172
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA 219
Y+HS +IHRD+KP NLL+ + +KI DFG + + S A +V T
Sbjct: 173 YMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS------PAEHQYFMTEYVATR 226
Query: 220 AYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPF 255
Y PE++ S T DLW++GC +ML+ F
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 23/209 (11%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A A+K + + F + + Y +L +L L H V+ L
Sbjct: 37 GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELR--LLKHLKHENVIGLLD 94
Query: 113 TFQ-----DTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLI 167
F + FS + + G +L + + + LS++ +F +++ L+YIHS G+I
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 168 HRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV- 226
HRD+KP N+ + D ++I DFG + +D++ +V T Y PE+
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLAR-------------QADEEMTGYVATRWYRAPEIM 200
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPF 255
LN D+W++GC + ++L G + F
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 183 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 182 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 61
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 182 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 211
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 62
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 183 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 212
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 31/243 (12%)
Query: 29 RSKSFAFRAPQEHFSIQDFEL--GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE 86
R K+ R + + I D ++ G+ G GS+ V + K G V A+K+++ T +
Sbjct: 18 RMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQ 74
Query: 87 NKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDE 146
A+ K E VL + H ++ LF + L + + CEG L+ HL E
Sbjct: 75 QLQAF-KNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIE 126
Query: 147 ARFYTAEVVD-------ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199
+F +++D ++Y+H+ +IHRD+K N+ L D +KI DFG
Sbjct: 127 TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA------- 179
Query: 200 ITVLPNAASDDKACTFVGTAAYVPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFK 256
TV + + G+ ++ PEV+ + +P +F +D++A G LY++++G P+
Sbjct: 180 -TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 238
Query: 257 DTS 259
+ +
Sbjct: 239 NIN 241
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 31/243 (12%)
Query: 29 RSKSFAFRAPQEHFSIQDFEL--GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE 86
R K+ R + + I D ++ G+ G GS+ V + K G V A+K+++ T +
Sbjct: 17 RMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQ 73
Query: 87 NKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDE 146
A+ K E VL + H ++ LF + L + + CEG L+ HL E
Sbjct: 74 QLQAF-KNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIE 125
Query: 147 ARFYTAEVVD-------ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199
+F +++D ++Y+H+ +IHRD+K N+ L D +KI DFG
Sbjct: 126 TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA------- 178
Query: 200 ITVLPNAASDDKACTFVGTAAYVPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFK 256
TV + + G+ ++ PEV+ + +P +F +D++A G LY++++G P+
Sbjct: 179 -TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 237
Query: 257 DTS 259
+ +
Sbjct: 238 NIN 240
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 63
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 184 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 213
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 181 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 180 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 60
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 181 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 180 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 180 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
S+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 103 DHPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
+HP +V+L LY+ E + + F ++ + + Y +++ L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACT 214
HS ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ TA D+W+LGC +M++ + F SE
Sbjct: 180 YYSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY---VKLERIVLDQL 102
DFE G G+ V + + +G IM +K I E K A + E VL +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGL-----IMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
+ P +V + F + + +E +GG L + + E+ + V+ L Y+
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 163 S-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
++HRD+KP N+L+ + G IK+ DFG + DS A +FVGT +Y
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------MANSFVGTRSY 179
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ PE L + + +D+W++G +L ++ G P
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 180 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 29/219 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
+G+ G GS+ V + K G V A+K+++ T + A+ K E VL + H ++
Sbjct: 28 VGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 83
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD-------ALEYI 161
LF + L + + CEG L+ HL E +F +++D ++Y+
Sbjct: 84 -LFMGYSTAPQLAIVTQWCEGSSLYH------HLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H+ +IHRD+K N+ L D +KI DFG T + + G+ +
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA--------TEKSRWSGSHQFEQLSGSILW 188
Query: 222 VPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
+ PEV+ +S+P +F +D++A G LY++++G P+ +
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 23/209 (11%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G+Y V A A+K + + F + + Y +L +L L H V+ L
Sbjct: 29 GSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELR--LLKHLKHENVIGLLD 86
Query: 113 TFQ-----DTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLI 167
F + FS + + G +L + I LS++ +F +++ L+YIHS G+I
Sbjct: 87 VFTPATSIEDFSEVYLVTTLMGADL-NNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGII 145
Query: 168 HRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV- 226
HRD+KP N+ + D ++I DFG + +D++ +V T Y PE+
Sbjct: 146 HRDLKPSNVAVNEDCELRILDFGLAR-------------QADEEMTGYVATRWYRAPEIM 192
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPF 255
LN D+W++GC + ++L G + F
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 29/219 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
+G+ G GS+ V + K G V A+K+++ T + A+ K E VL + H ++
Sbjct: 28 VGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 83
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD-------ALEYI 161
LF + L + + CEG L+ HL E +F +++D ++Y+
Sbjct: 84 -LFMGYSTKPQLAIVTQWCEGSSLYH------HLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H+ +IHRD+K N+ L D +KI DFG T + + G+ +
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA--------TEKSRWSGSHQFEQLSGSILW 188
Query: 222 VPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
+ PEV+ +S+P +F +D++A G LY++++G P+ +
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 18/214 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIM---DKKFITKENKTAYVKLERI-VLDQ 101
DF+L + G G+Y V A TG + A+K + DK A L I +L
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLF------ALRTLREIKILKH 65
Query: 102 LDHPGVVRLFF-----TFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
H ++ +F +F++ +Y+ E + ++ S LS+D +++ + +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
A++ +H +IHRD+KP NLL+ ++ +K+ DFG + + +S V
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 217 GTAAYVPPEV-LNSSPATFGNDLWALGCTLYQML 249
T Y PEV L S+ + D+W+ GC L ++
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 114/253 (45%), Gaps = 34/253 (13%)
Query: 39 QEHFSIQDFELG-------KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY 91
Q F Q ELG ++ G ++ V A+ + +G YALK + +E K
Sbjct: 15 QSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALK---RLLSNEEEKNRA 71
Query: 92 VKLERIVLDQLD-HPGVVRLFF----------TFQDTFSLYMALESCEGG--ELFDQITS 138
+ E + +L HP +V+ T Q F L L C+G E ++ S
Sbjct: 72 IIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTEL--CKGQLVEFLKKMES 129
Query: 139 KGHLSEDEARFYTAEVVDALEYIHSMG--LIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196
+G LS D + A++++H +IHRD+K ENLLL+ G IK+ DFGS +
Sbjct: 130 RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
Query: 197 ---DSRITVLPNAASDDKACTFVGTAAYVPPEVLN---SSPATFGNDLWALGCTLYQMLS 250
D + A +++ T T Y PE+++ + P D+WALGC LY +
Sbjct: 190 HYPDYSWSAQRRALVEEEI-TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF 248
Query: 251 GTSPFKDTSEWLI 263
PF+D ++ I
Sbjct: 249 RQHPFEDGAKLRI 261
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+Q +E + G G+Y V +AK +T + ALK + + E + E +L +L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELK 59
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
H +VRL L + E C+ + FD + G L + + + +++ L +
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD--SCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
HS ++HRD+KP+NLL+ +G +K+ADFG + I V +A V T Y
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLARAFG---IPVRCYSAE-------VVTLWY 167
Query: 222 VPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
PP+VL + + D+W+ GC ++ + P
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
K+ G GS+ V +AK D+G + A+K + K F +E + ++ +LDH +V
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ---------IMRKLDHCNIV 76
Query: 109 RLFFTF------QDTFSLYMALESCEG-----GELFDQITSKGHLSEDEARFYTAEVVDA 157
RL + F +D L + L+ + + +K L + Y ++ +
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSR--AKQTLPVIYVKLYMYQLFRS 134
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
L YIHS G+ HRDIKP+NLLL D + K+ DFGS K + PN + +
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----PNVSX-------I 183
Query: 217 GTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ Y PE + ++ T D+W+ GC L ++L G F S
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 32/224 (14%)
Query: 47 FELGKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE-NKTAYVKLERIVL 99
+EL K Y G G+Y V A +G A+K + + F ++ K AY +L ++L
Sbjct: 38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYREL--LLL 95
Query: 100 DQLDHPGVVRLFFTF------QDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
+ H V+ L F ++ + Y+ + + Q SE++ ++ +
Sbjct: 96 KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL---QKIMGMEFSEEKIQYLVYQ 152
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
++ L+YIHS G++HRD+KP NL + D +KI DFG + +D +
Sbjct: 153 MLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------------HADAEMT 199
Query: 214 TFVGTAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFK 256
+V T Y PEV+ S D+W++GC + +ML+G + FK
Sbjct: 200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 243
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 67
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 187
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 188 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 181 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 107/249 (42%), Gaps = 34/249 (13%)
Query: 42 FSIQDFELGKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLE 95
+I F+LG Y G G V A D A+K K +T + E
Sbjct: 2 MNIHGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---KIVLTDPQSVKHALRE 58
Query: 96 RIVLDQLDHPGVVRLFF--------------TFQDTFSLYMALESCEGGELFDQITSKGH 141
++ +LDH +V++F + + S+Y+ E E + +G
Sbjct: 59 IKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGP 116
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLL-TADGHIKIADFGSVKPMQDSRI 200
L E+ AR + +++ L+YIHS ++HRD+KP NL + T D +KI DFG + M
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD---- 172
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
P+ + + T Y P +L S + T D+WA GC +ML+G + F
Sbjct: 173 ---PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229
Query: 260 EWLIFQRII 268
E Q I+
Sbjct: 230 ELEQMQLIL 238
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 181 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 181 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 180 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 180 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 64
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 185 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 213
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 182 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 210
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 180 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 13/219 (5%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 67
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
S ++HRD+KP+NLL+ +G IK+ADFG +R +P + T Y
Sbjct: 128 SHRVLHRDLKPQNLLINTEGAIKLADFGL------ARAFGVPVRTYTHEVVTL----WYR 177
Query: 223 PPEV-LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
PE+ L + D+W+LGC +M++ + F SE
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 216
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 25/269 (9%)
Query: 6 KDFDSKLRIEG----------NNNSSTNCPTVQRSKSFAFRA-PQEHFSI--QDFELGKI 52
+ D+ R+EG ++ ST P ++S RA P++ + + +D LG+
Sbjct: 62 QSLDNLYRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQ 121
Query: 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G++ +V + T+ A+K ++ + + K +++ RI L Q HP +VRL
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARI-LKQYSHPNIVRLIG 179
Query: 113 TFQDTFSLYMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDI 171
+Y+ +E +GG+ + ++G L + +EY+ S IHRD+
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 172 KPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP 231
N L+T +KI+DFG + D + A+ + TA PE LN
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADG----VXAASGGLRQVPVKWTA----PEALNYGR 291
Query: 232 ATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ +D+W+ G L++ S G SP+ + S
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 13/219 (5%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
S ++HRD+KP+NLL+ +G IK+ADFG +R +P + T Y
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGL------ARAFGVPVRTYTHEVVTL----WYR 170
Query: 223 PPEV-LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
PE+ L + D+W+LGC +M++ + F SE
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 32/224 (14%)
Query: 47 FELGKIY------GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE-NKTAYVKLERIVL 99
+EL K Y G G+Y V A +G A+K + + F ++ K AY +L ++L
Sbjct: 20 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYREL--LLL 77
Query: 100 DQLDHPGVVRLFFTF------QDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE 153
+ H V+ L F ++ + Y+ + + Q SE++ ++ +
Sbjct: 78 KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL---QKIMGLKFSEEKIQYLVYQ 134
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
++ L+YIHS G++HRD+KP NL + D +KI DFG + +D +
Sbjct: 135 MLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------------HADAEMT 181
Query: 214 TFVGTAAYVPPEVLNSSPATFGN-DLWALGCTLYQMLSGTSPFK 256
+V T Y PEV+ S D+W++GC + +ML+G + FK
Sbjct: 182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 225
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 25/224 (11%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
++F+ + G G+Y V +A+ TG V ALK + T+ + ++ E +L +L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 60
Query: 105 PGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS 163
P +V+L LY+ E + + F ++ + + Y +++ L + HS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTFV 216
++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 181 STAV----------------DIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 129 GGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIAD 188
G +L+ + ++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI D
Sbjct: 129 GADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 187
Query: 189 FGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQ 247
FG + P+ +V T Y PE+ LNS T D+W++GC L +
Sbjct: 188 FGLAR-------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 248 MLSGTSPF 255
MLS F
Sbjct: 241 MLSNRPIF 248
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 31/243 (12%)
Query: 29 RSKSFAFRAPQEHFSIQDFEL--GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE 86
R K+ R + + I D ++ G+ G GS+ V + K G V A+K+++ T +
Sbjct: 18 RMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQ 74
Query: 87 NKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDE 146
A+ K E VL + H ++ LF + L + + CEG L+ HL E
Sbjct: 75 QLQAF-KNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIE 126
Query: 147 ARFYTAEVVD-------ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199
+F +++D ++Y+H+ +IHRD+K N+ L D +KI DFG
Sbjct: 127 TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA------- 179
Query: 200 ITVLPNAASDDKACTFVGTAAYVPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFK 256
T + + G+ ++ PEV+ + +P +F +D++A G LY++++G P+
Sbjct: 180 -TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 238
Query: 257 DTS 259
+ +
Sbjct: 239 NIN 241
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 25/269 (9%)
Query: 6 KDFDSKLRIEG----------NNNSSTNCPTVQRSKSFAFRA-PQEHFSI--QDFELGKI 52
+ D+ R+EG ++ ST P ++S RA P++ + + +D LG+
Sbjct: 62 QSLDNLYRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQ 121
Query: 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFF 112
G G++ +V + T+ A+K ++ + + K +++ RI L Q HP +VRL
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARI-LKQYSHPNIVRLIG 179
Query: 113 TFQDTFSLYMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDI 171
+Y+ +E +GG+ + ++G L + +EY+ S IHRD+
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 172 KPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP 231
N L+T +KI+DFG + D AAS V + PE LN
Sbjct: 240 AARNCLVTEKNVLKISDFGMSREEADGVY-----AASGGLRQVPV---KWTAPEALNYGR 291
Query: 232 ATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ +D+W+ G L++ S G SP+ + S
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLS 320
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 31/243 (12%)
Query: 29 RSKSFAFRAPQEHFSIQDFEL--GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE 86
R K+ R + + I D ++ G+ G GS+ V + K G V A+K+++ T +
Sbjct: 10 RMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQ 66
Query: 87 NKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDE 146
A+ K E VL + H ++ LF + L + + CEG L+ HL E
Sbjct: 67 QLQAF-KNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIE 118
Query: 147 ARFYTAEVVD-------ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199
+F +++D ++Y+H+ +IHRD+K N+ L D +KI DFG
Sbjct: 119 TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA------- 171
Query: 200 ITVLPNAASDDKACTFVGTAAYVPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFK 256
T + + G+ ++ PEV+ + +P +F +D++A G LY++++G P+
Sbjct: 172 -TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 230
Query: 257 DTS 259
+ +
Sbjct: 231 NIN 233
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 14/215 (6%)
Query: 40 EHFSIQDFELGKIY--GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
++F ++ +L I G G+Y V + + + +G + A+K + ++E K + L+ I
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLD-I 102
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG--ELFDQITSKGH-LSEDEARFYTAEV 154
+ +D P V + +++ +E + + + Q+ KG + ED +
Sbjct: 103 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 155 VDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
V ALE++HS + +IHRD+KP N+L+ A G +K+ DFG + DS A + D C
Sbjct: 163 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV------AKTIDAGC 216
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQM 248
+ PE LN + +D+W+LG T+ ++
Sbjct: 217 KPYMAPERINPE-LNQKGYSVKSDIWSLGITMIEL 250
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK--TAYVKLERIVLDQLDHPGVVRLF 111
G G+Y V +A+ + G +ALK K + KE++ + E +L +L H +V+L+
Sbjct: 11 GEGTYGVVYKAQN-NYGETFALK---KIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 112 FTFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHR 169
L + E + +L D +G L A+ + ++++ + Y H ++HR
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 170 DIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL-N 228
D+KP+NLL+ +G +KIADFG + K V T Y P+VL
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAF----------GIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 229 SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
S + D+W++GC +M++GT F SE RI R + PN
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF-RILGTPN 221
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVY-ALKIMDKKFITKENKTAYVKLERIV----L 99
Q +E G G+Y KV +A+ + G + ALK + + T E + + L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHL 68
Query: 100 DQLDHPGVVRLF------FTFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYT 151
+ +HP VVRLF T ++T L + E + D++ G + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRET-KLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMM 126
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDK 211
+++ L+++HS ++HRD+KP+N+L+T+ G IK+ADFG +RI A +
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL------ARIYSFQMALT--- 177
Query: 212 ACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ V T Y PEVL S DLW++GC +M F+ +S+
Sbjct: 178 --SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVY-ALKIMDKKFITKENKTAYVKLERIV----L 99
Q +E G G+Y KV +A+ + G + ALK + + T E + + L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHL 68
Query: 100 DQLDHPGVVRLF------FTFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYT 151
+ +HP VVRLF T ++T L + E + D++ G + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRET-KLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMM 126
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDK 211
+++ L+++HS ++HRD+KP+N+L+T+ G IK+ADFG +RI A +
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL------ARIYSFQMALT--- 177
Query: 212 ACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ V T Y PEVL S DLW++GC +M F+ +S+
Sbjct: 178 --SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVY-ALKIMDKKFITKENKTAYVKLERIV----L 99
Q +E G G+Y KV +A+ + G + ALK + + T E + + L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRV--RVQTGEEGMPLSTIREVAVLRHL 68
Query: 100 DQLDHPGVVRLF------FTFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYT 151
+ +HP VVRLF T ++T L + E + D++ G + + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRET-KLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMM 126
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDK 211
+++ L+++HS ++HRD+KP+N+L+T+ G IK+ADFG +RI A +
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL------ARIYSFQMALT--- 177
Query: 212 ACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ V T Y PEVL S DLW++GC +M F+ +S+
Sbjct: 178 --SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD 224
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
+G+ G GS+ V + K G V A+K+++ T + A+ K E VL + H ++
Sbjct: 12 VGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 67
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD-------ALEYI 161
LF + L + + CEG L+ HL E +F +++D ++Y+
Sbjct: 68 -LFMGYSTAPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H+ +IHRD+K N+ L D +KI DFG TV + + G+ +
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRWSGSHQFEQLSGSILW 172
Query: 222 VPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ PEV+ + +P +F +D++A G LY++++G P+ + +
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
+G+ G GS+ V + K G V A+K+++ T + A+ K E VL + H ++
Sbjct: 14 VGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 69
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD-------ALEYI 161
LF + L + + CEG L+ HL E +F +++D ++Y+
Sbjct: 70 -LFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQGMDYL 122
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H+ +IHRD+K N+ L D +KI DFG TV + + G+ +
Sbjct: 123 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRWSGSHQFEQLSGSILW 174
Query: 222 VPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ PEV+ + +P +F +D++A G LY++++G P+ + +
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK--TAYVKLERIVLDQLDHPGVVRLF 111
G G+Y V +A+ + G +ALK K + KE++ + E +L +L H +V+L+
Sbjct: 11 GEGTYGVVYKAQN-NYGETFALK---KIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 112 FTFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHR 169
L + E + +L D +G L A+ + ++++ + Y H ++HR
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 170 DIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL-N 228
D+KP+NLL+ +G +KIADFG + K + T Y P+VL
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAF----------GIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 229 SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
S + D+W++GC +M++GT F SE RI R + PN
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF-RILGTPN 221
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
+G+ G GS+ V + K G V A+K+++ T + A+ K E VL + H ++
Sbjct: 17 VGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 72
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD-------ALEYI 161
LF + L + + CEG L+ HL E +F +++D ++Y+
Sbjct: 73 -LFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQGMDYL 125
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H+ +IHRD+K N+ L D +KI DFG TV + + G+ +
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRWSGSHQFEQLSGSILW 177
Query: 222 VPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ PEV+ + +P +F +D++A G LY++++G P+ + +
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
+G+ G GS+ V + K G V A+K+++ T + A+ K E VL + H ++
Sbjct: 12 VGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 67
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD-------ALEYI 161
LF + L + + CEG L+ HL E +F +++D ++Y+
Sbjct: 68 -LFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H+ +IHRD+K N+ L D +KI DFG TV + + G+ +
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRWSGSHQFEQLSGSILW 172
Query: 222 VPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ PEV+ + +P +F +D++A G LY++++G P+ + +
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 27/232 (11%)
Query: 37 APQEH--FSIQDF-ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVK 93
+P++H F+ +D +LG+I G G+Y V + +G + A+K + KE K +
Sbjct: 12 SPEQHWDFTAEDLKDLGEI-GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMD 70
Query: 94 LERIVLDQLDHPGVVRLF---FTFQDTFSLYMALESCEGGELFDQITS--KGHLSEDEAR 148
L+ +V+ D P +V+ + F D + + M L S + + + S + E+
Sbjct: 71 LD-VVMRSSDCPYIVQFYGALFREGDCW-ICMELMSTSFDKFYKYVYSVLDDVIPEEILG 128
Query: 149 FYTAEVVDALEYI-HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207
T V AL ++ ++ +IHRDIKP N+LL G+IK+ DFG + DS A
Sbjct: 129 KITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS------IAK 182
Query: 208 SDDKACTFVGTAAYVPPEVLNSSPATFG----NDLWALGCTLYQMLSGTSPF 255
+ D C Y+ PE ++ S + G +D+W+LG TLY++ +G P+
Sbjct: 183 TRDAGCR-----PYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 29/212 (13%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS+ V + K V LK++D T E A+ + E VL + H ++ LF
Sbjct: 45 GSGSFGTVYKGKWHGDVAVKILKVVDP---TPEQFQAF-RNEVAVLRKTRHVNIL-LFMG 99
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD-------ALEYIHSMGL 166
+ +L + + CEG L+ HL E +F +++D ++Y+H+ +
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYK------HLHVQETKFQMFQLIDIARQTAQGMDYLHAKNI 153
Query: 167 IHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV 226
IHRD+K N+ L +KI DFG TV + + G+ ++ PEV
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLA--------TVKSRWSGSQQVEQPTGSVLWMAPEV 205
Query: 227 L---NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ +++P +F +D+++ G LY++++G P+
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
+G+ G GS+ V + K G V A+K+++ T + A+ K E VL + H ++
Sbjct: 17 VGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 72
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD-------ALEYI 161
LF + L + + CEG L+ HL E +F +++D ++Y+
Sbjct: 73 -LFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQGMDYL 125
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H+ +IHRD+K N+ L D +KI DFG TV + + G+ +
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--------TVKSRWSGSHQFEQLSGSILW 177
Query: 222 VPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ PEV+ + +P +F +D++A G LY++++G P+ + +
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+Q +E + G G+Y V +AK +T + ALK + + E + E +L +L
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELK 59
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
H +VRL L + E C+ + FD + G L + + + +++ L +
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD--SCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
HS ++HRD+KP+NLL+ +G +K+A+FG + I V +A V T Y
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFG---IPVRCYSAE-------VVTLWY 167
Query: 222 VPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
PP+VL + + D+W+ GC ++ + P
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 116 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLAR- 174
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 175 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 254 PF 255
F
Sbjct: 229 IF 230
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V AL + T+ + ++ E +L +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 181 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 209
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+++F+ + G G+Y V +A+ TG V AL + T+ + ++ E +L +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 104 HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
HP +V+L LY+ E + + F ++ + + Y +++ L + H
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFG-------SVKPMQDSRITVLPNAASDDKACTF 215
S ++HRD+KP+NLL+ +G IK+ADFG V+ +T+ A C +
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
TA D+W+LGC +M++ + F SE
Sbjct: 180 YSTAV----------------DIWSLGCIFAEMVTRRALFPGDSE 208
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE----NKTAYVKLERIVLDQLDHPGVVR 109
G G ++ V +A+ +T + A+K + ++ N+TA +++ +L +L HP ++
Sbjct: 19 GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK--LLQELSHPNIIG 76
Query: 110 LFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHR 169
L F ++ + + E + L+ + Y + LEY+H ++HR
Sbjct: 77 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 136
Query: 170 DIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL-N 228
D+KP NLLL +G +K+ADFG K PN A + V T Y PE+L
Sbjct: 137 DLKPNNLLLDENGVLKLADFGLAKSFGS------PNRAYXHQ----VVTRWYRAPELLFG 186
Query: 229 SSPATFGNDLWALGCTLYQML 249
+ G D+WA+GC L ++L
Sbjct: 187 ARMYGVGVDMWAVGCILAELL 207
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 114 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR- 172
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 173 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 254 PF 255
F
Sbjct: 227 IF 228
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 118 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR- 176
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 177 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 254 PF 255
F
Sbjct: 231 IF 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 118 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR- 176
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 177 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 254 PF 255
F
Sbjct: 231 IF 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 114 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR- 172
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 173 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 254 PF 255
F
Sbjct: 227 IF 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 118 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 176
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 177 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 254 PF 255
F
Sbjct: 231 IF 232
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 114 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 172
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 173 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 254 PF 255
F
Sbjct: 227 IF 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 119 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 177
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 178 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 254 PF 255
F
Sbjct: 232 IF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 120 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 178
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 179 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 232
Query: 254 PF 255
F
Sbjct: 233 IF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 111 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 169
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 170 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 223
Query: 254 PF 255
F
Sbjct: 224 IF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 118 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 176
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 177 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 254 PF 255
F
Sbjct: 231 IF 232
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 112 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 170
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 171 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 254 PF 255
F
Sbjct: 225 IF 226
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 112 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 170
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 171 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 224
Query: 254 PF 255
F
Sbjct: 225 IF 226
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 116 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 174
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 175 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 254 PF 255
F
Sbjct: 229 IF 230
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 141 HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200
HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 124 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR------- 176
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTSPF 255
P+ +V T Y PE+ LNS T D+W++GC L +MLS F
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 116 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 174
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 175 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 254 PF 255
F
Sbjct: 229 IF 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 114 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLAR- 172
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 173 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 254 PF 255
F
Sbjct: 227 IF 228
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 122 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 180
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 181 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 234
Query: 254 PF 255
F
Sbjct: 235 IF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 114 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 172
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 173 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 226
Query: 254 PF 255
F
Sbjct: 227 IF 228
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 134 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 192
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ +V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 193 ------VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 246
Query: 254 PF 255
F
Sbjct: 247 IF 248
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G+Y+ V + K T + ALK + + +E E +L L H +V L
Sbjct: 11 GEGTYATVYKGKSKLTDNLVALK--EIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSMGLIHRDIK 172
SL + E + +L + G++ + + + +++ L Y H ++HRD+K
Sbjct: 69 IHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLK 127
Query: 173 PENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSP 231
P+NLL+ G +K+ADFG +R +P D++ T Y PP++ L S+
Sbjct: 128 PQNLLINERGELKLADFGL------ARAKSIPTKTYDNEVVTL----WYRPPDILLGSTD 177
Query: 232 ATFGNDLWALGCTLYQMLSGTSPF 255
+ D+W +GC Y+M +G F
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 49/222 (22%)
Query: 44 IQDFEL-GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL 102
I D+++ ++ G+G KV++ T +ALK++ + + + +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 70
Query: 103 DHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVD 156
P +VR+ +++ ++ L + +E +GGELF +I +G +E EA + +
Sbjct: 71 --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 157 ALEYIHSMGLIHRDIKPENLLLTA---DGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
A++Y+HS+ + HRD+KPENLL T+ + +K+ DFG K + DK+C
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKY---------DKSC 179
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
D+W+LG +Y +L G PF
Sbjct: 180 -----------------------DMWSLGVIMYILLCGYPPF 198
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 17/205 (8%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS+ V A+ + V A+K M K + E L +L HP ++
Sbjct: 63 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC 122
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ + ++ +E C G K L E E T + L Y+HS +IHRD+K
Sbjct: 123 YLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA 182
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV---LNSS 230
N+LL+ G +K+ DFGS M A FVGT ++ PEV ++
Sbjct: 183 GNILLSEPGLVKLGDFGSASIMA--------------PANXFVGTPYWMAPEVILAMDEG 228
Query: 231 PATFGNDLWALGCTLYQMLSGTSPF 255
D+W+LG T ++ P
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 70 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYL 127
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++++ +K+ DFG + M+DS + KA +
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS---------TXXKASKGKLPIKW 178
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 22/228 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENK--TAYVKLERIVLDQLDHPGVVRLF 111
G G+Y V +A+ + G +ALK K + KE++ + E +L +L H +V+L+
Sbjct: 11 GEGTYGVVYKAQN-NYGETFALK---KIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 112 FTFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHR 169
L + E + +L D +G L A+ + ++++ + Y H ++HR
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 170 DIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL-N 228
D+KP+NLL+ +G +KIADFG + K V T Y P+VL
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAF----------GIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 229 SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276
S + D+W++GC +M++G F SE RI R + PN
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIF-RILGTPN 221
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 17/205 (8%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G GS+ V A+ + V A+K M K + E L +L HP ++
Sbjct: 24 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC 83
Query: 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173
+ + ++ +E C G K L E E T + L Y+HS +IHRD+K
Sbjct: 84 YLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA 143
Query: 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV---LNSS 230
N+LL+ G +K+ DFGS M A FVGT ++ PEV ++
Sbjct: 144 GNILLSEPGLVKLGDFGSASIMA--------------PANXFVGTPYWMAPEVILAMDEG 189
Query: 231 PATFGNDLWALGCTLYQMLSGTSPF 255
D+W+LG T ++ P
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G+Y V + + + +G + A+K + ++E K + L+ I + +D P V +
Sbjct: 16 GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLD-ISMRTVDCPFTVTFYGA 74
Query: 114 FQDTFSLYMALESCEGG--ELFDQITSKGH-LSEDEARFYTAEVVDALEYIHS-MGLIHR 169
+++ +E + + + Q+ KG + ED +V ALE++HS + +IHR
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 134
Query: 170 DIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD-DKACTFVGTAAYVPPEVLN 228
D+KP N+L+ A G +K+ DFG + D + A D D C + PE LN
Sbjct: 135 DVKPSNVLINALGQVKMCDFGISGYLVD-------DVAKDIDAGCKPYMAPERINPE-LN 186
Query: 229 SSPATFGNDLWALGCTLYQM 248
+ +D+W+LG T+ ++
Sbjct: 187 QKGYSVKSDIWSLGITMIEL 206
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 120 LYMALESCEGGELFDQITSKGHLSEDE---ARFYTAEVVDALEYIHSMGLIHRDIKPENL 176
LY+ ++ C L D + + L + E ++ +A+E++HS GL+HRD+KP N+
Sbjct: 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNI 195
Query: 177 LLTADGHIKIADFGSVKPM-QDSR----ITVLPNAASDDKACTFVGTAAYVPPEVLNSSP 231
T D +K+ DFG V M QD +T +P A+ VGT Y+ PE ++ +
Sbjct: 196 FFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ---VGTKLYMSPEQIHGNN 252
Query: 232 ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRII--ARDIRFPNYFS 279
+ D+++LG L+++L S + RII R+++FP F+
Sbjct: 253 YSHKVDIFSLGLILFELLYSFSTQMERV------RIITDVRNLKFPLLFT 296
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ DFE + G G + V AK YA+K + + +E V E L +L+
Sbjct: 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRI--RLPNRELAREKVMREVKALAKLE 62
Query: 104 HPGVVRLFFTFQDT 117
HPG+VR F + +T
Sbjct: 63 HPGIVRYFNAWLET 76
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI-VLDQLDHPGVVRLFF 112
G G+Y V +AK G + ALK + + ++ + I +L +L HP +V L
Sbjct: 30 GEGTYGVVYKAKD-SQGRIVALKRI--RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 113 TFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
L + E E ++ D+ +K L + + + Y +++ + + H ++HRD
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 171 IKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL-NS 229
+KP+NLL+ +DG +K+ADFG +R +P + + T Y P+VL S
Sbjct: 145 LKPQNLLINSDGALKLADFGL------ARAFGIPVRSYTHEVVTL----WYRAPDVLMGS 194
Query: 230 SPATFGNDLWALGCTLYQMLSGTSPF 255
+ D+W++GC +M++G F
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 36/223 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIM-DKKFITKENKTAYVKLERIVLDQLDHPGVVR 109
K+ G GS+ V +AK +++ V K++ DK+F +E +++ RIV HP VV
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRE-----LQIMRIV----KHPNVVD 96
Query: 110 LFFTF------QDTFSLYMALESC-----EGGELFDQITSKGHLSEDEARFYTAEVVDAL 158
L F +D L + LE + ++ K + + Y +++ +L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKL--KQTMPMLLIKLYMYQLLRSL 154
Query: 159 EYIHSMGLIHRDIKPENLLL-TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
YIHS+G+ HRDIKP+NLLL G +K+ DFGS K + I PN + +
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL----IAGEPNVSX-------IC 203
Query: 218 TAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ Y PE + ++ T D+W+ GC + +++ G F S
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI-VLDQLDHPGVVRLFF 112
G G+Y V +AK G + ALK + + ++ + I +L +L HP +V L
Sbjct: 30 GEGTYGVVYKAKD-SQGRIVALKRI--RLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 113 TFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRD 170
L + E E ++ D+ +K L + + + Y +++ + + H ++HRD
Sbjct: 87 VIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 171 IKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL-NS 229
+KP+NLL+ +DG +K+ADFG +R +P + + T Y P+VL S
Sbjct: 145 LKPQNLLINSDGALKLADFGL------ARAFGIPVRSYTHEVVTL----WYRAPDVLMGS 194
Query: 230 SPATFGNDLWALGCTLYQMLSGTSPF 255
+ D+W++GC +M++G F
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 98 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYL 155
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++++ +K+ DFG + M+DS AS K +
Sbjct: 156 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----KASKGKL-----PIKW 206
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108
+G+ G GS+ V + K G V A+K+++ T + A+ K E VL + H ++
Sbjct: 12 VGQRIGSGSFGTVYKGKW--HGDV-AVKMLNVTAPTPQQLQAF-KNEVGVLRKTRHVNIL 67
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD-------ALEYI 161
LF + L + + CEG L+ HL E +F +++D ++Y+
Sbjct: 68 -LFMGYSTKPQLAIVTQWCEGSSLYH------HLHIIETKFEMIKLIDIARQTAQGMDYL 120
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H+ +IHRD+K N+ L D +KI DFG + SR + + G+ +
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSR------WSGSHQFEQLSGSILW 172
Query: 222 VPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
+ PEV+ + +P +F +D++A G LY++++G P+ + +
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 8/217 (3%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI 97
P F D G++ G G + + ++ +TG V +K + + +E + ++K E
Sbjct: 3 PHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLK-EVK 59
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARF-YTAEVVD 156
V+ L+HP V++ L E +GG L I S R + ++
Sbjct: 60 VMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIAS 119
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV--LPNAASDD--KA 212
+ Y+HSM +IHRD+ N L+ + ++ +ADFG + M D + L + D K
Sbjct: 120 GMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML 249
T VG ++ PE++N D+++ G L +++
Sbjct: 180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 75 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYL 132
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++++ +K+ DFG + M+DS AS K +
Sbjct: 133 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----KASKGKL-----PIKW 183
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 70 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYL 127
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++++ +K+ DFG + M+DS AS K +
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----KASKGKL-----PIKW 178
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 70 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYL 127
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++++ +K+ DFG + M+DS AS K +
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----KASKGKL-----PIKW 178
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 70 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYL 127
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++A +K+ DFG + M+DS AS K +
Sbjct: 128 ESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY----KASKGKL-----PIKW 178
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 73 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYL 130
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++++ +K+ DFG + M+DS AS K +
Sbjct: 131 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----KASKGKL-----PIKW 181
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 67 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYL 124
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++++ +K+ DFG + M+DS AS K +
Sbjct: 125 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----KASKGKL-----PIKW 175
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 72 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYL 129
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++++ +K+ DFG + M+DS AS K +
Sbjct: 130 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY----KASKGKL-----PIKW 180
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 118 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 176
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 177 ------VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 230
Query: 254 PF 255
F
Sbjct: 231 IF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 135 QITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
++ HLS D ++ +++ L+YIHS ++HRD+KP NLLL +KI DFG +
Sbjct: 119 KLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR- 177
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQMLSGTS 253
P+ V T Y PE+ LNS T D+W++GC L +MLS
Sbjct: 178 ------VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 231
Query: 254 PF 255
F
Sbjct: 232 IF 233
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 31/218 (14%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH- 104
D++L + G G YS+V A I +KI+ K+NK +K E +L+ L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKNK---IKREIKILENLRGG 91
Query: 105 PGVVRLFFTFQDTFSLYMAL--ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
P ++ L +D S AL E + F Q+ L++ + RFY E++ AL+Y H
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 163 SMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQDSRITVLPNAASDDKACTFVGT 218
SMG++HRD+KP N+++ + +++ D+G + P Q+ + V +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR--------------VAS 194
Query: 219 AAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ PE+L + + D+W+LGC L M+ PF
Sbjct: 195 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 16/226 (7%)
Query: 30 SKSFAFRAPQEHFSIQDFELGKI--YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKEN 87
+++ F+ E+F ++ +L I G G+Y V + + + +G + A+K + ++E
Sbjct: 17 TENLYFQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQ 76
Query: 88 KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG--ELFDQITSKGH-LSE 144
K L+ I +D P V + +++ E + + + Q+ KG + E
Sbjct: 77 KRLLXDLD-ISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPE 135
Query: 145 DEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203
D +V ALE++HS + +IHRD+KP N+L+ A G +K DFG + D
Sbjct: 136 DILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVD------ 189
Query: 204 PNAASD-DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQM 248
+ A D D C + PE LN + +D+W+LG T ++
Sbjct: 190 -DVAKDIDAGCKPYXAPERINPE-LNQKGYSVKSDIWSLGITXIEL 233
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 36 RAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIM--DKKFITKENKTAYVK 93
+ P +H + + +E+ K+ G GS+ +VV+A ALK++ +K+F + + +
Sbjct: 89 QVPHDHVAYR-YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRIL 147
Query: 94 LERIVLDQLDHPGVVRLF--FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYT 151
D+ + V+ + FTF++ + L S EL + +G S R +
Sbjct: 148 EHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFA 206
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGH--IKIADFGSVKPMQDSRITVLPNAASD 209
++ L+ +H +IH D+KPEN+LL G IK+ DFGS +
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGS-------------SCYEH 253
Query: 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSG 251
+ T + + Y PEV+ + D+W+LGC L ++L+G
Sbjct: 254 QRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVL 99
E F Q F+ G GSY +V + + + G +YA+K F +++ KL +
Sbjct: 52 ESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRAR--KLAEVGS 109
Query: 100 DQL--DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVD 156
+ HP VRL +++ LY+ E C G L + G L E + Y + +
Sbjct: 110 HEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLL 168
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
AL ++HS GL+H D+KP N+ L G K+ DFG +L +
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFG-----------LLVELGTAGAGEVQE 217
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQM 248
G Y+ PE+L S T D+++LG T+ ++
Sbjct: 218 GDPRYMAPELLQGSYGT-AADVFSLGLTILEV 248
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 36 RAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIM--DKKFITKENKTAYVK 93
+ P +H + + +E+ K+ G GS+ +VV+A ALK++ +K+F + + +
Sbjct: 89 QVPHDHVAYR-YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRIL 147
Query: 94 LERIVLDQLDHPGVVRLF--FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYT 151
D+ + V+ + FTF++ + L S EL + +G S R +
Sbjct: 148 EHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFA 206
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGH--IKIADFGSVKPMQDSRITVLPNAASD 209
++ L+ +H +IH D+KPEN+LL G IK+ DFGS +
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGS-------------SCYEH 253
Query: 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSG 251
+ T + + Y PEV+ + D+W+LGC L ++L+G
Sbjct: 254 QRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 450 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYL 507
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++A +K+ DFG + M+DS KA +
Sbjct: 508 ESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY---------KASKGKLPIKW 558
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 15/227 (6%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
+ ELG+ G G + V + + A+ I K T ++ E + + Q D
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSKGHLSEDEARFYTAEVVDALEYI 161
HP +V+L + +++ +E C GEL F Q+ K L Y ++ AL Y+
Sbjct: 450 HPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYL 507
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
S +HRDI N+L++++ +K+ DFG + M+DS KA +
Sbjct: 508 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY---------KASKGKLPIKW 558
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRI 267
+ PE +N T +D+W G ++++L G PF+ + RI
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 72 VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGE 131
+ ALK+ + + + E +L P VV + + LY+ G +
Sbjct: 61 IVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVD 120
Query: 132 LFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGS 191
L + +G L+ A ++ AL+ H+ G HRD+KPEN+L++AD + DFG
Sbjct: 121 LAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGI 180
Query: 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSG 251
D ++T L N VGT Y PE + S AT+ D++AL C LY+ L+G
Sbjct: 181 ASATTDEKLTQLGNT---------VGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
Query: 252 TSPFK 256
+ P++
Sbjct: 232 SPPYQ 236
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 34/231 (14%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALK-IMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLF- 111
G G +S V + + G YALK I+ + +E + R+ +HP ++RL
Sbjct: 38 GEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRL----FNHPNILRLVA 93
Query: 112 FTFQD---TFSLYMALESCEGGELFDQIT---SKGH-LSEDEARFYTAEVVDALEYIHSM 164
+ ++ ++ L + G L+++I KG+ L+ED+ + + LE IH+
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKP----MQDSR--ITVLPNAASDDKACTFVGT 218
G HRD+KP N+LL +G + D GS+ ++ SR +T+ AA + CT
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA---QRCTI--- 207
Query: 219 AAYVPPEVLNSSPATF---GNDLWALGCTLYQMLSGTSPFKDTSEWLIFQR 266
+Y PE+ + D+W+LGC LY M+ G P+ ++FQ+
Sbjct: 208 -SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD-----MVFQK 252
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVV-------RAKKIDTGTVYALKIMDKKFITKENKT 89
+PQ + +D L +I G G + +V + +KI+ KK T +NK
Sbjct: 16 SPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC-----KKDCTLDNKE 70
Query: 90 AYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQIT-SKGHLSEDEAR 148
++ E +++ LDHP +V+L ++ + ++ +E GEL + +K L
Sbjct: 71 KFMS-EAVIMKNLDHPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLV 128
Query: 149 FYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD-----SRITVL 203
Y+ ++ A+ Y+ S+ +HRDI N+L+ + +K+ DFG + ++D + +T L
Sbjct: 129 LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 188
Query: 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
P ++ PE +N T +D+W ++++LS G PF
Sbjct: 189 P--------------IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 121/279 (43%), Gaps = 43/279 (15%)
Query: 8 FDSKLRIEGNNNSSTNCPTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRA--- 64
++S+L++ SS N + + + E F ++ E GK+ G G++ KV+ A
Sbjct: 9 YESQLQMVQVTGSSDNEYFYVDFREYEYDLKWE-FPRENLEFGKVLGSGAFGKVMNATAY 67
Query: 65 --KKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLY 121
K A+K++ +K + E + +L+ ++ QL H +V L + +Y
Sbjct: 68 GISKTGVSIQVAVKMLKEKADSSEREALMSELK--MMTQLGSHENIVNLLGACTLSGPIY 125
Query: 122 MALESCEGGELFDQITSKGH-LSEDEARF----------------------YTAEVVDAL 158
+ E C G+L + + SK SEDE + + +V +
Sbjct: 126 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGM 185
Query: 159 EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP-MQDSRITVLPNAASDDKACTFVG 217
E++ +HRD+ N+L+T +KI DFG + M DS V NA K
Sbjct: 186 EFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK------ 239
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ PE L T +D+W+ G L+++ S G +P+
Sbjct: 240 ---WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 27/223 (12%)
Query: 46 DFELGKIYGVGSYSKVVRAKKI-DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+ L +I G+G + KV RA I D V A + + I++ + V+ E + L H
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIEN--VRQEAKLFAMLKH 65
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS- 163
P ++ L +L + +E GG L +++ S + D + ++ + Y+H
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDE 124
Query: 164 --MGLIHRDIKPENLLLT--------ADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ +IHRD+K N+L+ ++ +KI DFG + R T + A
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH--RTTKMSAA------- 175
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK 256
G A++ PEV+ +S + G+D+W+ G L+++L+G PF+
Sbjct: 176 ---GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR 215
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113
G G+Y+ V + TG ALK + K ++E + E ++ +L H +VRL+
Sbjct: 14 GNGTYATVYKGLNKTTGVYVALK--EVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 114 FQDTFSLYMALESCEGG--ELFDQIT---SKGHLSEDEARFYTAEVVDALEYIHSMGLIH 168
L + E + + D T + L + +++ +++ L + H ++H
Sbjct: 72 IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILH 131
Query: 169 RDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL- 227
RD+KP+NLL+ G +K+ DFG + + N S + V T Y P+VL
Sbjct: 132 RDLKPQNLLINKRGQLKLGDFGLARA-----FGIPVNTFSSE-----VVTLWYRAPDVLM 181
Query: 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
S + D+W+ GC L +M++G F T++
Sbjct: 182 GSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 120/251 (47%), Gaps = 28/251 (11%)
Query: 30 SKSFAFRAPQEHFSI-QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKEN- 87
S+ ++ + F++ + ++ K G G+ V A G A+K + + F + +
Sbjct: 6 SQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA 65
Query: 88 KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALESCEGGELFDQITSKGH 141
K AY +L ++L ++H ++ L FT Q T +Y+ +E + + H
Sbjct: 66 KRAYREL--VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LCQVIH 118
Query: 142 LSEDEAR--FYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199
+ D R + +++ ++++HS G+IHRD+KP N+++ +D +KI DFG +
Sbjct: 119 MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------ 172
Query: 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
A+++ +V T Y PEV+ D+W++GC + +++ G+ F+ T
Sbjct: 173 -----TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 227
Query: 260 EWLIFQRIIAR 270
+ ++I +
Sbjct: 228 HIDQWNKVIEQ 238
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY--VKLERI-VLDQLDH 104
+L KI G G++ +V +A+ TG ALK K + + K + L I +L L H
Sbjct: 22 KLAKI-GQGTFGEVFKARHRKTGQKVALK----KVLMENEKEGFPITALREIKILQLLKH 76
Query: 105 PGVVRLFFTFQDTFS--------LYMALESCEG--GELFDQITSKGHLSEDEARFYTAEV 154
VV L + S +Y+ + CE L + K LSE + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 134
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++ L YIH ++HRD+K N+L+T DG +K+ADFG +R L + ++
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL------ARAFSLAKNSQPNRYXN 188
Query: 215 FVGTAAYVPPEVLNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSE 260
V T Y PPE+L +G DLW GC + +M + + + +E
Sbjct: 189 RVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 35/233 (15%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVV-------RAKKIDTGTVYALKIMDKKFITKENKT 89
PQ + +D L +I G G + +V + +KI+ KK T +NK
Sbjct: 4 GPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC-----KKDCTLDNKE 58
Query: 90 AYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQIT-SKGHLSEDEAR 148
++ E +++ LDHP +V+L ++ + ++ +E GEL + +K L
Sbjct: 59 KFMS-EAVIMKNLDHPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLV 116
Query: 149 FYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD-----SRITVL 203
Y+ ++ A+ Y+ S+ +HRDI N+L+ + +K+ DFG + ++D + +T L
Sbjct: 117 LYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 176
Query: 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
P ++ PE +N T +D+W ++++LS G PF
Sbjct: 177 P--------------IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY--VKLERI-VLDQLDH 104
+L KI G G++ +V +A+ TG ALK K + + K + L I +L L H
Sbjct: 21 KLAKI-GQGTFGEVFKARHRKTGQKVALK----KVLMENEKEGFPITALREIKILQLLKH 75
Query: 105 PGVVRLFFTFQDTFS--------LYMALESCEG--GELFDQITSKGHLSEDEARFYTAEV 154
VV L + S +Y+ + CE L + K LSE + +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 133
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++ L YIH ++HRD+K N+L+T DG +K+ADFG +R L + ++
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL------ARAFSLAKNSQPNRYXN 187
Query: 215 FVGTAAYVPPEVLNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSE 260
V T Y PPE+L +G DLW GC + +M + + + +E
Sbjct: 188 RVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY--VKLERI-VLDQLDH 104
+L KI G G++ +V +A+ TG ALK K + + K + L I +L L H
Sbjct: 22 KLAKI-GQGTFGEVFKARHRKTGQKVALK----KVLMENEKEGFPITALREIKILQLLKH 76
Query: 105 PGVVRLFFTFQDTFS--------LYMALESCEG--GELFDQITSKGHLSEDEARFYTAEV 154
VV L + S +Y+ + CE L + K LSE + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 134
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++ L YIH ++HRD+K N+L+T DG +K+ADFG +R L + ++
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL------ARAFSLAKNSQPNRYXN 188
Query: 215 FVGTAAYVPPEVLNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSE 260
V T Y PPE+L +G DLW GC + +M + + + +E
Sbjct: 189 RVVTLWYRPPELL-LGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 35/232 (15%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVV-------RAKKIDTGTVYALKIMDKKFITKENKTA 90
PQ + +D L +I G G + +V + +KI+ KK T +NK
Sbjct: 1 PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC-----KKDCTLDNKEK 55
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQIT-SKGHLSEDEARF 149
++ E +++ LDHP +V+L ++ + ++ +E GEL + +K L
Sbjct: 56 FMS-EAVIMKNLDHPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVL 113
Query: 150 YTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD-----SRITVLP 204
Y+ ++ A+ Y+ S+ +HRDI N+L+ + +K+ DFG + ++D + +T LP
Sbjct: 114 YSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 173
Query: 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ PE +N T +D+W ++++LS G PF
Sbjct: 174 --------------IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 29/228 (12%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY--VKLERI-VLDQLDH 104
+L KI G G++ +V +A+ TG ALK K + + K + L I +L L H
Sbjct: 22 KLAKI-GQGTFGEVFKARHRKTGQKVALK----KVLMENEKEGFPITALREIKILQLLKH 76
Query: 105 PGVVRLFFTFQDTFS--------LYMALESCEG--GELFDQITSKGHLSEDEARFYTAEV 154
VV L + S +Y+ + CE L + K LSE + +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML 134
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++ L YIH ++HRD+K N+L+T DG +K+ADFG +R L + ++
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL------ARAFSLAKNSQPNRYXN 188
Query: 215 FVGTAAYVPPEVLNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTSE 260
V T Y PPE+L +G DLW GC + +M + + + +E
Sbjct: 189 RVVTLWYRPPELL-LGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKEN-KTAYVKLERIVLDQL 102
++ ++ K G G+ V A G A+K + + F + + K AY +L ++L +
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYREL--VLLKCV 80
Query: 103 DHPGVVRLF--FTFQDTFS----LYMALESCEGGELFDQITSKGHLSEDEAR--FYTAEV 154
+H ++ L FT Q T +Y+ +E + + H+ D R + ++
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LCQVIHMELDHERMSYLLYQM 135
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
+ ++++HS G+IHRD+KP N+++ +D +KI DFG + A ++
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------TACTNFMMTP 184
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270
+V T Y PEV+ D+W++GC + +++ G F+ T + ++I +
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQ 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 50/263 (19%)
Query: 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL- 102
I D+ + + G ++K++ +K YALK +K + K+ ++I +
Sbjct: 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87
Query: 103 -DHPGVVRLFFTFQDTFSLYMALESCEG--------GELFDQITSKGHLSEDEARF---- 149
D +++ ++ + L +CEG +++ + + L DE F
Sbjct: 88 DDFKNELQIITDIKNEYCL-----TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK 142
Query: 150 -YTA------------EVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195
YT V+++ YIH+ + HRD+KP N+L+ +G +K++DFG + M
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
Query: 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGN--DLWALGCTLYQMLSGTS 253
D +I GT ++PPE ++ + G D+W+LG LY M
Sbjct: 203 VDKKIK------------GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250
Query: 254 PFK-DTSEWLIFQRIIARDIRFP 275
PF S +F I ++I +P
Sbjct: 251 PFSLKISLVELFNNIRTKNIEYP 273
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 52 IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLF 111
+ G G+ +V D V +I+ + F + + ++ + +HP V+R F
Sbjct: 31 VLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLR------ESDEHPNVIRYF 84
Query: 112 FTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHR 169
T +D Y+A+E C L + + K HL + + L ++HS+ ++HR
Sbjct: 85 CTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQ-QTTSGLAHLHSLNIVHR 142
Query: 170 DIKPENLLLT---ADGHIK--IADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
D+KP N+L++ A G IK I+DFG K + R S + GT ++ P
Sbjct: 143 DLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR-------HSFSRRSGVPGTEGWIAP 195
Query: 225 EVLNSSPA---TFGNDLWALGCTLYQMLS-GTSPF 255
E+L+ T+ D+++ GC Y ++S G+ PF
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 36 RAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIM--DKKFITKENKTAYVK 93
+ P +H + + +E+ K+ G G + +VV+A ALK++ +K+F + + +
Sbjct: 89 QVPHDHVAYR-YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRIL 147
Query: 94 LERIVLDQLDHPGVVRLF--FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYT 151
D+ + V+ + FTF++ + L S EL + +G S R +
Sbjct: 148 EHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKFA 206
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGH--IKIADFGSVKPMQDSRITVLPNAASD 209
++ L+ +H +IH D+KPEN+LL G IK+ DFGS +
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGS-------------SCYEH 253
Query: 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSG 251
+ + + Y PEV+ + D+W+LGC L ++L+G
Sbjct: 254 QRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 131 ELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFG 190
+L+ + S+ LS D ++ +++ L+YIHS ++HRD+KP NLL+ +KI DFG
Sbjct: 131 DLYKLLKSQ-QLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFG 189
Query: 191 SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV-LNSSPATFGNDLWALGCTLYQML 249
+ P V T Y PE+ LNS T D+W++GC L +ML
Sbjct: 190 LAR-------IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 250 SGTSPF 255
S F
Sbjct: 243 SNRPIF 248
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV-----LDQLDHPGVV 108
GVG+Y V +A+ +G ALK + + R V L+ +HP VV
Sbjct: 18 GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVV 77
Query: 109 RLFFTFQDT-----FSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYI 161
RL + + + E + D+ G L + + + + L+++
Sbjct: 78 RLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFL 136
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H+ ++HRD+KPEN+L+T+ G +K+ADFG + + ++ + P V T Y
Sbjct: 137 HANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALTP----------VVVTLWY 185
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
PEVL S D+W++GC +M F SE
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 224
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV----LDQLDHPGVVR 109
GVG+Y V +A+ +G ALK + + E + + L+ +HP VVR
Sbjct: 13 GVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 110 LFFTFQDT-----FSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
L + + + E + D+ G L + + + + L+++H
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFLH 129
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
+ ++HRD+KPEN+L+T+ G +K+ADFG + + ++ + P V T Y
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALFP----------VVVTLWYR 178
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
PEVL S D+W++GC +M F SE
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 17 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL------DSFLRKHDAQFTVIQLV 121
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 122 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 176
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 177 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 226
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 46 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHDAQFTVIQLV 150
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 151 GMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 205
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 46 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHDAQFTVIQLV 150
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDD-----PEAAY 205
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 19/240 (7%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGT----VYALKIMDKKFITKENKTAYVKLERIVLD 100
+D L + G GS+ VVR + D + A+K + +++ E +
Sbjct: 18 KDLRLLEKLGDGSFG-VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 76
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALE 159
LDH ++RL+ T + M E G L D++ +GH Y +V + +
Sbjct: 77 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK--PMQDSRITVLPNAASDDKACTFVG 217
Y+ S IHRD+ NLLL +KI DFG ++ P D + + + F
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM-----QEHRKVPF-- 188
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRFPN 276
A+ PE L + + +D W G TL++M + G P+ + I +I R P
Sbjct: 189 --AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 46 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL------DSFLRKHDAQFTVIQLV 150
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 205
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 39/232 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
KI G GS VV G+ + K+ + A +++ +++ + DHP V+R
Sbjct: 39 KILGYGSSGTVVFQ-----GSFQGRPVAVKRMLIDFCDIALMEI-KLLTESDDHPNVIRY 92
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTA--------EVVDALEYIH 162
+ + LY+ALE C L D + SK ++S++ + ++ + ++H
Sbjct: 93 YCSETTDRFLYIALELCNLN-LQDLVESK-NVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 163 SMGLIHRDIKPENLLL------TADGH-------IKIADFGSVKPMQDSRITVLPNAASD 209
S+ +IHRD+KP+N+L+ TAD I I+DFG K + + N +
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 210 DKACTFVGTAAYVPPEVLNSSPA---TFGNDLWALGCTLYQMLS-GTSPFKD 257
GT+ + PE+L S T D++++GC Y +LS G PF D
Sbjct: 211 S------GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 46 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL------DSFLRKHDAQFTVIQLV 150
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 151 GMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 205
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 34 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHDAQFTVIQLV 138
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 139 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 193
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 194 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 243
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 19/240 (7%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGT----VYALKIMDKKFITKENKTAYVKLERIVLD 100
+D L + G GS+ VVR + D + A+K + +++ E +
Sbjct: 18 KDLRLLEKLGDGSFG-VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 76
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALE 159
LDH ++RL+ T + M E G L D++ +GH Y +V + +
Sbjct: 77 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK--PMQDSRITVLPNAASDDKACTFVG 217
Y+ S IHRD+ NLLL +KI DFG ++ P D + + + F
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-----QEHRKVPF-- 188
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRFPN 276
A+ PE L + + +D W G TL++M + G P+ + I +I R P
Sbjct: 189 --AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV----LDQLDHPGVVR 109
GVG+Y V +A+ +G ALK + + E + + L+ +HP VVR
Sbjct: 13 GVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 110 LFFTFQDT-----FSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
L + + + E + D+ G L + + + + L+++H
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFLH 129
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
+ ++HRD+KPEN+L+T+ G +K+ADFG + + ++ + P V T Y
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALAP----------VVVTLWYR 178
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
PEVL S D+W++GC +M F SE
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 39/232 (16%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
KI G GS VV G+ + K+ + A +++ +++ + DHP V+R
Sbjct: 39 KILGYGSSGTVVFQ-----GSFQGRPVAVKRMLIDFCDIALMEI-KLLTESDDHPNVIRY 92
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTA--------EVVDALEYIH 162
+ + LY+ALE C L D + SK ++S++ + ++ + ++H
Sbjct: 93 YCSETTDRFLYIALELCNLN-LQDLVESK-NVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 163 SMGLIHRDIKPENLLL------TADGH-------IKIADFGSVKPMQDSRITVLPNAASD 209
S+ +IHRD+KP+N+L+ TAD I I+DFG K + + N +
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 210 DKACTFVGTAAYVPPEVLNSSPA---TFGNDLWALGCTLYQMLS-GTSPFKD 257
GT+ + PE+L S T D++++GC Y +LS G PF D
Sbjct: 211 S------GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 41/230 (17%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLDQLDH 104
F++ ++ G G++ V K+ TG A+K I D +F +E + L L H
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD------LAVLHH 78
Query: 105 PGVVRL---FFTF--QDTFSLYM---------ALESCEGGELFDQITSKGHLSEDEARFY 150
P +V+L F+T +D +Y+ L C Q+ L + +
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL----IKVF 134
Query: 151 TAEVVDALEYIH--SMGLIHRDIKPENLLLT-ADGHIKIADFGSVKPMQDSRITVLPNAA 207
+++ ++ +H S+ + HRDIKP N+L+ ADG +K+ DFGS K + S PN A
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE----PNVA 190
Query: 208 SDDKACTFVGTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLSGTSPFK 256
++ + Y PE + + T D+W++GC +M+ G F+
Sbjct: 191 -------YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + + G GS+ V RA+ G+ A+KI+ ++ E +++ E ++ +L HP
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLR-EVAIMKRLRHP 94
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSE-DEARFYTA--EVVDALEYIH 162
+V +L + E G L+ + G + DE R + +V + Y+H
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 163 SMG--LIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV---- 216
+ ++HR++K NLL+ +K+ DFG SR+ KA TF+
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL------SRL----------KASTFLSSKS 198
Query: 217 --GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
GT ++ PEVL P+ +D+++ G L+++ + P+
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + + G GS+ V RA+ G+ A+KI+ ++ E +++ E ++ +L HP
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLR-EVAIMKRLRHP 94
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSE-DEARFYTA--EVVDALEYIH 162
+V +L + E G L+ + G + DE R + +V + Y+H
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 163 SMG--LIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA 220
+ ++HRD+K NLL+ +K+ DFG SR+ S A GT
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGL------SRLKASXFLXSKXAA----GTPE 204
Query: 221 YVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255
++ PEVL P+ +D+++ G L+++ + P+
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 40/224 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV--LDQLD 103
DF+ ++ G G + +V +AK +I K ++ K K K ER V L +LD
Sbjct: 12 DFKEIELIGSGGFGQVFKAKH---------RIDGKTYVIKRVKYNNEKAEREVKALAKLD 62
Query: 104 HPGVVRLFFTFQ----------------DTFSLYMALESCEGGELFDQITSKGHLSEDE- 146
H +V + T L++ +E C+ G L I + D+
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 147 -ARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
A ++ ++YIHS LI+RD+KP N+ L +KI DFG V +++
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN-------- 174
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML 249
D K GT Y+ PE ++S DL+ALG L ++L
Sbjct: 175 ---DGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 19/240 (7%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGT----VYALKIMDKKFITKENKTAYVKLERIVLD 100
+D L + G GS+ VVR + D + A+K + +++ E +
Sbjct: 8 KDLRLLEKLGDGSFG-VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALE 159
LDH ++RL+ T + M E G L D++ +GH Y +V + +
Sbjct: 67 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK--PMQDSRITVLPNAASDDKACTFVG 217
Y+ S IHRD+ NLLL +KI DFG ++ P D + + + F
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM-----QEHRKVPF-- 178
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRFPN 276
A+ PE L + + +D W G TL++M + G P+ + I +I R P
Sbjct: 179 --AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 17 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHDAQFTVIQLV 121
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 122 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 176
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 177 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 226
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 19/240 (7%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGT----VYALKIMDKKFITKENKTAYVKLERIVLD 100
+D L + G GS+ VVR + D + A+K + +++ E +
Sbjct: 12 KDLRLLEKLGDGSFG-VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 70
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALE 159
LDH ++RL+ T + M E G L D++ +GH Y +V + +
Sbjct: 71 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK--PMQDSRITVLPNAASDDKACTFVG 217
Y+ S IHRD+ NLLL +KI DFG ++ P D + + + F
Sbjct: 130 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-----QEHRKVPF-- 182
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRFPN 276
A+ PE L + + +D W G TL++M + G P+ + I +I R P
Sbjct: 183 --AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 46 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHDAQFTVIQLV 150
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 205
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 19/240 (7%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGT----VYALKIMDKKFITKENKTAYVKLERIVLD 100
+D L + G GS+ VVR + D + A+K + +++ E +
Sbjct: 12 KDLRLLEKLGDGSFG-VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 70
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALE 159
LDH ++RL+ T + M E G L D++ +GH Y +V + +
Sbjct: 71 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK--PMQDSRITVLPNAASDDKACTFVG 217
Y+ S IHRD+ NLLL +KI DFG ++ P D + + + F
Sbjct: 130 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-----QEHRKVPF-- 182
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRFPN 276
A+ PE L + + +D W G TL++M + G P+ + I +I R P
Sbjct: 183 --AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 19/240 (7%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGT----VYALKIMDKKFITKENKTAYVKLERIVLD 100
+D L + G GS+ VVR + D + A+K + +++ E +
Sbjct: 8 KDLRLLEKLGDGSFG-VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALE 159
LDH ++RL+ T + M E G L D++ +GH Y +V + +
Sbjct: 67 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK--PMQDSRITVLPNAASDDKACTFVG 217
Y+ S IHRD+ NLLL +KI DFG ++ P D + + + F
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-----QEHRKVPF-- 178
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRFPN 276
A+ PE L + + +D W G TL++M + G P+ + I +I R P
Sbjct: 179 --AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 46 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHDAQFTVIQLV 150
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 205
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 46 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHDAQFTVIQLV 150
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 205
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 19/240 (7%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGT----VYALKIMDKKFITKENKTAYVKLERIVLD 100
+D L + G GS+ VVR + D + A+K + +++ E +
Sbjct: 8 KDLRLLEKLGDGSFG-VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALE 159
LDH ++RL+ T + M E G L D++ +GH Y +V + +
Sbjct: 67 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK--PMQDSRITVLPNAASDDKACTFVG 217
Y+ S IHRD+ NLLL +KI DFG ++ P D + + + F
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-----QEHRKVPF-- 178
Query: 218 TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRFPN 276
A+ PE L + + +D W G TL++M + G P+ + I +I R P
Sbjct: 179 --AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 46 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHDAQFTVIQLV 150
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 205
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 44 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHDAQFTVIQLV 148
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 149 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAAY 203
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 204 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 253
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 40/232 (17%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLER------ 96
+ + K+ G G + +V + LK+ KK I+ K K Y + +R
Sbjct: 46 NISIDKVVGAGEFGEVCSGR---------LKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 97 -IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
++ Q DHP ++RL + + + E E G L L + +A+F ++V
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHDAQFTVIQLV 150
Query: 156 -------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
++Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD-----PEAAY 205
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G L++++S G P+ + S
Sbjct: 206 TTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV----LDQLDHPGVVR 109
GVG+Y V +A+ +G ALK + + E + + L+ +HP VVR
Sbjct: 13 GVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 110 LFFTFQDT-----FSLYMALESCEGG--ELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162
L + + + E + D+ G L + + + + L+++H
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFLH 129
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
+ ++HRD+KPEN+L+T+ G +K+ADFG + + ++ + P V T Y
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALDP----------VVVTLWYR 178
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
PEVL S D+W++GC +M F SE
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE 216
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 49/239 (20%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
KI G GS VV G+ + K+ + A +++ +++ + DHP V+R
Sbjct: 21 KILGYGSSGTVVFQ-----GSFQGRPVAVKRMLIDFCDIALMEI-KLLTESDDHPNVIRY 74
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTA--------EVVDALEYIH 162
+ + LY+ALE C L D + SK ++S++ + ++ + ++H
Sbjct: 75 YCSETTDRFLYIALELCNLN-LQDLVESK-NVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 163 SMGLIHRDIKPENLLL------TADGH-------IKIADFGSVKPM---QDSRITVLPNA 206
S+ +IHRD+KP+N+L+ TAD I I+DFG K + Q S T L N
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 207 ASDDKACTFVGTAAYVPPEVLNSSP-------ATFGNDLWALGCTLYQMLS-GTSPFKD 257
+ GT+ + PE+L S T D++++GC Y +LS G PF D
Sbjct: 193 S---------GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 31/235 (13%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYA-LKI---MDKKFITKENKTAYVKLERI 97
F + + GK G G++ KVV A G A LK+ M K + K A + +I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARF-------- 149
+ H +V L + + E C G+L + + K + E + F
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 150 ------YTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKP-MQDSRIT 201
++++V + ++ S IHRD+ N+LLT +GH+ KI DFG + M DS
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYI 221
Query: 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
V NA K ++ PE + T +D+W+ G L+++ S G +P+
Sbjct: 222 VKGNARLPVK---------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 31/235 (13%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYA-LKI---MDKKFITKENKTAYVKLERI 97
F + + GK G G++ KVV A G A LK+ M K + K A + +I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARF-------- 149
+ H +V L + + E C G+L + + K + E + F
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 150 ------YTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKP-MQDSRIT 201
++++V + ++ S IHRD+ N+LLT +GH+ KI DFG + M DS
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYI 221
Query: 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
V NA K ++ PE + T +D+W+ G L+++ S G +P+
Sbjct: 222 VKGNARLPVK---------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LSQVI-QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QMLSGTSPFKDTSEWLIFQRIIAR 270
+M+ G F T + ++I +
Sbjct: 217 EMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LSQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QMLSGTSPFKDTSEWLIFQRIIAR 270
+M+ G F T + ++I +
Sbjct: 217 EMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYA-LKI---MDKKFITKENKTAYVKLERI 97
F + + GK G G++ KVV A G A LK+ M K + K A + +I
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH--LSEDEAR------- 148
+ H +V L + + E C G+L + + K L +++ R
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 149 -FYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKP-MQDSRITVLPN 205
++++V + ++ S IHRD+ N+LLT +GH+ KI DFG + M DS V N
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGN 213
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
A K ++ PE + T +D+W+ G L+++ S G +P+
Sbjct: 214 ARLPVK---------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LSQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QMLSGTSPFKDTSEWLIFQRIIAR 270
+M+ G F T + ++I +
Sbjct: 217 EMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 27/231 (11%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYA-LKI---MDKKFITKENKTAYVKLERI 97
F + + GK G G++ KVV A G A LK+ M K + K A + +I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH--LSEDEAR------- 148
+ H +V L + + E C G+L + + K L +++ R
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 149 -FYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKP-MQDSRITVLPN 205
++++V + ++ S IHRD+ N+LLT +GH+ KI DFG + M DS V N
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
A K ++ PE + T +D+W+ G L+++ S G +P+
Sbjct: 222 ARLPVK---------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 55 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 112
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 113 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 169
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + S + V FV T Y PEV+ D+W++GC +
Sbjct: 170 LDFGLARTAGTSFMMV-----------PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 218
Query: 247 QMLSGTSPFKDTSEWLIFQRIIAR 270
+M+ G F T + ++I +
Sbjct: 219 EMIKGGVLFPGTDHIDQWNKVIEQ 242
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 30/239 (12%)
Query: 38 PQEHFSIQD-FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER 96
P + I D +E+ + G GSY V A V A+K + + F + ++ E
Sbjct: 45 PHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EI 103
Query: 97 IVLDQLDHPGVVRLF-----FTFQDTFSLYMALESCEGG--ELFDQITSKGHLSEDEARF 149
+L++L+H VV++ + LY+ LE + +LF + +L+E +
Sbjct: 104 AILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLF---RTPVYLTELHIKT 160
Query: 150 YTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFG---------------SVKP 194
++ ++Y+HS G++HRD+KP N L+ D +K+ DFG + P
Sbjct: 161 LLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISP 220
Query: 195 MQDS-RITVLPNAASDDKACT-FVGTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLS 250
+D + P+ + + T V T Y PE +L T D+W++GC ++L+
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 43/236 (18%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL 110
KI G GS VV G+ + K+ + A +++ +++ + DHP V+R
Sbjct: 21 KILGYGSSGTVVFQ-----GSFQGRPVAVKRMLIDFCDIALMEI-KLLTESDDHPNVIRY 74
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTA--------EVVDALEYIH 162
+ + LY+ALE C L D + SK ++S++ + ++ + ++H
Sbjct: 75 YCSETTDRFLYIALELCNLN-LQDLVESK-NVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 163 SMGLIHRDIKPENLLL------TADGH-------IKIADFGSVKPMQDSRITVLPNAASD 209
S+ +IHRD+KP+N+L+ TAD I I+DFG K + + N +
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 210 DKACTFVGTAAYVPPEVLNSSP-------ATFGNDLWALGCTLYQMLS-GTSPFKD 257
GT+ + PE+L S T D++++GC Y +LS G PF D
Sbjct: 193 S------GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 117 TFSLYMALESCEGGELFDQITSKGHLSEDE--ARFYTAEVVDALEYIHSMGLIHRDIKPE 174
T L++ +E C+ G L I + D+ A ++ ++YIHS LIHRD+KP
Sbjct: 106 TKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPS 165
Query: 175 NLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATF 234
N+ L +KI DFG V ++ +D K GT Y+ PE ++S
Sbjct: 166 NIFLVDTKQVKIGDFGLVTSLK-----------NDGKRTRSKGTLRYMSPEQISSQDYGK 214
Query: 235 GNDLWALGCTLYQML 249
DL+ALG L ++L
Sbjct: 215 EVDLYALGLILAELL 229
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL-ERIVLD 100
++++ +L + G G + V+ G A+K + K + TA L E V+
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCI------KNDATAQAFLAEASVMT 60
Query: 101 QLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDA 157
QL H +V+L ++ LY+ E G L D + S+G L D ++ +V +A
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 120
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT-VLPNAASDDKACTFV 216
+EY+ +HRD+ N+L++ D K++DFG K ++ T LP
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP------------ 168
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE L + + +D+W+ G L+++ S G P+
Sbjct: 169 --VKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 103/245 (42%), Gaps = 26/245 (10%)
Query: 34 AFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTG---TVYALKIMDKKFITKENKTA 90
A R + ++ K+ GVG + +V + G A+K + + K+ +
Sbjct: 3 AVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDF 62
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFY 150
E ++ Q DHP ++ L + + E E G L L +++ RF
Sbjct: 63 LS--EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL------DAFLRKNDGRFT 114
Query: 151 TAEVVDAL-------EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203
++V L +Y+ M +HRD+ N+L+ ++ K++DFG + ++D
Sbjct: 115 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD----- 169
Query: 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWL 262
P AA + + PE + T +D+W+ G +++++S G P+ D S
Sbjct: 170 PEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 227
Query: 263 IFQRI 267
+ + I
Sbjct: 228 VIKAI 232
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LSQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QMLSGTSPFKDTSEWLIFQRIIAR 270
+M+ G F T + ++I +
Sbjct: 217 EMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTG---TVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
++ K+ GVG + +V + G A+K + + K+ + E ++ Q D
Sbjct: 31 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS--EASIMGQFD 88
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV-------D 156
HP ++ L + + E E G L L +++ RF ++V
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSL------DAFLRKNDGRFTVIQLVGMLRGIGS 142
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
++Y+ M +HRD+ N+L+ ++ K++DFG + ++D P AA +
Sbjct: 143 GMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD-----PEAAYTTRGGKI- 196
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRI 267
+ PE + T +D+W+ G +++++S G P+ D S + + I
Sbjct: 197 -PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTG---TVYALKIMDKKFITKENKTAYVKLERIVLDQLD 103
++ K+ GVG + +V + G A+K + + K+ + E ++ Q D
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS--EASIMGQFD 67
Query: 104 HPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV-------D 156
HP ++ L + + E E G L L +++ RF ++V
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSL------DAFLRKNDGRFTVIQLVGMLRGIGS 121
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
++Y+ M +HRD+ N+L+ ++ K++DFG + ++D P AA +
Sbjct: 122 GMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD-----PEAAYTTRGGKI- 175
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRI 267
+ PE + T +D+W+ G +++++S G P+ D S + + I
Sbjct: 176 -PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E ++ L H +VRL+ +Y+ E G L D + S G + + ++A
Sbjct: 58 EANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 117
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + + YI IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK- 176
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G LY++++ G P+
Sbjct: 177 --------WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 85 KENKTAYVKL-ERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGH- 141
K + TA L E V+ QL H +V+L ++ LY+ E G L D + S+G
Sbjct: 53 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 112
Query: 142 -LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200
L D ++ +V +A+EY+ +HRD+ N+L++ D K++DFG K ++
Sbjct: 113 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 172
Query: 201 T-VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
T LP + PE L + +D+W+ G L+++ S G P+
Sbjct: 173 TGKLP--------------VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL-ERIVLD 100
++++ +L + G G + V+ G A+K + K + TA L E V+
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCI------KNDATAQAFLAEASVMT 54
Query: 101 QLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDA 157
QL H +V+L ++ LY+ E G L D + S+G L D ++ +V +A
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114
Query: 158 LEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT-VLPNAASDDKACTFV 216
+EY+ +HRD+ N+L++ D K++DFG K ++ T LP
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP------------ 162
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE L + +D+W+ G L+++ S G P+
Sbjct: 163 --VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LXQVI-QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QML 249
+M+
Sbjct: 217 EMV 219
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 95 ERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGH--LSEDEARFYT 151
E V+ QL H +V+L ++ LY+ E G L D + S+G L D ++
Sbjct: 236 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 295
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT-VLPNAASDD 210
+V +A+EY+ +HRD+ N+L++ D K++DFG K ++ T LP
Sbjct: 296 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP------ 349
Query: 211 KACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE L + +D+W+ G L+++ S G P+
Sbjct: 350 --------VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 23/177 (12%)
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMG 165
V+ + + F+ + +A+ E D + S LS E R Y + AL+ IH G
Sbjct: 81 NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS---LSFQEVREYMLNLFKALKRIHQFG 137
Query: 166 LIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRITVLPNAASDDKA-------CTFV- 216
++HRD+KP N L + DFG + D++I +L S+ + C+
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 217 ----------GTAAYVPPEVLNSSP-ATFGNDLWALGCTLYQMLSGTSPFKDTSEWL 262
GT + PEVL P T D+W+ G +LSG PF S+ L
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 40/233 (17%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKV------VRAKKIDTGTVYALKIMDKKFITKENKTAYV 92
+++ I D ELG G++ V +R K+ID A+K++ + T++ T +
Sbjct: 8 RDNLLIADIELG----CGNFGSVRQGVYRMRKKQIDV----AIKVLKQG--TEKADTEEM 57
Query: 93 KLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTA 152
E ++ QLD+P +VRL Q +L + +E GG L + K E+ A
Sbjct: 58 MREAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGK---REEIPVSNVA 113
Query: 153 EVVD----ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
E++ ++Y+ +HRD+ N+LL + KI+DFG K + +
Sbjct: 114 ELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL-----------GA 162
Query: 209 DDKACTFVGTA----AYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
DD T + PE +N + +D+W+ G T+++ LS G P+K
Sbjct: 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 32/235 (13%)
Query: 47 FELGKIYGVGSYSKVVRAK-KIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
++ ++ G G + +V + K+ A+ I K E + E ++ Q DHP
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALE------ 159
VV L + + +E E G L L + + +F ++V L
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGAL------DAFLRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 160 -YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT 218
Y+ MG +HRD+ N+L+ ++ K++DFG L DD + T
Sbjct: 159 RYLADMGYVHRDLAARNILVNSNLVCKVSDFG------------LSRVIEDDPEAVYTTT 206
Query: 219 AAYVP-----PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRI 267
+P PE + T +D+W+ G +++++S G P+ D S + + I
Sbjct: 207 GGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 119/256 (46%), Gaps = 32/256 (12%)
Query: 30 SKSFAFRAPQEHFSIQDF-------ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKF 82
++SF +A Q +Q++ E+G++ G G + +V + G V A++++D
Sbjct: 11 ARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRW--HGEV-AIRLID--- 64
Query: 83 ITKENKTAYVKLERIVL--DQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQIT-SK 139
I ++N+ +R V+ Q H VV L + C+G L+ + +K
Sbjct: 65 IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK 124
Query: 140 GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199
L ++ R E+V + Y+H+ G++H+D+K +N+ +G + I DFG S
Sbjct: 125 IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLF-----SI 178
Query: 200 ITVLPNAASDDKACTFVGTAAYVPPEVL---------NSSPATFGNDLWALGCTLYQMLS 250
VL +DK G ++ PE++ + P + +D++ALG Y++ +
Sbjct: 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA 238
Query: 251 GTSPFKDT-SEWLIFQ 265
PFK +E +I+Q
Sbjct: 239 REWPFKTQPAEAIIWQ 254
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 54 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 111
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 112 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 168
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 169 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 247 QMLSGTSPFKDTSEWLIFQRIIAR 270
+M+ G F T + ++I +
Sbjct: 218 EMIKGGVLFPGTDHIDQWNKVIEQ 241
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QMLSGTSPFKDTSEWLIFQRIIAR 270
+M+ G F T + ++I +
Sbjct: 217 EMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QMLSGTSPFKDTSEWLIFQRIIAR 270
+M+ G F T + ++I +
Sbjct: 217 EMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 29/173 (16%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE- 153
E V+ L H +V+L+ +++ E G L + +L E RF T +
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQL 122
Query: 154 ------VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207
V +A+EY+ S +HRD+ N L+ G +K++DFG L
Sbjct: 123 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG------------LSRYV 170
Query: 208 SDDKACTFVGT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
DD+ + VG+ + PPEVL S + +D+WA G ++++ S G P++
Sbjct: 171 LDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 46 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 104 MDAN--LXQVI-QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 160
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 161 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209
Query: 247 QML 249
+M+
Sbjct: 210 EMV 212
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 33/237 (13%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYA-LKI---MDKKFITKENKTAYVKLERI 97
F + + GK G G++ KVV A G A LK+ M K + K A + +I
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------------GH 141
+ H +V L + + E C G+L + + K
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVKP-MQDSR 199
LS + ++++V + ++ S IHRD+ N+LLT +GH+ KI DFG + M DS
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSN 221
Query: 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
V NA K ++ PE + T +D+W+ G L+++ S G +P+
Sbjct: 222 YIVKGNARLPVK---------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LXQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QML 249
+M+
Sbjct: 217 EMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LXQVI-QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QML 249
+M+
Sbjct: 217 EMV 219
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 29/173 (16%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE- 153
E V+ L H +V+L+ +++ E G L + +L E RF T +
Sbjct: 53 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQL 106
Query: 154 ------VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207
V +A+EY+ S +HRD+ N L+ G +K++DFG L
Sbjct: 107 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG------------LSRYV 154
Query: 208 SDDKACTFVGT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
DD+ + VG+ + PPEVL S + +D+WA G ++++ S G P++
Sbjct: 155 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 29/173 (16%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE- 153
E V+ L H +V+L+ +++ E G L + +L E RF T +
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQL 107
Query: 154 ------VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207
V +A+EY+ S +HRD+ N L+ G +K++DFG L
Sbjct: 108 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG------------LSRYV 155
Query: 208 SDDKACTFVGT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
DD+ + VG+ + PPEVL S + +D+WA G ++++ S G P++
Sbjct: 156 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 29/173 (16%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE- 153
E V+ L H +V+L+ +++ E G L + +L E RF T +
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQL 122
Query: 154 ------VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207
V +A+EY+ S +HRD+ N L+ G +K++DFG L
Sbjct: 123 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG------------LSRYV 170
Query: 208 SDDKACTFVGT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
DD+ + VG+ + PPEVL S + +D+WA G ++++ S G P++
Sbjct: 171 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 29/173 (16%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE- 153
E V+ L H +V+L+ +++ E G L + +L E RF T +
Sbjct: 49 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQL 102
Query: 154 ------VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207
V +A+EY+ S +HRD+ N L+ G +K++DFG L
Sbjct: 103 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG------------LSRYV 150
Query: 208 SDDKACTFVGT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
DD+ + VG+ + PPEVL S + +D+WA G ++++ S G P++
Sbjct: 151 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 29/173 (16%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE- 153
E V+ L H +V+L+ +++ E G L + +L E RF T +
Sbjct: 60 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQL 113
Query: 154 ------VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207
V +A+EY+ S +HRD+ N L+ G +K++DFG L
Sbjct: 114 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG------------LSRYV 161
Query: 208 SDDKACTFVGT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
DD+ + VG+ + PPEVL S + +D+WA G ++++ S G P++
Sbjct: 162 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 113/256 (44%), Gaps = 31/256 (12%)
Query: 34 AFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTG---TVYALKIMDKKFITKENKTA 90
A R + + ++ ++ G G + +V R + G + A+K + + T+ +
Sbjct: 5 AVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY-TERQRRE 63
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFY 150
++ E ++ Q +HP ++RL ++ + + E E G L L ++ +F
Sbjct: 64 FLS-EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL------DSFLRLNDGQFT 116
Query: 151 TAEVV-------DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203
++V + Y+ M +HRD+ N+L+ ++ K++DFG + ++++
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN----- 171
Query: 204 PNAASDDKACTFVGTA---AYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+SD + +G + PE + T +D W+ G +++++S G P+ D S
Sbjct: 172 ---SSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS 228
Query: 260 EWLIFQRIIARDIRFP 275
+ I +D R P
Sbjct: 229 NQDVIN-AIEQDYRLP 243
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 23/224 (10%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFF 112
G G+ VV A A+K + + F + + K AY +L +++ ++H ++ L
Sbjct: 33 GSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL--VLMKVVNHKNIIGLLN 90
Query: 113 TFQDTFSL------YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
F SL Y+ +E + Q+ + L + + +++ ++++HS G+
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDAN--LSQVI-QMELDHERMSYLLYQMLVGIKHLHSAGI 147
Query: 167 IHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV 226
IHRD+KP N+++ +D +KI DFG + A + +V T Y PEV
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEV 196
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270
+ D+W++G + +M+ G F T + ++I +
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+L+ + +++ D+G + P Q+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 188 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 149 FYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-DGHIKIADFGSVKPMQDSRITVLPNAA 207
Y ++ A+ +IHS+G+ HRDIKP+NLL+ + D +K+ DFGS K ++P+
Sbjct: 145 IYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAK-------KLIPSEP 197
Query: 208 SDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267
S C+ A P +L ++ T DLW++GC +++ G F + RI
Sbjct: 198 SVAXICSRFYRA---PELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRI 254
Query: 268 I 268
I
Sbjct: 255 I 255
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLERIVLD 100
S + + LGK G GS+ V I++G +ALK + D ++ +E ++
Sbjct: 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELD---------IMK 55
Query: 101 QLDHPGVVRLFFTFQDT 117
LDH +++L F T
Sbjct: 56 VLDHVNIIKLVDYFYTT 72
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD--- 103
+E+ + G GS+ +VV+A A+KI+ +NK A++ +I + L+
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-------KNKKAFLNQAQIEVRLLELMN 108
Query: 104 -HPGVVRLF-------FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
H ++ + F F++ L + S +L +G +S + R + ++
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMC 167
Query: 156 DALEYIHS--MGLIHRDIKPENLLLT--ADGHIKIADFGSVKPMQDSRITVLPNAASDDK 211
AL ++ + + +IH D+KPEN+LL IKI DFGS + +
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS-------------SCQLGQR 214
Query: 212 ACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ + Y PEVL P D+W+LGC L +M +G F +E
Sbjct: 215 IYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVK---LERIVLDQLDHPGVVRL 110
G G++ +V+ + ID YA+K++ + I K ++A ++ L++I D +++ +V+
Sbjct: 44 GDGTFGRVLLCQHIDNKKYYAVKVV--RNIKKYTRSAKIEADILKKIQNDDINNNNIVKY 101
Query: 111 FFTFQDTFSLYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEYIHSMGLIH 168
F + + E G L++ IT + ++ + Y E++ AL Y+ M L H
Sbjct: 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTH 160
Query: 169 RDIKPENLLLT----ADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF--------V 216
D+KPEN+LL I + K +Q R D TF +
Sbjct: 161 TDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSII 220
Query: 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK 256
T Y PEV+ + +D+W+ GC L ++ +G+ F+
Sbjct: 221 NTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E ++ L H +VRL+ +Y+ E G L D + S G + + ++A
Sbjct: 57 EANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA 116
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + + YI IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 117 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK- 175
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +++W+ G LY++++ G P+
Sbjct: 176 --------WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD--- 103
+E+ + G GS+ +VV+A A+KI+ +NK A++ +I + L+
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-------KNKKAFLNQAQIEVRLLELMN 89
Query: 104 -HPGVVRLF-------FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
H ++ + F F++ L + S +L +G +S + R + ++
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMC 148
Query: 156 DALEYIHS--MGLIHRDIKPENLLLT--ADGHIKIADFGSVKPMQDSRITVLPNAASDDK 211
AL ++ + + +IH D+KPEN+LL IKI DFGS + +
Sbjct: 149 TALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS-------------SCQLGQR 195
Query: 212 ACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ + Y PEVL P D+W+LGC L +M +G F +E
Sbjct: 196 IYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD--- 103
+E+ + G GS+ +VV+A A+KI+ +NK A++ +I + L+
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-------KNKKAFLNQAQIEVRLLELMN 108
Query: 104 -HPGVVRLF-------FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVV 155
H ++ + F F++ L + S +L +G +S + R + ++
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRG-VSLNLTRKFAQQMC 167
Query: 156 DALEYIHS--MGLIHRDIKPENLLLTADGH--IKIADFGSVKPMQDSRITVLPNAASDDK 211
AL ++ + + +IH D+KPEN+LL IKI DFGS + +
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGS-------------SCQLGQR 214
Query: 212 ACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
+ + Y PEVL P D+W+LGC L +M +G F +E
Sbjct: 215 IYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QML 249
+M+
Sbjct: 217 EMV 219
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 25/159 (15%)
Query: 96 RIVLDQLDHPGVVRLFFTFQDTFSL-----YMALESCEGGELFDQITSKGH-LSEDEARF 149
R L ++ HP +V++F + T Y+ +E G L SKG L EA
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK---RSKGQKLPVAEAIA 186
Query: 150 YTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209
Y E++ AL Y+HS+GL++ D+KPEN++LT + +K+ D G+V SRI
Sbjct: 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAV-----SRI--------- 231
Query: 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQM 248
+ GT + PE++ + P T D++ +G TL +
Sbjct: 232 NSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 20/223 (8%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
++ + + G GSY V A +T A+K +++ F + ++ E +L++L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSD 85
Query: 106 GVVRLF-FTFQDTF----SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
++RL+ D LY+ LE + +L + L+E+ + ++ +
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA-------- 212
IH G+IHRD+KP N LL D +K+ DFG + + + T + N +++
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 213 ----CTFVGTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLS 250
+ V T Y PE +L T D+W+ GC ++L+
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LSQVI-QMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++G +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMG 216
Query: 247 QMLSGTSPFKDTSEWLIFQRIIAR 270
+M+ G F T + ++I +
Sbjct: 217 EMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 188 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 188 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 126 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 185
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 186 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 188 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 188 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 188 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 188 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 188 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 187 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 187 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 188 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 133 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 192
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 193 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HSMG++HRD+KP N+++ + +++ D+G + P Q+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 188 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 40/233 (17%)
Query: 39 QEHFSIQDFELGKIYGVGSYSKV------VRAKKIDTGTVYALKIMDKKFITKENKTAYV 92
+++ I D ELG G++ V +R K+ID A+K++ + T++ T +
Sbjct: 334 RDNLLIADIELG----CGNFGSVRQGVYRMRKKQIDV----AIKVLKQG--TEKADTEEM 383
Query: 93 KLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTA 152
E ++ QLD+P +VRL Q +L + +E GG L + K E+ A
Sbjct: 384 MREAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGK---REEIPVSNVA 439
Query: 153 EVVD----ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
E++ ++Y+ +HR++ N+LL + KI+DFG K + +
Sbjct: 440 ELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL-----------GA 488
Query: 209 DDKACTFVGTA----AYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
DD T + PE +N + +D+W+ G T+++ LS G P+K
Sbjct: 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 52 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 109
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 110 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 166
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 167 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 215
Query: 247 QML 249
+M+
Sbjct: 216 EMV 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QML 249
+M+
Sbjct: 217 EMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 54 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 112 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 168
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 169 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 247 QML 249
+M+
Sbjct: 218 EMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QML 249
+M+
Sbjct: 217 EMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 54 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 112 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 168
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 169 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 247 QML 249
+M+
Sbjct: 218 EMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 46 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 104 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 160
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 161 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209
Query: 247 QML 249
+M+
Sbjct: 210 EMV 212
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QMLSGTSPFKDTSEWLIFQRIIAR 270
+M+ G F T + ++I +
Sbjct: 217 EMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 19/234 (8%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+ +L K G G + +V A + T A+K M ++ E A E V+ L H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSMSVEAFLA----EANVMKTLQH 69
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARF--YTAEVVDALEYIH 162
+V+L +Y+ E G L D + S + + ++A++ + + +I
Sbjct: 70 DKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYV 222
IHRD++ N+L++A KIADFG + ++D+ T A K +
Sbjct: 129 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK---------WT 179
Query: 223 PPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRFP 275
PE +N T +D+W+ G L ++++ G P+ S + R + R R P
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RALERGYRMP 232
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 47 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 105 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 161
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 162 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 210
Query: 247 QML 249
+M+
Sbjct: 211 EMV 213
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 91 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 149 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 206 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
Query: 247 QML 249
+M+
Sbjct: 255 EMV 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 47 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 105 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 161
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 162 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 210
Query: 247 QML 249
+M+
Sbjct: 211 EMV 213
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 109/242 (45%), Gaps = 31/242 (12%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDTG---TVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
++ ++ G G + +V R + G + A+K + + T+ + ++ E ++ Q +H
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY-TERQRREFLS-EASIMGQFEH 74
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALE----- 159
P ++RL ++ + + E E G L L ++ +F ++V L
Sbjct: 75 PNIIRLEGVVTNSMPVMILTEFMENGAL------DSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 160 --YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG 217
Y+ M +HRD+ N+L+ ++ K++DFG + ++++ +SD + +G
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN--------SSDPTYTSSLG 180
Query: 218 TA---AYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDIR 273
+ PE + T +D W+ G +++++S G P+ D S + I +D R
Sbjct: 181 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN-AIEQDYR 239
Query: 274 FP 275
P
Sbjct: 240 LP 241
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLF--FTFQDTFS----LYMALES 126
A+K + + F + + K AY +L +++ ++H ++ L FT Q T +Y+ +E
Sbjct: 91 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 149 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ D+W++GC +
Sbjct: 206 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
Query: 247 QML 249
+M+
Sbjct: 255 EMV 257
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 24/245 (9%)
Query: 34 AFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVK 93
A+ P+E ++ K G G + +V A + T A+K M ++ E A
Sbjct: 182 AWEIPRESLKLE-----KKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSMSVEAFLA--- 232
Query: 94 LERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARF--YT 151
E V+ L H +V+L +Y+ E G L D + S + + ++
Sbjct: 233 -EANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 290
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDK 211
A++ + + +I IHRD++ N+L++A KIADFG + ++D+ T A K
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 350
Query: 212 ACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR 270
+ PE +N T +D+W+ G L ++++ G P+ S + R + R
Sbjct: 351 ---------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RALER 400
Query: 271 DIRFP 275
R P
Sbjct: 401 GYRMP 405
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 40/244 (16%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYA-LKI---MDKKFITKENKTAYVKLERI 97
F + + GK G G++ KVV A G A LK+ M K + K A + +I
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH---------------L 142
+ H +V L + + E C G+L + + K L
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 143 SEDEAR--------FYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI-KIADFGSVK 193
+++ R ++++V + ++ S IHRD+ N+LLT +GH+ KI DFG +
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLAR 206
Query: 194 P-MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-G 251
M DS V NA K ++ PE + T +D+W+ G L+++ S G
Sbjct: 207 DIMNDSNYIVKGNARLPVK---------WMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 257
Query: 252 TSPF 255
+P+
Sbjct: 258 LNPY 261
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 32/297 (10%)
Query: 25 PTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMD 79
P + + + A + F +LGK G G++ +V+ A K T A+K++
Sbjct: 9 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK 68
Query: 80 KKFITKENKTAYVKLERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS 138
+ E++ +L +I++ H VV L + L + +E C+ G L + S
Sbjct: 69 EGATHSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 127
Query: 139 KGH--------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184
K + L+ + Y+ +V +E++ S IHRD+ N+LL+ +
Sbjct: 128 KRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVV 187
Query: 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCT 244
KI DFG + + P+ A ++ PE + T +D+W+ G
Sbjct: 188 KICDFGLARDIXKD-----PDXVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 245 LYQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
L+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 240 LWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 118/295 (40%), Gaps = 30/295 (10%)
Query: 25 PTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMD 79
P + + + A + F LGK G G++ +V+ A K T A+K++
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK 66
Query: 80 KKFITKENKTAYVKLERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS 138
+ E++ +L +I++ H VV L + L + +E C+ G L + S
Sbjct: 67 EGATHSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 139 KGH------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
K + L+ + Y+ +V +E++ S IHRD+ N+LL+ +KI
Sbjct: 126 KRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 185
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + + P+ A ++ PE + T +D+W+ G L+
Sbjct: 186 XDFGLARDIYKD-----PDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 247 QMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
++ S G SP+ F R + R P+Y + PS RP
Sbjct: 238 EIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 292
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 23/170 (13%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAE- 153
E V+ L H +V+L+ +++ E G L + +L E RF T +
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN------YLREMRHRFQTQQL 107
Query: 154 ------VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207
V +A+EY+ S +HRD+ N L+ G +K++DFG + VL +
Sbjct: 108 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-------YVLDDEY 160
Query: 208 SDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ + F + PPEVL S + +D+WA G ++++ S G P++
Sbjct: 161 TSSRGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 58 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 115
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 116 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 172
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ DLW++GC +
Sbjct: 173 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMG 221
Query: 247 QML 249
+M+
Sbjct: 222 EMV 224
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 33 FAFRAPQE-------HFSIQDFELGKIYGVGSYSKVVRAKKIDTG---TVYALKIMDKKF 82
F F P E I ++ ++ G G + +V G A+K + +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 83 ITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHL 142
K+ + E ++ Q DHP V+ L + + + E E G L L
Sbjct: 74 TEKQRRDFLS--EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL------DSFL 125
Query: 143 SEDEARFYTAEVVDAL-------EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195
+++ +F ++V L +Y+ M +HRD+ N+L+ ++ K++DFG + +
Sbjct: 126 RQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 185
Query: 196 QDSRITVLPNAASDDKACTFVGTAA---YVPPEVLNSSPATFGNDLWALGCTLYQMLS-G 251
+D SD + +G + PE + T +D+W+ G +++++S G
Sbjct: 186 EDD--------TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 237
Query: 252 TSPFKDTSEWLIFQRIIARDIRFP 275
P+ D + + I +D R P
Sbjct: 238 ERPYWDMTNQDVIN-AIEQDYRLP 260
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 118/299 (39%), Gaps = 34/299 (11%)
Query: 25 PTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMD 79
P + + + A + F +LGK G G++ +V+ A K T A+K++
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 66
Query: 80 KKFITKENKTAYVKLERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS 138
+ E++ +L +I++ H VV L + L + +E C+ G L + S
Sbjct: 67 EGATHSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 139 KGH----------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG 182
K + L+ + Y+ +V +E++ S IHRD+ N+LL+
Sbjct: 126 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185
Query: 183 HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALG 242
+KI DFG + + V A ++ PE + T +D+W+ G
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDAR--------LPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 243 CTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
L+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 238 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 118/295 (40%), Gaps = 30/295 (10%)
Query: 25 PTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMD 79
P + + + A + F LGK G G++ +V+ A K T A+K++
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLK 66
Query: 80 KKFITKENKTAYVKLERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS 138
+ E++ +L +I++ H VV L + L + +E C+ G L + S
Sbjct: 67 EGATHSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 139 KGH------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
K + L+ + Y+ +V +E++ S IHRD+ N+LL+ +KI
Sbjct: 126 KRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 185
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + + P+ A ++ PE + T +D+W+ G L+
Sbjct: 186 CDFGLARDIYKD-----PDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 247 QMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
++ S G SP+ F R + R P+Y + PS RP
Sbjct: 238 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 292
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 117/298 (39%), Gaps = 33/298 (11%)
Query: 25 PTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMD 79
P + + + A + F LGK G G++ +V+ A K T A+K++
Sbjct: 8 PLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 67
Query: 80 KKFITKENKTAYVKLERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS 138
+ E++ +L +I++ H VV L + L + +E C+ G L + S
Sbjct: 68 EGATHSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 126
Query: 139 KGH---------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH 183
K + L+ + Y+ +V +E++ S IHRD+ N+LL+
Sbjct: 127 KRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 186
Query: 184 IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGC 243
+KI DFG + + V A ++ PE + T +D+W+ G
Sbjct: 187 VKICDFGLARDIXKDPDXVRKGDAR--------LPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 244 TLYQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
L+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 61 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK---- 175
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 176 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 118/299 (39%), Gaps = 34/299 (11%)
Query: 25 PTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMD 79
P + + + A + F +LGK G G++ +V+ A K T A+K++
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 66
Query: 80 KKFITKENKTAYVKLERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS 138
+ E++ +L +I++ H VV L + L + +E C+ G L + S
Sbjct: 67 EGATHSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 139 KGH----------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG 182
K + L+ + Y+ +V +E++ S IHRD+ N+LL+
Sbjct: 126 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185
Query: 183 HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALG 242
+KI DFG + + V A ++ PE + T +D+W+ G
Sbjct: 186 VVKICDFGLARDIYKDPDXVRKGDAR--------LPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 243 CTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
L+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 238 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 47 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 104
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 105 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 161
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + +V T Y PEV+ DLW++GC +
Sbjct: 162 LDFGLAR-----------TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMG 210
Query: 247 QML 249
+M+
Sbjct: 211 EMV 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 61 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK---- 175
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 176 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 31/181 (17%)
Query: 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKF---ITKENKTAYVK 93
A + ++ + EL KI G G + V + K G +YA+K K + ++N V
Sbjct: 2 AMKSRYTTEFHELEKI-GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV- 59
Query: 94 LERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----GHLSEDEARF 149
VL Q H VVR F + + + + E C GG L D I+ + E E +
Sbjct: 60 YAHAVLGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 117
Query: 150 YTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209
+V L YIHSM L+H DIKP N+ ++ T +PNAAS+
Sbjct: 118 LLLQVGRGLRYIHSMSLVHMDIKPSNIFISR--------------------TSIPNAASE 157
Query: 210 D 210
+
Sbjct: 158 E 158
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 56 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 114
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 115 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK---- 170
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 171 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 14/215 (6%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY-VKLERIVLDQLDHP 105
F LG+ G GS+ ++ I T A+K+ + K TK + Y K+ RI+ P
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKIYRILQGGTGIP 66
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMG 165
V R F D L M L +LF+ + K LS ++++ +E++HS
Sbjct: 67 NV-RWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKS 123
Query: 166 LIHRDIKPENLLL---TADGHIKIADFGSVKPMQDSRI-TVLPNAASDDKACTFVGTAAY 221
+HRDIKP+N L+ + I DFG K +D+ +P + + GTA Y
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKN----LTGTARY 179
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK 256
+ +DL +LG L L G+ P++
Sbjct: 180 ASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 62 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 120
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 121 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK---- 176
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 177 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 67 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 126 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK---- 181
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 182 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 67
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ +E G L D + ++ +S + ++ A+EY+
Sbjct: 68 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK---------WTA 178
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 61 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK---- 175
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 176 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
++E+ + G GSY V A + A+K +++ F + ++ E +L++L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSD 87
Query: 106 GVVRL--FFTFQDTF---SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEY 160
++RL +D LY+ LE + +L + L+E + ++ ++
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 161 IHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ-DSRITVL-------------PNA 206
IH G+IHRD+KP N LL D +KI DFG + + D I ++ P+
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 207 ASDDKACT-FVGTAAYVPPE-VLNSSPATFGNDLWALGCTLYQMLS 250
+ K T V T Y PE +L T D+W+ GC ++L+
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 63 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 121
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 122 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK---- 177
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 178 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 69
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ +E G L D + ++ +S + ++ A+EY+
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 180
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 66 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 124
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 125 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK---- 180
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 181 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 61 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK---- 175
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 176 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 67 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 126 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK---- 181
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 182 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 69 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 127
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 128 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK---- 183
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 184 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 69
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ +E G L D + ++ +S + ++ A+EY+
Sbjct: 70 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 180
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 20/214 (9%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI-VLDQLDHPGVVRLFF 112
G G+Y +V +A IDT T + I + +E + + +L +L H ++ L
Sbjct: 43 GEGTYGEVYKA--IDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 113 TFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIK 172
L++ E E +L + +S + + ++++ + + HS +HRD+K
Sbjct: 101 VIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLK 159
Query: 173 PENLLLTADGH-----IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEV- 226
P+NLLL+ +KI DFG +R +P + T Y PPE+
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGL------ARAFGIPIRQFTHEIITL----WYRPPEIL 209
Query: 227 LNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
L S + D+W++ C +ML T F SE
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE 243
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 70 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 128
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 129 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK---- 184
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 185 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 71 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 129
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHRD++ N+L++ KIADFG + ++D+ T A K
Sbjct: 130 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK---- 185
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 186 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 118/299 (39%), Gaps = 34/299 (11%)
Query: 25 PTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMD 79
P + + + A + F +LGK G G++ +V+ A K T A+K++
Sbjct: 7 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 66
Query: 80 KKFITKENKTAYVKLERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS 138
+ E++ +L +I++ H VV L + L + +E C+ G L + S
Sbjct: 67 EGATHSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
Query: 139 KGH----------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG 182
K + L+ + Y+ +V +E++ S IHRD+ N+LL+
Sbjct: 126 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 185
Query: 183 HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALG 242
+KI DFG + + V A ++ PE + T +D+W+ G
Sbjct: 186 VVKICDFGLARDIYKDPDYVRKGDAR--------LPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 243 CTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
L+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 238 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 34/296 (11%)
Query: 28 QRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMDKKF 82
+ ++ + A + F +LGK G G++ +V+ A K T A+K++ +
Sbjct: 1 EHAERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 83 ITKENKTAYVKLERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGH 141
E++ +L +I++ H VV L + L + +E C+ G L + SK +
Sbjct: 61 THSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN 119
Query: 142 ----------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIK 185
L+ + Y+ +V +E++ S IHRD+ N+LL+ +K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 179
Query: 186 IADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTL 245
I DFG + + P+ A ++ PE + T +D+W+ G L
Sbjct: 180 ICDFGLARDIXKD-----PDXVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 246 YQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVY--ALKIMDKKFITKENKTAYVKLERIVLDQL 102
D + + G G++ +V++A+ G A+K M K++ +K++ + ++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLG 83
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI----------------TSKGHLSEDE 146
HP ++ L + LY+A+E G L D + ++ LS +
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 147 ARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ---DSRITVL 203
+ A+V ++Y+ IHRD+ N+L+ + KIADFG + + + L
Sbjct: 144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 203
Query: 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
P ++ E LN S T +D+W+ G L++++S G +P+
Sbjct: 204 P--------------VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 242
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 34/299 (11%)
Query: 25 PTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMD 79
P + + + A + F +LGK G G++ +V+ A K T A+K++
Sbjct: 44 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 103
Query: 80 KKFITKENKTAYVKLERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS 138
+ E++ +L +I++ H VV L + L + +E C+ G L + S
Sbjct: 104 EGATHSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 162
Query: 139 KGH----------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG 182
K + L+ + Y+ +V +E++ S IHRD+ N+LL+
Sbjct: 163 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 222
Query: 183 HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALG 242
+KI DFG + + P+ A ++ PE + T +D+W+ G
Sbjct: 223 VVKICDFGLARDIYKD-----PDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFG 274
Query: 243 CTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
L+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 275 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 333
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 118/299 (39%), Gaps = 34/299 (11%)
Query: 25 PTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMD 79
P + + + A + F +LGK G G++ +V+ A K T A+K++
Sbjct: 9 PLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 68
Query: 80 KKFITKENKTAYVKLERIVLDQLDHPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS 138
+ E++ +L +I++ H VV L + L + +E C+ G L + S
Sbjct: 69 EGATHSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 127
Query: 139 KGH----------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG 182
K + L+ + Y+ +V +E++ S IHRD+ N+LL+
Sbjct: 128 KRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 187
Query: 183 HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALG 242
+KI DFG + + V A ++ PE + T +D+W+ G
Sbjct: 188 VVKICDFGLARDIYKDPDYVRKGDAR--------LPLKWMAPETIFDRVYTIQSDVWSFG 239
Query: 243 CTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
L+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 240 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 298
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 31/176 (17%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKF---ITKENKTAYVKLERIV 98
++ + EL KI G G + V + K G +YA+K K + ++N V V
Sbjct: 7 YTTEFHELEKI-GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAV 64
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----GHLSEDEARFYTAEV 154
L Q H VVR F + + + + E C GG L D I+ + E E + +V
Sbjct: 65 LGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 122
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDD 210
L YIHSM L+H DIKP N+ ++ T +PNAAS++
Sbjct: 123 GRGLRYIHSMSLVHMDIKPSNIFISR--------------------TSIPNAASEE 158
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 31/176 (17%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKF---ITKENKTAYVKLERIV 98
++ + EL KI G G + V + K G +YA+K K + ++N V V
Sbjct: 9 YTTEFHELEKI-GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAV 66
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----GHLSEDEARFYTAEV 154
L Q H VVR F + + + + E C GG L D I+ + E E + +V
Sbjct: 67 LGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 124
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDD 210
L YIHSM L+H DIKP N+ ++ T +PNAAS++
Sbjct: 125 GRGLRYIHSMSLVHMDIKPSNIFISR--------------------TSIPNAASEE 160
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 111/293 (37%), Gaps = 61/293 (20%)
Query: 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKF---ITKENKTAYVKLERIV 98
++ + EL KI G G + V + K G +YA+K K + ++N V V
Sbjct: 5 YTTEFHELEKI-GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV-YAHAV 62
Query: 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----GHLSEDEARFYTAEV 154
L Q H VVR F + + + + E C GG L D I+ + E E + +V
Sbjct: 63 LGQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 120
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS-----D 209
L YIHSM L+H DIKP N+ ++ T +PNAAS D
Sbjct: 121 GRGLRYIHSMSLVHMDIKPSNIFISR--------------------TSIPNAASEEGDED 160
Query: 210 DKACTFV--------------------GTAAYVPPEVLNSSPATFGN-DLWALGCTLYQM 248
D A V G + ++ EVL + D++AL T+
Sbjct: 161 DWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVXA 220
Query: 249 LSGTSPF-KDTSEWLIFQRIIARDIRFPNYFSXXXXXXXXXXXXXXPSGRPGA 300
+G P ++ +W ++ R R P S P RP A
Sbjct: 221 -AGAEPLPRNGDQWHEIRQ--GRLPRIPQVLSQEFTELLKVMIHPDPERRPSA 270
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 17/170 (10%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAE 153
E V+ +L HP +V+L+ + + + E E G L D + T +G + + +
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 111
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
V + + Y+ +IHRD+ N L+ + IK++DFG + DD+
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFG------------MTRFVLDDQYT 159
Query: 214 TFVGT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ GT + PEV + S + +D+W+ G ++++ S G P+++ S
Sbjct: 160 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVY--ALKIMDKKFITKENKTAYVKLERIVLDQL 102
D + + G G++ +V++A+ G A+K M K++ +K++ + ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLG 73
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI----------------TSKGHLSEDE 146
HP ++ L + LY+A+E G L D + ++ LS +
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 147 ARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ---DSRITVL 203
+ A+V ++Y+ IHRD+ N+L+ + KIADFG + + + L
Sbjct: 134 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 193
Query: 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
P ++ E LN S T +D+W+ G L++++S G +P+
Sbjct: 194 P--------------VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 232
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 117/296 (39%), Gaps = 34/296 (11%)
Query: 28 QRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMDKKF 82
+ ++ + A + F +LGK G G++ +V+ A K T A+K++ +
Sbjct: 1 EHAERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 83 ITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL-ESCEGGELFDQITSKGH 141
E++ +L +I++ H VV L M + E C+ G L + SK +
Sbjct: 61 THSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN 119
Query: 142 ----------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIK 185
L+ + Y+ +V +E++ S IHRD+ N+LL+ +K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 179
Query: 186 IADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTL 245
I DFG + + P+ A ++ PE + T +D+W+ G L
Sbjct: 180 ICDFGLARDIXKD-----PDXVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 246 YQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 67
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ +S + ++ A+EY+
Sbjct: 68 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIK---------WTA 178
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 17/170 (10%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAE 153
E V+ +L HP +V+L+ + + + E E G L D + T +G + + +
Sbjct: 55 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 114
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
V + + Y+ +IHRD+ N L+ + IK++DFG + DD+
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG------------MTRFVLDDQYT 162
Query: 214 TFVGT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ GT + PEV + S + +D+W+ G ++++ S G P+++ S
Sbjct: 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAEVVD 156
V+ +L HP +V+L+ + + + E E G L D + T +G + + +V +
Sbjct: 55 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
+ Y+ +IHRD+ N L+ + IK++DFG + DD+ +
Sbjct: 115 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG------------MTRFVLDDQYTSST 162
Query: 217 GT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
GT + PEV + S + +D+W+ G ++++ S G P+++ S
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 101 QLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALE 159
+L HP +V+ + + +Y+ E G L + + S G L + +V + +
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA 118
Query: 160 YIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGT- 218
++ S IHRD+ N L+ D +K++DFG + DD+ + VGT
Sbjct: 119 FLESHQFIHRDLAARNCLVDRDLCVKVSDFG------------MTRYVLDDQYVSSVGTK 166
Query: 219 --AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PEV + + +D+WA G ++++ S G P+
Sbjct: 167 FPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 74
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ +E G L D + ++ ++ + ++ A+EY+
Sbjct: 75 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 185
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 17/170 (10%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAE 153
E V+ +L HP +V+L+ + + + E E G L D + T +G + + +
Sbjct: 72 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLD 131
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
V + + Y+ +IHRD+ N L+ + IK++DFG + DD+
Sbjct: 132 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG------------MTRFVLDDQYT 179
Query: 214 TFVGT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ GT + PEV + S + +D+W+ G ++++ S G P+++ S
Sbjct: 180 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 229
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAEVVD 156
V+ +L HP +V+L+ + + + E E G L D + T +G + + +V +
Sbjct: 53 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 112
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
+ Y+ +IHRD+ N L+ + IK++DFG + DD+ +
Sbjct: 113 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG------------MTRFVLDDQYTSST 160
Query: 217 GT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
GT + PEV + S + +D+W+ G ++++ S G P+++ S
Sbjct: 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 69
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ +S + ++ A+EY+
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 180
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 69
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ +S + ++ A+EY+
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 180
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 70
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ +E G L D + ++ ++ + ++ A+EY+
Sbjct: 71 NLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK---------WTA 181
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 74
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ +S + ++ A+EY+
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 134
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 185
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVV 155
++ QL H +VRL+ +Y+ E E G L D + S L+ ++ A++
Sbjct: 57 LMKQLQHQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 115
Query: 156 DALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215
+ + +I IHR+++ N+L++ KIADFG + ++D+ T A K
Sbjct: 116 EGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK---- 171
Query: 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE +N T +D+W+ G L ++++ G P+
Sbjct: 172 -----WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTA 152
E V+ ++ HP +V+L Y+ E G L D + ++ +S +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ A+EY+ IHRD+ N L+ + +K+ADFG + M T A K
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK- 175
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE L + + +D+WA G L+++ + G SP+
Sbjct: 176 --------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 17/167 (10%)
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAEVVD 156
V+ +L HP +V+L+ + + + E E G L D + T +G + + +V +
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115
Query: 157 ALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216
+ Y+ +IHRD+ N L+ + IK++DFG + DD+ +
Sbjct: 116 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG------------MTRFVLDDQYTSST 163
Query: 217 GT---AAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
GT + PEV + S + +D+W+ G ++++ S G P+++ S
Sbjct: 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 117/296 (39%), Gaps = 34/296 (11%)
Query: 28 QRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMDKKF 82
+ ++ + A + F +LGK G G++ +V+ A K T A+K++ +
Sbjct: 1 EHAERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 83 ITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL-ESCEGGELFDQITSKGH 141
E++ +L +I++ H VV L M + E C+ G L + SK +
Sbjct: 61 THSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN 119
Query: 142 ----------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIK 185
L+ + Y+ +V +E++ S IHRD+ N+LL+ +K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 179
Query: 186 IADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTL 245
I DFG + + P+ A ++ PE + T +D+W+ G L
Sbjct: 180 ICDFGLARDIYKD-----PDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 246 YQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLT-ADGHIKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HS G++HRD+KP N+++ +++ D+G + P Q+
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE 193
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 194 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 73
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 133
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 184
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 185 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVY--ALKIMDKKFITKENKTAYVKLERIVLDQL 102
D + + G G++ +V++A+ G A+K M K++ +K++ + ++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLG 80
Query: 103 DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI----------------TSKGHLSEDE 146
HP ++ L + LY+A+E G L D + ++ LS +
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 147 ARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ---DSRITVL 203
+ A+V ++Y+ IHR++ N+L+ + KIADFG + + + L
Sbjct: 141 LLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 200
Query: 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
P ++ E LN S T +D+W+ G L++++S G +P+
Sbjct: 201 P--------------VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 239
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 116/296 (39%), Gaps = 34/296 (11%)
Query: 28 QRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMDKKF 82
+ + + A + F +LGK G G++ +V+ A K T A+K++ +
Sbjct: 1 EHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA 60
Query: 83 ITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL-ESCEGGELFDQITSKGH 141
E++ +L +I++ H VV L M + E C+ G L + SK +
Sbjct: 61 THSEHRALMSEL-KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN 119
Query: 142 ----------------LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIK 185
L+ + Y+ +V +E++ S IHRD+ N+LL+ +K
Sbjct: 120 EFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 179
Query: 186 IADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTL 245
I DFG + + P+ A ++ PE + T +D+W+ G L
Sbjct: 180 ICDFGLARDIYKD-----PDYVRKGDARL---PLKWMAPETIFDRVYTIQSDVWSFGVLL 231
Query: 246 YQMLS-GTSPFKDTSEWLIFQRIIARDIRF--PNYFSXXXXXXXXXXXXXXPSGRP 298
+++ S G SP+ F R + R P+Y + PS RP
Sbjct: 232 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 74
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK---------WTA 185
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 19/119 (15%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLT-ADGHIKIADFGSVK---PMQD 197
L++ + RFY E++ AL+Y HS G++HRD+KP N+++ +++ D+G + P Q+
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE 188
Query: 198 SRITVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC L M+ PF
Sbjct: 189 YNVR--------------VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 69
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 180
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 69
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 70 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 180
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 74
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 185
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E ++ Q DHP ++ L + + + E E G L L +++ +F ++
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL------DTFLKKNDGQFTVIQL 126
Query: 155 VDAL-------EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207
V L +Y+ MG +HRD+ N+L+ ++ K++DFG + ++D P AA
Sbjct: 127 VGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-----PEAA 181
Query: 208 SDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259
+ + PE + T +D+W+ G +++++S G P+ + +
Sbjct: 182 YTTRGGKI--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 71
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 182
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 27 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 82
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 83 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 142
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 143 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 193
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 194 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 74
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 75 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 134
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 185
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 71
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 182
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G++ +VV A+ + A+K++ K+
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ +E G L + + ++
Sbjct: 88 VSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDI 146
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 207 IN--------NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 254 PF 255
P+
Sbjct: 259 PY 260
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 70
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 71 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK---------WTA 181
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 71
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 72 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHRD+ N L+ + +K+ADFG + M T A K +
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK---------WTA 182
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 69 TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--FSLYMALES 126
TG + A+K + K ++++ + K E +L L H +++ +D SL + +E
Sbjct: 59 TGEMVAVKAL-KADAGPQHRSGW-KQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEY 116
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
G L D + + + + + ++ + + Y+H+ IHRD+ N+LL D +KI
Sbjct: 117 VPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKI 175
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG K + + D + F + PE L + +D+W+ G TLY
Sbjct: 176 GDFGLAKAVPEGHEXY--RVREDGDSPVF-----WYAPECLKEYKFYYASDVWSFGVTLY 228
Query: 247 QMLS 250
++L+
Sbjct: 229 ELLT 232
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G++ +VV A+ + A+K++ K+
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ +E G L + + ++
Sbjct: 88 VSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 207 IN--------NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 254 PF 255
P+
Sbjct: 259 PY 260
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + V T Y PEV+ DLW++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMG 216
Query: 247 QML 249
+M+
Sbjct: 217 EMV 219
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 276
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ +S + ++ A+EY+
Sbjct: 277 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHR++ N L+ + +K+ADFG + M T A K +
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 387
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 388 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTA 152
E V+ ++ HP +V+L Y+ E G L D + ++ ++ +
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMAT 137
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ A+EY+ IHRD+ N L+ + +K+ADFG + M T A K
Sbjct: 138 QISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK- 196
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE L + + +D+WA G L+++ + G SP+
Sbjct: 197 --------WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 34/269 (12%)
Query: 12 LRIEGNNNSSTNCPTVQRSKSFAF-RAPQEHFSIQDFELGKIYGVGSYSKVVRAKKI--- 67
+RI +S+ + P + + P+ F LGK G G + +VV A+ +
Sbjct: 47 VRITTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGID 106
Query: 68 ----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123
A+K++ K+ ++E + + H ++ L LY+
Sbjct: 107 KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKNIINLLGACTQDGPLYVI 165
Query: 124 LESCEGGELFDQITSK-----------GHLSEDEARFY-----TAEVVDALEYIHSMGLI 167
+E G L + + ++ + E++ F T ++ +EY+ S I
Sbjct: 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 225
Query: 168 HRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
HRD+ N+L+T + +KIADFG + + N K ++ PE L
Sbjct: 226 HRDLAARNVLVTENNVMKIADFGLARDIN--------NIDYYKKTTNGRLPVKWMAPEAL 277
Query: 228 NSSPATFGNDLWALGCTLYQMLS-GTSPF 255
T +D+W+ G ++++ + G SP+
Sbjct: 278 FDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 30/254 (11%)
Query: 30 SKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK----KIDTGTVYALKIMDKKFITK 85
S +F R P + F + + + G G++ V + + +TG V A+K + + T+
Sbjct: 1 SGAFEDRDPTQ-FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTE 57
Query: 86 ENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITS-KGHL 142
E+ + + E +L L H +V+ +L + +E G L D + K +
Sbjct: 58 EHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 116
Query: 143 SEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202
+ YT+++ +EY+ + IHRD+ N+L+ + +KI DFG K V
Sbjct: 117 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------V 168
Query: 203 LPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
LP DK V P PE L S + +D+W+ G LY++ + K
Sbjct: 169 LPQ----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--KS 222
Query: 258 TSEWLIFQRIIARD 271
S F R+I D
Sbjct: 223 KSPPAEFMRMIGND 236
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY--VKLERIVLDQLDHPGVV 108
K+ G G + V + I G + + K K + ++ V + + LDH +V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLI 167
RL + SL + + G L D + +G L + ++ + Y+ G++
Sbjct: 97 RLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 155
Query: 168 HRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
HR++ N+LL + +++ADFG +LP DDK + + A P + +
Sbjct: 156 HRNLAARNVLLKSPSQVQVADFGVAD--------LLP---PDDKQLLY--SEAKTPIKWM 202
Query: 228 NSSPATFG-----NDLWALGCTLYQMLS-GTSPF 255
FG +D+W+ G T++++++ G P+
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 236
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY--VKLERIVLDQLDHPGVV 108
K+ G G + V + I G + + K K + ++ V + + LDH +V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 109 RLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLI 167
RL + SL + + G L D + +G L + ++ + Y+ G++
Sbjct: 79 RLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 137
Query: 168 HRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL 227
HR++ N+LL + +++ADFG +LP DDK + + A P + +
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGVAD--------LLP---PDDKQLLY--SEAKTPIKWM 184
Query: 228 NSSPATFG-----NDLWALGCTLYQMLS-GTSPF 255
FG +D+W+ G T++++++ G P+
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G++ +VV A+ + A+K++ K T+E+ +
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEEDLSD 86
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
V ++ H ++ L LY+ +E G L + + ++
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 207 IN--------NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 254 PF 255
P+
Sbjct: 259 PY 260
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 30/254 (11%)
Query: 30 SKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK----KIDTGTVYALKIMDKKFITK 85
S +F R P + F + + + G G++ V + + +TG V A+K + + T+
Sbjct: 3 SGAFEDRDPTQ-FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTE 59
Query: 86 ENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITS-KGHL 142
E+ + + E +L L H +V+ +L + +E G L D + K +
Sbjct: 60 EHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 118
Query: 143 SEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202
+ YT+++ +EY+ + IHRD+ N+L+ + +KI DFG K V
Sbjct: 119 DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------V 170
Query: 203 LPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD 257
LP DK V P PE L S + +D+W+ G LY++ + K
Sbjct: 171 LPQ----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--KS 224
Query: 258 TSEWLIFQRIIARD 271
S F R+I D
Sbjct: 225 KSPPAEFMRMIGND 238
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 18/236 (7%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAK----KIDTGTVYALKIMDKKFITKENKTAYVKLER 96
HF + + + G G + KV + +TG A+K + + + N A +K E
Sbjct: 5 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE--SGGNHIADLKKEI 62
Query: 97 IVLDQLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAE 153
+L L H +V+ T + + +E G L + + +K ++ + Y +
Sbjct: 63 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ 122
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ ++Y+ S +HRD+ N+L+ ++ +KI DFG K ++ + DD+
Sbjct: 123 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX---TVKDDRD- 178
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA 269
+ PE L S +D+W+ G TL+++L+ D+S +F ++I
Sbjct: 179 ---SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD--SDSSPMALFLKMIG 229
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 18/236 (7%)
Query: 41 HFSIQDFELGKIYGVGSYSKVVRAK----KIDTGTVYALKIMDKKFITKENKTAYVKLER 96
HF + + + G G + KV + +TG A+K + + + N A +K E
Sbjct: 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE--SGGNHIADLKKEI 74
Query: 97 IVLDQLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAE 153
+L L H +V+ T + + +E G L + + +K ++ + Y +
Sbjct: 75 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ 134
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ ++Y+ S +HRD+ N+L+ ++ +KI DFG K ++ + DD+
Sbjct: 135 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX---TVKDDRD- 190
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA 269
+ PE L S +D+W+ G TL+++L+ D+S +F ++I
Sbjct: 191 ---SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD--SDSSPMALFLKMIG 241
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 30/252 (11%)
Query: 32 SFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK----KIDTGTVYALKIMDKKFITKEN 87
+F R P + F + + + G G++ V + + +TG V A+K + T+E+
Sbjct: 2 AFEDRDPTQ-FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEH 58
Query: 88 KTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITS-KGHLSE 144
+ + E +L L H +V+ +L + +E G L D + K +
Sbjct: 59 LRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 117
Query: 145 DEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204
+ YT+++ +EY+ + IHRD+ N+L+ + +KI DFG K VLP
Sbjct: 118 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLP 169
Query: 205 NAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
DK V P PE L S + +D+W+ G LY++ + K S
Sbjct: 170 Q----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--KSKS 223
Query: 260 EWLIFQRIIARD 271
F R+I D
Sbjct: 224 PPAEFMRMIGND 235
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 30/252 (11%)
Query: 32 SFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK----KIDTGTVYALKIMDKKFITKEN 87
+F R P + F + + + G G++ V + + +TG V A+K + T+E+
Sbjct: 4 AFEDRDPTQ-FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEH 60
Query: 88 KTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITS-KGHLSE 144
+ + E +L L H +V+ +L + +E G L D + K +
Sbjct: 61 LRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 119
Query: 145 DEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204
+ YT+++ +EY+ + IHRD+ N+L+ + +KI DFG K VLP
Sbjct: 120 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLP 171
Query: 205 NAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
DK V P PE L S + +D+W+ G LY++ + K S
Sbjct: 172 Q----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--KSKS 225
Query: 260 EWLIFQRIIARD 271
F R+I D
Sbjct: 226 PPAEFMRMIGND 237
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E V+ QLD+P +VR+ + S + +E E G L + H+ + +V
Sbjct: 62 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++Y+ +HRD+ N+LL + KI+DFG K ++ + KA T
Sbjct: 121 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE--------NXYKAQT 172
Query: 215 F-VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ PE +N + +D+W+ G +++ S G P++
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G++ +VV A+ + A+K++ K+
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ +E G L + + ++
Sbjct: 88 VSEMEMMKMIG-KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 207 IN--------NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 254 PF 255
P+
Sbjct: 259 PY 260
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 30/252 (11%)
Query: 32 SFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK----KIDTGTVYALKIMDKKFITKEN 87
+F R P + F + + + G G++ V + + +TG V A+K + T+E+
Sbjct: 29 AFEDRDPTQ-FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEH 85
Query: 88 KTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITS-KGHLSE 144
+ + E +L L H +V+ +L + +E G L D + K +
Sbjct: 86 LRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH 144
Query: 145 DEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204
+ YT+++ +EY+ + IHRD+ N+L+ + +KI DFG K VLP
Sbjct: 145 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLP 196
Query: 205 NAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
DK V P PE L S + +D+W+ G LY++ + K S
Sbjct: 197 Q----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--KSKS 250
Query: 260 EWLIFQRIIARD 271
F R+I D
Sbjct: 251 PPAEFMRMIGND 262
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 74 ALKIMDKKFITKEN-KTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL------YMALES 126
A+K + + F + + K AY +L +++ ++H ++ L F SL Y+ +E
Sbjct: 53 AIKKLSRPFQNQTHAKRAYREL--VLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ Q+ + L + + +++ ++++HS G+IHRD+KP N+++ +D +KI
Sbjct: 111 MDAN--LCQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG + A + V T Y PEV+ D+W++GC +
Sbjct: 168 LDFGLAR-----------TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 247 QML 249
+M+
Sbjct: 217 EMV 219
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 97/232 (41%), Gaps = 17/232 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 315
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 316 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 375
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHR++ N L+ + +K+ADFG + M T A K +
Sbjct: 376 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 426
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDIRF 274
PE L + + +D+WA G L+++ + G SP+ +++ ++ +D R
Sbjct: 427 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRM 477
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 68 DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALE 125
+TG V A+K + T+E+ + + E +L L H +V+ +L + +E
Sbjct: 55 NTGEVVAVKKLQHS--TEEHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 111
Query: 126 SCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184
G L D + K + + YT+++ +EY+ + IHRD+ N+L+ + +
Sbjct: 112 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 171
Query: 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLW 239
KI DFG K VLP DK V P PE L S + +D+W
Sbjct: 172 KIGDFGLTK--------VLPQ----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 219
Query: 240 ALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271
+ G LY++ + K S F R+I D
Sbjct: 220 SFGVVLYELFTYIE--KSKSPPAEFMRMIGND 249
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 68 DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALE 125
+TG V A+K + T+E+ + + E +L L H +V+ +L + +E
Sbjct: 37 NTGEVVAVKKLQHS--TEEHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93
Query: 126 SCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184
G L D + K + + YT+++ +EY+ + IHRD+ N+L+ + +
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 153
Query: 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLW 239
KI DFG K VLP DK V P PE L S + +D+W
Sbjct: 154 KIGDFGLTK--------VLPQ----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 201
Query: 240 ALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271
+ G LY++ + K S F R+I D
Sbjct: 202 SFGVVLYELFTYIE--KSKSPPAEFMRMIGND 231
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 68 DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALE 125
+TG V A+K + T+E+ + + E +L L H +V+ +L + +E
Sbjct: 55 NTGEVVAVKKLQHS--TEEHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 111
Query: 126 SCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184
G L D + K + + YT+++ +EY+ + IHRD+ N+L+ + +
Sbjct: 112 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 171
Query: 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLW 239
KI DFG K VLP DK V P PE L S + +D+W
Sbjct: 172 KIGDFGLTK--------VLPQ----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 219
Query: 240 ALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271
+ G LY++ + K S F R+I D
Sbjct: 220 SFGVVLYELFTYIE--KSKSPPAEFMRMIGND 249
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 104/250 (41%), Gaps = 31/250 (12%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTG---TVYALKIMDKKFITKENKTAYVKLER 96
+ I ++ ++ G G + +V G A+K + + K+ + E
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLS--EA 59
Query: 97 IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVD 156
++ Q DHP V+ L + + + E E G L L +++ +F ++V
Sbjct: 60 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL------DSFLRQNDGQFTVIQLVG 113
Query: 157 AL-------EYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209
L +Y+ M +HR + N+L+ ++ K++DFG + ++D SD
Sbjct: 114 MLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDD--------TSD 165
Query: 210 DKACTFVGTAA---YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQ 265
+ +G + PE + T +D+W+ G +++++S G P+ D + +
Sbjct: 166 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 225
Query: 266 RIIARDIRFP 275
I +D R P
Sbjct: 226 -AIEQDYRLP 234
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 68 DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALE 125
+TG V A+K + T+E+ + + E +L L H +V+ +L + +E
Sbjct: 35 NTGEVVAVKKLQHS--TEEHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 91
Query: 126 SCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184
G L D + K + + YT+++ +EY+ + IHRD+ N+L+ + +
Sbjct: 92 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 151
Query: 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLW 239
KI DFG K VLP DK V P PE L S + +D+W
Sbjct: 152 KIGDFGLTK--------VLPQ----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 199
Query: 240 ALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271
+ G LY++ + K S F R+I D
Sbjct: 200 SFGVVLYELFTYIE--KSKSPPAEFMRMIGND 229
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 68 DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALE 125
+TG V A+K + + T+E+ + + E +L L H +V+ +L + +E
Sbjct: 40 NTGEVVAVKKL--QHSTEEHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 96
Query: 126 SCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184
G L D + K + + YT+++ +EY+ + IHRD+ N+L+ + +
Sbjct: 97 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 156
Query: 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLW 239
KI DFG K VLP DK V P PE L S + +D+W
Sbjct: 157 KIGDFGLTK--------VLPQ----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 204
Query: 240 ALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271
+ G LY++ + K S F R+I D
Sbjct: 205 SFGVVLYELFTYIE--KSKSPPAEFMRMIGND 234
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 68 DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALE 125
+TG V A+K + T+E+ + + E +L L H +V+ +L + +E
Sbjct: 36 NTGEVVAVKKLQHS--TEEHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 92
Query: 126 SCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184
G L D + K + + YT+++ +EY+ + IHRD+ N+L+ + +
Sbjct: 93 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 152
Query: 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLW 239
KI DFG K VLP DK V P PE L S + +D+W
Sbjct: 153 KIGDFGLTK--------VLPQ----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 200
Query: 240 ALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271
+ G LY++ + K S F R+I D
Sbjct: 201 SFGVVLYELFTYIE--KSKSPPAEFMRMIGND 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E V+ QLD+P +VR+ + S + +E E G L + H+ + +V
Sbjct: 62 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++Y+ +HRD+ N+LL + KI+DFG K ++ A + K
Sbjct: 121 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--KAQTHGK--- 175
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ PE +N + +D+W+ G +++ S G P++
Sbjct: 176 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 69 TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--FSLYMALES 126
TG + A+K + K ++++ + K E +L L H +++ +D SL + +E
Sbjct: 42 TGEMVAVKAL-KADCGPQHRSGW-KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
G L D + + + + + ++ + + Y+HS IHR++ N+LL D +KI
Sbjct: 100 VPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKI 158
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG K + + D + F + PE L + +D+W+ G TLY
Sbjct: 159 GDFGLAKAVPEGHEYY--RVREDGDSPVF-----WYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 247 QMLS 250
++L+
Sbjct: 212 ELLT 215
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 40/247 (16%)
Query: 38 PQEH---FSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMDKKFITKENKT 89
P +H F GK G G++ KVV A K D A+K++ E +
Sbjct: 13 PYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREA 72
Query: 90 AYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--------- 139
+L+ VL L +H +V L + E C G+L + + K
Sbjct: 73 LMSELK--VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 130
Query: 140 ---------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFG 190
L ++ ++ +V + ++ S IHRD+ N+LLT KI DFG
Sbjct: 131 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG 190
Query: 191 SVKPMQ-DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML 249
+ ++ DS V NA K ++ PE + + TF +D+W+ G L+++
Sbjct: 191 LARDIKNDSNYVVKGNARLPVK---------WMAPESIFNCVYTFESDVWSYGIFLWELF 241
Query: 250 S-GTSPF 255
S G+SP+
Sbjct: 242 SLGSSPY 248
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 89/213 (41%), Gaps = 16/213 (7%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
D + G G Y +V A+K + + + E ++K E V+ ++ HP
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---FLK-EAAVMKEIKHP 273
Query: 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQI--TSKGHLSEDEARFYTAEVVDALEYIHS 163
+V+L Y+ E G L D + ++ ++ + ++ A+EY+
Sbjct: 274 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 333
Query: 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP 223
IHR++ N L+ + +K+ADFG + M T A K +
Sbjct: 334 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK---------WTA 384
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
PE L + + +D+WA G L+++ + G SP+
Sbjct: 385 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 68 DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALE 125
+TG V A+K + + T+E+ + + E +L L H +V+ +L + +E
Sbjct: 37 NTGEVVAVKKL--QHSTEEHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93
Query: 126 SCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184
G L D + K + + YT+++ +EY+ + IHRD+ N+L+ + +
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 153
Query: 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLW 239
KI DFG K VLP DK V P PE L S + +D+W
Sbjct: 154 KIGDFGLTK--------VLPQ----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 201
Query: 240 ALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271
+ G LY++ + K S F R+I D
Sbjct: 202 SFGVVLYELFTYIE--KSKSPPAEFMRMIGND 231
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E V+ QLD+P +VR+ + S + +E E G L + H+ + +V
Sbjct: 68 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 126
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++Y+ +HRD+ N+LL + KI+DFG K ++ A + K
Sbjct: 127 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--KAQTHGK--- 181
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ PE +N + +D+W+ G +++ S G P++
Sbjct: 182 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G++ +VV A+ + A+K++ K+
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ +E G L + + ++
Sbjct: 88 VSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ + I N + ++ PE L T +D+W+ G ++++ + G S
Sbjct: 207 INN--IDYYKNTTNGRLPVKWMA------PEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 254 PF 255
P+
Sbjct: 259 PY 260
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E V+ QLD+P +VR+ + S + +E E G L + H+ + +V
Sbjct: 58 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 116
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++Y+ +HRD+ N+LL + KI+DFG K ++ A + K
Sbjct: 117 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--KAQTHGK--- 171
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ PE +N + +D+W+ G +++ S G P++
Sbjct: 172 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 212
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E V+ QLD+P +VR+ + S + +E E G L + H+ + +V
Sbjct: 56 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 114
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++Y+ +HRD+ N+LL + KI+DFG K ++ A + K
Sbjct: 115 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--KAQTHGK--- 169
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ PE +N + +D+W+ G +++ S G P++
Sbjct: 170 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 210
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E V+ QLD+P +VR+ + S + +E E G L + H+ + +V
Sbjct: 76 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 134
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++Y+ +HRD+ N+LL + KI+DFG K ++ A + K
Sbjct: 135 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--KAQTHGK--- 189
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ PE +N + +D+W+ G +++ S G P++
Sbjct: 190 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 230
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 40/247 (16%)
Query: 38 PQEH---FSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMDKKFITKENKT 89
P +H F GK G G++ KVV A K D A+K++ E +
Sbjct: 29 PYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREA 88
Query: 90 AYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--------- 139
+L+ VL L +H +V L + E C G+L + + K
Sbjct: 89 LMSELK--VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 146
Query: 140 ---------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFG 190
L ++ ++ +V + ++ S IHRD+ N+LLT KI DFG
Sbjct: 147 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG 206
Query: 191 SVKPMQ-DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML 249
+ ++ DS V NA K ++ PE + + TF +D+W+ G L+++
Sbjct: 207 LARDIKNDSNYVVKGNARLPVK---------WMAPESIFNCVYTFESDVWSYGIFLWELF 257
Query: 250 S-GTSPF 255
S G+SP+
Sbjct: 258 SLGSSPY 264
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 99/242 (40%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G++ +VV A+ + A+K++ K+
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ +E G L + + ++
Sbjct: 88 VSEMEMMKMIG-KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 207 IN--------NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 254 PF 255
P+
Sbjct: 259 PY 260
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G + +VV A+ + A+K++ K+
Sbjct: 17 PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 76
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ +E G L + + ++
Sbjct: 77 VSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 135
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 136 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 195
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 196 IN--------NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 247
Query: 254 PF 255
P+
Sbjct: 248 PY 249
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 119 SLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLL 177
SL + +E G L D + + L Y++++ +EY+ S +HRD+ N+L
Sbjct: 87 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 146
Query: 178 LTADGHIKIADFGSVK--PMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFG 235
+ ++ H+KIADFG K P+ V S + PE L+ + +
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQS---------PIFWYAPESLSDNIFSRQ 197
Query: 236 NDLWALGCTLYQMLS 250
+D+W+ G LY++ +
Sbjct: 198 SDVWSFGVVLYELFT 212
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E V+ QLD+P +VR+ + S + +E E G L + H+ + +V
Sbjct: 78 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 136
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++Y+ +HRD+ N+LL + KI+DFG K ++ A + K
Sbjct: 137 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--KAQTHGK--- 191
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ PE +N + +D+W+ G +++ S G P++
Sbjct: 192 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E V+ QLD+P +VR+ + S + +E E G L + H+ + +V
Sbjct: 78 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 136
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++Y+ +HRD+ N+LL + KI+DFG K ++ A + K
Sbjct: 137 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--KAQTHGK--- 191
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ PE +N + +D+W+ G +++ S G P++
Sbjct: 192 --WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G + +VV A+ + A+K++ K+
Sbjct: 15 PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 74
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ +E G L + + ++
Sbjct: 75 VSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 133
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 134 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARD 193
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 194 IN--------NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 245
Query: 254 PF 255
P+
Sbjct: 246 PY 247
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 119 SLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLL 177
SL + +E G L D + + L Y++++ +EY+ S +HRD+ N+L
Sbjct: 88 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 147
Query: 178 LTADGHIKIADFGSVK--PMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFG 235
+ ++ H+KIADFG K P+ V S + PE L+ + +
Sbjct: 148 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQS---------PIFWYAPESLSDNIFSRQ 198
Query: 236 NDLWALGCTLYQMLS 250
+D+W+ G LY++ +
Sbjct: 199 SDVWSFGVVLYELFT 213
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 40/247 (16%)
Query: 38 PQEH---FSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMDKKFITKENKT 89
P +H F GK G G++ KVV A K D A+K++ E +
Sbjct: 31 PYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREA 90
Query: 90 AYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--------- 139
+L+ VL L +H +V L + E C G+L + + K
Sbjct: 91 LMSELK--VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 148
Query: 140 ---------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFG 190
L ++ ++ +V + ++ S IHRD+ N+LLT KI DFG
Sbjct: 149 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG 208
Query: 191 SVKPMQ-DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML 249
+ ++ DS V NA K ++ PE + + TF +D+W+ G L+++
Sbjct: 209 LARDIKNDSNYVVKGNARLPVK---------WMAPESIFNCVYTFESDVWSYGIFLWELF 259
Query: 250 S-GTSPF 255
S G+SP+
Sbjct: 260 SLGSSPY 266
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 40/247 (16%)
Query: 38 PQEH---FSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMDKKFITKENKT 89
P +H F GK G G++ KVV A K D A+K++ E +
Sbjct: 36 PYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREA 95
Query: 90 AYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--------- 139
+L+ VL L +H +V L + E C G+L + + K
Sbjct: 96 LMSELK--VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 140 ---------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFG 190
L ++ ++ +V + ++ S IHRD+ N+LLT KI DFG
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG 213
Query: 191 SVKPMQ-DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML 249
+ ++ DS V NA K ++ PE + + TF +D+W+ G L+++
Sbjct: 214 LARHIKNDSNYVVKGNARLPVK---------WMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 250 S-GTSPF 255
S G+SP+
Sbjct: 265 SLGSSPY 271
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G + +VV A+ + A+K++ K+
Sbjct: 20 PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 79
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ +E G L + + ++
Sbjct: 80 VSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 138
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 139 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 198
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 199 IN--------NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 250
Query: 254 PF 255
P+
Sbjct: 251 PY 252
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 119 SLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLL 177
SL + +E G L D + + L Y++++ +EY+ S +HRD+ N+L
Sbjct: 100 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 159
Query: 178 LTADGHIKIADFGSVK--PMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFG 235
+ ++ H+KIADFG K P+ V S + PE L+ + +
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQS---------PIFWYAPESLSDNIFSRQ 210
Query: 236 NDLWALGCTLYQMLS 250
+D+W+ G LY++ +
Sbjct: 211 SDVWSFGVVLYELFT 225
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 40/247 (16%)
Query: 38 PQEH---FSIQDFELGKIYGVGSYSKVVRAK-----KIDTGTVYALKIMDKKFITKENKT 89
P +H F GK G G++ KVV A K D A+K++ E +
Sbjct: 36 PYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREA 95
Query: 90 AYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--------- 139
+L+ VL L +H +V L + E C G+L + + K
Sbjct: 96 LMSELK--VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 140 ---------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFG 190
L ++ ++ +V + ++ S IHRD+ N+LLT KI DFG
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFG 213
Query: 191 SVKPMQ-DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML 249
+ ++ DS V NA K ++ PE + + TF +D+W+ G L+++
Sbjct: 214 LARDIKNDSNYVVKGNARLPVK---------WMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 250 S-GTSPF 255
S G+SP+
Sbjct: 265 SLGSSPY 271
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 150 YTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209
YT+++ +EY+ + IHRD+ N+L+ + +KI DFG K VLP
Sbjct: 122 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQ---- 169
Query: 210 DKACTFVGTAAYVP-----PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIF 264
DK V P PE L S + +D+W+ G LY++ + K S F
Sbjct: 170 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--KSKSPPAEF 227
Query: 265 QRIIARD 271
R+I D
Sbjct: 228 MRMIGND 234
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 30/252 (11%)
Query: 32 SFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAK----KIDTGTVYALKIMDKKFITKEN 87
+F R P + F + + + G G++ V + + +TG V A+K + T+E+
Sbjct: 1 AFEDRDPTQ-FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEH 57
Query: 88 KTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALESCEGGELFDQITSKGH-LSE 144
+ + E +L L H +V+ +L + +E G L D + + +
Sbjct: 58 LRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDH 116
Query: 145 DEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204
+ YT+++ +EY+ + IHRD+ N+L+ + +KI DFG K VLP
Sbjct: 117 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLP 168
Query: 205 NAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259
DK V P PE L S + +D+W+ G LY++ + K S
Sbjct: 169 Q----DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE--KSKS 222
Query: 260 EWLIFQRIIARD 271
F R+I D
Sbjct: 223 PPAEFMRMIGND 234
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G++ +VV A+ + A+K++ K+
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ +E G L + + ++
Sbjct: 88 VSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + ++IADFG +
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARD 206
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 207 IN--------NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 254 PF 255
P+
Sbjct: 259 PY 260
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 21/213 (9%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLDHPGVV 108
K+ G G++ V + + G + + K A V+ E +++ +DHP +V
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 109 RLF-FTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
RL T L L G L + + K ++ + ++ + Y+ L
Sbjct: 104 RLLGVCLSPTIQLVTQL--MPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 161
Query: 167 IHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG---TAAYVP 223
+HRD+ N+L+ + H+KI DFG + ++ D+K G ++
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLE-----------GDEKEYNADGGKMPIKWMA 210
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
E ++ T +D+W+ G T++++++ G P+
Sbjct: 211 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 243
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 38/203 (18%)
Query: 85 KENKTAYVKLERI-------VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQIT 137
K K Y + +R+ ++ Q H ++RL + + E E G L
Sbjct: 79 KTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL----- 133
Query: 138 SKGHLSEDEARFYTAEVVDAL-------EYIHSMGLIHRDIKPENLLLTADGHIKIADFG 190
L E + F ++V L +Y+ +M +HRD+ N+L+ ++ K++DFG
Sbjct: 134 -DKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFG 192
Query: 191 SVKPMQDSRITVLPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLWALGCTL 245
L DD T+ + +P PE ++ T +D+W+ G +
Sbjct: 193 ------------LSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM 240
Query: 246 YQMLS-GTSPFKDTSEWLIFQRI 267
+++++ G P+ + S + + I
Sbjct: 241 WEVMTYGERPYWELSNHEVMKAI 263
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 49 LGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
LGK G G++ +VV A+ I + T A+K++ K+ ++E + +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------------GHLSED 145
H ++ L LY+ +E G L + + ++ LS
Sbjct: 92 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSK 150
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
+ +V +EY+ S IHRD+ N+L+T D +KIADFG + + +
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--------H 202
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
K ++ PE L T +D+W+ G L+++ + G SP+
Sbjct: 203 IDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E V+ QLD+P +VR+ + S + +E E G L + H+ + +V
Sbjct: 420 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 478
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++Y+ +HRD+ N+LL + KI+DFG K ++ A + K
Sbjct: 479 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--KAQTHGKW-- 534
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ PE +N + +D+W+ G +++ S G P++
Sbjct: 535 ---PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 574
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEV 154
E V+ QLD+P +VR+ + S + +E E G L + H+ + +V
Sbjct: 421 EANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 479
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACT 214
++Y+ +HRD+ N+LL + KI+DFG K ++ A + K
Sbjct: 480 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY--KAQTHGKW-- 535
Query: 215 FVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256
+ PE +N + +D+W+ G +++ S G P++
Sbjct: 536 ---PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 575
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 91/213 (42%), Gaps = 21/213 (9%)
Query: 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLDHPGVV 108
K+ G G++ V + + G + + K A V+ E +++ +DHP +V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 109 RLF-FTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAEVVDALEYIHSMGL 166
RL T L L G L + + K ++ + ++ + Y+ L
Sbjct: 81 RLLGVCLSPTIQLVTQL--MPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 138
Query: 167 IHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTA---AYVP 223
+HRD+ N+L+ + H+KI DFG + ++ D+K G ++
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLE-----------GDEKEYNADGGKMPIKWMA 187
Query: 224 PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
E ++ T +D+W+ G T++++++ G P+
Sbjct: 188 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 220
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 68 DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALE 125
+TG V A+K + T+E+ + + E +L L H +V+ +L + +E
Sbjct: 37 NTGEVVAVKKLQHS--TEEHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93
Query: 126 SCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184
G L D + K + + YT+++ +EY+ + IHRD+ N+L+ + +
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRV 153
Query: 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLW 239
KI DFG K VLP DK V P PE L S + +D+W
Sbjct: 154 KIGDFGLTK--------VLPQ----DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVW 201
Query: 240 ALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271
+ G LY++ + K S F R+I D
Sbjct: 202 SFGVVLYELFTYIE--KSKSPPAEFMRMIGND 231
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 120 LYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLL 178
L + +E G L D + + L Y++++ +EY+ S +HRD+ N+L+
Sbjct: 85 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 144
Query: 179 TADGHIKIADFGSVKPM---QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFG 235
++ H+KIADFG K + +D + P + + PE L+ + +
Sbjct: 145 ESEAHVKIADFGLAKLLPLDKDXXVVREPGQS----------PIFWYAPESLSDNIFSRQ 194
Query: 236 NDLWALGCTLYQMLS 250
+D+W+ G LY++ +
Sbjct: 195 SDVWSFGVVLYELFT 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 69 TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--FSLYMALES 126
TG + A+K + K ++++ + K E +L L H +++ +D SL + +E
Sbjct: 42 TGEMVAVKAL-KADCGPQHRSGW-KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEY 99
Query: 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
G L D + + + + + ++ + + Y+H+ IHR++ N+LL D +KI
Sbjct: 100 VPLGSLRDYL-PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKI 158
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246
DFG K + + D + F + PE L + +D+W+ G TLY
Sbjct: 159 GDFGLAKAVPEGHEYY--RVREDGDSPVF-----WYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 247 QMLS 250
++L+
Sbjct: 212 ELLT 215
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 47 FELGKIYGVG--SYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+EL + G G V A+ TG ++ ++ + + E T +++ E V +H
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVT-FLQGELHVSKLFNH 85
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIH 162
P +V TF L++ G D I + ++E + V+ AL+YIH
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPM----QDSRITVLPNAASDDKACTFVGT 218
MG +HR +K ++L++ DG + ++ S M Q R+ D V
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV-------HDFPKYSVKV 198
Query: 219 AAYVPPEVLNSSPATFG--NDLWALGCTLYQMLSGTSPFKD 257
++ PEVL + + +D++++G T ++ +G PFKD
Sbjct: 199 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 47 FELGKIYGVG--SYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH 104
+EL + G G V A+ TG ++ ++ + + E T +++ E V +H
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVT-FLQGELHVSKLFNH 69
Query: 105 PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIH 162
P +V TF L++ G D I + ++E + V+ AL+YIH
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 163 SMGLIHRDIKPENLLLTADGHIKIADFGSVKPM----QDSRITVLPNAASDDKACTFVGT 218
MG +HR +K ++L++ DG + ++ S M Q R+ D V
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVV-------HDFPKYSVKV 182
Query: 219 AAYVPPEVLNSSPATFG--NDLWALGCTLYQMLSGTSPFKD 257
++ PEVL + + +D++++G T ++ +G PFKD
Sbjct: 183 LPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 223
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 29/228 (12%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLER--IVLDQ 101
+ E K G G + V + + + +V A+K I+ E + + +R ++
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARF-YTAEVVDALEY 160
L+HP +V+L+ + + M C G+L+ ++ K H + + ++ +EY
Sbjct: 80 LNHPNIVKLYGLMHNPPRMVMEFVPC--GDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 161 IHSMG--LIHRDIKPENLLL-----TADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ + ++HRD++ N+ L A K+ADFG+ + S
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGT-------------SQQSVHSVS 184
Query: 214 TFVGTAAYVPPEVLNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTS 259
+G ++ PE + + ++ D ++ LY +L+G PF + S
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L M L G L D + K ++ + ++ + Y+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYHAEGGKVP 184
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD----QLDHPG--- 106
G G +S V AK + T A+KI+ + E +KL + V D + D G
Sbjct: 28 GWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANH 87
Query: 107 VVRLFFTFQ----DTFSLYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEY 160
+++L F + + M E G L I H + + + +++ L+Y
Sbjct: 88 ILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDY 146
Query: 161 IHSM-GLIHRDIKPENLLL-TADG-----HIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+H G+IH DIKPEN+L+ D IKIAD G+ D+
Sbjct: 147 MHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-------------CWYDEHYT 193
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK 256
+ T Y PEVL +P G D+W+ C ++++++G F+
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L M L G L D + K ++ + ++ + Y+
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPF--GXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 135 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 183
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L M L G L D + K ++ + ++ + Y+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYHAEGGKVP 184
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD----QLDHPG--- 106
G G +S V AK + T A+KI+ + E +KL + V D + D G
Sbjct: 28 GWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANH 87
Query: 107 VVRLFFTFQ----DTFSLYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEY 160
+++L F + + M E G L I H + + + +++ L+Y
Sbjct: 88 ILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDY 146
Query: 161 IHSM-GLIHRDIKPENLLL-TADG-----HIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+H G+IH DIKPEN+L+ D IKIAD G+ D+
Sbjct: 147 MHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-------------CWYDEHYT 193
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK 256
+ T Y PEVL +P G D+W+ C ++++++G F+
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L M L G L D + K ++ + ++ + Y+
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 138 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYHAEGGKVP 186
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 40/248 (16%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTG-----TVYALKIMDKKFITKENKTAYV 92
P+ F ++ LGK G G + KVV+A T A+K++ + E +
Sbjct: 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS 75
Query: 93 KLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSK---GHLSE--- 144
+ VL Q++HP V++L+ L + +E + G L F + + K G+L
Sbjct: 76 EFN--VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 145 ---------DEARF-------YTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIAD 188
DE + ++ ++Y+ M L+HRD+ N+L+ +KI+D
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISD 193
Query: 189 FGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQM 248
FG + + + V K ++ E L T +D+W+ G L+++
Sbjct: 194 FGLSRDVYEEDSXV--------KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 249 LS-GTSPF 255
++ G +P+
Sbjct: 246 VTLGGNPY 253
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 99/247 (40%), Gaps = 37/247 (14%)
Query: 45 QDFELGKIYGVGSYSKVVRAK-KIDTGTVY--ALKIMDKKFITKENKTAYVKLERIVLDQ 101
Q F LG++ G G + V A+ K + G+ A+K++ I + +++ E + +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR-EAACMKE 81
Query: 102 LDHPGVVRL------------------FFTFQDTFSLYMALESCEGGELFDQITSKGHLS 143
DHP V +L F L+ L + GE + +L
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGE------NPFNLP 135
Query: 144 EDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203
+ ++ +EY+ S IHRD+ N +L D + +ADFG + +
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY-- 193
Query: 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWL 262
+ C ++ E L + T +D+WA G T++++++ G +P+
Sbjct: 194 ------RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE 247
Query: 263 IFQRIIA 269
I+ +I
Sbjct: 248 IYNYLIG 254
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 49 LGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
LGK G G++ +VV A+ I + T A+K++ K+ ++E + +
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------------GHLSED 145
H ++ L LY+ +E G L + + ++ LS
Sbjct: 77 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 135
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
+ +V +EY+ S IHRD+ N+L+T D +KIADFG + + +
Sbjct: 136 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--------H 187
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
K ++ PE L T +D+W+ G L+++ + G SP+
Sbjct: 188 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 25/212 (11%)
Query: 68 DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL--FFTFQDTFSLYMALE 125
+TG V A+K + T+E+ + + E +L L H +V+ +L + +E
Sbjct: 38 NTGEVVAVKKLQHS--TEEHLRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 94
Query: 126 SCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184
G L D + K + + YT+++ +EY+ + IHR++ N+L+ + +
Sbjct: 95 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRV 154
Query: 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVP-----PEVLNSSPATFGNDLW 239
KI DFG K VLP DK V P PE L S + +D+W
Sbjct: 155 KIGDFGLTK--------VLPQ----DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 202
Query: 240 ALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271
+ G LY++ + K S F R+I D
Sbjct: 203 SFGVVLYELFTYIE--KSKSPPAEFMRMIGND 232
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 49 LGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
LGK G G++ +VV A+ I + T A+K++ K+ ++E + +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------------GHLSED 145
H ++ L LY+ +E G L + + ++ LS
Sbjct: 92 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
+ +V +EY+ S IHRD+ N+L+T D +KIADFG + + +
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--------H 202
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
K ++ PE L T +D+W+ G L+++ + G SP+
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 49 LGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
LGK G G++ +VV A+ I + T A+K++ K+ ++E + +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKG----------------HLSED 145
H ++ L LY+ +E G L + + ++ LS
Sbjct: 92 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
+ +V +EY+ S IHRD+ N+L+T D +KIADFG + + +
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--------H 202
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
K ++ PE L T +D+W+ G L+++ + G SP+
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G++ +VV A+ + A+K++ K+
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ + G L + + ++
Sbjct: 88 VSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDI 146
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 207 IN--------NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 254 PF 255
P+
Sbjct: 259 PY 260
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRI 200
L++ + R+Y E++ AL+Y HS G++HRD+KP N+++ + +++ D+G + +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK- 180
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC M+ PF
Sbjct: 181 ----------EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 49 LGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
LGK G G++ +VV A+ I + T A+K++ K+ ++E + +
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------------GHLSED 145
H ++ L LY+ +E G L + + ++ LS
Sbjct: 84 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
+ +V +EY+ S IHRD+ N+L+T D +KIADFG + + +
Sbjct: 143 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--------H 194
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
K ++ PE L T +D+W+ G L+++ + G SP+
Sbjct: 195 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRI 200
L++ + R+Y E++ AL+Y HS G++HRD+KP N+++ + +++ D+G + +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK- 180
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC M+ PF
Sbjct: 181 ----------EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRI 200
L++ + R+Y E++ AL+Y HS G++HRD+KP N+++ + +++ D+G + +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK- 180
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC M+ PF
Sbjct: 181 ----------EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 49 LGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
LGK G G++ +VV A+ I + T A+K++ K+ ++E + +
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------------GHLSED 145
H ++ L LY+ +E G L + + ++ LS
Sbjct: 85 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
+ +V +EY+ S IHRD+ N+L+T D +KIADFG + + +
Sbjct: 144 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--------H 195
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
K ++ PE L T +D+W+ G L+++ + G SP+
Sbjct: 196 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRI 200
L++ + R+Y E++ AL+Y HS G++HRD+KP N+++ + +++ D+G + +
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK- 181
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC M+ PF
Sbjct: 182 ----------EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRI 200
L++ + R+Y E++ AL+Y HS G++HRD+KP N+++ + +++ D+G + +
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK- 181
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC M+ PF
Sbjct: 182 ----------EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 49 LGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
LGK G G++ +VV A+ I + T A+K++ K+ ++E + +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------------GHLSED 145
H ++ L LY+ +E G L + + ++ LS
Sbjct: 92 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSK 150
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
+ +V +EY+ S IHRD+ N+L+T D +KIADFG + + +
Sbjct: 151 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--------H 202
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
K ++ PE L T +D+W+ G L+++ + G SP+
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRI 200
L++ + R+Y E++ AL+Y HS G++HRD+KP N+++ + +++ D+G + +
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK- 182
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC M+ PF
Sbjct: 183 ----------EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 49 LGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
LGK G G++ +VV A+ I + T A+K++ K+ ++E + +
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------------GHLSED 145
H ++ L LY+ +E G L + + ++ LS
Sbjct: 81 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
+ +V +EY+ S IHRD+ N+L+T D +KIADFG + + +
Sbjct: 140 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--------H 191
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
K ++ PE L T +D+W+ G L+++ + G SP+
Sbjct: 192 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRI 200
L++ + R+Y E++ AL+Y HS G++HRD+KP N+++ + +++ D+G + +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK- 180
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC M+ PF
Sbjct: 181 ----------EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRI 200
L++ + R+Y E++ AL+Y HS G++HRD+KP N+++ + +++ D+G + +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK- 180
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC M+ PF
Sbjct: 181 ----------EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 33/231 (14%)
Query: 49 LGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
LGK G G++ +VV A+ I + T A+K++ K+ ++E + +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------------GHLSED 145
H ++ L LY+ +E G L + + ++ LS
Sbjct: 133 -KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 146 EARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205
+ +V +EY+ S IHRD+ N+L+T D +KIADFG + + +
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--------H 243
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
K ++ PE L T +D+W+ G L+++ + G SP+
Sbjct: 244 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++Y+ S
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL------ 205
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 260
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRI 200
L++ + R+Y E++ AL+Y HS G++HRD+KP N+++ + +++ D+G + +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK- 180
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC M+ PF
Sbjct: 181 ----------EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVY-ALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
+E+ G G++ KVV G + A+KI+ +N Y + R + L+H
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV-------KNVDRYCEAARSEIQVLEHL 68
Query: 106 G---------VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHL--SEDEARFYTAEV 154
V++ F+ + + E G +D I G L D R ++
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQI 127
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN--------- 205
++ ++HS L H D+KPEN+L + + + K +D R + P+
Sbjct: 128 CKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN---PKIKRDERTLINPDIKVVDFGSA 184
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTS--PFKDTSEWL- 262
D+ T V T Y PEV+ + + D+W++GC L + G + P D+ E L
Sbjct: 185 TYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 263 IFQRIIA 269
+ +RI+
Sbjct: 245 MMERILG 251
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L M L G L D + K ++ + ++ + Y+
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 138 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 186
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRI 200
L++ + R+Y E++ AL+Y HS G++HRD+KP N+++ + +++ D+G + +
Sbjct: 143 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK- 201
Query: 201 TVLPNAASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPF 255
+ V + + PE+L + + D+W+LGC M+ PF
Sbjct: 202 ----------EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 40/248 (16%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTG-----TVYALKIMDKKFITKENKTAYV 92
P+ F ++ LGK G G + KVV+A T A+K++ + E +
Sbjct: 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS 75
Query: 93 KLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSK---GHLSE--- 144
+ VL Q++HP V++L+ L + +E + G L F + + K G+L
Sbjct: 76 EFN--VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 145 ---------DEARF-------YTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIAD 188
DE + ++ ++Y+ M L+HRD+ N+L+ +KI+D
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 189 FGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQM 248
FG + + + V K ++ E L T +D+W+ G L+++
Sbjct: 194 FGLSRDVYEEDSXV--------KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 249 LS-GTSPF 255
++ G +P+
Sbjct: 246 VTLGGNPY 253
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L M L G L D + K ++ + ++ + Y+
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 185
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++Y+ S
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 144
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL------ 198
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 253
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L M L G L D + K ++ + ++ + Y+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 184
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++Y+ S
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL------ 201
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 256
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++Y+ S
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL------ 225
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 280
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L M L G L D + K ++ + ++ + Y+
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 135 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 183
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L M L G L D + K ++ + ++ + Y+
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 182
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++Y+ S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL------ 206
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 261
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++Y+ S
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 150
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL------ 204
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 259
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++Y+ S
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 149
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL------ 203
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 258
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++Y+ S
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL------ 224
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 279
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 98/242 (40%), Gaps = 33/242 (13%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTA 90
P+ F LGK G G++ +VV A+ + A+K++ K+
Sbjct: 28 PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL 87
Query: 91 YVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK----------- 139
++E + + H ++ L LY+ + G L + + ++
Sbjct: 88 VSEMEMMKMIG-KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDI 146
Query: 140 GHLSEDEARFY-----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ E++ F T ++ +EY+ S IHRD+ N+L+T + +KIADFG +
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
+ N K ++ PE L T +D+W+ G ++++ + G S
Sbjct: 207 IN--------NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 254 PF 255
P+
Sbjct: 259 PY 260
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++Y+ S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 152
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL------ 206
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 261
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++Y+ S
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 151
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL------ 205
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 260
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 40/248 (16%)
Query: 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTG-----TVYALKIMDKKFITKENKTAYV 92
P+ F ++ LGK G G + KVV+A T A+K++ + E +
Sbjct: 16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS 75
Query: 93 KLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL--FDQITSK---GHLSE--- 144
+ VL Q++HP V++L+ L + +E + G L F + + K G+L
Sbjct: 76 EFN--VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133
Query: 145 ---------DEARF-------YTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIAD 188
DE + ++ ++Y+ M L+HRD+ N+L+ +KI+D
Sbjct: 134 RNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 189 FGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQM 248
FG + + + V K ++ E L T +D+W+ G L+++
Sbjct: 194 FGLSRDVYEEDSYV--------KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 249 LS-GTSPF 255
++ G +P+
Sbjct: 246 VTLGGNPY 253
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 96/228 (42%), Gaps = 29/228 (12%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALK--IMDKKFITKENKTAYVKLER--IVLDQ 101
+ E K G G + V + + + +V A+K I+ E + + +R ++
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 102 LDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARF-YTAEVVDALEY 160
L+HP +V+L+ + + M C G+L+ ++ K H + + ++ +EY
Sbjct: 80 LNHPNIVKLYGLMHNPPRMVMEFVPC--GDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 161 IHSMG--LIHRDIKPENLLL-----TADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
+ + ++HRD++ N+ L A K+ADFG + S
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-------------SQQSVHSVS 184
Query: 214 TFVGTAAYVPPEVLNSSPATFGN--DLWALGCTLYQMLSGTSPFKDTS 259
+G ++ PE + + ++ D ++ LY +L+G PF + S
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTAD----GHIKIADFGSVKPMQDSRITVLPNAAS 208
+++D + Y+H+ ++HRD+KP N+L+ + G +KIAD G + + P A
Sbjct: 136 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP---LKPLADL 192
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260
D TF A P +L + T D+WA+GC ++L+ F E
Sbjct: 193 DPVVVTFWYRA---PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFY---- 150
E ++ +L H +V+L+ + +Y+ E G L D L + E R
Sbjct: 54 EAQIMKKLKHDKLVQLYAVVSEE-PIYIVTEYMNKGSLLD------FLKDGEGRALKLPN 106
Query: 151 ----TAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNA 206
A+V + YI M IHRD++ N+L+ KIADFG + ++D+ T A
Sbjct: 107 LVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGA 166
Query: 207 ASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQ 265
K + PE T +D+W+ G L ++++ G P+ + + +
Sbjct: 167 KFPIK---------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLE 217
Query: 266 RIIARDIRFP 275
+ + R R P
Sbjct: 218 Q-VERGYRMP 226
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 27/242 (11%)
Query: 21 STNCPT----VQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALK 76
+T CPT Q A+ P+E + + +LG+ G + +V T V A+K
Sbjct: 161 TTVCPTSKPQTQGLAKDAWEIPRESLRL-EVKLGQ----GCFGEVWMGTWNGTTRV-AIK 214
Query: 77 IMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI 136
+ ++ E A+++ E V+ +L H +V+L+ + +Y+ E G L D +
Sbjct: 215 TLKPGTMSPE---AFLQ-EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 269
Query: 137 TSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ +L + A++ + Y+ M +HRD++ N+L+ + K+ADFG +
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 329
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
++D+ T A K + PE T +D+W+ G L ++ + G
Sbjct: 330 IEDNEYTARQGAKFPIK---------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 254 PF 255
P+
Sbjct: 381 PY 382
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 27/242 (11%)
Query: 21 STNCPT----VQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALK 76
+T CPT Q A+ P+E + + +LG+ G + +V T V A+K
Sbjct: 161 TTVCPTSKPQTQGLAKDAWEIPRESLRL-EVKLGQ----GCFGEVWMGTWNGTTRV-AIK 214
Query: 77 IMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI 136
+ ++ E A+++ E V+ +L H +V+L+ + +Y+ E G L D +
Sbjct: 215 TLKPGTMSPE---AFLQ-EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 269
Query: 137 TSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ +L + A++ + Y+ M +HRD++ N+L+ + K+ADFG +
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 329
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
++D+ T A K + PE T +D+W+ G L ++ + G
Sbjct: 330 IEDNEYTARQGAKFPIK---------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 254 PF 255
P+
Sbjct: 381 PY 382
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E V+ +L H +V+L+ + +Y+ +E G L D + + +L + A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + Y+ M +HRD++ N+L+ + K+ADFG + ++D+ T A K
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK- 180
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE T +D+W+ G L ++ + G P+
Sbjct: 181 --------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E V+ +L H +V+L+ + +Y+ +E G L D + + +L + A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + Y+ M +HRD++ N+L+ + K+ADFG + ++D+ T A K
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE T +D+W+ G L ++ + G P+
Sbjct: 181 --------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++++ S
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL------ 265
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 320
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++++ S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL------ 206
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 261
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAE 153
E ++ Q DHP ++RL + E E G L + T G + +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
V + Y+ +G +HRD+ N+L+ ++ K++DFG + ++D P+AA
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD-----PDAA------ 208
Query: 214 TFVGTAAYVP-----PEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ T +P PE + + +D+W+ G ++++L+ G P+
Sbjct: 209 -YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++++ S
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL------ 211
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 266
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 113/262 (43%), Gaps = 28/262 (10%)
Query: 21 STNCPT----VQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALK 76
+T CPT Q A+ P+E + + +LG+ G + +V T V A+K
Sbjct: 244 TTVCPTSKPQTQGLAKDAWEIPRESLRL-EVKLGQ----GCFGEVWMGTWNGTTRV-AIK 297
Query: 77 IMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI 136
+ ++ E A+++ E V+ +L H +V+L+ + +Y+ E G L D +
Sbjct: 298 TLKPGTMSPE---AFLQ-EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 352
Query: 137 TSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ +L + A++ + Y+ M +HRD++ N+L+ + K+ADFG +
Sbjct: 353 KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 412
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
++D+ T A K + PE T +D+W+ G L ++ + G
Sbjct: 413 IEDNEYTARQGAKFPIK---------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 463
Query: 254 PFKDTSEWLIFQRIIARDIRFP 275
P+ + + + R R P
Sbjct: 464 PYPGMVNREVLDQ-VERGYRMP 484
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++++ S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL------ 206
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 261
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 29/246 (11%)
Query: 45 QDFELGKIYGVGSYSKVVRAKKIDT---GTVYALKIMDKKFITKENKTAYVKLERIVLDQ 101
+ +E+ G G++ +VV+ +D G ALKI+ K + K + A +LE VL++
Sbjct: 33 ERYEIVSTLGEGTFGRVVQC--VDHRRGGARVALKII--KNVEKYKEAA--RLEINVLEK 86
Query: 102 LDHPG------VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSE--DEARFYTAE 153
++ V++F F + ++ E G FD + +L + R +
Sbjct: 87 INEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQ 145
Query: 154 VVDALEYIHSMGLIHRDIKPENLL-LTADGHI-----KIADFGSVKPMQDSRITVLPNAA 207
+ A++++H L H D+KPEN+L + +D + K D SVK R+ +A
Sbjct: 146 LCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTA-VRVVDFGSAT 204
Query: 208 SD-DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK--DTSEWL-I 263
D + T V T Y PEV+ + D+W++GC +++ G + F+ D E L +
Sbjct: 205 FDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 264
Query: 264 FQRIIA 269
+RI+
Sbjct: 265 MERILG 270
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++++ S
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 150
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL------ 204
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 259
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++++ S
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL------ 207
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 262
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E V+ +L H +V+L+ + +Y+ E G L D + + +L + +A
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + Y+ M +HRD++ N+L+ + K+ADFG + ++D+ T A K
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 177
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE T +D+W+ G L ++ + G P+
Sbjct: 178 --------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 11/235 (4%)
Query: 48 ELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
++ G G + V +D G + IT + + E I++ HP
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHSM 164
V+ L + S + L + G+L + I ++ H + + + +V ++++ S
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 153
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
+HRD+ N +L +K+ADFG + M D + N ++
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL------ 207
Query: 225 EVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRII-ARDIRFPNY 277
E L + T +D+W+ G L+++++ G P+ D + + I ++ R + P Y
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E V+ +L H +V+L+ + +Y+ E G L D + + +L + +A
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + Y+ M +HRD++ N+L+ + K+ADFG + ++D+ T A K
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK- 177
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE T +D+W+ G L ++ + G P+
Sbjct: 178 --------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYAL--KIMDKKFITKENKTAYVKLERIVLDQLD 103
+F+ K+ G G++ V + I G + IM+ + T + E V+ +D
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 167
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 168 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 216
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAE 153
E ++ Q DHP ++RL + E E G L + T G + +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRG 159
Query: 154 VVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKAC 213
V + Y+ +G +HRD+ N+L+ ++ K++DFG + ++D P+AA
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD-----PDAAXTTTGG 214
Query: 214 TFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE + + +D+W+ G ++++L+ G P+
Sbjct: 215 KI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 27/242 (11%)
Query: 21 STNCPT----VQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALK 76
+T CPT Q A+ P+E + + +LG+ G + +V T V A+K
Sbjct: 161 TTVCPTSKPQTQGLAKDAWEIPRESLRL-EVKLGQ----GCFGEVWMGTWNGTTRV-AIK 214
Query: 77 IMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI 136
+ ++ E A+++ E V+ +L H +V+L+ + +Y+ E G L D +
Sbjct: 215 TLKPGTMSPE---AFLQ-EAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMSKGSLLDFL 269
Query: 137 TSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ +L + A++ + Y+ M +HRD++ N+L+ + K+ADFG +
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 329
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
++D+ T A K + PE T +D+W+ G L ++ + G
Sbjct: 330 IEDNEYTARQGAKFPIK---------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 254 PF 255
P+
Sbjct: 381 PY 382
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 149 FYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
+ ++ + + Y+H+ IHR + N+LL D +KI DFG K + +
Sbjct: 115 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 174
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML----SGTSPFKDTSE 260
D + PE L + +D+W+ G TLY++L S SP +E
Sbjct: 175 D-------SPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTE 223
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 149 FYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208
+ ++ + + Y+H+ IHR + N+LL D +KI DFG K + +
Sbjct: 116 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 175
Query: 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML----SGTSPFKDTSE 260
D + PE L + +D+W+ G TLY++L S SP +E
Sbjct: 176 DS-------PVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTE 224
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYHAEGGKVP 184
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYHAEGGKVP 189
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E V+ +L H +V+L+ + +Y+ +E G L D + + +L + A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + Y+ M +HRD++ N+L+ + K+ADFG + ++D+ T A K
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE T +D+W+ G L ++ + G P+
Sbjct: 181 --------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E V+ +L H +V+L+ + +Y+ E G L D + + +L + A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + Y+ M +HRD++ N+L+ + K+ADFG + ++D+ T A K
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE T +D+W+ G L ++ + G P+
Sbjct: 181 --------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL-----------GAEEKEYHAEGGKVP 182
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPF--GXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 182
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E V+ +L H +V+L+ + +Y+ E G L D + + +L + A
Sbjct: 54 EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 112
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + Y+ M +HRD++ N+L+ + K+ADFG + ++D+ T A K
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 171
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE T +D+W+ G L ++ + G P+
Sbjct: 172 --------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 207
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 23/242 (9%)
Query: 17 NNNSSTNCPTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALK 76
N T+ P Q A+ P+E + + +LG+ G + +V T V A+K
Sbjct: 162 TNVCPTSKPQTQGLAKDAWEIPRESLRL-EVKLGQ----GCFGEVWMGTWNGTTRV-AIK 215
Query: 77 IMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI 136
+ ++ E A+++ E V+ +L H +V+L+ + +Y+ E G L D +
Sbjct: 216 TLKPGNMSPE---AFLQ-EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 270
Query: 137 TSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194
+ +L + A++ + Y+ M +HRD++ N+L+ + K+ADFG +
Sbjct: 271 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRL 330
Query: 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTS 253
++D+ T A K + PE T +D+W+ G L ++ + G
Sbjct: 331 IEDNEYTARQGAKFPIK---------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 381
Query: 254 PF 255
P+
Sbjct: 382 PY 383
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 40/249 (16%)
Query: 34 AFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVK 93
A+ P+E ++ K G G + +V A + T A+K M ++ E A
Sbjct: 176 AWEIPRESLKLE-----KKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSMSVEAFLA--- 226
Query: 94 LERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARF--YT 151
E V+ L H +V+L +Y+ E G L D + S + + ++
Sbjct: 227 -EANVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 284
Query: 152 AEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDK 211
A++ + + +I IHRD++ N+L++A KIADFG +
Sbjct: 285 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR------------------ 326
Query: 212 ACTFVGTA---AYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRI 267
VG + PE +N T +D+W+ G L ++++ G P+ S + R
Sbjct: 327 ----VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RA 381
Query: 268 IARDIRFPN 276
+ R R P
Sbjct: 382 LERGYRMPR 390
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E V+ +L H +V+L+ + +Y+ E G L D + + +L + A
Sbjct: 56 EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 114
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + Y+ M +HRD++ N+L+ + K+ADFG + ++D+ T A K
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 173
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE T +D+W+ G L ++ + G P+
Sbjct: 174 --------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 209
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + + Y+
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYL 130
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 131 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 179
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E V+ +L H +V+L+ + +Y+ E G L D + + +L + A
Sbjct: 52 EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 110
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + Y+ M +HRD++ N+L+ + K+ADFG + ++D+ T A K
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 169
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE T +D+W+ G L ++ + G P+
Sbjct: 170 --------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 205
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 95 ERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTA 152
E V+ +L H +V+L+ + +Y+ E G L D + + +L + A
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 153 EVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212
++ + Y+ M +HRD++ N+L+ + K+ADFG + ++D+ T A K
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
+ PE T +D+W+ G L ++ + G P+
Sbjct: 181 --------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 32/129 (24%)
Query: 147 ARFYTAEVVDALEYIHSMGLIHRDIKPENLLL-------------------TADGHIKIA 187
R ++ AL ++H L H D+KPEN+L + I++A
Sbjct: 134 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 188 DFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQ 247
DFGS + T+ V T Y PPEV+ D+W++GC L++
Sbjct: 194 DFGSATFDHEHHTTI-------------VATRHYRPPEVILELGWAQPCDVWSIGCILFE 240
Query: 248 MLSGTSPFK 256
G + F+
Sbjct: 241 YYRGFTLFQ 249
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 35/247 (14%)
Query: 47 FELGKIYGVGSYSKVVRAKKIDTGTVY-ALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105
+E+ G G++ KVV G + A+KI+ +N Y + R + L+H
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV-------KNVDRYCEAARSEIQVLEHL 68
Query: 106 G---------VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHL--SEDEARFYTAEV 154
V++ F+ + + E G +D I G L D R ++
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQI 127
Query: 155 VDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN--------- 205
++ ++HS L H D+KPEN+L + + + K +D R + P+
Sbjct: 128 CKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN---PKIKRDERTLINPDIKVVDFGSA 184
Query: 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTS--PFKDTSEWL- 262
D+ T V Y PEV+ + + D+W++GC L + G + P D+ E L
Sbjct: 185 TYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 263 IFQRIIA 269
+ +RI+
Sbjct: 245 MMERILG 251
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 32/129 (24%)
Query: 147 ARFYTAEVVDALEYIHSMGLIHRDIKPENLLL-------------------TADGHIKIA 187
R ++ AL ++H L H D+KPEN+L + I++A
Sbjct: 125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 188 DFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQ 247
DFGS + T+ V T Y PPEV+ D+W++GC L++
Sbjct: 185 DFGSATFDHEHHTTI-------------VATRHYRPPEVILELGWAQPCDVWSIGCILFE 231
Query: 248 MLSGTSPFK 256
G + F+
Sbjct: 232 YYRGFTLFQ 240
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 32/129 (24%)
Query: 147 ARFYTAEVVDALEYIHSMGLIHRDIKPENLLL-------------------TADGHIKIA 187
R ++ AL ++H L H D+KPEN+L + I++A
Sbjct: 157 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 188 DFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQ 247
DFGS + T+ V T Y PPEV+ D+W++GC L++
Sbjct: 217 DFGSATFDHEHHTTI-------------VATRHYRPPEVILELGWAQPCDVWSIGCILFE 263
Query: 248 MLSGTSPFK 256
G + F+
Sbjct: 264 YYRGFTLFQ 272
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L M L G L D + K ++ + ++ + Y+
Sbjct: 83 NPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 189
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 185
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 185
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 28/203 (13%)
Query: 75 LKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL---FFTFQD--TFSLYMALESCE- 128
+ I+ F+ K V E +L+ HP ++ L F F++ LY+ E
Sbjct: 64 VNILSDSFLCKR-----VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT 118
Query: 129 --GGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ DQ + +S +++ ++ L +H G++HRD+ P N+LL + I I
Sbjct: 119 DLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI 175
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPE-VLNSSPATFGNDLWALGCTL 245
DF + +D+ +D +V Y PE V+ T D+W+ GC +
Sbjct: 176 CDFNLAR--EDT---------ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM 224
Query: 246 YQMLSGTSPFKDTSEWLIFQRII 268
+M + + F+ ++ + +I+
Sbjct: 225 AEMFNRKALFRGSTFYNQLNKIV 247
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 29/217 (13%)
Query: 51 KIYGVGSYSKVVRAKKIDTG----TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG 106
K+ G G++ V + I G A+K++ + K NK + E V+ + P
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKE--ILDEAYVMAGVGSPY 80
Query: 107 VVRLF-FTFQDTFSLYMALESCEGGELFDQI-TSKGHLSEDEARFYTAEVVDALEYIHSM 164
V RL T L L G L D + ++G L + + ++ + Y+ +
Sbjct: 81 VSRLLGICLTSTVQLVTQLMPY--GCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 165 GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPP 224
L+HRD+ N+L+ + H+KI DFG + + D + VP
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLL-------------DIDETEYHADGGKVPI 185
Query: 225 -----EVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
E + T +D+W+ G T++++++ G P+
Sbjct: 186 KWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPY 222
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 23/210 (10%)
Query: 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVR 109
G G G + VV ++ TV K+ IT E E V+ + H +V
Sbjct: 36 GNKMGEGGFG-VVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
Query: 110 LFFTFQDTFSLYMALESCEGGELFDQITS-------KGHLSEDEARFYTAE-VVDALEYI 161
L D L + G L D+++ H+ R A+ + + ++
Sbjct: 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM-----RCKIAQGAANGINFL 149
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAY 221
H IHRDIK N+LL KI+DFG + + TV+ + VGT AY
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS--------RIVGTTAY 201
Query: 222 VPPEVLNSSPATFGNDLWALGCTLYQMLSG 251
+ PE L T +D+++ G L ++++G
Sbjct: 202 MAPEALRGE-ITPKSDIYSFGVVLLEIITG 230
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 139
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 140 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 188
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 137 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 185
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 136 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 184
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 182
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 141 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 189
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 28/203 (13%)
Query: 75 LKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRL---FFTFQD--TFSLYMALESCE- 128
+ I+ F+ K V E +L+ HP ++ L F F++ LY+ E
Sbjct: 64 VNILSDSFLCKR-----VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT 118
Query: 129 --GGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186
+ DQ + +S +++ ++ L +H G++HRD+ P N+LL + I I
Sbjct: 119 DLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITI 175
Query: 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPE-VLNSSPATFGNDLWALGCTL 245
DF + +D+ +D +V Y PE V+ T D+W+ GC +
Sbjct: 176 CDFNLAR--EDT---------ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM 224
Query: 246 YQMLSGTSPFKDTSEWLIFQRII 268
+M + + F+ ++ + +I+
Sbjct: 225 AEMFNRKALFRGSTFYNQLNKIV 247
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 143
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 144 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 192
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 97/241 (40%), Gaps = 39/241 (16%)
Query: 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI-- 97
+H +D L + G G++ KV A+ + ++ K + A +R
Sbjct: 10 QHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAE 69
Query: 98 VLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI----------------TSKGH 141
+L L H +V+ + D L M E + G+L + +KG
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 142 LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS--- 198
L + +++ + Y+ S +HRD+ N L+ A+ +KI DFG + + +
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY 189
Query: 199 RI---TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSP 254
R+ T+LP ++PPE + T +D+W+ G L+++ + G P
Sbjct: 190 RVGGHTMLP--------------IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
Query: 255 F 255
+
Sbjct: 236 W 236
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKL--ERIVLDQLD 103
+F+ K+ G G++ V + I G + + K+ + A ++ E V+ +D
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 104 HPGVVRLF-FTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYI 161
+P V RL T L L G L D + K ++ + ++ + Y+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 162 HSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAA- 220
L+HRD+ N+L+ H+KI DFG K + +++K G
Sbjct: 134 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL-----------GAEEKEYHAEGGKVP 182
Query: 221 --YVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255
++ E + T +D+W+ G T++++++ G+ P+
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,429,665
Number of Sequences: 62578
Number of extensions: 419819
Number of successful extensions: 3473
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 857
Number of HSP's gapped (non-prelim): 1130
length of query: 366
length of database: 14,973,337
effective HSP length: 100
effective length of query: 266
effective length of database: 8,715,537
effective search space: 2318332842
effective search space used: 2318332842
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)