Query 017781
Match_columns 366
No_of_seqs 249 out of 2006
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 04:50:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017781.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017781hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 1.7E-80 5.9E-85 602.3 34.9 343 3-352 1-348 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 4.7E-73 1.6E-77 561.1 36.5 351 3-353 26-384 (392)
3 2nli_A Lactate oxidase; flavoe 100.0 2.3E-72 7.8E-77 552.5 36.1 348 2-355 11-363 (368)
4 1gox_A (S)-2-hydroxy-acid oxid 100.0 1.2E-70 4.2E-75 541.3 40.9 365 2-366 2-370 (370)
5 1kbi_A Cytochrome B2, L-LCR; f 100.0 1.2E-68 4.1E-73 545.5 38.1 348 3-356 121-483 (511)
6 1p4c_A L(+)-mandelate dehydrog 100.0 8.2E-68 2.8E-72 522.5 38.9 351 3-356 4-358 (380)
7 3sr7_A Isopentenyl-diphosphate 100.0 3E-44 1E-48 351.0 27.5 270 41-355 54-357 (365)
8 1vcf_A Isopentenyl-diphosphate 100.0 1.1E-42 3.8E-47 337.7 24.4 276 23-350 8-329 (332)
9 3vkj_A Isopentenyl-diphosphate 100.0 1.3E-40 4.5E-45 326.2 26.1 269 41-354 27-344 (368)
10 1p0k_A Isopentenyl-diphosphate 100.0 1.4E-40 4.7E-45 325.0 25.3 271 39-354 21-329 (349)
11 2qr6_A IMP dehydrogenase/GMP r 100.0 2.6E-42 9E-47 342.3 7.9 310 15-353 13-392 (393)
12 1ypf_A GMP reductase; GUAC, pu 100.0 2.2E-36 7.7E-41 293.8 21.2 262 34-354 7-325 (336)
13 2c6q_A GMP reductase 2; TIM ba 100.0 2.6E-35 9.1E-40 287.4 17.0 257 35-350 14-341 (351)
14 3r2g_A Inosine 5'-monophosphat 100.0 3.6E-34 1.2E-38 278.8 21.4 250 41-349 8-317 (361)
15 1eep_A Inosine 5'-monophosphat 100.0 6.8E-31 2.3E-35 261.2 21.3 297 40-352 9-384 (404)
16 3khj_A Inosine-5-monophosphate 99.9 1.2E-24 4.1E-29 212.7 23.2 247 41-349 13-331 (361)
17 2e6f_A Dihydroorotate dehydrog 99.9 2E-24 6.8E-29 207.5 20.9 238 59-350 2-310 (314)
18 1jub_A Dihydroorotate dehydrog 99.9 3.8E-24 1.3E-28 205.2 22.0 237 61-350 2-308 (311)
19 1ea0_A Glutamate synthase [NAD 99.9 2E-24 6.8E-29 237.3 21.9 306 6-352 794-1168(1479)
20 1gte_A Dihydropyrimidine dehyd 99.9 6.1E-24 2.1E-28 233.2 22.5 252 48-348 520-851 (1025)
21 3ffs_A Inosine-5-monophosphate 99.9 1.3E-23 4.5E-28 207.2 22.2 252 42-349 11-370 (400)
22 4fo4_A Inosine 5'-monophosphat 99.9 7.6E-24 2.6E-28 207.0 20.2 252 41-349 14-335 (366)
23 4ef8_A Dihydroorotate dehydrog 99.9 1.7E-23 5.7E-28 203.7 21.3 247 49-350 25-343 (354)
24 1ofd_A Ferredoxin-dependent gl 99.9 3.6E-23 1.2E-27 227.7 24.1 279 39-352 838-1203(1520)
25 4af0_A Inosine-5'-monophosphat 99.9 1.9E-22 6.5E-27 202.3 22.0 137 213-349 309-523 (556)
26 3i65_A Dihydroorotate dehydrog 99.9 3.3E-22 1.1E-26 197.4 21.1 119 225-351 268-412 (415)
27 1vhn_A Putative flavin oxidore 99.9 1.6E-23 5.3E-28 201.9 11.1 239 69-352 2-273 (318)
28 1ep3_A Dihydroorotate dehydrog 99.9 1.1E-22 3.9E-27 194.5 15.5 239 56-350 2-306 (311)
29 3zwt_A Dihydroorotate dehydrog 99.9 2E-21 6.8E-26 190.3 23.0 240 56-350 45-364 (367)
30 3oix_A Putative dihydroorotate 99.9 1.4E-21 4.7E-26 189.7 21.6 238 58-349 35-340 (345)
31 1me8_A Inosine-5'-monophosphat 99.9 1.1E-21 3.7E-26 200.0 20.9 136 213-348 270-471 (503)
32 3usb_A Inosine-5'-monophosphat 99.9 5.4E-21 1.9E-25 195.0 22.7 137 213-349 284-481 (511)
33 1tv5_A Dhodehase, dihydroorota 99.9 6.3E-21 2.2E-25 190.4 22.0 120 224-351 295-440 (443)
34 1f76_A Dihydroorotate dehydrog 99.9 1.1E-20 3.7E-25 183.2 20.8 232 58-310 42-323 (336)
35 4avf_A Inosine-5'-monophosphat 99.9 4.4E-20 1.5E-24 187.4 25.5 137 213-349 257-459 (490)
36 4fxs_A Inosine-5'-monophosphat 99.9 3.3E-20 1.1E-24 188.5 21.9 137 213-349 259-458 (496)
37 3tjx_A Dihydroorotate dehydrog 99.8 5.6E-20 1.9E-24 179.5 20.7 242 55-350 31-343 (354)
38 1vrd_A Inosine-5'-monophosphat 99.8 7.7E-20 2.6E-24 186.0 22.2 138 212-349 264-462 (494)
39 3b0p_A TRNA-dihydrouridine syn 99.8 2E-19 6.7E-24 175.4 21.2 239 70-352 2-281 (350)
40 1jcn_A Inosine monophosphate d 99.8 2.3E-19 7.8E-24 183.4 21.6 138 210-349 280-482 (514)
41 1zfj_A Inosine monophosphate d 99.8 1.7E-19 5.8E-24 183.2 19.3 138 212-349 260-461 (491)
42 2cu0_A Inosine-5'-monophosphat 99.8 4.5E-19 1.6E-23 180.0 18.7 134 214-349 257-453 (486)
43 2gjl_A Hypothetical protein PA 99.7 8.8E-16 3E-20 148.2 22.7 193 64-322 10-218 (328)
44 2z6i_A Trans-2-enoyl-ACP reduc 99.7 5.6E-16 1.9E-20 149.9 19.2 179 70-316 11-202 (332)
45 3bo9_A Putative nitroalkan dio 99.7 1.5E-15 5.1E-20 146.6 22.1 186 68-321 23-221 (326)
46 3bw2_A 2-nitropropane dioxygen 99.7 9E-15 3.1E-19 143.4 21.5 201 71-314 10-246 (369)
47 1z41_A YQJM, probable NADH-dep 99.6 4.6E-14 1.6E-18 136.8 18.6 222 63-310 9-312 (338)
48 2gou_A Oxidoreductase, FMN-bin 99.4 1.2E-12 4E-17 128.2 16.0 218 63-310 9-327 (365)
49 2uva_G Fatty acid synthase bet 99.4 4.8E-13 1.7E-17 153.8 15.1 210 48-318 558-808 (2060)
50 1vyr_A Pentaerythritol tetrani 99.4 6E-12 2.1E-16 123.0 19.6 219 63-310 9-328 (364)
51 2r14_A Morphinone reductase; H 99.4 2.6E-12 9E-17 126.1 16.9 219 62-310 14-333 (377)
52 3gr7_A NADPH dehydrogenase; fl 99.4 5E-12 1.7E-16 122.5 18.2 98 211-310 195-312 (340)
53 2hsa_B 12-oxophytodienoate red 99.3 3.8E-11 1.3E-15 118.8 19.4 148 136-310 171-353 (402)
54 3hgj_A Chromate reductase; TIM 99.3 5.7E-11 2E-15 115.5 19.7 98 211-310 203-323 (349)
55 1icp_A OPR1, 12-oxophytodienoa 99.3 2.5E-11 8.7E-16 119.1 15.0 147 137-310 168-335 (376)
56 3l5a_A NADH/flavin oxidoreduct 99.3 3.1E-11 1.1E-15 120.0 15.5 99 211-310 222-351 (419)
57 3kru_A NADH:flavin oxidoreduct 99.3 1.2E-10 4.3E-15 112.7 17.8 97 211-310 194-312 (343)
58 1ps9_A 2,4-dienoyl-COA reducta 99.3 6.7E-11 2.3E-15 124.2 16.3 223 62-310 8-315 (671)
59 1o94_A Tmadh, trimethylamine d 99.3 3.9E-11 1.3E-15 127.3 14.5 222 63-310 13-326 (729)
60 3k30_A Histamine dehydrogenase 99.2 3.2E-10 1.1E-14 119.5 17.6 223 62-310 17-329 (690)
61 3igs_A N-acetylmannosamine-6-p 99.2 1.3E-09 4.6E-14 99.9 18.4 166 90-310 38-215 (232)
62 1y0e_A Putative N-acetylmannos 99.2 9.4E-10 3.2E-14 99.7 17.1 93 214-309 107-208 (223)
63 3q58_A N-acetylmannosamine-6-p 99.2 6.9E-10 2.3E-14 101.7 16.1 166 90-310 38-215 (229)
64 1mzh_A Deoxyribose-phosphate a 99.1 2.1E-09 7E-14 98.2 15.0 90 213-307 104-206 (225)
65 2uv8_G Fatty acid synthase sub 99.1 7.5E-10 2.6E-14 127.0 14.5 189 63-314 584-811 (2051)
66 3l5l_A Xenobiotic reductase A; 99.0 1.1E-09 3.9E-14 106.8 11.8 97 212-310 210-330 (363)
67 1xm3_A Thiazole biosynthesis p 99.0 5.2E-08 1.8E-12 91.0 20.9 195 62-310 3-212 (264)
68 4ab4_A Xenobiotic reductase B; 98.9 3.9E-09 1.3E-13 102.9 11.3 89 211-310 204-313 (362)
69 1yxy_A Putative N-acetylmannos 98.9 2.8E-08 9.7E-13 90.6 16.4 165 90-310 38-220 (234)
70 3gka_A N-ethylmaleimide reduct 98.9 5E-09 1.7E-13 102.1 11.8 89 211-310 212-321 (361)
71 1rd5_A Tryptophan synthase alp 98.9 3.4E-07 1.2E-11 85.0 21.0 70 262-333 189-259 (262)
72 1wv2_A Thiazole moeity, thiazo 98.8 3.6E-08 1.2E-12 90.6 12.9 195 62-310 10-221 (265)
73 3vnd_A TSA, tryptophan synthas 98.8 1.4E-07 5E-12 88.0 16.8 149 134-313 30-243 (267)
74 3nav_A Tryptophan synthase alp 98.8 1.9E-07 6.4E-12 87.4 16.8 150 133-313 31-245 (271)
75 3zen_D Fatty acid synthase; tr 98.8 8.1E-09 2.8E-13 122.4 9.3 189 64-314 423-655 (3089)
76 3aty_A Tcoye, prostaglandin F2 98.8 5.7E-08 1.9E-12 95.3 13.1 93 211-310 228-341 (379)
77 4adt_A Pyridoxine biosynthetic 98.7 1.1E-08 3.7E-13 97.0 6.4 84 225-311 125-244 (297)
78 1qop_A Tryptophan synthase alp 98.7 4.2E-07 1.4E-11 84.9 16.5 49 263-313 194-242 (268)
79 2zbt_A Pyridoxal biosynthesis 98.7 2.5E-08 8.7E-13 94.4 7.6 81 262-350 195-277 (297)
80 1geq_A Tryptophan synthase alp 98.7 2.7E-07 9.2E-12 84.8 13.5 67 262-331 179-245 (248)
81 3o07_A Pyridoxine biosynthesis 98.6 2.1E-07 7.1E-12 86.2 12.3 48 261-310 185-234 (291)
82 1wa3_A 2-keto-3-deoxy-6-phosph 98.6 6.7E-07 2.3E-11 79.7 15.0 158 132-310 18-183 (205)
83 2nv1_A Pyridoxal biosynthesis 98.6 4E-08 1.4E-12 93.6 7.1 79 261-347 194-274 (305)
84 3oa3_A Aldolase; structural ge 98.6 1.1E-06 3.6E-11 82.5 16.3 168 92-306 78-264 (288)
85 3ngj_A Deoxyribose-phosphate a 98.6 6.4E-07 2.2E-11 82.0 14.0 90 213-307 129-231 (239)
86 3qja_A IGPS, indole-3-glycerol 98.6 3.2E-07 1.1E-11 85.9 12.1 84 224-311 161-248 (272)
87 4a3u_A NCR, NADH\:flavin oxido 98.6 1.3E-06 4.4E-11 85.0 15.7 97 212-311 204-321 (358)
88 3tsm_A IGPS, indole-3-glycerol 98.5 1.3E-06 4.4E-11 81.7 14.7 158 139-311 82-255 (272)
89 2qjg_A Putative aldolase MJ040 98.5 9E-07 3.1E-11 82.4 12.0 179 69-310 31-242 (273)
90 2v82_A 2-dehydro-3-deoxy-6-pho 98.5 1.8E-06 6.2E-11 77.3 13.4 185 131-337 14-206 (212)
91 2w6r_A Imidazole glycerol phos 98.4 2.6E-06 9.1E-11 78.8 14.2 70 239-311 166-235 (266)
92 3r12_A Deoxyribose-phosphate a 98.4 3.8E-06 1.3E-10 77.6 15.0 89 213-306 145-246 (260)
93 2ekc_A AQ_1548, tryptophan syn 98.4 3.7E-06 1.3E-10 78.3 15.1 61 264-327 196-256 (262)
94 3ndo_A Deoxyribose-phosphate a 98.4 4.3E-06 1.5E-10 76.2 14.8 90 213-306 114-220 (231)
95 3tdn_A FLR symmetric alpha-bet 98.4 4.4E-07 1.5E-11 83.4 8.1 69 239-310 166-234 (247)
96 1ub3_A Aldolase protein; schif 98.4 6.5E-06 2.2E-10 74.6 14.7 164 91-304 22-204 (220)
97 2p10_A MLL9387 protein; putati 98.3 5.4E-05 1.9E-09 70.4 19.7 209 71-332 27-279 (286)
98 3ovp_A Ribulose-phosphate 3-ep 98.3 1.5E-05 5.2E-10 72.6 15.8 71 260-338 154-224 (228)
99 2yzr_A Pyridoxal biosynthesis 98.3 3.5E-06 1.2E-10 80.1 11.9 46 264-311 230-277 (330)
100 3f4w_A Putative hexulose 6 pho 98.3 5.1E-06 1.7E-10 74.2 12.2 89 217-310 96-192 (211)
101 1yad_A Regulatory protein TENI 98.3 8.4E-06 2.9E-10 73.5 12.8 92 213-310 100-197 (221)
102 3tjl_A NADPH dehydrogenase; OL 98.2 9.8E-07 3.4E-11 87.0 6.3 98 211-310 219-351 (407)
103 4e38_A Keto-hydroxyglutarate-a 98.2 8.8E-06 3E-10 74.2 12.0 167 126-309 36-206 (232)
104 1vc4_A Indole-3-glycerol phosp 98.2 4.1E-06 1.4E-10 77.6 10.0 75 233-311 161-242 (254)
105 1qo2_A Molecule: N-((5-phospho 98.2 3.5E-06 1.2E-10 77.0 8.4 70 239-311 154-229 (241)
106 2htm_A Thiazole biosynthesis p 98.2 5E-06 1.7E-10 76.7 8.8 93 213-310 113-212 (268)
107 1vzw_A Phosphoribosyl isomeras 98.2 5.8E-06 2E-10 75.6 9.2 67 239-310 156-227 (244)
108 1ka9_F Imidazole glycerol phos 98.2 5.5E-06 1.9E-10 75.9 9.1 70 239-311 162-231 (252)
109 1h5y_A HISF; histidine biosynt 98.2 6.2E-06 2.1E-10 75.0 9.2 69 239-310 164-232 (253)
110 2y88_A Phosphoribosyl isomeras 98.1 3.1E-06 1E-10 77.3 6.8 69 239-310 159-230 (244)
111 1thf_D HISF protein; thermophI 98.1 6.1E-06 2.1E-10 75.7 8.3 69 239-310 161-229 (253)
112 3inp_A D-ribulose-phosphate 3- 98.1 3.6E-05 1.2E-09 70.9 13.3 133 132-309 36-227 (246)
113 3tha_A Tryptophan synthase alp 98.1 1E-05 3.4E-10 74.7 9.4 52 264-318 189-240 (252)
114 1rpx_A Protein (ribulose-phosp 98.1 0.00018 6.2E-09 65.0 17.4 165 90-310 25-212 (230)
115 1xi3_A Thiamine phosphate pyro 98.1 7.5E-05 2.5E-09 66.4 14.6 74 234-310 116-195 (215)
116 4gbu_A NADPH dehydrogenase 1; 98.1 8.3E-05 2.9E-09 73.2 16.0 41 269-311 313-354 (400)
117 1vcv_A Probable deoxyribose-ph 98.1 0.00025 8.6E-09 64.3 17.6 92 213-305 100-220 (226)
118 1jvn_A Glutamine, bifunctional 98.0 9.2E-06 3.1E-10 83.4 8.8 70 239-311 462-532 (555)
119 2yw3_A 4-hydroxy-2-oxoglutarat 98.0 2.9E-05 9.8E-10 69.7 10.9 90 211-310 91-184 (207)
120 1pii_A N-(5'phosphoribosyl)ant 98.0 5.8E-05 2E-09 75.3 13.8 116 217-347 150-269 (452)
121 4a29_A Engineered retro-aldol 98.0 5.8E-05 2E-09 69.4 12.6 50 262-311 190-239 (258)
122 2tps_A Protein (thiamin phosph 98.0 2.9E-05 9.8E-10 69.9 10.4 91 217-310 107-205 (227)
123 1i4n_A Indole-3-glycerol phosp 98.0 0.0001 3.4E-09 68.1 14.1 89 217-311 143-236 (251)
124 2fli_A Ribulose-phosphate 3-ep 98.0 0.00013 4.3E-09 65.4 14.6 92 216-310 101-203 (220)
125 3tdn_A FLR symmetric alpha-bet 98.0 1.1E-05 3.9E-10 73.9 7.7 69 239-310 45-113 (247)
126 1n7k_A Deoxyribose-phosphate a 98.0 8.3E-05 2.8E-09 67.9 12.8 84 214-305 119-221 (234)
127 1w8s_A FBP aldolase, fructose- 98.0 0.00016 5.5E-09 67.2 14.9 63 239-311 169-237 (263)
128 1h1y_A D-ribulose-5-phosphate 97.9 0.00039 1.3E-08 62.9 16.7 93 215-310 104-206 (228)
129 2agk_A 1-(5-phosphoribosyl)-5- 97.9 1E-05 3.4E-10 75.3 6.1 68 239-308 168-239 (260)
130 3jr2_A Hexulose-6-phosphate sy 97.9 5E-05 1.7E-09 68.4 10.2 164 89-311 20-200 (218)
131 1vhc_A Putative KHG/KDPG aldol 97.9 0.0002 7E-09 64.9 13.8 162 132-311 25-191 (224)
132 3o63_A Probable thiamine-phosp 97.9 7.8E-05 2.7E-09 68.5 10.9 78 232-310 141-224 (243)
133 1ujp_A Tryptophan synthase alp 97.8 6.6E-05 2.2E-09 70.1 10.1 48 261-312 189-236 (271)
134 2a4a_A Deoxyribose-phosphate a 97.8 0.00011 3.8E-09 68.6 11.4 83 213-300 143-249 (281)
135 1p1x_A Deoxyribose-phosphate a 97.8 0.00011 3.8E-09 68.0 11.0 84 213-300 119-222 (260)
136 3lab_A Putative KDPG (2-keto-3 97.8 0.0001 3.4E-09 66.4 10.1 167 126-309 15-191 (217)
137 3glc_A Aldolase LSRF; TIM barr 97.8 0.00038 1.3E-08 65.7 13.8 60 239-311 199-263 (295)
138 1ka9_F Imidazole glycerol phos 97.6 0.00015 5.1E-09 66.3 9.0 69 239-310 41-109 (252)
139 1thf_D HISF protein; thermophI 97.6 8.4E-05 2.9E-09 68.0 7.3 69 239-310 40-108 (253)
140 1wbh_A KHG/KDPG aldolase; lyas 97.6 0.0014 4.9E-08 58.9 15.2 166 127-310 19-189 (214)
141 3ctl_A D-allulose-6-phosphate 97.6 0.00068 2.3E-08 61.7 13.1 68 241-309 127-200 (231)
142 3vk5_A MOEO5; TIM barrel, tran 97.6 0.00013 4.3E-09 68.1 8.2 66 239-310 196-261 (286)
143 1tqj_A Ribulose-phosphate 3-ep 97.6 0.00035 1.2E-08 63.5 11.0 164 91-310 20-206 (230)
144 1h5y_A HISF; histidine biosynt 97.5 0.00021 7.2E-09 64.7 8.1 69 239-310 43-111 (253)
145 2y88_A Phosphoribosyl isomeras 97.5 0.00042 1.4E-08 62.9 9.6 68 239-310 41-108 (244)
146 1mxs_A KDPG aldolase; 2-keto-3 97.5 0.0012 4.1E-08 59.8 12.3 87 212-310 107-199 (225)
147 3ajx_A 3-hexulose-6-phosphate 97.4 0.00099 3.4E-08 58.9 11.3 67 239-310 124-191 (207)
148 1ypf_A GMP reductase; GUAC, pu 97.4 0.0004 1.4E-08 66.7 8.7 130 101-305 46-177 (336)
149 1vzw_A Phosphoribosyl isomeras 97.4 0.0005 1.7E-08 62.5 9.0 68 239-310 42-109 (244)
150 1qap_A Quinolinic acid phospho 97.4 0.0011 3.7E-08 62.6 11.3 82 215-308 197-283 (296)
151 3vzx_A Heptaprenylglyceryl pho 97.4 0.00084 2.9E-08 60.9 10.1 75 241-328 152-226 (228)
152 1qo2_A Molecule: N-((5-phospho 97.4 0.00011 3.7E-09 67.0 4.3 68 239-310 40-107 (241)
153 2qr6_A IMP dehydrogenase/GMP r 97.4 0.00043 1.5E-08 67.8 8.5 94 209-306 140-240 (393)
154 3kts_A Glycerol uptake operon 97.3 0.00013 4.6E-09 64.3 4.2 142 124-311 31-185 (192)
155 2w6r_A Imidazole glycerol phos 97.3 0.00022 7.4E-09 65.8 5.7 68 239-309 40-107 (266)
156 3s1x_A Probable transaldolase; 97.3 0.012 4.1E-07 53.0 16.8 108 216-327 96-212 (223)
157 1q6o_A Humps, 3-keto-L-gulonat 97.3 0.0036 1.2E-07 55.9 13.5 47 263-310 150-196 (216)
158 2b7n_A Probable nicotinate-nuc 97.2 0.00061 2.1E-08 63.6 7.7 84 214-309 169-261 (273)
159 3r8r_A Transaldolase; pentose 97.2 0.014 4.9E-07 52.1 15.8 107 216-326 94-209 (212)
160 3nvt_A 3-deoxy-D-arabino-heptu 97.2 0.008 2.8E-07 58.6 15.2 202 56-308 124-349 (385)
161 3ceu_A Thiamine phosphate pyro 97.2 0.001 3.5E-08 59.4 8.1 80 230-310 92-177 (210)
162 4eiv_A Deoxyribose-phosphate a 97.2 0.0054 1.9E-07 57.3 13.1 89 213-309 137-262 (297)
163 3cwo_X Beta/alpha-barrel prote 97.1 0.0011 3.7E-08 58.8 8.0 46 263-310 163-208 (237)
164 1x1o_A Nicotinate-nucleotide p 97.1 0.0032 1.1E-07 59.1 11.3 82 215-308 184-271 (286)
165 4gj1_A 1-(5-phosphoribosyl)-5- 97.1 0.0028 9.5E-08 58.0 10.6 98 212-311 62-230 (243)
166 2czd_A Orotidine 5'-phosphate 97.1 0.00098 3.3E-08 59.4 7.0 76 239-331 129-205 (208)
167 2h6r_A Triosephosphate isomera 97.0 0.0075 2.5E-07 54.2 12.7 73 239-311 128-205 (219)
168 3exr_A RMPD (hexulose-6-phosph 97.0 0.004 1.4E-07 56.1 10.8 88 239-333 131-218 (221)
169 2jbm_A Nicotinate-nucleotide p 97.0 0.0011 3.6E-08 62.8 6.6 82 215-308 185-275 (299)
170 1xg4_A Probable methylisocitra 96.9 0.018 6.3E-07 54.1 14.9 175 90-311 26-241 (295)
171 1tqx_A D-ribulose-5-phosphate 96.9 0.011 3.8E-07 53.5 12.7 109 215-332 102-222 (227)
172 2pgw_A Muconate cycloisomerase 96.8 0.032 1.1E-06 54.1 16.0 117 133-308 146-274 (384)
173 3cu2_A Ribulose-5-phosphate 3- 96.8 0.0071 2.4E-07 55.2 10.5 68 240-309 146-221 (237)
174 3tqv_A Nicotinate-nucleotide p 96.8 0.0047 1.6E-07 57.8 9.4 82 215-308 187-273 (287)
175 3iwp_A Copper homeostasis prot 96.8 0.015 5E-07 54.3 12.4 62 239-305 176-238 (287)
176 1y0e_A Putative N-acetylmannos 96.8 0.032 1.1E-06 49.6 14.4 88 215-307 46-148 (223)
177 2f6u_A GGGPS, (S)-3-O-geranylg 96.8 0.004 1.4E-07 56.7 8.3 60 244-311 165-224 (234)
178 2ovl_A Putative racemase; stru 96.7 0.012 4E-07 57.0 12.2 115 134-306 146-273 (371)
179 3c2e_A Nicotinate-nucleotide p 96.7 0.0013 4.4E-08 62.0 4.9 82 215-308 187-280 (294)
180 3q58_A N-acetylmannosamine-6-p 96.7 0.031 1.1E-06 50.5 13.8 83 213-304 57-155 (229)
181 1to3_A Putative aldolase YIHT; 96.7 0.027 9.3E-07 53.1 13.9 65 239-311 187-260 (304)
182 3qja_A IGPS, indole-3-glycerol 96.7 0.03 1E-06 52.0 13.8 84 214-306 102-190 (272)
183 3igs_A N-acetylmannosamine-6-p 96.6 0.039 1.3E-06 50.0 14.2 82 214-304 58-155 (232)
184 3ve9_A Orotidine-5'-phosphate 96.6 0.0023 7.9E-08 57.5 5.9 79 239-335 125-204 (215)
185 1mdl_A Mandelate racemase; iso 96.6 0.01 3.6E-07 57.0 10.9 116 133-306 143-271 (359)
186 3paj_A Nicotinate-nucleotide p 96.6 0.011 3.7E-07 56.1 10.6 81 215-307 220-305 (320)
187 1viz_A PCRB protein homolog; s 96.5 0.0032 1.1E-07 57.5 6.1 50 260-311 167-216 (240)
188 4gj1_A 1-(5-phosphoribosyl)-5- 96.5 0.0023 7.8E-08 58.6 4.8 67 239-308 41-107 (243)
189 3khj_A Inosine-5-monophosphate 96.5 0.012 4.2E-07 56.9 10.1 84 215-305 85-173 (361)
190 3iv3_A Tagatose 1,6-diphosphat 96.4 0.03 1E-06 53.4 12.5 100 239-348 200-316 (332)
191 2wqp_A Polysialic acid capsule 96.4 0.11 3.9E-06 49.8 16.6 230 72-340 19-273 (349)
192 1vkf_A Glycerol uptake operon 96.4 0.0029 9.8E-08 55.5 4.7 82 215-311 93-183 (188)
193 1vpx_A Protein (transaldolase 96.4 0.23 8E-06 44.8 17.3 114 213-329 99-223 (230)
194 4dbe_A Orotidine 5'-phosphate 96.4 0.0071 2.4E-07 54.6 7.3 81 239-337 132-213 (222)
195 3l0g_A Nicotinate-nucleotide p 96.4 0.013 4.4E-07 55.1 9.2 82 215-308 196-282 (300)
196 1vli_A Spore coat polysacchari 96.3 0.18 6.2E-06 48.9 17.5 195 72-308 28-249 (385)
197 1o4u_A Type II quinolic acid p 96.3 0.0038 1.3E-07 58.5 5.5 82 215-308 181-271 (285)
198 2nql_A AGR_PAT_674P, isomerase 96.3 0.022 7.6E-07 55.4 11.2 116 133-307 163-291 (388)
199 1zco_A 2-dehydro-3-deoxyphosph 96.3 0.14 4.7E-06 47.2 15.8 92 214-308 120-230 (262)
200 3gnn_A Nicotinate-nucleotide p 96.3 0.011 3.9E-07 55.4 8.4 81 215-307 198-283 (298)
201 3w01_A Heptaprenylglyceryl pho 96.2 0.0061 2.1E-07 55.4 6.0 61 242-310 159-219 (235)
202 1qpo_A Quinolinate acid phosph 96.2 0.014 4.6E-07 54.7 8.4 82 215-308 183-272 (284)
203 1rvk_A Isomerase/lactonizing e 96.2 0.055 1.9E-06 52.4 13.0 123 133-307 148-284 (382)
204 2qgy_A Enolase from the enviro 96.1 0.046 1.6E-06 53.2 12.2 115 133-305 148-275 (391)
205 2og9_A Mandelate racemase/muco 96.1 0.04 1.4E-06 53.7 11.7 116 134-307 162-290 (393)
206 2hzg_A Mandelate racemase/muco 96.0 0.28 9.6E-06 47.7 17.3 120 132-307 143-279 (401)
207 2bdq_A Copper homeostasis prot 96.0 0.099 3.4E-06 47.0 12.6 126 130-306 70-208 (224)
208 4e38_A Keto-hydroxyglutarate-a 96.0 0.03 1E-06 50.8 9.4 77 213-304 72-153 (232)
209 1nu5_A Chloromuconate cycloiso 95.9 0.076 2.6E-06 51.1 12.5 117 133-307 141-271 (370)
210 2rdx_A Mandelate racemase/muco 95.8 0.069 2.3E-06 51.7 12.0 112 133-306 144-268 (379)
211 1jvn_A Glutamine, bifunctional 95.8 0.0069 2.4E-07 62.0 4.8 70 239-310 290-372 (555)
212 3nl6_A Thiamine biosynthetic b 95.8 0.08 2.7E-06 53.9 12.6 78 232-310 114-214 (540)
213 3ozy_A Putative mandelate race 95.7 0.054 1.9E-06 52.7 10.9 116 132-306 149-278 (389)
214 2pp0_A L-talarate/galactarate 95.7 0.076 2.6E-06 51.8 11.7 115 134-306 175-302 (398)
215 1l6w_A Fructose-6-phosphate al 95.6 0.42 1.4E-05 42.8 15.3 112 213-327 89-211 (220)
216 3ih1_A Methylisocitrate lyase; 95.6 0.35 1.2E-05 45.5 15.3 85 215-311 148-249 (305)
217 1tkk_A Similar to chloromucona 95.5 0.12 4.2E-06 49.5 12.4 117 133-307 139-270 (366)
218 3daq_A DHDPS, dihydrodipicolin 95.5 0.037 1.3E-06 51.8 8.2 88 239-329 33-125 (292)
219 4adt_A Pyridoxine biosynthetic 95.4 0.029 9.9E-07 52.8 7.3 83 212-305 65-152 (297)
220 3lab_A Putative KDPG (2-keto-3 95.4 0.068 2.3E-06 47.9 9.3 77 213-304 51-138 (217)
221 4fo4_A Inosine 5'-monophosphat 95.4 0.046 1.6E-06 53.0 8.8 85 215-305 86-177 (366)
222 3cpr_A Dihydrodipicolinate syn 95.4 0.058 2E-06 50.8 9.4 103 210-329 32-139 (304)
223 3g8r_A Probable spore coat pol 95.4 0.27 9.2E-06 47.1 14.0 230 70-341 3-262 (350)
224 3r2g_A Inosine 5'-monophosphat 95.4 0.084 2.9E-06 50.9 10.5 61 239-305 109-169 (361)
225 1yxy_A Putative N-acetylmannos 95.4 0.23 7.8E-06 44.4 12.8 84 215-302 59-157 (234)
226 2oz8_A MLL7089 protein; struct 95.3 0.48 1.6E-05 45.9 15.8 114 134-305 145-273 (389)
227 1twd_A Copper homeostasis prot 95.3 0.18 6.2E-06 46.1 11.9 122 130-305 67-198 (256)
228 3tak_A DHDPS, dihydrodipicolin 95.3 0.045 1.6E-06 51.2 8.1 103 210-329 17-124 (291)
229 1vr6_A Phospho-2-dehydro-3-deo 95.3 0.25 8.5E-06 47.4 13.3 265 25-339 49-346 (350)
230 3i4k_A Muconate lactonizing en 95.3 0.21 7.1E-06 48.4 13.1 84 213-306 180-276 (383)
231 1f6k_A N-acetylneuraminate lya 95.3 0.051 1.7E-06 50.9 8.4 103 210-329 19-127 (293)
232 2qde_A Mandelate racemase/muco 95.2 0.11 3.6E-06 50.7 10.9 115 133-306 144-271 (397)
233 3sjn_A Mandelate racemase/muco 95.2 0.085 2.9E-06 51.0 10.1 117 134-306 146-276 (374)
234 2qdd_A Mandelate racemase/muco 95.2 0.42 1.4E-05 46.0 15.1 114 133-307 144-269 (378)
235 3flu_A DHDPS, dihydrodipicolin 95.2 0.055 1.9E-06 50.8 8.4 103 209-328 22-129 (297)
236 1vhc_A Putative KHG/KDPG aldol 95.2 0.06 2E-06 48.5 8.3 76 214-304 56-136 (224)
237 1xky_A Dihydrodipicolinate syn 95.2 0.053 1.8E-06 51.0 8.3 102 209-327 27-133 (301)
238 1vs1_A 3-deoxy-7-phosphoheptul 95.2 0.52 1.8E-05 43.7 14.9 201 58-308 22-245 (276)
239 3jva_A Dipeptide epimerase; en 95.2 0.18 6.3E-06 48.2 12.2 116 133-307 138-266 (354)
240 3eez_A Putative mandelate race 95.1 0.29 9.8E-06 47.3 13.6 115 132-308 143-270 (378)
241 3si9_A DHDPS, dihydrodipicolin 95.1 0.042 1.4E-06 52.1 7.5 102 210-328 38-144 (315)
242 2wkj_A N-acetylneuraminate lya 95.1 0.064 2.2E-06 50.5 8.7 106 209-331 26-136 (303)
243 2yxg_A DHDPS, dihydrodipicolin 95.1 0.062 2.1E-06 50.2 8.5 87 239-328 31-122 (289)
244 2ehh_A DHDPS, dihydrodipicolin 95.1 0.059 2E-06 50.4 8.3 87 239-328 31-122 (294)
245 2r8w_A AGR_C_1641P; APC7498, d 95.0 0.059 2E-06 51.4 8.2 103 210-329 50-157 (332)
246 2gdq_A YITF; mandelate racemas 95.0 0.11 3.7E-06 50.4 10.2 115 133-305 135-266 (382)
247 3stp_A Galactonate dehydratase 95.0 0.19 6.4E-06 49.4 12.0 124 133-308 178-314 (412)
248 3l21_A DHDPS, dihydrodipicolin 95.0 0.056 1.9E-06 50.9 7.9 101 210-327 31-136 (304)
249 1vc4_A Indole-3-glycerol phosp 95.0 0.094 3.2E-06 48.1 9.2 65 239-309 75-139 (254)
250 3na8_A Putative dihydrodipicol 95.0 0.046 1.6E-06 51.8 7.2 103 209-328 39-146 (315)
251 4dwd_A Mandelate racemase/muco 95.0 0.21 7.2E-06 48.6 12.1 122 133-306 138-272 (393)
252 3qze_A DHDPS, dihydrodipicolin 94.9 0.057 1.9E-06 51.1 7.8 102 210-328 39-145 (314)
253 1wx0_A Transaldolase; structur 94.9 0.44 1.5E-05 42.8 13.3 100 213-315 96-204 (223)
254 3m47_A Orotidine 5'-phosphate 94.9 0.027 9.2E-07 50.9 5.3 60 239-310 147-207 (228)
255 1tzz_A Hypothetical protein L1 94.9 0.12 4.1E-06 50.2 10.3 114 134-305 165-295 (392)
256 2rfg_A Dihydrodipicolinate syn 94.9 0.06 2E-06 50.5 7.7 88 239-329 31-123 (297)
257 3b4u_A Dihydrodipicolinate syn 94.9 0.06 2.1E-06 50.4 7.7 105 209-330 18-128 (294)
258 1i4n_A Indole-3-glycerol phosp 94.8 0.097 3.3E-06 48.0 8.7 85 213-306 89-179 (251)
259 2v9d_A YAGE; dihydrodipicolini 94.8 0.062 2.1E-06 51.5 7.7 101 210-327 47-152 (343)
260 3rcy_A Mandelate racemase/muco 94.8 0.19 6.4E-06 49.7 11.4 129 133-307 145-286 (433)
261 1xm3_A Thiazole biosynthesis p 94.8 0.071 2.4E-06 49.1 7.8 38 213-250 166-208 (264)
262 1o5k_A DHDPS, dihydrodipicolin 94.8 0.06 2E-06 50.7 7.4 86 239-327 43-133 (306)
263 1w0m_A TIM, triosephosphate is 94.7 0.58 2E-05 42.1 13.5 39 273-311 170-208 (226)
264 2agk_A 1-(5-phosphoribosyl)-5- 94.7 0.02 6.8E-07 52.8 3.9 61 239-310 48-108 (260)
265 3m5v_A DHDPS, dihydrodipicolin 94.7 0.077 2.6E-06 49.8 8.0 87 239-328 38-130 (301)
266 3tj4_A Mandelate racemase; eno 94.7 0.24 8.4E-06 47.7 11.8 114 134-305 151-278 (372)
267 1hg3_A Triosephosphate isomera 94.7 1.1 3.8E-05 40.2 15.3 49 263-311 163-211 (225)
268 3fkr_A L-2-keto-3-deoxyarabona 94.7 0.072 2.5E-06 50.3 7.8 106 209-328 23-133 (309)
269 3nav_A Tryptophan synthase alp 94.7 0.084 2.9E-06 48.9 8.0 37 214-250 197-238 (271)
270 2vc6_A MOSA, dihydrodipicolina 94.6 0.056 1.9E-06 50.6 6.8 87 239-328 31-122 (292)
271 3s5o_A 4-hydroxy-2-oxoglutarat 94.6 0.091 3.1E-06 49.5 8.3 105 209-328 29-138 (307)
272 2p8b_A Mandelate racemase/muco 94.6 0.48 1.6E-05 45.4 13.6 116 133-307 140-269 (369)
273 2ojp_A DHDPS, dihydrodipicolin 94.6 0.07 2.4E-06 49.9 7.4 101 210-327 17-122 (292)
274 3e96_A Dihydrodipicolinate syn 94.6 0.051 1.7E-06 51.5 6.5 103 210-330 28-135 (316)
275 3d0c_A Dihydrodipicolinate syn 94.6 0.054 1.8E-06 51.3 6.5 103 209-329 27-134 (314)
276 3qfe_A Putative dihydrodipicol 94.5 0.1 3.6E-06 49.4 8.5 103 210-327 27-134 (318)
277 1wbh_A KHG/KDPG aldolase; lyas 94.5 0.11 3.9E-06 46.3 8.1 76 214-304 55-135 (214)
278 1s2w_A Phosphoenolpyruvate pho 94.4 0.9 3.1E-05 42.5 14.6 65 239-311 180-244 (295)
279 2yyu_A Orotidine 5'-phosphate 94.4 0.069 2.4E-06 48.6 6.7 58 239-310 153-220 (246)
280 1zfj_A Inosine monophosphate d 94.4 0.065 2.2E-06 53.6 7.1 246 41-305 12-302 (491)
281 3dg3_A Muconate cycloisomerase 94.4 0.4 1.4E-05 46.0 12.5 86 214-309 172-270 (367)
282 3toy_A Mandelate racemase/muco 94.3 0.35 1.2E-05 46.9 11.8 116 133-306 166-295 (383)
283 3dz1_A Dihydrodipicolinate syn 94.2 0.15 5E-06 48.2 8.7 103 210-331 24-131 (313)
284 3h5d_A DHDPS, dihydrodipicolin 94.1 0.11 3.8E-06 49.1 7.7 86 239-327 38-129 (311)
285 3tfx_A Orotidine 5'-phosphate 94.1 0.098 3.3E-06 48.2 7.0 74 239-332 154-237 (259)
286 3tsm_A IGPS, indole-3-glycerol 94.1 0.2 7E-06 46.3 9.2 65 239-309 89-153 (272)
287 2hxt_A L-fuconate dehydratase; 94.0 0.37 1.3E-05 47.5 11.5 114 134-305 198-324 (441)
288 3ugv_A Enolase; enzyme functio 94.0 0.36 1.2E-05 46.9 11.2 86 213-308 205-303 (390)
289 3ldv_A Orotidine 5'-phosphate 94.0 0.081 2.8E-06 48.6 6.2 73 239-331 172-254 (255)
290 2ps2_A Putative mandelate race 94.0 0.37 1.3E-05 46.3 11.2 44 262-307 227-271 (371)
291 4e5t_A Mandelate racemase / mu 93.9 0.28 9.5E-06 47.9 10.4 128 133-306 150-290 (404)
292 3bjs_A Mandelate racemase/muco 93.9 0.17 5.7E-06 49.9 8.9 114 133-305 183-311 (428)
293 2poz_A Putative dehydratase; o 93.9 0.4 1.4E-05 46.4 11.5 132 133-305 136-280 (392)
294 3lye_A Oxaloacetate acetyl hyd 93.9 1.2 4E-05 42.0 14.0 63 239-311 188-253 (307)
295 3q45_A Mandelate racemase/muco 93.8 0.38 1.3E-05 46.2 11.1 115 133-306 139-266 (368)
296 3ru6_A Orotidine 5'-phosphate 93.8 0.076 2.6E-06 50.0 5.8 58 239-310 168-235 (303)
297 3mqt_A Mandelate racemase/muco 93.8 0.39 1.3E-05 46.7 11.0 84 213-306 186-283 (394)
298 3rr1_A GALD, putative D-galact 93.8 0.24 8.3E-06 48.4 9.6 125 132-306 123-260 (405)
299 1pii_A N-(5'phosphoribosyl)ant 93.7 0.27 9.2E-06 48.8 9.8 85 213-306 96-185 (452)
300 2gl5_A Putative dehydratase pr 93.6 0.36 1.2E-05 47.0 10.6 83 213-305 204-299 (410)
301 3eb2_A Putative dihydrodipicol 93.6 0.046 1.6E-06 51.4 4.0 102 210-328 20-126 (300)
302 1mxs_A KDPG aldolase; 2-keto-3 93.6 0.12 4E-06 46.6 6.4 75 215-304 66-145 (225)
303 3a5f_A Dihydrodipicolinate syn 93.6 0.074 2.5E-06 49.7 5.3 86 212-311 19-109 (291)
304 3go2_A Putative L-alanine-DL-g 93.5 0.86 2.9E-05 44.5 13.1 82 213-306 199-293 (409)
305 4dpp_A DHDPS 2, dihydrodipicol 93.5 0.13 4.4E-06 49.7 7.0 86 239-327 90-180 (360)
306 4af0_A Inosine-5'-monophosphat 93.5 0.26 9E-06 49.7 9.3 245 41-305 60-350 (556)
307 3mkc_A Racemase; metabolic pro 93.4 0.49 1.7E-05 46.0 11.0 84 213-306 191-288 (394)
308 2o56_A Putative mandelate race 93.3 0.39 1.3E-05 46.7 10.2 83 213-305 201-296 (407)
309 3ddm_A Putative mandelate race 93.3 0.32 1.1E-05 47.3 9.5 83 213-305 185-281 (392)
310 1chr_A Chloromuconate cycloiso 93.2 0.63 2.1E-05 44.7 11.5 84 213-306 174-270 (370)
311 2yw3_A 4-hydroxy-2-oxoglutarat 93.2 0.35 1.2E-05 42.7 8.8 74 215-304 53-130 (207)
312 2hmc_A AGR_L_411P, dihydrodipi 93.1 0.14 4.8E-06 49.1 6.6 100 210-328 42-146 (344)
313 4e4u_A Mandalate racemase/muco 93.1 0.46 1.6E-05 46.5 10.4 127 133-305 143-282 (412)
314 3tr2_A Orotidine 5'-phosphate 93.1 0.14 4.7E-06 46.6 6.1 58 239-310 154-221 (239)
315 3sbf_A Mandelate racemase / mu 93.0 0.52 1.8E-05 45.9 10.7 140 132-306 131-283 (401)
316 2ox4_A Putative mandelate race 93.0 0.37 1.3E-05 46.8 9.6 133 134-307 146-292 (403)
317 1eix_A Orotidine 5'-monophosph 93.0 0.1 3.5E-06 47.4 5.2 58 239-310 159-226 (245)
318 3vcn_A Mannonate dehydratase; 93.0 0.69 2.4E-05 45.4 11.5 85 212-306 212-309 (425)
319 4avf_A Inosine-5'-monophosphat 92.8 0.19 6.7E-06 50.4 7.4 250 42-305 11-298 (490)
320 3ro6_B Putative chloromuconate 92.8 0.3 1E-05 46.8 8.4 117 133-308 139-269 (356)
321 3vnd_A TSA, tryptophan synthas 92.8 0.31 1.1E-05 45.0 8.1 38 213-250 194-236 (267)
322 1sjd_A N-acylamino acid racema 92.7 1.1 3.8E-05 42.8 12.4 43 261-305 220-263 (368)
323 2zad_A Muconate cycloisomerase 92.7 1.5 5.2E-05 41.4 13.2 42 261-304 222-264 (345)
324 1tqj_A Ribulose-phosphate 3-ep 92.7 0.78 2.7E-05 41.1 10.5 124 132-307 13-143 (230)
325 3flu_A DHDPS, dihydrodipicolin 92.7 5.4 0.00019 37.0 16.7 175 73-307 13-213 (297)
326 3tji_A Mandelate racemase/muco 92.7 0.53 1.8E-05 46.3 10.1 140 132-306 152-304 (422)
327 3ffs_A Inosine-5-monophosphate 92.6 0.16 5.6E-06 49.6 6.3 60 239-305 153-212 (400)
328 1dbt_A Orotidine 5'-phosphate 92.6 0.14 4.6E-06 46.4 5.3 58 239-310 152-219 (239)
329 3r4e_A Mandelate racemase/muco 92.6 0.43 1.5E-05 46.8 9.3 149 132-306 141-302 (418)
330 2qq6_A Mandelate racemase/muco 92.4 0.57 2E-05 45.6 10.0 84 213-306 196-292 (410)
331 1rpx_A Protein (ribulose-phosp 92.4 1.4 4.8E-05 39.0 11.8 124 128-305 15-147 (230)
332 2v82_A 2-dehydro-3-deoxy-6-pho 92.3 0.47 1.6E-05 41.5 8.5 76 214-304 46-127 (212)
333 3my9_A Muconate cycloisomerase 92.1 0.59 2E-05 45.0 9.6 84 214-307 178-274 (377)
334 4fxs_A Inosine-5'-monophosphat 92.1 0.27 9.3E-06 49.4 7.3 243 42-305 12-300 (496)
335 3mwc_A Mandelate racemase/muco 92.0 1.5 5.3E-05 42.5 12.5 44 262-307 243-287 (400)
336 1jcn_A Inosine monophosphate d 92.0 0.3 1E-05 49.2 7.5 61 239-305 264-324 (514)
337 3v3w_A Starvation sensing prot 91.9 0.71 2.4E-05 45.3 10.0 84 213-306 212-308 (424)
338 3usb_A Inosine-5'-monophosphat 91.7 0.6 2E-05 47.1 9.4 243 42-305 36-325 (511)
339 3r0u_A Enzyme of enolase super 91.6 1.9 6.6E-05 41.5 12.6 117 133-308 141-272 (379)
340 3q94_A Fructose-bisphosphate a 91.5 3.5 0.00012 38.3 13.7 100 239-341 169-285 (288)
341 1vrd_A Inosine-5'-monophosphat 91.3 0.38 1.3E-05 48.1 7.5 61 239-305 246-306 (494)
342 1xky_A Dihydrodipicolinate syn 91.1 9.5 0.00032 35.4 18.1 178 73-310 18-221 (301)
343 3t6c_A RSPA, putative MAND fam 91.1 1.5 5.1E-05 43.2 11.4 84 213-306 226-322 (440)
344 3gd6_A Muconate cycloisomerase 91.1 3.3 0.00011 39.9 13.8 115 133-308 141-271 (391)
345 2c6q_A GMP reductase 2; TIM ba 91.1 0.79 2.7E-05 43.9 9.1 61 239-305 127-189 (351)
346 2ze3_A DFA0005; organic waste 91.1 4.3 0.00015 37.4 13.8 59 239-311 178-238 (275)
347 4ab4_A Xenobiotic reductase B; 91.0 2.9 9.9E-05 40.1 13.0 88 62-154 7-97 (362)
348 3f4w_A Putative hexulose 6 pho 90.7 1.6 5.5E-05 37.9 10.2 37 213-249 146-187 (211)
349 1jub_A Dihydroorotate dehydrog 90.7 0.59 2E-05 43.6 7.7 155 71-250 93-272 (311)
350 1gvf_A Tagatose-bisphosphate a 90.7 4.1 0.00014 37.8 13.3 100 239-341 165-281 (286)
351 3tha_A Tryptophan synthase alp 90.7 0.47 1.6E-05 43.4 6.7 37 214-250 188-228 (252)
352 1vqt_A Orotidine 5'-phosphate 90.6 0.15 5E-06 45.5 3.2 44 264-311 146-198 (213)
353 1r0m_A N-acylamino acid racema 90.6 2.6 8.9E-05 40.3 12.4 43 261-305 226-269 (375)
354 2ehh_A DHDPS, dihydrodipicolin 90.5 11 0.00036 34.8 16.3 174 73-307 7-207 (294)
355 3tak_A DHDPS, dihydrodipicolin 90.5 11 0.00036 34.8 16.8 175 73-307 7-207 (291)
356 1eep_A Inosine 5'-monophosphat 90.4 0.47 1.6E-05 46.2 7.0 61 239-305 162-222 (404)
357 3i6e_A Muconate cycloisomerase 90.3 1.6 5.4E-05 42.2 10.6 84 214-307 180-275 (385)
358 1nsj_A PRAI, phosphoribosyl an 90.3 1.9 6.3E-05 38.1 10.1 84 213-308 87-183 (205)
359 3eoo_A Methylisocitrate lyase; 90.2 6.2 0.00021 36.8 14.1 62 239-311 181-245 (298)
360 2hjp_A Phosphonopyruvate hydro 90.2 7.1 0.00024 36.2 14.5 65 239-311 176-241 (290)
361 3zwt_A Dihydroorotate dehydrog 90.0 0.89 3E-05 43.8 8.5 101 123-250 221-328 (367)
362 2zc8_A N-acylamino acid racema 89.9 3.2 0.00011 39.5 12.4 42 262-305 220-262 (369)
363 4aaj_A N-(5'-phosphoribosyl)an 89.9 1.2 4.2E-05 40.0 8.8 90 208-308 98-205 (228)
364 2r91_A 2-keto-3-deoxy-(6-phosp 89.9 0.98 3.3E-05 41.8 8.4 85 239-329 29-119 (286)
365 1h1y_A D-ribulose-5-phosphate 89.7 3.2 0.00011 36.8 11.4 122 132-307 15-147 (228)
366 3pm6_A Putative fructose-bisph 89.7 4.9 0.00017 37.6 12.9 105 239-343 181-298 (306)
367 1ujp_A Tryptophan synthase alp 89.5 0.52 1.8E-05 43.5 6.2 37 213-250 190-230 (271)
368 3vav_A 3-methyl-2-oxobutanoate 89.5 3.3 0.00011 38.2 11.4 93 211-305 15-126 (275)
369 3b0p_A TRNA-dihydrouridine syn 89.5 2.3 7.8E-05 40.5 10.9 38 211-249 182-225 (350)
370 2ekc_A AQ_1548, tryptophan syn 89.4 0.49 1.7E-05 43.3 5.9 37 214-250 195-235 (262)
371 1wv2_A Thiazole moeity, thiazo 89.4 1.5 5E-05 40.2 8.8 104 123-250 102-217 (265)
372 1qop_A Tryptophan synthase alp 89.4 1.6 5.6E-05 39.8 9.4 38 213-250 193-235 (268)
373 3na8_A Putative dihydrodipicol 89.4 14 0.00047 34.5 19.9 176 72-307 29-231 (315)
374 3p3b_A Mandelate racemase/muco 89.2 1.2 4.2E-05 43.0 8.8 81 213-305 187-285 (392)
375 3fs2_A 2-dehydro-3-deoxyphosph 89.2 0.87 3E-05 42.6 7.4 91 213-308 144-263 (298)
376 3gka_A N-ethylmaleimide reduct 89.2 4.2 0.00014 38.9 12.5 87 63-154 16-105 (361)
377 2isw_A Putative fructose-1,6-b 88.8 6.9 0.00024 36.9 13.3 100 239-341 163-304 (323)
378 1z41_A YQJM, probable NADH-dep 88.5 3.8 0.00013 38.7 11.7 86 122-248 209-306 (338)
379 1v5x_A PRA isomerase, phosphor 88.5 5.6 0.00019 34.8 11.9 57 243-308 118-177 (203)
380 3fok_A Uncharacterized protein 88.2 1.6 5.6E-05 40.8 8.5 58 239-310 210-278 (307)
381 1mzh_A Deoxyribose-phosphate a 88.2 4.4 0.00015 36.0 11.2 83 118-249 112-204 (225)
382 3bo9_A Putative nitroalkan dio 88.1 2.4 8.3E-05 39.9 9.9 76 215-304 67-150 (326)
383 1rvg_A Fructose-1,6-bisphospha 88.0 12 0.0004 35.0 14.3 101 239-341 163-302 (305)
384 3daq_A DHDPS, dihydrodipicolin 88.0 16 0.00055 33.6 15.6 175 72-307 8-209 (292)
385 3sz8_A 2-dehydro-3-deoxyphosph 87.9 1.8 6.3E-05 40.1 8.6 125 213-340 123-278 (285)
386 1zlp_A PSR132, petal death pro 87.8 9.2 0.00032 35.9 13.6 62 239-311 199-263 (318)
387 3fa4_A 2,3-dimethylmalate lyas 87.8 7.7 0.00026 36.2 12.9 63 239-311 180-245 (302)
388 1m3u_A 3-methyl-2-oxobutanoate 87.7 16 0.00056 33.3 16.5 33 239-283 171-203 (264)
389 2v9d_A YAGE; dihydrodipicolini 87.7 13 0.00044 35.2 14.7 84 72-156 36-133 (343)
390 3eb2_A Putative dihydrodipicol 87.7 17 0.00059 33.5 17.0 84 72-156 9-106 (300)
391 2vc6_A MOSA, dihydrodipicolina 87.7 17 0.00058 33.4 19.3 174 73-307 7-207 (292)
392 3b8i_A PA4872 oxaloacetate dec 87.7 12 0.00041 34.6 14.1 62 239-311 178-240 (287)
393 3qze_A DHDPS, dihydrodipicolin 87.6 18 0.00061 33.7 18.4 176 72-307 28-229 (314)
394 1f76_A Dihydroorotate dehydrog 87.5 2 6.7E-05 40.5 8.9 100 123-249 212-318 (336)
395 1yad_A Regulatory protein TENI 87.3 5.5 0.00019 34.8 11.2 40 211-250 150-193 (221)
396 1o66_A 3-methyl-2-oxobutanoate 87.2 18 0.00061 33.2 16.8 33 239-283 171-203 (275)
397 3si9_A DHDPS, dihydrodipicolin 87.2 19 0.00065 33.6 18.7 176 72-307 27-229 (315)
398 3i65_A Dihydroorotate dehydrog 87.2 1.2 4.1E-05 43.7 7.2 99 123-250 269-375 (415)
399 3tcs_A Racemase, putative; PSI 87.1 8.6 0.00029 37.0 13.3 85 213-307 185-282 (388)
400 2nuw_A 2-keto-3-deoxygluconate 87.0 0.98 3.4E-05 41.9 6.3 99 210-328 15-119 (288)
401 3dgb_A Muconate cycloisomerase 86.9 5.5 0.00019 38.2 11.8 84 214-307 181-277 (382)
402 3hjz_A Transaldolase B; parach 86.9 6.8 0.00023 37.1 12.0 96 213-313 140-257 (334)
403 4e4f_A Mannonate dehydratase; 86.8 1.9 6.5E-05 42.3 8.6 83 214-306 215-310 (426)
404 2rfg_A Dihydrodipicolinate syn 86.8 19 0.00066 33.2 16.1 82 73-156 7-102 (297)
405 1w3i_A EDA, 2-keto-3-deoxy glu 86.7 1.4 4.8E-05 40.9 7.2 99 210-328 15-119 (293)
406 2fli_A Ribulose-phosphate 3-ep 86.7 4.2 0.00014 35.3 10.1 83 213-304 49-137 (220)
407 4ef8_A Dihydroorotate dehydrog 86.7 1.2 4.1E-05 42.7 6.8 109 120-250 191-307 (354)
408 2z6i_A Trans-2-enoyl-ACP reduc 86.6 4.8 0.00016 37.8 11.0 107 91-250 78-192 (332)
409 4dye_A Isomerase; enolase fami 86.5 6 0.0002 38.3 11.9 82 214-307 200-293 (398)
410 2gjl_A Hypothetical protein PA 86.5 3.6 0.00012 38.5 10.1 76 215-304 57-144 (328)
411 2tps_A Protein (thiamin phosph 86.3 5.1 0.00017 34.9 10.4 40 211-250 157-201 (227)
412 3dip_A Enolase; structural gen 86.2 2.9 9.8E-05 40.7 9.4 84 213-305 199-295 (410)
413 3qw3_A Orotidine-5-phosphate d 85.8 1.7 5.9E-05 39.7 7.1 77 240-334 168-251 (255)
414 1xi3_A Thiamine phosphate pyro 85.8 5.5 0.00019 34.3 10.3 40 211-250 148-191 (215)
415 2qkf_A 3-deoxy-D-manno-octulos 85.7 2.5 8.4E-05 39.1 8.2 94 213-309 118-240 (280)
416 1vli_A Spore coat polysacchari 85.7 11 0.00036 36.5 12.9 79 215-304 104-190 (385)
417 2nv1_A Pyridoxal biosynthesis 85.7 4.9 0.00017 37.3 10.4 83 213-303 9-105 (305)
418 3gr7_A NADPH dehydrogenase; fl 85.6 8.4 0.00029 36.4 12.2 86 122-248 209-306 (340)
419 3iwp_A Copper homeostasis prot 85.5 2.1 7.3E-05 39.7 7.6 69 233-305 46-131 (287)
420 3ngj_A Deoxyribose-phosphate a 85.5 6.3 0.00022 35.5 10.6 70 239-308 105-180 (239)
421 3kts_A Glycerol uptake operon 85.4 0.89 3.1E-05 39.8 4.7 40 212-251 137-181 (192)
422 3n9r_A Fructose-bisphosphate a 85.3 15 0.00053 34.2 13.5 101 239-341 165-304 (307)
423 3ajx_A 3-hexulose-6-phosphate 85.3 8.3 0.00028 33.1 11.2 83 214-305 41-134 (207)
424 3vav_A 3-methyl-2-oxobutanoate 85.3 23 0.00077 32.6 16.1 33 239-283 183-215 (275)
425 3tml_A 2-dehydro-3-deoxyphosph 85.2 1.9 6.6E-05 40.1 7.2 91 213-308 120-245 (288)
426 1vyr_A Pentaerythritol tetrani 85.1 6.2 0.00021 37.7 11.1 36 213-248 282-322 (364)
427 1tv5_A Dhodehase, dihydroorota 85.1 4.3 0.00015 40.0 10.1 98 123-249 297-402 (443)
428 2wqp_A Polysialic acid capsule 85.0 11 0.00039 35.8 12.7 139 132-304 31-180 (349)
429 2e6f_A Dihydroorotate dehydrog 84.8 2.6 9E-05 39.1 8.1 107 122-249 160-273 (314)
430 3bw2_A 2-nitropropane dioxygen 84.8 6.1 0.00021 37.7 10.9 53 239-304 119-171 (369)
431 2r8w_A AGR_C_1641P; APC7498, d 84.7 26 0.0009 32.8 19.4 178 73-307 40-244 (332)
432 3fcp_A L-Ala-D/L-Glu epimerase 84.3 8.9 0.0003 36.7 11.9 84 214-307 180-276 (381)
433 1o60_A 2-dehydro-3-deoxyphosph 83.6 3.3 0.00011 38.5 8.1 93 213-308 121-242 (292)
434 2zbt_A Pyridoxal biosynthesis 83.6 2.9 0.0001 38.5 7.8 73 224-302 20-104 (297)
435 4e8g_A Enolase, mandelate race 83.4 10 0.00035 36.5 11.9 45 261-307 245-290 (391)
436 3o63_A Probable thiamine-phosp 83.3 8.1 0.00028 34.8 10.5 40 211-250 175-220 (243)
437 1p0k_A Isopentenyl-diphosphate 83.2 7.3 0.00025 36.7 10.6 80 224-305 115-209 (349)
438 3fv9_G Mandelate racemase/muco 83.0 9 0.00031 36.8 11.3 120 132-307 143-275 (386)
439 2gou_A Oxidoreductase, FMN-bin 82.8 6.1 0.00021 37.8 9.9 36 213-248 281-321 (365)
440 3jr2_A Hexulose-6-phosphate sy 82.8 9.1 0.00031 33.5 10.4 83 214-305 47-139 (218)
441 2nwr_A 2-dehydro-3-deoxyphosph 82.7 2.4 8.3E-05 38.9 6.7 90 213-308 107-225 (267)
442 2htm_A Thiazole biosynthesis p 82.7 1.6 5.4E-05 40.1 5.3 38 213-250 164-208 (268)
443 3hgj_A Chromate reductase; TIM 82.5 13 0.00045 35.1 12.1 85 124-248 221-317 (349)
444 1twd_A Copper homeostasis prot 82.1 5.4 0.00018 36.3 8.7 65 234-305 9-93 (256)
445 3oa3_A Aldolase; structural ge 81.7 6.6 0.00023 36.4 9.3 70 239-308 136-211 (288)
446 3l5l_A Xenobiotic reductase A; 81.3 10 0.00035 36.1 10.9 85 124-248 227-324 (363)
447 3ovp_A Ribulose-phosphate 3-ep 81.2 7.7 0.00026 34.5 9.4 37 213-249 156-197 (228)
448 1o5k_A DHDPS, dihydrodipicolin 81.1 34 0.0012 31.6 17.0 83 72-156 18-114 (306)
449 4a35_A Mitochondrial enolase s 80.9 16 0.00055 35.8 12.4 45 261-305 283-329 (441)
450 3a5f_A Dihydrodipicolinate syn 80.9 33 0.0011 31.3 16.4 83 72-156 7-103 (291)
451 3eoo_A Methylisocitrate lyase; 80.9 12 0.00042 34.8 10.9 87 216-305 13-118 (298)
452 4dxk_A Mandelate racemase / mu 80.8 3.3 0.00011 40.1 7.3 83 213-305 196-291 (400)
453 4a29_A Engineered retro-aldol 80.4 4.3 0.00015 37.0 7.4 62 239-306 73-134 (258)
454 1tqx_A D-ribulose-5-phosphate 80.1 7.4 0.00025 34.7 8.8 38 212-249 159-201 (227)
455 3g8r_A Probable spore coat pol 80.0 15 0.0005 35.1 11.3 81 212-303 75-166 (350)
456 3ik4_A Mandelate racemase/muco 79.7 20 0.00067 34.1 12.3 43 262-306 228-271 (365)
457 3b4u_A Dihydrodipicolinate syn 79.6 37 0.0013 31.1 17.1 83 73-156 9-105 (294)
458 1vhn_A Putative flavin oxidore 79.3 3.5 0.00012 38.5 6.8 34 213-248 173-212 (318)
459 3d0c_A Dihydrodipicolinate syn 79.3 40 0.0014 31.3 18.7 174 73-307 17-216 (314)
460 3o07_A Pyridoxine biosynthesis 79.2 1.7 5.7E-05 40.3 4.2 39 212-250 185-230 (291)
461 1me8_A Inosine-5'-monophosphat 79.1 2.9 9.8E-05 41.9 6.4 63 239-306 251-313 (503)
462 3kht_A Response regulator; PSI 78.9 17 0.00057 28.3 10.0 88 215-308 19-112 (144)
463 2hjp_A Phosphonopyruvate hydro 78.5 22 0.00074 32.9 11.8 88 217-305 7-110 (290)
464 1oy0_A Ketopantoate hydroxymet 78.5 41 0.0014 30.9 13.7 136 75-284 36-222 (281)
465 3sr7_A Isopentenyl-diphosphate 78.3 2.5 8.6E-05 40.6 5.4 64 239-305 165-237 (365)
466 3qw4_B UMP synthase; N-termina 78.2 2.3 7.9E-05 42.1 5.3 60 240-311 169-235 (453)
467 2pcq_A Putative dihydrodipicol 78.1 1.4 4.7E-05 40.8 3.4 100 210-329 14-117 (283)
468 3ih1_A Methylisocitrate lyase; 77.8 15 0.0005 34.4 10.4 85 217-305 21-124 (305)
469 3l21_A DHDPS, dihydrodipicolin 77.7 44 0.0015 30.8 18.5 84 72-156 20-117 (304)
470 3oix_A Putative dihydroorotate 77.7 3.9 0.00013 38.9 6.5 39 212-250 260-305 (345)
471 3eul_A Possible nitrate/nitrit 77.5 24 0.00081 27.7 10.6 86 216-308 30-120 (152)
472 4e7p_A Response regulator; DNA 77.5 24 0.00082 27.7 10.7 74 228-308 47-125 (150)
473 3m5v_A DHDPS, dihydrodipicolin 77.4 44 0.0015 30.7 19.8 173 73-307 14-214 (301)
474 1wa3_A 2-keto-3-deoxy-6-phosph 77.3 13 0.00043 31.9 9.3 59 239-306 32-90 (205)
475 1xg4_A Probable methylisocitra 76.9 12 0.00042 34.7 9.6 85 217-304 9-113 (295)
476 3tkf_A Transaldolase; structur 76.8 31 0.0011 32.7 12.4 97 213-314 163-282 (345)
477 1p4c_A L(+)-mandelate dehydrog 75.5 3.7 0.00013 39.6 5.8 41 262-305 213-253 (380)
478 2bdq_A Copper homeostasis prot 75.3 5.3 0.00018 35.6 6.3 60 239-305 18-96 (224)
479 3o1n_A 3-dehydroquinate dehydr 75.2 36 0.0012 31.1 12.2 28 132-159 48-75 (276)
480 2yxg_A DHDPS, dihydrodipicolin 75.2 32 0.0011 31.4 12.0 24 132-155 17-40 (289)
481 3inp_A D-ribulose-phosphate 3- 74.9 8.6 0.0003 34.7 7.8 37 213-249 178-223 (246)
482 1ea0_A Glutamate synthase [NAD 74.3 22 0.00075 40.1 12.1 114 239-352 597-725 (1479)
483 3m16_A Transaldolase; dimer, m 74.2 32 0.0011 32.4 11.7 99 212-313 143-261 (329)
484 1o66_A 3-methyl-2-oxobutanoate 74.2 43 0.0015 30.6 12.3 90 213-304 5-114 (275)
485 1s2w_A Phosphoenolpyruvate pho 73.8 13 0.00044 34.5 8.8 87 216-305 10-114 (295)
486 3e96_A Dihydrodipicolinate syn 73.4 20 0.00069 33.3 10.2 23 133-155 30-52 (316)
487 1m3u_A 3-methyl-2-oxobutanoate 73.1 40 0.0014 30.7 11.8 90 213-304 5-113 (264)
488 3vk5_A MOEO5; TIM barrel, tran 72.9 4.5 0.00015 37.4 5.3 40 211-250 211-257 (286)
489 3fkr_A L-2-keto-3-deoxyarabona 72.7 59 0.002 30.0 18.2 84 72-156 13-110 (309)
490 3eod_A Protein HNR; response r 72.5 28 0.00095 26.3 9.5 84 216-308 22-110 (130)
491 1gox_A (S)-2-hydroxy-acid oxid 72.3 5.5 0.00019 38.1 6.1 42 262-306 213-254 (370)
492 1w8s_A FBP aldolase, fructose- 72.2 44 0.0015 30.1 12.0 71 235-307 97-181 (263)
493 2cu0_A Inosine-5'-monophosphat 71.9 3.2 0.00011 41.2 4.5 60 42-107 16-77 (486)
494 3b8i_A PA4872 oxaloacetate dec 71.9 24 0.00083 32.5 10.2 88 217-305 13-117 (287)
495 3ctl_A D-allulose-6-phosphate 71.4 13 0.00044 33.2 8.0 37 213-249 150-195 (231)
496 2qjg_A Putative aldolase MJ040 71.3 19 0.00063 32.4 9.2 37 212-248 189-236 (273)
497 3noy_A 4-hydroxy-3-methylbut-2 71.1 12 0.00042 35.7 8.0 55 239-304 56-111 (366)
498 2ojp_A DHDPS, dihydrodipicolin 71.0 31 0.0011 31.6 10.8 23 133-155 19-41 (292)
499 1gte_A Dihydropyrimidine dehyd 70.6 20 0.0007 38.9 10.8 87 216-304 624-734 (1025)
500 1ub3_A Aldolase protein; schif 70.3 16 0.00054 32.4 8.2 69 239-307 81-155 (220)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=1.7e-80 Score=602.32 Aligned_cols=343 Identities=45% Similarity=0.739 Sum_probs=316.7
Q ss_pred CCCChHHHHHHHHHhCCccchhhhcCCccchhhHHHhHhcccceeeeccccCCCCCCccceeEcCcccCCceEecccccc
Q 017781 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (366)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iApm~~~ 82 (366)
+++|++|||+.||++||+++|+|++||++||.|+++|+++|++|.|+||+|+|++++||+|++||+++++||++||++++
T Consensus 1 ~~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~ 80 (352)
T 3sgz_A 1 PLVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFH 80 (352)
T ss_dssp CCCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred CCCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhccCC-CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCC
Q 017781 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (366)
Q Consensus 83 ~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~-~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~ 161 (366)
++.||++|.++|++|+++|+++++|+++++++|||+++.+ ++.|||||+++|++.+.++++||+++||++|++|+|+|+
T Consensus 81 ~l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~ 160 (352)
T 3sgz_A 81 SIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPV 160 (352)
T ss_dssp GGTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSS
T ss_pred HhcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 9999999999999999999999999999999999999887 689999999999999999999999999999999999999
Q ss_pred CcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH---
Q 017781 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED--- 238 (366)
Q Consensus 162 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d--- 238 (366)
.|+|++|++++|.+|.+++++++.+... .... ........|+.++|+.|+|+|+.+++||++|++.+.++
T Consensus 161 ~g~R~~d~r~~~~~p~~~~~~~~~~~~~----~~~~---~~~~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~ 233 (352)
T 3sgz_A 161 LGNRRRDKRNQLNLEANILKAALRALKE----EKPT---QSVPVLFPKASFCWNDLSLLQSITRLPIILKGILTKEDAEL 233 (352)
T ss_dssp CCCCHHHHHHHHHSCHHHHTTCC----------------------CCCTTCCHHHHHHHHHHCCSCEEEEEECSHHHHHH
T ss_pred CCcchhhhhcCCCCCcccchhhhccccc----cccc---chhhhhccCCCCCHHHHHHHHHhcCCCEEEEecCcHHHHHH
Confidence 9999999999999997777666543210 0000 11111346888999999999999999999999999988
Q ss_pred -HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCH
Q 017781 239 -VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGE 317 (366)
Q Consensus 239 -~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~ 317 (366)
.++|+|+|+|+||||+++++++++++.|+++++++++++|||++|||+++.|++|+|++|||+|+|||||+|++++.|+
T Consensus 234 a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~ 313 (352)
T 3sgz_A 234 AMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGE 313 (352)
T ss_dssp HHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999877899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCChhhhccccee
Q 017781 318 KGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 352 (366)
Q Consensus 318 ~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~l~ 352 (366)
+||.++++.+++||+.+|.++|+++++||+++.++
T Consensus 314 ~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~ 348 (352)
T 3sgz_A 314 DGVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQ 348 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhcch
Confidence 99999999999999999999999999999998875
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=4.7e-73 Score=561.08 Aligned_cols=351 Identities=57% Similarity=0.937 Sum_probs=316.0
Q ss_pred CCCChHHHHHHHHHhCCccchhhhcCCccchhhHHHhHhcccceeeeccccCCCCCCccceeEcCcccCCceEecccccc
Q 017781 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (366)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iApm~~~ 82 (366)
.++|++|||+.||++||+.+|+|++||++||.|+++|+++|++|.|+||+|++++++||+|+|+|+++++||++||||++
T Consensus 26 ~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~~ 105 (392)
T 2nzl_A 26 RLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQ 105 (392)
T ss_dssp CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEecccccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhccCC-CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCC
Q 017781 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (366)
Q Consensus 83 ~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~-~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~ 161 (366)
.+.||++|.++|++|+++|+++++|+++++++|++.+..+ .+.|||||+++|++.+.++++|++++|++++++|+|||+
T Consensus 106 ~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~ 185 (392)
T 2nzl_A 106 RMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPY 185 (392)
T ss_dssp GGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSS
T ss_pred ccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 9999999999999999999999999999999999987654 789999999999999999999999999999999999999
Q ss_pred CcchhHHHhhhcCCCCccccccccccccC-CCc-c-ccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH
Q 017781 162 LGRREADIKNRFTLPPFLTLKNFQGLDLG-KMD-E-ANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED 238 (366)
Q Consensus 162 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d 238 (366)
.|+|++|++++|.+|.+++++++.+.... ... . ..+.....++....++.++|+.|+++|+.+++||++|++.+.++
T Consensus 186 ~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e~ 265 (392)
T 2nzl_A 186 LGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDD 265 (392)
T ss_dssp CCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEECCHHH
T ss_pred ccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecCCHHH
Confidence 99999999999999987765554211000 000 0 01111234555566888999999999999999999999999888
Q ss_pred ----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhh
Q 017781 239 ----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 314 (366)
Q Consensus 239 ----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~ 314 (366)
.++|+|+|+|+||||++.++++++++.|+++++++++++|||++|||+++.|++|+|++|||+|+|||||++++++
T Consensus 266 A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~ 345 (392)
T 2nzl_A 266 AREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAF 345 (392)
T ss_dssp HHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHh
Confidence 9999999999999999999999999999999999877899999999999999999999999999999999999988
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccceee
Q 017781 315 EGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 353 (366)
Q Consensus 315 ~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~l~~ 353 (366)
.|++|++++++.+++||+.+|.++|+++++||++..|+.
T Consensus 346 ~g~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~ 384 (392)
T 2nzl_A 346 QGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRK 384 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBC-
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhh
Confidence 899999999999999999999999999999999998865
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=2.3e-72 Score=552.46 Aligned_cols=348 Identities=34% Similarity=0.563 Sum_probs=303.5
Q ss_pred CCCCChHHHHHHHHHhCCccchhhhcCCccchhhHHHhHhcccceeeeccccCCCCCCccceeEcCcccCCceEeccccc
Q 017781 2 GEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAM 81 (366)
Q Consensus 2 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iApm~~ 81 (366)
..++|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|.|+||+|++++++||+|+|+|++++.||++|||++
T Consensus 11 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma~ 90 (368)
T 2nli_A 11 IDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIAA 90 (368)
T ss_dssp CCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEECCCSC
T ss_pred ccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeecchhh
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhccCC-CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCC
Q 017781 82 QKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (366)
Q Consensus 82 ~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~-~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p 160 (366)
+++.||++|.+++++|+++|+++++|+++++++|++.+..+ .+.|||||+++|++.+.++++|++++|+++++||+|||
T Consensus 91 ~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p 170 (368)
T 2nli_A 91 HGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADST 170 (368)
T ss_dssp GGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC
T ss_pred ccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 99999999999999999999999999999899999977543 78999999999999999999999999999999999999
Q ss_pred CCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH--
Q 017781 161 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED-- 238 (366)
Q Consensus 161 ~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d-- 238 (366)
+.|+|++|++++|.+| ++.+++.... .. ...+... .+++.+.++.++|++|+++|+.+++||++|++.++++
T Consensus 171 ~~g~r~~d~~~~~~~p--~~~~~~~~~~-~~--~~~g~~l-~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v~~~e~a~ 244 (368)
T 2nli_A 171 VSGNRDRDVKNKFVYP--FGMPIVQRYL-RG--TAEGMSL-NNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDAD 244 (368)
T ss_dssp ---CBC--------CC--SCCHHHHHHH-TT--SGGGC------CTTBCSBCCHHHHHHHHHHSSSCEEEEEECSHHHHH
T ss_pred cccchhHHHhhcccCc--chhhhhhccc-cc--CCCCchH-HhhhhccCchhhHHHHHHHHHHcCCCEEEEcCCCHHHHH
Confidence 9999999999999877 2322221000 00 0011111 2345456888999999999999999999999999988
Q ss_pred --HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcC
Q 017781 239 --VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEG 316 (366)
Q Consensus 239 --~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G 316 (366)
.++|+|+|+|+||||++.++++++++.|+++++++++++|||++|||+++.|++|+|++|||+|+|||||++++++.|
T Consensus 245 ~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G 324 (368)
T 2nli_A 245 MAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGG 324 (368)
T ss_dssp HHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcC
Confidence 999999999999999999999999999999999987789999999999999999999999999999999999998889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccceeecc
Q 017781 317 EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEW 355 (366)
Q Consensus 317 ~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~l~~~~ 355 (366)
++||+++++.+++||+.+|.++|+++++||++..++...
T Consensus 325 ~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 363 (368)
T 2nli_A 325 WQGAYSVLDYFQKDLTRVMQLTGSQNVEDLKGLDLFDNP 363 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHTCCEEECT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccccEeecc
Confidence 999999999999999999999999999999999887653
No 4
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=1.2e-70 Score=541.31 Aligned_cols=365 Identities=88% Similarity=1.328 Sum_probs=322.8
Q ss_pred CCCCChHHHHHHHHHhCCccchhhhcCCccchhhHHHhHhcccceeeeccccCCCCCCccceeEcCcccCCceEeccccc
Q 017781 2 GEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAM 81 (366)
Q Consensus 2 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iApm~~ 81 (366)
.+++|++|||+.||++||+.+|+|++||++||.|+++|+++|++|.|+||+|++++++||+|+|+|++++.||++||||+
T Consensus 2 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~ 81 (370)
T 1gox_A 2 MEITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAM 81 (370)
T ss_dssp CCCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSC
T ss_pred CcCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccch
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhccCCCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCC
Q 017781 82 QKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (366)
Q Consensus 82 ~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~ 161 (366)
+.+.||++|.+++++|+++|+++++|++++.++|++.+..+++.|||||+++|++.+.+++++++++|+++++||+|||.
T Consensus 82 ~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~ 161 (370)
T 1gox_A 82 QKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (370)
T ss_dssp GGGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSS
T ss_pred hhhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 99999999999999999999999999999999999998777889999999999999999999999999999999999999
Q ss_pred CcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH---
Q 017781 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED--- 238 (366)
Q Consensus 162 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d--- 238 (366)
.|+|++|+++++.+|..+..+++............+.....++++..++.++|+.++++++.+++||++|++.++++
T Consensus 162 ~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~ 241 (370)
T 1gox_A 162 LGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARL 241 (370)
T ss_dssp CCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHH
T ss_pred ccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHH
Confidence 99999999999988876655544321100000011122234566667888899999999999999999999999888
Q ss_pred -HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCH
Q 017781 239 -VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGE 317 (366)
Q Consensus 239 -~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~ 317 (366)
.++|+|+|+|+||||++.++++++++.++++++.+++++|||++|||+++.|+.|+|++|||+|+|||+|+++++++|+
T Consensus 242 a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~ 321 (370)
T 1gox_A 242 AVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGE 321 (370)
T ss_dssp HHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHH
T ss_pred HHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccH
Confidence 9999999999999999999999999999999999877899999999999999999999999999999999999888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCChhhhcccceeeccCCCCCCCCCCC
Q 017781 318 KGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPRL 366 (366)
Q Consensus 318 ~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~l~~~~~~~~~~~~~~~ 366 (366)
+||.++++.+.+||+.+|.++|+.+++|+++..++...++++...+.+|
T Consensus 322 ~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~~~~~~~~~~~ 370 (370)
T 1gox_A 322 AGVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWDGPSSRAVARL 370 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHhhhcceeccccccccchhhcC
Confidence 9999999999999999999999999999999999887777766665543
No 5
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=1.2e-68 Score=545.48 Aligned_cols=348 Identities=40% Similarity=0.693 Sum_probs=312.7
Q ss_pred CCCChHHHHHHHHHhCCccchhhhcCCccchhhHHHhHhcccceeeeccccCCCCCCccceeEcCcccCCceEecccccc
Q 017781 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (366)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iApm~~~ 82 (366)
.++|++|||+.||++||+.+|+|++||+++|.|+++|+++|++|.|+||+|++++++||+|+|+|+++++||+||||+++
T Consensus 121 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~~ 200 (511)
T 1kbi_A 121 NIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALC 200 (511)
T ss_dssp GCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred ccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCCCCeEeccchhc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCC-hhhHHHHHHHHH--cCCceecCCCCCCCHHHHhccC---CCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEe
Q 017781 83 KMAHP-EGEYATARAASA--AGTIMTLSSWSTSSVEEVASTG---PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (366)
Q Consensus 83 ~l~~~-~~e~~la~aa~~--~G~~~~vs~~~~~~~e~i~~~~---~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vt 156 (366)
++.|| ++|.++|++|++ +|+++++|++++.++|++.+.. ..+.|||||+++|++.+.+++++++++|+++|+||
T Consensus 201 ~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~it 280 (511)
T 1kbi_A 201 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVT 280 (511)
T ss_dssp GGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEE
T ss_pred cccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 99999 999999999999 9999999999999999998765 26899999999999999999999999999999999
Q ss_pred cCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCH
Q 017781 157 VDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTA 236 (366)
Q Consensus 157 vd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~ 236 (366)
+|+|+.|+|+++++++|..|... ...+.+ ... ....+...++....++.++|+.|+++|+.+++||++|++.+.
T Consensus 281 vd~p~~g~R~~~~r~g~~~p~~~-~~~~~g---~~~--~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~ 354 (511)
T 1kbi_A 281 VDAPSLGQREKDMKLKFSNTKAG-PKAMKK---TNV--EESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRT 354 (511)
T ss_dssp CSCSSCCCCHHHHHHHHTTCC--------C---CCC--SSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEECSH
T ss_pred CCCCCccccHHHHhccCCCCccc-cccccc---ccc--cccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeCCCH
Confidence 99999999999999999777421 110000 000 011122234444467889999999999999999999999998
Q ss_pred HH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHc-----CCCceEEEecCCCCHHHHHHHHHhCcCEEEecHH
Q 017781 237 ED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 237 ~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~-----~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~ 307 (366)
++ .++|+|+|+||||||++++.++++++.|+++++++ .+++|||++|||+++.|++|+|++|||+|+||||
T Consensus 355 e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~ 434 (511)
T 1kbi_A 355 EDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRP 434 (511)
T ss_dssp HHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 87 99999999999999999999999999999999987 3589999999999999999999999999999999
Q ss_pred HHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccceeeccC
Q 017781 308 VVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 356 (366)
Q Consensus 308 ~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~l~~~~~ 356 (366)
|++++.+.|++|+.++++.+++||+.+|.++|+.+++||++..++....
T Consensus 435 ~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~ 483 (511)
T 1kbi_A 435 FLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLSTL 483 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTTT
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHHHhhhhhh
Confidence 9999988899999999999999999999999999999999998876544
No 6
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=8.2e-68 Score=522.54 Aligned_cols=351 Identities=43% Similarity=0.751 Sum_probs=312.1
Q ss_pred CCCChHHHHHHHHHhCCccchhhhcCCccchhhHHHhHhcccceeeeccccCCCCCCccceeEcCcccCCceEecccccc
Q 017781 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (366)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~vd~st~l~g~~l~~Pi~iApm~~~ 82 (366)
+++|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|+|+||+|++++++||+|+|+|+++++||++|||+++
T Consensus 4 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~~~~ 83 (380)
T 1p4c_A 4 NLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLN 83 (380)
T ss_dssp CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCcccc
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhccCCCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 017781 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (366)
Q Consensus 83 ~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~ 162 (366)
++.||++|.++|++|+++|+++++|+++++++|++.+..+.+.|||||+++ ++...+++++++++|+++++||+|.|..
T Consensus 84 ~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~~ 162 (380)
T 1p4c_A 84 GALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAVN 162 (380)
T ss_dssp GGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred ccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCccc
Confidence 999999999999999999999999999999999998764578999999988 9999999999999999999999999999
Q ss_pred cchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH----
Q 017781 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED---- 238 (366)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d---- 238 (366)
|+|++|++++|.+|..+...++.......+......+...+.....+++++|+.|+++++.+++||++|++.++++
T Consensus 163 g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv~t~e~a~~a 242 (380)
T 1p4c_A 163 GYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDADRC 242 (380)
T ss_dssp CCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEECCHHHHHHH
T ss_pred cchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEecCcHHHHHHH
Confidence 9999999999987755444332100000010011111222333334788899999999999999999999999988
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 318 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~ 318 (366)
.++|+|+|+|+||||++.++++++++.++++++.+ ++|||++|||+++.|+.|+|++|||+|++||+|++++.+.|++
T Consensus 243 ~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~--~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~~~g~~ 320 (380)
T 1p4c_A 243 IAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT--GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGET 320 (380)
T ss_dssp HHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH--CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc--CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHHhcCHH
Confidence 99999999999999999999999999999999988 5699999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCChhhhcccceeeccC
Q 017781 319 GVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 356 (366)
Q Consensus 319 gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~l~~~~~ 356 (366)
++.++++.+.+||+.+|.++|+.+++|+++..++..+.
T Consensus 321 ~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~g~ 358 (380)
T 1p4c_A 321 GVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEGV 358 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEEEC--
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHhccCeEEeccc
Confidence 99999999999999999999999999999998877553
No 7
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=100.00 E-value=3e-44 Score=351.00 Aligned_cols=270 Identities=19% Similarity=0.302 Sum_probs=213.0
Q ss_pred hcccceeeecccc--CCCCCCccceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHH--
Q 017781 41 NAFSRILFRPRIL--IDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE-- 116 (366)
Q Consensus 41 ~~f~~i~l~pr~l--~~~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~-- 116 (366)
..||+|+|+|+.| .++++|||+|+|+|+++++||++|||++++..+++.|.++|++|+++|++|++|++... +|+
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~-le~~~ 132 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA-LKNPD 132 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc-ccCcc
Confidence 5899999999999 57889999999999999999999999999988889999999999999999999998642 121
Q ss_pred -----HhccCC-CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccC
Q 017781 117 -----VASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (366)
Q Consensus 117 -----i~~~~~-~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~ 190 (366)
+.+..| .+.+.++...... ++..+.++..|++++.+++|..
T Consensus 133 ~~~~~v~r~~P~~~~ianig~~~~~---e~~~~~ve~~~adal~ihln~~------------------------------ 179 (365)
T 3sr7_A 133 DTSYQVKKSRPHLLLATNIGLDKPY---QAGLQAVRDLQPLFLQVHINLM------------------------------ 179 (365)
T ss_dssp ------------CCEEEEEETTSCH---HHHHHHHHHHCCSCEEEEECHH------------------------------
T ss_pred ccceEehhhCCCCcEEEEeCCCCCH---HHHHHHHHhcCCCEEEEecccc------------------------------
Confidence 222224 3444455433232 2455566788999999998832
Q ss_pred CCccccchhhHHHhhhccCCCC-CH-HHHHHHHHhcCCCEEEEec---cCHHH----HHcCCcEEEEcCCCccCC-----
Q 017781 191 KMDEANDSGLAAYVAGQIDRSL-SW-KDVKWLQTITKLPILVKGV---LTAED----VQAGAAGIIVSNHGARQL----- 256 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~d~~~-~~-~~i~~lr~~~~~pv~vK~v---~~~~d----~~aGad~I~vs~~gg~~~----- 256 (366)
++.+++.+++++ +| +.|+++|+.+++||++|++ .++++ .++|+|+|+|+||||+++
T Consensus 180 ----------qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~ 249 (365)
T 3sr7_A 180 ----------QELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIEN 249 (365)
T ss_dssp ----------HHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC---------
T ss_pred ----------ccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhc
Confidence 122333356666 67 5799999999999999998 68877 999999999999999864
Q ss_pred ----------CCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHH
Q 017781 257 ----------DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEM 326 (366)
Q Consensus 257 ----------~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~ 326 (366)
+++.++.+.|.++. .+.+++|||++|||+++.|++|+|++|||+|++||+||+++.+.|+++|.++++.
T Consensus 250 ~r~~~~~~~~~~g~pt~~~L~~v~-~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~ 328 (365)
T 3sr7_A 250 RRGGNRSYLNQWGQTTAQVLLNAQ-PLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNG 328 (365)
T ss_dssp -----CGGGTTCSCBHHHHHHHHG-GGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHH
T ss_pred cccccccccccccccHHHHHHHHH-HhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHH
Confidence 67899999998764 4555899999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHcCCCChhhhcccceeecc
Q 017781 327 LREEFELAMALSGCRSLKEITRDHIVTEW 355 (366)
Q Consensus 327 l~~el~~~m~~~G~~~l~el~~~~l~~~~ 355 (366)
+++||+.+|.++|+++++||++..++..+
T Consensus 329 l~~eL~~~m~~~G~~si~eL~~~~~~~~~ 357 (365)
T 3sr7_A 329 WKEDLRLIMCALNCQTIAELRNVDYLLYG 357 (365)
T ss_dssp HHHHHHHHHHHTTCSSTGGGGGCCEEECH
T ss_pred HHHHHHHHHHHhCCcCHHHhccCCEEEcc
Confidence 99999999999999999999998777643
No 8
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=100.00 E-value=1.1e-42 Score=337.70 Aligned_cols=276 Identities=26% Similarity=0.301 Sum_probs=208.7
Q ss_pred hhhhcCCccchhhHHHhHhcccceeeeccccC--CCCCCccceeEcCcccCCceEecccccccccCChh---hHHHHHHH
Q 017781 23 FDYYASGAEDQWTLQENRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAA 97 (366)
Q Consensus 23 ~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~---e~~la~aa 97 (366)
.+|+..+..++.|+++|+.+|++|.|+||+|+ +++++||+|+|+|++++.||++|||++. |+.+ +.+++++|
T Consensus 8 ~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g~---~~~~~~~~~~la~~a 84 (332)
T 1vcf_A 8 RKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTGG---EENGERINLALAEAA 84 (332)
T ss_dssp ---------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEeccccC---CcchhHHHHHHHHHH
Confidence 48999999999999999999999999999998 7889999999999999999999999864 5554 47999999
Q ss_pred HHcCCceecCCCCCCCHHHH--------hccCC-CceE-----EEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCc
Q 017781 98 SAAGTIMTLSSWSTSSVEEV--------ASTGP-GIRF-----FQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLG 163 (366)
Q Consensus 98 ~~~G~~~~vs~~~~~~~e~i--------~~~~~-~~~~-----~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g 163 (366)
+++|+++++|++++. +++. ....+ .|.+ .|++ ..+++...+. ++..+++++.++++..
T Consensus 85 ~~~G~~~~~~~~~~~-le~~~~~~~~ql~~~~~d~pv~~~~~~~q~~-~~~~~~~~~a---~~~~~~~a~~i~~n~~--- 156 (332)
T 1vcf_A 85 EALGVGMMLGSGRIL-LERPEALRSFRVRKVAPKALLIANLGLAQLR-RYGRDDLLRL---VEMLEADALAFHVNPL--- 156 (332)
T ss_dssp HHHTCEEEEEECHHH-HHCTTTHHHHCCTTTCSSSCEEEEEEGGGGG-TCCHHHHHHH---HHHHTCSEEEEECCHH---
T ss_pred HHcCCCEEeCCchhc-ccCCCccceEEeeccCCCceeecccChhhhh-ccChHHHHHH---HhhcCCCceeeccchH---
Confidence 999999999998654 4431 11111 2222 2222 1233433333 3445788887776531
Q ss_pred chhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC--CHHHHHHHHHhcCCCEEEEec---cCHHH
Q 017781 164 RREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL--SWKDVKWLQTITKLPILVKGV---LTAED 238 (366)
Q Consensus 164 ~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~i~~lr~~~~~pv~vK~v---~~~~d 238 (366)
+++++ ..++.+ .|+.++++|+ +++||++|++ .++++
T Consensus 157 -------------------------------------~~~~~-~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~~~e~ 197 (332)
T 1vcf_A 157 -------------------------------------QEAVQ-RGDTDFRGLVERLAELLP-LPFPVMVKEVGHGLSREA 197 (332)
T ss_dssp -------------------------------------HHHHT-TSCCCCTTHHHHHHHHCS-CSSCEEEECSSSCCCHHH
T ss_pred -------------------------------------HHHhc-CCCccHHHHHHHHHHHHc-CCCCEEEEecCCCCCHHH
Confidence 01111 112222 4789999999 9999999987 78887
Q ss_pred ----HHcCCcEEEEcCCCc---------cC---------CCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHH
Q 017781 239 ----VQAGAAGIIVSNHGA---------RQ---------LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 296 (366)
Q Consensus 239 ----~~aGad~I~vs~~gg---------~~---------~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kala 296 (366)
.++|+|+|+|||||| ++ .++++++++.|.++++.++ ++|||++|||+++.|++|+|+
T Consensus 198 a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~ 276 (332)
T 1vcf_A 198 ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASGGVYTGTDGAKALA 276 (332)
T ss_dssp HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHHH
Confidence 899999999999988 55 6789999999999999885 699999999999999999999
Q ss_pred hCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 017781 297 LGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 350 (366)
Q Consensus 297 lGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~ 350 (366)
+|||+|++||||++++ +.|+++|.++++.+.+||+.+|.++|+++++||++..
T Consensus 277 ~GAd~V~igr~~l~~~-~~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~ 329 (332)
T 1vcf_A 277 LGADLLAVARPLLRPA-LEGAERVAAWIGDYLEELRTALFAIGARNPKEARGRV 329 (332)
T ss_dssp HTCSEEEECGGGHHHH-TTCHHHHHHHHHHHHHHHHHHHHHHTCSSGGGGTTCE
T ss_pred hCCChHhhhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 9999999999999997 7899999999999999999999999999999998764
No 9
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=100.00 E-value=1.3e-40 Score=326.19 Aligned_cols=269 Identities=21% Similarity=0.243 Sum_probs=218.3
Q ss_pred hcccceeeeccccC--CCCCCccceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCC------
Q 017781 41 NAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS------ 112 (366)
Q Consensus 41 ~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~------ 112 (366)
+.||+|+|+|+.|+ +.+++||+|+|+|++++.||++|||++++....+.|..+|++|+++|+++++|++...
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~ 106 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA 106 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG
T ss_pred CCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH
Confidence 57999999999998 7889999999999999999999999887755556788999999999999999998321
Q ss_pred --CHHHHhccCC-CceEEEeee----c-CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccc
Q 017781 113 --SVEEVASTGP-GIRFFQLYV----Y-KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNF 184 (366)
Q Consensus 113 --~~e~i~~~~~-~~~~~Qly~----~-~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~ 184 (366)
+.+-+++.+| .+.+-++.. + .+.+...+ .++..+++++.|+++.
T Consensus 107 ~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~---av~~~~a~al~Ihln~------------------------- 158 (368)
T 3vkj_A 107 RESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQD---AIQMIEADAIAVHLNP------------------------- 158 (368)
T ss_dssp SHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHH---HHHHTTCSEEEEECCH-------------------------
T ss_pred HhhHHHHHHhCcCcceecCcCeeecCCCCCHHHHHH---HHHHhcCCCeEEEecc-------------------------
Confidence 1111344455 344445543 2 34444333 3445688899988762
Q ss_pred cccccCCCccccchhhHHHhhhccCCCCC---HHHHHHHHHhcCCCEEEEec---cCHHH----HHcCCcEEEEcCCCc-
Q 017781 185 QGLDLGKMDEANDSGLAAYVAGQIDRSLS---WKDVKWLQTITKLPILVKGV---LTAED----VQAGAAGIIVSNHGA- 253 (366)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~i~~lr~~~~~pv~vK~v---~~~~d----~~aGad~I~vs~~gg- 253 (366)
.++.+++.+++++. ++.|+++++.+++||++|++ .++++ .++|+|+|+|+||||
T Consensus 159 ---------------~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt 223 (368)
T 3vkj_A 159 ---------------AQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGT 223 (368)
T ss_dssp ---------------HHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSB
T ss_pred ---------------hhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCC
Confidence 11122233345553 67899999999999999987 78877 999999999999999
Q ss_pred --------cC--------------CCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 254 --------RQ--------------LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 254 --------~~--------------~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
|+ .+++.|+...|.+++++++ ++|||++|||+++.|++|+|++|||+|++||||+++
T Consensus 224 ~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~ 302 (368)
T 3vkj_A 224 NWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKS 302 (368)
T ss_dssp CHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred cccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHH
Confidence 43 3458889999999998874 699999999999999999999999999999999998
Q ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccceeec
Q 017781 312 LAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 354 (366)
Q Consensus 312 l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~l~~~ 354 (366)
+. .|+++|.++++.+.+||+.+|.++|+++++||++..++..
T Consensus 303 ~~-~G~~~v~~~l~~l~~eL~~~m~~~G~~~i~el~~~~l~~~ 344 (368)
T 3vkj_A 303 AI-EGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIVIL 344 (368)
T ss_dssp HH-HCHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCEEEC
T ss_pred Hh-cChHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCCEEec
Confidence 65 6899999999999999999999999999999999887754
No 10
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=100.00 E-value=1.4e-40 Score=324.99 Aligned_cols=271 Identities=24% Similarity=0.348 Sum_probs=219.4
Q ss_pred hHhcccceeeeccccC--CCCCCccceeEcCcccCCceEeccccccc-ccCChhhHHHHHHHHHcCCceecCCCCCCCHH
Q 017781 39 NRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQK-MAHPEGEYATARAASAAGTIMTLSSWSTSSVE 115 (366)
Q Consensus 39 N~~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iApm~~~~-l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e 115 (366)
++.+|++|.|+||+|+ +++++||+|+|+|.++++||++|||++.. ..++++|.+++++|+++|+++++|++++. ++
T Consensus 21 ~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~ 99 (349)
T 1p0k_A 21 RETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LK 99 (349)
T ss_dssp CCCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TT
T ss_pred ccCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-cc
Confidence 3678999999999998 77899999999999999999999995543 44466789999999999999999998654 22
Q ss_pred H---------HhccCC-CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCcccccccc
Q 017781 116 E---------VASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ 185 (366)
Q Consensus 116 ~---------i~~~~~-~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~ 185 (366)
+ +.+..+ .|.+.|+..+.+.+... +.++++|++++.++++||.. +.
T Consensus 100 ~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~~~---~~~~~~gad~i~i~~~~~~~----------~~----------- 155 (349)
T 1p0k_A 100 DPSERLSYEIVRKENPNGLIFANLGSEATAAQAK---EAVEMIGANALQIHLNVIQE----------IV----------- 155 (349)
T ss_dssp CHHHHHHHHHHHHHCSSSCEEEEEETTCCHHHHH---HHHHHTTCSEEEEEECTTTT----------C------------
T ss_pred CcccccceehhhhhCCCceeEEeecCCCCHHHHH---HHHHhcCCCeEEecccchhh----------hc-----------
Confidence 2 222233 57888987555655433 34667899999999998742 00
Q ss_pred ccccCCCccccchhhHHHhhhccCCCC--CHHHHHHHHHhcCCCEEEEec---cCHHH----HHcCCcEEEEcCCCc---
Q 017781 186 GLDLGKMDEANDSGLAAYVAGQIDRSL--SWKDVKWLQTITKLPILVKGV---LTAED----VQAGAAGIIVSNHGA--- 253 (366)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~i~~lr~~~~~pv~vK~v---~~~~d----~~aGad~I~vs~~gg--- 253 (366)
++..++.+ .++.++++|+.+++||++|++ .+.++ .++|+|+|+++||||
T Consensus 156 -------------------~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~ 216 (349)
T 1p0k_A 156 -------------------MPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNF 216 (349)
T ss_dssp --------------------------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC------
T ss_pred -------------------CCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcch
Confidence 00123344 357799999999999999987 67776 899999999999988
Q ss_pred ------cC-------CCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHH
Q 017781 254 ------RQ-------LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGV 320 (366)
Q Consensus 254 ------~~-------~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv 320 (366)
++ .++++++++.|.++++.+ +++|||++|||++++|+.|+|++|||+|+|||+|++.+.+.|++++
T Consensus 217 ~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~ 295 (349)
T 1p0k_A 217 SKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGL 295 (349)
T ss_dssp ---------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHH
T ss_pred hhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHH
Confidence 43 467889999999999877 4799999999999999999999999999999999999877889999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChhhhcccceeec
Q 017781 321 RRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 354 (366)
Q Consensus 321 ~~~~~~l~~el~~~m~~~G~~~l~el~~~~l~~~ 354 (366)
.++++.+.+||+.+|.++|+.+++|+++..++..
T Consensus 296 ~~~~~~~~~~l~~~m~~~G~~~i~el~~~~~~~~ 329 (349)
T 1p0k_A 296 LEEIQLILEELKLIMTVLGARTIADLQKAPLVIK 329 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCBHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHhhCCeecc
Confidence 9999999999999999999999999999988753
No 11
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=2.6e-42 Score=342.27 Aligned_cols=310 Identities=18% Similarity=0.236 Sum_probs=231.2
Q ss_pred HHhCCccchhhhcCCccchhhHHHhHhcccceeeecc-ccCCCCCCccceeEcCcccCCceEecccccccccCChhhHHH
Q 017781 15 KEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPR-ILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYAT 93 (366)
Q Consensus 15 ~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr-~l~~~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~l 93 (366)
+.+||+..|+|+.+|++++ ++|..+||+|.|+|+ .+++++++||+|+|+|+++++||++|||++ +.++ ++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~g--~~~~----~~ 83 (393)
T 2qr6_A 13 ENLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSDA--LASP----EF 83 (393)
T ss_dssp -CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCTT--TCCH----HH
T ss_pred ccccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCCC--cccH----HH
Confidence 4578999999999999999 469999999999998 888999999999999999999999999984 3443 79
Q ss_pred HHHHHHcCCceecCC--------CCCCCHHHHhccCC-------CceEEEeeecC-CHHHHHHHHHHHHHcCCCEEEEec
Q 017781 94 ARAASAAGTIMTLSS--------WSTSSVEEVASTGP-------GIRFFQLYVYK-DRNVVAQLVRRAERAGFKAIALTV 157 (366)
Q Consensus 94 a~aa~~~G~~~~vs~--------~~~~~~e~i~~~~~-------~~~~~Qly~~~-d~~~~~~~l~ra~~~G~~ai~vtv 157 (366)
|+++++.|.++++++ ..+.++|++++..+ .+.|+|+|... |++...+++++++++|+..++ .+
T Consensus 84 a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~-~v 162 (393)
T 2qr6_A 84 VIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAV-RV 162 (393)
T ss_dssp HHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEE-EE
T ss_pred HHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEE-Ee
Confidence 999999999999986 22235566665432 35799998655 999999999999999988765 22
Q ss_pred CCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHH
Q 017781 158 DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAE 237 (366)
Q Consensus 158 d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~ 237 (366)
. +.+..+....+.- .+...-.+. ... ..+++ ..+..+|+.++|+++.+++||++|++.+++
T Consensus 163 ~----~~~~~e~a~~~~~-agad~i~i~---~~~-------~~~~~----~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e 223 (393)
T 2qr6_A 163 S----PQNVREIAPIVIK-AGADLLVIQ---GTL-------ISAEH----VNTGGEALNLKEFIGSLDVPVIAGGVNDYT 223 (393)
T ss_dssp C----TTTHHHHHHHHHH-TTCSEEEEE---CSS-------CCSSC----CCC-----CHHHHHHHCSSCEEEECCCSHH
T ss_pred C----CccHHHHHHHHHH-CCCCEEEEe---CCc-------ccccc----CCCcccHHHHHHHHHhcCCCEEECCcCCHH
Confidence 2 2344443333210 000000000 000 00011 123347888999999999999999999998
Q ss_pred H----HHcCCcEEEEcC--CCccCCC-CCcchHHHHHHHHHH-------cCCC-ceEEEecCCCCHHHHHHHHHhCcCEE
Q 017781 238 D----VQAGAAGIIVSN--HGARQLD-YVPATIMALEEVVKA-------TQGR-IPVFLDGGVRRGTDVFKALALGASGI 302 (366)
Q Consensus 238 d----~~aGad~I~vs~--~gg~~~~-~~~~~~~~l~~i~~~-------~~~~-i~vi~~GGI~~~~dv~kalalGAd~V 302 (366)
+ .++|+|+|+|++ |++++.+ +++++++.|++++++ ++++ +|||++|||+++.|++|+|++|||+|
T Consensus 224 ~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V 303 (393)
T 2qr6_A 224 TALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAV 303 (393)
T ss_dssp HHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEE
Confidence 8 889999999987 5565544 478999999999887 5433 99999999999999999999999999
Q ss_pred EecHHH-----------HHHhhhcCH---HHH--------------HHHH----------HHHHHHHHHHHHHcCCCChh
Q 017781 303 FIGRPV-----------VYSLAAEGE---KGV--------------RRVL----------EMLREEFELAMALSGCRSLK 344 (366)
Q Consensus 303 ~igr~~-----------l~~l~~~G~---~gv--------------~~~~----------~~l~~el~~~m~~~G~~~l~ 344 (366)
++||+| +|++++.|. +|+ .+++ +.|++||+..|.++|+++++
T Consensus 304 ~iG~~~l~~~es~~~~~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i~ 383 (393)
T 2qr6_A 304 VLGSPLARAEEAAGKGYFWPAVAAHPRFPRGVVTESVDLDEAAPSLEQILHGPSTMPWGVENFEGGLKRALAKCGYTDLK 383 (393)
T ss_dssp EECGGGGGSTTCTTTTEECCGGGGCSSSCCCCCEECC----CCCCHHHHHHCCCSCTTSSSCHHHHHHHHHHHHTCSBHH
T ss_pred EECHHHHcCCCCCCceEEEecccCcccCCCccccccccccccchhHHHHhccchhHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 999996 455554432 333 2333 35689999999999999999
Q ss_pred hhcccceee
Q 017781 345 EITRDHIVT 353 (366)
Q Consensus 345 el~~~~l~~ 353 (366)
||++..++.
T Consensus 384 el~~~~~~~ 392 (393)
T 2qr6_A 384 SFQKVSLHV 392 (393)
T ss_dssp HHTTCCEEE
T ss_pred HHhhccEec
Confidence 999987754
No 12
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=100.00 E-value=2.2e-36 Score=293.76 Aligned_cols=262 Identities=18% Similarity=0.189 Sum_probs=185.9
Q ss_pred hhHHHhHhcccceeeeccc--cCCCCCCccceeEcCcccCCceEecccccccccCChhhHHHHHHHHHc-CCceecCCCC
Q 017781 34 WTLQENRNAFSRILFRPRI--LIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAA-GTIMTLSSWS 110 (366)
Q Consensus 34 ~t~~~N~~~f~~i~l~pr~--l~~~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~-G~~~~vs~~~ 110 (366)
+-...|..+||+|.|+||+ +.+++++||+|+|+|+++++||++|||++.+ +.++++++.+. |+.+...++.
T Consensus 7 ~~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s------~~~la~a~~~~gg~g~~~~~~~ 80 (336)
T 1ypf_A 7 HHHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTII------DERIATYLAENNYFYIMHRFQP 80 (336)
T ss_dssp -----CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTTC------CHHHHHHHHHTTCCCCCCCSSG
T ss_pred cccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCCC------hHHHHHHHHhCCCEEEecCCCC
Confidence 3456799999999999999 5789999999999999999999999998754 45677765554 4444443322
Q ss_pred CCCHHHHhcc--CCCceEEEeeecCCHHHHHHHHHHHHHcC--CCEEEEecCCCCCcchhHHHhhhcCCCCccccccccc
Q 017781 111 TSSVEEVAST--GPGIRFFQLYVYKDRNVVAQLVRRAERAG--FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQG 186 (366)
Q Consensus 111 ~~~~e~i~~~--~~~~~~~Qly~~~d~~~~~~~l~ra~~~G--~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~ 186 (366)
....+.+.+. ..-+...|+ +.+.+. .+.++.+.++| ++.+.+++.
T Consensus 81 ~~~~~~i~~~~~~g~~v~v~~--g~~~~~-~~~a~~~~~~g~~~~~i~i~~~---------------------------- 129 (336)
T 1ypf_A 81 EKRISFIRDMQSRGLIASISV--GVKEDE-YEFVQQLAAEHLTPEYITIDIA---------------------------- 129 (336)
T ss_dssp GGHHHHHHHHHHTTCCCEEEE--CCSHHH-HHHHHHHHHTTCCCSEEEEECS----------------------------
T ss_pred HHHHHHHHHHHhcCCeEEEeC--CCCHHH-HHHHHHHHhcCCCCCEEEEECC----------------------------
Confidence 1111111111 111334442 222322 23345555556 555544321
Q ss_pred cccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEe-ccCHHH----HHcCCcEEEEcCCCccCCC----
Q 017781 187 LDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKG-VLTAED----VQAGAAGIIVSNHGARQLD---- 257 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~-v~~~~d----~~aGad~I~vs~~gg~~~~---- 257 (366)
.+++...|+.|+++|+.++.|+++|+ +.+.++ .++|||+|+++||||++.+
T Consensus 130 --------------------~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~ 189 (336)
T 1ypf_A 130 --------------------HGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIK 189 (336)
T ss_dssp --------------------SCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHH
T ss_pred --------------------CCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccc
Confidence 01234578899999999977778888 888887 9999999999999998754
Q ss_pred --CCcc--hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH--------------------HHhh
Q 017781 258 --YVPA--TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLA 313 (366)
Q Consensus 258 --~~~~--~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l--------------------~~l~ 313 (366)
++.+ +++.|+++++++ ++|||++|||+++.|++|+|++|||+|++||+|+ |+++
T Consensus 190 ~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~ 267 (336)
T 1ypf_A 190 TGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSA 267 (336)
T ss_dssp HSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC--------------
T ss_pred cCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeeccc
Confidence 3445 789999999988 8999999999999999999999999999999999 8888
Q ss_pred hcCHHHHH-----------------HHHHHHHHHHHHHHHHcCCCChhhhcccceeec
Q 017781 314 AEGEKGVR-----------------RVLEMLREEFELAMALSGCRSLKEITRDHIVTE 354 (366)
Q Consensus 314 ~~G~~gv~-----------------~~~~~l~~el~~~m~~~G~~~l~el~~~~l~~~ 354 (366)
+.|++|+. ++++.+++||+..|.++|+++++||++..++..
T Consensus 268 ~~~~~g~~~~~~g~~~~~~~~g~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~~~ 325 (336)
T 1ypf_A 268 SEFQKGEKKNVEGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDSIRTVDYVVV 325 (336)
T ss_dssp ---------CTTSCCSSSSCCCCHHHHHHHHHHHHHHHHHHTTSSBGGGGGGCCEEEC
T ss_pred chhhccCccccccceeeecccccHHHHHHHHHHHHHHHHHHhCcccHHHhCcCCEEEE
Confidence 87887766 899999999999999999999999998876654
No 13
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=100.00 E-value=2.6e-35 Score=287.42 Aligned_cols=257 Identities=20% Similarity=0.218 Sum_probs=197.7
Q ss_pred hHHHhHhcccceeeeccccC-CC-CCCccceeEc-----CcccCCceEecccccccccCChhhHHHHHHHHHcCCceecC
Q 017781 35 TLQENRNAFSRILFRPRILI-DV-SKIDMNTTVL-----GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS 107 (366)
Q Consensus 35 t~~~N~~~f~~i~l~pr~l~-~~-~~vd~st~l~-----g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs 107 (366)
-+++|..+||+|.|+|+.+. ++ +++||+|+|+ +.+++.||++|||++. ++.++|.+++++|..++++
T Consensus 14 ~~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~------~~~~lA~Ava~~Gglg~i~ 87 (351)
T 2c6q_A 14 LVPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTV------GTFEMAKVLCKFSLFTAVH 87 (351)
T ss_dssp -----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTTT------SCHHHHHHHHHTTCEEECC
T ss_pred ccccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCCC------CcHHHHHHHHHCCCEEEEc
Confidence 36789999999999999986 67 7999999999 9999999999999853 4789999999999888886
Q ss_pred CCCCCCHHHHhcc---CCC---ceEEEeeecCCHHHHHHHHHHHHHc--CCCEEEEecCCCCCcchhHHHhhhcCCCCcc
Q 017781 108 SWSTSSVEEVAST---GPG---IRFFQLYVYKDRNVVAQLVRRAERA--GFKAIALTVDTPRLGRREADIKNRFTLPPFL 179 (366)
Q Consensus 108 ~~~~~~~e~i~~~---~~~---~~~~Qly~~~d~~~~~~~l~ra~~~--G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~ 179 (366)
. +.++|++.+. .|. .....+ +.+.+.. +.++.+.+. |++++.+++..
T Consensus 88 ~--~~s~e~~~~~i~~~p~~l~~v~~~~--g~~~~~~-~~~~~l~~~~~g~~~i~i~~~~-------------------- 142 (351)
T 2c6q_A 88 K--HYSLVQWQEFAGQNPDCLEHLAASS--GTGSSDF-EQLEQILEAIPQVKYICLDVAN-------------------- 142 (351)
T ss_dssp T--TCCHHHHHHHHHHCGGGCTTEEEEE--CSSHHHH-HHHHHHHHHCTTCCEEEEECSC--------------------
T ss_pred C--CCCHHHHHHHHhhCchhhheeEeec--CCChHHH-HHHHHHHhccCCCCEEEEEecC--------------------
Confidence 4 5677776543 221 122222 2233322 334444444 77776654321
Q ss_pred ccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCcc
Q 017781 180 TLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGAR 254 (366)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~ 254 (366)
.++...|+.|+++|+.+ ++||++|.+.+.++ .++|+|+|+|++++|.
T Consensus 143 ----------------------------g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~ 194 (351)
T 2c6q_A 143 ----------------------------GYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGS 194 (351)
T ss_dssp ----------------------------TTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCST
T ss_pred ----------------------------CCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCc
Confidence 01223578999999999 89999999999988 9999999999988763
Q ss_pred -----CC-CCCcchHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH------------------
Q 017781 255 -----QL-DYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV------------------ 309 (366)
Q Consensus 255 -----~~-~~~~~~~~~l~~i~~~~~~-~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l------------------ 309 (366)
+. .++.+++..|.++.+++.. ++|||++|||+++.|++|||++|||+|++||+|+
T Consensus 195 ~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k 274 (351)
T 2c6q_A 195 VCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYK 274 (351)
T ss_dssp TBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEE
T ss_pred CcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeee
Confidence 22 3467888889888876532 7999999999999999999999999999999997
Q ss_pred --HHhhhcC--------------HHH----------HHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 017781 310 --YSLAAEG--------------EKG----------VRRVLEMLREEFELAMALSGCRSLKEITRDH 350 (366)
Q Consensus 310 --~~l~~~G--------------~~g----------v~~~~~~l~~el~~~m~~~G~~~l~el~~~~ 350 (366)
|++++.| ++| |.++++.|..||+..|.++|+++++||++..
T Consensus 275 ~~~g~~~~~a~~~~~g~~~~~~~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~~ 341 (351)
T 2c6q_A 275 LFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRT 341 (351)
T ss_dssp EEECTTBHHHHHHHSSSCCTTCCCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHHC
T ss_pred eccccccHhhhhcccccccccccccceEEEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhCC
Confidence 6665443 367 9999999999999999999999999998663
No 14
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=100.00 E-value=3.6e-34 Score=278.78 Aligned_cols=250 Identities=18% Similarity=0.236 Sum_probs=204.3
Q ss_pred hcccceeeeccccCCCC--CCccc--eeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHH
Q 017781 41 NAFSRILFRPRILIDVS--KIDMN--TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE 116 (366)
Q Consensus 41 ~~f~~i~l~pr~l~~~~--~vd~s--t~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~ 116 (366)
.+||+|.|+|+.+.+++ ++|++ |+|+|.+++.||++||| ++.+|.++|++++++|.++++++. .++|+
T Consensus 8 ~~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM------~~vte~~lA~A~a~~Gg~gvi~~~--~s~ee 79 (361)
T 3r2g_A 8 ITFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANM------DTITESNMANFMHSKGAMGALHRF--MTIEE 79 (361)
T ss_dssp CCGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCS------TTTCSHHHHHHHHHTTCEEBCCSC--SCHHH
T ss_pred cccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCC------CCchHHHHHHHHHHcCCCEEEeCC--CCHHH
Confidence 47999999999998776 76654 59999999999999999 355799999999999999999864 78898
Q ss_pred HhccCCCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCcccc
Q 017781 117 VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN 196 (366)
Q Consensus 117 i~~~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 196 (366)
+.+......|+|.|...+++...+.++++.++|++.|.+ |++..
T Consensus 80 ~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~i--d~a~G---------------------------------- 123 (361)
T 3r2g_A 80 NIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCV--DVAHA---------------------------------- 123 (361)
T ss_dssp HHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEE--ECSCC----------------------------------
T ss_pred HHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEE--eCCCC----------------------------------
Confidence 876544456788887778888889999999999996655 43310
Q ss_pred chhhHHHhhhccCCCCCHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccCC------CCCcchHHH
Q 017781 197 DSGLAAYVAGQIDRSLSWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQL------DYVPATIMA 265 (366)
Q Consensus 197 ~~~~~~~~~~~~d~~~~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~------~~~~~~~~~ 265 (366)
.+...|+.|+++|+.+ ++||++|.+.++++ .++|+|+|+|++|+|++. ..+.+.++.
T Consensus 124 ------------~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~a 191 (361)
T 3r2g_A 124 ------------HAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTC 191 (361)
T ss_dssp ------------SSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHH
T ss_pred ------------CcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHH
Confidence 0112478899999998 78999999999988 999999999999988653 235678888
Q ss_pred HHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhh--------c----------------------
Q 017781 266 LEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA--------E---------------------- 315 (366)
Q Consensus 266 l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~--------~---------------------- 315 (366)
+.++++.+ . |||++|||+++.|++|||++|||+|++||+|+-...+ +
T Consensus 192 I~~~~~~~--~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~Gm~s~~~~~~~~~~ 268 (361)
T 3r2g_A 192 IQDCSRAD--R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQ 268 (361)
T ss_dssp HHHHTTSS--S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESCCHHHHHHHHHTTC
T ss_pred HHHHHHhC--C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEecCCCcchhhhhhcc
Confidence 88887655 3 9999999999999999999999999999998632110 0
Q ss_pred --------CH-------HHHHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 316 --------GE-------KGVRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 316 --------G~-------~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
|- ..+++++..|...|+..|.++|+.+|+||+..
T Consensus 269 ~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~~ 317 (361)
T 3r2g_A 269 MHEWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRK 317 (361)
T ss_dssp CSTTCCSCCCCEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHT
T ss_pred ccccccCCcceeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhC
Confidence 10 13789999999999999999999999999654
No 15
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.97 E-value=6.8e-31 Score=261.17 Aligned_cols=297 Identities=18% Similarity=0.223 Sum_probs=180.8
Q ss_pred HhcccceeeeccccC-CCCCCccceeEc-CcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHH
Q 017781 40 RNAFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV 117 (366)
Q Consensus 40 ~~~f~~i~l~pr~l~-~~~~vd~st~l~-g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i 117 (366)
..+||+|.|+|+.+. +++++||+|+|+ |.++++||++|||++++ +.+++.++++.|...+++ ++.++|++
T Consensus 9 ~~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~~~------~~ela~a~a~aGglg~i~--~~~s~e~~ 80 (404)
T 1eep_A 9 ALTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVT------ESQMAIAIAKEGGIGIIH--KNMSIEAQ 80 (404)
T ss_dssp CCCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTC------SHHHHHHHHHHTSEEEEC--SSSCHHHH
T ss_pred CCCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCCCC------CHHHHHHHHHCCCEEEEC--CCCCHHHH
Confidence 357999999999997 789999999999 99999999999998743 556777788888888886 45678877
Q ss_pred hccCCCceEEE----eeecCCHHHHH-HHHHHHHHc----CCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccc
Q 017781 118 ASTGPGIRFFQ----LYVYKDRNVVA-QLVRRAERA----GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLD 188 (366)
Q Consensus 118 ~~~~~~~~~~Q----ly~~~d~~~~~-~~l~ra~~~----G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~ 188 (366)
.+..+...+++ ++...+..... .++...... +.+.+..+.+.|.. .|..+-+..+ + .++....
T Consensus 81 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~----~---~~i~~~~ 152 (404)
T 1eep_A 81 RKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNA-CKDLNNKLRV----G---AAVSIDI 152 (404)
T ss_dssp HHHHHHHHTCC--------------------------------------CCTTC-CBCTTSCBCC----E---EEECSCT
T ss_pred HHHHHHHHhhccCCCceeccccccccccccccCCCCCHHHHHHHHHHhhhcchh-hhhcccCceE----E---EEeCCCh
Confidence 54322111221 22222211000 000000000 01111112222321 1110000000 0 0000000
Q ss_pred c-CCCccccchhhHHHh---hhccCCCCCHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccC----
Q 017781 189 L-GKMDEANDSGLAAYV---AGQIDRSLSWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQ---- 255 (366)
Q Consensus 189 ~-~~~~~~~~~~~~~~~---~~~~d~~~~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~---- 255 (366)
. ..............+ ....++...|+.++++|+.+ ++||+++++.+.++ .++|+|+|+++.++|..
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~ 232 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTR 232 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHH
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCcc
Confidence 0 000000000000000 01134455788999999999 89999999988887 89999999996544431
Q ss_pred --CCCCcchHHHHHHHHHHcC-CCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH--------------------HHh
Q 017781 256 --LDYVPATIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSL 312 (366)
Q Consensus 256 --~~~~~~~~~~l~~i~~~~~-~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l--------------------~~l 312 (366)
.+.+.+.++.+.++.+.+. .++|||++|||+++.|+.|++++|||+|++||+|+ +++
T Consensus 233 ~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~ 312 (404)
T 1eep_A 233 IVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGM 312 (404)
T ss_dssp HHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC----
T ss_pred ccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcchhhhCCeEEeecCCC
Confidence 1235567888888887654 37999999999999999999999999999999995 333
Q ss_pred hh-------------------------cCHHH-------HHHHHHHHHHHHHHHHHHcCCCChhhhccccee
Q 017781 313 AA-------------------------EGEKG-------VRRVLEMLREEFELAMALSGCRSLKEITRDHIV 352 (366)
Q Consensus 313 ~~-------------------------~G~~g-------v~~~~~~l~~el~~~m~~~G~~~l~el~~~~l~ 352 (366)
+. +|.++ |.++++.|.+||+..|.++|+++++||++..+.
T Consensus 313 ~~~g~~~~g~~~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~~l~~~~~~ 384 (404)
T 1eep_A 313 GSISAMKRGSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKF 384 (404)
T ss_dssp --------------------------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCE
T ss_pred CCHHHHhhccccchhcccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCcE
Confidence 22 22333 889999999999999999999999999987544
No 16
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.93 E-value=1.2e-24 Score=212.71 Aligned_cols=247 Identities=21% Similarity=0.288 Sum_probs=183.1
Q ss_pred hcccceeeeccccC--CCCCCccceeEc-CcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHH
Q 017781 41 NAFSRILFRPRILI--DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV 117 (366)
Q Consensus 41 ~~f~~i~l~pr~l~--~~~~vd~st~l~-g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i 117 (366)
..||++.|+|+ +. +.+++|++|+|. +..+..||+.|||++.+ +..+|.+.++.|...++.. +.+.+++
T Consensus 13 ~~fddv~l~p~-~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt------~~~lA~avA~~GGlgii~~--~~s~e~~ 83 (361)
T 3khj_A 13 LTFEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK--NMDMESQ 83 (361)
T ss_dssp CCGGGEEECCC-CBCCCGGGCCCCEESSSSCEESSSEEECSSTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHH
T ss_pred CCcceEEEECC-CCCCCHHHccCceecccccccCCCEEeecCCCCC------cHHHHHHHHHcCCCeEEec--CCCHHHH
Confidence 47999999998 44 457899999997 68999999999998653 6689998777776666643 4455544
Q ss_pred hc-------cCCCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccC
Q 017781 118 AS-------TGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (366)
Q Consensus 118 ~~-------~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~ 190 (366)
.+ ....+...++... + .+.++.+.++|++.++|+ ++.
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~-~----~e~a~~l~eaGad~I~ld--~a~----------------------------- 127 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVN-E----IERAKLLVEAGVDVIVLD--SAH----------------------------- 127 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTT-C----HHHHHHHHHTTCSEEEEC--CSC-----------------------------
T ss_pred HHHHHHHHhccCceEEEEeCCC-H----HHHHHHHHHcCcCeEEEe--CCC-----------------------------
Confidence 21 1224566676542 2 566778888999988764 221
Q ss_pred CCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccC------CCCCc
Q 017781 191 KMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQ------LDYVP 260 (366)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~------~~~~~ 260 (366)
.++....+.++++|+.+++||+++.+.+.++ .++|+|+|+++.++|.. ...+.
T Consensus 128 -----------------G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~ 190 (361)
T 3khj_A 128 -----------------GHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGV 190 (361)
T ss_dssp -----------------CSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCC
T ss_pred -----------------CCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCC
Confidence 0122234678999998899999999999887 99999999996554421 23456
Q ss_pred chHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH--------------------HHhhhc----
Q 017781 261 ATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAE---- 315 (366)
Q Consensus 261 ~~~~~l~~i~~~~~~-~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l--------------------~~l~~~---- 315 (366)
+.++.+.++++.... ++|||++|||+++.|+.|++++|||+|++|++|+ |+++..
T Consensus 191 p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~~~~~~g~~~k~y~gm~s~~a~~ 270 (361)
T 3khj_A 191 PQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMK 270 (361)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCEEEEETTEEEEEC----------
T ss_pred CcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcchhhcCCeEEEEeeccchHHHHh
Confidence 788888888665321 7999999999999999999999999999999884 232200
Q ss_pred ----------C-------HHH----------HHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 316 ----------G-------EKG----------VRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 316 ----------G-------~~g----------v~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
+ ++| +++++..+...|+..|.++|+.+++||+..
T Consensus 271 ~~~~~~y~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~gl~~~~~~~g~~~~~~~~~~ 331 (361)
T 3khj_A 271 SGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 331 (361)
T ss_dssp -----------------------CEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred ccchhhhhcccccccccCCCccEEeCCCCCCHHHHHHHHHHHHHHhhhhcCCccHHHHHhC
Confidence 1 122 778899999999999999999999999754
No 17
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.93 E-value=2e-24 Score=207.46 Aligned_cols=238 Identities=18% Similarity=0.181 Sum_probs=178.5
Q ss_pred CccceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCC-C--------------------------C
Q 017781 59 IDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW-S--------------------------T 111 (366)
Q Consensus 59 vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~-~--------------------------~ 111 (366)
+||+++++|+++++||++||+.. +.+....+.+.+.|+++++... + +
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~~------~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGVL------CSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTSS------CSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCCC------CCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 58999999999999999998532 1244567778999999865422 1 1
Q ss_pred CCHH----HHhcc-C--CCceEEEeeecCCHHHHHHHHHHHHHcCCC---EEEEecCCCCCcchhHHHhhhcCCCCcccc
Q 017781 112 SSVE----EVAST-G--PGIRFFQLYVYKDRNVVAQLVRRAERAGFK---AIALTVDTPRLGRREADIKNRFTLPPFLTL 181 (366)
Q Consensus 112 ~~~e----~i~~~-~--~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~---ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~ 181 (366)
...+ ++.+. . ..+.+.|+. ..+.+...+.+++++++|++ ++.+|+.||.. .+.++
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g~~~------------- 140 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PGKPQ------------- 140 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TTCCC-------------
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CCchh-------------
Confidence 1122 23221 1 257888886 46778888899999999999 89999999864 11000
Q ss_pred ccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccC--HHH--------HHcC-CcEEEEcC
Q 017781 182 KNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLT--AED--------VQAG-AAGIIVSN 250 (366)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~--~~d--------~~aG-ad~I~vs~ 250 (366)
+ . .++...++.++++|+.+++||++|...+ .++ .++| +|+|+++|
T Consensus 141 ---------------------~-g--~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 141 ---------------------V-A--YDFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVN 196 (314)
T ss_dssp ---------------------G-G--GSHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECC
T ss_pred ---------------------h-c--CCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeC
Confidence 0 0 1333357789999999999999998753 333 7899 99999999
Q ss_pred CCcc--CCC-----------------CC----cchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHH
Q 017781 251 HGAR--QLD-----------------YV----PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 251 ~gg~--~~~-----------------~~----~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~ 307 (366)
+.++ ..+ .+ +..++.+.++++.+ +++|||++|||++++|+.++|++|||+|++||+
T Consensus 197 ~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~ 275 (314)
T 2e6f_A 197 SVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTA 275 (314)
T ss_dssp CEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHH
T ss_pred CCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchh
Confidence 7631 010 12 22467888888887 589999999999999999999999999999999
Q ss_pred HHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 017781 308 VVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 350 (366)
Q Consensus 308 ~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~ 350 (366)
+++. |+ .+++.++++|+.+|...|+++++|+++..
T Consensus 276 ~l~~----~p----~~~~~i~~~l~~~~~~~g~~~i~~~~g~~ 310 (314)
T 2e6f_A 276 LQEE----GP----GIFTRLEDELLEIMARKGYRTLEEFRGRV 310 (314)
T ss_dssp HHHH----CT----THHHHHHHHHHHHHHHHTCCSSTTTTTCC
T ss_pred hHhc----Cc----HHHHHHHHHHHHHHHHcCCCCHHHHhchH
Confidence 9872 44 37788999999999999999999998764
No 18
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.92 E-value=3.8e-24 Score=205.24 Aligned_cols=237 Identities=19% Similarity=0.189 Sum_probs=178.4
Q ss_pred cceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCC-C------C--------------------
Q 017781 61 MNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWST-S------S-------------------- 113 (366)
Q Consensus 61 ~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~-~------~-------------------- 113 (366)
++++++|.++++||++||... +.+.+..+.+.+.|+++++....+ . .
T Consensus 2 l~~~i~g~~l~npv~~Aag~~------~~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGVH------CMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECTTSS------CSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECCCCC------CCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 689999999999999997321 235677888999999988743321 1 0
Q ss_pred HH----HHhc---cC--CCceEEEeeecCCHHHHHHHHHHHHHcCCC-EEEEecCCCCCcchhHHHhhhcCCCCcccccc
Q 017781 114 VE----EVAS---TG--PGIRFFQLYVYKDRNVVAQLVRRAERAGFK-AIALTVDTPRLGRREADIKNRFTLPPFLTLKN 183 (366)
Q Consensus 114 ~e----~i~~---~~--~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~-ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~ 183 (366)
.+ ++.. .. ..|.+.|+. ..+.+...+.+++++++|++ ++.+++.||.. .+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~-~g~~---------------- 137 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNV-PGEP---------------- 137 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS-SSCC----------------
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC-CCcc----------------
Confidence 22 2221 12 356788886 46778888999999999999 99999999864 1100
Q ss_pred ccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccC--HHH--------HHcCCcEEEEcCCCc
Q 017781 184 FQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLT--AED--------VQAGAAGIIVSNHGA 253 (366)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~--~~d--------~~aGad~I~vs~~gg 253 (366)
.+ . .++...++.++++|+.+++||++|...+ .++ .++|+|+|+++|+.+
T Consensus 138 ------------------~~-g--~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~ 196 (311)
T 1jub_A 138 ------------------QL-A--YDFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIG 196 (311)
T ss_dssp ------------------CG-G--GCHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEE
T ss_pred ------------------cc-c--CCHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCC
Confidence 00 0 1333457889999999999999998753 222 788999999999752
Q ss_pred --cCCC-----------------CCc----chHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 254 --RQLD-----------------YVP----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 254 --~~~~-----------------~~~----~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.+.+ .++ ..++.+.++++.+++++|||++|||++++|+.++|++|||+|++||++++
T Consensus 197 ~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 197 NGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp EEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred cCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 1111 022 24677888888776689999999999999999999999999999999997
Q ss_pred HhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 017781 311 SLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 350 (366)
Q Consensus 311 ~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~ 350 (366)
. |+ .+++.++++|+.+|...|+++++|+++..
T Consensus 277 ~----~p----~~~~~i~~~l~~~l~~~g~~si~e~~g~~ 308 (311)
T 1jub_A 277 E----GP----AIFDRIIKELEEIMNQKGYQSIADFHGKL 308 (311)
T ss_dssp H----CT----HHHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred c----Cc----HHHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 2 44 37788999999999999999999998753
No 19
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.92 E-value=2e-24 Score=237.26 Aligned_cols=306 Identities=18% Similarity=0.175 Sum_probs=206.2
Q ss_pred ChHHHHHHHHHhCCccchhhhcCCccchhhHHHhHhcccceeeeccccC--CCCCCccceeEcCcccCCceEeccccccc
Q 017781 6 NVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQK 83 (366)
Q Consensus 6 ~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iApm~~~~ 83 (366)
++..+++.|+..- ...|.-+. +.+-.+....|+++.+.+..+. +++++|+++ .+..||+++||+++.
T Consensus 794 ~i~~l~~~~~~g~-~~~~~~~~-----~~~~~~~~~~~~dl~~~~~~l~~i~~~ev~~~~-----~I~~Pf~isaMS~Ga 862 (1479)
T 1ea0_A 794 VIHTLQQAVTNDS-YTTFKKYS-----EQVNKRPPMQLRDLLELRSTKAPVPVDEVESIT-----AIRKRFITPGMSMGA 862 (1479)
T ss_dssp HHHHHHHHHHHTC-HHHHHHHH-----HHHHTSCCCSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEEEEECCBTT
T ss_pred HHHHHHHHHHhCC-HHHHHHHH-----hhhccCCCCchhhhhhccCCCCCCCcccccccc-----cccCCeEecCccccc
Confidence 3566777777662 22332221 1111133457999999887775 456788776 678999999999875
Q ss_pred ccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhccC----CCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCC
Q 017781 84 MAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTG----PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT 159 (366)
Q Consensus 84 l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~----~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~ 159 (366)
+ .++.+.+||.+|+++|+.+.+++.. .+.++..... ....+.|+.. .........+ ..++++-|.+..
T Consensus 863 l-S~ea~~aLA~Aa~~aGg~~~tGeGg-~~pe~~~~~~~g~~~~~~IrQ~as-g~FGVn~~~l-----~~a~~ieIKigQ 934 (1479)
T 1ea0_A 863 L-SPEAHGTLNVAMNRIGAKSDSGEGG-EDPARFRPDKNGDNWNSAIKQVAS-GRFGVTAEYL-----NQCRELEIKVAQ 934 (1479)
T ss_dssp B-CHHHHHHHHHHHHHTTCEEECCTTC-CCGGGSSBCTTSCBCCCSEEEECS-SCTTCCHHHH-----TSCSEEEEECCC
T ss_pred c-CHHHHHHHHHHHHHcCCeeEcCCCc-cCHHHhhhccccchhhhhhhhhcC-CCCCcChHHc-----cccchHHHHHhc
Confidence 4 4678899999999999999998764 3444442110 1234677753 2222222222 356777777642
Q ss_pred CC---C-----cchhHHHhhhc-CCCCccccccccccccCCCccccchhhHHHhhhccCCCC-CH----HHHHHHHHhc-
Q 017781 160 PR---L-----GRREADIKNRF-TLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL-SW----KDVKWLQTIT- 224 (366)
Q Consensus 160 p~---~-----g~r~~d~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~----~~i~~lr~~~- 224 (366)
.. . +.+..+..... .++.++ ..+++..++++ ++ +.|+++|+.+
T Consensus 935 GAKpG~GG~Lp~~kv~~~IA~~R~~~~Gv----------------------~lisP~~~~d~~s~edl~~~I~~Lk~~~~ 992 (1479)
T 1ea0_A 935 GAKPGEGGQLPGFKVTEMIARLRHSTPGV----------------------MLISPPPHHDIYSIEDLAQLIYDLKQINP 992 (1479)
T ss_dssp TTSTTTCCEECGGGCCHHHHHHHTCCTTC----------------------CEECCSSCTTCSSHHHHHHHHHHHHHHCT
T ss_pred cCCCCcCCCCCHHHHHHHHHHHcCCCCCC----------------------CccCCCCCcCcCCHHHHHHHHHHHHHhCC
Confidence 11 1 11111100000 111111 11122223332 34 4589999998
Q ss_pred CCCEEEEeccC---HHH----HHcCCcEEEEcCCCccC--------CCCCcchHHHHHHHHHHc-----CCCceEEEecC
Q 017781 225 KLPILVKGVLT---AED----VQAGAAGIIVSNHGARQ--------LDYVPATIMALEEVVKAT-----QGRIPVFLDGG 284 (366)
Q Consensus 225 ~~pv~vK~v~~---~~d----~~aGad~I~vs~~gg~~--------~~~~~~~~~~l~~i~~~~-----~~~i~vi~~GG 284 (366)
++||++|++.+ .++ .++|||+|+|+||+|.. .+++.|+...|+++.+++ ++++|||++||
T Consensus 993 ~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGG 1072 (1479)
T 1ea0_A 993 DAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGG 1072 (1479)
T ss_dssp TCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESS
T ss_pred CCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECC
Confidence 88999999863 222 89999999999995432 246778889999998875 35799999999
Q ss_pred CCCHHHHHHHHHhCcCEEEecHHHHHHhhh---------------------------cCHHHHHHHHHHHHHHHHHHHHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRPVVYSLAA---------------------------EGEKGVRRVLEMLREEFELAMAL 337 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~~l~~l~~---------------------------~G~~gv~~~~~~l~~el~~~m~~ 337 (366)
|+++.|++|||++||++|++||+||++++| +|+++|.++++.+.+||+.+|..
T Consensus 1073 IrtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~~~gg~e~V~n~l~~l~~ELr~~Ma~ 1152 (1479)
T 1ea0_A 1073 LKTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAG 1152 (1479)
T ss_dssp CCSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGSCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHHhhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998754 36899999999999999999999
Q ss_pred cCCCChhhhcc-ccee
Q 017781 338 SGCRSLKEITR-DHIV 352 (366)
Q Consensus 338 ~G~~~l~el~~-~~l~ 352 (366)
+|+++++||.+ ..+.
T Consensus 1153 lG~~si~eL~g~~~ll 1168 (1479)
T 1ea0_A 1153 LGFRSLNEVIGRTDLL 1168 (1479)
T ss_dssp HTCSCSGGGTTCGGGE
T ss_pred hCCCCHHHHhCchhee
Confidence 99999999943 3443
No 20
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.92 E-value=6.1e-24 Score=233.20 Aligned_cols=252 Identities=21% Similarity=0.278 Sum_probs=190.8
Q ss_pred eeccccCCCCCCccceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceec-CCCC-------CC-------
Q 017781 48 FRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWS-------TS------- 112 (366)
Q Consensus 48 l~pr~l~~~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v-s~~~-------~~------- 112 (366)
-.|.....++++|++++++|.++++||++|||++. .+.++++.+.+.|.++++ .+.+ +.
T Consensus 520 ~~p~~~~ev~~v~ls~~~~G~~~~nPv~lAa~~~~------~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~ 593 (1025)
T 1gte_A 520 ELPLFYTPVDLVDISVEMAGLKFINPFGLASAAPT------TSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRG 593 (1025)
T ss_dssp CBCCCCCGGGGCCCCEEETTEEESSSEEECSSGGG------SSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEEC
T ss_pred CccccccccccccceeeeccccccCcccccCCCCC------CCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEec
Confidence 33443446789999999999999999999999764 367788889999998886 2111 10
Q ss_pred -----------------------C-------HHHHhccCC-CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCC
Q 017781 113 -----------------------S-------VEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (366)
Q Consensus 113 -----------------------~-------~e~i~~~~~-~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~ 161 (366)
. ++++.+..+ .+.++|++...+.+...+.+++++++|+++|.||++||.
T Consensus 594 ~~~g~~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~ 673 (1025)
T 1gte_A 594 TTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPH 673 (1025)
T ss_dssp CTTCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cccccccCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 0 123344344 678999987788999999999999999999999999986
Q ss_pred CcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH---
Q 017781 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED--- 238 (366)
Q Consensus 162 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d--- 238 (366)
. .+.++ + +..++ .++.+.++.++++|+.+++||++|...+.++
T Consensus 674 ~-~~~~~----~---------------------------G~~~~--~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~ 719 (1025)
T 1gte_A 674 G-MGERG----M---------------------------GLACG--QDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVS 719 (1025)
T ss_dssp C-CC------------------------------------SBGG--GCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHH
T ss_pred C-CCCCC----c---------------------------ccccc--cCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHH
Confidence 3 11100 0 00011 2455678899999999999999999865432
Q ss_pred -----HHcCCcEEEEcCC--------------------CccCCC--CCcch----HHHHHHHHHHcCCCceEEEecCCCC
Q 017781 239 -----VQAGAAGIIVSNH--------------------GARQLD--YVPAT----IMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 239 -----~~aGad~I~vs~~--------------------gg~~~~--~~~~~----~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
.++|+|+|+++|+ |.+... .+++. ++.+.++++.+ +++|||++|||++
T Consensus 720 ~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~-~~ipvi~~GGI~s 798 (1025)
T 1gte_A 720 IARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL-PGFPILATGGIDS 798 (1025)
T ss_dssp HHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS-TTCCEEEESSCCS
T ss_pred HHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc-CCCCEEEecCcCC
Confidence 7999999999874 221111 13333 46788888887 4699999999999
Q ss_pred HHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcc
Q 017781 288 GTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 348 (366)
Q Consensus 288 ~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~ 348 (366)
++|+.++|++|||+|+|||++++. +. .+++.+.+||+.+|...|+.+++++.+
T Consensus 799 ~~da~~~l~~Ga~~v~vg~~~l~~----~~----~~~~~~~~~l~~~l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 799 AESGLQFLHSGASVLQVCSAVQNQ----DF----TVIQDYCTGLKALLYLKSIEELQGWDG 851 (1025)
T ss_dssp HHHHHHHHHTTCSEEEESHHHHTS----CT----THHHHHHHHHHHHHHHTTCGGGTTSBT
T ss_pred HHHHHHHHHcCCCEEEEeeccccC----Cc----cHHHHHHHHHHHHHHHcCCCCHHHHhC
Confidence 999999999999999999999862 33 467789999999999999999999987
No 21
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.92 E-value=1.3e-23 Score=207.15 Aligned_cols=252 Identities=21% Similarity=0.279 Sum_probs=169.7
Q ss_pred cccceeeecccc-CCCCCCccceeEc-CcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhc
Q 017781 42 AFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS 119 (366)
Q Consensus 42 ~f~~i~l~pr~l-~~~~~vd~st~l~-g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~ 119 (366)
.|||+.|+|..- ...+++|++|.|. ...+..||+.|||++.+ +..||.+.++.|...+++. +.++|++++
T Consensus 11 t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~Vs------~~~lA~Ava~aGGlGvi~~--~~~~e~~~~ 82 (400)
T 3ffs_A 11 TFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK--NMDMESQVN 82 (400)
T ss_dssp CGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTTC------SSHHHHHHHTTTCEEEECS--SSCHHHHHH
T ss_pred CceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCcC------cHHHHHHHHHCCCEEEeCC--CCCHHHHHH
Confidence 699999999754 3557899999986 57889999999997543 5589999999999999974 566765542
Q ss_pred c-------CC----CceE--EEeeec-CCHHHH------------------------------HHHHHHHHHcCCCEEEE
Q 017781 120 T-------GP----GIRF--FQLYVY-KDRNVV------------------------------AQLVRRAERAGFKAIAL 155 (366)
Q Consensus 120 ~-------~~----~~~~--~Qly~~-~d~~~~------------------------------~~~l~ra~~~G~~ai~v 155 (366)
. .. .|+- .+|++. .+.+.. .+.++.+.++|++.+++
T Consensus 83 ~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~~e~~~~lveaGvdvIvl 162 (400)
T 3ffs_A 83 EVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNNIDAYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIVL 162 (400)
T ss_dssp HHHHHHCCC-------------------------------CCTTCCBCTTSSBCCEEEECCC-CHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhhccCcccCCCCccccccCCCCCHHHHHHHHHhhhCcchhhccccceeEEeecCCCHHHHHHHHHHcCCCEEEE
Confidence 1 11 1221 233210 000000 11111222222222211
Q ss_pred ecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccC
Q 017781 156 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLT 235 (366)
Q Consensus 156 tvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~ 235 (366)
+. ..+++...++.|+++|+.+++||+++.+.+
T Consensus 163 dt------------------------------------------------a~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t 194 (400)
T 3ffs_A 163 DS------------------------------------------------AHGHSLNIIRTLKEIKSKMNIDVIVGNVVT 194 (400)
T ss_dssp CC------------------------------------------------SCCSBHHHHHHHHHHHTTCCCEEEEEEECS
T ss_pred eC------------------------------------------------CCCCcccHHHHHHHHHhcCCCeEEEeecCC
Confidence 10 001222235679999998899999999999
Q ss_pred HHH----HHcCCcEEEEcCCCcc-----C-CCCCcchHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHhCcCEEEe
Q 017781 236 AED----VQAGAAGIIVSNHGAR-----Q-LDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFI 304 (366)
Q Consensus 236 ~~d----~~aGad~I~vs~~gg~-----~-~~~~~~~~~~l~~i~~~~~~-~i~vi~~GGI~~~~dv~kalalGAd~V~i 304 (366)
.++ .++|||+|++++.+|. . ...+.+.+.++.++++++.. ++|||++|||+++.|+.|+|++|||+|++
T Consensus 195 ~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~v 274 (400)
T 3ffs_A 195 EEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMI 274 (400)
T ss_dssp HHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 887 9999999999543332 1 13456889999999887542 79999999999999999999999999999
Q ss_pred cHHHH--------------------HHhhhc--------------C-------HHH----------HHHHHHHHHHHHHH
Q 017781 305 GRPVV--------------------YSLAAE--------------G-------EKG----------VRRVLEMLREEFEL 333 (366)
Q Consensus 305 gr~~l--------------------~~l~~~--------------G-------~~g----------v~~~~~~l~~el~~ 333 (366)
|++|+ |+++.. + ++| +++++..|...|+.
T Consensus 275 Gt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s~~am~~~~~~ry~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~ 354 (400)
T 3ffs_A 275 GSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRS 354 (400)
T ss_dssp CGGGTTBTTSSCCEEESSSSEEEC-----------------------------------CEECCBCHHHHHHHHHHHHHH
T ss_pred ChHHhcCCCCCchhhhcCCeeeeeecCcchHHHHhccccchhhcccccccccCCCCcEEecCCCCCHHHHHHHHHHHHHH
Confidence 99984 333210 0 222 77889999999999
Q ss_pred HHHHcCCCChhhhccc
Q 017781 334 AMALSGCRSLKEITRD 349 (366)
Q Consensus 334 ~m~~~G~~~l~el~~~ 349 (366)
.|.++|+.+|+||+..
T Consensus 355 ~~~y~G~~~i~el~~~ 370 (400)
T 3ffs_A 355 CMGYLGSASIEELWKK 370 (400)
T ss_dssp HHHHTTCSSHHHHHHH
T ss_pred hhhhcCcccHHHHHhC
Confidence 9999999999999754
No 22
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.92 E-value=7.6e-24 Score=207.01 Aligned_cols=252 Identities=19% Similarity=0.247 Sum_probs=183.5
Q ss_pred hcccceeeecccc-CCCCCCccceeEc-CcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHh
Q 017781 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (366)
Q Consensus 41 ~~f~~i~l~pr~l-~~~~~vd~st~l~-g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~ 118 (366)
..||++.|+|..- .+.+++|++|+|. ...+..||+.|||+..+ +..+|.+.++.|...++.. +.+.+++.
T Consensus 14 ~~fddv~lvp~~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs------~~~lA~avA~aGGlg~i~~--~~s~e~~~ 85 (366)
T 4fo4_A 14 LTFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQA 85 (366)
T ss_dssp CCGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHHH
T ss_pred CCcceEEEECCCCCCChhhcccceecccccccCCCEEeCCCCCCC------hHHHHHHHHHcCCceEeec--CCCHHHHH
Confidence 3699999999733 2456899999997 68899999999997643 6789999888888777753 35565543
Q ss_pred cc----CC-CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCc
Q 017781 119 ST----GP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMD 193 (366)
Q Consensus 119 ~~----~~-~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~ 193 (366)
+. .. ++..+.+-...+. ...+.++.+.++|++.++|+. ..
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~~-~~~~~~~~lieaGvd~I~idt--a~-------------------------------- 130 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAAP-GNEERVKALVEAGVDVLLIDS--SH-------------------------------- 130 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSCT-TCHHHHHHHHHTTCSEEEEEC--SC--------------------------------
T ss_pred HHHHHHHhcCceeEEEEeccCh-hHHHHHHHHHhCCCCEEEEeC--CC--------------------------------
Confidence 21 11 2222333222221 234567788889999887742 10
Q ss_pred cccchhhHHHhhhccCCCCCHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccC------CCCCcch
Q 017781 194 EANDSGLAAYVAGQIDRSLSWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQ------LDYVPAT 262 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~------~~~~~~~ 262 (366)
.++....+.|+++|+.+ ++||+++.+.+.++ .++|||+|+++...|.. ..++.+.
T Consensus 131 --------------G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~ 196 (366)
T 4fo4_A 131 --------------GHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQ 196 (366)
T ss_dssp --------------TTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCH
T ss_pred --------------CCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccch
Confidence 01112345689999988 78999988999887 89999999995333321 1356788
Q ss_pred HHHHHHHHHHcC-CCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH--------------------hhh-----c-
Q 017781 263 IMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS--------------------LAA-----E- 315 (366)
Q Consensus 263 ~~~l~~i~~~~~-~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~--------------------l~~-----~- 315 (366)
++.|.++++++. .++|||++|||+++.|+.|+|++|||+|++|++|+.. ++. .
T Consensus 197 ~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~~~g~~~k~y~gm~s~~am~~~ 276 (366)
T 4fo4_A 197 ITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKG 276 (366)
T ss_dssp HHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHCC-
T ss_pred HHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhhhCCceeEEeeccccHHHHhcc
Confidence 899999887542 2799999999999999999999999999999998532 110 0
Q ss_pred --------C-------HH----------HHHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 316 --------G-------EK----------GVRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 316 --------G-------~~----------gv~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
+ ++ .+++++..|...|+..|.++|+.+|+||+..
T Consensus 277 ~~~ry~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~~~~~~~ 335 (366)
T 4fo4_A 277 SSDRYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 335 (366)
T ss_dssp --------------CCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cccchhccccccccccCCCcEEecCCCCCHHHHHHHHHHHHHHhhhccCcccHHHHHhC
Confidence 0 01 2778999999999999999999999999754
No 23
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.91 E-value=1.7e-23 Score=203.71 Aligned_cols=247 Identities=16% Similarity=0.105 Sum_probs=179.4
Q ss_pred eccccCCCCCCccceeEcCcccCCceEecccccccccCCh-hhHHHHHHHHHcCCceec-CCCC------C---------
Q 017781 49 RPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPE-GEYATARAASAAGTIMTL-SSWS------T--------- 111 (366)
Q Consensus 49 ~pr~l~~~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~-~e~~la~aa~~~G~~~~v-s~~~------~--------- 111 (366)
.|+.-..+++.|++++++|.+|++||++|+= ++ .+.+..+.+...|.++++ .|.. +
T Consensus 25 ~~~~~~~~~~~~L~~~~~Gl~~~NPv~lAAG-------~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~ 97 (354)
T 4ef8_A 25 TGGQQMGRGSMSLQVNLLNNTFANPFMNAAG-------VMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALP 97 (354)
T ss_dssp ---------CCCCCEEETTEEESSSEEECTT-------SSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEET
T ss_pred CchhhcCCCCCCcceEECCEECCCCCEeccC-------CCCCCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecc
Confidence 3455556788999999999999999999982 22 366788889999988764 2211 1
Q ss_pred -----------CCHH----HHhcc--C-CCceEEEeeecCCHHHHHHHHHHHH---HcCCCEEEEecCCCCCcchhHHHh
Q 017781 112 -----------SSVE----EVAST--G-PGIRFFQLYVYKDRNVVAQLVRRAE---RAGFKAIALTVDTPRLGRREADIK 170 (366)
Q Consensus 112 -----------~~~e----~i~~~--~-~~~~~~Qly~~~d~~~~~~~l~ra~---~~G~~ai~vtvd~p~~g~r~~d~~ 170 (366)
..++ ++.+. . ..|.++||. ..+.+.+.+.+++++ +.|+++|.||+.||..
T Consensus 98 ~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~-------- 168 (354)
T 4ef8_A 98 LGSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNV-------- 168 (354)
T ss_dssp TEEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS--------
T ss_pred hhhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC--------
Confidence 1222 23222 1 257889986 567888888888888 5799999999999963
Q ss_pred hhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCH--HH--------HH
Q 017781 171 NRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTA--ED--------VQ 240 (366)
Q Consensus 171 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~--~d--------~~ 240 (366)
|.+ + .++ .+++...+.++++|+.+++||+||...+. ++ .+
T Consensus 169 -----~gg---~--------------------~l~--~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~ 218 (354)
T 4ef8_A 169 -----PGK---P--------------------QVA--YDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNE 218 (354)
T ss_dssp -----TTS---C--------------------CGG--GSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHT
T ss_pred -----CCc---h--------------------hhc--cCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHh
Confidence 100 0 001 13444567899999999999999998643 22 47
Q ss_pred cC-CcEEEEcCCCc---------cC-------CCC---C----cchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHH
Q 017781 241 AG-AAGIIVSNHGA---------RQ-------LDY---V----PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 296 (366)
Q Consensus 241 aG-ad~I~vs~~gg---------~~-------~~~---~----~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kala 296 (366)
+| +|+|+++|+.+ +. ..+ | +..++.+.++++.+ +++|||++|||++++|+.+++.
T Consensus 219 ~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~-~~ipII~~GGI~s~~da~~~l~ 297 (354)
T 4ef8_A 219 FPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVL 297 (354)
T ss_dssp CTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESCCCSHHHHHHHHH
T ss_pred CCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhC-CCCCEEEECCcCCHHHHHHHHH
Confidence 87 99999988642 10 111 2 23578888888873 4799999999999999999999
Q ss_pred hCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 017781 297 LGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 350 (366)
Q Consensus 297 lGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~ 350 (366)
+|||+||+||++++. |+. +++.++++|+.+|...|+++++|+++..
T Consensus 298 aGAd~V~vgra~l~~----GP~----~~~~i~~~l~~~m~~~G~~si~el~G~~ 343 (354)
T 4ef8_A 298 AGASMVQVGTALQEE----GPS----IFERLTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp HTEEEEEECHHHHHH----CTT----HHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred cCCCEEEEhHHHHHh----CHH----HHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 999999999999874 553 6778999999999999999999999874
No 24
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.91 E-value=3.6e-23 Score=227.74 Aligned_cols=279 Identities=18% Similarity=0.146 Sum_probs=191.0
Q ss_pred hHhcccceeeeccccC--CCCCCccceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHH
Q 017781 39 NRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE 116 (366)
Q Consensus 39 N~~~f~~i~l~pr~l~--~~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~ 116 (366)
....|+++...+..+. +++++|+++ .+..||+++||+++++ .++.+.+||.+|+++|+.+.+++.. .+.+.
T Consensus 838 ~~~~~r~l~~~~~~~~~i~~~ev~~~~-----~I~~Pfii~aMS~Gsl-S~ea~~aLA~Aas~aGg~~~tGeGg-~~pe~ 910 (1520)
T 1ofd_A 838 PVTALRDLLDFNADQPAISLEEVESVE-----SIVKRFCTGGMSLGAL-SREAHETLAIAMNRLGAKSNSGEGG-EDVVR 910 (1520)
T ss_dssp CSCSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEECCCBCTTTS-CHHHHHHHHHHHHHHTCBCEECTTC-CCGGG
T ss_pred CCcchhhhccccCCCCCCCchhhcccc-----cccCceEecCcCcccc-cHHHHHHHHHHHHHcCCceEeCCCC-CCHHH
Confidence 3357888888877664 345677665 5689999999998754 3567899999999999999998764 34444
Q ss_pred Hh-----------ccCC-----------CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCC---Cc-c----hh
Q 017781 117 VA-----------STGP-----------GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR---LG-R----RE 166 (366)
Q Consensus 117 i~-----------~~~~-----------~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~---~g-~----r~ 166 (366)
.. +..| .....|+-. .......+.+. .++.+.+.+..-. .| . +.
T Consensus 911 ~~~eir~~~~~~~~~~p~~~~~~nG~~~~~~I~Ql~s-g~FGVn~~~l~-----~ad~IeIKi~QGAKpG~GG~Lp~~kV 984 (1520)
T 1ofd_A 911 YLTLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIAS-GRFGVTPEYLM-----SGKQLEIKMAQGAKPGEGGQLPGKKV 984 (1520)
T ss_dssp GSCCCCCCTTSCCTTSTTCCSCCTTCCCCCSEEEECT-TCTTCCHHHHH-----HCSEEEEECCCTTSTTSCCEECGGGC
T ss_pred HHhhhccccccccccccccccccCcchHHHHHHHhcC-CCCccChhhcc-----chHHHHHHHhccCCCCCCCCCCHHHH
Confidence 32 0011 135667632 11122111221 2566777653211 10 0 00
Q ss_pred HHHhh-hcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC-CH----HHHHHHHHhc-CCCEEEEeccC---H
Q 017781 167 ADIKN-RFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL-SW----KDVKWLQTIT-KLPILVKGVLT---A 236 (366)
Q Consensus 167 ~d~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~----~~i~~lr~~~-~~pv~vK~v~~---~ 236 (366)
.+... -...|+++ ..+++..++++ ++ +.|+++|+.+ ++||++|.+.+ .
T Consensus 985 ~~~iA~~R~~~~Gv----------------------~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~ 1042 (1520)
T 1ofd_A 985 SEYIAMLRRSKPGV----------------------TLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIG 1042 (1520)
T ss_dssp CHHHHHHHTSCTTC----------------------CEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHH
T ss_pred HHHHHHHcCCCCCC----------------------CeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChH
Confidence 00000 00011111 11122223333 33 4689999998 89999999853 2
Q ss_pred HH----HHcCCcEEEEcCCCccC--------CCCCcchHHHHHHHHHHc-----CCCceEEEecCCCCHHHHHHHHHhCc
Q 017781 237 ED----VQAGAAGIIVSNHGARQ--------LDYVPATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGA 299 (366)
Q Consensus 237 ~d----~~aGad~I~vs~~gg~~--------~~~~~~~~~~l~~i~~~~-----~~~i~vi~~GGI~~~~dv~kalalGA 299 (366)
++ .++|||+|+|+||+|.+ .+++.|+...|+++.+++ ++++|||++|||+++.|++|||+|||
T Consensus 1043 ~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLGA 1122 (1520)
T 1ofd_A 1043 TIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMGA 1122 (1520)
T ss_dssp HHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcCC
Confidence 22 89999999999996432 246778889999998865 34799999999999999999999999
Q ss_pred CEEEecHHHHHHhhh---------------------------cCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhc-ccce
Q 017781 300 SGIFIGRPVVYSLAA---------------------------EGEKGVRRVLEMLREEFELAMALSGCRSLKEIT-RDHI 351 (366)
Q Consensus 300 d~V~igr~~l~~l~~---------------------------~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~-~~~l 351 (366)
++|++||+||++++| +|+++|.++++.+.+||+.+|..+|+++++||. +..+
T Consensus 1123 daV~iGTafL~algc~~~r~Ch~~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~gr~dl 1202 (1520)
T 1ofd_A 1123 EEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDIIGRTDL 1202 (1520)
T ss_dssp SEEECSHHHHHHTTCCCCCCGGGTCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTTTCGGG
T ss_pred CeeEEcHHHHHHHHHHHHHhccCCCCCceeEeeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhCcceE
Confidence 999999999998754 268999999999999999999999999999995 4444
Q ss_pred e
Q 017781 352 V 352 (366)
Q Consensus 352 ~ 352 (366)
.
T Consensus 1203 l 1203 (1520)
T 1ofd_A 1203 L 1203 (1520)
T ss_dssp E
T ss_pred E
Confidence 3
No 25
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.90 E-value=1.9e-22 Score=202.28 Aligned_cols=137 Identities=21% Similarity=0.347 Sum_probs=112.8
Q ss_pred CHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCcc------CCCCCcchHHHHHHHHHHcCC-CceEE
Q 017781 213 SWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGAR------QLDYVPATIMALEEVVKATQG-RIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~------~~~~~~~~~~~l~~i~~~~~~-~i~vi 280 (366)
..+.++++|+.+ ++||+...+.+.+. .++|||+|.|.-.+|. ....|.|.+.++.+++++... .+|||
T Consensus 309 v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvI 388 (556)
T 4af0_A 309 QIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCI 388 (556)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEE
T ss_pred HHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEE
Confidence 457799999988 78999999999876 8999999999876563 134578899999999887643 69999
Q ss_pred EecCCCCHHHHHHHHHhCcCEEEecHHHH--------------------HHhhhc-----C-------------------
Q 017781 281 LDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAE-----G------------------- 316 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalGAd~V~igr~~l--------------------~~l~~~-----G------------------- 316 (366)
+||||++..|++|||++|||+||+|+.|- |+++.. +
T Consensus 389 ADGGI~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe~~~~~G~~~K~YrGMgS~~Am~~~~~~~~~~~~~~~~~~~~s~ 468 (556)
T 4af0_A 389 ADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRGSASGKRSILGLDNAAT 468 (556)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHTTC------------CCSCSSE
T ss_pred ecCCcCcchHHHHHhhcCCCEEEEchhhccccCCCCcEEEECCEEEEeecccccHHHHHhcccCCcccccccccccccch
Confidence 99999999999999999999999999872 122110 0
Q ss_pred ------------HH----------HHHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 317 ------------EK----------GVRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 317 ------------~~----------gv~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
++ .+.+++..|...|+..|.++|+.+|+||+..
T Consensus 469 dRyfq~~~~~~v~EGveg~VpykG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~~ 523 (556)
T 4af0_A 469 ARYFSEADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHSC 523 (556)
T ss_dssp EECCCBSSSSCBCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred hhhcccccccccCCccEEeccCCCcHHHHHHHHHHHHHHhhhccCCCcHHHHHHh
Confidence 01 2789999999999999999999999999864
No 26
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.89 E-value=3.3e-22 Score=197.37 Aligned_cols=119 Identities=24% Similarity=0.315 Sum_probs=100.1
Q ss_pred CCC-EEEEeccCHH--H--------HHcCCcEEEEcCCCccCCC--------C---Cc----chHHHHHHHHHHcCCCce
Q 017781 225 KLP-ILVKGVLTAE--D--------VQAGAAGIIVSNHGARQLD--------Y---VP----ATIMALEEVVKATQGRIP 278 (366)
Q Consensus 225 ~~p-v~vK~v~~~~--d--------~~aGad~I~vs~~gg~~~~--------~---~~----~~~~~l~~i~~~~~~~i~ 278 (366)
++| |+||...+.+ + .++|+|+|+++|++..+.+ + |+ .+++.+.++++.+++++|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 689 9999986432 2 8999999999998764432 2 22 245789999998877899
Q ss_pred EEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccce
Q 017781 279 VFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 351 (366)
Q Consensus 279 vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~l 351 (366)
||++|||++++|+.++|++|||+|+|||++++. |+. ++..++++|+.+|...|+++++|+++...
T Consensus 348 IIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~----GP~----~~~~i~~~L~~~l~~~G~~si~e~~G~~~ 412 (415)
T 3i65_A 348 IIASGGIFSGLDALEKIEAGASVCQLYSCLVFN----GMK----SAVQIKRELNHLLYQRGYYNLKEAIGRKH 412 (415)
T ss_dssp EEECSSCCSHHHHHHHHHHTEEEEEESHHHHHH----GGG----HHHHHHHHHHHHHHHTTCSSSTTTTTTTC
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc----CHH----HHHHHHHHHHHHHHHcCCCCHHHHhChhc
Confidence 999999999999999999999999999999975 553 67789999999999999999999987643
No 27
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.89 E-value=1.6e-23 Score=201.87 Aligned_cols=239 Identities=20% Similarity=0.193 Sum_probs=175.0
Q ss_pred ccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCC------C---HHHHhccCCCceEEEeeecCCHHHHH
Q 017781 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS------S---VEEVASTGPGIRFFQLYVYKDRNVVA 139 (366)
Q Consensus 69 ~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~------~---~e~i~~~~~~~~~~Qly~~~d~~~~~ 139 (366)
++++||++|||++.+ +.++...+++.|..++++++.+. . .+.+......+.++||+ ..+++...
T Consensus 2 ~l~nri~~APM~~~t------~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~-g~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAGYT------DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF-GSEPNELS 74 (318)
T ss_dssp ---CEEEECCCTTTC------SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE-CSCHHHHH
T ss_pred ccCCCEEECCCCCCC------cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC-CCCHHHHH
Confidence 567999999998543 57899999999999888877432 1 12221112368999999 77899999
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHH
Q 017781 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKW 219 (366)
Q Consensus 140 ~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~ 219 (366)
+.+++++++ +++|.||++||....|. .++ +..+. .++.+.++.+++
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r~----~~~---------------------------G~~l~--~~~~~~~eiv~~ 120 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVVK----EGA---------------------------GGALL--KDLRHFRYIVRE 120 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHHH----TTC---------------------------GGGGG--SCHHHHHHHHHH
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcCC----CCc---------------------------ccchh--hCHHHHHHHHHH
Confidence 999999999 99999999999642221 111 00111 255678899999
Q ss_pred HHHhcCCCEEEEeccCH------HH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH
Q 017781 220 LQTITKLPILVKGVLTA------ED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 289 (366)
Q Consensus 220 lr~~~~~pv~vK~v~~~------~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~ 289 (366)
+++.+++||++|..... +. .++|+|+|+|++....+...+++.++.+.++++ ++|||++|||++++
T Consensus 121 v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~----~ipVi~~GgI~s~~ 196 (318)
T 1vhn_A 121 LRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK----RIPTFVSGDIFTPE 196 (318)
T ss_dssp HHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC----SSCEEEESSCCSHH
T ss_pred HHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc----CCeEEEECCcCCHH
Confidence 99999999999954321 11 899999999965322222245566666665553 79999999999999
Q ss_pred HHHHHHH-hCcCEEEecHHHHH-----Hhhhc----CH---HHHHHHHHHHHHHHHHHHHHcCCC-Chhhhccccee
Q 017781 290 DVFKALA-LGASGIFIGRPVVY-----SLAAE----GE---KGVRRVLEMLREEFELAMALSGCR-SLKEITRDHIV 352 (366)
Q Consensus 290 dv~kala-lGAd~V~igr~~l~-----~l~~~----G~---~gv~~~~~~l~~el~~~m~~~G~~-~l~el~~~~l~ 352 (366)
|+.++++ .|||+|++||+++. ..... |. .++.++++.+.++++..|.+.|.. .+.++++...+
T Consensus 197 da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 273 (318)
T 1vhn_A 197 DAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAG 273 (318)
T ss_dssp HHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHH
T ss_pred HHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 9999999 79999999998753 22211 43 467889999999999999999975 78888877544
No 28
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.89 E-value=1.1e-22 Score=194.48 Aligned_cols=239 Identities=18% Similarity=0.192 Sum_probs=169.4
Q ss_pred CCCCccceeEcCcccCCceEecc-cccccccCChhhHHHHHHHHHcCCceec-------------------------CCC
Q 017781 56 VSKIDMNTTVLGFKISMPIMIAP-TAMQKMAHPEGEYATARAASAAGTIMTL-------------------------SSW 109 (366)
Q Consensus 56 ~~~vd~st~l~g~~l~~Pi~iAp-m~~~~l~~~~~e~~la~aa~~~G~~~~v-------------------------s~~ 109 (366)
.+++|++++|+|+++++||++|| |.+.+ + .+.+.+.+.|+++++ +..
T Consensus 2 ~~~~~l~~~~~g~~l~npi~~aag~~~~~------~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~ 74 (311)
T 1ep3_A 2 TENNRLSVKLPGLDLKNPIIPASGCFGFG------E-EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAI 74 (311)
T ss_dssp CCCTTTCEEETTEEESSSEEECTTSSTTS------T-TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECC
T ss_pred CCCCccceEECCEECCCCcEECCCCCCCC------H-HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCccccccc
Confidence 36899999999999999999999 53322 1 233444344444443 111
Q ss_pred --CCCCHHHH--------hccC-CCceEEEeeecCCHHHHHHHHHHHHH-cCCCEEEEecCCCCCcchhHHHhhhcCCCC
Q 017781 110 --STSSVEEV--------ASTG-PGIRFFQLYVYKDRNVVAQLVRRAER-AGFKAIALTVDTPRLGRREADIKNRFTLPP 177 (366)
Q Consensus 110 --~~~~~e~i--------~~~~-~~~~~~Qly~~~d~~~~~~~l~ra~~-~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~ 177 (366)
.+...++. .+.. ..+.++|+.. .+.+...+.++++++ +|++++.+++.||..-.| +.
T Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~-~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g------~~---- 143 (311)
T 1ep3_A 75 GLQNPGLEVIMTEKLPWLNENFPELPIIANVAG-SEEADYVAVCAKIGDAANVKAIELNISCPNVKHG------GQ---- 143 (311)
T ss_dssp CCCBCCHHHHHHTHHHHHHHHCTTSCEEEEECC-SSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT------TE----
T ss_pred CCCCcCHHHHHHHHHHHHHhcCCCCcEEEEEcC-CCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc------hh----
Confidence 12233332 2213 3678999974 467778888888888 999999999998852100 00
Q ss_pred ccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCH---HH-----HHcCCcEEEEc
Q 017781 178 FLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTA---ED-----VQAGAAGIIVS 249 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~---~d-----~~aGad~I~vs 249 (366)
.+. .++.+..+.++++++.+++||++|...+. .+ .++|+|+|+++
T Consensus 144 ------------------------~~g---~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 144 ------------------------AFG---TDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp ------------------------EGG---GCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEEC
T ss_pred ------------------------hhc---CCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEe
Confidence 000 13344577899999998999999976432 22 89999999998
Q ss_pred CC-------CccCC---------CCCcc----hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 250 NH-------GARQL---------DYVPA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 250 ~~-------gg~~~---------~~~~~----~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l 309 (366)
|. ..+.. ..++. .++.+.++++.+ ++|||++|||++++|+.+++++|||+|++||+|+
T Consensus 197 ~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l 274 (311)
T 1ep3_A 197 NTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANF 274 (311)
T ss_dssp CCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHH
T ss_pred CCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 73 21100 11222 246777777766 7999999999999999999999999999999998
Q ss_pred HHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 017781 310 YSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 350 (366)
Q Consensus 310 ~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~ 350 (366)
. +++ +++.++++++.+|...|+++++|+++..
T Consensus 275 ~-----~p~----~~~~i~~~l~~~~~~~g~~~~~~~~g~~ 306 (311)
T 1ep3_A 275 A-----DPF----VCPKIIDKLPELMDQYRIESLESLIQEV 306 (311)
T ss_dssp H-----CTT----HHHHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred c-----CcH----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 7 333 5678889999999999999999998754
No 29
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.88 E-value=2e-21 Score=190.27 Aligned_cols=240 Identities=19% Similarity=0.218 Sum_probs=163.6
Q ss_pred CCCCccceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceec-CCCCCC----------------------
Q 017781 56 VSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWSTS---------------------- 112 (366)
Q Consensus 56 ~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v-s~~~~~---------------------- 112 (366)
.++.+++++++|.+|++||++|+ |.. .++ ...+...++|.++++ .|.+..
T Consensus 45 ~~~~~L~~~~~Gl~~~NPvglAa-G~~----~~~--~~~~~~~~~g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~ 117 (367)
T 3zwt_A 45 QDSDMLEVRVLGHKFRNPVGIAA-GFD----KHG--EAVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINR 117 (367)
T ss_dssp CCCGGGCEEETTEEESSSEEECT-TSS----TTS--SSHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEEC
T ss_pred CCCCCCcEEECCEEcCCCCEeCC-CcC----CCH--HHHHHHHhcCcCeEEeCCccCCCCCCCCCCeEEEecCccceeec
Confidence 56789999999999999999996 321 222 234445556887764 322110
Q ss_pred ------CH----HHHhcc---------CCCceEEEeeecC----CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHH
Q 017781 113 ------SV----EEVAST---------GPGIRFFQLYVYK----DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADI 169 (366)
Q Consensus 113 ------~~----e~i~~~---------~~~~~~~Qly~~~----d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~ 169 (366)
.+ +++.+. ...|..+||..++ +.+...+.++++.. +++++.||+.||...
T Consensus 118 ~G~~N~G~~~~~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~-~ad~ielNisCPn~~------ 190 (367)
T 3zwt_A 118 YGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGP-LADYLVVNVSSPNTA------ 190 (367)
T ss_dssp CCCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST------
T ss_pred cCCCCccHHHHHHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhh-hCCEEEEECCCCCCC------
Confidence 11 122210 1246788886432 23333333344332 478999999998531
Q ss_pred hhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHh-------cCCCEEEEeccCH--HH--
Q 017781 170 KNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTI-------TKLPILVKGVLTA--ED-- 238 (366)
Q Consensus 170 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~-------~~~pv~vK~v~~~--~d-- 238 (366)
+. + .+ .+++..-+.++.+++. +++||+||...+. ++
T Consensus 191 --G~--------~--------------------~l---~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~ 237 (367)
T 3zwt_A 191 --GL--------R--------------------SL---QGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKE 237 (367)
T ss_dssp --TG--------G--------------------GG---GSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHH
T ss_pred --Cc--------c--------------------cc---CCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHH
Confidence 00 0 00 1222223445666543 6899999988543 23
Q ss_pred ------HHcCCcEEEEcCCC-ccC---------CCC---Ccc----hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHH
Q 017781 239 ------VQAGAAGIIVSNHG-ARQ---------LDY---VPA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL 295 (366)
Q Consensus 239 ------~~aGad~I~vs~~g-g~~---------~~~---~~~----~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kal 295 (366)
.++|+|+|+++|+. ++. ..+ |++ +++.+.++++.+++++|||++|||++++|+.+++
T Consensus 238 ~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l 317 (367)
T 3zwt_A 238 DIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKI 317 (367)
T ss_dssp HHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHH
Confidence 89999999999975 331 112 222 4678999999987789999999999999999999
Q ss_pred HhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 017781 296 ALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 350 (366)
Q Consensus 296 alGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~ 350 (366)
++|||+|++||++++. |+. ++..+.++|+.+|...|+++++|+++..
T Consensus 318 ~~GAd~V~vgra~l~~----gP~----~~~~i~~~l~~~m~~~G~~~i~e~~G~~ 364 (367)
T 3zwt_A 318 RAGASLVQLYTALTFW----GPP----VVGKVKRELEALLKEQGFGGVTDAIGAD 364 (367)
T ss_dssp HHTCSEEEESHHHHHH----CTH----HHHHHHHHHHHHHHHTTCSSHHHHTTGG
T ss_pred HcCCCEEEECHHHHhc----CcH----HHHHHHHHHHHHHHHcCCCCHHHhhCcc
Confidence 9999999999999874 553 6778899999999999999999998764
No 30
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.88 E-value=1.4e-21 Score=189.74 Aligned_cols=238 Identities=16% Similarity=0.164 Sum_probs=174.5
Q ss_pred CCccceeEcCcccCCceEecccccccccCCh-hhHHHHHHHHHcCCceecC-CCCCC-----------------------
Q 017781 58 KIDMNTTVLGFKISMPIMIAPTAMQKMAHPE-GEYATARAASAAGTIMTLS-SWSTS----------------------- 112 (366)
Q Consensus 58 ~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~-~e~~la~aa~~~G~~~~vs-~~~~~----------------------- 112 (366)
..|++++++|.+|++||++|+ | ++ .+.+..+.+...|.++++. |.+..
T Consensus 35 m~~L~~~~~Gl~~~NPv~lAa-G------~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~ 107 (345)
T 3oix_A 35 MVSTHTTIGSFDFDNCLMNAA-G------VYCMTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGL 107 (345)
T ss_dssp -CCCCEEETTEEESCSEEECT-T------SSCSSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCC
T ss_pred cCCcCeEECCEECCCCCEEcC-C------CCCCCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCC
Confidence 378999999999999999996 2 22 2557888899999988753 22111
Q ss_pred ---CH----HHHhc----cCCCceEEEeeecCCHHHHHHHHHHHHHcCCC-EEEEecCCCCCcchhHHHhhhcCCCCccc
Q 017781 113 ---SV----EEVAS----TGPGIRFFQLYVYKDRNVVAQLVRRAERAGFK-AIALTVDTPRLGRREADIKNRFTLPPFLT 180 (366)
Q Consensus 113 ---~~----e~i~~----~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~-ai~vtvd~p~~g~r~~d~~~~~~~p~~~~ 180 (366)
.+ +++.+ ....|.++||. ..+.+...+.+++++++|+. +|.||+.||.. | +.
T Consensus 108 ~n~G~~~~~~~l~~~~~~~~~~pvivsI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~-------------~-G~- 171 (345)
T 3oix_A 108 PNLGINYYLDYVTELQKQPDSKNHFLSLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNV-------------P-GX- 171 (345)
T ss_dssp CBSCHHHHHHHHHHHHHSTTCCCCEEEEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCS-------------T-TC-
T ss_pred CChhHHHHHHHHHHHhhccCCCCEEEEec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCc-------------C-Cc-
Confidence 11 22322 12367889997 56788888899999989988 99999999963 1 00
Q ss_pred cccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccC--HHH-----HHcCCcEEEEcC---
Q 017781 181 LKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLT--AED-----VQAGAAGIIVSN--- 250 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~--~~d-----~~aGad~I~vs~--- 250 (366)
+ .++ .+++...+.++++|+.+++||+||...+ .++ .++|+|+|.+.|
T Consensus 172 -~--------------------~l~--~~~e~l~~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~n 228 (345)
T 3oix_A 172 -P--------------------QIA--YDFETTDQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCIN 228 (345)
T ss_dssp -C--------------------CGG--GCHHHHHHHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECC
T ss_pred -h--------------------hhc--CCHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeec
Confidence 0 000 1334456779999999999999998853 333 667776664322
Q ss_pred C--------Ccc-CC--------CCCcc----hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 251 H--------GAR-QL--------DYVPA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 251 ~--------gg~-~~--------~~~~~----~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l 309 (366)
. ..+ .+ .+|++ +++.+.++++.+++++|||++|||++++|+.++|++|||+|+|||+|+
T Consensus 229 t~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~ 308 (345)
T 3oix_A 229 SIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALH 308 (345)
T ss_dssp CEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred ccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHH
Confidence 1 111 01 11233 367888888888668999999999999999999999999999999987
Q ss_pred HHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 310 YSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 310 ~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
+. |+. +++.+.++|+.+|...|+++++|+++.
T Consensus 309 ~~----gP~----~~~~i~~~L~~~l~~~G~~si~e~~G~ 340 (345)
T 3oix_A 309 QE----GPQ----IFKRITKELXAIMTEKGYETLEDFRGK 340 (345)
T ss_dssp HH----CTH----HHHHHHHHHHHHHHHHTCCSGGGTTTC
T ss_pred hc----ChH----HHHHHHHHHHHHHHHcCCCCHHHHHhH
Confidence 74 653 677899999999999999999999875
No 31
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.88 E-value=1.1e-21 Score=200.00 Aligned_cols=136 Identities=20% Similarity=0.282 Sum_probs=114.4
Q ss_pred CHHHHHHHHHhc-C-CCEEEEeccCHHH----HHcCCcEEEEcCCCcc-----C-CCCCcchHHHHHHHHHHcCC-----
Q 017781 213 SWKDVKWLQTIT-K-LPILVKGVLTAED----VQAGAAGIIVSNHGAR-----Q-LDYVPATIMALEEVVKATQG----- 275 (366)
Q Consensus 213 ~~~~i~~lr~~~-~-~pv~vK~v~~~~d----~~aGad~I~vs~~gg~-----~-~~~~~~~~~~l~~i~~~~~~----- 275 (366)
.++.++++++.+ + .|++++.+.+.++ .++|+|+|+|+.++|. . .+++.|++.+|.++.+++..
T Consensus 270 ~~~~i~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~ 349 (503)
T 1me8_A 270 QKITIGWIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEET 349 (503)
T ss_dssp HHHHHHHHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhc
Confidence 467899999987 5 8999999999877 9999999999665542 2 24578899999999876532
Q ss_pred --CceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH--------------------HHhhhcCH----------------
Q 017781 276 --RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEGE---------------- 317 (366)
Q Consensus 276 --~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l--------------------~~l~~~G~---------------- 317 (366)
++|||++|||+++.|++|||++|||+|++|++|+ |+++..|+
T Consensus 350 ~~~ipvia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~ 429 (503)
T 1me8_A 350 GIYIPVCSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSF 429 (503)
T ss_dssp SEECCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC-------------
T ss_pred CCCceEEEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhccccccccccceec
Confidence 5999999999999999999999999999999995 33332222
Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHcCCCChhhhcc
Q 017781 318 -----------KGVRRVLEMLREEFELAMALSGCRSLKEITR 348 (366)
Q Consensus 318 -----------~gv~~~~~~l~~el~~~m~~~G~~~l~el~~ 348 (366)
.+|.++++.|..||+..|.++|+.+++||++
T Consensus 430 ~eg~~~~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~ 471 (503)
T 1me8_A 430 EEGVDSYVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQS 471 (503)
T ss_dssp -CCCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHH
T ss_pred ccceeEecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHh
Confidence 2578999999999999999999999999986
No 32
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.87 E-value=5.4e-21 Score=194.97 Aligned_cols=137 Identities=24% Similarity=0.335 Sum_probs=110.6
Q ss_pred CHHHHHHHHHhcC-CCEEEEeccCHHH----HHcCCcEEEEcCCCccC------CCCCcchHHHHHHHHHHcCC-CceEE
Q 017781 213 SWKDVKWLQTITK-LPILVKGVLTAED----VQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~~-~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~i~vi 280 (366)
.++.++++++.++ +|++++.+.+.++ .++|+|+|+++.++|.. ..++.++++++.++++.++. ++|||
T Consensus 284 v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVI 363 (511)
T 3usb_A 284 VIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVI 363 (511)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEE
T ss_pred hhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEE
Confidence 3578999999984 8999999999887 99999999996655531 23567889999888776643 69999
Q ss_pred EecCCCCHHHHHHHHHhCcCEEEecHHHHH--------------------HhhhcC-------------------HHH--
Q 017781 281 LDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAAEG-------------------EKG-- 319 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalGAd~V~igr~~l~--------------------~l~~~G-------------------~~g-- 319 (366)
++|||+++.|++|||++|||+|++|++|+. +++..| ++|
T Consensus 364 a~GGI~~~~di~kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~eG~~ 443 (511)
T 3usb_A 364 ADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIE 443 (511)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC--------------------------------
T ss_pred EeCCCCCHHHHHHHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccccCCCcE
Confidence 999999999999999999999999999843 332211 122
Q ss_pred --------HHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 320 --------VRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 320 --------v~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
+.++++.|..+|+..|.++|+.++++|+..
T Consensus 444 ~~~~~~~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~~ 481 (511)
T 3usb_A 444 GRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLREN 481 (511)
T ss_dssp --CBCCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHhcCcccHHHHHhC
Confidence 678899999999999999999999999864
No 33
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.87 E-value=6.3e-21 Score=190.42 Aligned_cols=120 Identities=23% Similarity=0.320 Sum_probs=99.4
Q ss_pred cCCC-EEEEeccCH--HH--------HHcCCcEEEEcCCCccCCC--------C---Ccc----hHHHHHHHHHHcCCCc
Q 017781 224 TKLP-ILVKGVLTA--ED--------VQAGAAGIIVSNHGARQLD--------Y---VPA----TIMALEEVVKATQGRI 277 (366)
Q Consensus 224 ~~~p-v~vK~v~~~--~d--------~~aGad~I~vs~~gg~~~~--------~---~~~----~~~~l~~i~~~~~~~i 277 (366)
.++| |++|...+. ++ .++|+|+|+++|++..+.+ + |++ +++.+.++++.+++++
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 4689 999988542 23 8999999999998764322 1 221 4578889998887789
Q ss_pred eEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccce
Q 017781 278 PVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 351 (366)
Q Consensus 278 ~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~l 351 (366)
|||++|||++++|+.++|++|||+|++||++++. |+ .++..++++|+.+|...|+++++|+++...
T Consensus 375 PVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~----gP----~l~~~i~~~l~~~l~~~G~~si~e~~G~~~ 440 (443)
T 1tv5_A 375 PIIASGGIFSGLDALEKIEAGASVCQLYSCLVFN----GM----KSAVQIKRELNHLLYQRGYYNLKEAIGRKH 440 (443)
T ss_dssp CEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHH----GG----GHHHHHHHHHHHHHHHHTCSSSGGGTTTTC
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc----Ch----HHHHHHHHHHHHHHHHhCCCCHHHHhhhhc
Confidence 9999999999999999999999999999999973 44 367788999999999999999999998753
No 34
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.86 E-value=1.1e-20 Score=183.19 Aligned_cols=232 Identities=17% Similarity=0.200 Sum_probs=141.6
Q ss_pred CCccceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhccCCCceEEEeeec-----
Q 017781 58 KIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVY----- 132 (366)
Q Consensus 58 ~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~~~~~~Qly~~----- 132 (366)
.+|++++++|+++++||++|++ . +.+++ +++++++.|+++++....+ .+.. ..++.+.|||+|..
T Consensus 42 ~~~l~~~i~g~~l~npi~~aag-~----~~~~~--~~~~~a~~G~g~i~~~~~~--~~~~-~g~~~pr~~~~~~d~~~in 111 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAAG-L----DKDGE--CIDALGAMGFGSIEIGTVT--PRPQ-PGNDKPRLFRLVDAEGLIN 111 (336)
T ss_dssp CCCCCEEETTEEESSSEEECTT-S----STTCC--CHHHHHHTTCSEEEEEEEC--SSCB-CCSCSCCEEEETTTTEEEE
T ss_pred CCCCCeEECCEEcCCCcEeCcc-c----CCcHH--HHHHHHHcCccEEEeCCCC--CCCC-CCCCCcceeeccccceeee
Confidence 4899999999999999999963 2 33333 8888999999987533221 1111 12235567776510
Q ss_pred ----CCHHHHHHHHHHHHHcCCC-EEEEecCCCCC---cchhHHHhhhcC-CCCccccccccccccCCCccccchhhHHH
Q 017781 133 ----KDRNVVAQLVRRAERAGFK-AIALTVDTPRL---GRREADIKNRFT-LPPFLTLKNFQGLDLGKMDEANDSGLAAY 203 (366)
Q Consensus 133 ----~d~~~~~~~l~ra~~~G~~-ai~vtvd~p~~---g~r~~d~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (366)
.++. ..+.++++++.+.+ .+++++..... .....++..... +..+. ..+.. +......++ ...
T Consensus 112 ~~g~~~~g-~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~-----d~iei-n~~sP~~~g-~~~ 183 (336)
T 1f76_A 112 RMGFNNLG-VDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYA-----GYIAI-NISSPNTPG-LRT 183 (336)
T ss_dssp CCCCCBCC-HHHHHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGC-----SEEEE-ECCCSSSTT-GGG
T ss_pred cCCCCCcC-HHHHHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhccC-----CEEEE-EccCCCCCC-ccc
Confidence 0111 23444555554443 45565532110 011223322211 00000 00000 000000011 011
Q ss_pred hhhccCCCCCHHHHHHHHHhc---------CCCEEEEeccC--HHH--------HHcCCcEEEEcCCC-ccC--------
Q 017781 204 VAGQIDRSLSWKDVKWLQTIT---------KLPILVKGVLT--AED--------VQAGAAGIIVSNHG-ARQ-------- 255 (366)
Q Consensus 204 ~~~~~d~~~~~~~i~~lr~~~---------~~pv~vK~v~~--~~d--------~~aGad~I~vs~~g-g~~-------- 255 (366)
. .++.+.|+.++++|+.+ ++||++|.... .++ .++|+|+|+|+|++ +++
T Consensus 184 ~---~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~ 260 (336)
T 1f76_A 184 L---QYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNC 260 (336)
T ss_dssp G---GSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTT
T ss_pred c---cCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCccccccccccccc
Confidence 1 23456788999999998 89999997743 222 89999999999975 332
Q ss_pred -CCC---Cc----chHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 256 -LDY---VP----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 256 -~~~---~~----~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
..+ |+ .+++.+.++++.+++++|||++|||++++|+.++|++|||+|++||++++
T Consensus 261 ~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~ 323 (336)
T 1f76_A 261 DQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIF 323 (336)
T ss_dssp TCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred ccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHh
Confidence 011 22 24577888888887789999999999999999999999999999999997
No 35
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.86 E-value=4.4e-20 Score=187.41 Aligned_cols=137 Identities=22% Similarity=0.382 Sum_probs=111.9
Q ss_pred CHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccC------CCCCcchHHHHHHHHHHcCC-CceEE
Q 017781 213 SWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~i~vi 280 (366)
.++.++++|+.+ ++||+++.+.+.++ .++|||+|+|++.+|.. ...+.+.++++.+++++++. ++|||
T Consensus 257 ~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVI 336 (490)
T 4avf_A 257 VIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLI 336 (490)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEE
T ss_pred HHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEE
Confidence 457899999998 78999998999887 99999999996544431 34567899999999987743 69999
Q ss_pred EecCCCCHHHHHHHHHhCcCEEEecHHHHH--------------------HhhhcC------------------------
Q 017781 281 LDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAAEG------------------------ 316 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalGAd~V~igr~~l~--------------------~l~~~G------------------------ 316 (366)
++|||+++.|+.|+|++|||+|++|++|+. +++..|
T Consensus 337 a~GGI~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~~~ 416 (490)
T 4avf_A 337 ADGGIRFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKLV 416 (490)
T ss_dssp EESCCCSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC--------------------------------
T ss_pred EeCCCCCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhccccccccccc
Confidence 999999999999999999999999998843 322100
Q ss_pred HH----------HHHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 317 EK----------GVRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 317 ~~----------gv~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
++ .+.++++.|..+|+..|.++|+.+++||+..
T Consensus 417 ~eg~~~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 417 PEGIEGRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp -------CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred CCCcEEcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 12 3568999999999999999999999999865
No 36
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.85 E-value=3.3e-20 Score=188.53 Aligned_cols=137 Identities=23% Similarity=0.337 Sum_probs=112.4
Q ss_pred CHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccC------CCCCcchHHHHHHHHHHcCC-CceEE
Q 017781 213 SWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~i~vi 280 (366)
.++.++++|+.+ ++||+++.+.+.++ .++|||+|+|++..|.. ...+.+.++++.+++++++. ++|||
T Consensus 259 ~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVI 338 (496)
T 4fxs_A 259 VLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVI 338 (496)
T ss_dssp HHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEE
T ss_pred HHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEE
Confidence 457899999998 79999999999887 99999999998644422 13467889999999887632 69999
Q ss_pred EecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhc-------------------------C----------------H--
Q 017781 281 LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAE-------------------------G----------------E-- 317 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~-------------------------G----------------~-- 317 (366)
++|||+++.|+.|++++|||+|++|++|+....+. | +
T Consensus 339 a~GGI~~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~~~eg 418 (496)
T 4fxs_A 339 ADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEG 418 (496)
T ss_dssp EESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCCCCCSB
T ss_pred EeCCCCCHHHHHHHHHcCCCeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhccccccccccccccccccCCc
Confidence 99999999999999999999999999985321110 0 0
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 318 --------KGVRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 318 --------~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
..+.+++..|..+|+..|.++|+.+++||+..
T Consensus 419 ~~~~v~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~ 458 (496)
T 4fxs_A 419 IEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 458 (496)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cEEeCCCCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 13779999999999999999999999999853
No 37
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.85 E-value=5.6e-20 Score=179.51 Aligned_cols=242 Identities=16% Similarity=0.116 Sum_probs=152.0
Q ss_pred CCCCCccceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceec-CCCCCCC--------------------
Q 017781 55 DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWSTSS-------------------- 113 (366)
Q Consensus 55 ~~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v-s~~~~~~-------------------- 113 (366)
...+.||+|+++|++|++||++|+=.+ +.+.+..++....|.++++ +|.+..+
T Consensus 31 g~~~~~L~v~~~Gl~f~NPvglAaG~~------~~~~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~ 104 (354)
T 3tjx_A 31 GRGSMSLQVNLLNNTFANPFMNAAGVM------CTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSM 104 (354)
T ss_dssp --CCCCCCEEETTEEESSSEEECTTSS------CSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECC
T ss_pred CCCCCceeEEECCEEcCCCcEEccCCC------CCCHHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEccccccccc
Confidence 346889999999999999999997212 3467788888999988774 3322211
Q ss_pred ------HH----HHhccC---CCceEEEeeecCCHHHHHHHHHHHHH---cCCCEEEEecCCCCCcchhHHHhhhcCCCC
Q 017781 114 ------VE----EVASTG---PGIRFFQLYVYKDRNVVAQLVRRAER---AGFKAIALTVDTPRLGRREADIKNRFTLPP 177 (366)
Q Consensus 114 ------~e----~i~~~~---~~~~~~Qly~~~d~~~~~~~l~ra~~---~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~ 177 (366)
.+ .+.+.. ..+...++.. .+.+...+..+++.+ .+++++.||+.||.. |
T Consensus 105 G~~n~G~~~~~~~~~~~~~~~~~pvivsi~g-~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~-------------~- 169 (354)
T 3tjx_A 105 GLPNNGFDFYLAYAAEQHDYGKKPLFLSMSG-LSMRENVEMCKRLAAVATEKGVILELNLSCPNV-------------P- 169 (354)
T ss_dssp CCCBCCHHHHHHHHHHTCCTTTCCEEEEECC-SSHHHHHHHHHHHHHHHHHHCCEEEEECC-------------------
T ss_pred ccCCHHHHHHHHHHHHhhccCCceEEEEEec-CChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCC-------------c-
Confidence 11 111111 1344555542 233333333333322 356666666666632 0
Q ss_pred ccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH----------HH-cCCcEE
Q 017781 178 FLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED----------VQ-AGAAGI 246 (366)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d----------~~-aGad~I 246 (366)
+... + +.+++...+.++++++.++.|+.+|......+ .+ .+++++
T Consensus 170 ---------------------g~~~-l--~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i 225 (354)
T 3tjx_A 170 ---------------------GKPQ-V--AYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFI 225 (354)
T ss_dssp --------------------------C--TTSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEE
T ss_pred ---------------------chhh-h--ccCHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchh
Confidence 0000 0 01233345668899999999999998753221 23 345555
Q ss_pred EEcCCCcc-------------------CCCCCcchH----HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEE
Q 017781 247 IVSNHGAR-------------------QLDYVPATI----MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 303 (366)
Q Consensus 247 ~vs~~gg~-------------------~~~~~~~~~----~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ 303 (366)
...|.... +..+|++.+ +.+.++++.+ .++|||++|||+|++|++++|.+|||+||
T Consensus 226 ~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~-~~~pIIg~GGI~s~~Da~e~i~aGAs~Vq 304 (354)
T 3tjx_A 226 TCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQ 304 (354)
T ss_dssp EECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTEEEEE
T ss_pred heecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhc-CCCcEEEeCCcCCHHHHHHHHHcCCCEEE
Confidence 44332110 112344443 3455555554 37899999999999999999999999999
Q ss_pred ecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcccc
Q 017781 304 IGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 350 (366)
Q Consensus 304 igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~ 350 (366)
|||+++|. |+. ++..|++||+.+|+..|+++++|+++..
T Consensus 305 v~Ta~~y~----GP~----~~~~I~~~L~~~L~~~G~~si~e~~G~~ 343 (354)
T 3tjx_A 305 VGTALQEE----GPS----IFERLTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp ECHHHHHH----CTT----HHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred EChhhhhc----Cch----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 99999884 664 6678899999999999999999999874
No 38
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.84 E-value=7.7e-20 Score=185.96 Aligned_cols=138 Identities=25% Similarity=0.416 Sum_probs=114.6
Q ss_pred CCHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccC------CCCCcchHHHHHHHHHHcCC-CceE
Q 017781 212 LSWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~i~v 279 (366)
..|+.++++|+.+ ++||+++++.+.++ .++|+|+|++++++|.. ..++.+++..+.++++.++. ++||
T Consensus 264 ~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipv 343 (494)
T 1vrd_A 264 RVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPI 343 (494)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCE
T ss_pred HHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCE
Confidence 3678899999999 79999999999988 89999999999887631 12456788888888877543 7999
Q ss_pred EEecCCCCHHHHHHHHHhCcCEEEecHHHHH--------------------Hhhh-----cC--------------HHH-
Q 017781 280 FLDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAA-----EG--------------EKG- 319 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalGAd~V~igr~~l~--------------------~l~~-----~G--------------~~g- 319 (366)
|++|||+++.|++|+|++|||+|++||+|+. ++++ .| ++|
T Consensus 344 ia~GGI~~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~~~~g~ 423 (494)
T 1vrd_A 344 IADGGIRYSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGI 423 (494)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC-------------------------C
T ss_pred EEECCcCCHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccccCCcc
Confidence 9999999999999999999999999999972 2221 01 244
Q ss_pred ---------HHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 320 ---------VRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 320 ---------v~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
+.++++.+..+|+..|.++|+.++.+|++.
T Consensus 424 ~~~~~~~~~v~~~~~~l~~~l~~~~~~~G~~~~~~l~~~ 462 (494)
T 1vrd_A 424 EGMVPYKGTVKDVVHQLVGGLRSGMGYIGARTIKELQEK 462 (494)
T ss_dssp BCCEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHH
T ss_pred eEccCcCCCHHHHHHHHHHHHHHHhhhcCCCCHHHHHhh
Confidence 679999999999999999999999999865
No 39
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.83 E-value=2e-19 Score=175.39 Aligned_cols=239 Identities=18% Similarity=0.212 Sum_probs=170.6
Q ss_pred cCCceEecccccccccCChhhHHHHHHHHHcCC-ceecCCCCCC------CHHHHhccCC--CceEEEeeecCCHHHHHH
Q 017781 70 ISMPIMIAPTAMQKMAHPEGEYATARAASAAGT-IMTLSSWSTS------SVEEVASTGP--GIRFFQLYVYKDRNVVAQ 140 (366)
Q Consensus 70 l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~-~~~vs~~~~~------~~e~i~~~~~--~~~~~Qly~~~d~~~~~~ 140 (366)
+++||++|||++. .+..++..++++|. .++++++.+. ..+++.+..+ .+.++||+ ..+++...+
T Consensus 2 l~nriv~APM~g~------td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~p~~~~~ 74 (350)
T 3b0p_A 2 LDPRLSVAPMVDR------TDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLA-GSDPKSLAE 74 (350)
T ss_dssp CCCSEEECCCTTT------SSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEE-CSCHHHHHH
T ss_pred CCCCEEECCCCCC------CHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeC-CCCHHHHHH
Confidence 5789999999863 37788888999986 6777776432 1123444333 68999998 678899999
Q ss_pred HHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHH
Q 017781 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWL 220 (366)
Q Consensus 141 ~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~l 220 (366)
.+++++++|++.|.|++.||..-.|. .++ +..++ .++.+..+.++++
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~~~~----d~~---------------------------G~~l~--~~~~~~~eiv~av 121 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEKAQE----GGY---------------------------GACLL--LDLARVREILKAM 121 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHHHHH----TTC---------------------------GGGGG--GCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCcCCCCcCcC----CCc---------------------------chhHH--hCHHHHHHHHHHH
Confidence 99999999999999999999641111 011 00111 2455677889999
Q ss_pred HHhcCCCEEEEeccCH------HH--------HHcCCcEEEEcCCCccC-C------CCCcchHHHHHHHHHHcCCCceE
Q 017781 221 QTITKLPILVKGVLTA------ED--------VQAGAAGIIVSNHGARQ-L------DYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 221 r~~~~~pv~vK~v~~~------~d--------~~aGad~I~vs~~gg~~-~------~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
++.+++||++|...+. ++ .++|+|+|+|++....+ . ...+..++.+.++++.++ ++||
T Consensus 122 ~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~-~iPV 200 (350)
T 3b0p_A 122 GEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP-QLTF 200 (350)
T ss_dssp HHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCT-TSEE
T ss_pred HHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC-CCeE
Confidence 9999999999976422 12 89999999997642111 1 111346888889988773 6999
Q ss_pred EEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhh--------hcC---HHHHHHHHHHHHHHHHHHHHHcCCCChhhhcc
Q 017781 280 FLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA--------AEG---EKGVRRVLEMLREEFELAMALSGCRSLKEITR 348 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~--------~~G---~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~ 348 (366)
|++|||++++|+.++++ |||+||+||+++.... ..| .....++++.+.+.++..+.. |. .+.++++
T Consensus 201 ianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~k 277 (350)
T 3b0p_A 201 VTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVLK-GT-PPWAVLR 277 (350)
T ss_dssp EEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGGGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHHHH-TC-CHHHHHT
T ss_pred EEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHc-Cc-cHHHHHH
Confidence 99999999999999998 9999999999865311 112 113456777788888877774 65 6888887
Q ss_pred ccee
Q 017781 349 DHIV 352 (366)
Q Consensus 349 ~~l~ 352 (366)
..++
T Consensus 278 h~~~ 281 (350)
T 3b0p_A 278 HMLN 281 (350)
T ss_dssp TSTT
T ss_pred HHHH
Confidence 7654
No 40
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.83 E-value=2.3e-19 Score=183.38 Aligned_cols=138 Identities=22% Similarity=0.347 Sum_probs=107.9
Q ss_pred CCCCHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccC------CCCCcc---hHHHHHHHHHHcCC
Q 017781 210 RSLSWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQ------LDYVPA---TIMALEEVVKATQG 275 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~------~~~~~~---~~~~l~~i~~~~~~ 275 (366)
+...++.++++|+.+ ++||++|.+.+.++ .++|+|+|++++|+|.. .+++.+ .+..+.++++.+
T Consensus 280 ~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~-- 357 (514)
T 1jcn_A 280 SVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF-- 357 (514)
T ss_dssp SHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--
T ss_pred chhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC--
Confidence 334578899999999 89999999999887 89999999997765421 123433 345556665555
Q ss_pred CceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH--------------------hhh---------------------
Q 017781 276 RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS--------------------LAA--------------------- 314 (366)
Q Consensus 276 ~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~--------------------l~~--------------------- 314 (366)
++|||++|||+++.|+.|++++|||+|++||+|+.. +..
T Consensus 358 ~ipVia~GGI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~ 437 (514)
T 1jcn_A 358 GVPIIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKV 437 (514)
T ss_dssp TCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC--------------------------------------
T ss_pred CCCEEEECCCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhccccccc
Confidence 799999999999999999999999999999988641 110
Q ss_pred cCHHHH----------HHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 315 EGEKGV----------RRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 315 ~G~~gv----------~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
.+++|| .++++.|..||+..|.++|+++++||++.
T Consensus 438 ~~~~gv~~~~~~~g~~~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 482 (514)
T 1jcn_A 438 KIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSM 482 (514)
T ss_dssp ------------CCCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred eecccceecCCCcccHHHHHHHHHHHHHHHHHhhCcccHHHHHhh
Confidence 023555 89999999999999999999999999874
No 41
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.83 E-value=1.7e-19 Score=183.22 Aligned_cols=138 Identities=15% Similarity=0.242 Sum_probs=114.6
Q ss_pred CCHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccC------CCCCcchHHHHHHHHHHcC-CCceE
Q 017781 212 LSWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ-GRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~------~~~~~~~~~~l~~i~~~~~-~~i~v 279 (366)
..|+.++++++.+ ++|++.+++.+.++ .++|+|+|.+++.+|.. ..++.++++.+.+++.... .++||
T Consensus 260 ~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipv 339 (491)
T 1zfj_A 260 GVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTI 339 (491)
T ss_dssp HHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEE
T ss_pred hHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCE
Confidence 3578899999999 89999999998877 89999999998765542 2346678888888887543 37999
Q ss_pred EEecCCCCHHHHHHHHHhCcCEEEecHHHHH--------------------HhhhcC----------------------H
Q 017781 280 FLDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAAEG----------------------E 317 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalGAd~V~igr~~l~--------------------~l~~~G----------------------~ 317 (366)
|++|||+++.|++|++++|||+|++|++|+. +++..+ +
T Consensus 340 ia~GGi~~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~~~~~~ 419 (491)
T 1zfj_A 340 IADGGIKYSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVP 419 (491)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCC
T ss_pred EeeCCCCCHHHHHHHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhccccccccccccccccccCc
Confidence 9999999999999999999999999999972 111101 2
Q ss_pred HH----------HHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 318 KG----------VRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 318 ~g----------v~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
+| +..+++.|..||+..|.++|+.++.+|+..
T Consensus 420 ~g~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G~~~~~~l~~~ 461 (491)
T 1zfj_A 420 EGIEGRVAYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHEN 461 (491)
T ss_dssp SBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred CcceEecCcCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhc
Confidence 33 899999999999999999999999999865
No 42
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.81 E-value=4.5e-19 Score=179.98 Aligned_cols=134 Identities=24% Similarity=0.359 Sum_probs=106.8
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHH---HHcCCcEEEEcCCCccC-------CCCCcchHHHHHHHHHHcCC-CceEEEe
Q 017781 214 WKDVKWLQTITKLPILVKGVLTAED---VQAGAAGIIVSNHGARQ-------LDYVPATIMALEEVVKATQG-RIPVFLD 282 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~vK~v~~~~d---~~aGad~I~vs~~gg~~-------~~~~~~~~~~l~~i~~~~~~-~i~vi~~ 282 (366)
++.++++++.+++|+++|++.+.++ .. |+|+|.+ +.|+.. ..+|.+++..+.++.+.... ++|||++
T Consensus 257 L~~I~~l~~~~~vpvi~k~v~~~~~a~~l~-G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia~ 334 (486)
T 2cu0_A 257 IKSMKEMRQKVDADFIVGNIANPKAVDDLT-FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIAD 334 (486)
T ss_dssp HHHHHHHHHTCCSEEEEEEECCHHHHTTCT-TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred hhHHHHHHHHhCCccccCCcCCHHHHHHhh-CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEec
Confidence 4568999999999999999999887 44 9999999 544322 24566666666665544321 6999999
Q ss_pred cCCCCHHHHHHHHHhCcCEEEecHHHHH--------------------HhhhcC----------------------HHH-
Q 017781 283 GGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAAEG----------------------EKG- 319 (366)
Q Consensus 283 GGI~~~~dv~kalalGAd~V~igr~~l~--------------------~l~~~G----------------------~~g- 319 (366)
|||+++.|++|||++|||+|++|++|+. +++..| ++|
T Consensus 335 GGi~~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~~~~~~~~g~ 414 (486)
T 2cu0_A 335 GGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEGV 414 (486)
T ss_dssp SCCCSHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCBC
T ss_pred CCCCCHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhcccccccccccccccccccccce
Confidence 9999999999999999999999999983 221111 233
Q ss_pred ---------HHHHHHHHHHHHHHHHHHcCCCChhhhccc
Q 017781 320 ---------VRRVLEMLREEFELAMALSGCRSLKEITRD 349 (366)
Q Consensus 320 ---------v~~~~~~l~~el~~~m~~~G~~~l~el~~~ 349 (366)
+..+++.|..+|+..|.++|+.++.+|+..
T Consensus 415 ~~~~~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~~ 453 (486)
T 2cu0_A 415 EGVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEK 453 (486)
T ss_dssp EEEEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred EEeecccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHhh
Confidence 889999999999999999999999999854
No 43
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.71 E-value=8.8e-16 Score=148.16 Aligned_cols=193 Identities=18% Similarity=0.234 Sum_probs=137.5
Q ss_pred eEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHH-------hccCCCceEEEeeecC---
Q 017781 64 TVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYK--- 133 (366)
Q Consensus 64 ~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i-------~~~~~~~~~~Qly~~~--- 133 (366)
++++ +..||+.|||++.+ +.+++.++.+.|...++......+.+++ ++....|+.++++...
T Consensus 10 ~~l~--~~~Pii~apM~gvs------~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~ 81 (328)
T 2gjl_A 10 ETFG--VEHPIMQGGMQWVG------RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQK 81 (328)
T ss_dssp HHHT--CSSSEEECCCTTTC------SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSS
T ss_pred HHhC--CCCCEEECCCCCCC------cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEecccccc
Confidence 3454 46899999997533 5689999999997666643322224433 2223357788888741
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 213 (366)
+++ ..+.++.+.+.|++.+.++.++|
T Consensus 82 ~~~-~~~~~~~~~~~g~d~V~~~~g~p----------------------------------------------------- 107 (328)
T 2gjl_A 82 PVP-YAEYRAAIIEAGIRVVETAGNDP----------------------------------------------------- 107 (328)
T ss_dssp CCC-HHHHHHHHHHTTCCEEEEEESCC-----------------------------------------------------
T ss_pred Ccc-HHHHHHHHHhcCCCEEEEcCCCc-----------------------------------------------------
Confidence 122 45677888889999887654321
Q ss_pred HHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCC--CccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 214 WKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
++.++++++. ++|++.+ +.+.++ .++|+|+|++++. ||+......++++.++++++.+ ++|||++|||++
T Consensus 108 ~~~~~~l~~~-gi~vi~~-v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~ 183 (328)
T 2gjl_A 108 GEHIAEFRRH-GVKVIHK-CTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFAD 183 (328)
T ss_dssp HHHHHHHHHT-TCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCS
T ss_pred HHHHHHHHHc-CCCEEee-CCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCCC
Confidence 3456777775 7888765 567666 8899999999763 3432212357889999998877 799999999999
Q ss_pred HHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHH
Q 017781 288 GTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRR 322 (366)
Q Consensus 288 ~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~ 322 (366)
++|+.+++++|||+|++||+|+....+.+.+.+.+
T Consensus 184 ~~~v~~al~~GAdgV~vGs~~~~~~e~~~~~~~k~ 218 (328)
T 2gjl_A 184 GRGLVAALALGADAINMGTRFLATRECPIHPAVKA 218 (328)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHTSSSSCSCHHHHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHcCccccccHHHHH
Confidence 99999999999999999999988755545444433
No 44
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.70 E-value=5.6e-16 Score=149.88 Aligned_cols=179 Identities=20% Similarity=0.234 Sum_probs=130.9
Q ss_pred cCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHH-------hccCCCceEEEeeecCCHHHHHHHH
Q 017781 70 ISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYKDRNVVAQLV 142 (366)
Q Consensus 70 l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i-------~~~~~~~~~~Qly~~~d~~~~~~~l 142 (366)
+.+||+.|||++.+ +.+++.++.+.|...++... ..+.+++ .+....++.+|++.. +++ ..+.+
T Consensus 11 ~~~Pii~apM~g~s------~~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~-~~~-~~~~~ 81 (332)
T 2z6i_A 11 IDYPIFQGGMAWVA------DGDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLL-SPF-VEDIV 81 (332)
T ss_dssp CSSSEEECCCTTTC------CHHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTT-STT-HHHHH
T ss_pred CCCCEEeCCCCCCC------cHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCC-CCC-HHHHH
Confidence 67999999998532 56799999999975455322 2334432 222335788998853 222 45678
Q ss_pred HHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHH
Q 017781 143 RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQT 222 (366)
Q Consensus 143 ~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~ 222 (366)
+++.++|++.+.++.++| .+.++++|+
T Consensus 82 ~~a~~~g~d~V~~~~g~p-----------------------------------------------------~~~i~~l~~ 108 (332)
T 2z6i_A 82 DLVIEEGVKVVTTGAGNP-----------------------------------------------------SKYMERFHE 108 (332)
T ss_dssp HHHHHTTCSEEEECSSCG-----------------------------------------------------GGTHHHHHH
T ss_pred HHHHHCCCCEEEECCCCh-----------------------------------------------------HHHHHHHHH
Confidence 888999999988765432 113556666
Q ss_pred hcCCCEEEEeccCHHH----HHcCCcEEEEcCC--CccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHH
Q 017781 223 ITKLPILVKGVLTAED----VQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 296 (366)
Q Consensus 223 ~~~~pv~vK~v~~~~d----~~aGad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kala 296 (366)
.++|+++|. .+.++ .++|+|+|++++. ||+. +..++++.++++++.+ ++|||++|||.+++++.++++
T Consensus 109 -~g~~v~~~v-~~~~~a~~~~~~GaD~i~v~g~~~GG~~--g~~~~~~ll~~i~~~~--~iPViaaGGI~~~~~~~~al~ 182 (332)
T 2z6i_A 109 -AGIIVIPVV-PSVALAKRMEKIGADAVIAEGMEAGGHI--GKLTTMTLVRQVATAI--SIPVIAAGGIADGEGAAAGFM 182 (332)
T ss_dssp -TTCEEEEEE-SSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHH
T ss_pred -cCCeEEEEe-CCHHHHHHHHHcCCCEEEEECCCCCCCC--CCccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHH
Confidence 488999885 55555 8899999999764 4432 2356889999999888 799999999999999999999
Q ss_pred hCcCEEEecHHHHHHhhhcC
Q 017781 297 LGASGIFIGRPVVYSLAAEG 316 (366)
Q Consensus 297 lGAd~V~igr~~l~~l~~~G 316 (366)
+|||+|++||+|+....+..
T Consensus 183 ~GAdgV~vGs~~l~~~e~~~ 202 (332)
T 2z6i_A 183 LGAEAVQVGTRFVVAKESNA 202 (332)
T ss_dssp TTCSEEEECHHHHTBTTCCS
T ss_pred cCCCEEEecHHHhcCccccc
Confidence 99999999999987654433
No 45
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.70 E-value=1.5e-15 Score=146.59 Aligned_cols=186 Identities=20% Similarity=0.259 Sum_probs=134.1
Q ss_pred cccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHH-------hccCCCceEEEeeecCCHHHHHH
Q 017781 68 FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYKDRNVVAQ 140 (366)
Q Consensus 68 ~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i-------~~~~~~~~~~Qly~~~d~~~~~~ 140 (366)
..+..||+.|||++.+ +..++.++.+.|...+++.. ..+.+++ .+....++.+++... ++. ..+
T Consensus 23 l~~~~Pii~apM~gvs------~~~la~av~~aGglG~i~~~-~~~~~~l~~~i~~i~~~~~~p~gVnl~~~-~~~-~~~ 93 (326)
T 3bo9_A 23 LEIEHPILMGGMAWAG------TPTLAAAVSEAGGLGIIGSG-AMKPDDLRKAISELRQKTDKPFGVNIILV-SPW-ADD 93 (326)
T ss_dssp HTCSSSEEECCCTTTS------CHHHHHHHHHTTSBEEEECT-TCCHHHHHHHHHHHHTTCSSCEEEEEETT-STT-HHH
T ss_pred cCCCCCEEECCCCCCC------CHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEEecc-CCC-HHH
Confidence 4567999999998643 66899999999976666432 2344433 222224677887652 222 356
Q ss_pred HHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHH
Q 017781 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWL 220 (366)
Q Consensus 141 ~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~l 220 (366)
.++.+.+.|++.+.++.++| .+.++++
T Consensus 94 ~~~~~~~~g~d~V~l~~g~p-----------------------------------------------------~~~~~~l 120 (326)
T 3bo9_A 94 LVKVCIEEKVPVVTFGAGNP-----------------------------------------------------TKYIREL 120 (326)
T ss_dssp HHHHHHHTTCSEEEEESSCC-----------------------------------------------------HHHHHHH
T ss_pred HHHHHHHCCCCEEEECCCCc-----------------------------------------------------HHHHHHH
Confidence 77788889999887754432 1245666
Q ss_pred HHhcCCCEEEEeccCHHH----HHcCCcEEEEcC--CCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHH
Q 017781 221 QTITKLPILVKGVLTAED----VQAGAAGIIVSN--HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 294 (366)
Q Consensus 221 r~~~~~pv~vK~v~~~~d----~~aGad~I~vs~--~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~ka 294 (366)
++ .++|++++ +.+.++ .++|+|+|++++ +||++ +..++++.++++++.+ ++|||++|||++++|+.++
T Consensus 121 ~~-~g~~v~~~-v~s~~~a~~a~~~GaD~i~v~g~~~GG~~--G~~~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~a 194 (326)
T 3bo9_A 121 KE-NGTKVIPV-VASDSLARMVERAGADAVIAEGMESGGHI--GEVTTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAA 194 (326)
T ss_dssp HH-TTCEEEEE-ESSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHH
T ss_pred HH-cCCcEEEE-cCCHHHHHHHHHcCCCEEEEECCCCCccC--CCccHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHH
Confidence 65 36777654 566666 889999999987 45543 2357889999999887 7999999999999999999
Q ss_pred HHhCcCEEEecHHHHHHhhhcCHHHHH
Q 017781 295 LALGASGIFIGRPVVYSLAAEGEKGVR 321 (366)
Q Consensus 295 lalGAd~V~igr~~l~~l~~~G~~gv~ 321 (366)
+++||++|++||+|+.+..+.+.+++.
T Consensus 195 l~~GA~gV~vGs~~~~~~e~~~~~~~k 221 (326)
T 3bo9_A 195 FALGAEAVQMGTRFVASVESDVHPVYK 221 (326)
T ss_dssp HHHTCSEEEESHHHHTBSSCCSCHHHH
T ss_pred HHhCCCEEEechHHHcCccccccHHHH
Confidence 999999999999998765554444433
No 46
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.65 E-value=9e-15 Score=143.36 Aligned_cols=201 Identities=22% Similarity=0.203 Sum_probs=125.0
Q ss_pred CCceEeccccc-ccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHh-------ccCCCceEEEeeecCCH----HHH
Q 017781 71 SMPIMIAPTAM-QKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA-------STGPGIRFFQLYVYKDR----NVV 138 (366)
Q Consensus 71 ~~Pi~iApm~~-~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~-------~~~~~~~~~Qly~~~d~----~~~ 138 (366)
..||+.|||++ .+ +.+++.++.++|...+++.. ..+.+++. +..+.|+.+|++...+. +..
T Consensus 10 ~~Pii~apMaggvs------~~~la~av~~aGglG~i~~~-~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~ 82 (369)
T 3bw2_A 10 PLPIVQAPMAGGVS------VPQLAAAVCEAGGLGFLAAG-YKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAV 82 (369)
T ss_dssp SSSEEECCCTTTTS------CHHHHHHHHHTTSBEEEECT-TSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHH
T ss_pred cCCEEeCCCCCCCC------cHHHHHHHHHCCCEEEcCCC-CCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHH
Confidence 79999999975 32 66899999999987777542 34444432 22335778888764331 122
Q ss_pred HH----HHHHHHHcCCCEEEEecCCCCCcc--hhHHH---hhhcCCCCccccccccccccCCCccccchhhHHHhhhccC
Q 017781 139 AQ----LVRRAERAGFKAIALTVDTPRLGR--READI---KNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (366)
Q Consensus 139 ~~----~l~ra~~~G~~ai~vtvd~p~~g~--r~~d~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (366)
.+ +...+++.|.. ++.|.... +..+. ......+ .+.- ..
T Consensus 83 ~~~~~~l~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~g~~--------------------------~V~~-~~ 130 (369)
T 3bw2_A 83 EVYAHQLAGEAAWYETE-----LGDPDGGRDDGYDAKLAVLLDDPVP--------------------------VVSF-HF 130 (369)
T ss_dssp HHHHHHTHHHHHHTTCC-----CCCSCSCSSTTHHHHHHHHHHSCCS--------------------------EEEE-ES
T ss_pred HHHHHHHHHHHHHcCCC-----cCcccccccccHHHHHHHHHhcCCC--------------------------EEEE-eC
Confidence 22 22333444433 22222110 00110 0000000 0000 00
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCC--Ccc---CCCC----C--cchHHHHHHHHHHcC
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNH--GAR---QLDY----V--PATIMALEEVVKATQ 274 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~--gg~---~~~~----~--~~~~~~l~~i~~~~~ 274 (366)
....++.++++++ .++|++++ +.+.++ .++|+|+|++++. ||+ .... + .+.++.++++++.+
T Consensus 131 g~~~~~~i~~~~~-~g~~v~~~-v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~- 207 (369)
T 3bw2_A 131 GVPDREVIARLRR-AGTLTLVT-ATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV- 207 (369)
T ss_dssp SCCCHHHHHHHHH-TTCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-
T ss_pred CCCcHHHHHHHHH-CCCeEEEE-CCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc-
Confidence 1124778899888 47777665 567766 8899999999763 332 2111 1 34588899998877
Q ss_pred CCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhh
Q 017781 275 GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 314 (366)
Q Consensus 275 ~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~ 314 (366)
++|||++|||++++++.+++++|||+|++||+|+....+
T Consensus 208 -~iPViaaGGI~~~~~~~~~l~~GAd~V~vGs~~~~~~e~ 246 (369)
T 3bw2_A 208 -DIPVVAAGGIMRGGQIAAVLAAGADAAQLGTAFLATDES 246 (369)
T ss_dssp -SSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSTTC
T ss_pred -CceEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccc
Confidence 899999999999999999999999999999999865433
No 47
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.59 E-value=4.6e-14 Score=136.79 Aligned_cols=222 Identities=18% Similarity=0.198 Sum_probs=141.0
Q ss_pred eeEcCcccCCceEecccccccccCChh---hH--HHHHHHHHcCCceecCCCCCC--------------CHH------HH
Q 017781 63 TTVLGFKISMPIMIAPTAMQKMAHPEG---EY--ATARAASAAGTIMTLSSWSTS--------------SVE------EV 117 (366)
Q Consensus 63 t~l~g~~l~~Pi~iApm~~~~l~~~~~---e~--~la~aa~~~G~~~~vs~~~~~--------------~~e------~i 117 (366)
.+|.+.+++++|++|||+...-..+++ +. ..-+.-++.|++++++++.+. +.+ ++
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~ 88 (338)
T 1z41_A 9 ITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKL 88 (338)
T ss_dssp EEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHH
T ss_pred eeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHH
Confidence 578899999999999997654210222 22 222222246788877554211 112 22
Q ss_pred hc---cCCCceEEEeeec----------------------CCH------------HHHHHHHHHHHHcCCCEEEEecCCC
Q 017781 118 AS---TGPGIRFFQLYVY----------------------KDR------------NVVAQLVRRAERAGFKAIALTVDTP 160 (366)
Q Consensus 118 ~~---~~~~~~~~Qly~~----------------------~d~------------~~~~~~l~ra~~~G~~ai~vtvd~p 160 (366)
.+ ....+.++||+-. ..+ +...+..++++++|++++.|+..|.
T Consensus 89 ~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~g 168 (338)
T 1z41_A 89 TEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHG 168 (338)
T ss_dssp HHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTT
T ss_pred HHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccc
Confidence 21 2235788999731 011 3445666788889999999998763
Q ss_pred CCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEecc------
Q 017781 161 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVL------ 234 (366)
Q Consensus 161 ~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~------ 234 (366)
.. .+.|--|. ...+ +..-+ +. +. ....+..+.++.+|+.++.||.+|...
T Consensus 169 yL-------l~qFlsp~-~n~R------------~d~yG-Gs-le--nr~r~~~eiv~avr~~v~~pv~vris~~~~~~~ 224 (338)
T 1z41_A 169 YL-------IHEFLSPL-SNHR------------TDEYG-GS-PE--NRYRFLREIIDEVKQVWDGPLFVRVSASDYTDK 224 (338)
T ss_dssp SH-------HHHHHCTT-TCCC------------CSTTS-SS-HH--HHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTT
T ss_pred hH-------HHHccCCC-cCCc------------CcccC-cc-hh--hhHHHHHHHHHHHHHHcCCcEEEEecCcccCCC
Confidence 21 11221111 0000 00000 00 11 123456788999999999999999754
Q ss_pred --CHHH--------HHcCCcEEEEcCCCcc-C-CCCCc-chHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cC
Q 017781 235 --TAED--------VQAGAAGIIVSNHGAR-Q-LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-AS 300 (366)
Q Consensus 235 --~~~d--------~~aGad~I~vs~~gg~-~-~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad 300 (366)
+.++ .++|+|+|.+++.... + ...++ ..++.+.++++.+ ++|||+.|||++++++.++|+.| ||
T Consensus 225 g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~G~aD 302 (338)
T 1z41_A 225 GLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQNGRAD 302 (338)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHTTSCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHcCCce
Confidence 3444 7899999999874321 1 11222 2467788888888 89999999999999999999999 99
Q ss_pred EEEecHHHHH
Q 017781 301 GIFIGRPVVY 310 (366)
Q Consensus 301 ~V~igr~~l~ 310 (366)
+|++||+++.
T Consensus 303 ~V~iGR~~i~ 312 (338)
T 1z41_A 303 LIFIGRELLR 312 (338)
T ss_dssp EEEECHHHHH
T ss_pred EEeecHHHHh
Confidence 9999999986
No 48
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.45 E-value=1.2e-12 Score=128.16 Aligned_cols=218 Identities=17% Similarity=0.136 Sum_probs=140.3
Q ss_pred eeEcCcccCCceEecccccccccCChh---hHHHHHHHHHcCCceecCCCCCC--------------CHHH------Hhc
Q 017781 63 TTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAASAAGTIMTLSSWSTS--------------SVEE------VAS 119 (366)
Q Consensus 63 t~l~g~~l~~Pi~iApm~~~~l~~~~~---e~~la~aa~~~G~~~~vs~~~~~--------------~~e~------i~~ 119 (366)
.+|.+.++++.|++|||+...-..+++ +..+..-++++++++++++..+. +.+. +.+
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~ 88 (365)
T 2gou_A 9 ITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVTE 88 (365)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHH
T ss_pred eeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHHHHHHH
Confidence 578899999999999997654211332 56666777777777777544211 2222 211
Q ss_pred ---cCCCceEEEeee------------------------c-----------------CCH------------HHHHHHHH
Q 017781 120 ---TGPGIRFFQLYV------------------------Y-----------------KDR------------NVVAQLVR 143 (366)
Q Consensus 120 ---~~~~~~~~Qly~------------------------~-----------------~d~------------~~~~~~l~ 143 (366)
....+.++||+- . ..+ +...+..+
T Consensus 89 ~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~ 168 (365)
T 2gou_A 89 AVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAAL 168 (365)
T ss_dssp HHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 112567889862 0 112 34556667
Q ss_pred HHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHh
Q 017781 144 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTI 223 (366)
Q Consensus 144 ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~ 223 (366)
+++++|++++-|+..|... .+.|--|. + |.. +..-+ +. +. ....+..+.++.+|+.
T Consensus 169 ~a~~aGfDgVeih~a~gYL-------l~qFlsp~--~--N~R---------~D~yG-Gs-le--nr~r~~~eiv~avr~~ 224 (365)
T 2gou_A 169 NAMEAGFDGIELHAANGYL-------INQFIDSE--A--NNR---------SDEYG-GS-LE--NRLRFLDEVVAALVDA 224 (365)
T ss_dssp HHHHTTCSEEEEECCTTSH-------HHHHHSGG--G--CCC---------CSTTS-SS-HH--HHTHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEecccchh-------HhhccCCC--c--cCc---------CcccC-cc-hh--hhHHHHHHHHHHHHHH
Confidence 7889999999998876421 11111110 0 000 00000 00 11 1234566889999999
Q ss_pred cCC-CEEEEeccC-----------HHH--------HHcCCcEEEEcCCCccCCCCCc-chHHHHHHHHHHcCCCceEEEe
Q 017781 224 TKL-PILVKGVLT-----------AED--------VQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLD 282 (366)
Q Consensus 224 ~~~-pv~vK~v~~-----------~~d--------~~aGad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~vi~~ 282 (366)
++. ||.+|.... .++ .++|+|+|.+++..- +..+ -.++.+.++++.+ ++|||+.
T Consensus 225 vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~---~~~~~~~~~~~~~i~~~~--~iPvi~~ 299 (365)
T 2gou_A 225 IGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDW---DDAPDTPVSFKRALREAY--QGVLIYA 299 (365)
T ss_dssp HCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBT---TBCCCCCHHHHHHHHHHC--CSEEEEE
T ss_pred cCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc---CCCCCccHHHHHHHHHHC--CCcEEEe
Confidence 843 999998752 122 789999999987421 1111 1356778888888 7999999
Q ss_pred cCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 283 GGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 283 GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
||| +++++.++|+.| ||+|++||+++.
T Consensus 300 Ggi-~~~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 300 GRY-NAEKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp SSC-CHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred CCC-CHHHHHHHHHCCCcceehhcHHHHh
Confidence 999 999999999998 999999999986
No 49
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.45 E-value=4.8e-13 Score=153.78 Aligned_cols=210 Identities=16% Similarity=0.177 Sum_probs=139.5
Q ss_pred eeccccCC-CCCCccceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHH-------hc
Q 017781 48 FRPRILID-VSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------AS 119 (366)
Q Consensus 48 l~pr~l~~-~~~vd~st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i-------~~ 119 (366)
|.||..+. -.+++++|.|....-..||+.|||++.. .+..|+.+++++|...+++.....+.+++ ++
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg~~PIi~a~M~~~v-----s~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~ 632 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLGVPPVMVAGMTPTT-----VPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEK 632 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHTSCSEEECCCTTTT-----CSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGG
T ss_pred cCCcceecCCCceecchhhhhccccceEEecCCCCcc-----ccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHh
Confidence 45666542 2345666654322116999999998421 26689999999999999944444555543 23
Q ss_pred cC--CCceEEEeeecCCH--HHHHHHHHHHHHcCCCE--EEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCc
Q 017781 120 TG--PGIRFFQLYVYKDR--NVVAQLVRRAERAGFKA--IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMD 193 (366)
Q Consensus 120 ~~--~~~~~~Qly~~~d~--~~~~~~l~ra~~~G~~a--i~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~ 193 (366)
.. ..++.+++...... ....++++.+.+.|++. +.++.+.
T Consensus 633 ~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~---------------------------------- 678 (2060)
T 2uva_G 633 AIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGV---------------------------------- 678 (2060)
T ss_dssp GSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSC----------------------------------
T ss_pred hcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCC----------------------------------
Confidence 33 25677777543222 22457788888888877 4332221
Q ss_pred cccchhhHHHhhhccCCCCCHH-HHHHHHHhcCCCEEEEeccCHHH--------HHcCCcEEE---EcC--CCccC--CC
Q 017781 194 EANDSGLAAYVAGQIDRSLSWK-DVKWLQTITKLPILVKGVLTAED--------VQAGAAGII---VSN--HGARQ--LD 257 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~d~~~~~~-~i~~lr~~~~~pv~vK~v~~~~d--------~~aGad~I~---vs~--~gg~~--~~ 257 (366)
| ..+ .++.+++ .+++++ +.+.+..+ .++|+|+|+ +.+ .||+. .+
T Consensus 679 ----------------p--~~e~~~~~l~~-~gi~~i-~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d 738 (2060)
T 2uva_G 679 ----------------P--SIEVANEYIQT-LGIRHI-SFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFED 738 (2060)
T ss_dssp ----------------C--CHHHHHHHHHH-SCCSEE-EECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCC
T ss_pred ----------------C--CHHHHHHHHHH-cCCeEE-EecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCccc
Confidence 1 222 3444544 478876 55555444 688999999 554 22321 23
Q ss_pred CCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHH-----------HhCcCEEEecHHHHHHhhhcCHH
Q 017781 258 YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSLAAEGEK 318 (366)
Q Consensus 258 ~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kal-----------alGAd~V~igr~~l~~l~~~G~~ 318 (366)
...+.+..+++|++.+ ++|||++|||.++.|++++| ++|||+|++|+.|+.+..+.-.+
T Consensus 739 ~~~~~l~lv~~i~~~~--~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea~~s~ 808 (2060)
T 2uva_G 739 FHQPILLMYSRIRKCS--NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEAHTSK 808 (2060)
T ss_dssp SHHHHHHHHHHHHTST--TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTSCCCH
T ss_pred ccchHHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCCCCCH
Confidence 3466788999999887 79999999999999999999 99999999999998765554333
No 50
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.43 E-value=6e-12 Score=123.03 Aligned_cols=219 Identities=17% Similarity=0.138 Sum_probs=141.7
Q ss_pred eeEcCcccCCceEecccccccccCCh---hhHHHHHHHHHcCCceecCCCCC--------------CCHHH------Hhc
Q 017781 63 TTVLGFKISMPIMIAPTAMQKMAHPE---GEYATARAASAAGTIMTLSSWST--------------SSVEE------VAS 119 (366)
Q Consensus 63 t~l~g~~l~~Pi~iApm~~~~l~~~~---~e~~la~aa~~~G~~~~vs~~~~--------------~~~e~------i~~ 119 (366)
.+|.+.++++.|++|||+...-..++ .+..+..-++++|+++++++..+ .+.+. +.+
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~ 88 (364)
T 1vyr_A 9 LKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITA 88 (364)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHHH
T ss_pred eeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHHH
Confidence 57889999999999999864321233 36677777777888888765421 12222 211
Q ss_pred ---cCCCceEEEeee------------c-----------------------------CCH------------HHHHHHHH
Q 017781 120 ---TGPGIRFFQLYV------------Y-----------------------------KDR------------NVVAQLVR 143 (366)
Q Consensus 120 ---~~~~~~~~Qly~------------~-----------------------------~d~------------~~~~~~l~ 143 (366)
....+.++||+- . ..+ +...+..+
T Consensus 89 ~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~ 168 (364)
T 1vyr_A 89 GVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVA 168 (364)
T ss_dssp HHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHH
T ss_pred HHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 223567899862 0 112 34556667
Q ss_pred HHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHh
Q 017781 144 RAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTI 223 (366)
Q Consensus 144 ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~ 223 (366)
+++++|++++-|+..|... .+.|--|. ...+ +..-+ +. +. ....+..+.++.+|+.
T Consensus 169 ~a~~aGfDgVeih~a~GyL-------l~qFlsp~-~N~R------------~D~yG-Gs-le--nr~r~~~eiv~avr~~ 224 (364)
T 1vyr_A 169 NAREAGFDLVELHSAHGYL-------LHQFLSPS-SNQR------------TDQYG-GS-VE--NRARLVLEVVDAVCNE 224 (364)
T ss_dssp HHHHTTCSEEEEEECTTSH-------HHHHHCTT-TCCC------------CSTTS-SS-HH--HHTHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEcCccchH-------HHhccCCc-cccc------------CCcCC-cc-hh--cChhhHHHHHHHHHHh
Confidence 8889999999999876321 11221110 0000 00000 00 11 1234567889999999
Q ss_pred cC-CCEEEEeccC------------HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe
Q 017781 224 TK-LPILVKGVLT------------AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 282 (366)
Q Consensus 224 ~~-~pv~vK~v~~------------~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~ 282 (366)
++ .||.+|.... .++ .++|+|+|.+++.+-.+.. ...++.+.++++.+ ++|||+.
T Consensus 225 vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--~~~~~~~~~v~~~~--~iPvi~~ 300 (364)
T 1vyr_A 225 WSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGK--PYSEAFRQKVRERF--HGVIIGA 300 (364)
T ss_dssp SCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC--CCCHHHHHHHHHHC--CSEEEEE
T ss_pred cCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCC--cccHHHHHHHHHHC--CCCEEEE
Confidence 84 3999997643 112 7899999999874321111 12456778888888 7999999
Q ss_pred cCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 283 GGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 283 GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
||| +++++.++|+.| ||+|++||+++.
T Consensus 301 Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 301 GAY-TAEKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp SSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred CCc-CHHHHHHHHHCCCccEEEECHHHHh
Confidence 999 999999999998 999999999975
No 51
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.43 E-value=2.6e-12 Score=126.10 Aligned_cols=219 Identities=15% Similarity=0.144 Sum_probs=139.0
Q ss_pred ceeEcCcccCCceEecccccccccCCh---hhHHHHHHHHHcCCceecCCCCCC--------------CHHH------Hh
Q 017781 62 NTTVLGFKISMPIMIAPTAMQKMAHPE---GEYATARAASAAGTIMTLSSWSTS--------------SVEE------VA 118 (366)
Q Consensus 62 st~l~g~~l~~Pi~iApm~~~~l~~~~---~e~~la~aa~~~G~~~~vs~~~~~--------------~~e~------i~ 118 (366)
..+|.+.++++.|++|||+...- ++ .+..+..-++++|+++++++..+. +.+. +.
T Consensus 14 P~~ig~~~l~NRiv~aPm~~~~a--~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~ 91 (377)
T 2r14_A 14 PLQLGSLSLPNRVIMAPLTRSRT--PDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVV 91 (377)
T ss_dssp CEEETTEEESCSEEECCCCCCCC--TTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEecCCeEECCCcCCcC--CCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHH
Confidence 36788999999999999976431 33 356666777777777776543211 2222 21
Q ss_pred c---cCCCceEEEeeec------------------------------------------CCH------------HHHHHH
Q 017781 119 S---TGPGIRFFQLYVY------------------------------------------KDR------------NVVAQL 141 (366)
Q Consensus 119 ~---~~~~~~~~Qly~~------------------------------------------~d~------------~~~~~~ 141 (366)
+ ....+.++||+-. ..+ +...+.
T Consensus 92 ~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~a 171 (377)
T 2r14_A 92 EAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQA 171 (377)
T ss_dssp HHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHH
Confidence 1 1235678898630 112 345566
Q ss_pred HHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHH
Q 017781 142 VRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQ 221 (366)
Q Consensus 142 l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr 221 (366)
.++++++|+++|.|+..|... .+.|--|. ...+ +..-+ +. +. ....+..+.++.+|
T Consensus 172 A~~a~~aGfDgVEIh~a~GYL-------l~QFlsp~-~N~R------------~D~yG-Gs-le--nR~r~~~eiv~aVr 227 (377)
T 2r14_A 172 AQRAKRAGFDMVEVHAANACL-------PNQFLATG-TNRR------------TDQYG-GS-IE--NRARFPLEVVDAVA 227 (377)
T ss_dssp HHHHHHHTCSEEEEEECTTCH-------HHHHHSTT-TCCC------------CSTTS-SS-HH--HHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCcccch-------HHhccCCc-cccC------------CCccC-cc-hh--hchHHHHHHHHHHH
Confidence 678888999999999876321 11221110 0000 00000 00 11 12345678899999
Q ss_pred HhcCC-CEEEEeccC-----------HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 222 TITKL-PILVKGVLT-----------AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 222 ~~~~~-pv~vK~v~~-----------~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
+.++. ||.+|.... .++ .++|+|+|.+++....+...+ ..++.+.++++.+ ++|||+
T Consensus 228 ~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~--~iPvi~ 304 (377)
T 2r14_A 228 EVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRF--KGGLIY 304 (377)
T ss_dssp HHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHC--CSEEEE
T ss_pred HHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHC--CCCEEE
Confidence 99853 999997532 222 789999999987421111111 1456778888888 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
.||| +++++.++|+.| ||+|++||+++.
T Consensus 305 ~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 305 CGNY-DAGRAQARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp ESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ECCC-CHHHHHHHHHCCCceEEeecHHHHh
Confidence 9999 699999999998 999999999985
No 52
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.42 E-value=5e-12 Score=122.54 Aligned_cols=98 Identities=19% Similarity=0.241 Sum_probs=78.8
Q ss_pred CCCHHHHHHHHHhcCCCEEEEeccC--------HHH--------HHcCCcEEEEcCCCccC--CCCCcc-hHHHHHHHHH
Q 017781 211 SLSWKDVKWLQTITKLPILVKGVLT--------AED--------VQAGAAGIIVSNHGARQ--LDYVPA-TIMALEEVVK 271 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~~pv~vK~v~~--------~~d--------~~aGad~I~vs~~gg~~--~~~~~~-~~~~l~~i~~ 271 (366)
.+..+.++.+|+.++.||.||.... .++ .++|+|+|.|++.+-.. ...++. .++.+.++++
T Consensus 195 r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~ 274 (340)
T 3gr7_A 195 RFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRR 274 (340)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHH
Confidence 4567889999999999999998742 333 88999999998632111 111222 5677888888
Q ss_pred HcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 272 ATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 272 ~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
.+ ++|||+.|||++++++.++|+.| ||+|++||+++.
T Consensus 275 ~~--~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~la 312 (340)
T 3gr7_A 275 EA--DIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLR 312 (340)
T ss_dssp HT--TCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHH
T ss_pred Hc--CCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHh
Confidence 88 79999999999999999999999 999999999985
No 53
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.35 E-value=3.8e-11 Score=118.78 Aligned_cols=148 Identities=15% Similarity=0.067 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHH
Q 017781 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK 215 (366)
Q Consensus 136 ~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 215 (366)
+...+..++|+++|+++|.|+..+... .+.|--|. ...+ +..-+ +.+ . ....+..+
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYL-------l~QFLsp~-~N~R------------tD~yG-Gsl-e--nR~rf~~E 226 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYL-------IDQFLKDG-INDR------------TDEYG-GSL-A--NRCKFITQ 226 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSH-------HHHHHCTT-TCCC------------CSTTS-SSH-H--HHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchH-------HHhccCCc-cCcc------------CCccC-cCh-h--hhhHHHHH
Confidence 355666778889999999999875221 12221110 0000 00000 001 1 12345678
Q ss_pred HHHHHHHhcC-CCEEEEeccC-----------HHH--------HHcC------CcEEEEcCCCccCCCCCc--------c
Q 017781 216 DVKWLQTITK-LPILVKGVLT-----------AED--------VQAG------AAGIIVSNHGARQLDYVP--------A 261 (366)
Q Consensus 216 ~i~~lr~~~~-~pv~vK~v~~-----------~~d--------~~aG------ad~I~vs~~gg~~~~~~~--------~ 261 (366)
.++.+|+.++ .||.+|.... .++ .++| +|+|.+++....+....+ .
T Consensus 227 iv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~ 306 (402)
T 2hsa_B 227 VVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEE 306 (402)
T ss_dssp HHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHH
T ss_pred HHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcc
Confidence 8999999985 4999997632 122 7889 999999874321111111 2
Q ss_pred hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 262 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
.++.+.++++.+ ++|||++||| +++++.++|+.| ||+|++||++|.
T Consensus 307 ~~~~~~~vk~~~--~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~ 353 (402)
T 2hsa_B 307 EARLMRTLRNAY--QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFIS 353 (402)
T ss_dssp HHHHHHHHHHHC--SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred hHHHHHHHHHHC--CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHh
Confidence 456677888888 7999999999 999999999998 999999999985
No 54
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.34 E-value=5.7e-11 Score=115.48 Aligned_cols=98 Identities=17% Similarity=0.233 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHhc--CCCEEEEecc--------CHHH--------HHcCCcEEEEcCCCcc-C--CCCCc-chHHHHHH
Q 017781 211 SLSWKDVKWLQTIT--KLPILVKGVL--------TAED--------VQAGAAGIIVSNHGAR-Q--LDYVP-ATIMALEE 268 (366)
Q Consensus 211 ~~~~~~i~~lr~~~--~~pv~vK~v~--------~~~d--------~~aGad~I~vs~~gg~-~--~~~~~-~~~~~l~~ 268 (366)
.+..+.++.+|+.+ +.||.+|... +.++ .++|+|+|.+++.+-. . ...++ ..++.+.+
T Consensus 203 r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ 282 (349)
T 3hgj_A 203 RFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADA 282 (349)
T ss_dssp HHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHH
Confidence 35678899999999 6899999874 3444 7899999999863211 1 11122 25677888
Q ss_pred HHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 269 VVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 269 i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
+++.+ ++|||+.|||++++++.++|+.| ||+|++||+++.
T Consensus 283 ir~~~--~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 283 VRKRV--GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp HHHHH--CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred HHHHc--CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHh
Confidence 88887 79999999999999999999999 999999999985
No 55
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.30 E-value=2.5e-11 Score=119.07 Aligned_cols=147 Identities=15% Similarity=0.059 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHH
Q 017781 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKD 216 (366)
Q Consensus 137 ~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 216 (366)
...+..++++++|++++.|+..|... .+.|--|. ...+ +..-+ +.. . ....+..+.
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyL-------l~qFlsp~-~N~R------------~D~yG-Gsl-e--nR~r~~~ei 223 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYL-------IDQFMKDQ-VNDR------------SDKYG-GSL-E--NRCRFALEI 223 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSH-------HHHHHCTT-TCCC------------CSTTS-SSH-H--HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchh-------hhhccCCc-ccCC------------CCccC-ccH-H--HhHHHHHHH
Confidence 45666778889999999999876321 11221110 0000 00000 000 1 123456788
Q ss_pred HHHHHHhcCC-CEEEEeccC-----------HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCC
Q 017781 217 VKWLQTITKL-PILVKGVLT-----------AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR 276 (366)
Q Consensus 217 i~~lr~~~~~-pv~vK~v~~-----------~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~ 276 (366)
++.+|+.++. ||.+|.... .++ .++|+|+|.+++....+...+...++.+.++++.+ +
T Consensus 224 v~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~--~ 301 (376)
T 1icp_A 224 VEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY--K 301 (376)
T ss_dssp HHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC--C
T ss_pred HHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc--C
Confidence 9999999853 999998631 112 78999999998642111000111234456777777 7
Q ss_pred ceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 277 IPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 277 i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
+|||+.||| +++++.++|+.| ||+|++||+++.
T Consensus 302 iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 302 GTFIVAGGY-DREDGNRALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp SCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred CCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHh
Confidence 999999999 999999999998 999999999985
No 56
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.30 E-value=3.1e-11 Score=119.97 Aligned_cols=99 Identities=16% Similarity=0.222 Sum_probs=75.7
Q ss_pred CCCHHHHHHHHHhc------CCCEEEEecc----------CHHH--------HH-cCCcEEEEcCCCcc-----CCCCCc
Q 017781 211 SLSWKDVKWLQTIT------KLPILVKGVL----------TAED--------VQ-AGAAGIIVSNHGAR-----QLDYVP 260 (366)
Q Consensus 211 ~~~~~~i~~lr~~~------~~pv~vK~v~----------~~~d--------~~-aGad~I~vs~~gg~-----~~~~~~ 260 (366)
.+..+.++.+|+.+ +.||.+|... +.++ .+ +|+|+|.|++.+.. +...++
T Consensus 222 Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~ 301 (419)
T 3l5a_A 222 RLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGD 301 (419)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSST
T ss_pred HHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCc
Confidence 35678899999987 5799999653 4454 67 99999999875421 111122
Q ss_pred c-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 261 A-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 261 ~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
. .++.+..+++.+++++|||+.|||++++++.++|+. ||+|++||++|.
T Consensus 302 ~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 302 HFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp TTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHH
T ss_pred cccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHH
Confidence 1 234567777777667999999999999999999999 999999999975
No 57
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.27 E-value=1.2e-10 Score=112.73 Aligned_cols=97 Identities=16% Similarity=0.111 Sum_probs=75.8
Q ss_pred CCCHHHHHHHHHhc--CCCEEEEeccC--------HHH--------HHcCCcEEEEcCCCccC--CCCCc-chHHHHHHH
Q 017781 211 SLSWKDVKWLQTIT--KLPILVKGVLT--------AED--------VQAGAAGIIVSNHGARQ--LDYVP-ATIMALEEV 269 (366)
Q Consensus 211 ~~~~~~i~~lr~~~--~~pv~vK~v~~--------~~d--------~~aGad~I~vs~~gg~~--~~~~~-~~~~~l~~i 269 (366)
.+..+.++.+|+.+ +.||.+|...+ .++ .++ +|+|.++..+-.. ....+ ..++.+.++
T Consensus 194 rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~i 272 (343)
T 3kru_A 194 RFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETI 272 (343)
T ss_dssp HHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHH
Confidence 45678999999999 68999998742 444 667 9999997422111 11112 246777888
Q ss_pred HHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 270 VKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 270 ~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
++.+ ++|||++|||++++++.++|+.| ||+|++||++|.
T Consensus 273 r~~~--~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~la 312 (343)
T 3kru_A 273 KKRC--NIKTSAVGLITTQELAEEILSNERADLVALGRELLR 312 (343)
T ss_dssp HHHH--TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHhc--CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhc
Confidence 8888 79999999999999999999998 999999999985
No 58
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.26 E-value=6.7e-11 Score=124.21 Aligned_cols=223 Identities=13% Similarity=0.096 Sum_probs=136.7
Q ss_pred ceeEcCcccCCceEecccccccccCChh-h--HHHHHHHHHcCCceecCCCCCC--------------CHHH------Hh
Q 017781 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG-E--YATARAASAAGTIMTLSSWSTS--------------SVEE------VA 118 (366)
Q Consensus 62 st~l~g~~l~~Pi~iApm~~~~l~~~~~-e--~~la~aa~~~G~~~~vs~~~~~--------------~~e~------i~ 118 (366)
..+|.+.+++++|++|||+...-..+.. + ...-+.-++.|++++++++.+. +.+. +.
T Consensus 8 p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (671)
T 1ps9_A 8 PLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTIT 87 (671)
T ss_dssp CEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHH
T ss_pred CeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHH
Confidence 3578889999999999997532111211 1 2222223356788777543211 1121 21
Q ss_pred c---cCCCceEEEeeec---------------------CCH------------HHHHHHHHHHHHcCCCEEEEecCCCCC
Q 017781 119 S---TGPGIRFFQLYVY---------------------KDR------------NVVAQLVRRAERAGFKAIALTVDTPRL 162 (366)
Q Consensus 119 ~---~~~~~~~~Qly~~---------------------~d~------------~~~~~~l~ra~~~G~~ai~vtvd~p~~ 162 (366)
+ ....+.++||+-. ..+ +...+..++++++||+++-|+..+...
T Consensus 88 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl 167 (671)
T 1ps9_A 88 EAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYL 167 (671)
T ss_dssp HHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSH
T ss_pred HHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchH
Confidence 1 2235789999741 011 345566678888999999998875321
Q ss_pred cchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhc--CCCEEEEecc------
Q 017781 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTIT--KLPILVKGVL------ 234 (366)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~--~~pv~vK~v~------ 234 (366)
.+.|--|. ...+ +..-+ +. +. ....+..+.++.+|+.+ +.||.+|...
T Consensus 168 -------~~qFlsp~-~n~r------------~d~yG-gs-~~--~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~ 223 (671)
T 1ps9_A 168 -------INEFLTLR-TNQR------------SDQWG-GD-YR--NRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVED 223 (671)
T ss_dssp -------HHHHHCTT-TCCC------------CSTTS-SS-HH--HHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTT
T ss_pred -------HHHhCCCc-cCCC------------cCcCC-Cc-HH--HHHHHHHHHHHHHHHHcCCCceEEEEECccccCCC
Confidence 12221110 0000 00000 00 01 12345678899999998 7899999762
Q ss_pred --CHHH--------HHcCCcEEEEcCCCccC------CCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHh
Q 017781 235 --TAED--------VQAGAAGIIVSNHGARQ------LDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 297 (366)
Q Consensus 235 --~~~d--------~~aGad~I~vs~~gg~~------~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalal 297 (366)
+.++ .++|+|+|.+++..... ...++. .++.+.++++.+ ++|||+.|||.+++++.++|+.
T Consensus 224 g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi~~~~~a~~~l~~ 301 (671)
T 1ps9_A 224 GGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV--SLPLVTTNRINDPQVADDILSR 301 (671)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC--SSCEEECSSCCSHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc--CceEEEeCCCCCHHHHHHHHHc
Confidence 3443 78999999998632111 011111 246677777666 7999999999999999999999
Q ss_pred C-cCEEEecHHHHH
Q 017781 298 G-ASGIFIGRPVVY 310 (366)
Q Consensus 298 G-Ad~V~igr~~l~ 310 (366)
| ||+|++||+++.
T Consensus 302 g~aD~V~~gR~~l~ 315 (671)
T 1ps9_A 302 GDADMVSMARPFLA 315 (671)
T ss_dssp TSCSEEEESTHHHH
T ss_pred CCCCEEEeCHHHHh
Confidence 8 999999999985
No 59
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.26 E-value=3.9e-11 Score=127.30 Aligned_cols=222 Identities=12% Similarity=0.100 Sum_probs=135.9
Q ss_pred eeEcCcccCCceEecccccccc-cCChhhHHHHHHHHHcCCceecCCCCC-------C--------CHHH------Hhc-
Q 017781 63 TTVLGFKISMPIMIAPTAMQKM-AHPEGEYATARAASAAGTIMTLSSWST-------S--------SVEE------VAS- 119 (366)
Q Consensus 63 t~l~g~~l~~Pi~iApm~~~~l-~~~~~e~~la~aa~~~G~~~~vs~~~~-------~--------~~e~------i~~- 119 (366)
.+|.+.+++++|++|||+...- ..|......-+.-++.|+++++++..+ . +.+. +.+
T Consensus 13 ~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (729)
T 1o94_A 13 IQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDE 92 (729)
T ss_dssp EEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHH
T ss_pred eeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHH
Confidence 6788999999999999965321 112111122222336677777643211 0 1221 111
Q ss_pred --cCCCceEEEeeecC-----------------------C---------------HHHHHHHHHHHHHcCCCEEEEecCC
Q 017781 120 --TGPGIRFFQLYVYK-----------------------D---------------RNVVAQLVRRAERAGFKAIALTVDT 159 (366)
Q Consensus 120 --~~~~~~~~Qly~~~-----------------------d---------------~~~~~~~l~ra~~~G~~ai~vtvd~ 159 (366)
....+.++||+-.. + .+...+..++|+++|++++.|+..+
T Consensus 93 vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~ 172 (729)
T 1o94_A 93 VHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAH 172 (729)
T ss_dssp HHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECT
T ss_pred HHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccc
Confidence 12356889996410 0 1345566778889999999999876
Q ss_pred CCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhc--CCCEEEEecc---
Q 017781 160 PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTIT--KLPILVKGVL--- 234 (366)
Q Consensus 160 p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~--~~pv~vK~v~--- 234 (366)
.. +.+.|--|. ..-+ ++.-+ +.+ . ....+..+.++.+|+.+ +.||.+|...
T Consensus 173 gy-------Ll~qFlsp~-~N~R------------~D~yG-Gs~-e--nR~r~~~eiv~avr~~vg~~~pv~vrls~~~~ 228 (729)
T 1o94_A 173 SY-------LPLQFLNPY-YNKR------------TDKYG-GSL-E--NRARFWLETLEKVKHAVGSDCAIATRFGVDTV 228 (729)
T ss_dssp TC-------HHHHHHCTT-TCCC------------CSTTS-SSH-H--HHTHHHHHHHHHHHHHHTTTSEEEEEEEEECS
T ss_pred ch-------HHHHhcCCc-cCCC------------cCcCC-CCH-H--HHhHHHHHHHHHHHHHhCCCceEEEEEccccC
Confidence 32 122221110 0000 00000 011 1 12346778999999999 7899999752
Q ss_pred ------C-HHH-------HHcCCcEEEEcCCCc-----c---CCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHH
Q 017781 235 ------T-AED-------VQAGAAGIIVSNHGA-----R---QLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDV 291 (366)
Q Consensus 235 ------~-~~d-------~~aGad~I~vs~~gg-----~---~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv 291 (366)
+ .++ .+.|+|.+.+++.+. . +....+. .+....++++.+ ++|||+.|||.+++++
T Consensus 229 ~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a 306 (729)
T 1o94_A 229 YGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVS--KKPVLGVGRYTDPEKM 306 (729)
T ss_dssp SCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTC--SSCEECCSCCCCHHHH
T ss_pred cCCCCCCchHHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHC--CCEEEEeCCCCCHHHH
Confidence 2 233 555899999876321 0 0111111 356677787777 8999999999999999
Q ss_pred HHHHHhC-cCEEEecHHHHH
Q 017781 292 FKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 292 ~kalalG-Ad~V~igr~~l~ 310 (366)
.++|+.| ||+|++||++|.
T Consensus 307 ~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 307 IEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp HHHHHTTSCSBEEESHHHHH
T ss_pred HHHHHCCCCCEEEeCchhhc
Confidence 9999998 999999999975
No 60
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.20 E-value=3.2e-10 Score=119.50 Aligned_cols=223 Identities=13% Similarity=0.039 Sum_probs=136.7
Q ss_pred ceeEcCcccCCceEecccccccccCChhh--HHHHHHHHHcCCceecCCCCCC---------------CHH------HHh
Q 017781 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGE--YATARAASAAGTIMTLSSWSTS---------------SVE------EVA 118 (366)
Q Consensus 62 st~l~g~~l~~Pi~iApm~~~~l~~~~~e--~~la~aa~~~G~~~~vs~~~~~---------------~~e------~i~ 118 (366)
..+|.+.+++++|++|||+... ..+..+ .......++-|+++++++..+. +.+ ++.
T Consensus 17 p~~ig~~~l~NRiv~apm~~~~-~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (690)
T 3k30_A 17 PVQIGPFTTKNRFYQVPHCNGM-GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIA 95 (690)
T ss_dssp CCEETTEECSSSEEECCCCCSC-SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHH
T ss_pred CeeECCEEECCCeEeCCCcCCC-CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHH
Confidence 3678899999999999996432 223222 2344455677888877543211 111 111
Q ss_pred c---cCCCceEEEeeecC-------------------------C---------------HHHHHHHHHHHHHcCCCEEEE
Q 017781 119 S---TGPGIRFFQLYVYK-------------------------D---------------RNVVAQLVRRAERAGFKAIAL 155 (366)
Q Consensus 119 ~---~~~~~~~~Qly~~~-------------------------d---------------~~~~~~~l~ra~~~G~~ai~v 155 (366)
+ ....+.++||+-.. + .+...+..++|+++||+++.|
T Consensus 96 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVei 175 (690)
T 3k30_A 96 DAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYV 175 (690)
T ss_dssp HHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 1 12356889997200 0 134556667888999999999
Q ss_pred ecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhc--CCCEEEEec
Q 017781 156 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTIT--KLPILVKGV 233 (366)
Q Consensus 156 tvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~--~~pv~vK~v 233 (366)
+..++.. +.+.|--|. ..-+ ++.-+ +.. . ....+..+.++.+|+.+ +.||.+|..
T Consensus 176 h~a~gy~------L~~qFlsp~-~N~R------------~D~yG-Gs~-e--nR~r~~~ei~~avr~~~g~~~~v~~r~s 232 (690)
T 3k30_A 176 YGAHGYS------GVHHFLSKR-YNQR------------TDEYG-GSL-E--NRMRLLRELLEDTLDECAGRAAVACRIT 232 (690)
T ss_dssp EECTTCS------HHHHHHCTT-TCCC------------CSTTS-SSH-H--HHTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred cccccch------HHHHhCCCc-cCCC------------ccccC-CCH-H--HHHHHHHHHHHHHHHHhCCCceEEEEEC
Confidence 9876540 122221111 0000 00000 011 1 12345678899999998 578999974
Q ss_pred c--------CHHH-------HHcCCcEEEEcCCCc---cC--CCCCc-chHHHHHHHHHHcCCCceEEEecCCCCHHHHH
Q 017781 234 L--------TAED-------VQAGAAGIIVSNHGA---RQ--LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVF 292 (366)
Q Consensus 234 ~--------~~~d-------~~aGad~I~vs~~gg---~~--~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~ 292 (366)
. +.++ .+.|+|.|.|+..+- .. ..... ..++...++++.+ ++|||+.|||++++++.
T Consensus 233 ~~~~~~~g~~~~~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~ 310 (690)
T 3k30_A 233 VEEEIDGGITREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT--TKPVVGVGRFTSPDAMV 310 (690)
T ss_dssp CCCCSTTSCCHHHHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC--SSCEEECSCCCCHHHHH
T ss_pred ccccCCCCCCHHHHHHHHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHHc--CCeEEEeCCCCCHHHHH
Confidence 2 3444 555899999986321 00 11111 1245566666666 79999999999999999
Q ss_pred HHHHhC-cCEEEecHHHHH
Q 017781 293 KALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 293 kalalG-Ad~V~igr~~l~ 310 (366)
++|+.| ||+|++||++|.
T Consensus 311 ~~l~~g~~d~v~~gR~~~~ 329 (690)
T 3k30_A 311 RQIKAGILDLIGAARPSIA 329 (690)
T ss_dssp HHHHTTSCSEEEESHHHHH
T ss_pred HHHHCCCcceEEEcHHhHh
Confidence 999998 999999999975
No 61
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.17 E-value=1.3e-09 Score=99.90 Aligned_cols=166 Identities=15% Similarity=0.038 Sum_probs=107.8
Q ss_pred hHHHHHHHHHcCCceecCCCCCCCHHHHhccCCCceEEEe---eec----CCHHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 017781 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQL---YVY----KDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (366)
Q Consensus 90 e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~~~~~~Ql---y~~----~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~ 162 (366)
-..+|+++.+.|...+. ..+...++++++....|.+-+. |.. -++ ..+.++.+.++|++.+.+..-. .
T Consensus 38 ~~~~A~a~~~~Ga~~i~-~~~~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~--~~~~i~~~~~~Gad~V~l~~~~--~ 112 (232)
T 3igs_A 38 VAAMALAAEQAGAVAVR-IEGIDNLRMTRSLVSVPIIGIIKRDLDESPVRITP--FLDDVDALAQAGAAIIAVDGTA--R 112 (232)
T ss_dssp HHHHHHHHHHTTCSEEE-EESHHHHHHHHTTCCSCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEECCS--S
T ss_pred HHHHHHHHHHCCCeEEE-ECCHHHHHHHHHhcCCCEEEEEeecCCCcceEeCc--cHHHHHHHHHcCCCEEEECccc--c
Confidence 45899999999988653 2222233444544433432111 100 011 1234667788999988763210 0
Q ss_pred cchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH----
Q 017781 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED---- 238 (366)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d---- 238 (366)
.+|....+.++.+++. ++++++ .+.+.++
T Consensus 113 ---------------------------------------------~~p~~l~~~i~~~~~~-g~~v~~-~v~t~eea~~a 145 (232)
T 3igs_A 113 ---------------------------------------------QRPVAVEALLARIHHH-HLLTMA-DCSSVDDGLAC 145 (232)
T ss_dssp ---------------------------------------------CCSSCHHHHHHHHHHT-TCEEEE-ECCSHHHHHHH
T ss_pred ---------------------------------------------CCHHHHHHHHHHHHHC-CCEEEE-eCCCHHHHHHH
Confidence 0122233457777764 666655 4567776
Q ss_pred HHcCCcEEEEcCCCccCC-CCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQL-DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~-~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|.|.+.++|.+.. ....+.++.++++++. ++|||++|||.+++|+.+++++|||+|++|+.++.
T Consensus 146 ~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~ 215 (232)
T 3igs_A 146 QRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA---GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITR 215 (232)
T ss_dssp HHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred HhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcC
Confidence 899999997766653221 1234578888888764 79999999999999999999999999999999874
No 62
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.17 E-value=9.4e-10 Score=99.65 Aligned_cols=93 Identities=18% Similarity=0.248 Sum_probs=74.5
Q ss_pred HHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccC--CCC--CcchHHHHHHHHHHcCCCceEEEecC
Q 017781 214 WKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQ--LDY--VPATIMALEEVVKATQGRIPVFLDGG 284 (366)
Q Consensus 214 ~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~--~~~--~~~~~~~l~~i~~~~~~~i~vi~~GG 284 (366)
.+.++++|+.+ +.+++ ..+.+.++ .++|+|+|.++++|.+. .+. ..+.++.+.++++.+ ++||+++||
T Consensus 107 ~~~i~~~~~~~~~~~v~-~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GG 183 (223)
T 1y0e_A 107 DELVSYIRTHAPNVEIM-ADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGN 183 (223)
T ss_dssp HHHHHHHHHHCTTSEEE-EECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESS
T ss_pred HHHHHHHHHhCCCceEE-ecCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEecC
Confidence 45689999987 45554 46677776 88999999887765432 122 345678888998887 799999999
Q ss_pred CCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~~l 309 (366)
|++++|+.+++++|||+|++|++++
T Consensus 184 I~~~~~~~~~~~~Gad~v~vG~al~ 208 (223)
T 1y0e_A 184 VITPDMYKRVMDLGVHCSVVGGAIT 208 (223)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEEChHHc
Confidence 9999999999999999999999965
No 63
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.17 E-value=6.9e-10 Score=101.65 Aligned_cols=166 Identities=16% Similarity=0.047 Sum_probs=108.1
Q ss_pred hHHHHHHHHHcCCceecCCCCCCCHHHHhccCCCceEE---Eeeec----CCHHHHHHHHHHHHHcCCCEEEEecCCCCC
Q 017781 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFF---QLYVY----KDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (366)
Q Consensus 90 e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~~~~~~---Qly~~----~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~ 162 (366)
-..+|+++.+.|...+-. .+...++++++....|.+- +-|.. -++ +.+.++.+.++|++.+.+..-. .
T Consensus 38 ~~~~A~a~~~~Ga~~i~~-~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~--~~~~i~~~~~aGad~I~l~~~~--~ 112 (229)
T 3q58_A 38 VAAMAQAAASAGAVAVRI-EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITP--YLQDVDALAQAGADIIAFDASF--R 112 (229)
T ss_dssp HHHHHHHHHHTTCSEEEE-ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEECCS--S
T ss_pred HHHHHHHHHHCCCcEEEE-CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCc--cHHHHHHHHHcCCCEEEECccc--c
Confidence 458999999999886532 2222234444444334331 21111 011 1234667788999988763210 0
Q ss_pred cchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH----
Q 017781 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAED---- 238 (366)
Q Consensus 163 g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d---- 238 (366)
.+|....+.++.+++. +.++++ .+.+.++
T Consensus 113 ---------------------------------------------~~p~~l~~~i~~~~~~-g~~v~~-~v~t~eea~~a 145 (229)
T 3q58_A 113 ---------------------------------------------SRPVDIDSLLTRIRLH-GLLAMA-DCSTVNEGISC 145 (229)
T ss_dssp ---------------------------------------------CCSSCHHHHHHHHHHT-TCEEEE-ECSSHHHHHHH
T ss_pred ---------------------------------------------CChHHHHHHHHHHHHC-CCEEEE-ecCCHHHHHHH
Confidence 0122233557777764 666555 4667776
Q ss_pred HHcCCcEEEEcCCCccCC-CCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQL-DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~-~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|.|.+.++|.+.. ....+.++.++++++. ++|||++|||.+++|+.+++++|||+|++|+.++.
T Consensus 146 ~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 146 HQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA---GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITR 215 (229)
T ss_dssp HHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT---TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHC
T ss_pred HhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcC
Confidence 899999998766653221 1234578888888753 79999999999999999999999999999998874
No 64
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.08 E-value=2.1e-09 Score=98.19 Aligned_cols=90 Identities=24% Similarity=0.264 Sum_probs=71.8
Q ss_pred CHHHHHHHHHhcCCCEEEEec-----cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 213 SWKDVKWLQTITKLPILVKGV-----LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v-----~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
..+.++++++.++ |+++|.+ .+.++ .++|+|+|..+ +|. ..+..+++.+..+++.+++++||
T Consensus 104 ~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~ts-tg~---~~gga~~~~i~~v~~~v~~~ipV 178 (225)
T 1mzh_A 104 VVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTS-TGF---APRGTTLEEVRLIKSSAKGRIKV 178 (225)
T ss_dssp HHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECC-CSC---SSSCCCHHHHHHHHHHHTTSSEE
T ss_pred HHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEC-CCC---CCCCCCHHHHHHHHHHhCCCCcE
Confidence 4456899999888 9999984 34443 88999999544 332 12335788888888888778999
Q ss_pred EEecCCCCHHHHHHHHHhCcCEEEecHH
Q 017781 280 FLDGGVRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalGAd~V~igr~ 307 (366)
+++|||++++|+.+++.+|||.|++++.
T Consensus 179 ia~GGI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 179 KASGGIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred EEECCCCCHHHHHHHHHhCchHHHHccH
Confidence 9999999999999999999998888764
No 65
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=99.07 E-value=7.5e-10 Score=127.02 Aligned_cols=189 Identities=14% Similarity=0.166 Sum_probs=122.7
Q ss_pred eeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHh-------ccC--CCceEEEeeecC
Q 017781 63 TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA-------STG--PGIRFFQLYVYK 133 (366)
Q Consensus 63 t~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~-------~~~--~~~~~~Qly~~~ 133 (366)
|+++| + .||+.+||+... .+..++.++.++|....+...+..+.|++. +.. +.++.+++....
T Consensus 584 t~llg-~--~PIi~~gM~~~~-----~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~ 655 (2051)
T 2uv8_G 584 SKLIG-R--PPLLVPGMTPCT-----VSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEKGSTFGINLIYVN 655 (2051)
T ss_dssp HHHHS-S--CSEEECCCHHHH-----TCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTC
T ss_pred HHhhC-c--cceecCCCcccc-----ccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 44678 3 799999997322 256799999999999888444444444432 222 256777764332
Q ss_pred CH--HHHHHHHHHHHHcCCCE--EEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccC
Q 017781 134 DR--NVVAQLVRRAERAGFKA--IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (366)
Q Consensus 134 d~--~~~~~~l~ra~~~G~~a--i~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (366)
.. ..-.++++.+.+.|+.. +.++.+.|
T Consensus 656 ~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p------------------------------------------------- 686 (2051)
T 2uv8_G 656 PFMLQWGIPLIKELRSKGYPIQFLTIGAGVP------------------------------------------------- 686 (2051)
T ss_dssp TTHHHHHHHHHHHHHHTTCSEEEEEEESSCC-------------------------------------------------
T ss_pred hhhhhhhHHHHHHHHHcCCCcceEEecCCCC-------------------------------------------------
Confidence 21 11227788888888877 43322211
Q ss_pred CCCCHHH-HHHHHHhcCCCEEEEeccCHHH-------HHcCCcEE---EEcCC--CccC--CCCCcchHHHHHHHHHHcC
Q 017781 210 RSLSWKD-VKWLQTITKLPILVKGVLTAED-------VQAGAAGI---IVSNH--GARQ--LDYVPATIMALEEVVKATQ 274 (366)
Q Consensus 210 ~~~~~~~-i~~lr~~~~~pv~vK~v~~~~d-------~~aGad~I---~vs~~--gg~~--~~~~~~~~~~l~~i~~~~~ 274 (366)
.++. ++.+.+ ++++++.....+... .++|+|++ ++.|. ||+. .+...+++..++++++.+
T Consensus 687 ---~~~~~~~~i~~-lG~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~- 761 (2051)
T 2uv8_G 687 ---SLEVASEYIET-LGLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHP- 761 (2051)
T ss_dssp ---CHHHHHHHHHH-SCCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCT-
T ss_pred ---chhhHHHHHHH-cCCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcC-
Confidence 2222 223333 378877654333322 78899993 33332 3432 123355667789998887
Q ss_pred CCceEEEecCCCCHHHHHHHH-----------HhCcCEEEecHHHHHHhhh
Q 017781 275 GRIPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSLAA 314 (366)
Q Consensus 275 ~~i~vi~~GGI~~~~dv~kal-----------alGAd~V~igr~~l~~l~~ 314 (366)
++|||+.|||.+|.+++.|| +||||+|+||+.||-+-.+
T Consensus 762 -~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea 811 (2051)
T 2uv8_G 762 -NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEV 811 (2051)
T ss_dssp -TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTS
T ss_pred -CceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCccc
Confidence 89999999999999999999 8999999999999876444
No 66
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.03 E-value=1.1e-09 Score=106.83 Aligned_cols=97 Identities=18% Similarity=0.131 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHhc--CCCEEEEecc---------CHHH--------HHcCCcEEEEcCCCccC---CCCCc-chHHHHHH
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGVL---------TAED--------VQAGAAGIIVSNHGARQ---LDYVP-ATIMALEE 268 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v~---------~~~d--------~~aGad~I~vs~~gg~~---~~~~~-~~~~~l~~ 268 (366)
+..+.++.+|+.+ +.||.+|... +.++ .++|+|+|.+++.+-.. ...++ ..++.+..
T Consensus 210 ~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ 289 (363)
T 3l5l_A 210 FLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAER 289 (363)
T ss_dssp HHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHH
Confidence 4678899999998 5899999763 2233 78999999998742111 11222 24677788
Q ss_pred HHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 269 VVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 269 i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
+++.+ ++|||+.|||++++++.++|+.| ||+|++||+++.
T Consensus 290 ir~~~--~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 290 VRREA--KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp HHHHH--TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHHc--CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHh
Confidence 88888 79999999999999999999999 999999999986
No 67
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.99 E-value=5.2e-08 Score=90.98 Aligned_cols=195 Identities=13% Similarity=0.108 Sum_probs=110.5
Q ss_pred ceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCcee-cCC-CC---CCCHHHHhccCC---CceEEEeeecC
Q 017781 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSS-WS---TSSVEEVASTGP---GIRFFQLYVYK 133 (366)
Q Consensus 62 st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~-vs~-~~---~~~~e~i~~~~~---~~~~~Qly~~~ 133 (366)
.++|.|++|.+|++++.-+. |+.+ .+.++..+.|+-++ ++- .+ ..+++++.+..+ .+.+.+.....
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~-----p~~~-~~~~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~~~~~~~~pn~~~~~ 76 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKY-----PSFD-IQKEAVAVSESDILTFAVRRMNIFEASQPNFLEQLDLSKYTLLPNTAGAS 76 (264)
T ss_dssp CEEETTEEESCCEEEECSCS-----SCHH-HHHHHHHHHTCSEEEEETTSSTTC-------CTTCCGGGSEEEEECTTCS
T ss_pred CeEECCEEecCCCEEEecCC-----CCHH-HHHHHHHHcCCeEEEEcccccccCCCCHHHHHHHHHhcCCeEcCCccccC
Confidence 46799999999999998654 4333 33467777787655 221 11 123344433322 22223432224
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 213 (366)
+.+.....++.++++|...+ +.++.... .|. .....
T Consensus 77 ~~~~~~~f~~~a~~agg~~~-i~l~i~~d------------~~~-------------------------------~~~e~ 112 (264)
T 1xm3_A 77 TAEEAVRIARLAKASGLCDM-IKVEVIGC------------SRS-------------------------------LLPDP 112 (264)
T ss_dssp SHHHHHHHHHHHHHTTCCSS-EEECCBCC------------TTT-------------------------------CCBCH
T ss_pred CHHHHHHHHHHHHHcCCCCe-EEEeecCC------------Ccc-------------------------------cccch
Confidence 44443455666777643322 22332100 000 00111
Q ss_pred HHHHHHHHHhc--CCCEEEEeccCHHH----HHcCCcEEEEcCC-CccCCCCCcchHHHHHHHHHHcCCCceEEEecCCC
Q 017781 214 WKDVKWLQTIT--KLPILVKGVLTAED----VQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 286 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v~~~~d----~~aGad~I~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~ 286 (366)
.+.++..++.+ ++.++.-...+.+. .++|+|+|...+. .|.. .+....+.+..+++.. ++||++.|||+
T Consensus 113 ~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~--~~~~~~~~l~~i~~~~--~iPviv~gGI~ 188 (264)
T 1xm3_A 113 VETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSG--QGILNPLNLSFIIEQA--KVPVIVDAGIG 188 (264)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCC--CCCSCHHHHHHHHHHC--SSCBEEESCCC
T ss_pred HHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCC--CCCCCHHHHHHHHhcC--CCCEEEEeCCC
Confidence 23455565543 44555444456555 7889999944221 1221 1223466788887765 89999999999
Q ss_pred CHHHHHHHHHhCcCEEEecHHHHH
Q 017781 287 RGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~igr~~l~ 310 (366)
+++|+.+++++|||+|.+|++++.
T Consensus 189 t~eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 189 SPKDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp SHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CHHHHHHHHHcCCCEEEEcHHHhC
Confidence 999999999999999999999865
No 68
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=98.93 E-value=3.9e-09 Score=102.88 Aligned_cols=89 Identities=18% Similarity=0.052 Sum_probs=71.5
Q ss_pred CCCHHHHHHHHHhcC-CCEEEEeccC-----------HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHH
Q 017781 211 SLSWKDVKWLQTITK-LPILVKGVLT-----------AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVV 270 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~-~pv~vK~v~~-----------~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~ 270 (366)
.+..+.++.+|+.++ -||.+|.... .++ .++|+|+|.+++.. .++ +.+.+++
T Consensus 204 rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik 275 (362)
T 4ab4_A 204 RLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE-----ADD---SIGPLIK 275 (362)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC-----CTT---CCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC-----CCH---HHHHHHH
Confidence 356788999999984 3999997642 222 78999999998743 122 3456777
Q ss_pred HHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 271 KATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 271 ~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
+.+ ++|||+.||| +++++.++|+.| ||+|++||+++.
T Consensus 276 ~~~--~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 276 EAF--GGPYIVNERF-DKASANAALASGKADAVAFGVPFIA 313 (362)
T ss_dssp HHH--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHC--CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 777 7899999999 999999999998 999999999986
No 69
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.93 E-value=2.8e-08 Score=90.62 Aligned_cols=165 Identities=17% Similarity=0.169 Sum_probs=106.1
Q ss_pred hHHHHHHHHHcCCceecCCCCCCCHHHHhccCCCceEEE----------eeecCCHHHHHHHHHHHHHcCCCEEEEecCC
Q 017781 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQ----------LYVYKDRNVVAQLVRRAERAGFKAIALTVDT 159 (366)
Q Consensus 90 e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~~~~~~Q----------ly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~ 159 (366)
-..+++++.+.|+..+.- .+...++.+++....|. +. ++... ..+.++.+.++|++.+.++...
T Consensus 38 ~~~~a~~~~~~G~~~i~~-~~~~~i~~i~~~~~~p~-i~~~~~~~~~~~~~i~~----~~~~i~~~~~~Gad~V~l~~~~ 111 (234)
T 1yxy_A 38 MPLMAKAAQEAGAVGIRA-NSVRDIKEIQAITDLPI-IGIIKKDYPPQEPFITA----TMTEVDQLAALNIAVIAMDCTK 111 (234)
T ss_dssp HHHHHHHHHHHTCSEEEE-ESHHHHHHHHTTCCSCE-EEECBCCCTTSCCCBSC----SHHHHHHHHTTTCSEEEEECCS
T ss_pred HHHHHHHHHHCCCcEeec-CCHHHHHHHHHhCCCCE-EeeEcCCCCccccccCC----hHHHHHHHHHcCCCEEEEcccc
Confidence 468999999999876531 11122344544443332 22 12111 2345677888999988765421
Q ss_pred CCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhc-CCCEEEEeccCHHH
Q 017781 160 PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTIT-KLPILVKGVLTAED 238 (366)
Q Consensus 160 p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~-~~pv~vK~v~~~~d 238 (366)
-. -| +.....+.++.+|+.+ +.++++ .+.+.++
T Consensus 112 ~~-------------~~--------------------------------~~~~~~~~i~~i~~~~~~~~v~~-~~~t~~e 145 (234)
T 1yxy_A 112 RD-------------RH--------------------------------DGLDIASFIRQVKEKYPNQLLMA-DISTFDE 145 (234)
T ss_dssp SC-------------CT--------------------------------TCCCHHHHHHHHHHHCTTCEEEE-ECSSHHH
T ss_pred cC-------------CC--------------------------------CCccHHHHHHHHHHhCCCCeEEE-eCCCHHH
Confidence 00 00 0012346788899877 556554 4566666
Q ss_pred ----HHcCCcEE--EEcCCC-ccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 ----VQAGAAGI--IVSNHG-ARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ----~~aGad~I--~vs~~g-g~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|+| .+.+.. +.+ ....+.++.+.++++. ++||+++|||++.+|+.+++++|||+|++|++++.
T Consensus 146 a~~a~~~Gad~i~~~v~g~~~~~~-~~~~~~~~~i~~~~~~---~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 146 GLVAHQAGIDFVGTTLSGYTPYSR-QEAGPDVALIEALCKA---GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITR 220 (234)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSC-CSSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHC
T ss_pred HHHHHHcCCCEEeeeccccCCCCc-CCCCCCHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhC
Confidence 89999999 455432 221 1223467778877764 69999999999999999999999999999998753
No 70
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=98.92 E-value=5e-09 Score=102.07 Aligned_cols=89 Identities=13% Similarity=-0.013 Sum_probs=71.7
Q ss_pred CCCHHHHHHHHHhcCC-CEEEEeccC-----------HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHH
Q 017781 211 SLSWKDVKWLQTITKL-PILVKGVLT-----------AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVV 270 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~~-pv~vK~v~~-----------~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~ 270 (366)
.+..+.++.+|+.++. ||.+|.... .++ .++|+|+|.+++.. .++ +.+.+++
T Consensus 212 rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik 283 (361)
T 3gka_A 212 RLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF-----GGD---AIGQQLK 283 (361)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-----STT---CCHHHHH
T ss_pred HHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC-----CCH---HHHHHHH
Confidence 4567889999999843 999997642 222 78999999998743 122 3456777
Q ss_pred HHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 271 KATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 271 ~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
+.+ ++|||+.||| +++++.++|+.| ||+|++||+++.
T Consensus 284 ~~~--~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 284 AAF--GGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIA 321 (361)
T ss_dssp HHH--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHc--CCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 777 7899999999 999999999998 999999999986
No 71
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.85 E-value=3.4e-07 Score=85.02 Aligned_cols=70 Identities=27% Similarity=0.316 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhh-cCHHHHHHHHHHHHHHHHH
Q 017781 262 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA-EGEKGVRRVLEMLREEFEL 333 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~-~G~~gv~~~~~~l~~el~~ 333 (366)
..+.+.++++.. ++||++.|||++++++.+++.+|||+|.+|+++...... ..++...+.+..+.++|+.
T Consensus 189 ~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~~GAdgvvVGSai~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (262)
T 1rd5_A 189 VESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKN 259 (262)
T ss_dssp HHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHSSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHHcCCCEEEEChHHHhHHHhccChhHHHHHHHHHHHHHHH
Confidence 445777887776 799999999999999999999999999999999876532 2223222344455555544
No 72
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.82 E-value=3.6e-08 Score=90.62 Aligned_cols=195 Identities=14% Similarity=0.164 Sum_probs=113.3
Q ss_pred ceeEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCC--C----CCHHHHhccCCCceEEEeeec---
Q 017781 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWS--T----SSVEEVASTGPGIRFFQLYVY--- 132 (366)
Q Consensus 62 st~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~--~----~~~e~i~~~~~~~~~~Qly~~--- 132 (366)
..+|.|++|..-+++.-=-+ + -...+.++....|+-++.=... + ...+.+.+..+. .-+.+-++
T Consensus 10 ~l~i~~~~f~SRl~~Gtgky-----~-~~~~~~~a~~asg~e~vtva~rR~~~~~~~~~~~~~~~i~~-~~~~~lpNTag 82 (265)
T 1wv2_A 10 PFVIAGRTYGSRLLVGTGKY-----K-DLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPP-DRYTILPNTAG 82 (265)
T ss_dssp CEEETTEEESCCEEECCSCS-----S-SHHHHHHHHHHSCCSEEEEEGGGCCC-------------CT-TTSEEEEECTT
T ss_pred CeEECCEEeecceEEecCCC-----C-CHHHHHHHHHHhCCCeEEEEEEeeccccCCCcchHHhhhhh-cCCEECCcCCC
Confidence 37899999999999865221 1 1346777778888877631110 1 112333333221 01222222
Q ss_pred -CCHHHHHHHHHHHHH-c-CCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccC
Q 017781 133 -KDRNVVAQLVRRAER-A-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (366)
Q Consensus 133 -~d~~~~~~~l~ra~~-~-G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (366)
.+.+..-...+-+++ + |-+.+-+-|-.- + .+.+ .|
T Consensus 83 ~~ta~eAv~~a~lare~~~~~~~iKlEv~~d----~------~~ll--------------------------------pD 120 (265)
T 1wv2_A 83 CYDAVEAVRTCRLARELLDGHNLVKLEVLAD----Q------KTLF--------------------------------PN 120 (265)
T ss_dssp CCSHHHHHHHHHHHHTTTTSCCEEEECCBSC----T------TTCC--------------------------------BC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEEEeecC----c------cccC--------------------------------cC
Confidence 333333344455666 4 445544443211 0 0101 12
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCC-CccCCCCCcchHHHHHHHHHHcCCCceEEEecC
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGG 284 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GG 284 (366)
+..+.+..+.+.+. +..++.-...++.. .++|+++|...+. -|. ..+..+++.|..+++.. ++|||++||
T Consensus 121 ~~~tv~aa~~L~~~-Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGs--G~Gi~~~~lI~~I~e~~--~vPVI~eGG 195 (265)
T 1wv2_A 121 VVETLKAAEQLVKD-GFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGS--GLGICNPYNLRIILEEA--KVPVLVDAG 195 (265)
T ss_dssp HHHHHHHHHHHHTT-TCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTC--CCCCSCHHHHHHHHHHC--SSCBEEESC
T ss_pred HHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCC--CCCcCCHHHHHHHHhcC--CCCEEEeCC
Confidence 22344555555543 55555445556654 8999999976443 121 12456788899898866 899999999
Q ss_pred CCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
|.+++|+.+++.+|||+|++|+.+..
T Consensus 196 I~TPsDAa~AmeLGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 196 VGTASDAAIAMELGCEAVLMNTAIAH 221 (265)
T ss_dssp CCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred CCCHHHHHHHHHcCCCEEEEChHHhC
Confidence 99999999999999999999998864
No 73
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.81 E-value=1.4e-07 Score=88.01 Aligned_cols=149 Identities=15% Similarity=0.171 Sum_probs=95.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCC--ccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP--FLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
+.+.+.+.++.++++|++.|-+.+ |.. -|. |.... ......+.......
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgi--PfS------------DP~aDGp~Iq---------------~a~~~AL~~G~~~~ 80 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGF--PFS------------DPLADGPVIQ---------------GANLRSLAAGTTSS 80 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEEC--CCS------------CCTTCCHHHH---------------HHHHHHHHTTCCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECC--CCC------------CCCCCCHHHH---------------HHHHHHHHcCCCHH
Confidence 448899999999999999987643 321 110 00000 01111222111111
Q ss_pred CCHHHHHHHHHh-cCCCEEEEeccCH------HH-----HHcCCcEEEEcCCCcc------------C------------
Q 017781 212 LSWKDVKWLQTI-TKLPILVKGVLTA------ED-----VQAGAAGIIVSNHGAR------------Q------------ 255 (366)
Q Consensus 212 ~~~~~i~~lr~~-~~~pv~vK~v~~~------~d-----~~aGad~I~vs~~gg~------------~------------ 255 (366)
..++.++++|+. .++|+++-+-.++ +. .++|+|++++..-.-. .
T Consensus 81 ~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~ 160 (267)
T 3vnd_A 81 DCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNAD 160 (267)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCC
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCC
Confidence 235778999987 7899888754333 33 8999999887531100 0
Q ss_pred -------------------CC--CC-c-----chHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHH
Q 017781 256 -------------------LD--YV-P-----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 256 -------------------~~--~~-~-----~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~ 308 (366)
.. .| . ...+.+.++++.. ++||++.|||++++++.+++..|||+|.+|+++
T Consensus 161 ~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSai 238 (267)
T 3vnd_A 161 ADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGAISGSAV 238 (267)
T ss_dssp HHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHH
Confidence 00 11 1 1235566666554 799999999999999999999999999999999
Q ss_pred HHHhh
Q 017781 309 VYSLA 313 (366)
Q Consensus 309 l~~l~ 313 (366)
+..+.
T Consensus 239 v~~i~ 243 (267)
T 3vnd_A 239 VKIIE 243 (267)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87664
No 74
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.79 E-value=1.9e-07 Score=87.42 Aligned_cols=150 Identities=18% Similarity=0.224 Sum_probs=96.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCC--ccccccccccccCCCccccchhhHHHhhhccCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP--FLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR 210 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 210 (366)
.+.+.+.++++.++++|++.|-+.+ |.. -|. |.+ +. .+....+......
T Consensus 31 P~~~~~~~~~~~l~~~GaD~iElGi--PfS------------DP~aDGpv-----------Iq----~a~~rAL~~G~~~ 81 (271)
T 3nav_A 31 PNPEQSLAIMQTLIDAGADALELGM--PFS------------DPLADGPT-----------IQ----GANLRALAAKTTP 81 (271)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEEC--CCC------------CGGGCCSH-----------HH----HHHHHHHHTTCCH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECC--CCC------------CCCCCCHH-----------HH----HHHHHHHHcCCCH
Confidence 4568899999999999999988754 321 010 000 00 0111222221111
Q ss_pred CCCHHHHHHHHHh-cCCCEEEEecc------CHHH-----HHcCCcEEEEcCC---------------Ccc--------C
Q 017781 211 SLSWKDVKWLQTI-TKLPILVKGVL------TAED-----VQAGAAGIIVSNH---------------GAR--------Q 255 (366)
Q Consensus 211 ~~~~~~i~~lr~~-~~~pv~vK~v~------~~~d-----~~aGad~I~vs~~---------------gg~--------~ 255 (366)
...++.++++|+. .++|+++-+-. ..+. .++|+|++++..- |-. .
T Consensus 82 ~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t 161 (271)
T 3nav_A 82 DICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTA 161 (271)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCC
Confidence 2245778999987 68999887532 2233 8899999877431 100 0
Q ss_pred --------------------CC--CCc-----c-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHH
Q 017781 256 --------------------LD--YVP-----A-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 256 --------------------~~--~~~-----~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~ 307 (366)
.. .|. . ..+.+.++++.. ++||++.+||++++++.+++..|||+|.+|++
T Consensus 162 ~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSA 239 (271)
T 3nav_A 162 SDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGAISGSA 239 (271)
T ss_dssp CHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred CHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 00 111 1 235567776665 79999999999999999999999999999999
Q ss_pred HHHHhh
Q 017781 308 VVYSLA 313 (366)
Q Consensus 308 ~l~~l~ 313 (366)
++..+.
T Consensus 240 iv~~i~ 245 (271)
T 3nav_A 240 VVKIIE 245 (271)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 75
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.78 E-value=8.1e-09 Score=122.44 Aligned_cols=189 Identities=19% Similarity=0.243 Sum_probs=115.4
Q ss_pred eEcCcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHH-------hccC--CCceEEEeeecCC
Q 017781 64 TVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTG--PGIRFFQLYVYKD 134 (366)
Q Consensus 64 ~l~g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i-------~~~~--~~~~~~Qly~~~d 134 (366)
+++| ..||+.+||++.. + ...|+.+..++|....++.....+.+.+ ++.. +.++.+++.. .+
T Consensus 423 ~~lg---~~PIi~a~M~~~~-s----~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~~~~~~~p~~vNl~~-~~ 493 (3089)
T 3zen_D 423 RLTG---RSPILLAGMTPTT-V----DAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELETLLEPGRAIQFNTLF-LD 493 (3089)
T ss_dssp HHHS---SCSEEECCCHHHH-T----SHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHHHSCTTCCCEEEEEC-SC
T ss_pred hhcC---CCCEEeCCCcCCc-C----CHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHHhcCCCCceeechhh-cC
Confidence 3566 6899999997532 1 4579999999999999966544445433 2223 2345555532 23
Q ss_pred HHH------HHHHHHHHHHcC--CCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhh
Q 017781 135 RNV------VAQLVRRAERAG--FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAG 206 (366)
Q Consensus 135 ~~~------~~~~l~ra~~~G--~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (366)
+.. ..+.++.+.+.| +++++++.+.|.. . +
T Consensus 494 p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~-e-e---------------------------------------- 531 (3089)
T 3zen_D 494 PYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDL-E-E---------------------------------------- 531 (3089)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCH-H-H----------------------------------------
T ss_pred hhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCch-h-H----------------------------------------
Confidence 322 146788888999 6678877665521 0 0
Q ss_pred ccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCc------EEEEcCC--CccCCCCCcchHHHH----HHHH
Q 017781 207 QIDRSLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAA------GIIVSNH--GARQLDYVPATIMAL----EEVV 270 (366)
Q Consensus 207 ~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad------~I~vs~~--gg~~~~~~~~~~~~l----~~i~ 270 (366)
..+.++.+++. ++.++.=.+.+.++ .+.|+| +|++.+. ||+. +.......+ .+++
T Consensus 532 ------~~~~i~~l~~~-Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~--g~~~~~~ll~~~~~~ir 602 (3089)
T 3zen_D 532 ------AVDIIDELNEV-GISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAGGHH--SWEDLDDLLLATYSELR 602 (3089)
T ss_dssp ------HHHHHTSTTHH-HHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSSEEC--CSCCHHHHHHHHHHHHT
T ss_pred ------hHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcCCCC--CcccHHHHHHHHHHHHh
Confidence 00112222221 23333212233332 455556 6777653 3332 122344555 4444
Q ss_pred HHcCCCceEEEecCCCCHHHHHHHH-----------HhCcCEEEecHHHHHHhhh
Q 017781 271 KATQGRIPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSLAA 314 (366)
Q Consensus 271 ~~~~~~i~vi~~GGI~~~~dv~kal-----------alGAd~V~igr~~l~~l~~ 314 (366)
+.. ++|||+.|||.+++++..+| ++|||+|++|+.|+....+
T Consensus 603 ~~~--~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~Ea 655 (3089)
T 3zen_D 603 SRS--NITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLEA 655 (3089)
T ss_dssp TCT--TEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTTS
T ss_pred hcC--CCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCccc
Confidence 333 79999999999999999999 9999999999999876544
No 76
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=98.76 E-value=5.7e-08 Score=95.27 Aligned_cols=93 Identities=6% Similarity=-0.125 Sum_probs=71.8
Q ss_pred CCCHHHHHHHHHhcC-CCEEEEeccC-----------HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHH
Q 017781 211 SLSWKDVKWLQTITK-LPILVKGVLT-----------AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVV 270 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~-~pv~vK~v~~-----------~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~ 270 (366)
.+..+.++.+|+.++ .||.+|.... .++ .++|+|+|.+++.+... ...+. + +.+++
T Consensus 228 r~~~eiv~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~--~~~~~-~-~~~ir 303 (379)
T 3aty_A 228 QLIYDVTKSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN--QQIGD-V-VAWVR 303 (379)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS--CCCCC-H-HHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC--CCccH-H-HHHHH
Confidence 356788999999985 4899997642 222 78999999998743111 11122 5 67777
Q ss_pred HHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHH
Q 017781 271 KATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 310 (366)
Q Consensus 271 ~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~ 310 (366)
+.+ ++|||+.||| +++++.++|+.| ||+|++||+++.
T Consensus 304 ~~~--~iPvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 304 GSY--SGVKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp TTC--CSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred HHC--CCcEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 777 7999999999 999999999998 999999999986
No 77
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.73 E-value=1.1e-08 Score=97.02 Aligned_cols=84 Identities=25% Similarity=0.397 Sum_probs=65.5
Q ss_pred CCCEEEEeccCHHH----HHcCCcEEEEcCCCccCC-----------------------CC-------CcchHHHHHHHH
Q 017781 225 KLPILVKGVLTAED----VQAGAAGIIVSNHGARQL-----------------------DY-------VPATIMALEEVV 270 (366)
Q Consensus 225 ~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~-----------------------~~-------~~~~~~~l~~i~ 270 (366)
+.++++ .+.+.++ .++|+|.|.+.|++|+.. +. ..++++.+++++
T Consensus 125 g~~vvv-~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~ 203 (297)
T 4adt_A 125 KTPFVC-GCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTR 203 (297)
T ss_dssp SSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHH
T ss_pred CCeEEE-EeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHH
Confidence 567766 5777766 688999999988755321 01 134577888888
Q ss_pred HHcCCCceEE--EecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 271 KATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 271 ~~~~~~i~vi--~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
+.+ ++||+ +.|||++++|+.+++.+|||+|++|+.++.+
T Consensus 204 ~~~--~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a 244 (297)
T 4adt_A 204 KLK--RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFES 244 (297)
T ss_dssp HHT--SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTS
T ss_pred Hhc--CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcC
Confidence 876 57765 9999999999999999999999999998753
No 78
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.70 E-value=4.2e-07 Score=84.92 Aligned_cols=49 Identities=20% Similarity=0.285 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhh
Q 017781 263 IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 263 ~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~ 313 (366)
.+.+.++++.. ++||+++|||++++++.+++..|||+|.+|+.+.....
T Consensus 194 ~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~~~~ 242 (268)
T 1qop_A 194 HHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKIIE 242 (268)
T ss_dssp HHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred HHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhhHh
Confidence 56777777765 79999999999999999999999999999999987653
No 79
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.68 E-value=2.5e-08 Score=94.40 Aligned_cols=81 Identities=19% Similarity=0.240 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHcCCCceEE--EecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcC
Q 017781 262 TIMALEEVVKATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSG 339 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi--~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G 339 (366)
.++.+.++++.. ++|++ ++|||++++|+.+++.+|||+|++|+.++.+ .. ....++.+++.++.++...+
T Consensus 195 ~~~~i~~l~~~~--~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~---~d---p~~~~~~l~~~i~~~~~~~~ 266 (297)
T 2zbt_A 195 PFELVKWVHDHG--RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS---GD---PRKRARAIVRAVAHYNDPEV 266 (297)
T ss_dssp CHHHHHHHHHHS--SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGS---SC---HHHHHHHHHHHHHTTTCHHH
T ss_pred hHHHHHHHHHhc--CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCC---CC---HHHHHHHHHHHHHHHhchHh
Confidence 456777777765 68888 9999999999999999999999999998642 11 23456677777776666666
Q ss_pred CCChhhhcccc
Q 017781 340 CRSLKEITRDH 350 (366)
Q Consensus 340 ~~~l~el~~~~ 350 (366)
+.++.++.+..
T Consensus 267 ~~~~~~~~g~~ 277 (297)
T 2zbt_A 267 LAEVSEDLGEP 277 (297)
T ss_dssp HHHHHTTCCCC
T ss_pred hhHHHHhcCce
Confidence 66777777655
No 80
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.66 E-value=2.7e-07 Score=84.76 Aligned_cols=67 Identities=24% Similarity=0.337 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 017781 262 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 331 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el 331 (366)
.++.+.++++.+ ++||+++|||++++++.+++.+|||+|.+|+.++.....+. +.+.++++.+++.|
T Consensus 179 ~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsai~~~~~~~~-~~~~~~~~~~~~~~ 245 (248)
T 1geq_A 179 AYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIGEKG-REATEFLKKKVEEL 245 (248)
T ss_dssp HHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHG-GGCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHHHcCCCEEEEcHHHHhhHhhCh-HHHHHHHHHHHHHh
Confidence 356777777776 79999999999999999999999999999999876532111 34455555554444
No 81
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.65 E-value=2.1e-07 Score=86.25 Aligned_cols=48 Identities=29% Similarity=0.621 Sum_probs=41.4
Q ss_pred chHHHHHHHHHHcCCCceE--EEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 261 ATIMALEEVVKATQGRIPV--FLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 261 ~~~~~l~~i~~~~~~~i~v--i~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
++++.|.++++.. ++|| |+.|||.|++|+.+++.+|||+|++||.++.
T Consensus 185 ad~elI~~Ike~~--~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 185 VPVSLLKDVLEKG--KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFK 234 (291)
T ss_dssp SCHHHHHHHHHHT--SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGG
T ss_pred CCHHHHHHHHHcc--CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhC
Confidence 3577888888776 7888 5689999999999999999999999998764
No 82
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.63 E-value=6.7e-07 Score=79.70 Aligned_cols=158 Identities=11% Similarity=0.088 Sum_probs=100.3
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhh----c
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAG----Q 207 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 207 (366)
..+.+...++++.+.+.|++.+.+++.+|..-.-.+.++..++-...+...... +. ......... .
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~-----~~-----~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVT-----SV-----EQCRKAVESGAEFI 87 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHHTTCEEEEESCC-----SH-----HHHHHHHHHTCSEE
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCCCCcEEEecccC-----CH-----HHHHHHHHcCCCEE
Confidence 567888888999999999999999988864211133333332100000000000 00 001111111 1
Q ss_pred cCCCCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEec
Q 017781 208 IDRSLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 283 (366)
Q Consensus 208 ~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~G 283 (366)
..+.+.-+.++..++ .++|++. ++.+..+ .++|+|.|.+... ....++.+.++++.++ ++||+++|
T Consensus 88 v~~~~~~~~~~~~~~-~g~~vi~-g~~t~~e~~~a~~~Gad~vk~~~~-------~~~g~~~~~~l~~~~~-~~pvia~G 157 (205)
T 1wa3_A 88 VSPHLDEEISQFCKE-KGVFYMP-GVMTPTELVKAMKLGHTILKLFPG-------EVVGPQFVKAMKGPFP-NVKFVPTG 157 (205)
T ss_dssp ECSSCCHHHHHHHHH-HTCEEEC-EECSHHHHHHHHHTTCCEEEETTH-------HHHHHHHHHHHHTTCT-TCEEEEBS
T ss_pred EcCCCCHHHHHHHHH-cCCcEEC-CcCCHHHHHHHHHcCCCEEEEcCc-------cccCHHHHHHHHHhCC-CCcEEEcC
Confidence 224445555766665 6899887 6667766 9999999987431 1123456666666554 79999999
Q ss_pred CCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 284 GVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 284 GI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
||. .+++.+++.+|||+|.+|+.++.
T Consensus 158 GI~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 158 GVN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp SCC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred CCC-HHHHHHHHHCCCCEEEECccccC
Confidence 996 78999999999999999998864
No 83
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.63 E-value=4e-08 Score=93.56 Aligned_cols=79 Identities=23% Similarity=0.318 Sum_probs=54.6
Q ss_pred chHHHHHHHHHHcCCCceEE--EecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHc
Q 017781 261 ATIMALEEVVKATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALS 338 (366)
Q Consensus 261 ~~~~~l~~i~~~~~~~i~vi--~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~ 338 (366)
..++.+.++++.. ++||+ ++|||++++|+.+++.+|||+|++|+.++.. ..+ ...++.+.+.+..++...
T Consensus 194 ~~~~~i~~i~~~~--~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~---~~p---~~~~~~l~~~~~~~~~~~ 265 (305)
T 2nv1_A 194 APYELLLQIKKDG--KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS---DNP---AKFAKAIVEATTHFTDYK 265 (305)
T ss_dssp CCHHHHHHHHHHT--SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGS---SCH---HHHHHHHHHHHHTTTCHH
T ss_pred ccHHHHHHHHHhc--CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcC---CCH---HHHHHHHHHHHHHhcChh
Confidence 3456777777765 78988 9999999999999999999999999998753 112 234445555555444444
Q ss_pred CCCChhhhc
Q 017781 339 GCRSLKEIT 347 (366)
Q Consensus 339 G~~~l~el~ 347 (366)
+..++.++.
T Consensus 266 ~~~~~~~~~ 274 (305)
T 2nv1_A 266 LIAELSKEL 274 (305)
T ss_dssp HHHHHTSCC
T ss_pred hHHHHHHHh
Confidence 433344443
No 84
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.62 E-value=1.1e-06 Score=82.47 Aligned_cols=168 Identities=16% Similarity=0.151 Sum_probs=102.0
Q ss_pred HHHHHHHHcCCceecCCCCCCCHHHHhccCC--CceEEE-e-eec--CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcch
Q 017781 92 ATARAASAAGTIMTLSSWSTSSVEEVASTGP--GIRFFQ-L-YVY--KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRR 165 (366)
Q Consensus 92 ~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~--~~~~~Q-l-y~~--~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r 165 (366)
.+.+.|.+.|+..++- ...-+....+... +....- + |+. ...+.-...++.|.+.|++.|.+.+|...
T Consensus 78 ~lc~eA~~~g~aaVCV--~P~~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~---- 151 (288)
T 3oa3_A 78 VLCAEAKEYGFATVCV--RPDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPW---- 151 (288)
T ss_dssp HHHHHHHHHTCSEEEE--CGGGHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHH----
T ss_pred HHHHHHHhcCCcEEEE--CHHHHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhh----
Confidence 6788888888876541 1222333222211 111111 1 221 23444455567777899999988766210
Q ss_pred hHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEec-----cCHHH--
Q 017781 166 EADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGV-----LTAED-- 238 (366)
Q Consensus 166 ~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v-----~~~~d-- 238 (366)
+. .++.....++|+.+++..+.| ++|.+ ++.++
T Consensus 152 -------------------------------------lk--~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~ 191 (288)
T 3oa3_A 152 -------------------------------------LS--EKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEII 191 (288)
T ss_dssp -------------------------------------HH--TTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHH
T ss_pred -------------------------------------hc--CCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHH
Confidence 00 012223456788898887766 58866 35444
Q ss_pred ------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecH
Q 017781 239 ------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 306 (366)
Q Consensus 239 ------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr 306 (366)
.++|||+|..|...+ ...-.+.....+.++.+..+.+++|.++||||+.+|+.+++.+||+.++..+
T Consensus 192 ~A~~ia~eaGADfVKTSTGf~-~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 192 AGCVLSSLAGADYVKTSTGFN-GPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp HHHHHHHHTTCSEEECCCSSS-SCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred HHHHHHHHcCCCEEEcCCCCC-CCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhh
Confidence 899999999884211 1111233445555555444568999999999999999999999999665554
No 85
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.60 E-value=6.4e-07 Score=81.96 Aligned_cols=90 Identities=29% Similarity=0.201 Sum_probs=67.6
Q ss_pred CHHHHHHHHHhcCCCEEEEec-----cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 213 SWKDVKWLQTITKLPILVKGV-----LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v-----~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
..++|+.+++..+. .++|.+ ++.++ .++|+|+|..|...+ .+..+++.+...++.++++++|
T Consensus 129 v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~----~ggAt~~dv~lmr~~vg~~v~V 203 (239)
T 3ngj_A 129 VEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFG----THGATPEDVKLMKDTVGDKALV 203 (239)
T ss_dssp HHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHGGGSEE
T ss_pred HHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCC----CCCCCHHHHHHHHHhhCCCceE
Confidence 44678888888753 367755 45554 789999999885311 1235666666667777778999
Q ss_pred EEecCCCCHHHHHHHHHhCcCEEEecHH
Q 017781 280 FLDGGVRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalGAd~V~igr~ 307 (366)
.++||||+.+|+.+++.+||+.++..+.
T Consensus 204 KasGGIrt~~da~~~i~aGA~riGtS~~ 231 (239)
T 3ngj_A 204 KAAGGIRTFDDAMKMINNGASRIGASAG 231 (239)
T ss_dssp EEESSCCSHHHHHHHHHTTEEEEEESCH
T ss_pred EEeCCCCCHHHHHHHHHhcccceecccH
Confidence 9999999999999999999998776643
No 86
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.59 E-value=3.2e-07 Score=85.94 Aligned_cols=84 Identities=21% Similarity=0.300 Sum_probs=64.6
Q ss_pred cCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCc
Q 017781 224 TKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 299 (366)
Q Consensus 224 ~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGA 299 (366)
+++.+++ .+.+.++ .++|+|.|.+.|..... -...++.+.++++.++.++|+++.|||++++|+.+++.+||
T Consensus 161 lGl~~lv-ev~t~ee~~~A~~~Gad~IGv~~r~l~~---~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~Ga 236 (272)
T 3qja_A 161 LGMTALV-EVHTEQEADRALKAGAKVIGVNARDLMT---LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGA 236 (272)
T ss_dssp TTCEEEE-EESSHHHHHHHHHHTCSEEEEESBCTTT---CCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTC
T ss_pred CCCcEEE-EcCCHHHHHHHHHCCCCEEEECCCcccc---cccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCC
Confidence 5666554 4567766 78899999987643222 22345566677776765799999999999999999999999
Q ss_pred CEEEecHHHHHH
Q 017781 300 SGIFIGRPVVYS 311 (366)
Q Consensus 300 d~V~igr~~l~~ 311 (366)
|+|.||++++.+
T Consensus 237 dgvlVGsal~~a 248 (272)
T 3qja_A 237 DAVLVGEGLVTS 248 (272)
T ss_dssp SEEEECHHHHTC
T ss_pred CEEEEcHHHhCC
Confidence 999999999764
No 87
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=98.56 E-value=1.3e-06 Score=85.02 Aligned_cols=97 Identities=14% Similarity=-0.021 Sum_probs=65.3
Q ss_pred CCHHHHHHHHHhcC-CCEEEEeccC-----------HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHH
Q 017781 212 LSWKDVKWLQTITK-LPILVKGVLT-----------AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVK 271 (366)
Q Consensus 212 ~~~~~i~~lr~~~~-~pv~vK~v~~-----------~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~ 271 (366)
+..+.++.+|+.++ -+|.+|...+ .+. .+.|+|.+.++...-..............++++
T Consensus 204 f~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~ 283 (358)
T 4a3u_A 204 LLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRK 283 (358)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHH
Confidence 46688999999883 4688886421 111 678999998876331111110011123345566
Q ss_pred HcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHHH
Q 017781 272 ATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVYS 311 (366)
Q Consensus 272 ~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~~ 311 (366)
.. ..||+ .||+.+++++.++|+-| ||+|++||++|..
T Consensus 284 ~~--~~~v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~lad 321 (358)
T 4a3u_A 284 VF--KPPLV-LNQDYTFETAQAALDSGVADAISFGRPFIGN 321 (358)
T ss_dssp HC--CSCEE-EESSCCHHHHHHHHHHTSCSEEEESHHHHHC
T ss_pred hc--CCcEE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHhC
Confidence 55 45665 57889999999999999 9999999999863
No 88
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.54 E-value=1.3e-06 Score=81.69 Aligned_cols=158 Identities=17% Similarity=0.214 Sum_probs=95.1
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCcchhHHH---hhhcCCCCccccccccccccCCCccccchhhHHHhhhccCC-----
Q 017781 139 AQLVRRAERAGFKAIALTVDTPRLGRREADI---KNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR----- 210 (366)
Q Consensus 139 ~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----- 210 (366)
.++.+..++.|+.+|=|-.|....+....++ +....+|. ..+.+ - +. ..+ ..+.....-|.
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~lPV--l~Kdf---i---~d--~~q-i~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPA--LRKDF---L---FD--PYQ-VYEARSWGADCILIIM 150 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTSSSCE--EEESC---C---CS--THH-HHHHHHTTCSEEEEET
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhcCCCE--EECCc---c---CC--HHH-HHHHHHcCCCEEEEcc
Confidence 4566778889999986655655554444443 33344442 11111 0 00 000 11111111222
Q ss_pred -CCCHHHHHHHHHh---cCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe
Q 017781 211 -SLSWKDVKWLQTI---TKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 282 (366)
Q Consensus 211 -~~~~~~i~~lr~~---~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~ 282 (366)
.++.+.++++.+. .+.-+++ .+.+.++ .++|+|.|-+.|...+.. ...++...++.+.++.++|+|+.
T Consensus 151 a~L~~~~l~~l~~~a~~lGl~~lv-evh~~eEl~~A~~~ga~iIGinnr~l~t~---~~dl~~~~~L~~~ip~~~~vIae 226 (272)
T 3tsm_A 151 ASVDDDLAKELEDTAFALGMDALI-EVHDEAEMERALKLSSRLLGVNNRNLRSF---EVNLAVSERLAKMAPSDRLLVGE 226 (272)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEEE-EECSHHHHHHHTTSCCSEEEEECBCTTTC---CBCTHHHHHHHHHSCTTSEEEEE
T ss_pred cccCHHHHHHHHHHHHHcCCeEEE-EeCCHHHHHHHHhcCCCEEEECCCCCccC---CCChHHHHHHHHhCCCCCcEEEE
Confidence 2333445554332 3544333 3456666 788999887776543322 23456666777777778999999
Q ss_pred cCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 283 GGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 283 GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
|||.+++|+.++..+|||+|.||+.++.+
T Consensus 227 sGI~t~edv~~l~~~Ga~gvLVG~almr~ 255 (272)
T 3tsm_A 227 SGIFTHEDCLRLEKSGIGTFLIGESLMRQ 255 (272)
T ss_dssp SSCCSHHHHHHHHTTTCCEEEECHHHHTS
T ss_pred CCCCCHHHHHHHHHcCCCEEEEcHHHcCC
Confidence 99999999999999999999999999864
No 89
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.48 E-value=9e-07 Score=82.44 Aligned_cols=179 Identities=18% Similarity=0.151 Sum_probs=107.0
Q ss_pred ccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhccC--CCceEEEeeecCC----H--HHHHH
Q 017781 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTG--PGIRFFQLYVYKD----R--NVVAQ 140 (366)
Q Consensus 69 ~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~--~~~~~~Qly~~~d----~--~~~~~ 140 (366)
.+.+|+.++||.... .=..+++++.+.|+..++.+.. ..+.+.+.. ..+..+|+....+ . +...+
T Consensus 31 ~id~~~~l~p~~~~~-----~~~~~~~~~~~~g~~~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~~ 103 (273)
T 2qjg_A 31 PMDHGVSNGPIKGLI-----DIRKTVNDVAEGGANAVLLHKG--IVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIVT 103 (273)
T ss_dssp ECCHHHHHCSCTTSS-----SHHHHHHHHHHHTCSEEEECHH--HHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEECS
T ss_pred EcccccccCCCcchh-----hHHHHHHHHHhcCCCEEEeCHH--HHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHHH
Confidence 445677778874321 1237899999999988763210 011111111 1345667653221 1 11134
Q ss_pred HHHHHHHcCCCEEEEe--cCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHH
Q 017781 141 LVRRAERAGFKAIALT--VDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVK 218 (366)
Q Consensus 141 ~l~ra~~~G~~ai~vt--vd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 218 (366)
.++++.++|++.+.+. ..++.. .+.. ...+.+.
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~~~--------------------------------------~~~~-------~~~~~v~ 138 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSDED--------------------------------------WEAY-------RDLGMIA 138 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETSTTH--------------------------------------HHHH-------HHHHHHH
T ss_pred HHHHHHHcCCCEEEEEEecCCCCH--------------------------------------HHHH-------HHHHHHH
Confidence 5677888999998443 332100 0000 0112222
Q ss_pred HHHHhcCCCEEEEec---------cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 219 WLQTITKLPILVKGV---------LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 219 ~lr~~~~~pv~vK~v---------~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.+.+++|+++... .+.++ .++|+|+|.++.. ..++.+.++++.+ ++||++
T Consensus 139 ~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~~---------~~~~~l~~i~~~~--~ipvva 207 (273)
T 2qjg_A 139 ETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSYT---------GDIDSFRDVVKGC--PAPVVV 207 (273)
T ss_dssp HHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECCC---------SSHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECCC---------CCHHHHHHHHHhC--CCCEEE
Confidence 333335788888741 23322 7899999988741 3567888888877 799999
Q ss_pred ecCCCC--HHH----HHHHHHhCcCEEEecHHHHH
Q 017781 282 DGGVRR--GTD----VFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 282 ~GGI~~--~~d----v~kalalGAd~V~igr~~l~ 310 (366)
.|||++ .+| +.+++.+||++|.+|+.++.
T Consensus 208 ~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~ 242 (273)
T 2qjg_A 208 AGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQ 242 (273)
T ss_dssp ECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHT
T ss_pred EeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhC
Confidence 999995 778 55666899999999999865
No 90
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.48 E-value=1.8e-06 Score=77.33 Aligned_cols=185 Identities=13% Similarity=0.156 Sum_probs=106.7
Q ss_pred ecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhc---
Q 017781 131 VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQ--- 207 (366)
Q Consensus 131 ~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 207 (366)
...|.+...+.++++.+.|++.+-++...+..-...+.+...+..+.-+... ... ... ....+....
T Consensus 14 ~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g---~~~----~~~---~i~~a~~~Gad~ 83 (212)
T 2v82_A 14 RGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAG---TVL----KPE---QVDALARMGCQL 83 (212)
T ss_dssp TTCCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEE---CCC----SHH---HHHHHHHTTCCE
T ss_pred eCCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEec---ccc----CHH---HHHHHHHcCCCE
Confidence 3567777777788888888888877766543322233344433322111000 000 000 000000000
Q ss_pred -cCCCCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe
Q 017781 208 -IDRSLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 282 (366)
Q Consensus 208 -~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~ 282 (366)
.-+....+.++..++ .+.++++. +.++++ .+.|+|+|.+... .+..++.+.++++.++.++||+++
T Consensus 84 V~~~~~~~~~~~~~~~-~g~~~~~g-~~t~~e~~~a~~~G~d~v~v~~t-------~~~g~~~~~~l~~~~~~~ipvia~ 154 (212)
T 2v82_A 84 IVTPNIHSEVIRRAVG-YGMTVCPG-CATATEAFTALEAGAQALKIFPS-------SAFGPQYIKALKAVLPSDIAVFAV 154 (212)
T ss_dssp EECSSCCHHHHHHHHH-TTCEEECE-ECSHHHHHHHHHTTCSEEEETTH-------HHHCHHHHHHHHTTSCTTCEEEEE
T ss_pred EEeCCCCHHHHHHHHH-cCCCEEee-cCCHHHHHHHHHCCCCEEEEecC-------CCCCHHHHHHHHHhccCCCeEEEe
Confidence 012233455555444 57666554 677776 7899999987331 122456777777665335999999
Q ss_pred cCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHH
Q 017781 283 GGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMAL 337 (366)
Q Consensus 283 GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~ 337 (366)
|||. .+++.+++.+||++|.+|+.++.+. +..+.+.+.++.+.+.++...++
T Consensus 155 GGI~-~~~i~~~~~~Ga~gv~vGsai~~~~--~~~~d~~~~~~~l~~~~~~~~~~ 206 (212)
T 2v82_A 155 GGVT-PENLAQWIDAGCAGAGLGSDLYRAG--QSVERTAQQAAAFVKAYREAVQL 206 (212)
T ss_dssp SSCC-TTTHHHHHHHTCSEEEECTTTCCTT--CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCC-HHHHHHHHHcCCCEEEEChHHhCCC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 9997 9999999999999999999886421 01133555666666666655544
No 91
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.45 E-value=2.6e-06 Score=78.82 Aligned_cols=70 Identities=16% Similarity=0.227 Sum_probs=54.8
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.+.|++.|.+++........+ +.++.+.++++.+ ++|||+.|||++++|+.+++.+|||+|++|++++..
T Consensus 166 ~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~~ 235 (266)
T 2w6r_A 166 EKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFR 235 (266)
T ss_dssp HHTTCSEEEEEETTTTTTCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC--
T ss_pred HHcCCCEEEEEeecCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHcC
Confidence 788999999864321111123 3578888888776 899999999999999999999999999999998754
No 92
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.45 E-value=3.8e-06 Score=77.65 Aligned_cols=89 Identities=24% Similarity=0.189 Sum_probs=67.1
Q ss_pred CHHHHHHHHHhcCCCEEEEec-----cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 213 SWKDVKWLQTITKLPILVKGV-----LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v-----~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
..++|+.+++..+ ...+|.+ ++.++ .++|||+|..|...+ .+.++.+.+...++.++++++|
T Consensus 145 v~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~----~~GAT~edV~lm~~~vg~~v~V 219 (260)
T 3r12_A 145 VYEDIRSVVESVK-GKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFG----TGGATAEDVHLMKWIVGDEMGV 219 (260)
T ss_dssp HHHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSS----SCCCCHHHHHHHHHHHCTTSEE
T ss_pred HHHHHHHHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCCCC----CCCCCHHHHHHHHHHhCCCceE
Confidence 3467888888775 3456866 35544 899999999885211 2335667776677777779999
Q ss_pred EEecCCCCHHHHHHHHHhCcCEEEecH
Q 017781 280 FLDGGVRRGTDVFKALALGASGIFIGR 306 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalGAd~V~igr 306 (366)
-++||||+.+|+.+.+.+||+-++..+
T Consensus 220 KaAGGIrt~~~al~mi~aGA~RiGtS~ 246 (260)
T 3r12_A 220 KASGGIRTFEDAVKMIMYGADRIGTSS 246 (260)
T ss_dssp EEESSCCSHHHHHHHHHTTCSEEEESC
T ss_pred EEeCCCCCHHHHHHHHHcCCceeecch
Confidence 999999999999999999999766553
No 93
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.45 E-value=3.7e-06 Score=78.25 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=45.7
Q ss_pred HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHH
Q 017781 264 MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEML 327 (366)
Q Consensus 264 ~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l 327 (366)
+.+.++++.. ++||++.+||++++++.+ +..|||+|.+|+.+...+..+..+.+.++++.+
T Consensus 196 ~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~~~~~~~~~~~~~~~~~ 256 (262)
T 2ekc_A 196 KKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKLAGQKKIEDLGNLVKEL 256 (262)
T ss_dssp HHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhhhhhhhHHHHHHHHHHH
Confidence 5666776665 799999999999999999 889999999999998764322233344433333
No 94
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.43 E-value=4.3e-06 Score=76.16 Aligned_cols=90 Identities=20% Similarity=0.187 Sum_probs=67.5
Q ss_pred CHHHHHHHHHhcCCCEEEEec-----c----CHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCC
Q 017781 213 SWKDVKWLQTITKLPILVKGV-----L----TAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG 275 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v-----~----~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~ 275 (366)
..++|+.+++..+ ...+|.+ + +.++ .++|+|+|..|...+ ..+..+.+.+...++.+++
T Consensus 114 v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~---~~~gAt~edv~lm~~~v~~ 189 (231)
T 3ndo_A 114 VSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTSTGFH---PSGGASVQAVEIMARTVGE 189 (231)
T ss_dssp HHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCC---TTCSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCC---CCCCCCHHHHHHHHHHhCC
Confidence 4467888888875 3456865 4 5544 899999999875211 0133567777777777777
Q ss_pred CceEEEecCCCCHHHHHHHHHhCcCEEEecH
Q 017781 276 RIPVFLDGGVRRGTDVFKALALGASGIFIGR 306 (366)
Q Consensus 276 ~i~vi~~GGI~~~~dv~kalalGAd~V~igr 306 (366)
+++|-++||||+.+|+.+.+.+||+-++..+
T Consensus 190 ~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 190 RLGVKASGGIRTAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp TSEEEEESSCCSHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEeCCCCCHHHHHHHHHhcchhcccch
Confidence 9999999999999999999999999665543
No 95
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.42 E-value=4.4e-07 Score=83.41 Aligned_cols=69 Identities=19% Similarity=0.235 Sum_probs=0.0
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|++.|.+++........+ +.++.+.++++.+ ++|||+.|||++.+|+.+++.+|||+|++||+++.
T Consensus 166 ~~~G~~~i~~t~~~~~g~~~g-~~~~~~~~i~~~~--~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~ 234 (247)
T 3tdn_A 166 EKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 234 (247)
T ss_dssp ------------------------------------------------------------------------
T ss_pred HhcCCCEEEEecccCCCCcCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHc
Confidence 678999988765321111112 3567778887776 89999999999999999999999999999999875
No 96
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.39 E-value=6.5e-06 Score=74.63 Aligned_cols=164 Identities=21% Similarity=0.179 Sum_probs=100.2
Q ss_pred HHHHHHHHHcCCceecCCCCCCCHHHHhccCC--Cce--EEEeeec--CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcc
Q 017781 91 YATARAASAAGTIMTLSSWSTSSVEEVASTGP--GIR--FFQLYVY--KDRNVVAQLVRRAERAGFKAIALTVDTPRLGR 164 (366)
Q Consensus 91 ~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~--~~~--~~Qly~~--~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~ 164 (366)
..+.+.|.+.|+..++-. ..-++...+... ... ..--|+. ...+.....++.|.+.|++.+.+.+|...
T Consensus 22 ~~l~~~a~~~~~~aVcv~--p~~v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~--- 96 (220)
T 1ub3_A 22 AKAAEEALEYGFYGLCIP--PSYVAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACARGADEVDMVLHLGR--- 96 (220)
T ss_dssp HHHHHHHHHHTCSEEECC--GGGHHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHH---
T ss_pred HHHHHHHHHhCCCEEEEC--HHHHHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEEecccchh---
Confidence 367788888887665421 111222222111 111 1111222 33444455667778899999988776210
Q ss_pred hhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEec-----cCHHH-
Q 017781 165 READIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGV-----LTAED- 238 (366)
Q Consensus 165 r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v-----~~~~d- 238 (366)
... ++.+...+++..+++..+.+ .+|.+ ++.++
T Consensus 97 --------------------------------------~~~--g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i 135 (220)
T 1ub3_A 97 --------------------------------------AKA--GDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEI 135 (220)
T ss_dssp --------------------------------------HHT--TCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHH
T ss_pred --------------------------------------hhC--CCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHH
Confidence 000 11222456788888877544 77754 35554
Q ss_pred -------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEe
Q 017781 239 -------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 304 (366)
Q Consensus 239 -------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~i 304 (366)
.++|||+|..|...+ .+..+.+.+..+++.++.++||-++||||+.+|+++.+.+||+-++.
T Consensus 136 ~~a~~ia~eaGADfVKTsTGf~----~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aGa~RiG~ 204 (220)
T 1ub3_A 136 ARLAEAAIRGGADFLKTSTGFG----PRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAGASRLGT 204 (220)
T ss_dssp HHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCCCcccch
Confidence 899999999875211 12245566666666666689999999999999999999999994443
No 97
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.33 E-value=5.4e-05 Score=70.39 Aligned_cols=209 Identities=15% Similarity=0.194 Sum_probs=120.3
Q ss_pred CCceEecccccccccCChhhHHHHHHHHHcCCceecC------------CCCCC---------CH---HHHhccCC-Cce
Q 017781 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS------------SWSTS---------SV---EEVASTGP-GIR 125 (366)
Q Consensus 71 ~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs------------~~~~~---------~~---e~i~~~~~-~~~ 125 (366)
..||+-+..| .+ -.|+.+++-|+.+.+- +.+.. .+ +|+....+ .|.
T Consensus 27 ~~~iig~gaG-tG--------lsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV 97 (286)
T 2p10_A 27 GEPIIGGGAG-TG--------LSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPV 97 (286)
T ss_dssp TCCEEEEEES-SH--------HHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCE
T ss_pred CCceEEEecc-cc--------hhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCE
Confidence 4677665543 33 4899999999998862 11110 01 13333333 589
Q ss_pred EEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhh
Q 017781 126 FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVA 205 (366)
Q Consensus 126 ~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (366)
|+|+........+...++.++++|+.++ + |.|..|.-.-..|+. +.
T Consensus 98 ~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~--N~ptvglidG~fr~~-------------------------------LE 143 (286)
T 2p10_A 98 LAGVNGTDPFMVMSTFLRELKEIGFAGV-Q--NFPTVGLIDGLFRQN-------------------------------LE 143 (286)
T ss_dssp EEEECTTCTTCCHHHHHHHHHHHTCCEE-E--ECSCGGGCCHHHHHH-------------------------------HH
T ss_pred EEEECCcCCCcCHHHHHHHHHHhCCceE-E--ECCCcccccchhhhh-------------------------------Hh
Confidence 9997643333457778899999999998 4 556443221111111 11
Q ss_pred hccCCCCCHHH-HHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCC---CccC-CCCCcc--h-HHHHHHHH--
Q 017781 206 GQIDRSLSWKD-VKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNH---GARQ-LDYVPA--T-IMALEEVV-- 270 (366)
Q Consensus 206 ~~~d~~~~~~~-i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~---gg~~-~~~~~~--~-~~~l~~i~-- 270 (366)
...+.++. ++-++..- ..-+.+--+.++++ .++|+|.|++.-. ||.- .....+ . .+.+.++.
T Consensus 144 ---E~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a 220 (286)
T 2p10_A 144 ---ETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEA 220 (286)
T ss_dssp ---HTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHH
T ss_pred ---hcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHH
Confidence 11234433 33333322 12244445678887 9999999998643 2210 011111 1 23344443
Q ss_pred -HHcCCCceEEEec-CCCCHHHHHHHHHh--CcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHH
Q 017781 271 -KATQGRIPVFLDG-GVRRGTDVFKALAL--GASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 332 (366)
Q Consensus 271 -~~~~~~i~vi~~G-GI~~~~dv~kalal--GAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~ 332 (366)
+.+..++-|+.-| ||.+++|+.+++.+ |++++..++.+... + ++..+..+.++++
T Consensus 221 ~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~------p-~e~ai~~~~~~fk 279 (286)
T 2p10_A 221 ARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERL------P-AEEAIRSQTLAFK 279 (286)
T ss_dssp HHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHH------H-HHHHHHHHHHHHH
T ss_pred HHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcC------C-HHHHHHHHHHHHH
Confidence 3344567666666 99999999999999 99999999988764 2 4555555555554
No 98
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.33 E-value=1.5e-05 Score=72.60 Aligned_cols=71 Identities=24% Similarity=0.277 Sum_probs=52.1
Q ss_pred cchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHc
Q 017781 260 PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALS 338 (366)
Q Consensus 260 ~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~ 338 (366)
+..++-+.++++.. .+++|.++|||+ .+.+.++..+|||.+.+||++..+ + -....++.++++++......
T Consensus 154 ~~~l~ki~~lr~~~-~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a-----~-dp~~~~~~l~~~~~~~~~~~ 224 (228)
T 3ovp_A 154 EDMMPKVHWLRTQF-PSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRS-----E-DPRSVINLLRNVCSEAAQKR 224 (228)
T ss_dssp GGGHHHHHHHHHHC-TTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTC-----S-CHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc-CCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCC-----C-CHHHHHHHHHHHHHHHHhhc
Confidence 44666777777654 368999999995 889999999999999999987532 1 12345667777777666543
No 99
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.33 E-value=3.5e-06 Score=80.08 Aligned_cols=46 Identities=39% Similarity=0.629 Sum_probs=39.7
Q ss_pred HHHHHHHHHcCCCceE--EEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 264 MALEEVVKATQGRIPV--FLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 264 ~~l~~i~~~~~~~i~v--i~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
+.|+++.+.. ++|| ++.|||.+++|+.+++.+|||+|+||+.++.+
T Consensus 230 ell~~i~~~~--~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~a 277 (330)
T 2yzr_A 230 EVLLEVKKLG--RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFKS 277 (330)
T ss_dssp HHHHHHHHHT--SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHTS
T ss_pred HHHHHHHHhC--CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhcC
Confidence 6666776655 7888 69999999999999999999999999998753
No 100
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.32 E-value=5.1e-06 Score=74.18 Aligned_cols=89 Identities=17% Similarity=0.210 Sum_probs=61.6
Q ss_pred HHHHHHhcCCCEEEEe--ccCHHH-----HHcCCcEEEEcCC-CccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 217 VKWLQTITKLPILVKG--VLTAED-----VQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 217 i~~lr~~~~~pv~vK~--v~~~~d-----~~aGad~I~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
++.+++. ++++++-. ..++.+ .+.|+|+|.+... +|.. .++..++.+.++++.++ ++||+++|||+ +
T Consensus 96 ~~~~~~~-g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~--~~~~~~~~i~~l~~~~~-~~~i~~~gGI~-~ 170 (211)
T 3f4w_A 96 IRAAKEA-GKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQA--AGRKPIDDLITMLKVRR-KARIAVAGGIS-S 170 (211)
T ss_dssp HHHHHHH-TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHH--TTCCSHHHHHHHHHHCS-SCEEEEESSCC-T
T ss_pred HHHHHHc-CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccc--cCCCCHHHHHHHHHHcC-CCcEEEECCCC-H
Confidence 4444443 55655431 234322 7899999887532 1211 12235677888887753 69999999996 9
Q ss_pred HHHHHHHHhCcCEEEecHHHHH
Q 017781 289 TDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 289 ~dv~kalalGAd~V~igr~~l~ 310 (366)
+++.+++.+|||+|.+||+++.
T Consensus 171 ~~~~~~~~~Gad~vvvGsai~~ 192 (211)
T 3f4w_A 171 QTVKDYALLGPDVVIVGSAITH 192 (211)
T ss_dssp TTHHHHHTTCCSEEEECHHHHT
T ss_pred HHHHHHHHcCCCEEEECHHHcC
Confidence 9999999999999999998864
No 101
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.27 E-value=8.4e-06 Score=73.46 Aligned_cols=92 Identities=18% Similarity=0.153 Sum_probs=63.6
Q ss_pred CHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccC-CCC-CcchHHHHHHHHHHcCCCceEEEecCCC
Q 017781 213 SWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQ-LDY-VPATIMALEEVVKATQGRIPVFLDGGVR 286 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~-~~~-~~~~~~~l~~i~~~~~~~i~vi~~GGI~ 286 (366)
..+.++.++. +..+.+ .+.+.++ .+.|+|+|.+++..+.+ ..+ .+..++.+.++++.+ ++||+++|||
T Consensus 100 ~~~~~~~~~~--~~~ig~-sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI- 173 (221)
T 1yad_A 100 SPKQIRARFP--HLHIGR-SVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM- 173 (221)
T ss_dssp CHHHHHHHCT--TCEEEE-EECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-
T ss_pred CHHHHHHHCC--CCEEEE-EcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-
Confidence 3344444432 333333 3456666 78999999987642222 111 234678888887776 7999999999
Q ss_pred CHHHHHHHHHhCcCEEEecHHHHH
Q 017781 287 RGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~igr~~l~ 310 (366)
+++++.+++++||++|.+|+.++.
T Consensus 174 ~~~nv~~~~~~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 174 TPDRLRDVKQAGADGIAVMSGIFS 197 (221)
T ss_dssp CGGGHHHHHHTTCSEEEESHHHHT
T ss_pred CHHHHHHHHHcCCCEEEEhHHhhC
Confidence 999999999999999999999864
No 102
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=98.24 E-value=9.8e-07 Score=86.99 Aligned_cols=98 Identities=18% Similarity=0.061 Sum_probs=68.2
Q ss_pred CCCHHHHHHHHHhcC-CCEEEEecc-----------C----HHH-----------HHcC--CcEEEEcCCC-ccCCCCCc
Q 017781 211 SLSWKDVKWLQTITK-LPILVKGVL-----------T----AED-----------VQAG--AAGIIVSNHG-ARQLDYVP 260 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~-~pv~vK~v~-----------~----~~d-----------~~aG--ad~I~vs~~g-g~~~~~~~ 260 (366)
.+..+.++.+|+.++ -||.+|... + .++ .++| +|+|.|+... ..+.+..+
T Consensus 219 r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~ 298 (407)
T 3tjl_A 219 RLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSE 298 (407)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCG
T ss_pred HHHHHHHHHHHHHhCCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCc
Confidence 356788999999985 489999763 2 111 2348 9999997421 11111111
Q ss_pred c-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHh---C-cCEEEecHHHHH
Q 017781 261 A-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---G-ASGIFIGRPVVY 310 (366)
Q Consensus 261 ~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalal---G-Ad~V~igr~~l~ 310 (366)
. .+..+..+++.. ++|||++|||.+..|+.+++.. | ||+|++||+|+.
T Consensus 299 ~~~~~~~~~ir~~~--~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~ia 351 (407)
T 3tjl_A 299 EDQAGDNEFVSKIW--KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTS 351 (407)
T ss_dssp GGCCCCSHHHHHHC--CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHH
T ss_pred cchhHHHHHHHHHh--CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhh
Confidence 1 113345566666 6899999999999988888876 5 999999999986
No 103
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.24 E-value=8.8e-06 Score=74.25 Aligned_cols=167 Identities=15% Similarity=0.140 Sum_probs=106.9
Q ss_pred EEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhh
Q 017781 126 FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVA 205 (366)
Q Consensus 126 ~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (366)
.+-+....+.+...++++.+.+.|++.+-+|++.|..-.-.+.++..+ |. +... ..........+........++.
T Consensus 36 vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~--~~-~~iG-aGTVlt~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 36 VIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQ--PE-MLIG-AGTILNGEQALAAKEAGATFVV 111 (232)
T ss_dssp EEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TT-CEEE-EECCCSHHHHHHHHHHTCSEEE
T ss_pred EEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhC--CC-CEEe-ECCcCCHHHHHHHHHcCCCEEE
Confidence 445555678888888888899999999999998876444444455544 21 1110 0000000000000001111221
Q ss_pred hccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 206 GQIDRSLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 206 ~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
-|.++.+.++..++. ++|++. |+.|+.+ .++|+|.|.+.-.. .. + ..+.|+.++..++ ++|+++
T Consensus 112 ---sP~~~~~vi~~~~~~-gi~~ip-Gv~TptEi~~A~~~Gad~vK~FPa~--~~-g---G~~~lkal~~p~p-~ip~~p 179 (232)
T 4e38_A 112 ---SPGFNPNTVRACQEI-GIDIVP-GVNNPSTVEAALEMGLTTLKFFPAE--AS-G---GISMVKSLVGPYG-DIRLMP 179 (232)
T ss_dssp ---CSSCCHHHHHHHHHH-TCEEEC-EECSHHHHHHHHHTTCCEEEECSTT--TT-T---HHHHHHHHHTTCT-TCEEEE
T ss_pred ---eCCCCHHHHHHHHHc-CCCEEc-CCCCHHHHHHHHHcCCCEEEECcCc--cc-c---CHHHHHHHHHHhc-CCCeee
Confidence 245667778777764 887666 6789888 99999999985421 11 1 3466777765553 799999
Q ss_pred ecCCCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 282 DGGVRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 282 ~GGI~~~~dv~kalalGAd~V~igr~~l 309 (366)
.|||. .+++..++++||.+|.+|+.+.
T Consensus 180 tGGI~-~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 180 TGGIT-PSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp BSSCC-TTTHHHHHTSTTBCCEEECGGG
T ss_pred EcCCC-HHHHHHHHHCCCeEEEECchhc
Confidence 99995 8999999999999999998764
No 104
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.24 E-value=4.1e-06 Score=77.59 Aligned_cols=75 Identities=15% Similarity=0.193 Sum_probs=55.2
Q ss_pred ccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCC---CceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 233 VLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 233 v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
+.++++ .+.|+|.|-+.|...+.. ...++.+.++++.++. ++|+++.|||.+++|+.++.. |||+|.||
T Consensus 161 v~~~~E~~~a~~~gad~IGvn~~~l~~~---~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-Ga~gvlVG 236 (254)
T 1vc4_A 161 VHTERELEIALEAGAEVLGINNRDLATL---HINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-LFDAVLIG 236 (254)
T ss_dssp ECSHHHHHHHHHHTCSEEEEESBCTTTC---CBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-TCSEEEEC
T ss_pred ECCHHHHHHHHHcCCCEEEEccccCcCC---CCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-CCCEEEEe
Confidence 345555 778888887776543222 2234455555555543 689999999999999999999 99999999
Q ss_pred HHHHHH
Q 017781 306 RPVVYS 311 (366)
Q Consensus 306 r~~l~~ 311 (366)
++++.+
T Consensus 237 sAl~~~ 242 (254)
T 1vc4_A 237 TSLMRA 242 (254)
T ss_dssp HHHHTS
T ss_pred HHHcCC
Confidence 999864
No 105
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.19 E-value=3.5e-06 Score=77.03 Aligned_cols=70 Identities=14% Similarity=0.244 Sum_probs=57.5
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHh-----C-cCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL-----G-ASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalal-----G-Ad~V~igr~~l~~ 311 (366)
.++|++.|.+++....+...+ +.++.+.++++.+ ++|||++|||++++|+.+++.+ | ||+|++|++++.+
T Consensus 154 ~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~ 229 (241)
T 1qo2_A 154 KEYGLEEIVHTEIEKDGTLQE-HDFSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEG 229 (241)
T ss_dssp HTTTCCEEEEEETTHHHHTCC-CCHHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTT
T ss_pred HhCCCCEEEEEeecccccCCc-CCHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcC
Confidence 789999999876431111123 3688999999888 8999999999999999999998 9 9999999999764
No 106
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.17 E-value=5e-06 Score=76.66 Aligned_cols=93 Identities=15% Similarity=0.147 Sum_probs=63.8
Q ss_pred CHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCC-CccCCCCCcchHHHHHHHHH-HcCCC-ceEEEecCC
Q 017781 213 SWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNH-GARQLDYVPATIMALEEVVK-ATQGR-IPVFLDGGV 285 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~-gg~~~~~~~~~~~~l~~i~~-~~~~~-i~vi~~GGI 285 (366)
+++..+.+.+. +..++-....++.- .++|+++|.--+. -|+ ..|..+.+.|..+++ .. + +|||++|||
T Consensus 113 tv~aa~~L~k~-Gf~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGs--G~Gi~~~~~L~~i~~~~~--~~vPVI~~GGI 187 (268)
T 2htm_A 113 TLKAAERLIEE-DFLVLPYMGPDLVLAKRLAALGTATVMPLAAPIGS--GWGVRTRALLELFAREKA--SLPPVVVDAGL 187 (268)
T ss_dssp HHHHHHHHHHT-TCEECCEECSCHHHHHHHHHHTCSCBEEBSSSTTT--CCCSTTHHHHHHHHHTTT--TSSCBEEESCC
T ss_pred HHHHHHHHHHC-CCEEeeccCCCHHHHHHHHhcCCCEEEecCccCcC--CcccCCHHHHHHHHHhcC--CCCeEEEeCCC
Confidence 34444444442 33333233455543 8899999965232 121 124456677888877 43 6 999999999
Q ss_pred CCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 286 RRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 286 ~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.+++|+.+++.+|||+|++|+.+..
T Consensus 188 ~tpsDAa~AmeLGAdgVlVgSAI~~ 212 (268)
T 2htm_A 188 GLPSHAAEVMELGLDAVLVNTAIAE 212 (268)
T ss_dssp CSHHHHHHHHHTTCCEEEESHHHHT
T ss_pred CCHHHHHHHHHcCCCEEEEChHHhC
Confidence 9999999999999999999998864
No 107
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.16 E-value=5.8e-06 Score=75.59 Aligned_cols=67 Identities=25% Similarity=0.353 Sum_probs=54.6
Q ss_pred HHcCCcEEEEcCC--CccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHh---CcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalal---GAd~V~igr~~l~ 310 (366)
.+.|+|.|.+++. +|. ..+ ..++.+.++++.+ ++||+++|||++++|+.+++++ |||+|++|++++.
T Consensus 156 ~~~G~~~i~~~~~~~~~~--~~g-~~~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~ 227 (244)
T 1vzw_A 156 NKEGCARYVVTDIAKDGT--LQG-PNLELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYA 227 (244)
T ss_dssp HHTTCCCEEEEEC---------C-CCHHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHT
T ss_pred HhCCCCEEEEeccCcccc--cCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHc
Confidence 7899999988653 221 112 3688888988877 7999999999999999999999 9999999999875
No 108
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.16 E-value=5.5e-06 Score=75.94 Aligned_cols=70 Identities=20% Similarity=0.289 Sum_probs=56.6
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.+.|++.|.+++.+..+...++ .++.+.++++.+ ++|||+.|||++.+|+.+++.+|||+|++|+.++.+
T Consensus 162 ~~~G~~~i~~~~~~~~g~~~g~-~~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~ 231 (252)
T 1ka9_F 162 VELGAGEILLTSMDRDGTKEGY-DLRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFG 231 (252)
T ss_dssp HHHTCCEEEEEETTTTTTCSCC-CHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTT
T ss_pred HHcCCCEEEEecccCCCCcCCC-CHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcC
Confidence 6889999987642211112233 688999999887 899999999999999999999999999999998753
No 109
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.15 E-value=6.2e-06 Score=75.03 Aligned_cols=69 Identities=22% Similarity=0.361 Sum_probs=55.0
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|.|.+.+........+ ..++.+.++++.+ ++||+++|||.+.+|+.+++.+|||+|++|+.++.
T Consensus 164 ~~~G~d~i~~~~~~~~g~~~~-~~~~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 164 EELGAGEILLTSIDRDGTGLG-YDVELIRRVADSV--RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHTCSEEEEEETTTTTTCSC-CCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HhCCCCEEEEecccCCCCcCc-CCHHHHHHHHHhc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHc
Confidence 788999999865321111112 3677888888876 79999999999999999999999999999999865
No 110
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.14 E-value=3.1e-06 Score=77.30 Aligned_cols=69 Identities=22% Similarity=0.287 Sum_probs=55.5
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHh---CcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalal---GAd~V~igr~~l~ 310 (366)
.++|++.|.+++....+...+ ..++.+.++++.+ ++|||++|||.+.+|+.+++++ |||+|++||.++.
T Consensus 159 ~~~G~~~i~~~~~~~~~~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~ 230 (244)
T 2y88_A 159 DSEGCSRFVVTDITKDGTLGG-PNLDLLAGVADRT--DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYA 230 (244)
T ss_dssp HHTTCCCEEEEETTTTTTTSC-CCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHT
T ss_pred HhCCCCEEEEEecCCccccCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHC
Confidence 788999998876321111123 3688888888766 7999999999999999999998 9999999999875
No 111
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.11 E-value=6.1e-06 Score=75.71 Aligned_cols=69 Identities=16% Similarity=0.231 Sum_probs=54.9
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.+.|++.|.++.........+ ..++.+.++++.+ ++|||++|||++.+|+.+++.+|||+|++|+.++.
T Consensus 161 ~~~G~~~i~~~~~~~~g~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~ 229 (253)
T 1thf_D 161 EKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 229 (253)
T ss_dssp HHTTCSEEEEEETTTTTSCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHCCCCEEEEEeccCCCCCCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHc
Confidence 788999998864221111123 3678888888766 79999999999999999999999999999999875
No 112
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.11 E-value=3.6e-05 Score=70.89 Aligned_cols=133 Identities=19% Similarity=0.257 Sum_probs=87.3
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
..|.....+.+++++++|++.+-+.+- .+.=+| +-.
T Consensus 36 saD~~~L~~~i~~l~~~G~d~lHvDVm------------Dg~FVp--------------------------------nit 71 (246)
T 3inp_A 36 SADLARLGDDVKAVLAAGADNIHFDVM------------DNHYVP--------------------------------NLT 71 (246)
T ss_dssp GSCGGGHHHHHHHHHHTTCCCEEEEEE------------BSSSSS--------------------------------CBC
T ss_pred cCChhhHHHHHHHHHHcCCCEEEEEec------------CCCcCc--------------------------------chh
Confidence 457777788899999999987654331 000011 012
Q ss_pred CCHHHHHHHHHhc-CCCEEEEec-cCHHH-----HHcCCcEEEEcCCCccC-----------------------------
Q 017781 212 LSWKDVKWLQTIT-KLPILVKGV-LTAED-----VQAGAAGIIVSNHGARQ----------------------------- 255 (366)
Q Consensus 212 ~~~~~i~~lr~~~-~~pv~vK~v-~~~~d-----~~aGad~I~vs~~gg~~----------------------------- 255 (366)
+....++.+|+.+ ++|+-+... .++++ .++|||+|+++.-....
T Consensus 72 ~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~ 151 (246)
T 3inp_A 72 FGPMVLKALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLK 151 (246)
T ss_dssp CCHHHHHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGT
T ss_pred cCHHHHHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHH
Confidence 3446777888777 778777754 34443 77888888875421100
Q ss_pred --------------------CCCCcchHHHHHHHHHHcC---CCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 256 --------------------LDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 256 --------------------~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l 309 (366)
..+.+.+++-+.++++... .+++|.++|||. .+.+.++..+|||.+.+||++.
T Consensus 152 ~~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf 227 (246)
T 3inp_A 152 YVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIF 227 (246)
T ss_dssp TTGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHH
T ss_pred HHHhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHh
Confidence 0112445666777766542 368999999998 6788899999999999999765
No 113
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.10 E-value=1e-05 Score=74.73 Aligned_cols=52 Identities=21% Similarity=0.396 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHH
Q 017781 264 MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 318 (366)
Q Consensus 264 ~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~ 318 (366)
+.+.++++.. ++||++.+||++++++.++.. +||+|.+|++++..+...+.+
T Consensus 189 ~~v~~vr~~~--~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGSAiVk~i~~~~~~ 240 (252)
T 3tha_A 189 DKVKEIRSFT--NLPIFVGFGIQNNQDVKRMRK-VADGVIVGTSIVKCFKQGNLD 240 (252)
T ss_dssp HHHHHHHTTC--CSCEEEESSCCSHHHHHHHTT-TSSEEEECHHHHHHTTSSCHH
T ss_pred HHHHHHHHhc--CCcEEEEcCcCCHHHHHHHHh-cCCEEEECHHHHHHHHhcCHH
Confidence 3455555544 799999999999999987765 699999999999876544443
No 114
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.08 E-value=0.00018 Score=65.02 Aligned_cols=165 Identities=14% Similarity=0.131 Sum_probs=97.8
Q ss_pred hHHHHHHHHHcCCcee-cCC----C---CCCCHH---HHhccCCCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecC
Q 017781 90 EYATARAASAAGTIMT-LSS----W---STSSVE---EVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 158 (366)
Q Consensus 90 e~~la~aa~~~G~~~~-vs~----~---~~~~~e---~i~~~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd 158 (366)
-...++++.+.|+-++ +.- + .....+ ++++..+.+..+-+|.. |++ +.++.+.++|++.+.++.+
T Consensus 25 ~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vn-d~~---~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 25 LGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIV-EPD---QRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESS-SHH---HHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEec-CHH---HHHHHHHHcCCCEEEEEec
Confidence 3567778888886543 320 1 122233 44444334566777754 433 5677788899999877644
Q ss_pred --CCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEec-cC
Q 017781 159 --TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGV-LT 235 (366)
Q Consensus 159 --~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v-~~ 235 (366)
.+ +...+.++.+++. ++.+++-.. .+
T Consensus 101 ~~~~--------------------------------------------------~~~~~~~~~~~~~-g~~ig~~~~p~t 129 (230)
T 1rpx_A 101 QSST--------------------------------------------------IHLHRTINQIKSL-GAKAGVVLNPGT 129 (230)
T ss_dssp TTTC--------------------------------------------------SCHHHHHHHHHHT-TSEEEEEECTTC
T ss_pred Cccc--------------------------------------------------hhHHHHHHHHHHc-CCcEEEEeCCCC
Confidence 21 0112345556553 444333322 23
Q ss_pred HHH----HHcCCcEEEEcCC--CccCCCCCcchHHHHHHHHHHcC---CCceEEEecCCCCHHHHHHHHHhCcCEEEecH
Q 017781 236 AED----VQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGR 306 (366)
Q Consensus 236 ~~d----~~aGad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGI~~~~dv~kalalGAd~V~igr 306 (366)
..+ ...++|+|.+... |+......+..++.+.++++.++ .++|++++|||+ .+.+.+++++|||+|.+|+
T Consensus 130 ~~e~~~~~~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgS 208 (230)
T 1rpx_A 130 PLTAIEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGS 208 (230)
T ss_dssp CGGGGTTTTTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESH
T ss_pred CHHHHHHHHhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEECh
Confidence 223 4568998854432 22111223344556666665542 268999999998 7899899999999999999
Q ss_pred HHHH
Q 017781 307 PVVY 310 (366)
Q Consensus 307 ~~l~ 310 (366)
++..
T Consensus 209 aI~~ 212 (230)
T 1rpx_A 209 AVFG 212 (230)
T ss_dssp HHHT
T ss_pred hhhC
Confidence 9864
No 115
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.08 E-value=7.5e-05 Score=66.43 Aligned_cols=74 Identities=22% Similarity=0.289 Sum_probs=57.0
Q ss_pred cCHHH----HHcCCcEEEEcCC--CccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHH
Q 017781 234 LTAED----VQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 234 ~~~~d----~~aGad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~ 307 (366)
.+.++ .+.|+|+|.+++. ++......+..++.+.++++.. ++||++.|||. ++++.+++.+||++|.+|+.
T Consensus 116 ~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs~ 192 (215)
T 1xi3_A 116 YSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKTGVDGIAVISA 192 (215)
T ss_dssp SSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTTTCSEEEESHH
T ss_pred CCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEhHH
Confidence 45555 6789999998651 2111112345788888888776 79999999999 99999999999999999999
Q ss_pred HHH
Q 017781 308 VVY 310 (366)
Q Consensus 308 ~l~ 310 (366)
++.
T Consensus 193 i~~ 195 (215)
T 1xi3_A 193 VMG 195 (215)
T ss_dssp HHT
T ss_pred HhC
Confidence 864
No 116
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=98.07 E-value=8.3e-05 Score=73.22 Aligned_cols=41 Identities=20% Similarity=0.133 Sum_probs=34.8
Q ss_pred HHHHcCCCceEEEecCCCCHHHHHHHHHh-CcCEEEecHHHHHH
Q 017781 269 VVKATQGRIPVFLDGGVRRGTDVFKALAL-GASGIFIGRPVVYS 311 (366)
Q Consensus 269 i~~~~~~~i~vi~~GGI~~~~dv~kalal-GAd~V~igr~~l~~ 311 (366)
+++.+ ++|||+.|||.+..++.+.+.. +||+|.+||+||..
T Consensus 313 ir~~~--~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~iad 354 (400)
T 4gbu_A 313 VYSIW--KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFISN 354 (400)
T ss_dssp HHHHC--CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHHC
T ss_pred HHHHh--CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHHC
Confidence 45555 7899999999999999888876 59999999999863
No 117
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=98.05 E-value=0.00025 Score=64.33 Aligned_cols=92 Identities=24% Similarity=0.185 Sum_probs=63.0
Q ss_pred CHHHHHHHHHhcCCCEEEEec-----cCHHH--------HHcCCcEEEEcCCCcc------CCCCCcchHH---HHHHHH
Q 017781 213 SWKDVKWLQTITKLPILVKGV-----LTAED--------VQAGAAGIIVSNHGAR------QLDYVPATIM---ALEEVV 270 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v-----~~~~d--------~~aGad~I~vs~~gg~------~~~~~~~~~~---~l~~i~ 270 (366)
..++|+.+++..+. ..+|.+ ++.++ .++|+|+|..|...+. ..+.+..+.+ .+.+..
T Consensus 100 v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i 178 (226)
T 1vcv_A 100 VRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYI 178 (226)
T ss_dssp HHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHH
Confidence 45678888887743 367744 46554 8999999998753220 0112223444 444443
Q ss_pred HHcCCCceEEEecCCCCHHHHHHHHHh---CcC----EEEec
Q 017781 271 KATQGRIPVFLDGGVRRGTDVFKALAL---GAS----GIFIG 305 (366)
Q Consensus 271 ~~~~~~i~vi~~GGI~~~~dv~kalal---GAd----~V~ig 305 (366)
+.++++++|-++||||+.+|+.+.+.+ ||+ -++..
T Consensus 179 ~~~g~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 179 KEKGYRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp HHHTCCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred HHhCCCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecC
Confidence 447778999999999999999999999 999 66554
No 118
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.04 E-value=9.2e-06 Score=83.41 Aligned_cols=70 Identities=17% Similarity=0.125 Sum_probs=58.1
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHH-hCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kala-lGAd~V~igr~~l~~ 311 (366)
.++|++.|.+.+...-+...| +.++.+.++++.+ ++|||++|||++.+|+.+++. +||++|++|++|+..
T Consensus 462 ~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~ 532 (555)
T 1jvn_A 462 EALGAGEILLNCIDKDGSNSG-YDLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRG 532 (555)
T ss_dssp HHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTT
T ss_pred HHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcC
Confidence 899999999865321112234 3799999999988 899999999999999999998 899999999998653
No 119
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.03 E-value=2.9e-05 Score=69.66 Aligned_cols=90 Identities=18% Similarity=0.155 Sum_probs=66.9
Q ss_pred CCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCC
Q 017781 211 SLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 286 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~ 286 (366)
..+.+.++..++ .+.|++. ++.|+++ .++|+|+|.+.. . ..-+ ..+.|+.++..++ ++|+++.|||.
T Consensus 91 ~~d~~v~~~~~~-~g~~~i~-G~~t~~e~~~A~~~Gad~v~~fp--a-~~~g---G~~~lk~l~~~~~-~ipvvaiGGI~ 161 (207)
T 2yw3_A 91 GLLEEVAALAQA-RGVPYLP-GVLTPTEVERALALGLSALKFFP--A-EPFQ---GVRVLRAYAEVFP-EVRFLPTGGIK 161 (207)
T ss_dssp SCCHHHHHHHHH-HTCCEEE-EECSHHHHHHHHHTTCCEEEETT--T-TTTT---HHHHHHHHHHHCT-TCEEEEBSSCC
T ss_pred CCCHHHHHHHHH-hCCCEEe-cCCCHHHHHHHHHCCCCEEEEec--C-cccc---CHHHHHHHHhhCC-CCcEEEeCCCC
Confidence 345555566655 6888777 4778877 889999999843 1 1111 2456777776654 79999999996
Q ss_pred CHHHHHHHHHhCcCEEEecHHHHH
Q 017781 287 RGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.+++...+++||++|.+|+.++.
T Consensus 162 -~~n~~~~l~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 162 -EEHLPHYAALPNLLAVGGSWLLQ 184 (207)
T ss_dssp -GGGHHHHHTCSSBSCEEESGGGS
T ss_pred -HHHHHHHHhCCCcEEEEehhhhC
Confidence 79999999999999999998753
No 120
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.02 E-value=5.8e-05 Score=75.28 Aligned_cols=116 Identities=13% Similarity=0.191 Sum_probs=81.4
Q ss_pred HHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHH
Q 017781 217 VKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVF 292 (366)
Q Consensus 217 i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~ 292 (366)
++..++ .+.-+ +-.+.+.++ .++|+|.|-+.|++-+. -...++...++.+.++.++++|+.|||.+++|+.
T Consensus 150 ~~~a~~-lgm~~-LvEvh~~eE~~~A~~lga~iIGinnr~L~t---~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~ 224 (452)
T 1pii_A 150 AAVAHS-LEMGV-LTEVSNEEEQERAIALGAKVVGINNRDLRD---LSIDLNRTRELAPKLGHNVTVISESGINTYAQVR 224 (452)
T ss_dssp HHHHHH-TTCEE-EEEECSHHHHHHHHHTTCSEEEEESEETTT---TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHH
T ss_pred HHHHHH-cCCeE-EEEeCCHHHHHHHHHCCCCEEEEeCCCCCC---CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHH
Confidence 444444 35543 345677777 88999999888865322 2345666667777777789999999999999999
Q ss_pred HHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhc
Q 017781 293 KALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 347 (366)
Q Consensus 293 kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~ 347 (366)
++..+ ||+|.||+.++.+- -+...++.|.. .....||.++.++..
T Consensus 225 ~~~~~-a~avLVGealmr~~------d~~~~~~~l~~---~~~KICGit~~eda~ 269 (452)
T 1pii_A 225 ELSHF-ANGFLIGSALMAHD------DLHAAVRRVLL---GENKVCGLTRGQDAK 269 (452)
T ss_dssp HHTTT-CSEEEECHHHHTCS------CHHHHHHHHHH---CSCEECCCCSHHHHH
T ss_pred HHHHh-CCEEEEcHHHcCCc------CHHHHHHHHHH---HhccccCCCcHHHHH
Confidence 99999 99999999998641 12223333321 234678988887775
No 121
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.01 E-value=5.8e-05 Score=69.38 Aligned_cols=50 Identities=8% Similarity=0.174 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 262 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.++...++...++.++.+|+.+||++++|+.++...|+|+|.||..||.+
T Consensus 190 dl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGealmr~ 239 (258)
T 4a29_A 190 NKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRN 239 (258)
T ss_dssp CHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHHHHHC
T ss_pred CHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHHHhCC
Confidence 45555666667777889999999999999999999999999999999974
No 122
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.00 E-value=2.9e-05 Score=69.92 Aligned_cols=91 Identities=15% Similarity=0.165 Sum_probs=63.9
Q ss_pred HHHHHHhcCCCEEEEe-ccCHHH----HHcCCcEEEEcC--CCccCCC-CCcchHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 217 VKWLQTITKLPILVKG-VLTAED----VQAGAAGIIVSN--HGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 217 i~~lr~~~~~pv~vK~-v~~~~d----~~aGad~I~vs~--~gg~~~~-~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
+..+++..+. +++.. +.+.++ .+.|+|+|.++. .++.... ..+..++.+.++++.++ ++||++.|||. +
T Consensus 107 ~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~ 183 (227)
T 2tps_A 107 AKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-I 183 (227)
T ss_dssp HHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-T
T ss_pred HHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-H
Confidence 4555555554 34443 256655 778999999753 1111111 23346778888877662 39999999999 9
Q ss_pred HHHHHHHHhCcCEEEecHHHHH
Q 017781 289 TDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 289 ~dv~kalalGAd~V~igr~~l~ 310 (366)
+++.+++.+||++|.+|+.++.
T Consensus 184 ~nv~~~~~~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 184 DNAAPVIQAGADGVSMISAISQ 205 (227)
T ss_dssp TTSHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEhHHhhc
Confidence 9999999999999999999864
No 123
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.00 E-value=0.0001 Score=68.07 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=65.2
Q ss_pred HHHHHHhcCCCEEEEeccCHHH----HHc-CCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHH
Q 017781 217 VKWLQTITKLPILVKGVLTAED----VQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 291 (366)
Q Consensus 217 i~~lr~~~~~pv~vK~v~~~~d----~~a-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv 291 (366)
++..++ .+.-++ -.+.+.++ .++ |+|.|-+.|.+-+. -...++...++.+.++.++++|+.|||.+++|+
T Consensus 143 ~~~a~~-lGl~~l-vEv~~~eE~~~A~~l~g~~iIGinnr~l~t---~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv 217 (251)
T 1i4n_A 143 YEAAEE-LGMDSL-VEVHSREDLEKVFSVIRPKIIGINTRDLDT---FEIKKNVLWELLPLVPDDTVVVAESGIKDPREL 217 (251)
T ss_dssp HHHHHT-TTCEEE-EEECSHHHHHHHHTTCCCSEEEEECBCTTT---CCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGH
T ss_pred HHHHHH-cCCeEE-EEeCCHHHHHHHHhcCCCCEEEEeCccccc---CCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHH
Confidence 344444 355433 35667776 788 99999888865322 223345555666666667899999999999999
Q ss_pred HHHHHhCcCEEEecHHHHHH
Q 017781 292 FKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 292 ~kalalGAd~V~igr~~l~~ 311 (366)
.++..+ ||+|.||+.++.+
T Consensus 218 ~~~~~~-a~avLVG~aimr~ 236 (251)
T 1i4n_A 218 KDLRGK-VNAVLVGTSIMKA 236 (251)
T ss_dssp HHHTTT-CSEEEECHHHHHC
T ss_pred HHHHHh-CCEEEEcHHHcCC
Confidence 999999 9999999999874
No 124
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.00 E-value=0.00013 Score=65.38 Aligned_cols=92 Identities=13% Similarity=0.181 Sum_probs=58.0
Q ss_pred HHHHHHHhcCCCEEEEec--cCHHH----HHcCCcEEEEcC-C-CccCCCCCcchHHHHHHHHHHcC---CCceEEEecC
Q 017781 216 DVKWLQTITKLPILVKGV--LTAED----VQAGAAGIIVSN-H-GARQLDYVPATIMALEEVVKATQ---GRIPVFLDGG 284 (366)
Q Consensus 216 ~i~~lr~~~~~pv~vK~v--~~~~d----~~aGad~I~vs~-~-gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GG 284 (366)
.++++++. +.++ .+.+ .+..+ ...++|.|.+.. + |+......+..++.+.++++... .++|++++||
T Consensus 101 ~~~~~~~~-g~~i-~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GG 178 (220)
T 2fli_A 101 ALQKIKAA-GMKA-GVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGG 178 (220)
T ss_dssp HHHHHHHT-TSEE-EEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred HHHHHHHc-CCcE-EEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECc
Confidence 45555553 4443 3333 23333 456789886532 2 22112223444555666655442 2689999999
Q ss_pred CCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
|+ .+++.+++.+|||+|.+||++..
T Consensus 179 I~-~~~~~~~~~~Gad~vvvGsai~~ 203 (220)
T 2fli_A 179 VD-NKTIRACYEAGANVFVAGSYLFK 203 (220)
T ss_dssp CC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred CC-HHHHHHHHHcCCCEEEEChHHhC
Confidence 99 89999999999999999999864
No 125
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=97.99 E-value=1.1e-05 Score=73.90 Aligned_cols=69 Identities=19% Similarity=0.241 Sum_probs=54.8
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|.|.++...+.. ......++.+.++++.+ ++||+++|||++.+|+.++++.|||+|++|++++.
T Consensus 45 ~~~G~~~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~ 113 (247)
T 3tdn_A 45 EKRGAGEILLTSIDRDG-TKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 113 (247)
T ss_dssp HHTTCSEEEEEETTTTT-CSSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHHH
T ss_pred HHcCCCEEEEEecCccc-CCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhh
Confidence 56799999886532111 11234678888888877 89999999999999999999999999999998763
No 126
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.97 E-value=8.3e-05 Score=67.85 Aligned_cols=84 Identities=21% Similarity=0.208 Sum_probs=57.9
Q ss_pred HHHHHHHHHh---cCCCEEEEec-----cCHHH--------HHcCCcEEEEcCCCccCCCC-CcchHHHHHH--HHHHcC
Q 017781 214 WKDVKWLQTI---TKLPILVKGV-----LTAED--------VQAGAAGIIVSNHGARQLDY-VPATIMALEE--VVKATQ 274 (366)
Q Consensus 214 ~~~i~~lr~~---~~~pv~vK~v-----~~~~d--------~~aGad~I~vs~~gg~~~~~-~~~~~~~l~~--i~~~~~ 274 (366)
.+++..+++. |+.| +|.+ ++.++ .++|||+|..|...+ . +..+.+.+.. .++.++
T Consensus 119 ~~ei~~v~~a~~~~g~~--lKvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG~~----~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 119 YREVSGIVKLAKSYGAV--VKVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTGVY----TKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp HHHHHHHHHHHHHTTCE--EEEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCSSS----CCCCSHHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHhhcCCe--EEEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCCHHHHHHHHHHHHHC
Confidence 3456666654 3454 4755 35444 999999999875211 1 2245555555 666664
Q ss_pred CCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 275 GRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 275 ~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
+||-++||||+.+|+++.+.+||+-++..
T Consensus 193 --v~VKaaGGirt~~~al~~i~aGa~RiG~S 221 (234)
T 1n7k_A 193 --MGVKASGGIRSGIDAVLAVGAGADIIGTS 221 (234)
T ss_dssp --CEEEEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred --CCEEEecCCCCHHHHHHHHHcCccccchH
Confidence 99999999999999999999999944443
No 127
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.96 E-value=0.00016 Score=67.16 Aligned_cols=63 Identities=29% Similarity=0.506 Sum_probs=51.3
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCC--CHHHHHHHH----HhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR--RGTDVFKAL----ALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~--~~~dv~kal----alGAd~V~igr~~l~~ 311 (366)
.++|+|+|.++-. ...+.+.++++.+ +.+||+++|||+ +.+|+.+.+ ..||+++.+||.++.+
T Consensus 169 ~~~GAD~vkt~~~---------~~~e~~~~~~~~~-~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~ 237 (263)
T 1w8s_A 169 LELGADAMKIKYT---------GDPKTFSWAVKVA-GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQR 237 (263)
T ss_dssp HHHTCSEEEEECC---------SSHHHHHHHHHHT-TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTS
T ss_pred HHcCCCEEEEcCC---------CCHHHHHHHHHhC-CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCC
Confidence 8899999998731 2457788888777 235999999999 889888777 8999999999998653
No 128
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.93 E-value=0.00039 Score=62.88 Aligned_cols=93 Identities=16% Similarity=0.186 Sum_probs=62.7
Q ss_pred HHHHHHHHhcCCCEEEEec-cCHHH-----HHc--CCcEEEEcC-CCc-cCCCCCcchHHHHHHHHHHcCCCceEEEecC
Q 017781 215 KDVKWLQTITKLPILVKGV-LTAED-----VQA--GAAGIIVSN-HGA-RQLDYVPATIMALEEVVKATQGRIPVFLDGG 284 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~vK~v-~~~~d-----~~a--Gad~I~vs~-~gg-~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GG 284 (366)
+.++.+++. ++++++-.- .++.+ .+. ++|+|.+.. ++| ......+..++.+.++++..+ ++||+++||
T Consensus 104 ~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~-~~pi~v~GG 181 (228)
T 1h1y_A 104 ELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYP-SLDIEVDGG 181 (228)
T ss_dssp HHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TSEEEEESS
T ss_pred HHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcC-CCCEEEECC
Confidence 456666664 555555432 12222 333 999998743 222 112234456677888877653 789999999
Q ss_pred CCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
|.. +.+.+++..|||.+.+|+.++.
T Consensus 182 I~~-~ni~~~~~aGaD~vvvGsai~~ 206 (228)
T 1h1y_A 182 LGP-STIDVAASAGANCIVAGSSIFG 206 (228)
T ss_dssp CST-TTHHHHHHHTCCEEEESHHHHT
T ss_pred cCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 987 8898999999999999999864
No 129
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.93 E-value=1e-05 Score=75.26 Aligned_cols=68 Identities=12% Similarity=0.162 Sum_probs=53.0
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCC--CceEEEecCCCCHHHHHHHHHh--CcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG--RIPVFLDGGVRRGTDVFKALAL--GASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~--~i~vi~~GGI~~~~dv~kalal--GAd~V~igr~~ 308 (366)
.++ ++.|.++....-+...|+ .++.+.++.++++. ++|||++|||++.+|+.+++.+ ||++|++|+++
T Consensus 168 ~~~-a~~il~t~i~~dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 168 RKY-TNEFLIHAADVEGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp TTT-CSEEEEEC-------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred HHh-cCEEEEEeeccccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 667 899988653221223454 89999999988732 6999999999999999999998 99999999997
No 130
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.91 E-value=5e-05 Score=68.39 Aligned_cols=164 Identities=16% Similarity=0.184 Sum_probs=93.4
Q ss_pred hhHHHHHHHHHcCCcee-cCC-----CCCCCHHHHhccCC-CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCC
Q 017781 89 GEYATARAASAAGTIMT-LSS-----WSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (366)
Q Consensus 89 ~e~~la~aa~~~G~~~~-vs~-----~~~~~~e~i~~~~~-~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~ 161 (366)
....+++.. +.|+... ++. .....++++++..+ .+.++-++....++. .++.+.++|++.+.++...+
T Consensus 20 ~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~---~~~~~~~aGad~i~vh~~~~- 94 (218)
T 3jr2_A 20 DAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAI---LSRMAFEAGADWITVSAAAH- 94 (218)
T ss_dssp HHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHH---HHHHHHHHTCSEEEEETTSC-
T ss_pred HHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHH---HHHHHHhcCCCEEEEecCCC-
Confidence 345666664 3344443 331 12233566666643 355555555433332 55778889999987753211
Q ss_pred CcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCH-HHHHHHHHhcCCCEEEE--eccCHHH
Q 017781 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSW-KDVKWLQTITKLPILVK--GVLTAED 238 (366)
Q Consensus 162 ~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~i~~lr~~~~~pv~vK--~v~~~~d 238 (366)
..+. +.++.+++. +++..+. ++.|.++
T Consensus 95 -------------------------------------------------~~~~~~~~~~~~~~-g~~~~~d~l~~~T~~~ 124 (218)
T 3jr2_A 95 -------------------------------------------------IATIAACKKVADEL-NGEIQIEIYGNWTMQD 124 (218)
T ss_dssp -------------------------------------------------HHHHHHHHHHHHHH-TCEEEEECCSSCCHHH
T ss_pred -------------------------------------------------HHHHHHHHHHHHHh-CCccceeeeecCCHHH
Confidence 0011 234444443 5554432 3356654
Q ss_pred ----HHcCCcEEEEcCC--Ccc-CCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 ----VQAGAAGIIVSNH--GAR-QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ----~~aGad~I~vs~~--gg~-~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.+.|+|.+++... .+. .....+..++.++++. +.++|++++||| +.+.+.+++++|||.|.+||++..+
T Consensus 125 ~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~---~~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~a 200 (218)
T 3jr2_A 125 AKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLS---ALGIELSITGGI-VPEDIYLFEGIKTKTFIAGRALAGA 200 (218)
T ss_dssp HHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHH---HTTCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGSHH
T ss_pred HHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHh---CCCCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhcCC
Confidence 5679998876321 110 0112233344444443 237999999999 5899999999999999999987643
No 131
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.88 E-value=0.0002 Score=64.89 Aligned_cols=162 Identities=15% Similarity=0.173 Sum_probs=94.4
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
..+.+...+.++.+.+.|++.+.++...+..-...+.++..+ |. +... ......+...+........++ .-|.
T Consensus 25 ~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~--~~-l~vg-aGtvl~~d~~~~A~~aGAd~v---~~p~ 97 (224)
T 1vhc_A 25 LDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANR--PD-FLIA-AGTVLTAEQVVLAKSSGADFV---VTPG 97 (224)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TT-CEEE-EESCCSHHHHHHHHHHTCSEE---ECSS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhC--cC-cEEe-eCcEeeHHHHHHHHHCCCCEE---EECC
Confidence 455555566677777777887777766554322233344433 21 1100 000000000000000000111 1234
Q ss_pred CCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 212 LSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 212 ~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
.+.+.++..|+ .+.|+++ |+.|+.+ .++|+|+|.+.. .. .....+.|++++..++ ++|+++.||| +
T Consensus 98 ~d~~v~~~ar~-~g~~~i~-Gv~t~~e~~~A~~~Gad~vk~Fp--a~----~~gG~~~lk~l~~~~~-~ipvvaiGGI-~ 167 (224)
T 1vhc_A 98 LNPKIVKLCQD-LNFPITP-GVNNPMAIEIALEMGISAVKFFP--AE----ASGGVKMIKALLGPYA-QLQIMPTGGI-G 167 (224)
T ss_dssp CCHHHHHHHHH-TTCCEEC-EECSHHHHHHHHHTTCCEEEETT--TT----TTTHHHHHHHHHTTTT-TCEEEEBSSC-C
T ss_pred CCHHHHHHHHH-hCCCEEe-ccCCHHHHHHHHHCCCCEEEEee--Cc----cccCHHHHHHHHhhCC-CCeEEEECCc-C
Confidence 45666788887 7888777 5888877 888999999843 10 0112566777776554 6999999999 5
Q ss_pred HHHHHHHHHh-CcCEEEecHHHHHH
Q 017781 288 GTDVFKALAL-GASGIFIGRPVVYS 311 (366)
Q Consensus 288 ~~dv~kalal-GAd~V~igr~~l~~ 311 (366)
.+++...+++ |+++|. |+.+..+
T Consensus 168 ~~N~~~~l~agga~~v~-gS~i~~~ 191 (224)
T 1vhc_A 168 LHNIRDYLAIPNIVACG-GSWFVEK 191 (224)
T ss_dssp TTTHHHHHTSTTBCCEE-ECGGGCH
T ss_pred HHHHHHHHhcCCCEEEE-EchhcCc
Confidence 6899999998 899999 8877543
No 132
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.87 E-value=7.8e-05 Score=68.50 Aligned_cols=78 Identities=14% Similarity=0.131 Sum_probs=56.9
Q ss_pred eccCHHH----HHcCCcEEEEcCCCccC--CCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 232 GVLTAED----VQAGAAGIIVSNHGARQ--LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 232 ~v~~~~d----~~aGad~I~vs~~gg~~--~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
-+.+.++ .+.|+|+|.+++-..+. .+..+..++.+.++++....++||++.||| +.+++.+++.+||++|.++
T Consensus 141 S~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav~ 219 (243)
T 3o63_A 141 STHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVVV 219 (243)
T ss_dssp EECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEES
T ss_pred eCCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEEe
Confidence 4567776 67899999997633221 111234567777776542237999999999 9999999999999999999
Q ss_pred HHHHH
Q 017781 306 RPVVY 310 (366)
Q Consensus 306 r~~l~ 310 (366)
+.++.
T Consensus 220 sai~~ 224 (243)
T 3o63_A 220 RAITS 224 (243)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 99864
No 133
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.85 E-value=6.6e-05 Score=70.13 Aligned_cols=48 Identities=23% Similarity=0.302 Sum_probs=41.6
Q ss_pred chHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHh
Q 017781 261 ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSL 312 (366)
Q Consensus 261 ~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l 312 (366)
...+.+.++++.. ++||++.|||++++++.++ .|||+|.+|+++...+
T Consensus 189 ~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGSAi~~~~ 236 (271)
T 1ujp_A 189 EVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--AVADGVVVGSALVRAL 236 (271)
T ss_dssp CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--TTSSEEEECHHHHHHH
T ss_pred cHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--cCCCEEEEChHHhccc
Confidence 3456788887765 7999999999999999996 9999999999998764
No 134
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.84 E-value=0.00011 Score=68.63 Aligned_cols=83 Identities=18% Similarity=0.192 Sum_probs=58.0
Q ss_pred CHHHHHHHHHhcCCCEEEEecc------CHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHc-----
Q 017781 213 SWKDVKWLQTITKLPILVKGVL------TAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT----- 273 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~------~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~----- 273 (366)
..++|+.+++..+ +..+|.++ +.+. .++|||+|..|...+ .+..+.+.+.-+++.+
T Consensus 143 v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~----~~gAT~edv~lm~~~v~~~~~ 217 (281)
T 2a4a_A 143 ATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKV----QINATPSSVEYIIKAIKEYIK 217 (281)
T ss_dssp HHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSCS----SCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHHHHHhhc
Confidence 4567888888775 35788763 2231 899999999875211 1223444333333333
Q ss_pred -----CCCceEEEecCCCCHHHHHHHHHhCcC
Q 017781 274 -----QGRIPVFLDGGVRRGTDVFKALALGAS 300 (366)
Q Consensus 274 -----~~~i~vi~~GGI~~~~dv~kalalGAd 300 (366)
+.+++|-++||||+.+|+.+.+.+||+
T Consensus 218 ~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 218 NNPEKNNKIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp HCGGGTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred ccccCCCCceEEEeCCCCCHHHHHHHHHHhhh
Confidence 568999999999999999999999987
No 135
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.81 E-value=0.00011 Score=68.04 Aligned_cols=84 Identities=24% Similarity=0.225 Sum_probs=58.5
Q ss_pred CHHHHHHHHHhcC-CCEEEEecc-----C-HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHH-----
Q 017781 213 SWKDVKWLQTITK-LPILVKGVL-----T-AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA----- 272 (366)
Q Consensus 213 ~~~~i~~lr~~~~-~pv~vK~v~-----~-~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~----- 272 (366)
..++|+.+++..+ .+..+|.++ + .+. .++|||+|..|...+ .+..+.+.+...++.
T Consensus 119 v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVKTSTGf~----~~gAt~e~v~lm~~~I~~~~ 194 (260)
T 1p1x_A 119 GFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKV----AVNATPESARIMMEVIRDMG 194 (260)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEECCCSCS----SCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHHHHHhc
Confidence 4567888887753 245788663 2 331 899999999875211 122455544334443
Q ss_pred cCCCceEEEecCCCCHHHHHHHHHhCcC
Q 017781 273 TQGRIPVFLDGGVRRGTDVFKALALGAS 300 (366)
Q Consensus 273 ~~~~i~vi~~GGI~~~~dv~kalalGAd 300 (366)
++.+++|-++||||+.+|+.+.+.+||+
T Consensus 195 ~g~~v~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 195 VEKTVGFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp CTTTCEEECBSSCCSHHHHHHHHHHHHH
T ss_pred CCCCceEEEeCCCCCHHHHHHHHHhhhh
Confidence 4568999999999999999999999987
No 136
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.80 E-value=0.0001 Score=66.41 Aligned_cols=167 Identities=16% Similarity=0.087 Sum_probs=106.9
Q ss_pred EEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhh
Q 017781 126 FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVA 205 (366)
Q Consensus 126 ~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (366)
.+-+....+.+....+.+.+.+.|++.+-||+++|..-.-.+.++..+ |. +..- ..........+........++.
T Consensus 15 vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~--p~-~~IG-AGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 15 LIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAV--PE-AIVG-AGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp EEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TT-SEEE-EECCCSHHHHHHHHHHTCSEEE
T ss_pred EEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHC--CC-CeEe-eccccCHHHHHHHHHcCCCEEE
Confidence 455556778888889999999999999999999986544445555554 32 1100 0000000000000011111222
Q ss_pred hccCCCCCHHHHHHHHHhcCC------CEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCC
Q 017781 206 GQIDRSLSWKDVKWLQTITKL------PILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG 275 (366)
Q Consensus 206 ~~~d~~~~~~~i~~lr~~~~~------pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~ 275 (366)
.|.++-+.++..++. ++ |++- ++.|+.+ .++|+|.|.+.-.. ..+ -.+.|+.++..++
T Consensus 91 ---sP~~~~evi~~~~~~-~v~~~~~~~~~P-G~~TptE~~~A~~~Gad~vK~FPa~---~~g---G~~~lkal~~p~p- 158 (217)
T 3lab_A 91 ---SPGLTPELIEKAKQV-KLDGQWQGVFLP-GVATASEVMIAAQAGITQLKCFPAS---AIG---GAKLLKAWSGPFP- 158 (217)
T ss_dssp ---ESSCCHHHHHHHHHH-HHHCSCCCEEEE-EECSHHHHHHHHHTTCCEEEETTTT---TTT---HHHHHHHHHTTCT-
T ss_pred ---eCCCcHHHHHHHHHc-CCCccCCCeEeC-CCCCHHHHHHHHHcCCCEEEECccc---ccc---CHHHHHHHHhhhc-
Confidence 255677777777664 55 7554 8899988 99999999885421 111 2466776666553
Q ss_pred CceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 276 RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 276 ~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l 309 (366)
++|++..|||. .+.+..++++||.+|..|+.+.
T Consensus 159 ~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l~ 191 (217)
T 3lab_A 159 DIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWLT 191 (217)
T ss_dssp TCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGGG
T ss_pred CceEEEeCCCC-HHHHHHHHHCCCEEEEEChhhc
Confidence 79999999997 8999999999999987776543
No 137
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.75 E-value=0.00038 Score=65.67 Aligned_cols=60 Identities=27% Similarity=0.430 Sum_probs=45.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH-H----HHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-T----DVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~-~----dv~kalalGAd~V~igr~~l~~ 311 (366)
.++|||+|.++-. + +.+.++++.. .+||++.||+... + .+.+++.+||++|.+||.++..
T Consensus 199 ~elGAD~VKt~~t-~----------e~~~~vv~~~--~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 199 AEMGAQIIKTYYV-E----------KGFERIVAGC--PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp HHTTCSEEEEECC-T----------TTHHHHHHTC--SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred HHhCCCEEEeCCC-H----------HHHHHHHHhC--CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 8999999988621 1 2356666655 7999999999953 3 4556778999999999988653
No 138
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.65 E-value=0.00015 Score=66.27 Aligned_cols=69 Identities=25% Similarity=0.311 Sum_probs=53.2
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|.|.++.-.+.. ......++.+.++++.+ ++||++.|||++.+++.+++++|||+|.+|+.++.
T Consensus 41 ~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 41 DEAGADELVFLDISATH-EERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp HHHTCSCEEEEECCSST-TCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHcCCCEEEEEcCCccc-cCccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 56789998887422110 11223566777777766 79999999999999999999999999999998864
No 139
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.64 E-value=8.4e-05 Score=67.99 Aligned_cols=69 Identities=17% Similarity=0.240 Sum_probs=53.7
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|.|.++...+.. ......++.+.++++.+ ++||++.|||++.+++.+++++|||+|.+|+..+.
T Consensus 40 ~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 40 SEIGIDELVFLDITASV-EKRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHTTCCEEEEEESSCSS-SHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHcCCCEEEEECCchhh-cCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 57899999987643211 11223456777777665 79999999999999999999999999999998764
No 140
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.64 E-value=0.0014 Score=58.85 Aligned_cols=166 Identities=16% Similarity=0.135 Sum_probs=95.0
Q ss_pred EEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhh
Q 017781 127 FQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAG 206 (366)
Q Consensus 127 ~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (366)
+-+....+.+...+.++.+.+.|++.+.++...+..-...+.++..+ |. +... ...+..+...+........++.
T Consensus 19 i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~--~~-~~vg-agtvi~~d~~~~A~~aGAd~v~- 93 (214)
T 1wbh_A 19 VPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEV--PE-AIVG-AGTVLNPQQLAEVTEAGAQFAI- 93 (214)
T ss_dssp EEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHC--TT-SEEE-EESCCSHHHHHHHHHHTCSCEE-
T ss_pred EEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHC--cC-CEEe-eCEEEEHHHHHHHHHcCCCEEE-
Confidence 33444456666667777788888888888877654323333344443 21 1100 0000000000000000001111
Q ss_pred ccCCCCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe
Q 017781 207 QIDRSLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 282 (366)
Q Consensus 207 ~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~ 282 (366)
-|..+.+.++.. +..+.|++. |+.|+++ .++|+|+|.+.. .. .....+.|.+++..++ ++|+++.
T Consensus 94 --~p~~d~~v~~~~-~~~g~~~i~-G~~t~~e~~~A~~~Gad~v~~Fp--a~----~~gG~~~lk~i~~~~~-~ipvvai 162 (214)
T 1wbh_A 94 --SPGLTEPLLKAA-TEGTIPLIP-GISTVSELMLGMDYGLKEFKFFP--AE----ANGGVKALQAIAGPFS-QVRFCPT 162 (214)
T ss_dssp --ESSCCHHHHHHH-HHSSSCEEE-EESSHHHHHHHHHTTCCEEEETT--TT----TTTHHHHHHHHHTTCT-TCEEEEB
T ss_pred --cCCCCHHHHHHH-HHhCCCEEE-ecCCHHHHHHHHHCCCCEEEEec--Cc----cccCHHHHHHHhhhCC-CCeEEEE
Confidence 123344444444 447888776 5888877 889999999833 11 0112566777776554 7999999
Q ss_pred cCCCCHHHHHHHHHh-CcCEEEecHHHHH
Q 017781 283 GGVRRGTDVFKALAL-GASGIFIGRPVVY 310 (366)
Q Consensus 283 GGI~~~~dv~kalal-GAd~V~igr~~l~ 310 (366)
||| +.+++...+++ |+++|. |+.+..
T Consensus 163 GGI-~~~n~~~~l~agg~~~v~-gS~i~~ 189 (214)
T 1wbh_A 163 GGI-SPANYRDYLALKSVLCIG-GSWLVP 189 (214)
T ss_dssp SSC-CTTTHHHHHTSTTBSCEE-EGGGSC
T ss_pred CCC-CHHHHHHHHhcCCCeEEE-eccccC
Confidence 999 56899999999 899999 887754
No 141
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.63 E-value=0.00068 Score=61.70 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=46.7
Q ss_pred cCCcEEEE-cCCCcc-CCCCCcchHHHHHHHHHHcC---CCceEEEecCCCCHHHHHHHHHhCcCEEEec-HHHH
Q 017781 241 AGAAGIIV-SNHGAR-QLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIG-RPVV 309 (366)
Q Consensus 241 aGad~I~v-s~~gg~-~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGI~~~~dv~kalalGAd~V~ig-r~~l 309 (366)
.++|.|.+ +-+.|. .....+..++.+.++++... .+++|.++|||. .+.+.++..+|||.+.+| +.+.
T Consensus 127 ~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif 200 (231)
T 3ctl_A 127 HKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLF 200 (231)
T ss_dssp GGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTG
T ss_pred hcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHh
Confidence 46787753 222221 11234556677777766542 268999999997 677888999999999999 7764
No 142
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.63 E-value=0.00013 Score=68.07 Aligned_cols=66 Identities=17% Similarity=0.135 Sum_probs=54.5
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.+.|.+.|.+...+ .+...+.+.++++.+.+.+||++.|||++.+|+.+++.+|||.|.+|+.++.
T Consensus 196 ad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 196 RAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALEQ 261 (286)
T ss_dssp HHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGSS
T ss_pred HHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhhc
Confidence 56777888887432 3446688889988874469999999999999999999999999999998763
No 143
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.62 E-value=0.00035 Score=63.53 Aligned_cols=164 Identities=15% Similarity=0.185 Sum_probs=97.2
Q ss_pred HHHHHHHHHcCCcee-c----CCCC---CC---CHHHHhccCCCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecC-
Q 017781 91 YATARAASAAGTIMT-L----SSWS---TS---SVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD- 158 (366)
Q Consensus 91 ~~la~aa~~~G~~~~-v----s~~~---~~---~~e~i~~~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd- 158 (366)
....+.+.+.|+-+. + +.+. +. .++++++....++-..|.. .|++ +.++.+.++|++.+.++..
T Consensus 20 ~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv-~dp~---~~i~~~~~aGadgv~vh~e~ 95 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMI-VEPE---KYVEDFAKAGADIISVHVEH 95 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEES-SSGG---GTHHHHHHHTCSEEEEECST
T ss_pred HHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEc-cCHH---HHHHHHHHcCCCEEEECccc
Confidence 356677777787653 2 2211 11 2234444432345545655 4653 3567788899999887644
Q ss_pred -CCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEec-cCH
Q 017781 159 -TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGV-LTA 236 (366)
Q Consensus 159 -~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v-~~~ 236 (366)
.. +...+.++.+++. ++-+.+=.- .|+
T Consensus 96 ~~~--------------------------------------------------~~~~~~~~~i~~~-g~~~gv~~~p~t~ 124 (230)
T 1tqj_A 96 NAS--------------------------------------------------PHLHRTLCQIREL-GKKAGAVLNPSTP 124 (230)
T ss_dssp TTC--------------------------------------------------TTHHHHHHHHHHT-TCEEEEEECTTCC
T ss_pred ccc--------------------------------------------------hhHHHHHHHHHHc-CCcEEEEEeCCCc
Confidence 21 0112345566553 443333322 233
Q ss_pred HH----HHcCCcEEEEcC-CCccC-CCCCcchHHHHHHHHHHcC---CCceEEEecCCCCHHHHHHHHHhCcCEEEecHH
Q 017781 237 ED----VQAGAAGIIVSN-HGARQ-LDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 237 ~d----~~aGad~I~vs~-~gg~~-~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~ 307 (366)
.+ ...++|.|.+.. ++|.. ....+..++.+.++++... .++||.++|||.. +.+.++..+|||.+.+|+.
T Consensus 125 ~e~~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSa 203 (230)
T 1tqj_A 125 LDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSA 203 (230)
T ss_dssp GGGGTTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHH
T ss_pred HHHHHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHH
Confidence 33 445899886543 33211 1234556777777776552 2699999999997 8899999999999999998
Q ss_pred HHH
Q 017781 308 VVY 310 (366)
Q Consensus 308 ~l~ 310 (366)
++.
T Consensus 204 i~~ 206 (230)
T 1tqj_A 204 VFN 206 (230)
T ss_dssp HHT
T ss_pred HHC
Confidence 764
No 144
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.51 E-value=0.00021 Score=64.71 Aligned_cols=69 Identities=26% Similarity=0.346 Sum_probs=54.3
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|+|.++...+.. ......++.+.++++.+ ++||++.|||++.+++.+++++|||+|.++++++.
T Consensus 43 ~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~~ 111 (253)
T 1h5y_A 43 EEEGADEIAILDITAAP-EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAVR 111 (253)
T ss_dssp HHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred HHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHhh
Confidence 67899999887533211 11223567788888777 79999999999999999999999999999998763
No 145
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.48 E-value=0.00042 Score=62.92 Aligned_cols=68 Identities=26% Similarity=0.299 Sum_probs=54.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|.|.+..-.+.. ...+.. +.+.++++.+ ++|+++.|||++++++.+++++|||.|.+|+..+.
T Consensus 41 ~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 41 QRDGAEWIHLVDLDAAF-GRGSNH-ELLAEVVGKL--DVQVELSGGIRDDESLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHTTCSEEEEEEHHHHT-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHcCCCEEEEEcCcccc-cCCChH-HHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhh
Confidence 67899999987522211 122334 7888888877 79999999999999999999999999999997754
No 146
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.46 E-value=0.0012 Score=59.80 Aligned_cols=87 Identities=15% Similarity=0.111 Sum_probs=62.5
Q ss_pred CCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCC
Q 017781 212 LSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVR 286 (366)
Q Consensus 212 ~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~ 286 (366)
.+.+.++. ++..+.|++. |+.|+++ .++|+|+|.+.- . ... ..+.|.+++..++ ++|+++.|||
T Consensus 107 ~d~~v~~~-~~~~g~~~i~-G~~t~~e~~~A~~~Gad~vk~FP--a-----~~~~G~~~lk~i~~~~~-~ipvvaiGGI- 175 (225)
T 1mxs_A 107 ITEDILEA-GVDSEIPLLP-GISTPSEIMMGYALGYRRFKLFP--A-----EISGGVAAIKAFGGPFG-DIRFCPTGGV- 175 (225)
T ss_dssp CCHHHHHH-HHHCSSCEEC-EECSHHHHHHHHTTTCCEEEETT--H-----HHHTHHHHHHHHHTTTT-TCEEEEBSSC-
T ss_pred CCHHHHHH-HHHhCCCEEE-eeCCHHHHHHHHHCCCCEEEEcc--C-----ccccCHHHHHHHHhhCC-CCeEEEECCC-
Confidence 34444444 4447888776 5888877 888999998832 1 111 2456676666553 7999999999
Q ss_pred CHHHHHHHHH-hCcCEEEecHHHHH
Q 017781 287 RGTDVFKALA-LGASGIFIGRPVVY 310 (366)
Q Consensus 287 ~~~dv~kala-lGAd~V~igr~~l~ 310 (366)
+.+.+...++ .||++|. |+.++.
T Consensus 176 ~~~N~~~~l~~~Ga~~v~-gSai~~ 199 (225)
T 1mxs_A 176 NPANVRNYMALPNVMCVG-TTWMLD 199 (225)
T ss_dssp CTTTHHHHHHSTTBCCEE-ECTTSC
T ss_pred CHHHHHHHHhccCCEEEE-EchhcC
Confidence 5788999999 6999999 887754
No 147
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.44 E-value=0.00099 Score=58.90 Aligned_cols=67 Identities=19% Similarity=0.142 Sum_probs=44.4
Q ss_pred HHcCCcEEEEc-CCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVS-NHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs-~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.+.|+|.|.+. +..+......+.. +.++++... ++|++++|||+ .+.+.++++.|||+|.+||+++.
T Consensus 124 ~~~g~d~v~~~~~~~~~~~g~~~~~-~~i~~~~~~---~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 124 RALGAKFVEMHAGLDEQAKPGFDLN-GLLAAGEKA---RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp HHTTCSEEEEECCHHHHTSTTCCTH-HHHHHHHHH---TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHHHT
T ss_pred HHhCCCEEEEEecccccccCCCchH-HHHHHhhCC---CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeeccC
Confidence 56799998443 2111000011122 444444432 68999999998 78899999999999999999864
No 148
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.39 E-value=0.0004 Score=66.69 Aligned_cols=130 Identities=14% Similarity=0.144 Sum_probs=84.2
Q ss_pred CCceecCCCCCCCHHHHhccCCCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccc
Q 017781 101 GTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLT 180 (366)
Q Consensus 101 G~~~~vs~~~~~~~e~i~~~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~ 180 (366)
..|+++++++..+.++++.......|+|+|...+++.+.+.++++++.|+. +++|. |.+
T Consensus 46 ~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~~~~i~~~~~~g~~---v~v~~---g~~--------------- 104 (336)
T 1ypf_A 46 KLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKRISFIRDMQSRGLI---ASISV---GVK--------------- 104 (336)
T ss_dssp SSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTCC---CEEEE---CCS---------------
T ss_pred cCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHHHHHHHHHHhcCCe---EEEeC---CCC---------------
Confidence 357888888888888886532245789999888888888888888876541 12221 000
Q ss_pred cccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcC--CcEEEEcCCCccCCCC
Q 017781 181 LKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDVQAG--AAGIIVSNHGARQLDY 258 (366)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aG--ad~I~vs~~gg~~~~~ 258 (366)
.+.++.++.. .++| +|+|.+....| .
T Consensus 105 ---------------------------------~~~~~~a~~~---------------~~~g~~~~~i~i~~~~G----~ 132 (336)
T 1ypf_A 105 ---------------------------------EDEYEFVQQL---------------AAEHLTPEYITIDIAHG----H 132 (336)
T ss_dssp ---------------------------------HHHHHHHHHH---------------HHTTCCCSEEEEECSSC----C
T ss_pred ---------------------------------HHHHHHHHHH---------------HhcCCCCCEEEEECCCC----C
Confidence 0111111111 3455 77776633111 1
Q ss_pred CcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 259 VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 259 ~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
....++.+.++++.. ..+++..|.|.+.+++.++..+|||+|.++
T Consensus 133 ~~~~~~~i~~lr~~~--~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 133 SNAVINMIQHIKKHL--PESFVIAGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp SHHHHHHHHHHHHHC--TTSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred cHHHHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEe
Confidence 234678888888887 334445577999999999999999999993
No 149
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.39 E-value=0.0005 Score=62.50 Aligned_cols=68 Identities=25% Similarity=0.310 Sum_probs=53.9
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|.|.+..-.+.. ...... +.+.++++.. ++|+++.|||++++++.+++.+|||.|.+|+..+.
T Consensus 42 ~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 42 QRSGAEWLHLVDLDAAF-GTGDNR-ALIAEVAQAM--DIKVELSGGIRDDDTLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHTTCSEEEEEEHHHHH-TSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHcCCCEEEEecCchhh-cCCChH-HHHHHHHHhc--CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHhh
Confidence 67899999987532211 122345 7788888877 79999999999999999999999999999997653
No 150
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.38 E-value=0.0011 Score=62.56 Aligned_cols=82 Identities=22% Similarity=0.251 Sum_probs=64.8
Q ss_pred HHHHHHHHhcCC-CEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH
Q 017781 215 KDVKWLQTITKL-PILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 289 (366)
Q Consensus 215 ~~i~~lr~~~~~-pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~ 289 (366)
+.++.+|+..+- ++++ .+-+.++ .++|+|+|-++| .+.+.+.++++.+.++++|.++||| +.+
T Consensus 197 ~ai~~~r~~~~~~kI~v-ev~tlee~~eA~~aGaD~I~ld~----------~~~e~l~~~v~~~~~~~~I~ASGGI-t~~ 264 (296)
T 1qap_A 197 QAVEKAFWLHPDVPVEV-EVENLDELDDALKAGADIIMLDN----------FNTDQMREAVKRVNGQARLEVSGNV-TAE 264 (296)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEESS----------CCHHHHHHHHHTTCTTCCEEECCCS-CHH
T ss_pred HHHHHHHHhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEECC----------CCHHHHHHHHHHhCCCCeEEEECCC-CHH
Confidence 458888887643 4444 4556665 889999999977 2446667777777668999999999 999
Q ss_pred HHHHHHHhCcCEEEecHHH
Q 017781 290 DVFKALALGASGIFIGRPV 308 (366)
Q Consensus 290 dv~kalalGAd~V~igr~~ 308 (366)
.+.+..+.|+|.+.+|+..
T Consensus 265 ~i~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 265 TLREFAETGVDFISVGALT 283 (296)
T ss_dssp HHHHHHHTTCSEEECSHHH
T ss_pred HHHHHHHcCCCEEEEeHHH
Confidence 9999999999999999843
No 151
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.38 E-value=0.00084 Score=60.91 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=55.3
Q ss_pred cCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHH
Q 017781 241 AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGV 320 (366)
Q Consensus 241 aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv 320 (366)
.|.+.|.+.. .|.. ...+.+.++++.+. ++||++-|||++++++.+++ .|||.|.+|+++.. .++-+
T Consensus 152 ~g~~~VYld~-sG~~-----~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~-----~p~~~ 218 (228)
T 3vzx_A 152 LQLPIFYLEY-SGVL-----GDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYE-----DFDRA 218 (228)
T ss_dssp TTCSEEEEEC-TTSC-----CCHHHHHHHHHHCS-SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHH-----CHHHH
T ss_pred cCCCEEEecC-CCCc-----CCHHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhc-----CHHHH
Confidence 4567777766 3321 25788888888762 58999999999999999887 79999999999875 34444
Q ss_pred HHHHHHHH
Q 017781 321 RRVLEMLR 328 (366)
Q Consensus 321 ~~~~~~l~ 328 (366)
.++++.++
T Consensus 219 ~~~v~a~~ 226 (228)
T 3vzx_A 219 LKTVAAVK 226 (228)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 44444443
No 152
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.38 E-value=0.00011 Score=66.95 Aligned_cols=68 Identities=18% Similarity=0.170 Sum_probs=52.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|.|.++...+.. ......++.+.+++ .+ .+||++.|||++.+++.+++++|||+|++|+.++.
T Consensus 40 ~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~-~~--~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 107 (241)
T 1qo2_A 40 IEEGFTLIHVVDLSNAI-ENSGENLPVLEKLS-EF--AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLE 107 (241)
T ss_dssp HHTTCCCEEEEEHHHHH-HCCCTTHHHHHHGG-GG--GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHH
T ss_pred HHcCCCEEEEecccccc-cCCchhHHHHHHHH-hc--CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhh
Confidence 56799999987521100 01234577777777 55 79999999999999999999999999999998764
No 153
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.35 E-value=0.00043 Score=67.83 Aligned_cols=94 Identities=20% Similarity=0.308 Sum_probs=65.5
Q ss_pred CCCCCHHHHHHHHHhcCCCEEEEecc-CHHH-----HHcCCcEEEEcCCCccCCCCCc-chHHHHHHHHHHcCCCceEEE
Q 017781 209 DRSLSWKDVKWLQTITKLPILVKGVL-TAED-----VQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 209 d~~~~~~~i~~lr~~~~~pv~vK~v~-~~~d-----~~aGad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~vi~ 281 (366)
++....+.++++++. +.|++++... ...+ .++|+|++.+++....+...++ ..+..+.++++.. ++||++
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~ 216 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIA 216 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEE
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEE
Confidence 333344567888875 8899998753 2332 6789999988643211111122 1556677888877 799999
Q ss_pred ecCCCCHHHHHHHHHhCcCEEEecH
Q 017781 282 DGGVRRGTDVFKALALGASGIFIGR 306 (366)
Q Consensus 282 ~GGI~~~~dv~kalalGAd~V~igr 306 (366)
|||.+++|+.+++.+|||+|.+|+
T Consensus 217 -ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 217 -GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp -ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred -CCcCCHHHHHHHHHcCCCEEEECC
Confidence 999999999999999999999986
No 154
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.34 E-value=0.00013 Score=64.34 Aligned_cols=142 Identities=14% Similarity=0.142 Sum_probs=93.5
Q ss_pred ceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHH
Q 017781 124 IRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAY 203 (366)
Q Consensus 124 ~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (366)
..+|=++ .+-..+.+.+++++++|- -++|++|... |+. .....-.+
T Consensus 31 ~~ifll~--g~i~~l~~~v~~lk~~~K-~v~Vh~Dli~----------Gls---------------------~d~~ai~f 76 (192)
T 3kts_A 31 TYMVMLE--THVAQLKALVKYAQAGGK-KVLLHADLVN----------GLK---------------------NDDYAIDF 76 (192)
T ss_dssp CEEEECS--EETTTHHHHHHHHHHTTC-EEEEEGGGEE----------TCC---------------------CSHHHHHH
T ss_pred CEEEEec--CcHHHHHHHHHHHHHcCC-eEEEecCchh----------ccC---------------------CcHHHHHH
Confidence 4555555 355667888999999985 5556887431 211 00112233
Q ss_pred hhhccCCCC----CHHHHHHHHHhcCCCEEEEecc----CHHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHH
Q 017781 204 VAGQIDRSL----SWKDVKWLQTITKLPILVKGVL----TAED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVV 270 (366)
Q Consensus 204 ~~~~~d~~~----~~~~i~~lr~~~~~pv~vK~v~----~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~ 270 (366)
+.....++. -...++..|+. ++..+-+.-+ +.+. .+...|+|-+-- |+.+ ..+.+++
T Consensus 77 L~~~~~pdGIIsTk~~~i~~Ak~~-gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLP--------Gi~p-~iI~~i~ 146 (192)
T 3kts_A 77 LCTEICPDGIISTRGNAIMKAKQH-KMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLP--------GIIP-EQVQKMT 146 (192)
T ss_dssp HHHTTCCSEEEESCHHHHHHHHHT-TCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEEC--------TTCH-HHHHHHH
T ss_pred HHhCCCCCEEEeCcHHHHHHHHHC-CCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECC--------chhH-HHHHHHH
Confidence 333223322 23457777664 7666666431 2122 667789887531 2222 6888888
Q ss_pred HHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 271 KATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 271 ~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
+.+ ++|||+.|+|++.+|+.+|+..||++|..++..||.
T Consensus 147 ~~~--~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~ 185 (192)
T 3kts_A 147 QKL--HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWE 185 (192)
T ss_dssp HHH--CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGT
T ss_pred Hhc--CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhC
Confidence 888 899999999999999999999999999999999984
No 155
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.32 E-value=0.00022 Score=65.77 Aligned_cols=68 Identities=16% Similarity=0.201 Sum_probs=52.8
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l 309 (366)
.++|+|.|.++.-.+... .....++.+.++++.+ ++||++.|||++..|+.+++.+|||+|.+|+.++
T Consensus 40 ~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 40 EKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp HHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGC--CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred HHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 567999999865221111 1123577888887766 7999999999999999999999999999999776
No 156
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=97.31 E-value=0.012 Score=53.05 Aligned_cols=108 Identities=16% Similarity=0.182 Sum_probs=75.0
Q ss_pred HHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHc---CCCceEEEecCCCCH
Q 017781 216 DVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDGGVRRG 288 (366)
Q Consensus 216 ~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~vi~~GGI~~~ 288 (366)
.++.+.+. ++++-+-.+.+... .++||+.|.. .-||-.|++.+....+.++.+.. +.+..|++.+ +|+.
T Consensus 96 A~~~L~~~-GI~vn~TlifS~~QA~~Aa~AGa~yISP--fvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~IlaAS-~Rn~ 171 (223)
T 3s1x_A 96 AIKTLSSE-HINTNCTLVFNPIQALLAAKAGVTYVSP--FVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVAS-IRNP 171 (223)
T ss_dssp HHHHHHHT-TCCEEEEEECSHHHHHHHHHTTCSEEEE--BSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEEBS-CCSH
T ss_pred HHHHHHHC-CCcEEEEEeCCHHHHHHHHHcCCeEEEe--ecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEEEe-CCCH
Confidence 34555443 89999999999887 8999998754 44554455555566666665543 3355666655 9999
Q ss_pred HHHHHHHHhCcCEEEecHHHHHHhhhcC--HHHHHHHHHHH
Q 017781 289 TDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEML 327 (366)
Q Consensus 289 ~dv~kalalGAd~V~igr~~l~~l~~~G--~~gv~~~~~~l 327 (366)
.++.++..+|||.+-+.-.++..+...- ..|++++.+.|
T Consensus 172 ~~v~~aa~~G~d~~Tip~~vl~~l~~hpltd~~~~~F~~Dw 212 (223)
T 3s1x_A 172 IHVLRSAVIGADVVTVPFNVLKSLMKHPKTDEGLAKFLEDW 212 (223)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 9999999999999999988887764321 24555554444
No 157
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.31 E-value=0.0036 Score=55.91 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=38.2
Q ss_pred HHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 263 IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 263 ~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.+.+.++++..+.++||+++|||+ ++.+.+++.+|||.+.+||++..
T Consensus 150 ~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~~aGad~ivvG~~I~~ 196 (216)
T 1q6o_A 150 EADITAIKRLSDMGFKVTVTGGLA-LEDLPLFKGIPIHVFIAGRSIRD 196 (216)
T ss_dssp HHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTTSCCSEEEESHHHHT
T ss_pred HHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHHHcCCCEEEEeehhcC
Confidence 455666666554478899999998 77788999999999999999864
No 158
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.23 E-value=0.00061 Score=63.60 Aligned_cols=84 Identities=13% Similarity=0.119 Sum_probs=63.2
Q ss_pred HHHHHHHHHhcC--CCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcC---CCceEEEecC
Q 017781 214 WKDVKWLQTITK--LPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGG 284 (366)
Q Consensus 214 ~~~i~~lr~~~~--~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GG 284 (366)
.+.++.+|+..+ .++.+ .+.+.++ .++|+|+|.+++. + .+.+.++++.++ .+++|.++||
T Consensus 169 ~~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~-------~---~~~l~~~v~~l~~~~~~~~i~AsGG 237 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDNL-------S---VLETKEIAAYRDAHYPFVLLEASGN 237 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEETC-------C---HHHHHHHHHHHHHHCTTCEEEEESS
T ss_pred HHHHHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECCC-------C---HHHHHHHHHHhhccCCCcEEEEECC
Confidence 356888888875 35555 6667766 7899999999872 2 244444444442 2599999999
Q ss_pred CCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~~l 309 (366)
| +.+.+.+.++.|||.+.+|+.+.
T Consensus 238 I-~~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 238 I-SLESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp C-CTTTHHHHHTTTCSEEECTHHHH
T ss_pred C-CHHHHHHHHHcCCcEEEEcHHhc
Confidence 9 89999999999999999998754
No 159
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=97.19 E-value=0.014 Score=52.15 Aligned_cols=107 Identities=20% Similarity=0.157 Sum_probs=74.7
Q ss_pred HHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHc---CCCceEEEecCCCCH
Q 017781 216 DVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDGGVRRG 288 (366)
Q Consensus 216 ~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~vi~~GGI~~~ 288 (366)
.++.+.+. ++++-+-.+.+... .++||+.|.. .-||-.|++.+....+.++.+.. +.+..|++.+ +|+.
T Consensus 94 A~~~L~~~-GI~vn~TlifS~~Qa~~Aa~AGa~yISP--fvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ilaAS-~R~~ 169 (212)
T 3r8r_A 94 AVRALTDL-GIKTNVTLIFNANQALLAARAGATYVSP--FLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIAAS-IRHP 169 (212)
T ss_dssp HHHHHHHT-TCCEEEEEECSHHHHHHHHHHTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEEBS-CCSH
T ss_pred HHHHHHHC-CCcEEEEEeCCHHHHHHHHHcCCeEEEe--ccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEEec-CCCH
Confidence 34455443 89999999999887 8999998754 34554556666666666666544 3355666655 9999
Q ss_pred HHHHHHHHhCcCEEEecHHHHHHhhhcC--HHHHHHHHHH
Q 017781 289 TDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEM 326 (366)
Q Consensus 289 ~dv~kalalGAd~V~igr~~l~~l~~~G--~~gv~~~~~~ 326 (366)
.++.++..+|||.+-+.-.++..+...- ..|++.+.+.
T Consensus 170 ~~v~~~a~~G~d~~Tip~~vl~~l~~hpltd~~~~~F~~D 209 (212)
T 3r8r_A 170 QHVTEAALRGAHIGTMPLKVIHALTKHPLTDKGIEQFLAD 209 (212)
T ss_dssp HHHHHHHHTTCSEEEECHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEcCHHHHHHHHcCCcHHHHHHHHHHH
Confidence 9999999999999999988887764321 2445544443
No 160
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=97.17 E-value=0.008 Score=58.64 Aligned_cols=202 Identities=23% Similarity=0.274 Sum_probs=112.1
Q ss_pred CCCCccceeEcCcccC---CceEecccccccccCChhhHHHHHHHHHcCCceec-CCCCCCCHHHHhccCCCceEEEeee
Q 017781 56 VSKIDMNTTVLGFKIS---MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWSTSSVEEVASTGPGIRFFQLYV 131 (366)
Q Consensus 56 ~~~vd~st~l~g~~l~---~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v-s~~~~~~~e~i~~~~~~~~~~Qly~ 131 (366)
...-|+.+++.+..+. .+++++|.+.. ..+.-..++++++++|+.++. .++.+.+ . ++.||
T Consensus 124 ~~~~~t~i~i~~~~iG~~~~~~Iigpcsve---s~e~a~~~a~~~k~aGa~~vk~q~fkprt-------s--~~~f~--- 188 (385)
T 3nvt_A 124 NKKEDTIVTVKGLPIGNGEPVFVFGPCSVE---SYEQVAAVAESIKAKGLKLIRGGAFKPRT-------S--PYDFQ--- 188 (385)
T ss_dssp TCCSCCCEEETTEEETSSSCEEEEECSBCC---CHHHHHHHHHHHHHTTCCEEECBSSCCCS-------S--TTSCC---
T ss_pred cCCCCcEEEECCEEECCCCeEEEEEeCCcC---CHHHHHHHHHHHHHcCCCeEEcccccCCC-------C--hHhhc---
Confidence 4445566666655443 46888888764 233346899999999998875 3343211 1 22233
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
.-..+....+.+.+++.|...+.=-.| + ..-+....+ ++. + .+ +...
T Consensus 189 gl~~egl~~L~~~~~~~Gl~~~te~~d-~----~~~~~l~~~-vd~-l-----------kI---------------gs~~ 235 (385)
T 3nvt_A 189 GLGLEGLKILKRVSDEYGLGVISEIVT-P----ADIEVALDY-VDV-I-----------QI---------------GARN 235 (385)
T ss_dssp CCTHHHHHHHHHHHHHHTCEEEEECCS-G----GGHHHHTTT-CSE-E-----------EE---------------CGGG
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEecCC-H----HHHHHHHhh-CCE-E-----------EE---------------Cccc
Confidence 123455666666777788766532111 1 111111111 110 0 00 0011
Q ss_pred -CCHHHHHHHHHhcCCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCC---CcchHHHHHHHHHHcCCCc
Q 017781 212 -LSWKDVKWLQTITKLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDY---VPATIMALEEVVKATQGRI 277 (366)
Q Consensus 212 -~~~~~i~~lr~~~~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~---~~~~~~~l~~i~~~~~~~i 277 (366)
..+..++.+.+ +++||++|.. .+.++ .+.|.+-|++--.|.+.... ....+..++.+++.. .+
T Consensus 236 ~~n~~LL~~~a~-~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~--~l 312 (385)
T 3nvt_A 236 MQNFELLKAAGR-VDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKET--HL 312 (385)
T ss_dssp TTCHHHHHHHHT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SS
T ss_pred ccCHHHHHHHHc-cCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhc--CC
Confidence 13455666554 6899999965 46666 66787656554434333221 122456677777665 68
Q ss_pred eEEEe----cCCCCH--HHHHHHHHhCcCEEEecHHH
Q 017781 278 PVFLD----GGVRRG--TDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 278 ~vi~~----GGI~~~--~dv~kalalGAd~V~igr~~ 308 (366)
||+.| +|-+.- .-...|+++|||+++|=.-|
T Consensus 313 pV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~ 349 (385)
T 3nvt_A 313 PVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHP 349 (385)
T ss_dssp CEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred CEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecC
Confidence 99887 344333 23456889999999998744
No 161
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.16 E-value=0.001 Score=59.39 Aligned_cols=80 Identities=16% Similarity=0.125 Sum_probs=56.2
Q ss_pred EEeccCHHH---HHcCCcEEEEcCCC--ccCCC-CCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEE
Q 017781 230 VKGVLTAED---VQAGAAGIIVSNHG--ARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 303 (366)
Q Consensus 230 vK~v~~~~d---~~aGad~I~vs~~g--g~~~~-~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ 303 (366)
.-.+.+.++ .+.|+|+|.++.-. ....+ +.+..++.+.++.+.+..++||++.|||. ++++.+++.+||++|.
T Consensus 92 g~s~~t~~e~~~A~~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVa 170 (210)
T 3ceu_A 92 SCSCHSVEEVKNRKHFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAV 170 (210)
T ss_dssp EEEECSHHHHHTTGGGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEE
T ss_pred EEecCCHHHHHHHhhCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEE
Confidence 334567776 23899999976521 11111 12335677777776521279999999997 8999999999999999
Q ss_pred ecHHHHH
Q 017781 304 IGRPVVY 310 (366)
Q Consensus 304 igr~~l~ 310 (366)
+++.+..
T Consensus 171 v~s~i~~ 177 (210)
T 3ceu_A 171 VLGDLWN 177 (210)
T ss_dssp ESHHHHT
T ss_pred EhHHhHc
Confidence 9999854
No 162
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.16 E-value=0.0054 Score=57.28 Aligned_cols=89 Identities=17% Similarity=0.104 Sum_probs=59.0
Q ss_pred CHHHHHHHHHhcCCCEEEEecc-----C-HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHc-----
Q 017781 213 SWKDVKWLQTITKLPILVKGVL-----T-AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT----- 273 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~-----~-~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~----- 273 (366)
..++|+.+++..+ +..+|.++ + .+. .++|||+|.-|...+ .+.++.+.+.-+++.+
T Consensus 137 V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~----~~gAT~edV~lM~~~v~~~~~ 211 (297)
T 4eiv_A 137 IRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQTSSGLG----ATHATMFTVHLISIALREYMV 211 (297)
T ss_dssp HHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCC----CCCCCHHHHHHHHHHHHHHhc
Confidence 3467888888875 67889762 2 331 799999999876422 1223444333333333
Q ss_pred -----------------CCCceEEEe-cCCCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 274 -----------------QGRIPVFLD-GGVRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 274 -----------------~~~i~vi~~-GGI~~~~dv~kalalGAd~V~igr~~l 309 (366)
++++.|=++ ||||+.+|+.+++.+..+ +|..|+
T Consensus 212 ~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~~~~e---lG~~wl 262 (297)
T 4eiv_A 212 RENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADFLMQMIFE---NGPRSI 262 (297)
T ss_dssp C------------------CCEEEEECTTCCHHHHHHHHHHHHHH---HCGGGC
T ss_pred cccccccccccccccccCCceeEEecCCCCCCHHHHHHHHHHHHH---hCcccc
Confidence 457999999 999999999999996555 455544
No 163
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.14 E-value=0.0011 Score=58.82 Aligned_cols=46 Identities=17% Similarity=0.298 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 263 IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 263 ~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
++.+.++.+.. ++|+|+.||+.+++|+.+++..|||+|++|++++.
T Consensus 163 ~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~ 208 (237)
T 3cwo_X 163 TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 208 (237)
T ss_dssp HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHHHHhc--CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHc
Confidence 67777777665 79999999999999999999999999999999865
No 164
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.12 E-value=0.0032 Score=59.08 Aligned_cols=82 Identities=26% Similarity=0.353 Sum_probs=63.0
Q ss_pred HHHHHHHHhcC--CCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 215 KDVKWLQTITK--LPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 215 ~~i~~lr~~~~--~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
+.++.+|+..+ .+|.+ .+.+.++ .++|+|+|.+.|- ..+.++++++.+++++|+.++||| +.
T Consensus 184 ~av~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~~----------~~~~~k~av~~v~~~ipi~AsGGI-t~ 251 (286)
T 1x1o_A 184 EAVRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDNF----------PLEALREAVRRVGGRVPLEASGNM-TL 251 (286)
T ss_dssp HHHHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEESC----------CHHHHHHHHHHHTTSSCEEEESSC-CH
T ss_pred HHHHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCC-CH
Confidence 35788888763 45555 6667776 8899999998773 224455666666557999999999 58
Q ss_pred HHHHHHHHhCcCEEEecHHH
Q 017781 289 TDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 289 ~dv~kalalGAd~V~igr~~ 308 (366)
+.+.+..+.|+|.+.+|+.+
T Consensus 252 eni~~~a~tGvD~IsVgs~~ 271 (286)
T 1x1o_A 252 ERAKAAAEAGVDYVSVGALT 271 (286)
T ss_dssp HHHHHHHHHTCSEEECTHHH
T ss_pred HHHHHHHHcCCCEEEEcHHH
Confidence 99999999999999998754
No 165
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.10 E-value=0.0028 Score=58.01 Aligned_cols=98 Identities=15% Similarity=0.237 Sum_probs=69.1
Q ss_pred CCHHHHHHHHHhcCCCEEEEec-cCHHH----HHcCCcEEEEcCCC--------------ccC-----------------
Q 017781 212 LSWKDVKWLQTITKLPILVKGV-LTAED----VQAGAAGIIVSNHG--------------ARQ----------------- 255 (366)
Q Consensus 212 ~~~~~i~~lr~~~~~pv~vK~v-~~~~d----~~aGad~I~vs~~g--------------g~~----------------- 255 (366)
...+.++.+.+.+.+|+.+-|. -+.++ .++|||-|++...- |.|
T Consensus 62 ~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~ 141 (243)
T 4gj1_A 62 RQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVA 141 (243)
T ss_dssp CCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC
T ss_pred hHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEE
Confidence 3567788888888889888865 46665 78888888774311 000
Q ss_pred -------------------------------C--CC--CcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcC
Q 017781 256 -------------------------------L--DY--VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGAS 300 (366)
Q Consensus 256 -------------------------------~--~~--~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd 300 (366)
. |+ .-+.++.+..+.+.++ ++|||++||+++.+|+.+ +..+++
T Consensus 142 ~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~~l~~~l~~~~~-~ipviasGGv~~~~Dl~~-l~~~~~ 219 (243)
T 4gj1_A 142 VNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIFP-NICIQASGGVASLKDLEN-LKGICS 219 (243)
T ss_dssp --------CCBHHHHHHHHHTTTCCEEEEEETTC-----CCCHHHHHHHHHHCT-TSEEEEESCCCSHHHHHH-TTTTCS
T ss_pred ecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccCCCHHHHHHHHHhcC-CCCEEEEcCCCCHHHHHH-HHccCc
Confidence 0 11 1135667777776652 699999999999999876 566799
Q ss_pred EEEecHHHHHH
Q 017781 301 GIFIGRPVVYS 311 (366)
Q Consensus 301 ~V~igr~~l~~ 311 (366)
+|.+|++|..+
T Consensus 220 gvivg~Al~~g 230 (243)
T 4gj1_A 220 GVIVGKALLDG 230 (243)
T ss_dssp EEEECHHHHTT
T ss_pred hhehHHHHHCC
Confidence 99999998653
No 166
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.07 E-value=0.00098 Score=59.37 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=53.6
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHhCcCEEEecHHHHHHhhhcCH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGIFIGRPVVYSLAAEGE 317 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~-~~dv~kalalGAd~V~igr~~l~~l~~~G~ 317 (366)
.+.|+++++++.+ ..+.+.++++..+.+ +++++|||+. +.++.+++++|||.+.+||+++.+ ..
T Consensus 129 ~~~G~~G~~~~~~----------~~~~i~~lr~~~~~~-~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a---~d- 193 (208)
T 2czd_A 129 NEIEPFGVIAPGT----------RPERIGYIRDRLKEG-IKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA---PN- 193 (208)
T ss_dssp HHHCCSEEECCCS----------STHHHHHHHHHSCTT-CEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS---SS-
T ss_pred HHhCCcEEEECCC----------ChHHHHHHHHhCCCC-eEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC---CC-
Confidence 6779999987653 234456666666433 4679999986 558999999999999999998753 12
Q ss_pred HHHHHHHHHHHHHH
Q 017781 318 KGVRRVLEMLREEF 331 (366)
Q Consensus 318 ~gv~~~~~~l~~el 331 (366)
....++.+++++
T Consensus 194 --p~~~~~~l~~~i 205 (208)
T 2czd_A 194 --PREAAKAIYDEI 205 (208)
T ss_dssp --HHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHH
Confidence 334555565554
No 167
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.05 E-value=0.0075 Score=54.21 Aligned_cols=73 Identities=25% Similarity=0.342 Sum_probs=47.1
Q ss_pred HHcCCcEEEEcCCC--ccC---CCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHG--ARQ---LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~g--g~~---~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.+.|++.|.+.+.- |+. ....+..++...+..+.+..++||++.|||.++.++.++...|||+|.+|++++.+
T Consensus 128 ~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~ 205 (219)
T 2h6r_A 128 AALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKA 205 (219)
T ss_dssp TTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTC
T ss_pred HhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCc
Confidence 55677877765532 211 11112212333333333334799999999999999999999999999999999864
No 168
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.03 E-value=0.004 Score=56.14 Aligned_cols=88 Identities=15% Similarity=0.118 Sum_probs=53.9
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 318 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~ 318 (366)
.+.|+|.+++.-....+.++-..+.+.+..+++..+.+++|.++||| +++++.++..+|||.+.+||++..+ ..+
T Consensus 131 ~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I~~a---~dp- 205 (221)
T 3exr_A 131 LDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGITEA---KNP- 205 (221)
T ss_dssp HHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSC-CGGGGGGGTTCCCSEEEECHHHHTS---SSH-
T ss_pred HcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHHCCCCEEEECchhhCC---CCH-
Confidence 45577777663211111222233344555666655447889999999 5667888888999999999987532 122
Q ss_pred HHHHHHHHHHHHHHH
Q 017781 319 GVRRVLEMLREEFEL 333 (366)
Q Consensus 319 gv~~~~~~l~~el~~ 333 (366)
...++.++++++.
T Consensus 206 --~~a~~~~~~~~~~ 218 (221)
T 3exr_A 206 --AGAARAFKDEIKR 218 (221)
T ss_dssp --HHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHH
Confidence 2345556655543
No 169
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=96.97 E-value=0.0011 Score=62.77 Aligned_cols=82 Identities=18% Similarity=0.218 Sum_probs=61.3
Q ss_pred HHHHHHHHhcC--CCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcC---CCceEEEecCC
Q 017781 215 KDVKWLQTITK--LPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGV 285 (366)
Q Consensus 215 ~~i~~lr~~~~--~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~i~vi~~GGI 285 (366)
+.++.+|+..+ .++++ .+.+.++ .++|+|+|-+++. ++ +.+.++++.++ .+++|.++|||
T Consensus 185 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~-------~~---~~l~~~v~~l~~~~~~~~I~ASGGI 253 (299)
T 2jbm_A 185 KAVRAARQAADFALKVEV-ECSSLQEAVQAAEAGADLVLLDNF-------KP---EELHPTATVLKAQFPSVAVEASGGI 253 (299)
T ss_dssp HHHHHHHHHHTTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC-------CH---HHHHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHHHHHHHhCCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCC-------CH---HHHHHHHHHhhccCCCeeEEEECCC
Confidence 45788888764 45555 6667766 7899999999872 22 44444444442 25899999999
Q ss_pred CCHHHHHHHHHhCcCEEEecHHH
Q 017781 286 RRGTDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 286 ~~~~dv~kalalGAd~V~igr~~ 308 (366)
+.+.+.+..+.|||.+.+|+.+
T Consensus 254 -t~~ni~~~~~aGaD~i~vGs~i 275 (299)
T 2jbm_A 254 -TLDNLPQFCGPHIDVISMGMLT 275 (299)
T ss_dssp -CTTTHHHHCCTTCCEEECTHHH
T ss_pred -CHHHHHHHHHCCCCEEEEChhh
Confidence 8999999999999999999854
No 170
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=96.95 E-value=0.018 Score=54.09 Aligned_cols=175 Identities=11% Similarity=0.056 Sum_probs=105.3
Q ss_pred hHHHHHHHHHcCCceec-CCC------------CCCCHHHHh-------ccCCCceEEEe---eecCCHHHHHHHHHHHH
Q 017781 90 EYATARAASAAGTIMTL-SSW------------STSSVEEVA-------STGPGIRFFQL---YVYKDRNVVAQLVRRAE 146 (366)
Q Consensus 90 e~~la~aa~~~G~~~~v-s~~------------~~~~~e~i~-------~~~~~~~~~Ql---y~~~d~~~~~~~l~ra~ 146 (366)
+...|+.+.+.|+..+. |.. ...+++++. +..+.|....+ | +.+++...+.+++..
T Consensus 26 D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gy-g~~~~~~~~~v~~l~ 104 (295)
T 1xg4_A 26 NANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGF-GSSAFNVARTVKSMI 104 (295)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCS-SSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCccc-CCCHHHHHHHHHHHH
Confidence 66789999999988764 221 113555543 33345666666 4 236777888888888
Q ss_pred HcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhc-C
Q 017781 147 RAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTIT-K 225 (366)
Q Consensus 147 ~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~-~ 225 (366)
++|+.++.|.=.+ .|+++. ++.+- .+ .+.....+.|+.+++.. +
T Consensus 105 ~aGa~gv~iEd~~---------------~~k~cg--H~~gk---------------~L---~p~~~~~~~I~Aa~~a~~~ 149 (295)
T 1xg4_A 105 KAGAAGLHIEDQV---------------GAKRSG--HRPNK---------------AI---VSKEEMVDRIRAAVDAKTD 149 (295)
T ss_dssp HHTCSEEEEECBC---------------SSCCCT--TSSSC---------------CB---CCHHHHHHHHHHHHHHCSS
T ss_pred HcCCeEEEECCCC---------------CCcccC--CCCCC---------------cc---CCHHHHHHHHHHHHHhccC
Confidence 9999998774221 122111 00000 00 00011123455555554 4
Q ss_pred CCEEEEeccC--H----HH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCC--CCHH
Q 017781 226 LPILVKGVLT--A----ED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV--RRGT 289 (366)
Q Consensus 226 ~pv~vK~v~~--~----~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI--~~~~ 289 (366)
.++.|..... . ++ .++|||.|.+-+ +++.+.+.++.+.+ ++|++++.-. .++.
T Consensus 150 ~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~---------~~~~~~~~~i~~~~--~iP~~~N~~~~g~~p~ 218 (295)
T 1xg4_A 150 PDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEA---------ITELAMYRQFADAV--QVPILANITEFGATPL 218 (295)
T ss_dssp TTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEETT---------CCSHHHHHHHHHHH--CSCBEEECCSSSSSCC
T ss_pred CCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeC---------CCCHHHHHHHHHHc--CCCEEEEecccCCCCC
Confidence 5677776532 2 33 999999998843 35678888999888 7899876532 2333
Q ss_pred HHHHHH-HhCcCEEEecHHHHHH
Q 017781 290 DVFKAL-ALGASGIFIGRPVVYS 311 (366)
Q Consensus 290 dv~kal-alGAd~V~igr~~l~~ 311 (366)
.-.+-| ++|.+.|.+|...+.+
T Consensus 219 ~~~~eL~~~G~~~v~~~~~~~~a 241 (295)
T 1xg4_A 219 FTTDELRSAHVAMALYPLSAFRA 241 (295)
T ss_dssp CCHHHHHHTTCSEEEESSHHHHH
T ss_pred CCHHHHHHcCCCEEEEChHHHHH
Confidence 333444 5899999999987765
No 171
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.91 E-value=0.011 Score=53.48 Aligned_cols=109 Identities=13% Similarity=0.160 Sum_probs=70.4
Q ss_pred HHHH---HHHHhcCCCEEEEec-cCHHH-----HHcC-CcEEEEcC-CCc-cCCCCCcchHHHHHHHHHHcCCCceEEEe
Q 017781 215 KDVK---WLQTITKLPILVKGV-LTAED-----VQAG-AAGIIVSN-HGA-RQLDYVPATIMALEEVVKATQGRIPVFLD 282 (366)
Q Consensus 215 ~~i~---~lr~~~~~pv~vK~v-~~~~d-----~~aG-ad~I~vs~-~gg-~~~~~~~~~~~~l~~i~~~~~~~i~vi~~ 282 (366)
+.++ .+|+. +..+.+-.- .++.+ .+.| +|.|.+-. +.| ......+..++-+.++++..+ +++|.++
T Consensus 102 ~~i~~~~~i~~~-G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~-~~~I~Vd 179 (227)
T 1tqx_A 102 RCIQLAKEIRDN-NLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYK-NLNIQVD 179 (227)
T ss_dssp HHHHHHHHHHTT-TCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TCEEEEE
T ss_pred HHHHHHHHHHHc-CCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhcc-CCeEEEE
Confidence 4567 77774 544444332 23222 4555 99996532 222 122346677888888888764 7899999
Q ss_pred cCCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHHH
Q 017781 283 GGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 332 (366)
Q Consensus 283 GGI~~~~dv~kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el~ 332 (366)
|||. .+.+.++.++|||.+.+||.+..+ .. ....++.+++.++
T Consensus 180 GGI~-~~ti~~~~~aGAd~~V~GsaIf~~---~d---~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 180 GGLN-IETTEISASHGANIIVAGTSIFNA---ED---PKYVIDTMRVSVQ 222 (227)
T ss_dssp SSCC-HHHHHHHHHHTCCEEEESHHHHTC---SS---HHHHHHHHHHHHH
T ss_pred CCCC-HHHHHHHHHcCCCEEEEeHHHhCC---CC---HHHHHHHHHHHHH
Confidence 9997 788999999999999999987532 12 3344555555443
No 172
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=96.81 E-value=0.032 Score=54.12 Aligned_cols=117 Identities=18% Similarity=0.116 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+.+.+.+.++++.+.|++++-+.+.+ + ...
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~-----~--------------------------------------------~~~ 176 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR-----G--------------------------------------------EKL 176 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS-----C--------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC-----C--------------------------------------------HHH
Confidence 567777888888889999999886542 0 012
Q ss_pred CHHHHHHHHHhc-CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 213 SWKDVKWLQTIT-KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 213 ~~~~i~~lr~~~-~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
..+.++.+|+.+ +.||.++.- .+.++ .+.|+++|- +. ..+..++.+.++++.+ ++||++
T Consensus 177 ~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~iPI~~ 246 (384)
T 2pgw_A 177 DLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFIE-------QP-TVSWSIPAMAHVREKV--GIPIVA 246 (384)
T ss_dssp HHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEe-------CC-CChhhHHHHHHHHhhC--CCCEEE
Confidence 345677777776 466776632 34444 567888875 11 1234678888888887 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecHHH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGRPV 308 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr~~ 308 (366)
++.+.+..|+.+++..| +|.|++....
T Consensus 247 de~i~~~~~~~~~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 247 DQAAFTLYDVYEICRQRAADMICIGPRE 274 (384)
T ss_dssp STTCCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred eCCcCCHHHHHHHHHcCCCCEEEEcchh
Confidence 99999999999999987 8999997643
No 173
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.81 E-value=0.0071 Score=55.15 Aligned_cols=68 Identities=9% Similarity=-0.072 Sum_probs=49.0
Q ss_pred HcCCcEEEE-cCCC--ccCCCCCcchHHHHHHHHHHcCC---CceEEEecCCCCHHHHHHHHH--hCcCEEEecHHHH
Q 017781 240 QAGAAGIIV-SNHG--ARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALA--LGASGIFIGRPVV 309 (366)
Q Consensus 240 ~aGad~I~v-s~~g--g~~~~~~~~~~~~l~~i~~~~~~---~i~vi~~GGI~~~~dv~kala--lGAd~V~igr~~l 309 (366)
..++|.|.+ +-+. |.| ...+..++.+.++++.... +++|.++|||. .+.+.++.. +|||.+.+|+.++
T Consensus 146 l~~~D~vlvMsv~pgfggq-~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf 221 (237)
T 3cu2_A 146 LDQIDVIQLLTLDPRNGTK-YPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALF 221 (237)
T ss_dssp TTTCSEEEEESEETTTTEE-CCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGG
T ss_pred hhcCceeeeeeeccCcCCe-ecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHh
Confidence 347998865 2222 222 1244456777777776532 58999999996 788999999 9999999999875
No 174
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=96.81 E-value=0.0047 Score=57.77 Aligned_cols=82 Identities=16% Similarity=0.246 Sum_probs=63.7
Q ss_pred HHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH
Q 017781 215 KDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 289 (366)
Q Consensus 215 ~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~ 289 (366)
+.++.+|+.. ..|+.| .+-+.++ .++|+|.|-+.|. +.+.+.++++.+++++++.++||| +.+
T Consensus 187 ~Av~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn~----------~~~~l~~av~~~~~~v~ieaSGGI-t~~ 254 (287)
T 3tqv_A 187 KAVTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDNF----------SGEDIDIAVSIARGKVALEVSGNI-DRN 254 (287)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTTCEEEEESSC-CTT
T ss_pred HHHHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHhhcCCceEEEECCC-CHH
Confidence 3477777754 467666 6777766 8899999999882 335677777777678999999999 677
Q ss_pred HHHHHHHhCcCEEEecHHH
Q 017781 290 DVFKALALGASGIFIGRPV 308 (366)
Q Consensus 290 dv~kalalGAd~V~igr~~ 308 (366)
.+.+....|+|.+.+|...
T Consensus 255 ~i~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 255 SIVAIAKTGVDFISVGAIT 273 (287)
T ss_dssp THHHHHTTTCSEEECSHHH
T ss_pred HHHHHHHcCCCEEEEChhh
Confidence 8888888999999999754
No 175
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=96.76 E-value=0.015 Score=54.31 Aligned_cols=62 Identities=18% Similarity=0.332 Sum_probs=45.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHH-hCcCEEEec
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIG 305 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kala-lGAd~V~ig 305 (366)
.+.|+|.|-.|+. .......++.|.++.+..+++++|++.|||+ .+.+.+.++ +|++.+-..
T Consensus 176 i~lGvdrILTSG~----~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~-~~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 176 LTLGFERVLTSGC----DSSALEGLPLIKRLIEQAKGRIVVMPGGGIT-DRNLQRILEGSGATEFHCS 238 (287)
T ss_dssp HHHTCSEEEECTT----SSSTTTTHHHHHHHHHHHTTSSEEEECTTCC-TTTHHHHHHHHCCSEEEEC
T ss_pred HHcCCCEEECCCC----CCChHHhHHHHHHHHHHhCCCCEEEECCCcC-HHHHHHHHHhhCCCEEeEC
Confidence 6679999977652 2223456677777777666689999999995 566776666 899988765
No 176
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.76 E-value=0.032 Score=49.60 Aligned_cols=88 Identities=13% Similarity=0.126 Sum_probs=58.0
Q ss_pred HHHHHHHHhcCCCEEE--E-e-----c---cCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 215 KDVKWLQTITKLPILV--K-G-----V---LTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~v--K-~-----v---~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
+.++.+|+.+++|++- | . . .+.++ .++|+|.|.++..-.... .....+.+..+++.++ .+++
T Consensus 46 ~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p--~~~~~~~i~~~~~~~~-~~~v 122 (223)
T 1y0e_A 46 EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRP--KETLDELVSYIRTHAP-NVEI 122 (223)
T ss_dssp HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCS--SSCHHHHHHHHHHHCT-TSEE
T ss_pred HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCc--ccCHHHHHHHHHHhCC-CceE
Confidence 4577788888888742 1 1 0 12222 789999998864321100 0134567777877763 5666
Q ss_pred EEecCCCCHHHHHHHHHhCcCEEEecHH
Q 017781 280 FLDGGVRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalGAd~V~igr~ 307 (366)
+. ++.+.+++.++..+|+|.++++.+
T Consensus 123 ~~--~~~t~~e~~~~~~~G~d~i~~~~~ 148 (223)
T 1y0e_A 123 MA--DIATVEEAKNAARLGFDYIGTTLH 148 (223)
T ss_dssp EE--ECSSHHHHHHHHHTTCSEEECTTT
T ss_pred Ee--cCCCHHHHHHHHHcCCCEEEeCCC
Confidence 55 578999999999999999988754
No 177
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=96.75 E-value=0.004 Score=56.69 Aligned_cols=60 Identities=18% Similarity=0.225 Sum_probs=48.5
Q ss_pred cEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 244 AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 244 d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
..|.+.. .|. ....+.+.++++.+. ++|+++-|||++++++.+++. |||.|.+|+++...
T Consensus 165 ~~Vyl~~-~G~-----~~~~~~i~~i~~~~~-~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGSa~v~~ 224 (234)
T 2f6u_A 165 PIIYIEY-SGT-----YGNPELVAEVKKVLD-KARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEK 224 (234)
T ss_dssp SEEEEEC-TTS-----CCCHHHHHHHHHHCS-SSEEEEESCCCSHHHHHHHHH-HSSEEEECHHHHHH
T ss_pred CEEEEeC-CCC-----cchHHHHHHHHHhCC-CCCEEEEecCCCHHHHHHHHh-CCCEEEEChHHHhC
Confidence 6666555 232 346788888888752 689999999999999999999 99999999998754
No 178
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=96.74 E-value=0.012 Score=56.99 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 213 (366)
+.+.+.+.++++.+.|++++-+.+.++ +....
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~~ 177 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP------------------------------------------------DLKED 177 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS------------------------------------------------SHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC------------------------------------------------CHHHH
Confidence 677777888888889999988766431 01123
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.++.+|+.+ +.+|.++.- .+.++ .+.|+++|- +. ..+..++.+.++++.+ ++||++
T Consensus 178 ~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPI~~ 247 (371)
T 2ovl_A 178 VDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWIE-------EP-TIPDDLVGNARIVRES--GHTIAG 247 (371)
T ss_dssp HHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHH--CSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhhC--CCCEEe
Confidence 45678888876 578888843 35554 667888774 11 1234678888888887 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++.+.+..|+.+++..| +|.|++..
T Consensus 248 dE~~~~~~~~~~~i~~~~~d~v~ik~ 273 (371)
T 2ovl_A 248 GENLHTLYDFHNAVRAGSLTLPEPDV 273 (371)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEECCCT
T ss_pred CCCCCCHHHHHHHHHcCCCCEEeeCc
Confidence 99999999999999987 89999964
No 179
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.71 E-value=0.0013 Score=62.05 Aligned_cols=82 Identities=17% Similarity=0.168 Sum_probs=48.7
Q ss_pred HHHHHHHHhcC--CCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCC------ceEEEe
Q 017781 215 KDVKWLQTITK--LPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR------IPVFLD 282 (366)
Q Consensus 215 ~~i~~lr~~~~--~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~------i~vi~~ 282 (366)
+.++.+|+..+ .++++ .+.+.++ .++|+|+|-+++.+ .+.+.++++.+++. ++|.++
T Consensus 187 ~ai~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~g~~~v~I~AS 255 (294)
T 3c2e_A 187 NAVKNARAVCGFAVKIEV-ECLSEDEATEAIEAGADVIMLDNFK----------GDGLKMCAQSLKNKWNGKKHFLLECS 255 (294)
T ss_dssp HHHHHHHHHHCTTSCEEE-ECSSSHHHHHHHHHTCSEEECCC-------------------------------CCEEEEE
T ss_pred HHHHHHHHhcCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhcccccCCCCeEEEEE
Confidence 45788888764 45555 5666655 88999999987721 23444544444333 899999
Q ss_pred cCCCCHHHHHHHHHhCcCEEEecHHH
Q 017781 283 GGVRRGTDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 283 GGI~~~~dv~kalalGAd~V~igr~~ 308 (366)
||| +.+.+.+..+.|||.+.+|+.+
T Consensus 256 GGI-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 256 GGL-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp CCC-CC------CCCSCSEEECGGGT
T ss_pred CCC-CHHHHHHHHHcCCCEEEEechh
Confidence 999 8999999999999999999864
No 180
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.69 E-value=0.031 Score=50.55 Aligned_cols=83 Identities=16% Similarity=0.103 Sum_probs=55.4
Q ss_pred CHHHHHHHHHhcCCCEE--EEe-------c--cCHHH----HHcCCcEEEEcCCCccCCCCCcch-HHHHHHHHHHcCCC
Q 017781 213 SWKDVKWLQTITKLPIL--VKG-------V--LTAED----VQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGR 276 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~--vK~-------v--~~~~d----~~aGad~I~vs~~gg~~~~~~~~~-~~~l~~i~~~~~~~ 276 (366)
+.++++++|+.+++||+ .|- . .+.++ .++|+|.|.+...... .|.. .+.+..+.+ . .
T Consensus 57 ~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~----~p~~l~~~i~~~~~-~--g 129 (229)
T 3q58_A 57 GIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRS----RPVDIDSLLTRIRL-H--G 129 (229)
T ss_dssp SHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--T
T ss_pred CHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccC----ChHHHHHHHHHHHH-C--C
Confidence 35678999999999987 231 1 23333 8999999987543211 1222 234444433 2 4
Q ss_pred ceEEEecCCCCHHHHHHHHHhCcCEEEe
Q 017781 277 IPVFLDGGVRRGTDVFKALALGASGIFI 304 (366)
Q Consensus 277 i~vi~~GGI~~~~dv~kalalGAd~V~i 304 (366)
+++++ .+.+.+++.++..+|||.|.+
T Consensus 130 ~~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 130 LLAMA--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp CEEEE--ECSSHHHHHHHHHTTCSEEEC
T ss_pred CEEEE--ecCCHHHHHHHHhCCCCEEEe
Confidence 66665 589999999999999999975
No 181
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.68 E-value=0.027 Score=53.14 Aligned_cols=65 Identities=29% Similarity=0.261 Sum_probs=46.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHH----cCCCce-EEEecCCCCHH----HHHHHHHhCcCEEEecHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA----TQGRIP-VFLDGGVRRGT----DVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~----~~~~i~-vi~~GGI~~~~----dv~kalalGAd~V~igr~~l 309 (366)
.+.|+|.+.+.-.. + +...++.+.++.+. + .+| |++.||+ +.+ .+..++..||++|.+||.+.
T Consensus 187 ~~lGaD~iKv~~~~----~-~~g~~~~~~~vv~~~~~~~--~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~ 258 (304)
T 1to3_A 187 GDSGADLYKVEMPL----Y-GKGARSDLLTASQRLNGHI--NMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGRAVW 258 (304)
T ss_dssp TTSSCSEEEECCGG----G-GCSCHHHHHHHHHHHHHTC--CSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESHHHH
T ss_pred HHcCCCEEEeCCCc----C-CCCCHHHHHHHHHhccccC--CCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEehHHh
Confidence 67899999874310 0 01145556666655 4 789 9999999 553 47778889999999999986
Q ss_pred HH
Q 017781 310 YS 311 (366)
Q Consensus 310 ~~ 311 (366)
..
T Consensus 259 q~ 260 (304)
T 1to3_A 259 SS 260 (304)
T ss_dssp GG
T ss_pred Cc
Confidence 54
No 182
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.66 E-value=0.03 Score=52.00 Aligned_cols=84 Identities=14% Similarity=0.242 Sum_probs=59.3
Q ss_pred HHHHHHHHHhcCCCEEEEec-cCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 214 WKDVKWLQTITKLPILVKGV-LTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~vK~v-~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
.++++.+|+.+++||+.|.. .+... .++|||+|.+...- ..+..+..+.+..+.+ .+.++++ +++.
T Consensus 102 ~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~-----l~~~~l~~l~~~a~~l--Gl~~lve--v~t~ 172 (272)
T 3qja_A 102 LDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAA-----LEQSVLVSMLDRTESL--GMTALVE--VHTE 172 (272)
T ss_dssp HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGG-----SCHHHHHHHHHHHHHT--TCEEEEE--ESSH
T ss_pred HHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEeccc-----CCHHHHHHHHHHHHHC--CCcEEEE--cCCH
Confidence 46889999999999999964 45432 88999999873211 1122333333333444 5666653 7899
Q ss_pred HHHHHHHHhCcCEEEecH
Q 017781 289 TDVFKALALGASGIFIGR 306 (366)
Q Consensus 289 ~dv~kalalGAd~V~igr 306 (366)
+++.+|+.+|||.++++.
T Consensus 173 ee~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 173 QEADRALKAGAKVIGVNA 190 (272)
T ss_dssp HHHHHHHHHTCSEEEEES
T ss_pred HHHHHHHHCCCCEEEECC
Confidence 999999999999999984
No 183
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.65 E-value=0.039 Score=49.95 Aligned_cols=82 Identities=23% Similarity=0.285 Sum_probs=54.8
Q ss_pred HHHHHHHHHhcCCCEEE--Ee------c---cCHHH----HHcCCcEEEEcCCCccCCCCCcchH-HHHHHHHHHcCCCc
Q 017781 214 WKDVKWLQTITKLPILV--KG------V---LTAED----VQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRI 277 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~v--K~------v---~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~i 277 (366)
.+.|+++|+.+++||+- |- + .+.++ .++|+|.|.+...... .|..+ +.+..+.+ . .+
T Consensus 58 ~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~----~p~~l~~~i~~~~~-~--g~ 130 (232)
T 3igs_A 58 IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQ----RPVAVEALLARIHH-H--HL 130 (232)
T ss_dssp HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TC
T ss_pred HHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccC----CHHHHHHHHHHHHH-C--CC
Confidence 46789999999999862 31 1 23333 8999999987553211 12222 34444433 2 46
Q ss_pred eEEEecCCCCHHHHHHHHHhCcCEEEe
Q 017781 278 PVFLDGGVRRGTDVFKALALGASGIFI 304 (366)
Q Consensus 278 ~vi~~GGI~~~~dv~kalalGAd~V~i 304 (366)
++++ .+.+.+++.++..+|||.|.+
T Consensus 131 ~v~~--~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 131 LTMA--DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp EEEE--ECCSHHHHHHHHHTTCSEEEC
T ss_pred EEEE--eCCCHHHHHHHHhCCCCEEEE
Confidence 6665 589999999999999999975
No 184
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=96.64 E-value=0.0023 Score=57.53 Aligned_cols=79 Identities=22% Similarity=0.222 Sum_probs=55.6
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHhCcCEEEecHHHHHHhhhcCH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGIFIGRPVVYSLAAEGE 317 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~-~~dv~kalalGAd~V~igr~~l~~l~~~G~ 317 (366)
.++|+|++++|.+ ..+.+..+++.++ + .+++++||+- +.+..+++..|||.+.+||+++.+ ..+
T Consensus 125 ~~~G~~GvV~sat----------~~~e~~~ir~~~~-~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a---~dp 189 (215)
T 3ve9_A 125 RRVNPKGFVAPAT----------RPSMISRVKGDFP-D-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQS---ADP 189 (215)
T ss_dssp HHHCCSEEECCTT----------SHHHHHHHHHHCT-T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTS---SSH
T ss_pred HHcCCCceeeCCC----------CHHHHHHHHHhCC-C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCC---CCH
Confidence 6789999987552 2345667777775 4 6889999984 336778889999999999999754 122
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 017781 318 KGVRRVLEMLREEFELAM 335 (366)
Q Consensus 318 ~gv~~~~~~l~~el~~~m 335 (366)
...++.++++++...
T Consensus 190 ---~~a~~~i~~~i~~~~ 204 (215)
T 3ve9_A 190 ---VRKLEEIVRSQEEVL 204 (215)
T ss_dssp ---HHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHHH
Confidence 234556666666544
No 185
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=96.63 E-value=0.01 Score=57.01 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+.+.+.+.++++.+.|++++-++++++ +...
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~ 174 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYP------------------------------------------------ALDQ 174 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCS------------------------------------------------SHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC------------------------------------------------CHHH
Confidence 4566677777888889999998866431 0112
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +.||.++.- .+.++ .+.|+++|- +. ..+..++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~--~iPI~ 244 (359)
T 1mdl_A 175 DLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIE-------EP-TLQHDYEGHQRIQSKL--NVPVQ 244 (359)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCEE-------CC-SCTTCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeEE-------CC-CChhhHHHHHHHHHhC--CCCEE
Confidence 346678888876 577888743 34444 667888773 11 1234678888888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++.+.+..|+.+++..| +|.|++..
T Consensus 245 ~de~~~~~~~~~~~i~~~~~d~v~ik~ 271 (359)
T 1mdl_A 245 MGENWLGPEEMFKALSIGACRLAMPDA 271 (359)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEeecc
Confidence 999999999999999987 89999964
No 186
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=96.62 E-value=0.011 Score=56.10 Aligned_cols=81 Identities=21% Similarity=0.303 Sum_probs=62.7
Q ss_pred HHHHHHHHhcC-CCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH
Q 017781 215 KDVKWLQTITK-LPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 289 (366)
Q Consensus 215 ~~i~~lr~~~~-~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~ 289 (366)
+.++.+|+..+ .|+.| .+-+.++ .++|+|+|-+.|. +.+.+.++++.++++++|.++||| +.+
T Consensus 220 ~Av~~ar~~~p~~kIeV-EVdtldea~eAl~aGaD~I~LDn~----------~~~~l~~av~~l~~~v~ieaSGGI-t~~ 287 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEV-ETETLAELEEAISAGADIIMLDNF----------SLEMMREAVKINAGRAALENSGNI-TLD 287 (320)
T ss_dssp HHHHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSC-CHH
T ss_pred HHHHHHHHhCCCCeEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEECCC-CHH
Confidence 45778887763 45555 6677766 7899999999882 346677777777678999999999 577
Q ss_pred HHHHHHHhCcCEEEecHH
Q 017781 290 DVFKALALGASGIFIGRP 307 (366)
Q Consensus 290 dv~kalalGAd~V~igr~ 307 (366)
.+.+..+.|+|.+.+|..
T Consensus 288 ~I~~~a~tGVD~isvGal 305 (320)
T 3paj_A 288 NLKECAETGVDYISVGAL 305 (320)
T ss_dssp HHHHHHTTTCSEEECTHH
T ss_pred HHHHHHHcCCCEEEECce
Confidence 777777799999999974
No 187
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=96.53 E-value=0.0032 Score=57.52 Aligned_cols=50 Identities=18% Similarity=0.261 Sum_probs=42.8
Q ss_pred cchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 260 PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 260 ~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
....+.+.++++.+. ++||++-|||++++++.+++. |||+|.+|+++...
T Consensus 167 ~~~~~~i~~i~~~~~-~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGSa~v~~ 216 (240)
T 1viz_A 167 LGDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYAE-HADVIVVGNAVYED 216 (240)
T ss_dssp CCCHHHHHHHHHTCS-SSEEEEESSCCSHHHHHHHHT-TCSEEEECTHHHHC
T ss_pred cChHHHHHHHHHhcC-CCCEEEEeccCCHHHHHHHHh-CCCEEEEChHHHhC
Confidence 346778888887652 689999999999999999888 99999999998753
No 188
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.48 E-value=0.0023 Score=58.59 Aligned_cols=67 Identities=21% Similarity=0.313 Sum_probs=52.9
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~ 308 (366)
.+.|+|.+++-.-.+. ..+.+...+.+.++.+.+ .+|+.+.||||+-+|+.+.|.+|||-|.+++..
T Consensus 41 ~~~gad~lhvvDld~a-~~~~~~~~~~i~~i~~~~--~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a 107 (243)
T 4gj1_A 41 EKAGAKELHLVDLTGA-KDPSKRQFALIEKLAKEV--SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMA 107 (243)
T ss_dssp HHHTCCEEEEEEHHHH-HCGGGCCHHHHHHHHHHC--CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTT
T ss_pred HHCCCCEEEEEecCcc-cccchhHHHHHHHHHHhc--CCCeEeccccccHHHHHHHHHcCCCEEEEcccc
Confidence 5678998876431110 112345678888998887 799999999999999999999999999999854
No 189
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.46 E-value=0.012 Score=56.91 Aligned_cols=84 Identities=21% Similarity=0.258 Sum_probs=62.8
Q ss_pred HHHHHHHHhcCCCEEEEeccCHHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH
Q 017781 215 KDVKWLQTITKLPILVKGVLTAED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 289 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~vK~v~~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~ 289 (366)
+.++++|+..++|+.+-...+..+ .++|+|.|++....|. .....+.+.++++.+ ++||++ |.+.+.+
T Consensus 85 ~~I~~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~----~~~~~~~i~~i~~~~--~~~Viv-g~v~t~e 157 (361)
T 3khj_A 85 NEVLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEE 157 (361)
T ss_dssp HHHHHHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCS----BHHHHHHHHHHHHHC--CCEEEE-EEECSHH
T ss_pred HHHHHHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCC----cHHHHHHHHHHHHhc--CCcEEE-ccCCCHH
Confidence 467788877778988886543222 8999999988543221 122346777777776 788887 6789999
Q ss_pred HHHHHHHhCcCEEEec
Q 017781 290 DVFKALALGASGIFIG 305 (366)
Q Consensus 290 dv~kalalGAd~V~ig 305 (366)
++.+++.+|||+|.+|
T Consensus 158 ~A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 158 ATKELIENGADGIKVG 173 (361)
T ss_dssp HHHHHHHTTCSEEEEC
T ss_pred HHHHHHHcCcCEEEEe
Confidence 9999999999999985
No 190
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.45 E-value=0.03 Score=53.40 Aligned_cols=100 Identities=21% Similarity=0.254 Sum_probs=57.3
Q ss_pred HHcCCcEEEEcCCCccC----C---CCCcc---hHHHHHHHHHHcCCCceEE-EecCCCCHHHHHHH----HHhCc--CE
Q 017781 239 VQAGAAGIIVSNHGARQ----L---DYVPA---TIMALEEVVKATQGRIPVF-LDGGVRRGTDVFKA----LALGA--SG 301 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~----~---~~~~~---~~~~l~~i~~~~~~~i~vi-~~GGI~~~~dv~ka----lalGA--d~ 301 (366)
.+.|+|.+.+--.|-.. . ....+ ..+...++.+.. .+|+| .+||. +.+++.+. +..|| .+
T Consensus 200 ~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~--~~P~v~lsgG~-~~~~fl~~v~~A~~aGa~f~G 276 (332)
T 3iv3_A 200 ERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST--DLPYIYLSAGV-SAELFQETLVFAHKAGAKFNG 276 (332)
T ss_dssp GGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC--SSCEEEECTTC-CHHHHHHHHHHHHHHTCCCCE
T ss_pred cCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC--CCCEEEECCCC-CHHHHHHHHHHHHHcCCCcce
Confidence 46799999985322100 0 01112 223455555554 79965 79998 56666654 45799 99
Q ss_pred EEecHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCChhhhcc
Q 017781 302 IFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 348 (366)
Q Consensus 302 V~igr~~l~~l~~~G~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~ 348 (366)
|.+||.+-.. +|..+.+.=.+..+.+|+-.|..++++|+.
T Consensus 277 v~~GRnvwq~-------~v~~~~~~~~~~~~~~l~~~g~~~i~~l~~ 316 (332)
T 3iv3_A 277 VLCGRATWAG-------SVQVYMEEGKEAARQWLRTSGLQNINELNK 316 (332)
T ss_dssp EEECHHHHTT-------HHHHHHHHCHHHHHHHHTTHHHHHHHHHHH
T ss_pred EEeeHHHHHh-------hhhhhccccHHHHHHHHHHHhHHHHHHHHH
Confidence 9999987432 222233322344555666666666666653
No 191
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.44 E-value=0.11 Score=49.75 Aligned_cols=230 Identities=15% Similarity=0.176 Sum_probs=120.7
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCceec-CCCCCCCHHHH-hc-c--CCC----ceEEEeee--cCCHHHHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWSTSSVEEV-AS-T--GPG----IRFFQLYV--YKDRNVVAQ 140 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v-s~~~~~~~e~i-~~-~--~~~----~~~~Qly~--~~d~~~~~~ 140 (366)
.|++||-++.......+--..++++|+++|+-.+= .++ ..+.+ .. . ... ...+.+|. .-..+....
T Consensus 19 ~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~---k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~ 95 (349)
T 2wqp_A 19 EPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTH---IVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIK 95 (349)
T ss_dssp CCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEEC---CHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHH
T ss_pred ceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeec---ccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHH
Confidence 58999988653322223345899999999998763 222 23333 11 1 100 00001111 235677788
Q ss_pred HHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC-CHHHHHH
Q 017781 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL-SWKDVKW 219 (366)
Q Consensus 141 ~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~i~~ 219 (366)
+.+.+++.|...+--=.| .+.-|....+.+|. +. + ...+. .+..++.
T Consensus 96 L~~~~~~~Gi~~~st~~d-----~~svd~l~~~~v~~-~K-----------I---------------~S~~~~n~~LL~~ 143 (349)
T 2wqp_A 96 LKEYVESKGMIFISTLFS-----RAAALRLQRMDIPA-YK-----------I---------------GSGECNNYPLIKL 143 (349)
T ss_dssp HHHHHHHTTCEEEEEECS-----HHHHHHHHHHTCSC-EE-----------E---------------CGGGTTCHHHHHH
T ss_pred HHHHHHHhCCeEEEeeCC-----HHHHHHHHhcCCCE-EE-----------E---------------CcccccCHHHHHH
Confidence 888899999776542222 12223322232221 00 0 01122 4566777
Q ss_pred HHHhcCCCEEEEec-cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHH
Q 017781 220 LQTITKLPILVKGV-LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 290 (366)
Q Consensus 220 lr~~~~~pv~vK~v-~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~d 290 (366)
+-+ +++||++|.. .+.++ .+.|.+.+.+.....+.-......+.+++.+++..+ .+||..++==.-..-
T Consensus 144 va~-~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~-~lpVg~sdHt~G~~~ 221 (349)
T 2wqp_A 144 VAS-FGKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFP-DAIIGLSDHTLDNYA 221 (349)
T ss_dssp HHT-TCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCT-TSEEEEECCSSSSHH
T ss_pred HHh-cCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCC-CCCEEeCCCCCcHHH
Confidence 766 5899999955 46666 667887777643222111111124566777766542 478876652222444
Q ss_pred HHHHHHhCcCEEEecHHHHHHhhhcCHHHH----HHHHHHHHHHHHHHHHHcCC
Q 017781 291 VFKALALGASGIFIGRPVVYSLAAEGEKGV----RRVLEMLREEFELAMALSGC 340 (366)
Q Consensus 291 v~kalalGAd~V~igr~~l~~l~~~G~~gv----~~~~~~l~~el~~~m~~~G~ 340 (366)
...|+++||+ +|=+-|--.-+..|.++- -+-+..|.++++..-..+|.
T Consensus 222 ~~AAvAlGA~--iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~ 273 (349)
T 2wqp_A 222 CLGAVALGGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGG 273 (349)
T ss_dssp HHHHHHHTCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHhCCC--EEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCC
Confidence 5568899999 555443221122232210 12345666777777777775
No 192
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.40 E-value=0.0029 Score=55.52 Aligned_cols=82 Identities=12% Similarity=0.091 Sum_probs=56.0
Q ss_pred HHHHHHHHhcCCCEEEEecc----CHHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCC
Q 017781 215 KDVKWLQTITKLPILVKGVL----TAED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 285 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~vK~v~----~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI 285 (366)
..++..|+. ++..+-+.-. +.+. .+...|.+-+-- ++-..+.+.++ -++|||+.|+|
T Consensus 93 ~~i~~Akk~-GL~tIqR~FliDs~al~~~~~~I~~~kPD~iEiLP--------g~v~p~~I~~v-----~~~PiIaGGlI 158 (188)
T 1vkf_A 93 KNYVVAKKN-GIPAVLRFFALDSKAVERGIEQIETLGVDVVEVLP--------GAVAPKVARKI-----PGRTVIAAGLV 158 (188)
T ss_dssp HHHHHHHHT-TCCEEEEEECCSHHHHHHHHHHHHHHTCSEEEEES--------GGGHHHHHTTS-----TTSEEEEESCC
T ss_pred HHHHHHHHc-CCEEeeEEEEEEeHHHhhhhhhccccCCCeEeecC--------CCchHHHHHHh-----cCCCEEEECCc
Confidence 346666653 6655555431 1121 667788876521 12122444444 37899999999
Q ss_pred CCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 286 RRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 286 ~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
++.+|+.+ +..||++|..++.-||.
T Consensus 159 ~t~edv~~-l~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 159 ETEEEARE-ILKHVSAISTSSRILWK 183 (188)
T ss_dssp CSHHHHHH-HTTTSSEEEECCHHHHT
T ss_pred CCHHHHHH-HHCCCeEEEeCCHHHhC
Confidence 99999999 99999999999998885
No 193
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=96.37 E-value=0.23 Score=44.80 Aligned_cols=114 Identities=18% Similarity=0.208 Sum_probs=76.1
Q ss_pred CHHHHHHHHHhc--CCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHc---CCCceEEEec
Q 017781 213 SWKDVKWLQTIT--KLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDG 283 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~vi~~G 283 (366)
+|+-++.++... ++++-+=.+.+.+. .++|++.|.. .-||-.+.+.+....+.+++... +.+..+++.
T Consensus 99 T~eGl~Ai~~L~~eGI~vNvTliFS~~QA~laa~AGa~~iSp--FVgRidd~g~dG~~~v~~i~~~~~~~~~~t~iL~A- 175 (230)
T 1vpx_A 99 TPDGIKAVKTLSAEGIKTNVTLVFSPAQAILAAKAGATYVSP--FVGRMDDLSNDGMRMLGEIVEIYNNYGFETEIIAA- 175 (230)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHHTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHHTCSCEEEEB-
T ss_pred CHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHhCCCeEEEe--ccchhhhccccHHHHHHHHHHHHHHcCCCeEEEee-
Confidence 555444444332 89999999999887 8899997753 33443344444555555555433 235566665
Q ss_pred CCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcC--HHHHHHHHHHHHH
Q 017781 284 GVRRGTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEMLRE 329 (366)
Q Consensus 284 GI~~~~dv~kalalGAd~V~igr~~l~~l~~~G--~~gv~~~~~~l~~ 329 (366)
++|++.++.++..+|+|.+-+.-.++..+...+ .+|++.+.+.+.+
T Consensus 176 S~r~~~~v~~~~l~G~d~~Tip~~~l~~l~~h~lt~~gv~~F~~d~~~ 223 (230)
T 1vpx_A 176 SIRHPMHVVEAALMGVDIVTMPFAVLEKLFKHPMTDLGIERFMEDWKK 223 (230)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCCEEECCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 499999999999999999999988888765433 3556555555443
No 194
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=96.37 E-value=0.0071 Score=54.59 Aligned_cols=81 Identities=15% Similarity=0.194 Sum_probs=56.1
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHhCcCEEEecHHHHHHhhhcCH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVYSLAAEGE 317 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~-~dv~kalalGAd~V~igr~~l~~l~~~G~ 317 (366)
.++|+|++++|.+ ..+.+..+++.++ + -+++.+||+-. .+..+++..|||.+.+|||++.+ ..+
T Consensus 132 ~~~g~~GvV~sat----------~p~e~~~ir~~~~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~A---~dP 196 (222)
T 4dbe_A 132 REISPKGIVVGGT----------KLDHITQYRRDFE-K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNA---GNP 196 (222)
T ss_dssp HHHCCSEEEECTT----------CHHHHHHHHHHCT-T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHTS---SSH
T ss_pred HHhCCCEEEECCC----------CHHHHHHHHHhCC-C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcCC---CCH
Confidence 6789999998652 1245667777775 4 58888999853 26778888999999999999764 222
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 017781 318 KGVRRVLEMLREEFELAMAL 337 (366)
Q Consensus 318 ~gv~~~~~~l~~el~~~m~~ 337 (366)
....+.++++++.....
T Consensus 197 ---~~aa~~i~~~i~~~~~~ 213 (222)
T 4dbe_A 197 ---LTALRTINKIIEDKVMK 213 (222)
T ss_dssp ---HHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHH
Confidence 23455666666664443
No 195
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=96.36 E-value=0.013 Score=55.05 Aligned_cols=82 Identities=17% Similarity=0.167 Sum_probs=62.7
Q ss_pred HHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH
Q 017781 215 KDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 289 (366)
Q Consensus 215 ~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~ 289 (366)
+.++++|+.. ..|+.| .+-+.++ .++|+|.|-+.|. +.+.+.++++.+++++.+.++||| +.+
T Consensus 196 ~Av~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn~----------s~~~l~~av~~~~~~v~leaSGGI-t~~ 263 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDNM----------SISEIKKAVDIVNGKSVLEVSGCV-NIR 263 (300)
T ss_dssp HHHHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEESSC-CTT
T ss_pred HHHHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHhhcCceEEEEECCC-CHH
Confidence 4577788765 345544 5667766 8999999999883 336667777767678999999999 677
Q ss_pred HHHHHHHhCcCEEEecHHH
Q 017781 290 DVFKALALGASGIFIGRPV 308 (366)
Q Consensus 290 dv~kalalGAd~V~igr~~ 308 (366)
.+.+..+.|+|.+.+|...
T Consensus 264 ~i~~~A~tGVD~IsvGalt 282 (300)
T 3l0g_A 264 NVRNIALTGVDYISIGCIT 282 (300)
T ss_dssp THHHHHTTTCSEEECGGGT
T ss_pred HHHHHHHcCCCEEEeCccc
Confidence 8887778999999999643
No 196
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=96.34 E-value=0.18 Score=48.94 Aligned_cols=195 Identities=12% Similarity=0.126 Sum_probs=102.4
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCcee-cCCCCCCCHHHHh-ccCCCceEEE-----------eee--cCCHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSSWSTSSVEEVA-STGPGIRFFQ-----------LYV--YKDRN 136 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~-vs~~~~~~~e~i~-~~~~~~~~~Q-----------ly~--~~d~~ 136 (366)
.|++||=+|.......+--..++++|+++|+-.+ ..++. .+.+. ... .-|| +|. .-..+
T Consensus 28 ~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k---~~tl~s~~~---~~fq~~~~~~~~~ye~~~~~~l~~e 101 (385)
T 1vli_A 28 PVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQ---ADRMYQKDP---GLYKTAAGKDVSIFSLVQSMEMPAE 101 (385)
T ss_dssp CCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBC---GGGGTSCCC------------CCCHHHHGGGBSSCGG
T ss_pred CcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeec---cCcccCcch---hhhccCCCCCccHHHHHHhcCCCHH
Confidence 6899998865432222223588999999998876 33332 22221 100 0122 221 23567
Q ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC-CHH
Q 017781 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL-SWK 215 (366)
Q Consensus 137 ~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~ 215 (366)
....+.+.+++.|...+. .|. ..+.-|+...+.+|. +. + ...+. .+.
T Consensus 102 ~~~~L~~~~~~~Gi~~~s----tpf-D~~svd~l~~~~vd~-~K-----------I---------------gS~~~~N~p 149 (385)
T 1vli_A 102 WILPLLDYCREKQVIFLS----TVC-DEGSADLLQSTSPSA-FK-----------I---------------ASYEINHLP 149 (385)
T ss_dssp GHHHHHHHHHHTTCEEEC----BCC-SHHHHHHHHTTCCSC-EE-----------E---------------CGGGTTCHH
T ss_pred HHHHHHHHHHHcCCcEEE----ccC-CHHHHHHHHhcCCCE-EE-----------E---------------CcccccCHH
Confidence 778888889999876542 222 222223332232221 00 0 01122 456
Q ss_pred HHHHHHHhcCCCEEEEec-cCHHH--------HHcCC-cEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCC
Q 017781 216 DVKWLQTITKLPILVKGV-LTAED--------VQAGA-AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 285 (366)
Q Consensus 216 ~i~~lr~~~~~pv~vK~v-~~~~d--------~~aGa-d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI 285 (366)
.++.+-+ +++||++|.. .+.++ .+.|. +.+.+.....+.-......+.+++.+++..+ .+||..++=-
T Consensus 150 LL~~va~-~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~-~lpVG~SdHt 227 (385)
T 1vli_A 150 LLKYVAR-LNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFP-EAVIGFSDHS 227 (385)
T ss_dssp HHHHHHT-TCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHST-TSEEEEEECC
T ss_pred HHHHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcC-CCCEEeCCCC
Confidence 6777766 5899999955 46666 66787 5555543211110001113456666666542 4788665532
Q ss_pred CC-HHHHHHHHHhCcCEEEecHHH
Q 017781 286 RR-GTDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 286 ~~-~~dv~kalalGAd~V~igr~~ 308 (366)
.. ..-...|+++||+ +|=+-|
T Consensus 228 ~G~~~~~~AAvAlGA~--iIEkHf 249 (385)
T 1vli_A 228 EHPTEAPCAAVRLGAK--LIEKHF 249 (385)
T ss_dssp SSSSHHHHHHHHTTCS--EEEEEB
T ss_pred CCchHHHHHHHHcCCC--EEEeCC
Confidence 22 4455568899999 455443
No 197
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.34 E-value=0.0038 Score=58.48 Aligned_cols=82 Identities=22% Similarity=0.222 Sum_probs=61.3
Q ss_pred HHHHHHHHhcC--CCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCC---CceEEEecCC
Q 017781 215 KDVKWLQTITK--LPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGV 285 (366)
Q Consensus 215 ~~i~~lr~~~~--~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~vi~~GGI 285 (366)
+.++.+|+..+ .+|.| .+.+.++ .++|+|+|.+.|. +.+.+.++++.+++ ++++.++|||
T Consensus 181 ~av~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn~----------~~e~l~~av~~l~~~~~~v~ieASGGI 249 (285)
T 1o4u_A 181 RAVQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDNL----------SPEEVKDISRRIKDINPNVIVEVSGGI 249 (285)
T ss_dssp HHHHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred HHHHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCceEEEECCC
Confidence 35788888763 46666 5667766 8999999999882 23444455544433 7999999999
Q ss_pred CCHHHHHHHHHhCcCEEEecHHH
Q 017781 286 RRGTDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 286 ~~~~dv~kalalGAd~V~igr~~ 308 (366)
+.+.+.+..+.|+|.+.+|+..
T Consensus 250 -t~eni~~~a~tGVD~IsvGslt 271 (285)
T 1o4u_A 250 -TEENVSLYDFETVDVISSSRLT 271 (285)
T ss_dssp -CTTTGGGGCCTTCCEEEEGGGT
T ss_pred -CHHHHHHHHHcCCCEEEEeHHH
Confidence 6788888888999999999854
No 198
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=96.33 E-value=0.022 Score=55.36 Aligned_cols=116 Identities=16% Similarity=0.089 Sum_probs=85.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+.+.+.+.++++.+.|++++-+++.++ +...
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~ 194 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPVA------------------------------------------------DDGP 194 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGC------------------------------------------------TTCH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCCC------------------------------------------------ChHH
Confidence 4677777888888889999987764320 2234
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
.+.++.+|+.+ +.+|.++.- .+.++ .+.|+++|- +. ..+..++.+.++++.+ ++||+
T Consensus 195 -~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPI~ 263 (388)
T 2nql_A 195 -AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPWFAE-------AP-VWTEDIAGLEKVSKNT--DVPIA 263 (388)
T ss_dssp -HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCSCEE-------CC-SCTTCHHHHHHHHTSC--CSCEE
T ss_pred -HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE-------CC-CChhhHHHHHHHHhhC--CCCEE
Confidence 66788888876 578888743 35554 567888774 11 1234677888888776 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
+++.+.+..++.+++..| +|.|++-..
T Consensus 264 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 291 (388)
T 2nql_A 264 VGEEWRTHWDMRARIERCRIAIVQPEMG 291 (388)
T ss_dssp ECTTCCSHHHHHHHHTTSCCSEECCCHH
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEecCC
Confidence 999999999999999987 899999543
No 199
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.29 E-value=0.14 Score=47.22 Aligned_cols=92 Identities=23% Similarity=0.395 Sum_probs=58.9
Q ss_pred HHHHHHHHHhcCCCEEEEecc--CHHH--------HHcCCcEEEEcCCCccCCC-C--CcchHHHHHHHHHHcCCCceEE
Q 017781 214 WKDVKWLQTITKLPILVKGVL--TAED--------VQAGAAGIIVSNHGARQLD-Y--VPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~vK~v~--~~~d--------~~aGad~I~vs~~gg~~~~-~--~~~~~~~l~~i~~~~~~~i~vi 280 (366)
...++++-+ +++||++|... +.++ ...|.+-+++--.|++... . ....+.+++.+++.. .+||+
T Consensus 120 ~~ll~~~a~-~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~--~~pVi 196 (262)
T 1zco_A 120 FELLKEVGK-VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELS--HLPII 196 (262)
T ss_dssp HHHHHHHTT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEE
T ss_pred HHHHHHHHh-cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhh--CCCEE
Confidence 345666666 68999999664 6776 5667755555444544321 1 122445677776665 58998
Q ss_pred EecCCCCHH-----H-HHHHHHhCcCEEEecHHH
Q 017781 281 LDGGVRRGT-----D-VFKALALGASGIFIGRPV 308 (366)
Q Consensus 281 ~~GGI~~~~-----d-v~kalalGAd~V~igr~~ 308 (366)
++..=..+. . +..|.++||++++|-+-+
T Consensus 197 ~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 197 VDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHP 230 (262)
T ss_dssp ECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred EEcCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 876443333 4 345778999999999865
No 200
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=96.28 E-value=0.011 Score=55.44 Aligned_cols=81 Identities=23% Similarity=0.370 Sum_probs=60.6
Q ss_pred HHHHHHHHhcC-CCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH
Q 017781 215 KDVKWLQTITK-LPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 289 (366)
Q Consensus 215 ~~i~~lr~~~~-~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~ 289 (366)
+.++.+|+..+ .|+.| .+-+.++ .++|+|.|-+.|. +.+.+.++++.+.+++++.++||| +.+
T Consensus 198 ~Av~~~r~~~p~~~ieV-Evdtlde~~eAl~aGaD~I~LDn~----------~~~~l~~av~~i~~~v~ieaSGGI-~~~ 265 (298)
T 3gnn_A 198 EALDAAFALNAEVPVQI-EVETLDQLRTALAHGARSVLLDNF----------TLDMMRDAVRVTEGRAVLEVSGGV-NFD 265 (298)
T ss_dssp HHHHHHHHHC--CCCEE-EESSHHHHHHHHHTTCEEEEEESC----------CHHHHHHHHHHHTTSEEEEEESSC-STT
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCC-CHH
Confidence 34777887653 44433 3567766 7899999999882 335566666666668999999999 677
Q ss_pred HHHHHHHhCcCEEEecHH
Q 017781 290 DVFKALALGASGIFIGRP 307 (366)
Q Consensus 290 dv~kalalGAd~V~igr~ 307 (366)
.+.+..+.|+|.+.+|+.
T Consensus 266 ~i~~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 266 TVRAIAETGVDRISIGAL 283 (298)
T ss_dssp THHHHHHTTCSEEECGGG
T ss_pred HHHHHHHcCCCEEEECCe
Confidence 788888899999999974
No 201
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=96.22 E-value=0.0061 Score=55.42 Aligned_cols=61 Identities=13% Similarity=0.181 Sum_probs=46.6
Q ss_pred CCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 242 GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 242 Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
|...|.+-. .|. ....+.+.++++.. .++||++-|||++++++.++.. |||+|.+|+++..
T Consensus 159 g~~~vY~e~-sG~-----~g~~~~v~~ir~~~-~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~ 219 (235)
T 3w01_A 159 RLPVMYIEY-SGI-----YGDVSKVQAVSEHL-TETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK 219 (235)
T ss_dssp CCSEEEEEC-TTS-----CCCHHHHHHHHTTC-SSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH
T ss_pred CCCEEEEec-CCC-----cCCHHHHHHHHHhc-CCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec
Confidence 556666544 232 12567788887655 2689999999999999988776 9999999999875
No 202
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.18 E-value=0.014 Score=54.70 Aligned_cols=82 Identities=15% Similarity=0.193 Sum_probs=59.9
Q ss_pred HHHHHHHHhcC-CCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCC---CceEEEecCCC
Q 017781 215 KDVKWLQTITK-LPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVR 286 (366)
Q Consensus 215 ~~i~~lr~~~~-~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~i~vi~~GGI~ 286 (366)
+.++..|+..+ .|+.| .+.+.++ .++|+|.|.++|. +.+.+.++++.+++ ++++.++|||
T Consensus 183 ~av~~ar~~~~~~~I~V-ev~t~eea~eal~aGaD~I~LDn~----------~~~~~~~~v~~l~~~~~~v~ieaSGGI- 250 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEV-EVDSLEQLDAVLPEKPELILLDNF----------AVWQTQTAVQRRDSRAPTVMLESSGGL- 250 (284)
T ss_dssp HHHHHHHHHCTTSCEEE-EESSHHHHHHHGGGCCSEEEEETC----------CHHHHHHHHHHHHHHCTTCEEEEESSC-
T ss_pred HHHHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCeEEEEECCC-
Confidence 45788888753 25555 5667766 8899999999883 22334444443332 7899999999
Q ss_pred CHHHHHHHHHhCcCEEEecHHH
Q 017781 287 RGTDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~igr~~ 308 (366)
+.+.+.+....|+|.+.+|+..
T Consensus 251 t~~~i~~~a~tGVD~isvG~l~ 272 (284)
T 1qpo_A 251 SLQTAATYAETGVDYLAVGALT 272 (284)
T ss_dssp CTTTHHHHHHTTCSEEECGGGT
T ss_pred CHHHHHHHHhcCCCEEEECHHH
Confidence 6888999999999999999843
No 203
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=96.16 E-value=0.055 Score=52.36 Aligned_cols=123 Identities=12% Similarity=0.136 Sum_probs=89.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+.+.+.+.++++.+.|++++-+.+.++..+ + ..+...
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~---------~---------------------------------~~~~~~ 185 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVS---------W---------------------------------APDVKM 185 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTST---------T---------------------------------CCCHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccc---------c---------------------------------ccchHH
Confidence 4677777788888889999999887653210 0 001223
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +.+|.++.- .+.++ .+.|+++|- +. ..+..++.+.++++.+ ++||+
T Consensus 186 ~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~--~iPIa 255 (382)
T 1rvk_A 186 DLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLGFDWIE-------EP-MDEQSLSSYKWLSDNL--DIPVV 255 (382)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTTCSEEE-------CC-SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEe-------CC-CChhhHHHHHHHHhhC--CCCEE
Confidence 456788899877 588888843 45554 667888774 11 1234678888888887 79999
Q ss_pred EecCCCC-HHHHHHHHHhC-cCEEEecHH
Q 017781 281 LDGGVRR-GTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 281 ~~GGI~~-~~dv~kalalG-Ad~V~igr~ 307 (366)
+++.+.+ ..|+.+++..| +|.|++--.
T Consensus 256 ~dE~~~~~~~~~~~~i~~~~~d~v~ik~~ 284 (382)
T 1rvk_A 256 GPESAAGKHWHRAEWIKAGACDILRTGVN 284 (382)
T ss_dssp ECSSCSSHHHHHHHHHHTTCCSEEEECHH
T ss_pred EeCCccCcHHHHHHHHHcCCCCEEeeCch
Confidence 9999999 99999999987 899999654
No 204
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=96.11 E-value=0.046 Score=53.19 Aligned_cols=115 Identities=14% Similarity=0.042 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++-+.+... .+..
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~ 179 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLD------------------------------------------------SLSI 179 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCS------------------------------------------------SHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCC------------------------------------------------hHHH
Confidence 5677777888888889999987643210 0122
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +.+|.++.- .+.++ .+.|+++|-- . ..+..++.+.++++.+ ++||+
T Consensus 180 ~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq-------P-~~~~d~~~~~~l~~~~--~iPIa 249 (391)
T 2qgy_A 180 SIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIEE-------P-VDGENISLLTEIKNTF--NMKVV 249 (391)
T ss_dssp HHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEEC-------S-SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEeC-------C-CChhhHHHHHHHHhhC--CCCEE
Confidence 456788888876 578888843 45554 6678888741 1 1234678888888887 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
+++.+.+..++.+++..| +|.|++-
T Consensus 250 ~dE~~~~~~~~~~~i~~~~~d~v~ik 275 (391)
T 2qgy_A 250 TGEKQSGLVHFRELISRNAADIFNPD 275 (391)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred EcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 999999999999999987 8999984
No 205
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=96.09 E-value=0.04 Score=53.66 Aligned_cols=116 Identities=12% Similarity=0.072 Sum_probs=84.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 213 (366)
+.+.+.+.++++.++|++++-+.+..+ +....
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~~ 193 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQP------------------------------------------------DGALD 193 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCS------------------------------------------------CHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC------------------------------------------------CHHHH
Confidence 677777788888889999987754311 11224
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|- +. ..+..++.+.++++.+ ++||++
T Consensus 194 ~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~--~iPIa~ 263 (393)
T 2og9_A 194 IARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWIE-------EP-LDAYDHEGHAALALQF--DTPIAT 263 (393)
T ss_dssp HHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEE-------CC-SCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCcccHHHHHHHHHhC--CCCEEe
Confidence 56678888876 578888732 35554 567888774 11 1234677888888887 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
++.+.+..++.+++..| +|.|++--.
T Consensus 264 dE~~~~~~~~~~~i~~~~~d~v~ik~~ 290 (393)
T 2og9_A 264 GEMLTSAAEHGDLIRHRAADYLMPDAP 290 (393)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred CCCcCCHHHHHHHHHCCCCCEEeeCcc
Confidence 99999999999999988 899998643
No 206
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=96.01 E-value=0.28 Score=47.69 Aligned_cols=120 Identities=13% Similarity=0.053 Sum_probs=87.4
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCC-
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR- 210 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~- 210 (366)
..+.+.+.+.++++.+.|++++-+.. +|.. .+.
T Consensus 143 ~~~~~~~~~~a~~~~~~Gf~~iKik~-spvG---------------------------------------------~~~~ 176 (401)
T 2hzg_A 143 GDTPQETLERARAARRDGFAAVKFGW-GPIG---------------------------------------------RGTV 176 (401)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEES-TTTT---------------------------------------------SSCH
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEcC-CCCC---------------------------------------------CCHH
Confidence 35777778888888899999998764 2210 011
Q ss_pred CCCHHHHHHHHHhc--CCCEEEEec--c--CHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHH-HcCC
Q 017781 211 SLSWKDVKWLQTIT--KLPILVKGV--L--TAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVK-ATQG 275 (366)
Q Consensus 211 ~~~~~~i~~lr~~~--~~pv~vK~v--~--~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~-~~~~ 275 (366)
....+.++.+|+.+ +++|.++.- . +.++ .+.|++.|- +. ..+..++.+.++++ .+
T Consensus 177 ~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~-- 246 (401)
T 2hzg_A 177 AADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLE-------EP-FDAGALAAHAALAGRGA-- 246 (401)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEEE-------CC-SCTTCHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCccCHHHHHHHHhhCC--
Confidence 22456788888887 578888843 4 5555 677888874 11 12346778888877 66
Q ss_pred CceEEEecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 276 RIPVFLDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 276 ~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
++||++++.+.+..++.+++..| +|.|++-..
T Consensus 247 ~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 279 (401)
T 2hzg_A 247 RVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCG 279 (401)
T ss_dssp SSEEEECTTCSSHHHHHHHHHHSCCSEEEECHH
T ss_pred CCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcc
Confidence 79999999999999999999987 899999643
No 207
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=95.98 E-value=0.099 Score=46.98 Aligned_cols=126 Identities=17% Similarity=0.239 Sum_probs=79.1
Q ss_pred eecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccC
Q 017781 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (366)
Q Consensus 130 y~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (366)
|...+.+.+.+-++.++++|++.+++.+-.+ |
T Consensus 70 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~------------------------------------------------d 101 (224)
T 2bdq_A 70 YNDLELRIMEEDILRAVELESDALVLGILTS------------------------------------------------N 101 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCT------------------------------------------------T
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECC------------------------------------------------C
Confidence 5455667888889999999999999855322 2
Q ss_pred CCCCHHHHHHHHHhc-CCCEEEEec------cCHHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCc
Q 017781 210 RSLSWKDVKWLQTIT-KLPILVKGV------LTAED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI 277 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~-~~pv~vK~v------~~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i 277 (366)
...+.+.++++.+.. +.|+.+=-. .++.+ .+.|+|.|--|+ |..-......++.|+++.+...+++
T Consensus 102 g~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG--~~~~~~a~~g~~~L~~Lv~~a~~ri 179 (224)
T 2bdq_A 102 NHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHG--SSNGEPIIENIKHIKALVEYANNRI 179 (224)
T ss_dssp SSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECS--CSSCCCGGGGHHHHHHHHHHHTTSS
T ss_pred CCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCC--CCCCCcHHHHHHHHHHHHHhhCCCe
Confidence 234455555555443 445444321 12221 778999997655 3211113345667777776656689
Q ss_pred eEEEecCCCCHHHHHHHH-HhCcCEEEecH
Q 017781 278 PVFLDGGVRRGTDVFKAL-ALGASGIFIGR 306 (366)
Q Consensus 278 ~vi~~GGI~~~~dv~kal-alGAd~V~igr 306 (366)
.|++-|||+ .+.+.+-+ .+|++.+-...
T Consensus 180 ~Im~GgGV~-~~Ni~~l~~~tGv~e~H~s~ 208 (224)
T 2bdq_A 180 EIMVGGGVT-AENYQYICQETGVKQAHGTR 208 (224)
T ss_dssp EEEECSSCC-TTTHHHHHHHHTCCEEEETT
T ss_pred EEEeCCCCC-HHHHHHHHHhhCCCEEcccc
Confidence 999999996 35555555 47999988643
No 208
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.98 E-value=0.03 Score=50.82 Aligned_cols=77 Identities=17% Similarity=0.231 Sum_probs=55.0
Q ss_pred CHHHHHHHHHhcCCCEEEE-eccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 213 SWKDVKWLQTITKLPILVK-GVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK-~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
..+.|+++++.++..++-. .+++.++ .++|||+|+.-+ .+.+.+..+++. .+|++. |+.|
T Consensus 72 a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~----------~~~~vi~~~~~~---gi~~ip--Gv~T 136 (232)
T 4e38_A 72 AVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPG----------FNPNTVRACQEI---GIDIVP--GVNN 136 (232)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSS----------CCHHHHHHHHHH---TCEEEC--EECS
T ss_pred HHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCC----------CCHHHHHHHHHc---CCCEEc--CCCC
Confidence 3467999999875444433 3567666 999999996321 233444444432 678777 5889
Q ss_pred HHHHHHHHHhCcCEEEe
Q 017781 288 GTDVFKALALGASGIFI 304 (366)
Q Consensus 288 ~~dv~kalalGAd~V~i 304 (366)
++++.+|+.+|||.|.+
T Consensus 137 ptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 137 PSTVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999999987
No 209
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=95.89 E-value=0.076 Score=51.09 Aligned_cols=117 Identities=9% Similarity=0.050 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHH-cCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 133 KDRNVVAQLVRRAER-AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~-~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
.+++.+.+.++++.+ .|++++-+.+.++. ..
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~g~~~------------------------------------------------~~ 172 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKLGART------------------------------------------------PA 172 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECSSSC------------------------------------------------HH
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEecCCCC------------------------------------------------hH
Confidence 467777777888888 99999887664320 01
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
...+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- +. ..+..++.+.++++.+ ++||
T Consensus 173 ~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~ipI 242 (370)
T 1nu5_A 173 QDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELVE-------QP-VPRANFGALRRLTEQN--GVAI 242 (370)
T ss_dssp HHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTCCEEE-------CC-SCTTCHHHHHHHHHHC--SSEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCcceEe-------CC-CCcccHHHHHHHHHhC--CCCE
Confidence 2345677777765 366777633 34444 567888774 11 1234678888888887 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
++++.+.+..|+.+++..| +|.|++--.
T Consensus 243 a~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (370)
T 1nu5_A 243 LADESLSSLSSAFELARDHAVDAFSLKLC 271 (370)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred EeCCCCCCHHHHHHHHHhCCCCEEEEchh
Confidence 9999999999999999987 899999643
No 210
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=95.83 E-value=0.069 Score=51.67 Aligned_cols=112 Identities=11% Similarity=0.054 Sum_probs=80.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+.+.+.+.++++.+.|++++-+++... ...
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-------------------------------------------------~~~ 174 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGAD-------------------------------------------------WQS 174 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCSC-------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCC-------------------------------------------------HHH
Confidence 4677778888888899999998765420 012
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +.||.++.- .+.++ .+.|+ +|- +. -+ .++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------~P--~~-~~~~~~~l~~~~--~iPI~ 241 (379)
T 2rdx_A 175 DIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-ILE-------QP--CR-SYEECQQVRRVA--DQPMK 241 (379)
T ss_dssp HHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EEE-------CC--SS-SHHHHHHHHTTC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EEe-------CC--cC-CHHHHHHHHhhC--CCCEE
Confidence 345677777776 467777733 34444 45676 553 11 11 677888888776 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++.+.+..|+.+++..| +|.|++-.
T Consensus 242 ~de~i~~~~~~~~~i~~~~~d~v~ik~ 268 (379)
T 2rdx_A 242 LDECVTGLHMAQRIVADRGAEICCLKI 268 (379)
T ss_dssp ECTTCCSHHHHHHHHHHTCCSEEEEET
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 999999999999999987 89999954
No 211
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=95.79 E-value=0.0069 Score=61.97 Aligned_cols=70 Identities=21% Similarity=0.254 Sum_probs=52.6
Q ss_pred HHcCCcEEEEcCCCccC-C-CCCcchHHHHHHHHHHcCCCceEEEecCCCCH-----------HHHHHHHHhCcCEEEec
Q 017781 239 VQAGAAGIIVSNHGARQ-L-DYVPATIMALEEVVKATQGRIPVFLDGGVRRG-----------TDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~-~-~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~-----------~dv~kalalGAd~V~ig 305 (366)
.+.|||.+++.+-.+.. . .......+.+.++++.+ .+||++.|||++. +++.+.+.+|||.|.||
T Consensus 290 ~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~--~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~ig 367 (555)
T 1jvn_A 290 YQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV--FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIG 367 (555)
T ss_dssp HHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC--CSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEEC
T ss_pred HHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC--CCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEEC
Confidence 77899999877643311 0 01233577788777766 7999999999998 44999999999999999
Q ss_pred HHHHH
Q 017781 306 RPVVY 310 (366)
Q Consensus 306 r~~l~ 310 (366)
+..+.
T Consensus 368 t~~~~ 372 (555)
T 1jvn_A 368 TDAVY 372 (555)
T ss_dssp HHHHH
T ss_pred CHHhh
Confidence 98754
No 212
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=95.78 E-value=0.08 Score=53.88 Aligned_cols=78 Identities=17% Similarity=0.103 Sum_probs=55.7
Q ss_pred eccCHHH----HHcC---CcEEEEcCCCccC--CCC--CcchHHHHHHHHHHc----CCCceEEEecCCCCHHHHHHHHH
Q 017781 232 GVLTAED----VQAG---AAGIIVSNHGARQ--LDY--VPATIMALEEVVKAT----QGRIPVFLDGGVRRGTDVFKALA 296 (366)
Q Consensus 232 ~v~~~~d----~~aG---ad~I~vs~~gg~~--~~~--~~~~~~~l~~i~~~~----~~~i~vi~~GGI~~~~dv~kala 296 (366)
-+.+.++ .+.| +|+|.++.-.-+. .+. .+..++.+.++++.+ ..++|+++.||| +.+++.+.++
T Consensus 114 S~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~ 192 (540)
T 3nl6_A 114 SVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLY 192 (540)
T ss_dssp EECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHH
T ss_pred ECCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHH
Confidence 4467776 7789 9999986532211 111 123466777776654 137999999999 7899999998
Q ss_pred --------hCcCEEEecHHHHH
Q 017781 297 --------LGASGIFIGRPVVY 310 (366)
Q Consensus 297 --------lGAd~V~igr~~l~ 310 (366)
.|||+|.+++.++.
T Consensus 193 ~~~~~g~~~GadgvAVvsaI~~ 214 (540)
T 3nl6_A 193 QCVSSNGKRSLDGICVVSDIIA 214 (540)
T ss_dssp HCBCTTSSCBCSCEEESHHHHT
T ss_pred hhcccccccCceEEEEeHHHhc
Confidence 89999999998864
No 213
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=95.75 E-value=0.054 Score=52.72 Aligned_cols=116 Identities=13% Similarity=0.056 Sum_probs=84.5
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
..+++.+.+.++++.+.|++++-+.+++. +.
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~-------------------------------------------------~~ 179 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRA-------------------------------------------------PR 179 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSC-------------------------------------------------HH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCC-------------------------------------------------HH
Confidence 46788888888888889999987765431 11
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHH-HHcCCCce
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVV-KATQGRIP 278 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~-~~~~~~i~ 278 (366)
.+.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|- +. ..+..++.+.+++ +.+ .+|
T Consensus 180 ~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~--~iP 249 (389)
T 3ozy_A 180 KDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWFE-------EP-LSIDDIEGHRILRAQGT--PVR 249 (389)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEE-------SC-SCTTCHHHHHHHHTTCC--SSE
T ss_pred HHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhcCC--CCC
Confidence 2345677788776 567777743 34444 667888884 11 1223577788887 666 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 279 VFLDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 279 vi~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
|++++.+.+..|+.+++..| +|.|++--
T Consensus 250 Ia~dE~i~~~~~~~~~i~~~~~d~v~ik~ 278 (389)
T 3ozy_A 250 IATGENLYTRNAFNDYIRNDAIDVLQADA 278 (389)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred EEeCCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999999987 89999864
No 214
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=95.68 E-value=0.076 Score=51.79 Aligned_cols=115 Identities=13% Similarity=0.068 Sum_probs=82.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 213 (366)
+.+.+.+.++++.+.|++++-+.+..+ +....
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~d 206 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQP------------------------------------------------NCAED 206 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS------------------------------------------------CHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCC------------------------------------------------CHHHH
Confidence 677777778888889999987765321 01124
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.++.+|+.+ +++|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ ++||++
T Consensus 207 ~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~ 276 (398)
T 2pp0_A 207 IRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWIEE--------PLDAYDIEGHAQLAAAL--DTPIAT 276 (398)
T ss_dssp HHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTCSCEEC--------CSCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCceeeC--------CCChhhHHHHHHHHhhC--CCCEEe
Confidence 55677788776 577777733 35544 5567776641 11234678888888887 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++.+.+..++.+++..| +|.|++--
T Consensus 277 dE~~~~~~~~~~~i~~~~~d~v~ik~ 302 (398)
T 2pp0_A 277 GEMLTSFREHEQLILGNASDFVQPDA 302 (398)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred cCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999988 89999864
No 215
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=95.62 E-value=0.42 Score=42.82 Aligned_cols=112 Identities=13% Similarity=0.120 Sum_probs=74.1
Q ss_pred CHHHHHHHHHhc--CCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHc---CCCceEEEec
Q 017781 213 SWKDVKWLQTIT--KLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDG 283 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~vi~~G 283 (366)
+|+-++.++... ++++-+=.+.+.+. .++|++.|.. .-||-.+++.+....+.++++.. +.+..|++.
T Consensus 89 T~eGl~A~~~L~~~GI~vn~TliFS~~QA~~aa~AGa~~iSp--fvgRidd~g~~G~~~i~~~~~~y~~~~~~t~il~A- 165 (220)
T 1l6w_A 89 TAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAGAEYVAP--YVNRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAA- 165 (220)
T ss_dssp SHHHHHHHHHHHHHTCCEEEEEECSHHHHHHHHHHTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHHCTTCEEEEB-
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHCCCeEEEe--ccchhhcccccHHHHHHHHHHHHHhcCCCeEEeec-
Confidence 555444444332 89999999999887 8899987754 33443344444555555555433 235556665
Q ss_pred CCCCHHHHHHHHHhCcCEEEecHHHHHHhhhcC--HHHHHHHHHHH
Q 017781 284 GVRRGTDVFKALALGASGIFIGRPVVYSLAAEG--EKGVRRVLEML 327 (366)
Q Consensus 284 GI~~~~dv~kalalGAd~V~igr~~l~~l~~~G--~~gv~~~~~~l 327 (366)
++|++.++.++..+|+|.+-+.-.++..+...+ ..+++.+.+.+
T Consensus 166 S~r~~~~v~~~~l~G~d~~Tip~~~l~~l~~h~lt~~~v~~F~~D~ 211 (220)
T 1l6w_A 166 SFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDW 211 (220)
T ss_dssp CCSSHHHHHHHHHTTCSEEEECHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCCeEECCHHHHHHHHcCCChHHHHHHHHHHH
Confidence 599999999999999999999988888765433 23444444333
No 216
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.59 E-value=0.35 Score=45.50 Aligned_cols=85 Identities=11% Similarity=0.107 Sum_probs=55.8
Q ss_pred HHHHHHHHhcCCCEEEEeccC------HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 215 KDVKWLQTITKLPILVKGVLT------AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~vK~v~~------~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.|+.+++. +.++.|-.... .++ .++|||+|.+-+ +++.+.+.++.+.+ ++|++
T Consensus 148 ~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~---------~~~~~~~~~i~~~~--~~P~~ 215 (305)
T 3ih1_A 148 QKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEA---------LQSEEEFRLFNSKV--NAPLL 215 (305)
T ss_dssp HHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETT---------CCSHHHHHHHHHHS--CSCBE
T ss_pred HHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcC---------CCCHHHHHHHHHHc--CCCEE
Confidence 345666665 56655554422 333 999999998833 35678888898888 67887
Q ss_pred Ee---cCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 281 LD---GGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 281 ~~---GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
++ +|-.-.-.+.+.-++|.+.|.+|...+.+
T Consensus 216 ~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra 249 (305)
T 3ih1_A 216 ANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRV 249 (305)
T ss_dssp EECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHH
T ss_pred EeecCCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 53 44221223444456899999999877665
No 217
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=95.51 E-value=0.12 Score=49.51 Aligned_cols=117 Identities=16% Similarity=0.185 Sum_probs=82.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++-+.++++ +...
T Consensus 139 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~ 170 (366)
T 1tkk_A 139 NSPEEMAADAENYLKQGFQTLKIKVGKD------------------------------------------------DIAT 170 (366)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSS------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEeCCC------------------------------------------------CHHH
Confidence 4677777777788888999988765431 0112
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HH--cCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCce
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP 278 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~--aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~ 278 (366)
+.+.++.+|+.+ +.++.+..- .+.++ .+ .|+++|- +. ..+..++.+.++++.+ .+|
T Consensus 171 d~~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ip 240 (366)
T 1tkk_A 171 DIARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVE-------QP-VHKDDLAGLKKVTDAT--DTP 240 (366)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEE-------CC-SCTTCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCCceEEE-------CC-CCcccHHHHHHHHhhC--CCC
Confidence 345677777766 466777633 34444 45 6766663 11 1234678888888877 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 279 VFLDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 279 vi~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
|++++-+.+..|+.+++..| +|.|++--.
T Consensus 241 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 270 (366)
T 1tkk_A 241 IMADESVFTPRQAFEVLQTRSADLINIKLM 270 (366)
T ss_dssp EEECTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred EEEcCCCCCHHHHHHHHHhCCCCEEEeehh
Confidence 99999999999999999987 899999643
No 218
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.48 E-value=0.037 Score=51.83 Aligned_cols=88 Identities=23% Similarity=0.373 Sum_probs=58.7
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHH----HHHhCcCEEEecHHHHHHhh
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~k----alalGAd~V~igr~~l~~l~ 313 (366)
.+.|+|+|++.++.|-...-... ..+++..+++.+.+++|||+--|-.+-.++++ |-.+|||++++-.|+++..
T Consensus 33 i~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~- 111 (292)
T 3daq_A 33 LENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKT- 111 (292)
T ss_dssp HHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-
T ss_pred HHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCC-
Confidence 56899999998876632211111 23455666666777899998666666666664 4448999999999987642
Q ss_pred hcCHHHHHHHHHHHHH
Q 017781 314 AEGEKGVRRVLEMLRE 329 (366)
Q Consensus 314 ~~G~~gv~~~~~~l~~ 329 (366)
.++++.++++.+.+
T Consensus 112 --~~~~l~~~f~~ia~ 125 (292)
T 3daq_A 112 --NQRGLVKHFEAIAD 125 (292)
T ss_dssp --CHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHH
Confidence 45666655555543
No 219
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.44 E-value=0.029 Score=52.79 Aligned_cols=83 Identities=12% Similarity=0.040 Sum_probs=57.3
Q ss_pred CCHHHHHHHHHhcCCCEEEEec-cCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCC
Q 017781 212 LSWKDVKWLQTITKLPILVKGV-LTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 286 (366)
Q Consensus 212 ~~~~~i~~lr~~~~~pv~vK~v-~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~ 286 (366)
.+.+.|+++++.+++||+.|.. ...++ .++|||.|..+. + . ...+.+..+.+. ...+++++ +++
T Consensus 65 ~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~aaGAD~Id~s~-~-~------~~~~li~~i~~~-~~g~~vvv--~v~ 133 (297)
T 4adt_A 65 VDPLKIEEIRKCISINVLAKVRIGHFVEAQILEELKVDMLDESE-V-L------TMADEYNHINKH-KFKTPFVC--GCT 133 (297)
T ss_dssp CCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHHHTTCSEEEEET-T-S------CCSCSSCCCCGG-GCSSCEEE--EES
T ss_pred CCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHHHcCCCEEEcCC-C-C------CHHHHHHHHHhc-CCCCeEEE--EeC
Confidence 3678999999999999999953 34544 889999992211 1 0 011122222221 12577777 599
Q ss_pred CHHHHHHHHHhCcCEEEec
Q 017781 287 RGTDVFKALALGASGIFIG 305 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~ig 305 (366)
+.+++.+++.+|||.|.+.
T Consensus 134 ~~~Ea~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 134 NLGEALRRISEGASMIRTK 152 (297)
T ss_dssp SHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHhCCCCEEEEC
Confidence 9999999999999999886
No 220
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.42 E-value=0.068 Score=47.91 Aligned_cols=77 Identities=21% Similarity=0.258 Sum_probs=55.9
Q ss_pred CHHHHHHHHHhcCCCEEEE-eccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCc------eEEE
Q 017781 213 SWKDVKWLQTITKLPILVK-GVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI------PVFL 281 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK-~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i------~vi~ 281 (366)
..+.|+.+++.++.+++-- .+.+.++ .++|+++|+.-+ .+.+.+..+.+. .+ |++-
T Consensus 51 a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~----------~~~evi~~~~~~---~v~~~~~~~~~P 117 (217)
T 3lab_A 51 GLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSPG----------LTPELIEKAKQV---KLDGQWQGVFLP 117 (217)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEESS----------CCHHHHHHHHHH---HHHCSCCCEEEE
T ss_pred HHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeCC----------CcHHHHHHHHHc---CCCccCCCeEeC
Confidence 3467999999886554444 4578877 999999996422 133445444432 45 7777
Q ss_pred ecCCCCHHHHHHHHHhCcCEEEe
Q 017781 282 DGGVRRGTDVFKALALGASGIFI 304 (366)
Q Consensus 282 ~GGI~~~~dv~kalalGAd~V~i 304 (366)
|+.|++++.+|+.+|||.|-+
T Consensus 118 --G~~TptE~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 118 --GVATASEVMIAAQAGITQLKC 138 (217)
T ss_dssp --EECSHHHHHHHHHTTCCEEEE
T ss_pred --CCCCHHHHHHHHHcCCCEEEE
Confidence 789999999999999999976
No 221
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.41 E-value=0.046 Score=52.95 Aligned_cols=85 Identities=15% Similarity=0.205 Sum_probs=57.5
Q ss_pred HHHHHHHHhcCCCEEEEeccC---HHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 215 KDVKWLQTITKLPILVKGVLT---AED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~vK~v~~---~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
+.++++|+.-.+++.+-...+ .+. .++|+|.|++....|. ....++.+.++++..+ +++|++ |.+.+
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~----~~~~~~~I~~ik~~~p-~v~Vi~-G~v~t 159 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGH----SEGVLQRIRETRAAYP-HLEIIG-GNVAT 159 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHCT-TCEEEE-EEECS
T ss_pred HHHHHHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCC----CHHHHHHHHHHHHhcC-CCceEe-eeeCC
Confidence 346666664334444433222 222 8999999998543331 1234566777877663 578777 67899
Q ss_pred HHHHHHHHHhCcCEEEec
Q 017781 288 GTDVFKALALGASGIFIG 305 (366)
Q Consensus 288 ~~dv~kalalGAd~V~ig 305 (366)
.+++.++..+|||+|.+|
T Consensus 160 ~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 160 AEGARALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 999999999999999995
No 222
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.41 E-value=0.058 Score=50.80 Aligned_cols=103 Identities=13% Similarity=0.194 Sum_probs=65.2
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|-...-... ..+++..+++.+.+++|||+--|=.+-
T Consensus 32 g~iD~~~l~~lv~~l--------------i~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st 97 (304)
T 3cpr_A 32 GDIDIAAGREVAAYL--------------VDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNT 97 (304)
T ss_dssp SCBCHHHHHHHHHHH--------------HHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCH
Confidence 345666665554432 56799999998876643222222 234566666677778999876565555
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRE 329 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~ 329 (366)
.++++ |-.+|||++++-.|+++.. .++++.++++.+.+
T Consensus 98 ~~ai~la~~A~~~Gadavlv~~P~y~~~---~~~~l~~~f~~ia~ 139 (304)
T 3cpr_A 98 RTSVELAEAAASAGADGLLVVTPYYSKP---SQEGLLAHFGAIAA 139 (304)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCC---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCC---CHHHHHHHHHHHHH
Confidence 55553 3347999999999987542 45666555554443
No 223
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=95.40 E-value=0.27 Score=47.13 Aligned_cols=230 Identities=14% Similarity=0.168 Sum_probs=115.7
Q ss_pred cCCceEecccccccccCChhhHHHHHHHHHcCCce----ecCCCCCCCHHHHhcc-C---CCceEEEeee--cCCHHHHH
Q 017781 70 ISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIM----TLSSWSTSSVEEVAST-G---PGIRFFQLYV--YKDRNVVA 139 (366)
Q Consensus 70 l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~----~vs~~~~~~~e~i~~~-~---~~~~~~Qly~--~~d~~~~~ 139 (366)
+..|++||=+|..--..-+.-..+.++|+++|.-. ++=-+ ....+++... . ....+++.|. .-..+...
T Consensus 3 ~~~~~IIAEig~NHnGdle~Ak~lI~~A~~aGad~~~d~avKfQ-t~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~ 81 (350)
T 3g8r_A 3 LSKPLFIFEMANNHMGNVEHGVALIRAIRESCQGFDFDFGFKLQ-YRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQ 81 (350)
T ss_dssp --CCEEEEECTTTTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEE-ECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHH
T ss_pred CCCCEEEEEECCCccCcHHHHHHHHHHHHHhCCcccCCeeEEcc-ccchhhhcChhccCccHHHHHHHHHHhcCCHHHHH
Confidence 34799999997643222222357778999998741 21101 1223333211 0 1112233331 13567778
Q ss_pred HHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC-CHHHHH
Q 017781 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL-SWKDVK 218 (366)
Q Consensus 140 ~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~i~ 218 (366)
.+.+.+++.|...+.--.| .+.-|....+.+|. +. + ...+. .+..++
T Consensus 82 ~L~~~~~~~Gi~~~st~fD-----~~svd~l~~~~v~~-~K-----------I---------------~S~~~~N~pLL~ 129 (350)
T 3g8r_A 82 KLVAEMKANGFKAICTPFD-----EESVDLIEAHGIEI-IK-----------I---------------ASCSFTDWPLLE 129 (350)
T ss_dssp HHHHHHHHTTCEEEEEECS-----HHHHHHHHHTTCCE-EE-----------E---------------CSSSTTCHHHHH
T ss_pred HHHHHHHHcCCcEEeccCC-----HHHHHHHHHcCCCE-EE-----------E---------------CcccccCHHHHH
Confidence 8888899999877643222 22223333332221 00 0 11222 456677
Q ss_pred HHHHhcCCCEEEEec-cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEec---CCC
Q 017781 219 WLQTITKLPILVKGV-LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG---GVR 286 (366)
Q Consensus 219 ~lr~~~~~pv~vK~v-~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~G---GI~ 286 (366)
.+-+ +++||++|.. .+.++ .+.|.+.+.+....++.-...-..+.+++.+++..+ .+||-.++ |-.
T Consensus 130 ~va~-~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp-~lpVG~SdHt~g~~ 207 (350)
T 3g8r_A 130 RIAR-SDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYA-GVRIGYSTHEDPDL 207 (350)
T ss_dssp HHHT-SCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCT-TSEEEEEECCCSSC
T ss_pred HHHh-hCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCC-CCCEEcCCCCCCCc
Confidence 7765 6899999955 56666 456777555533222111011123456777766552 48887662 111
Q ss_pred CHHHHHHHHHhCcCEEEecHHHHHHh--hhc-----CHHHHHHHHHHHHHHHHHHHHHcCCC
Q 017781 287 RGTDVFKALALGASGIFIGRPVVYSL--AAE-----GEKGVRRVLEMLREEFELAMALSGCR 341 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~igr~~l~~l--~~~-----G~~gv~~~~~~l~~el~~~m~~~G~~ 341 (366)
. .-+..|+++||+ +|=+-|--.- ... -++. +..|.++++..-..+|..
T Consensus 208 ~-~~~~AAvAlGA~--vIEkH~tldr~~g~D~~~Sl~P~e----f~~lv~~ir~i~~alG~~ 262 (350)
T 3g8r_A 208 M-EPIMLAVAQGAT--VFEKHVGLPTDQYGINNYSANPEQ----VRRWLAAAARALAMLGDG 262 (350)
T ss_dssp C-HHHHHHHHTTCC--EEEEEBCCCBTTBCCCTTCBCHHH----HHHHHHHHHHHHHHHCCT
T ss_pred c-HHHHHHHHcCCC--EEEEecCcccCCCCcccccCCHHH----HHHHHHHHHHHHHHcCCC
Confidence 2 234578999997 4444332111 011 2333 445556666666677753
No 224
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.38 E-value=0.084 Score=50.95 Aligned_cols=61 Identities=20% Similarity=0.050 Sum_probs=47.5
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.++|+|.|+++...|. ....++.+..+++..+ ++||++ |+|.+.+++.++..+|||+|.+|
T Consensus 109 ~~aGvdvI~id~a~G~----~~~~~e~I~~ir~~~~-~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 109 RDAGADFFCVDVAHAH----AKYVGKTLKSLRQLLG-SRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHTTCCEEEEECSCCS----SHHHHHHHHHHHHHHT-TCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHcCCCEEEEeCCCCC----cHhHHHHHHHHHHhcC-CCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 8999999998643232 2234667888877653 688887 67999999999999999999985
No 225
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.36 E-value=0.23 Score=44.36 Aligned_cols=84 Identities=19% Similarity=0.174 Sum_probs=54.6
Q ss_pred HHHHHHHHhcCCCEEE--E-e-------c-cCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 215 KDVKWLQTITKLPILV--K-G-------V-LTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~v--K-~-------v-~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
+.++.+|+.+++|++- | . + ...+. .++|+|.|.++..-....+ +....+.+..+++..+ .+++
T Consensus 59 ~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~-~~~~~~~i~~i~~~~~-~~~v 136 (234)
T 1yxy_A 59 RDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHD-GLDIASFIRQVKEKYP-NQLL 136 (234)
T ss_dssp HHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTT-CCCHHHHHHHHHHHCT-TCEE
T ss_pred HHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCCC-CccHHHHHHHHHHhCC-CCeE
Confidence 4567777777888741 1 1 1 12222 7899999988664211111 1134567777777663 4565
Q ss_pred EEecCCCCHHHHHHHHHhCcCEE
Q 017781 280 FLDGGVRRGTDVFKALALGASGI 302 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalGAd~V 302 (366)
++ ++++.+++.++..+|||.|
T Consensus 137 ~~--~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 137 MA--DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp EE--ECSSHHHHHHHHHTTCSEE
T ss_pred EE--eCCCHHHHHHHHHcCCCEE
Confidence 54 6899999999999999999
No 226
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=95.31 E-value=0.48 Score=45.89 Aligned_cols=114 Identities=12% Similarity=0.082 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 213 (366)
+.+.+.+.++++.+.|++++-+.++.+ +....
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~~~~~ 176 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHR------------------------------------------------DFDRD 176 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCS------------------------------------------------SHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCC------------------------------------------------CHHHH
Confidence 677777788888889999998765431 01123
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHH--------HH--cCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LTAED--------VQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~--aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
.+.++.+|+.+ +.+|.+..- .+.++ .+ .++++|- +. ..+..++.+.++++.++ ++||
T Consensus 177 ~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iE-------qP-~~~~~~~~~~~l~~~~~-~iPI 247 (389)
T 2oz8_A 177 LRRLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVE-------DP-ILRHDHDGLRTLRHAVT-WTQI 247 (389)
T ss_dssp HHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEE-------SC-BCTTCHHHHHHHHHHCC-SSEE
T ss_pred HHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEe-------CC-CCCcCHHHHHHHHhhCC-CCCE
Confidence 45567777766 466666632 34443 45 4555552 11 12236778888887763 5999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
++++.+ +..|+.+++..| +|.|++.
T Consensus 248 a~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 248 NSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp EECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred EeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 999999 999999999988 8999996
No 227
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=95.30 E-value=0.18 Score=46.14 Aligned_cols=122 Identities=14% Similarity=0.194 Sum_probs=76.8
Q ss_pred eecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccC
Q 017781 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (366)
Q Consensus 130 y~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (366)
|...+.+.+.+-++.++++|++++++.+-.+ |
T Consensus 67 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~------------------------------------------------d 98 (256)
T 1twd_A 67 YSDGEFAAILEDVRTVRELGFPGLVTGVLDV------------------------------------------------D 98 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCT------------------------------------------------T
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECC------------------------------------------------C
Confidence 5444667788888999999999999854322 2
Q ss_pred CCCCHHHHHHHHHhc-CCCEEEEec----cCHHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 210 RSLSWKDVKWLQTIT-KLPILVKGV----LTAED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~-~~pv~vK~v----~~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
...+.+.++++.+.. +.|+.+=-. .++.+ .+.|+|.|--|+... .....++.|.++.+... ++.|
T Consensus 99 g~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG~~~----~a~~g~~~L~~Lv~~a~-~i~I 173 (256)
T 1twd_A 99 GNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKS----DALQGLSKIMELIAHRD-APII 173 (256)
T ss_dssp SSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSS----STTTTHHHHHHHHTSSS-CCEE
T ss_pred CCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCC----CHHHHHHHHHHHHHhhC-CcEE
Confidence 234555555555544 345444321 12222 778999997655321 22334556666665444 7889
Q ss_pred EEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 280 FLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
++-|||+. +.+.+-+..|++.+-.+
T Consensus 174 m~GgGv~~-~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 174 MAGAGVRA-ENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp EEESSCCT-TTHHHHHHHTCSEEEEC
T ss_pred EecCCcCH-HHHHHHHHcCCCeEeEC
Confidence 99999963 45555557899988865
No 228
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.29 E-value=0.045 Score=51.16 Aligned_cols=103 Identities=17% Similarity=0.344 Sum_probs=66.1
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+-
T Consensus 17 g~iD~~~l~~lv~~l--------------i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t 82 (291)
T 3tak_A 17 GGVDWKSLEKLVEWH--------------IEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANST 82 (291)
T ss_dssp SCBCHHHHHHHHHHH--------------HHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSH
T ss_pred CCcCHHHHHHHHHHH--------------HHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCH
Confidence 456676666555432 56899999998876642211111 234556666667778999986665566
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRE 329 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~ 329 (366)
.++++ |-.+|||++++-.|+++.. .++++.++++.+.+
T Consensus 83 ~~ai~la~~a~~~Gadavlv~~P~y~~~---~~~~l~~~f~~ia~ 124 (291)
T 3tak_A 83 REAIELTKAAKDLGADAALLVTPYYNKP---TQEGLYQHYKAIAE 124 (291)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCC---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCC---CHHHHHHHHHHHHH
Confidence 66654 4458999999999987642 45666555554443
No 229
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=95.28 E-value=0.25 Score=47.43 Aligned_cols=265 Identities=18% Similarity=0.192 Sum_probs=135.6
Q ss_pred hhcCCccchhhH-HHhHhcccceeeeccccC-------CCCCCccceeEcCccc--CCceEecccccccccCChhhHHHH
Q 017781 25 YYASGAEDQWTL-QENRNAFSRILFRPRILI-------DVSKIDMNTTVLGFKI--SMPIMIAPTAMQKMAHPEGEYATA 94 (366)
Q Consensus 25 y~~~ga~~~~t~-~~N~~~f~~i~l~pr~l~-------~~~~vd~st~l~g~~l--~~Pi~iApm~~~~l~~~~~e~~la 94 (366)
.+-|-.||+..+ ....+++..+.=+-|+.. ....-|+..++.+..+ ..|++||=.+. ....+.-..+|
T Consensus 49 ~~ig~~g~~~~~~~~~~~~~~~v~~~~~i~~~~k~~sr~~~~~~~~i~i~~~~iG~~~~~vIAgpcs--~es~e~a~~~a 126 (350)
T 1vr6_A 49 TVIGIIGDDRYVVADKFESLDCVESVVRVLKPYKLVSREFHPEDTVIDLGDVKIGNGYFTIIAGPCS--VEGREMLMETA 126 (350)
T ss_dssp EEEEEEEEESSCCHHHHHTSTTEEEEEECSCSCCTTBTTTCCSCCCEECSSCEESTTEEEEEEECSB--CCCHHHHHHHH
T ss_pred EEEEEECCcCcCCHHHhhCCccceeeccCCCChhhhhhhcCCcCCEEEECCEEECCCCeEEEEeCCC--cCCHHHHHHHH
Confidence 344555776655 345556655554444432 2234455555554333 13777765432 22233346899
Q ss_pred HHHHHcCCceec-CCCCCCCHHHHhccCCCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhc
Q 017781 95 RAASAAGTIMTL-SSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRF 173 (366)
Q Consensus 95 ~aa~~~G~~~~v-s~~~~~~~e~i~~~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~ 173 (366)
+.+++.|.-++- ..+.+.+ . ++.||- ...+....+.+.+++.|...+.==.| + ..-++...+
T Consensus 127 ~~~k~aGa~~vr~q~fKprT-------s--~~~f~g---lg~egl~~l~~~~~e~Gl~~~te~~d-~----~~~~~l~~~ 189 (350)
T 1vr6_A 127 HFLSELGVKVLRGGAYKPRT-------S--PYSFQG---LGEKGLEYLREAADKYGMYVVTEALG-E----DDLPKVAEY 189 (350)
T ss_dssp HHHHHTTCCEEECBSCCCCC-------S--TTSCCC---CTHHHHHHHHHHHHHHTCEEEEECSS-G----GGHHHHHHH
T ss_pred HHHHHcCCCeeeeeEEeCCC-------C--hHhhcC---CCHHHHHHHHHHHHHcCCcEEEEeCC-H----HHHHHHHHh
Confidence 999999988763 2333222 1 222331 13455555666667788766531111 1 111111111
Q ss_pred CCCCccccccccccccCCCccccchhhHHHhhhccCCC-CCHHHHHHHHHhcCCCEEEEecc--CHHH--------HHcC
Q 017781 174 TLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS-LSWKDVKWLQTITKLPILVKGVL--TAED--------VQAG 242 (366)
Q Consensus 174 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~i~~lr~~~~~pv~vK~v~--~~~d--------~~aG 242 (366)
++- +. .+... .+...++++-+ +++||++|..+ +.++ ...|
T Consensus 190 -vd~--------------------------lk-IgAr~~~n~~LL~~va~-~~kPVilk~G~~~tl~ei~~Ave~i~~~G 240 (350)
T 1vr6_A 190 -ADI--------------------------IQ-IGARNAQNFRLLSKAGS-YNKPVLLKRGFMNTIEEFLLSAEYIANSG 240 (350)
T ss_dssp -CSE--------------------------EE-ECGGGTTCHHHHHHHHT-TCSCEEEECCTTCCHHHHHHHHHHHHHTT
T ss_pred -CCE--------------------------EE-ECcccccCHHHHHHHHc-cCCcEEEcCCCCCCHHHHHHHHHHHHHCC
Confidence 000 00 00111 13445666664 68999999664 6665 6778
Q ss_pred CcEEEEcCCCccCCCC---CcchHHHHHHHHHHcCCCceEEEec----CCCC--HHHHHHHHHhCcCEEEecHHHHHHhh
Q 017781 243 AAGIIVSNHGARQLDY---VPATIMALEEVVKATQGRIPVFLDG----GVRR--GTDVFKALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 243 ad~I~vs~~gg~~~~~---~~~~~~~l~~i~~~~~~~i~vi~~G----GI~~--~~dv~kalalGAd~V~igr~~l~~l~ 313 (366)
.+-+++.-||.+.... ....+..++.+++.. .+||+++. |-+. ..-...|+++||++++|-+-+--.-+
T Consensus 241 N~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~--~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~a 318 (350)
T 1vr6_A 241 NTKIILCERGIRTFEKATRNTLDISAVPIIRKES--HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKA 318 (350)
T ss_dssp CCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGC
T ss_pred CCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhh--CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCcccC
Confidence 7666665566543311 122455666666655 68998844 4433 34455678899999999986532111
Q ss_pred -hcCHHHH-HHHHHHHHHHHHHHHHHcC
Q 017781 314 -AEGEKGV-RRVLEMLREEFELAMALSG 339 (366)
Q Consensus 314 -~~G~~gv-~~~~~~l~~el~~~m~~~G 339 (366)
+.|+..+ -+-+..|.++++..-..+|
T Consensus 319 l~D~~~sL~p~e~~~lv~~ir~i~~alg 346 (350)
T 1vr6_A 319 LSDGKQSLDFELFKELVQEMKKLADALG 346 (350)
T ss_dssp SSCGGGCBCHHHHHHHHHHHHHHHHHHT
T ss_pred CCchhhcCCHHHHHHHHHHHHHHHHHhC
Confidence 1332110 1123455555565555555
No 230
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=95.26 E-value=0.21 Score=48.40 Aligned_cols=84 Identities=15% Similarity=0.153 Sum_probs=62.9
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- +. ..+..++.+.++++.+ .+||+
T Consensus 180 d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa 249 (383)
T 3i4k_A 180 DTRRVAELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGVELFE-------QP-TPADDLETLREITRRT--NVSVM 249 (383)
T ss_dssp HHHHHHHHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEE-------SC-SCTTCHHHHHHHHHHH--CCEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CChhhHHHHHHHHhhC--CCCEE
Confidence 456678888876 467877743 34444 667888885 11 1223577788888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++-+.+..|+.+++..| +|.|++--
T Consensus 250 ~dE~~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 250 ADESVWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp ESTTCSSHHHHHHHHHHTCCSEEEECT
T ss_pred ecCccCCHHHHHHHHHcCCCCEEEEcc
Confidence 999999999999999988 89999864
No 231
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.26 E-value=0.051 Score=50.89 Aligned_cols=103 Identities=10% Similarity=0.148 Sum_probs=65.9
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHH-cCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQ-AGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~-aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
...+++.++++.+.. .+ .|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+
T Consensus 19 g~iD~~~l~~lv~~l--------------i~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~ 84 (293)
T 1f6k_A 19 GTINEKGLRQIIRHN--------------IDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVN 84 (293)
T ss_dssp SCBCHHHHHHHHHHH--------------HHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSC
T ss_pred CCcCHHHHHHHHHHH--------------HhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCC
Confidence 456676666555432 56 799999998876643211221 23456666667777899987666656
Q ss_pred HHHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHH
Q 017781 288 GTDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRE 329 (366)
Q Consensus 288 ~~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~ 329 (366)
-.++++ |-.+|||++++-.|+++.. .++++.++++.+.+
T Consensus 85 t~~ai~la~~a~~~Gadavlv~~P~y~~~---~~~~l~~~f~~va~ 127 (293)
T 1f6k_A 85 LKEAVELGKYATELGYDCLSAVTPFYYKF---SFPEIKHYYDTIIA 127 (293)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCC---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCC---CHHHHHHHHHHHHH
Confidence 666553 3347999999999987642 35666655555443
No 232
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=95.24 E-value=0.11 Score=50.70 Aligned_cols=115 Identities=16% Similarity=0.209 Sum_probs=81.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+.+.+.+.++++.+.|++++-+.+... ...
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~-------------------------------------------------~~~ 174 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGGP-------------------------------------------------LKA 174 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCSC-------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccCC-------------------------------------------------HHH
Confidence 4677777778888888999987755310 112
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +.+|.+..- .+.++ .+.|++.|- +. ..+..++.+.++++.+ ++||+
T Consensus 175 ~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~iPIa 244 (397)
T 2qde_A 175 DIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNLSKIE-------QP-LPAWDLDGMARLRGKV--ATPIY 244 (397)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEE-------CC-SCTTCHHHHHHHHTTC--SSCEE
T ss_pred HHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCCCEEE-------CC-CChhhHHHHHHHHhhC--CCCEE
Confidence 345677777775 477777732 34444 566777764 11 1233677788888766 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++.+.+..++.+++..| +|.|++--
T Consensus 245 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 271 (397)
T 2qde_A 245 ADESAQELHDLLAIINKGAADGLMIKT 271 (397)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred EeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 999999999999999987 89999854
No 233
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=95.22 E-value=0.085 Score=51.03 Aligned_cols=117 Identities=9% Similarity=0.059 Sum_probs=83.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 213 (366)
+++.+.+.++++.+.|++++-+.++++. .++..+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~g----------------------------------------------~~~~~d 179 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVMG----------------------------------------------DDPDTD 179 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTTT----------------------------------------------SCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCC----------------------------------------------CCHHHH
Confidence 3366777788888889999988765321 011224
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cC-HHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LT-AED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~-~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
.+.++.+|+.+ +.+|.+..- .+ .++ .+.|+++|- +. ..+..++.+.++++.+ .+||+
T Consensus 180 ~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~iPIa 249 (374)
T 3sjn_A 180 YAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWIE-------EP-VLADSLISYEKLSRQV--SQKIA 249 (374)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEEE-------CS-SCTTCHHHHHHHHHHC--SSEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCceEEE-------CC-CCcccHHHHHHHHhhC--CCCEE
Confidence 56678888876 567888743 35 554 567888774 11 1223577888888887 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++-+.+..|+.++++.| +|.|++--
T Consensus 250 ~dE~~~~~~~~~~~l~~~~~d~v~~k~ 276 (374)
T 3sjn_A 250 GGESLTTRYEFQEFITKSNADIVQPDI 276 (374)
T ss_dssp ECTTCCHHHHHHHHHHHHCCSEECCBT
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999999976 79998753
No 234
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=95.21 E-value=0.42 Score=46.00 Aligned_cols=114 Identities=17% Similarity=0.168 Sum_probs=80.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++-+.+.++ +...
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~------------------------------------------------~~~~ 175 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGGS------------------------------------------------DPAQ 175 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSS------------------------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCCC------------------------------------------------ChHH
Confidence 5777777888888889999998766532 0112
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH-------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED-------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d-------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
..+.++.+|+.+ +.++.++.- .+.++ .+.|+ +|- +. -+ .++.+.++++.+ ++||++
T Consensus 176 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~i-~iE-------qP--~~-d~~~~~~l~~~~--~iPI~~ 242 (378)
T 2qdd_A 176 DIARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVRARD-WIE-------QP--CQ-TLDQCAHVARRV--ANPIML 242 (378)
T ss_dssp HHHHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCCCCC-EEE-------CC--SS-SHHHHHHHHTTC--CSCEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhCCCc-EEE-------cC--CC-CHHHHHHHHHhC--CCCEEE
Confidence 345677777776 467777743 34554 11455 442 11 11 677888888766 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
++-+.+..|+.+++..| +|.|++-..
T Consensus 243 dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (378)
T 2qdd_A 243 DECLHEFSDHLAAWSRGACEGVKIKPN 269 (378)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCCcCCHHHHHHHHHhCCCCEEEeccc
Confidence 99999999999999987 899999654
No 235
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.19 E-value=0.055 Score=50.79 Aligned_cols=103 Identities=18% Similarity=0.291 Sum_probs=65.8
Q ss_pred CCCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 209 DRSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 209 d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
|...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+
T Consensus 22 dg~iD~~~l~~lv~~l--------------i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~ 87 (297)
T 3flu_A 22 DGSIHYEQLRDLIDWH--------------IENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANN 87 (297)
T ss_dssp TSCBCHHHHHHHHHHH--------------HHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred CCCcCHHHHHHHHHHH--------------HHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcC
Confidence 3456676666655532 56899999998876643221222 23455666667777899998656556
Q ss_pred HHHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHH
Q 017781 288 GTDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLR 328 (366)
Q Consensus 288 ~~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~ 328 (366)
-.++++ |-.+|||++++-.|+++.. .++++.++++.+.
T Consensus 88 t~~ai~la~~a~~~Gadavlv~~P~y~~~---~~~~l~~~f~~va 129 (297)
T 3flu_A 88 TVEAIALSQAAEKAGADYTLSVVPYYNKP---SQEGIYQHFKTIA 129 (297)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCC---CHHHHHHHHHHHH
Confidence 666553 3358999999999987642 3566555555443
No 236
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.18 E-value=0.06 Score=48.50 Aligned_cols=76 Identities=21% Similarity=0.243 Sum_probs=51.3
Q ss_pred HHHHHHHHHhcC-CCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 214 WKDVKWLQTITK-LPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 214 ~~~i~~lr~~~~-~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
.+.++.+++.++ +-+....+.+.++ .++|||+|+..+ ...+.+..+++ . .++++. |+.|+
T Consensus 56 ~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~----------~d~~v~~~ar~-~--g~~~i~--Gv~t~ 120 (224)
T 1vhc_A 56 ADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPG----------LNPKIVKLCQD-L--NFPITP--GVNNP 120 (224)
T ss_dssp HHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSS----------CCHHHHHHHHH-T--TCCEEC--EECSH
T ss_pred HHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECC----------CCHHHHHHHHH-h--CCCEEe--ccCCH
Confidence 456888888874 2222233345554 999999995321 23344444444 4 456655 49999
Q ss_pred HHHHHHHHhCcCEEEe
Q 017781 289 TDVFKALALGASGIFI 304 (366)
Q Consensus 289 ~dv~kalalGAd~V~i 304 (366)
+++.+|+.+|||.|.+
T Consensus 121 ~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 121 MAIEIALEMGISAVKF 136 (224)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEE
Confidence 9999999999999998
No 237
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.18 E-value=0.053 Score=51.01 Aligned_cols=102 Identities=14% Similarity=0.295 Sum_probs=64.2
Q ss_pred CCCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 209 DRSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 209 d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
|...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+
T Consensus 27 dg~iD~~~l~~lv~~l--------------i~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~ 92 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYL--------------IDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNN 92 (301)
T ss_dssp TSSBCHHHHHHHHHHH--------------HHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSC
T ss_pred CCCcCHHHHHHHHHHH--------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCC
Confidence 3456777666655532 56799999998876643211221 23455666666777899887656555
Q ss_pred HHHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHH
Q 017781 288 GTDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEML 327 (366)
Q Consensus 288 ~~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l 327 (366)
-.++++ |-.+|||++++-.|+++.. .++++.++++.+
T Consensus 93 t~~ai~la~~A~~~Gadavlv~~P~y~~~---s~~~l~~~f~~v 133 (301)
T 1xky_A 93 THASIDLTKKATEVGVDAVMLVAPYYNKP---SQEGMYQHFKAI 133 (301)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSCC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCCCC---CHHHHHHHHHHH
Confidence 555543 3348999999999987642 455555555444
No 238
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=95.17 E-value=0.52 Score=43.66 Aligned_cols=201 Identities=21% Similarity=0.288 Sum_probs=105.8
Q ss_pred CCccceeEcCccc--CCceEecccccccccCChhhHHHHHHHHHcCCceec-CCCCCCCHHHHhccCCCceEEEeeecCC
Q 017781 58 KIDMNTTVLGFKI--SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWSTSSVEEVASTGPGIRFFQLYVYKD 134 (366)
Q Consensus 58 ~vd~st~l~g~~l--~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v-s~~~~~~~e~i~~~~~~~~~~Qly~~~d 134 (366)
.-++..++.+..+ ..|++||=.+ .....+.-..+++.+++.|.-.+- ..+.+.+ . ++.||- ..
T Consensus 22 ~~~~~i~i~~~~iG~~~~~vIAgpc--~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprt-------s--~~~f~g---~g 87 (276)
T 1vs1_A 22 RRETVVEVEGVRIGGGSKAVIAGPC--SVESWEQVREAALAVKEAGAHMLRGGAFKPRT-------S--PYSFQG---LG 87 (276)
T ss_dssp CSCCCEEETTEEEBTTBCEEEEECS--BCCCHHHHHHHHHHHHHHTCSEEECBSSCCCS-------S--TTSCCC---CT
T ss_pred CCCcEEEECCEEECCCCeEEEEecC--CCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCC-------C--hhhhcC---CC
Confidence 3445555544332 1377777553 222233345889999999988763 2332222 1 112331 13
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC-CC
Q 017781 135 RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS-LS 213 (366)
Q Consensus 135 ~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~ 213 (366)
.+....+.+.+++.|...+.==.| + ..-+....+ ++- +. .+... .+
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d-~----~~~~~l~~~-vd~--------------------------~k-Igs~~~~n 134 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLD-P----RHVETVSRY-ADM--------------------------LQ-IGARNMQN 134 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCC-G----GGHHHHHHH-CSE--------------------------EE-ECGGGTTC
T ss_pred HHHHHHHHHHHHHcCCcEEEecCC-H----HHHHHHHHh-CCe--------------------------EE-ECcccccC
Confidence 455566666677788776532111 1 111111111 000 00 00011 13
Q ss_pred HHHHHHHHHhcCCCEEEEecc--CHHH--------HHcCCcEEEEcCCCccCCC---CCcchHHHHHHHHHHcCCCceEE
Q 017781 214 WKDVKWLQTITKLPILVKGVL--TAED--------VQAGAAGIIVSNHGARQLD---YVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~vK~v~--~~~d--------~~aGad~I~vs~~gg~~~~---~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
...++.+-+ +++||++|..+ +.++ ...|.+-+++--+|.+... .....+..++.+++.. .+||+
T Consensus 135 ~~ll~~~a~-~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~--~lpVi 211 (276)
T 1vs1_A 135 FPLLREVGR-SGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEAT--HLPVI 211 (276)
T ss_dssp HHHHHHHHH-HTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHB--SSCEE
T ss_pred HHHHHHHHc-cCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHh--CCCEE
Confidence 445666554 58999999664 6665 6678744544333443321 1223566677777765 68987
Q ss_pred Eec----CCCC--HHHHHHHHHhCcCEEEecHHH
Q 017781 281 LDG----GVRR--GTDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 281 ~~G----GI~~--~~dv~kalalGAd~V~igr~~ 308 (366)
++. |.+. ..-...|+++||++++|=+-+
T Consensus 212 ~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 212 VDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp ECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred EeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 753 4443 344556788999999999865
No 239
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=95.16 E-value=0.18 Score=48.23 Aligned_cols=116 Identities=17% Similarity=0.176 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++-+.+++.. ..
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~~~-------------------------------------------------~~ 168 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGTGI-------------------------------------------------EA 168 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSCH-------------------------------------------------HH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCCH-------------------------------------------------HH
Confidence 56777777777777889999877654320 11
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- + ...+..++.+.++++.+ .+||+
T Consensus 169 d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa 238 (354)
T 3jva_A 169 DIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQIELVE-------Q-PVKRRDLEGLKYVTSQV--NTTIM 238 (354)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCEEEEE-------C-CSCTTCHHHHHHHHHHC--SSEEE
T ss_pred HHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCChhhHHHHHHHHHhC--CCCEE
Confidence 345566777765 456666632 34443 445666664 1 11223577788888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
+++.+.+..|+.+++..| +|.|++--.
T Consensus 239 ~dE~~~~~~~~~~~l~~~~~d~v~~k~~ 266 (354)
T 3jva_A 239 ADESCFDAQDALELVKKGTVDVINIKLM 266 (354)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred EcCCcCCHHHHHHHHHcCCCCEEEECch
Confidence 999999999999999987 799999754
No 240
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=95.14 E-value=0.29 Score=47.35 Aligned_cols=115 Identities=14% Similarity=0.062 Sum_probs=78.9
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
..+++.+.+.++++.+.|++++-+.+++. +.
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~iKiK~G~~-------------------------------------------------~~ 173 (378)
T 3eez_A 143 AKSVEETRAVIDRYRQRGYVAHSVKIGGD-------------------------------------------------VE 173 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCSC-------------------------------------------------HH
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEeccCCC-------------------------------------------------HH
Confidence 35778788888888889999988776531 01
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
.+.+.++.+|+.+ +.+|.++.- .+.++ .+.|+ +|- + ..+.++.+.++++.+ .+||
T Consensus 174 ~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------q---P~~~~~~~~~l~~~~--~iPI 240 (378)
T 3eez_A 174 RDIARIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV-MFE-------Q---PGETLDDIAAIRPLH--SAPV 240 (378)
T ss_dssp HHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC-CEE-------C---CSSSHHHHHHTGGGC--CCCE
T ss_pred HHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe-EEe-------c---CCCCHHHHHHHHhhC--CCCE
Confidence 1334566666665 456666632 23333 44555 442 1 112567777777666 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecHHH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGRPV 308 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr~~ 308 (366)
++++.+.+..|+.+++..| +|.|++....
T Consensus 241 a~dE~~~~~~~~~~~l~~~~~d~v~ik~~~ 270 (378)
T 3eez_A 241 SVDECLVTLQDAARVARDGLAEVFGIKLNR 270 (378)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred EECCCCCCHHHHHHHHHcCCCCEEEeCchh
Confidence 9999999999999999987 8999998654
No 241
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.13 E-value=0.042 Score=52.05 Aligned_cols=102 Identities=14% Similarity=0.202 Sum_probs=65.5
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.+..|....-... ..+++..+++.+.+++|||+--|=.+-
T Consensus 38 g~iD~~~l~~li~~l--------------i~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st 103 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQ--------------ITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNST 103 (315)
T ss_dssp SCBCHHHHHHHHHHH--------------HHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCH
Confidence 445666666555432 56899999988876632211111 234566666677778999886666666
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLR 328 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~ 328 (366)
.++++ |-.+|||++++-.|+++.. .++++.++++.+.
T Consensus 104 ~~ai~la~~A~~~Gadavlv~~P~y~~~---~~~~l~~~f~~va 144 (315)
T 3si9_A 104 SEAVELAKHAEKAGADAVLVVTPYYNRP---NQRGLYTHFSSIA 144 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCC---CHHHHHHHHHHHH
Confidence 66653 4458999999999987642 4566555555443
No 242
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.12 E-value=0.064 Score=50.46 Aligned_cols=106 Identities=15% Similarity=0.199 Sum_probs=67.8
Q ss_pred CCCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 209 DRSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 209 d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
|..++++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+
T Consensus 26 dg~iD~~~l~~lv~~l--------------i~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~ 91 (303)
T 2wkj_A 26 QQALDKASLRRLVQFN--------------IQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVS 91 (303)
T ss_dssp TSSBCHHHHHHHHHHH--------------HHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSS
T ss_pred CCCcCHHHHHHHHHHH--------------HHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 3456777666655532 56799999998876643211221 23455666666777899987555545
Q ss_pred HHHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 017781 288 GTDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 331 (366)
Q Consensus 288 ~~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el 331 (366)
-.++++ |-.+|||++++-.|+++.. .++++.++++.+.+..
T Consensus 92 t~~ai~la~~A~~~Gadavlv~~P~y~~~---s~~~l~~~f~~va~a~ 136 (303)
T 2wkj_A 92 TAESQQLAASAKRYGFDAVSAVTPFYYPF---SFEEHCDHYRAIIDSA 136 (303)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCCSSCC---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEecCCCCCCC---CHHHHHHHHHHHHHhC
Confidence 555543 3347999999999987642 5677766666665543
No 243
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.10 E-value=0.062 Score=50.15 Aligned_cols=87 Identities=18% Similarity=0.332 Sum_probs=55.9
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHH----HHHhCcCEEEecHHHHHHhh
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~k----alalGAd~V~igr~~l~~l~ 313 (366)
.+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+-.++++ |-.+|||++++-.|+++..
T Consensus 31 i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~- 109 (289)
T 2yxg_A 31 IENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKP- 109 (289)
T ss_dssp HHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC-
T ss_pred HHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-
Confidence 56799999998876643211221 23455666666777899887655555555543 3347999999999987642
Q ss_pred hcCHHHHHHHHHHHH
Q 017781 314 AEGEKGVRRVLEMLR 328 (366)
Q Consensus 314 ~~G~~gv~~~~~~l~ 328 (366)
.++++.++++.+.
T Consensus 110 --s~~~l~~~f~~ia 122 (289)
T 2yxg_A 110 --TQEGLRKHFGKVA 122 (289)
T ss_dssp --CHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHH
Confidence 4566555554443
No 244
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.09 E-value=0.059 Score=50.43 Aligned_cols=87 Identities=21% Similarity=0.283 Sum_probs=55.8
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHH----HHHhCcCEEEecHHHHHHhh
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~k----alalGAd~V~igr~~l~~l~ 313 (366)
.+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+-.++++ |-.+|||++++-.|+++..
T Consensus 31 i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~- 109 (294)
T 2ehh_A 31 VDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKP- 109 (294)
T ss_dssp HTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-
T ss_pred HHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-
Confidence 46799999998876643211221 23456666666777899987666555555543 3348999999999987642
Q ss_pred hcCHHHHHHHHHHHH
Q 017781 314 AEGEKGVRRVLEMLR 328 (366)
Q Consensus 314 ~~G~~gv~~~~~~l~ 328 (366)
.++++.++++.+.
T Consensus 110 --s~~~l~~~f~~va 122 (294)
T 2ehh_A 110 --TQRGLYEHFKTVA 122 (294)
T ss_dssp --CHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHH
Confidence 4555555544443
No 245
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.03 E-value=0.059 Score=51.44 Aligned_cols=103 Identities=13% Similarity=0.088 Sum_probs=64.3
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
..++++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+-
T Consensus 50 g~iD~~~l~~lv~~l--------------i~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st 115 (332)
T 2r8w_A 50 GRVDIEAFSALIARL--------------DAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRT 115 (332)
T ss_dssp CCBCHHHHHHHHHHH--------------HHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCH
Confidence 456666665555432 56799999998876643211211 234566666677778999875554455
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRE 329 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~ 329 (366)
.++++ |-.+|||+|++-.|+++.. .++++.++++.+.+
T Consensus 116 ~eai~la~~A~~~Gadavlv~~P~Y~~~---s~~~l~~~f~~VA~ 157 (332)
T 2r8w_A 116 DEAVALAKDAEAAGADALLLAPVSYTPL---TQEEAYHHFAAVAG 157 (332)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCSSCC---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCC---CHHHHHHHHHHHHH
Confidence 55543 3348999999999987642 45666555555443
No 246
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=95.02 E-value=0.11 Score=50.41 Aligned_cols=115 Identities=10% Similarity=0.048 Sum_probs=80.6
Q ss_pred CCH---HHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccC
Q 017781 133 KDR---NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (366)
Q Consensus 133 ~d~---~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (366)
.++ +.+.+.++++.+.|++++-+.+..+ +
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------------------------------~ 166 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGGT------------------------------------------------S 166 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSSS------------------------------------------------C
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCCC------------------------------------------------C
Confidence 456 6677777888889999987765321 1
Q ss_pred CCCCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHc-CCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCC
Q 017781 210 RSLSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR 276 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~a-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~ 276 (366)
.....+.++.+|+.+ +.++.+..- .+.++ .+. |+++|- +. ..+..++.+.++++.+ +
T Consensus 167 ~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ 236 (382)
T 2gdq_A 167 FKEDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWLE-------EP-LPFDQPQDYAMLRSRL--S 236 (382)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEEE-------CC-SCSSCHHHHHHHHTTC--S
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCCeEEE-------CC-CCcccHHHHHHHHhhC--C
Confidence 112446677888776 577777743 35554 445 666663 11 1234677788888776 7
Q ss_pred ceEEEecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 277 IPVFLDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 277 i~vi~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
+||++++.+.+..++.+++..| +|.|++-
T Consensus 237 iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 266 (382)
T 2gdq_A 237 VPVAGGENMKGPAQYVPLLSQRCLDIIQPD 266 (382)
T ss_dssp SCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred CCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999999987 8999884
No 247
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=95.01 E-value=0.19 Score=49.37 Aligned_cols=124 Identities=9% Similarity=0.026 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++-+.+++... + + . .+...
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~-----d------------------------------g-~------~~~~~ 215 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPK-----D------------------------------G-M------PGMRE 215 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGG-----G------------------------------H-H------HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcc-----c------------------------------c-c------chHHH
Confidence 577888888888888999999887654210 0 0 0 01123
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ .+||+
T Consensus 216 die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa 285 (412)
T 3stp_A 216 NLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEPRWLEE--------PVIADDVAGYAELNAMN--IVPIS 285 (412)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhCC--CCCEE
Confidence 556788899887 578888843 45554 6678888841 11233677888888876 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecHHH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGRPV 308 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr~~ 308 (366)
+++-+.+..|+.+++..| +|.|++--..
T Consensus 286 ~dE~~~~~~~~~~li~~~a~D~v~ik~~~ 314 (412)
T 3stp_A 286 GGEHEFSVIGCAELINRKAVSVLQYDTNR 314 (412)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred eCCCCCCHHHHHHHHHcCCCCEEecChhh
Confidence 999999999999999987 8999987544
No 248
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.00 E-value=0.056 Score=50.94 Aligned_cols=101 Identities=21% Similarity=0.284 Sum_probs=65.0
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+.-|=.+-
T Consensus 31 g~iD~~~l~~lv~~l--------------i~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t 96 (304)
T 3l21_A 31 GSLDTATAARLANHL--------------VDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDT 96 (304)
T ss_dssp SCBCHHHHHHHHHHH--------------HHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCH
Confidence 456676666555432 56799999998876643211211 234566666777778999986665666
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEML 327 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l 327 (366)
.++++ |-.+|||+|++-.|+++.. .++++.++++.+
T Consensus 97 ~~ai~la~~a~~~Gadavlv~~P~y~~~---s~~~l~~~f~~v 136 (304)
T 3l21_A 97 AHSIRLAKACAAEGAHGLLVVTPYYSKP---PQRGLQAHFTAV 136 (304)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCC---CHHHHHHHHHHH
Confidence 66653 3347999999999987642 455555544443
No 249
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=94.98 E-value=0.094 Score=48.07 Aligned_cols=65 Identities=20% Similarity=0.232 Sum_probs=51.8
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l 309 (366)
.++||++|.|-.-.+ .-....+.|..+++.+ ++||+.-++|.+..++..++++|||+|.++...+
T Consensus 75 ~~~GA~~isvlt~~~----~f~G~~~~l~~i~~~v--~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 75 ARGGARAVSVLTEPH----RFGGSLLDLKRVREAV--DLPLLRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp HHTTCSEEEEECCCS----SSCCCHHHHHHHHHHC--CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHcCCCEEEEecchh----hhccCHHHHHHHHHhc--CCCEEECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 788999998743211 0112556777788887 8999999999999999999999999999998765
No 250
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=94.97 E-value=0.046 Score=51.80 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=65.6
Q ss_pred CCCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 209 DRSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 209 d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
|...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+
T Consensus 39 dg~iD~~~l~~lv~~l--------------i~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~ 104 (315)
T 3na8_A 39 DGGLDLPALGRSIERL--------------IDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLT 104 (315)
T ss_dssp TSSBCHHHHHHHHHHH--------------HHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSS
T ss_pred CCCcCHHHHHHHHHHH--------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC
Confidence 3456666666555432 56899999998876632211111 23456666666777899988666556
Q ss_pred HHHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHH
Q 017781 288 GTDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLR 328 (366)
Q Consensus 288 ~~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~ 328 (366)
-.++++ |-.+|||++++-.|+++.. .++++.++++.+.
T Consensus 105 t~~ai~la~~A~~~Gadavlv~~P~y~~~---s~~~l~~~f~~va 146 (315)
T 3na8_A 105 TAKTVRRAQFAESLGAEAVMVLPISYWKL---NEAEVFQHYRAVG 146 (315)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSSCC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCCCC---CHHHHHHHHHHHH
Confidence 666553 4458999999999987642 4556555554443
No 251
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=94.95 E-value=0.21 Score=48.62 Aligned_cols=122 Identities=14% Similarity=0.057 Sum_probs=87.3
Q ss_pred CCHHHHHHHH-HHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 133 KDRNVVAQLV-RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 133 ~d~~~~~~~l-~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
.+++.+.+.+ +++.+.|++++=+.++.+... . ..++.
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~----------------~--------------------------~~~~~ 175 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTR----------------C--------------------------DVDIP 175 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC----------------C--------------------------SCCHH
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc----------------c--------------------------ccCHH
Confidence 4567777777 777778999998877643110 0 00122
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
.+.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|- + ...+..++.+.++++.. .+||
T Consensus 176 ~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPI 245 (393)
T 4dwd_A 176 GDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALEDLGYSWFE-------E-PVQHYHVGAMGEVAQRL--DITV 245 (393)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHHHTTCSEEE-------C-CSCTTCHHHHHHHHHHC--SSEE
T ss_pred HHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEE-------C-CCCcccHHHHHHHHhhC--CCCE
Confidence 3456788899886 578888843 45554 677888885 1 11223577888888877 7999
Q ss_pred EEecCCCCHHHHHHHHHhCcCEEEecH
Q 017781 280 FLDGGVRRGTDVFKALALGASGIFIGR 306 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalGAd~V~igr 306 (366)
+++.-+.+..|+.+++..|+|.|++--
T Consensus 246 a~dE~~~~~~~~~~~i~~~~d~v~~k~ 272 (393)
T 4dwd_A 246 SAGEQTYTLQALKDLILSGVRMVQPDI 272 (393)
T ss_dssp EBCTTCCSHHHHHHHHHHTCCEECCCT
T ss_pred EecCCcCCHHHHHHHHHcCCCEEEeCc
Confidence 999999999999999998999999853
No 252
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=94.94 E-value=0.057 Score=51.12 Aligned_cols=102 Identities=20% Similarity=0.328 Sum_probs=65.6
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.+..|....-... ..+++..+++.+.+++|||+--|=.+-
T Consensus 39 g~iD~~~l~~lv~~l--------------i~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st 104 (314)
T 3qze_A 39 GRLDWDSLAKLVDFH--------------LQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANST 104 (314)
T ss_dssp SCBCHHHHHHHHHHH--------------HHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCH
Confidence 456666666555432 56899999998876642211221 234556666677778999986666566
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLR 328 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~ 328 (366)
.++++ |-.+|||++++-.|+++.. .++++.++++.+.
T Consensus 105 ~eai~la~~A~~~Gadavlv~~P~y~~~---s~~~l~~~f~~va 145 (314)
T 3qze_A 105 REAVALTEAAKSGGADACLLVTPYYNKP---TQEGMYQHFRHIA 145 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCC---CHHHHHHHHHHHH
Confidence 66654 3358999999999987642 4566555555443
No 253
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=94.94 E-value=0.44 Score=42.77 Aligned_cols=100 Identities=19% Similarity=0.150 Sum_probs=69.9
Q ss_pred CHHHHHHHHHhc--CCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHc---CCCceEEEec
Q 017781 213 SWKDVKWLQTIT--KLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDG 283 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~i~vi~~G 283 (366)
+|+-++.++... ++++-+=.+.+.+. .++|++.|.. .-||-.+++.+....+.++++.. +.+..|++.
T Consensus 96 T~eGl~A~~~L~~~GI~vN~TliFS~~Qa~~aa~AGa~~iSp--FVgRidd~g~~G~~~v~~i~~~~~~~~~~t~vl~A- 172 (223)
T 1wx0_A 96 TEEGLKACKRLSAEGIKVNMTLIFSANQALLAARAGASYVSP--FLGRVDDISWDGGELLREIVEMIQVQDLPVKVIAA- 172 (223)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHTTCSCEEEEB-
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHCCCeEEEe--ccchHhhcCCCHHHHHHHHHHHHHHcCCCeEEeec-
Confidence 565444444332 89999999999987 8999997653 33444444545556666655543 224556665
Q ss_pred CCCCHHHHHHHHHhCcCEEEecHHHHHHhhhc
Q 017781 284 GVRRGTDVFKALALGASGIFIGRPVVYSLAAE 315 (366)
Q Consensus 284 GI~~~~dv~kalalGAd~V~igr~~l~~l~~~ 315 (366)
++|++.++.++..+|+|.+-+.-.++..+...
T Consensus 173 S~r~~~~v~~~~l~G~d~~Tip~~~l~~l~~h 204 (223)
T 1wx0_A 173 SIRHPRHVTEAALLGADIATMPHAVFKQLLKH 204 (223)
T ss_dssp CCCSHHHHHHHHHTTCSEEEECHHHHHHHTCC
T ss_pred ccCCHHHHHHHHHhCCCEEECCHHHHHHHHcC
Confidence 69999999999999999999998888876543
No 254
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=94.94 E-value=0.027 Score=50.90 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=39.0
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~-~dv~kalalGAd~V~igr~~l~ 310 (366)
.++|+|+++++.+ ..+.+.++++.++.+.++ +++||+-. .+. +++..|||.+.+||+++.
T Consensus 147 ~~~G~~GvV~~at----------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~ 207 (228)
T 3m47_A 147 VDLGVKNYVGPST----------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYL 207 (228)
T ss_dssp HHTTCCEEECCSS----------CHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHT
T ss_pred HHhCCcEEEECCC----------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhC
Confidence 6789999987542 234566777777545655 78888753 367 889999999999999753
No 255
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=94.93 E-value=0.12 Score=50.19 Aligned_cols=114 Identities=8% Similarity=0.007 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 213 (366)
+.+.+.+.++++.+.|++++-+.+..+. ....
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~------------------------------------------------~~~~ 196 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAP------------------------------------------------IEED 196 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSC------------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCC------------------------------------------------HHHH
Confidence 6677777778888899999887654310 1123
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|- +. ..+..++.+.++++.+ ++||++
T Consensus 197 ~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa~ 266 (392)
T 1tzz_A 197 RMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYE-------EV-GDPLDYALQAALAEFY--PGPMAT 266 (392)
T ss_dssp HHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE-------CC-SCTTCHHHHHHHTTTC--CSCEEE
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCeec-------CC-CChhhHHHHHHHHhhC--CCCEEE
Confidence 45667777765 466666632 34444 456777763 11 1233677777887766 799999
Q ss_pred ecCCCCHHHHHHHHHhC-----cCEEEec
Q 017781 282 DGGVRRGTDVFKALALG-----ASGIFIG 305 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-----Ad~V~ig 305 (366)
++.+.+..|+.+++..| +|.|++-
T Consensus 267 dE~~~~~~~~~~~i~~~~~~~~~d~v~ik 295 (392)
T 1tzz_A 267 GENLFSHQDARNLLRYGGMRPDRDWLQFD 295 (392)
T ss_dssp CTTCCSHHHHHHHHHHSCCCTTTCEECCC
T ss_pred CCCCCCHHHHHHHHHcCCCccCCcEEEEC
Confidence 99999999999999998 8999985
No 256
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=94.89 E-value=0.06 Score=50.53 Aligned_cols=88 Identities=17% Similarity=0.311 Sum_probs=56.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHH----HHHhCcCEEEecHHHHHHhh
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~k----alalGAd~V~igr~~l~~l~ 313 (366)
.+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+-.++++ |-.+|||++++-.|+++..
T Consensus 31 i~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~- 109 (297)
T 2rfg_A 31 IKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRP- 109 (297)
T ss_dssp HHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCC-
T ss_pred HHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-
Confidence 56799999998876633211221 23455666666777899887555545555543 3347999999999987642
Q ss_pred hcCHHHHHHHHHHHHH
Q 017781 314 AEGEKGVRRVLEMLRE 329 (366)
Q Consensus 314 ~~G~~gv~~~~~~l~~ 329 (366)
.++++.++++.+.+
T Consensus 110 --s~~~l~~~f~~va~ 123 (297)
T 2rfg_A 110 --SQEGLYQHFKMVHD 123 (297)
T ss_dssp --CHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHH
Confidence 45666655555443
No 257
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=94.88 E-value=0.06 Score=50.40 Aligned_cols=105 Identities=12% Similarity=0.122 Sum_probs=66.5
Q ss_pred CCCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 209 DRSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 209 d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
|...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+
T Consensus 18 dg~iD~~~l~~lv~~l--------------i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 83 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRC--------------LSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDS 83 (294)
T ss_dssp TSSBCHHHHHHHHHHH--------------HHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSS
T ss_pred CCCcCHHHHHHHHHHH--------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcc
Confidence 3456676666555432 56799999998876643211221 23455556666667899887555555
Q ss_pred HHHHHH----HHHhCcCEEEecHHHHHH-hhhcCHHHHHHHHHHHHHH
Q 017781 288 GTDVFK----ALALGASGIFIGRPVVYS-LAAEGEKGVRRVLEMLREE 330 (366)
Q Consensus 288 ~~dv~k----alalGAd~V~igr~~l~~-l~~~G~~gv~~~~~~l~~e 330 (366)
-.++++ |-.+|||++++-.|+++. . .++++.++++.+.+.
T Consensus 84 t~~ai~la~~A~~~Gadavlv~~P~y~~~~---s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 84 IEDAADQSAEALNAGARNILLAPPSYFKNV---SDDGLFAWFSAVFSK 128 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSSCSC---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcCCCCC---CHHHHHHHHHHHHHh
Confidence 555543 334799999999998764 2 466766666655543
No 258
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=94.81 E-value=0.097 Score=47.98 Aligned_cols=85 Identities=21% Similarity=0.219 Sum_probs=61.3
Q ss_pred CHHHHHHHHHhcCCCEEEEecc--CHHH---HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 213 SWKDVKWLQTITKLPILVKGVL--TAED---VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~--~~~d---~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
+.++++.+|+.+++||+-|.-. ..+- ..+|||+|.+...- + ...++..+.+..+.+ .+.++++ +++
T Consensus 89 s~~dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~---l--~~~~l~~l~~~a~~l--Gl~~lvE--v~~ 159 (251)
T 1i4n_A 89 DPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARI---L--TAEQIKEIYEAAEEL--GMDSLVE--VHS 159 (251)
T ss_dssp CTHHHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGG---S--CHHHHHHHHHHHHTT--TCEEEEE--ECS
T ss_pred CHHHHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEeccc---C--CHHHHHHHHHHHHHc--CCeEEEE--eCC
Confidence 5678999999999999999642 3322 88999999875431 1 112344444444444 6777776 779
Q ss_pred HHHHHHHHHh-CcCEEEecH
Q 017781 288 GTDVFKALAL-GASGIFIGR 306 (366)
Q Consensus 288 ~~dv~kalal-GAd~V~igr 306 (366)
.+++..|+.+ |++.|++-.
T Consensus 160 ~eE~~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 160 REDLEKVFSVIRPKIIGINT 179 (251)
T ss_dssp HHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEeC
Confidence 9999999999 999998875
No 259
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=94.80 E-value=0.062 Score=51.55 Aligned_cols=101 Identities=19% Similarity=0.280 Sum_probs=63.5
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+-
T Consensus 47 g~ID~~~l~~lv~~l--------------i~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st 112 (343)
T 2v9d_A 47 GQLDKPGTAALIDDL--------------IKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNA 112 (343)
T ss_dssp SSBCHHHHHHHHHHH--------------HHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCH
Confidence 455666665555432 56799999998876642211211 234566666677778999876665555
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEML 327 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l 327 (366)
.++++ |-.+|||+|++-.|+++.. .++++.++++.+
T Consensus 113 ~eai~la~~A~~~Gadavlv~~P~Y~~~---s~~~l~~~f~~V 152 (343)
T 2v9d_A 113 RETIELSQHAQQAGADGIVVINPYYWKV---SEANLIRYFEQV 152 (343)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSSSCC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCC---CHHHHHHHHHHH
Confidence 55553 3448999999999987642 455555554443
No 260
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=94.80 E-value=0.19 Score=49.66 Aligned_cols=129 Identities=18% Similarity=0.178 Sum_probs=89.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++=+.+.+|... ..+.. | .. .+...
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~------~~G~~-~----------------------~~-------~~~~~ 188 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTL------RGGHM-P----------------------AM-------TDISL 188 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBT------TCCBC-C----------------------CH-------HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCccc------ccCCC-c----------------------ch-------hhHHH
Confidence 4677888888888889999998877665310 00000 0 00 01123
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ .+||+
T Consensus 189 d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPIa 258 (433)
T 3rcy_A 189 SVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEE--------PVPPDNVGAMAQVARAV--RIPVA 258 (433)
T ss_dssp HHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHS--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEEC--------CCChhhHHHHHHHHhcc--CCCEE
Confidence 456788999887 578888732 45554 5678888741 11223678888888887 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
+++.+.+..|+.+++..| +|.|++--.
T Consensus 259 ~dE~~~~~~~~~~~l~~g~~D~v~~d~~ 286 (433)
T 3rcy_A 259 TGERLTTKAEFAPVLREGAAAILQPALG 286 (433)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCHH
T ss_pred ecCCCCCHHHHHHHHHcCCCCEEEeCch
Confidence 999999999999999987 899998743
No 261
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=94.79 E-value=0.071 Score=49.11 Aligned_cols=38 Identities=18% Similarity=0.499 Sum_probs=32.3
Q ss_pred CHHHHHHHHHhcCCCEEEEe-ccCHHH----HHcCCcEEEEcC
Q 017781 213 SWKDVKWLQTITKLPILVKG-VLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~-v~~~~d----~~aGad~I~vs~ 250 (366)
+++.++++++..++||++.+ +.++++ .++|||+|+|..
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 47789999998899999995 567887 899999999865
No 262
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=94.75 E-value=0.06 Score=50.75 Aligned_cols=86 Identities=19% Similarity=0.345 Sum_probs=55.1
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHH----HHHhCcCEEEecHHHHHHhh
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~k----alalGAd~V~igr~~l~~l~ 313 (366)
.+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+-.++++ |-.+|||++++-.|+++..
T Consensus 43 i~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~- 121 (306)
T 1o5k_A 43 LENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKP- 121 (306)
T ss_dssp HHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-
T ss_pred HHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCC-
Confidence 56799999998876643211211 23456666666777899887656555555553 3347999999999987642
Q ss_pred hcCHHHHHHHHHHH
Q 017781 314 AEGEKGVRRVLEML 327 (366)
Q Consensus 314 ~~G~~gv~~~~~~l 327 (366)
.++++.++++.+
T Consensus 122 --s~~~l~~~f~~v 133 (306)
T 1o5k_A 122 --TQEGLYQHYKYI 133 (306)
T ss_dssp --CHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHH
Confidence 455555444443
No 263
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=94.74 E-value=0.58 Score=42.05 Aligned_cols=39 Identities=28% Similarity=0.509 Sum_probs=35.3
Q ss_pred cCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 273 TQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 273 ~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
+..+++|+.-|||.++.|+..+...|+|++.||+++|.+
T Consensus 170 ~~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a 208 (226)
T 1w0m_A 170 HFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKA 208 (226)
T ss_dssp HCTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTC
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCC
Confidence 345789999999999999999999999999999999864
No 264
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=94.73 E-value=0.02 Score=52.83 Aligned_cols=61 Identities=16% Similarity=0.147 Sum_probs=48.6
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~ 310 (366)
.+.|++.+.+-.-.+ ...+.+.++.+.+ .+||.+.|||++- |+.+.+ +||+-|.+|+..+.
T Consensus 48 ~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~--~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 48 KDRDVQGCHVIKLGP-------NNDDAAREALQES--PQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp HHTTCTTCEEEEESS-------SCHHHHHHHHHHS--TTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBC
T ss_pred HHcCCCEEEEEeCCC-------CCHHHHHHHHhcC--CceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHh
Confidence 677888887632111 4567788888887 7999999999987 999999 99999999987653
No 265
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=94.73 E-value=0.077 Score=49.84 Aligned_cols=87 Identities=15% Similarity=0.261 Sum_probs=57.2
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCC-CceEEEecCCCCHHHHHH----HHHhCcCEEEecHHHHHHh
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQG-RIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYSL 312 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~-~i~vi~~GGI~~~~dv~k----alalGAd~V~igr~~l~~l 312 (366)
.+.|+|+|++.++.|....-... ..+++..+++.+.+ ++|||+--|=.+-.++++ |-.+|||++++-.|+++..
T Consensus 38 i~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~ 117 (301)
T 3m5v_A 38 IENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKP 117 (301)
T ss_dssp HHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC
T ss_pred HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC
Confidence 56899999998876642211211 23456666677777 899998666556666654 3348999999999987642
Q ss_pred hhcCHHHHHHHHHHHH
Q 017781 313 AAEGEKGVRRVLEMLR 328 (366)
Q Consensus 313 ~~~G~~gv~~~~~~l~ 328 (366)
.++++.++++.+.
T Consensus 118 ---s~~~l~~~f~~va 130 (301)
T 3m5v_A 118 ---TQQGLYEHYKAIA 130 (301)
T ss_dssp ---CHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHH
Confidence 3555555544443
No 266
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=94.73 E-value=0.24 Score=47.71 Aligned_cols=114 Identities=11% Similarity=0.077 Sum_probs=77.8
Q ss_pred CHHHHHHHHHHHHHc-CCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 134 DRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 134 d~~~~~~~l~ra~~~-G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
+++.+.+.++++.+. |++++=+.++.+. +..
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~------------------------------------------------~~~ 182 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDD------------------------------------------------PNI 182 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSS------------------------------------------------HHH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCC------------------------------------------------HHH
Confidence 667677777777777 9999877665321 111
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- +. ..+..++.+.++++.+ .+||+
T Consensus 183 d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa 252 (372)
T 3tj4_A 183 DIARLTAVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFE-------EP-LWYDDVTSHARLARNT--SIPIA 252 (372)
T ss_dssp HHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCEEEEE-------SC-SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCCCEEE-------CC-CCchhHHHHHHHHhhc--CCCEE
Confidence 345677777776 456666632 34443 345555553 11 1223577888888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
++.-+.+..|+.+++..| +|.|++-
T Consensus 253 ~dE~~~~~~~~~~~i~~~~~d~v~~k 278 (372)
T 3tj4_A 253 LGEQLYTVDAFRSFIDAGAVAYVQPD 278 (372)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred eCCCccCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999999987 7999885
No 267
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=94.70 E-value=1.1 Score=40.16 Aligned_cols=49 Identities=31% Similarity=0.496 Sum_probs=39.1
Q ss_pred HHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 263 IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 263 ~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
++...+..+....+++|+.-|||.++.|+..+...|+|++.||++++.+
T Consensus 163 ~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a 211 (225)
T 1hg3_A 163 ITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKA 211 (225)
T ss_dssp HHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTC
T ss_pred HHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCC
Confidence 4333333333445799999999999999999999999999999999864
No 268
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=94.69 E-value=0.072 Score=50.28 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=64.2
Q ss_pred CCCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 209 DRSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 209 d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
|...+++.++++.+.. .+.|+|+|++.++.|-...-... ..+++..+++.+.+++|||+--|=.+
T Consensus 23 dg~iD~~~l~~lv~~l--------------i~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~ 88 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFM--------------IDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYS 88 (309)
T ss_dssp TSSBCHHHHHHHHHHH--------------HHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS
T ss_pred CCCcCHHHHHHHHHHH--------------HHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCch
Confidence 3456676666555432 57899999998876632211111 23456666666777899998655555
Q ss_pred HHHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHH
Q 017781 288 GTDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLR 328 (366)
Q Consensus 288 ~~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~ 328 (366)
-.++++ |-.+|||++++-.|+.+...--.++++.++++.+.
T Consensus 89 t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va 133 (309)
T 3fkr_A 89 TQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVS 133 (309)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHH
Confidence 555543 33479999999999762110114566555554443
No 269
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=94.68 E-value=0.084 Score=48.94 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=30.3
Q ss_pred HHHHHHHHHhcCCCEEEEe-ccCHHH----HHcCCcEEEEcC
Q 017781 214 WKDVKWLQTITKLPILVKG-VLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~vK~-v~~~~d----~~aGad~I~vs~ 250 (366)
.+.++++|+.+++|+++-. +.++++ .++|||+++|..
T Consensus 197 ~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVGS 238 (271)
T 3nav_A 197 HALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISGS 238 (271)
T ss_dssp HHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 4568999999999999975 457877 689999999843
No 270
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=94.65 E-value=0.056 Score=50.57 Aligned_cols=87 Identities=18% Similarity=0.372 Sum_probs=54.7
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHH----HHHhCcCEEEecHHHHHHhh
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~k----alalGAd~V~igr~~l~~l~ 313 (366)
.+.|+|+|++.++.|....-... ..+.+..+++.+.+++|||+--|=.+-.++++ |-.+|||+|++-.|+++..
T Consensus 31 i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~- 109 (292)
T 2vc6_A 31 IEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKP- 109 (292)
T ss_dssp HHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-
T ss_pred HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-
Confidence 56799999988876643211221 23455666666667899876555445455543 3447999999999987642
Q ss_pred hcCHHHHHHHHHHHH
Q 017781 314 AEGEKGVRRVLEMLR 328 (366)
Q Consensus 314 ~~G~~gv~~~~~~l~ 328 (366)
.++++.++++.+.
T Consensus 110 --s~~~l~~~f~~ia 122 (292)
T 2vc6_A 110 --TQEGIYQHFKAID 122 (292)
T ss_dssp --CHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHH
Confidence 4555555544443
No 271
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.64 E-value=0.091 Score=49.50 Aligned_cols=105 Identities=9% Similarity=0.066 Sum_probs=65.9
Q ss_pred CCCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 209 DRSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 209 d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
|...+++.++++.+.. .+.|+|+|++.++.|-...-... ..+++..+++.+.+++|||+--|-.+
T Consensus 29 dg~iD~~~l~~lv~~l--------------i~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~ 94 (307)
T 3s5o_A 29 TAEVDYGKLEENLHKL--------------GTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCES 94 (307)
T ss_dssp TSCBCHHHHHHHHHHH--------------TTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSS
T ss_pred CCCcCHHHHHHHHHHH--------------HHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Confidence 3456777666655532 46799999998876642211211 23456666666777899888555555
Q ss_pred HHHHH----HHHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHH
Q 017781 288 GTDVF----KALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLR 328 (366)
Q Consensus 288 ~~dv~----kalalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~ 328 (366)
-.+++ .|-.+|||++++-.|+++... -.++++.++++.+.
T Consensus 95 t~~ai~la~~A~~~Gadavlv~~P~y~~~~-~s~~~l~~~f~~ia 138 (307)
T 3s5o_A 95 TQATVEMTVSMAQVGADAAMVVTPCYYRGR-MSSAALIHHYTKVA 138 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCTTGGG-CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCcCCCC-CCHHHHHHHHHHHH
Confidence 55555 344589999999999876311 14566665555544
No 272
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=94.62 E-value=0.48 Score=45.38 Aligned_cols=116 Identities=16% Similarity=0.202 Sum_probs=77.5
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++-+++... ...
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-------------------------------------------------~~~ 170 (369)
T 2p8b_A 140 ADPENMAEEAASMIQKGYQSFKMKVGTN-------------------------------------------------VKE 170 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSC-------------------------------------------------HHH
T ss_pred CChHHHHHHHHHHHHcCcCEEEEEeCCC-------------------------------------------------HHH
Confidence 4677777788888889999998765421 011
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH---------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED---------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d---------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
..+.++.+|+.+ +.++.++.- .+.++ .+.|+++|- +. ..+..++.+.++++.+ ++||
T Consensus 171 ~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPI 240 (369)
T 2p8b_A 171 DVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNIDWIE-------QP-VIADDIDAMAHIRSKT--DLPL 240 (369)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCCSCEE-------CC-BCTTCHHHHHHHHHTC--CSCE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEE-------CC-CCcccHHHHHHHHHhC--CCCE
Confidence 234455555554 355555532 11111 345666553 11 1234677888888877 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
++++.+.+..++.+++..| +|.|++-..
T Consensus 241 ~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (369)
T 2p8b_A 241 MIDEGLKSSREMRQIIKLEAADKVNIKLM 269 (369)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred EeCCCCCCHHHHHHHHHhCCCCEEEeecc
Confidence 9999999999999999987 899999754
No 273
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=94.61 E-value=0.07 Score=49.89 Aligned_cols=101 Identities=15% Similarity=0.224 Sum_probs=63.7
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+-
T Consensus 17 g~iD~~~l~~lv~~l--------------i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t 82 (292)
T 2ojp_A 17 GNVCRASLKKLIDYH--------------VASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANAT 82 (292)
T ss_dssp SCBCHHHHHHHHHHH--------------HHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccH
Confidence 456676666555432 56799999998876643211221 234566666667778999876665566
Q ss_pred HHHHHHH----HhCcCEEEecHHHHHHhhhcCHHHHHHHHHHH
Q 017781 289 TDVFKAL----ALGASGIFIGRPVVYSLAAEGEKGVRRVLEML 327 (366)
Q Consensus 289 ~dv~kal----alGAd~V~igr~~l~~l~~~G~~gv~~~~~~l 327 (366)
.++++.. .+|||++++-.|+++.. .++++.++++.+
T Consensus 83 ~~ai~la~~a~~~Gadavlv~~P~y~~~---s~~~l~~~f~~i 122 (292)
T 2ojp_A 83 AEAISLTQRFNDSGIVGCLTVTPYYNRP---SQEGLYQHFKAI 122 (292)
T ss_dssp HHHHHHHHHTTTSSCSEEEEECCCSSCC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCC---CHHHHHHHHHHH
Confidence 6665433 37999999999987642 455555444443
No 274
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=94.59 E-value=0.051 Score=51.47 Aligned_cols=103 Identities=19% Similarity=0.203 Sum_probs=67.4
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+.-|- +-
T Consensus 28 g~iD~~~l~~lv~~l--------------i~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t 92 (316)
T 3e96_A 28 GSIDWHHYKETVDRI--------------VDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY-AT 92 (316)
T ss_dssp CCBCHHHHHHHHHHH--------------HTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SH
T ss_pred CCCCHHHHHHHHHHH--------------HHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CH
Confidence 345666666655532 46799999988876632211111 234566666777778999987674 77
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREE 330 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~e 330 (366)
.++++ |-.+|||+|++-.|+.+. -.++++.++++.+.+.
T Consensus 93 ~~ai~la~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a 135 (316)
T 3e96_A 93 STAIELGNAAKAAGADAVMIHMPIHPY---VTAGGVYAYFRDIIEA 135 (316)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCCSC---CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCC---CCHHHHHHHHHHHHHh
Confidence 77664 445899999999998653 2567776666666554
No 275
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=94.56 E-value=0.054 Score=51.29 Aligned_cols=103 Identities=18% Similarity=0.240 Sum_probs=64.9
Q ss_pred CCCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 209 DRSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 209 d~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
|...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|= +
T Consensus 27 dg~iD~~~l~~lv~~l--------------i~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-s 91 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFL--------------LQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-S 91 (314)
T ss_dssp TCCBCHHHHHHHHHHH--------------HHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-S
T ss_pred CCCCCHHHHHHHHHHH--------------HHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-C
Confidence 3456777666655532 56799999988766532211211 234566666677778998864444 5
Q ss_pred HHHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHH
Q 017781 288 GTDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRE 329 (366)
Q Consensus 288 ~~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~ 329 (366)
-.++++ |-.+|||++++-.|+++.. .++++.+++..+.+
T Consensus 92 t~~ai~la~~A~~~Gadavlv~~P~y~~~---s~~~l~~~f~~va~ 134 (314)
T 3d0c_A 92 VDTAIELGKSAIDSGADCVMIHQPVHPYI---TDAGAVEYYRNIIE 134 (314)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCCSCC---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCC---CHHHHHHHHHHHHH
Confidence 555553 3347999999999987642 46666666555544
No 276
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.54 E-value=0.1 Score=49.38 Aligned_cols=103 Identities=14% Similarity=0.225 Sum_probs=62.3
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|-...-... ..+++..+++.+.+++|||+--|=.+-
T Consensus 27 g~iD~~~l~~lv~~l--------------i~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t 92 (318)
T 3qfe_A 27 DTLDLASQERYYAYL--------------ARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHST 92 (318)
T ss_dssp TEECHHHHHHHHHHH--------------HTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSH
T ss_pred CCCCHHHHHHHHHHH--------------HHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCH
Confidence 345666666555432 46799999998876632211111 234566666677778999885565566
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEML 327 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l 327 (366)
.++++ |-.+|||++++-.|++|.-. ..++++.++++.+
T Consensus 93 ~~ai~la~~a~~~Gadavlv~~P~y~~kp-~~~~~l~~~f~~i 134 (318)
T 3qfe_A 93 RQVLEHINDASVAGANYVLVLPPAYFGKA-TTPPVIKSFFDDV 134 (318)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCC---C-CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCC-CCHHHHHHHHHHH
Confidence 65553 33489999999999766310 1345555554444
No 277
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=94.46 E-value=0.11 Score=46.28 Aligned_cols=76 Identities=18% Similarity=0.248 Sum_probs=51.5
Q ss_pred HHHHHHHHHhcCCCEEEEe-ccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 214 WKDVKWLQTITKLPILVKG-VLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~vK~-v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
.+.++.+++.++-.++..+ +.+.++ .++|||+|+..+ ...+.+ +.++.. .++++. |+.|+
T Consensus 55 ~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p~----------~d~~v~-~~~~~~--g~~~i~--G~~t~ 119 (214)
T 1wbh_A 55 VDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPG----------LTEPLL-KAATEG--TIPLIP--GISTV 119 (214)
T ss_dssp HHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEESS----------CCHHHH-HHHHHS--SSCEEE--EESSH
T ss_pred HHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcCC----------CCHHHH-HHHHHh--CCCEEE--ecCCH
Confidence 4568888888753333333 345554 999999996422 122333 333344 567766 49999
Q ss_pred HHHHHHHHhCcCEEEe
Q 017781 289 TDVFKALALGASGIFI 304 (366)
Q Consensus 289 ~dv~kalalGAd~V~i 304 (366)
+++.+|+.+|||.|.+
T Consensus 120 ~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 120 SELMLGMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCCCCEEEE
Confidence 9999999999999998
No 278
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=94.43 E-value=0.9 Score=42.46 Aligned_cols=65 Identities=20% Similarity=0.144 Sum_probs=45.2
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.++|||.|++-. +.++.+.+.++.+.++..+|+++.-+-....++.+.-++|...|.++...+.+
T Consensus 180 ~eAGAd~i~~e~--------~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~ra 244 (295)
T 1s2w_A 180 RNAGADAILMHS--------KKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRA 244 (295)
T ss_dssp HHTTCSEEEECC--------CSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHH
T ss_pred HHcCCCEEEEcC--------CCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 999999998732 23456777888888854599998733111112444556899999999877665
No 279
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=94.42 E-value=0.069 Score=48.63 Aligned_cols=58 Identities=24% Similarity=0.275 Sum_probs=41.2
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH-H---------HHHHHHHhCcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-T---------DVFKALALGASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~-~---------dv~kalalGAd~V~igr~~ 308 (366)
.+.|.++++.+ ..+ +.++++..+. .+++++|||+-. . .+.+++..|||.+.+||++
T Consensus 153 ~~~G~~g~V~~------------~~e-i~~lr~~~~~-~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I 218 (246)
T 2yyu_A 153 KESGLDGVVCS------------ANE-AAFIKERCGA-SFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRSL 218 (246)
T ss_dssp HHHTCCEEECC------------HHH-HHHHHHHHCT-TSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHHH
T ss_pred HHhCCCEEEeC------------HHH-HHHHHHhcCC-CCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHhh
Confidence 45677876542 234 6666666643 349999999843 2 2777888999999999998
Q ss_pred HH
Q 017781 309 VY 310 (366)
Q Consensus 309 l~ 310 (366)
+.
T Consensus 219 ~~ 220 (246)
T 2yyu_A 219 TR 220 (246)
T ss_dssp HT
T ss_pred cC
Confidence 64
No 280
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=94.41 E-value=0.065 Score=53.64 Aligned_cols=246 Identities=15% Similarity=0.182 Sum_probs=133.0
Q ss_pred hcccceeeecccc-CCCCCCccceeEcC-cccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHh
Q 017781 41 NAFSRILFRPRIL-IDVSKIDMNTTVLG-FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (366)
Q Consensus 41 ~~f~~i~l~pr~l-~~~~~vd~st~l~g-~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~ 118 (366)
-.||++.|+|... .+..++|+++++-. ..+..||+.+||...+ +..++.+..+.|....+.. ..+.++..
T Consensus 12 ~~~~d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~vt------~~eLa~av~~~Gg~G~i~~--~~~~e~~~ 83 (491)
T 1zfj_A 12 YTFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVT------GSKMAIAIARAGGLGVIHK--NMSITEQA 83 (491)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECC--SSCHHHHH
T ss_pred CChhhEEeccCcCCcCccccccchhhhhcceecCceEecCchhcc------HHHHHHHHHHcCCceEEeC--CCCHHHHH
Confidence 3699999999876 35578999998854 6788999999997532 5578888888887766642 24554432
Q ss_pred c-------cCC--CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEec--CC-CCCc-chhHHHhhhcCCCCcccccccc
Q 017781 119 S-------TGP--GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTV--DT-PRLG-RREADIKNRFTLPPFLTLKNFQ 185 (366)
Q Consensus 119 ~-------~~~--~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtv--d~-p~~g-~r~~d~~~~~~~p~~~~~~~~~ 185 (366)
+ ... .+-.+-+. ......+.++...+.+...+.|.- +. -..| -..+|+.... +....+..+.
T Consensus 84 ~~i~~v~~~~~im~~~~~~v~---~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~--~~~~~v~~im 158 (491)
T 1zfj_A 84 EEVRKVKRSENGVIIDPFFLT---PEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS--DYNAPISEHM 158 (491)
T ss_dssp HHHHHHHHHTTTTSSSCCCBC---SSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS--CSSSBTTTSC
T ss_pred HHHHHHhhHHhcCcCCCeEEC---CCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc--cCCCcHHHHc
Confidence 2 111 11111111 223356677777788888776642 11 0011 1223333210 0000000000
Q ss_pred cc-ccCCCc-cccchhhHHHhhhc-------cC------CCCCHHH-HHHHHH-----hcCCCEEEEeccC-----HHH-
Q 017781 186 GL-DLGKMD-EANDSGLAAYVAGQ-------ID------RSLSWKD-VKWLQT-----ITKLPILVKGVLT-----AED- 238 (366)
Q Consensus 186 ~~-~~~~~~-~~~~~~~~~~~~~~-------~d------~~~~~~~-i~~lr~-----~~~~pv~vK~v~~-----~~d- 238 (366)
.- ....+. ..........+... .| .-.+.++ ++.+.+ ....++.+.+..+ .+.
T Consensus 159 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a 238 (491)
T 1zfj_A 159 TSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERA 238 (491)
T ss_dssp CCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHH
T ss_pred CCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHH
Confidence 00 000000 00000000000000 00 1124444 444442 0012222222222 232
Q ss_pred ---HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 239 ---VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ---~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.++|+|.|+++..+|+ ....++.+.++++.++ .+|++ .|+|.+.+++.+++.+|||+|.+|
T Consensus 239 ~~l~~~G~d~ivi~~a~g~----~~~~~~~i~~l~~~~p-~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 239 EALFEAGADAIVIDTAHGH----SAGVLRKIAEIRAHFP-NRTLI-AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHTCSEEEECCSCTT----CHHHHHHHHHHHHHCS-SSCEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHcCCCeEEEeeecCc----chhHHHHHHHHHHHCC-CCcEe-CCCccCHHHHHHHHHcCCCEEEEC
Confidence 8899999999875442 2245677888887764 68998 899999999999999999999887
No 281
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=94.39 E-value=0.4 Score=46.05 Aligned_cols=86 Identities=17% Similarity=0.161 Sum_probs=59.3
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- + ...+..++.+.++++.. .+||++
T Consensus 172 ~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~ 241 (367)
T 3dg3_A 172 TAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADLDLLFAE-------E-LCPADDVLSRRRLVGQL--DMPFIA 241 (367)
T ss_dssp HHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSCCSCEE-------S-CSCTTSHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCEEE-------C-CCCcccHHHHHHHHHhC--CCCEEe
Confidence 45566777765 456666632 34443 445666663 1 11223567788888877 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecHHHH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGRPVV 309 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr~~l 309 (366)
++.+.+..|+.+++..| +|.|++--..+
T Consensus 242 dE~~~~~~~~~~~i~~~~~d~v~~k~~~~ 270 (367)
T 3dg3_A 242 DESVPTPADVTREVLGGSATAISIKTART 270 (367)
T ss_dssp CTTCSSHHHHHHHHHHTSCSEEEECHHHH
T ss_pred cCCcCCHHHHHHHHHcCCCCEEEeehhhh
Confidence 99999999999999988 89999965443
No 282
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=94.28 E-value=0.35 Score=46.88 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=79.7
Q ss_pred CCHHHHHHHHHHHHHc-CCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 133 KDRNVVAQLVRRAERA-GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~-G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
.+++.+.+.++++.+. |++++=+.++.+ ++.
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~------------------------------------------------~~~ 197 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHG------------------------------------------------DLA 197 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSS------------------------------------------------CHH
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCC------------------------------------------------CHH
Confidence 4677777777777777 999887765421 011
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
.+.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- + ...+..++.+.++++.. .+||
T Consensus 198 ~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------e-P~~~~d~~~~~~l~~~~--~iPI 267 (383)
T 3toy_A 198 TDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTWIE-------E-PVPQENLSGHAAVRERS--EIPI 267 (383)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------C-CSCTTCHHHHHHHHHHC--SSCE
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE-------C-CCCcchHHHHHHHHhhc--CCCE
Confidence 2345677777765 456666632 34443 556777774 1 11223577788888877 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++.-+.+..|+.+++..| +|.|++--
T Consensus 268 a~dE~~~~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 268 QAGENWWFPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp EECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999999988 79988863
No 283
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.21 E-value=0.15 Score=48.23 Aligned_cols=103 Identities=13% Similarity=0.171 Sum_probs=66.2
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|-...-... ..+++..+++.+ +++|||+--|=.+-
T Consensus 24 g~iD~~~l~~lv~~l--------------i~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t 88 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFY--------------AEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGF 88 (313)
T ss_dssp SCBCHHHHHHHHHHH--------------HHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSH
T ss_pred CCcCHHHHHHHHHHH--------------HHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCH
Confidence 345666665554432 56899999998876632211111 234566667777 79999986565566
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 331 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~el 331 (366)
.++++ |-.+|||++++-.|+ +. ..++++.++++.+.+..
T Consensus 89 ~~ai~la~~A~~~Gadavlv~~P~-~~---~s~~~l~~~f~~va~a~ 131 (313)
T 3dz1_A 89 AAMRRLARLSMDAGAAGVMIAPPP-SL---RTDEQITTYFRQATEAI 131 (313)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCT-TC---CSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCC-CC---CCHHHHHHHHHHHHHhC
Confidence 66553 334899999999998 32 25677766666665543
No 284
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.15 E-value=0.11 Score=49.07 Aligned_cols=86 Identities=15% Similarity=0.271 Sum_probs=56.2
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHH----HHHhCc-CEEEecHHHHHHh
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGA-SGIFIGRPVVYSL 312 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~k----alalGA-d~V~igr~~l~~l 312 (366)
.+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+.-|=.+-.++++ |-.+|| |++++-.|+++..
T Consensus 38 i~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~ 117 (311)
T 3h5d_A 38 LAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKP 117 (311)
T ss_dssp HHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCC
T ss_pred HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCC
Confidence 56799999998876643211211 23456666677777899998666656666664 334697 9999999987642
Q ss_pred hhcCHHHHHHHHHHH
Q 017781 313 AAEGEKGVRRVLEML 327 (366)
Q Consensus 313 ~~~G~~gv~~~~~~l 327 (366)
.++++.++++.+
T Consensus 118 ---s~~~l~~~f~~v 129 (311)
T 3h5d_A 118 ---SQEGMYQHFKAI 129 (311)
T ss_dssp ---CHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHH
Confidence 355555444443
No 285
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=94.09 E-value=0.098 Score=48.17 Aligned_cols=74 Identities=23% Similarity=0.476 Sum_probs=48.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHH----------HHHHHHhCcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~d----------v~kalalGAd~V~igr~~ 308 (366)
.++|+|++++|. +.+..+++.++.+ -++++.|||-..+ +.+++..|||.+.+||++
T Consensus 154 ~~~G~dGvV~s~-------------~e~~~ir~~~~~~-f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I 219 (259)
T 3tfx_A 154 KHSGADGVICSP-------------LEVKKLHENIGDD-FLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPI 219 (259)
T ss_dssp HHTTCCEEECCG-------------GGHHHHHHHHCSS-SEEEECCCCCC-----------CHHHHHHTTCSEEEECHHH
T ss_pred HHhCCCEEEECH-------------HHHHHHHhhcCCc-cEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHH
Confidence 578999998742 1234555555433 3678899986432 778899999999999997
Q ss_pred HHHhhhcCHHHHHHHHHHHHHHHH
Q 017781 309 VYSLAAEGEKGVRRVLEMLREEFE 332 (366)
Q Consensus 309 l~~l~~~G~~gv~~~~~~l~~el~ 332 (366)
..+ ..+ ...++.++++++
T Consensus 220 ~~a---~dp---~~a~~~i~~~~~ 237 (259)
T 3tfx_A 220 TLA---SDP---KAAYEAIKKEFN 237 (259)
T ss_dssp HTS---SSH---HHHHHHHHHHHT
T ss_pred hCC---CCH---HHHHHHHHHHHH
Confidence 643 122 234556666543
No 286
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=94.08 E-value=0.2 Score=46.34 Aligned_cols=65 Identities=22% Similarity=0.160 Sum_probs=51.9
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 309 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l 309 (366)
.++||++|.|-.-.+. .. ...+.|..+++.+ ++||+.-..|.+..++..+.++|||+|.++...+
T Consensus 89 ~~~GA~~IsVltd~~~--f~--Gs~~~L~~ir~~v--~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 89 EEGGAACLSVLTDTPS--FQ--GAPEFLTAARQAC--SLPALRKDFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp HHTTCSEEEEECCSTT--TC--CCHHHHHHHHHTS--SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred HHCCCCEEEEeccccc--cC--CCHHHHHHHHHhc--CCCEEECCccCCHHHHHHHHHcCCCEEEEccccc
Confidence 7899999987542211 11 2556778888877 8999999999999999999999999999997654
No 287
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=94.00 E-value=0.37 Score=47.53 Aligned_cols=114 Identities=15% Similarity=0.181 Sum_probs=79.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 213 (366)
+++.+.+.++++.+.||+++-+.+... ....
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~-------------------------------------------------~~~d 228 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGAN-------------------------------------------------VQDD 228 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-------------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCC-------------------------------------------------HHHH
Confidence 677777888888899999988765421 0123
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.++.+|+.+ +.+|.+..- .+.++ .+.|++.|- +. ..+..++.+.++++.+. .+||++
T Consensus 229 ~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~-~iPIa~ 299 (441)
T 2hxt_A 229 IRRCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWIE-------EP-TSPDDVLGHAAIRQGIT-PVPVST 299 (441)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCCSCEE-------CC-SCTTCHHHHHHHHHHHT-TSCEEE
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeee-------CC-CCHHHHHHHHHHHhhCC-CCCEEE
Confidence 45567777765 466666532 34444 456777663 11 12235777888887762 599999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
++.+.+..++.+.+..| +|.|++-
T Consensus 300 dE~~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 300 GEHTQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEECCC
T ss_pred eCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 99999999999999988 7999885
No 288
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=93.99 E-value=0.36 Score=46.93 Aligned_cols=86 Identities=10% Similarity=0.081 Sum_probs=60.4
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- +. ..+..++.+.++++.+ .+||+
T Consensus 205 d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa 274 (390)
T 3ugv_A 205 DIETAEAVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEWIE-------EP-VVYDNFDGYAQLRHDL--KTPLM 274 (390)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE-------CC-SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCcccHHHHHHHHHhc--CCCEE
Confidence 345577777765 456666632 34443 455677664 11 1223577888888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecHHH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGRPV 308 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr~~ 308 (366)
++.-+.+..|+.+++..| +|.|++--..
T Consensus 275 ~dE~~~~~~~~~~~i~~~a~d~v~ik~~~ 303 (390)
T 3ugv_A 275 IGENFYGPREMHQALQAGACDLVMPDFMR 303 (390)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCBHHH
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEEeCccc
Confidence 999999999999999987 7999887543
No 289
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=93.98 E-value=0.081 Score=48.62 Aligned_cols=73 Identities=22% Similarity=0.368 Sum_probs=48.9
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH-HH---------HHHHHHhCcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TD---------VFKALALGASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~-~d---------v~kalalGAd~V~igr~~ 308 (366)
.++|+|++++|. ..+..+++.++.+. ++++.||+-. .+ ..+++..|||.+.+||++
T Consensus 172 ~~aG~~GvV~sa-------------~e~~~iR~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~iVvGr~I 237 (255)
T 3ldv_A 172 KNAGLDGVVCSA-------------QEASLLKQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYLVIGRPI 237 (255)
T ss_dssp HHTTCSEEECCH-------------HHHHHHHHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEEEECHHH
T ss_pred HHcCCCEEEECH-------------HHHHHHHHhcCCCc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEEEECHHH
Confidence 578999998753 23556666665444 6788899853 23 567889999999999998
Q ss_pred HHHhhhcCHHHHHHHHHHHHHHH
Q 017781 309 VYSLAAEGEKGVRRVLEMLREEF 331 (366)
Q Consensus 309 l~~l~~~G~~gv~~~~~~l~~el 331 (366)
..+ ..+ ...++.+++|+
T Consensus 238 ~~a---~dp---~~a~~~i~~ei 254 (255)
T 3ldv_A 238 TQA---AHP---EVVLEEINSSL 254 (255)
T ss_dssp HTC---SCH---HHHHHHHHHHC
T ss_pred hCC---CCH---HHHHHHHHHhh
Confidence 643 122 23455565554
No 290
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=93.95 E-value=0.37 Score=46.27 Aligned_cols=44 Identities=25% Similarity=0.231 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 262 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
.++.+.++++.+ ++||++++.+.+..|+.+++..| +|.|++--.
T Consensus 227 ~~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 271 (371)
T 2ps2_A 227 TWRECISLRRKT--DIPIIYDELATNEMSIVKILADDAAEGIDLKIS 271 (371)
T ss_dssp SHHHHHHHHTTC--CSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHH
T ss_pred CHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHhCCCCEEEechh
Confidence 677788887766 79999999999999999999987 799999643
No 291
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=93.95 E-value=0.28 Score=47.91 Aligned_cols=128 Identities=19% Similarity=0.133 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++-+.+..+..+. .+. .+ . . .+...
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~------~g~-~~----------------------~-~------~~~~~ 193 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIY------DGH-QP----------------------S-L------EDLER 193 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTT------CSB-CC----------------------C-H------HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCccc------ccc-cc----------------------c-H------HHHHH
Confidence 36677777777777889999988765432110 000 00 0 0 01122
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-- . ..+..++.+.++++.+ .+||+
T Consensus 194 d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEe-------P-~~~~~~~~~~~l~~~~--~iPIa 263 (404)
T 4e5t_A 194 SEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARRLEAYDPLWFEE-------P-IPPEKPEDMAEVARYT--SIPVA 263 (404)
T ss_dssp HHHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC-------C-SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCcEEEC-------C-CCcccHHHHHHHHhhC--CCCEE
Confidence 456788999887 578888743 45554 5678888851 1 1223577888888887 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++.+.+..|+.+++..| +|.|++--
T Consensus 264 ~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 264 TGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp ECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 999999999999999988 79998863
No 292
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=93.94 E-value=0.17 Score=49.89 Aligned_cols=114 Identities=16% Similarity=0.189 Sum_probs=79.0
Q ss_pred CCH-HHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 133 KDR-NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 133 ~d~-~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
.++ +.+.+.++++.+.|++++-+.+... ..
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~~-------------------------------------------------~~ 213 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGDA-------------------------------------------------AR 213 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCSC-------------------------------------------------HH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCCC-------------------------------------------------HH
Confidence 456 7777777888888999987754320 01
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCC-ce
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR-IP 278 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~-i~ 278 (366)
...+.++.+|+.+ +.+|.+..- .+.++ .+.|++.|- +. ..+..++.+.++++.+ . +|
T Consensus 214 ~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~~iP 283 (428)
T 3bjs_A 214 VDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWLE-------EP-FACNDFASYREVAKIT--PLVP 283 (428)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSCEE-------CC-SCTTCHHHHHHHTTTC--SSSC
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCccCHHHHHHHHHhC--CCCc
Confidence 2345677777765 467777632 34444 567777764 11 1223577777777766 6 99
Q ss_pred EEEecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 279 VFLDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 279 vi~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
|++++.+.+..++.+++..| +|.|++-
T Consensus 284 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 284 IAAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp EEECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred EEcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 99999999999999999987 7888884
No 293
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=93.93 E-value=0.4 Score=46.43 Aligned_cols=132 Identities=17% Similarity=0.175 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+.+.+.+.++++.+.|++++-+.+.+...+.. .+++. + .++. ..+...
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~----~~~~~-~-------------------gg~~-------~~~~~~ 184 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSA----LQHVT-R-------------------RSMS-------AEAIEL 184 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTE----EECCB-T-------------------TBCC-------HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccccccc----ccccc-c-------------------CCcc-------hhhHHH
Confidence 467777777888889999999887654221100 00000 0 0000 001123
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +++|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ ++||+
T Consensus 185 ~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~ipIa 254 (392)
T 2poz_A 185 AYRRVKAVRDAAGPEIELMVDLSGGLTTDETIRFCRKIGELDICFVEE--------PCDPFDNGALKVISEQI--PLPIA 254 (392)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC--------CSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEE
Confidence 456788999877 578888743 45555 5667776641 11234678888888887 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
+++.+.+..++.+++..| +|.|++-
T Consensus 255 ~dE~~~~~~~~~~~i~~~~~d~v~ik 280 (392)
T 2poz_A 255 VGERVYTRFGFRKIFELQACGIIQPD 280 (392)
T ss_dssp ECTTCCHHHHHHHHHTTTCCSEECCC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999987 8999884
No 294
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=93.87 E-value=1.2 Score=41.96 Aligned_cols=63 Identities=17% Similarity=0.122 Sum_probs=41.1
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE---ecCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL---DGGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~---~GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.++|||.|.+-+ +.+.+.+.++.+.++ .+|+.+ .||-.-.-.+.+.-++|.+.|..+...+.+
T Consensus 188 ~eAGAD~ifi~~---------~~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~ra 253 (307)
T 3lye_A 188 RDEGADVGLLEG---------FRSKEQAAAAVAALA-PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLAP 253 (307)
T ss_dssp HHTTCSEEEECC---------CSCHHHHHHHHHHHT-TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHHH
T ss_pred HHCCCCEEEecC---------CCCHHHHHHHHHHcc-CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHHH
Confidence 899999998732 346677888888874 367654 344221122344445799999888766554
No 295
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=93.84 E-value=0.38 Score=46.24 Aligned_cols=115 Identities=13% Similarity=0.215 Sum_probs=78.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++=+.++.. +..
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~-------------------------------------------------~~~ 169 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGS-------------------------------------------------KEL 169 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCC-------------------------------------------------HHH
Confidence 5677777777777788999987655421 112
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- + ...+..++.+.++++.. .+||+
T Consensus 170 d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~~~~~~~~l~~~~--~iPIa 239 (368)
T 3q45_A 170 DVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQHCE-------E-PVSRNLYTALPKIRQAC--RIPIM 239 (368)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCSCEE-------C-CBCGGGGGGHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCCEEE-------C-CCChhHHHHHHHHHhhC--CCCEE
Confidence 345677777776 466666632 34443 456676664 1 11223456677787766 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++..+.+..|+.+++..| +|.|++--
T Consensus 240 ~dE~~~~~~~~~~~~~~~~~d~v~~k~ 266 (368)
T 3q45_A 240 ADESCCNSFDAERLIQIQACDSFNLKL 266 (368)
T ss_dssp ESTTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred EcCCcCCHHHHHHHHHcCCCCeEEech
Confidence 999999999999999987 79998864
No 296
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=93.83 E-value=0.076 Score=49.99 Aligned_cols=58 Identities=21% Similarity=0.260 Sum_probs=42.2
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH----------HHHHHHHhCcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----------DVFKALALGASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~----------dv~kalalGAd~V~igr~~ 308 (366)
.++|+|++++|.+ . +..+++.++.+ .+++++||+-.. .+.+++..|||.+.+||++
T Consensus 168 ~~~G~dGvV~s~~----------E---~~~IR~~~~~~-fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvGr~I 233 (303)
T 3ru6_A 168 YENGLDGMVCSVF----------E---SKKIKEHTSSN-FLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVGRPI 233 (303)
T ss_dssp HHTTCSEEECCTT----------T---HHHHHHHSCTT-SEEEECCCCTTC--------CCSHHHHHHTTCSEEEECHHH
T ss_pred HHcCCCEEEECHH----------H---HHHHHHhCCCc-cEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEChHH
Confidence 6789999987442 1 34666666433 488899998332 3667788999999999997
Q ss_pred HH
Q 017781 309 VY 310 (366)
Q Consensus 309 l~ 310 (366)
..
T Consensus 234 ~~ 235 (303)
T 3ru6_A 234 YK 235 (303)
T ss_dssp HT
T ss_pred hC
Confidence 64
No 297
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=93.76 E-value=0.39 Score=46.70 Aligned_cols=84 Identities=7% Similarity=-0.058 Sum_probs=63.5
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--c-CHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--L-TAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~-~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
+.+.++.+|+.+ +.+|.+..- . +.++ .+.|+++|- + ...+..++.+.++++.+ .+||
T Consensus 186 d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iE-------e-P~~~~~~~~~~~l~~~~--~iPI 255 (394)
T 3mqt_A 186 IVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLYFIE-------A-CLQHDDLIGHQKLAAAI--NTRL 255 (394)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCSEEE-------S-CSCTTCHHHHHHHHHHS--SSEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCeEEE-------C-CCCcccHHHHHHHHhhC--CCCE
Confidence 456788888886 578888743 3 5554 667888884 1 11223577888888887 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++++.+.+..|+.+++..| +|.|++--
T Consensus 256 a~dE~~~~~~~~~~~l~~~~~d~v~~k~ 283 (394)
T 3mqt_A 256 CGAEMSTTRFEAQEWLEKTGISVVQSDY 283 (394)
T ss_dssp EECTTCCHHHHHHHHHHHHCCSEECCCT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999999999987 89999853
No 298
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=93.76 E-value=0.24 Score=48.39 Aligned_cols=125 Identities=11% Similarity=0.011 Sum_probs=85.3
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
..+++.+.+.++++.+.|++++=+ +..+..+.. . . . .+..
T Consensus 123 ~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~----------~----------------------~-~------~~~~ 162 (405)
T 3rr1_A 123 GDRPADVIAGMKALQAGGFDHFKL-NGCEEMGII----------D----------------------T-S------RAVD 162 (405)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCB----------C----------------------S-H------HHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE-ecCCccccc----------c----------------------c-c------hhHH
Confidence 356788888888888899999877 554321000 0 0 0 0112
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
.+.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ .+||
T Consensus 163 ~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPI 232 (405)
T 3rr1_A 163 AAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEE--------PVLAEQAETYARLAAHT--HLPI 232 (405)
T ss_dssp HHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGGGCCSCEEC--------SSCCSSTHHHHHHHTTC--SSCE
T ss_pred HHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhcC--CCCE
Confidence 2456788889887 578888743 45554 5677777741 01223567778887766 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++++.+.+..|+.+++..| +|.|++--
T Consensus 233 a~dE~i~~~~~~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 233 AAGERMFSRFDFKRVLEAGGVSILQPDL 260 (405)
T ss_dssp EECTTCCSHHHHHHHHHHCCCSEECCBT
T ss_pred EecCCcCCHHHHHHHHHHhCCCeEEECh
Confidence 9999999999999999987 89999853
No 299
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=93.71 E-value=0.27 Score=48.84 Aligned_cols=85 Identities=21% Similarity=0.212 Sum_probs=62.3
Q ss_pred CHHHHHHHHHhcCCCEEEEecc-CHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 213 SWKDVKWLQTITKLPILVKGVL-TAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~-~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
+.++++.+|+.+++||+-|.-. +.-. ..+|||+|-+...- + ....+..|.+..+.+ .+.++++ +++
T Consensus 96 s~~dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~---l--~~~~l~~l~~~a~~l--gm~~LvE--vh~ 166 (452)
T 1pii_A 96 SFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSV---L--DDDQYRQLAAVAHSL--EMGVLTE--VSN 166 (452)
T ss_dssp CTTHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTT---C--CHHHHHHHHHHHHHT--TCEEEEE--ECS
T ss_pred CHHHHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEccc---C--CHHHHHHHHHHHHHc--CCeEEEE--eCC
Confidence 4578999999999999999643 2222 89999999875431 1 123444444445555 6777776 899
Q ss_pred HHHHHHHHHhCcCEEEecH
Q 017781 288 GTDVFKALALGASGIFIGR 306 (366)
Q Consensus 288 ~~dv~kalalGAd~V~igr 306 (366)
.+++..|+.+||+.|++-.
T Consensus 167 ~eE~~~A~~lga~iIGinn 185 (452)
T 1pii_A 167 EEEQERAIALGAKVVGINN 185 (452)
T ss_dssp HHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHHCCCCEEEEeC
Confidence 9999999999999999864
No 300
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=93.65 E-value=0.36 Score=47.01 Aligned_cols=83 Identities=11% Similarity=-0.031 Sum_probs=63.9
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +++|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ ++||+
T Consensus 204 ~~e~v~avR~a~G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa 273 (410)
T 2gl5_A 204 GEARIAAMREAMGDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYEE--------PIHPLNSDNMQKVSRST--TIPIA 273 (410)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC--------SSCSSCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEEC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 457789999987 588888843 45555 5677777641 01234678888888887 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
+++.+.+..++.+++..| +|.|++-
T Consensus 274 ~dE~~~~~~~~~~~i~~~~~d~v~ik 299 (410)
T 2gl5_A 274 TGERSYTRWGYRELLEKQSIAVAQPD 299 (410)
T ss_dssp ECTTCCTTHHHHHHHHTTCCSEECCC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999988 7999884
No 301
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.63 E-value=0.046 Score=51.37 Aligned_cols=102 Identities=18% Similarity=0.172 Sum_probs=63.2
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+++++|||+--|=.+-
T Consensus 20 g~iD~~~l~~lv~~l--------------i~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t 85 (300)
T 3eb2_A 20 GRVRADVMGRLCDDL--------------IQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSV 85 (300)
T ss_dssp SCBCHHHHHHHHHHH--------------HHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCH
Confidence 345666666555432 56799999988766532211111 234566666677778998875454455
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLR 328 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~ 328 (366)
.++++ |-.+|||++++-.|+++.. .++++.++++.+.
T Consensus 86 ~~ai~la~~a~~~Gadavlv~~P~y~~~---~~~~l~~~f~~va 126 (300)
T 3eb2_A 86 ADAVAQAKLYEKLGADGILAILEAYFPL---KDAQIESYFRAIA 126 (300)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECCSSCC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCC---CHHHHHHHHHHHH
Confidence 55443 3458999999999987652 4566555544443
No 302
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=93.60 E-value=0.12 Score=46.60 Aligned_cols=75 Identities=23% Similarity=0.261 Sum_probs=50.0
Q ss_pred HHHHHHHHhcC-CCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH
Q 017781 215 KDVKWLQTITK-LPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 289 (366)
Q Consensus 215 ~~i~~lr~~~~-~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~ 289 (366)
+.++.+++.++ +-+....+.+.++ .++|||+|+..+ ...+.+ +.++.. .+++|. |+.|++
T Consensus 66 ~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~p~----------~d~~v~-~~~~~~--g~~~i~--G~~t~~ 130 (225)
T 1mxs_A 66 KAIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVTPG----------ITEDIL-EAGVDS--EIPLLP--GISTPS 130 (225)
T ss_dssp HHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEECSS----------CCHHHH-HHHHHC--SSCEEC--EECSHH
T ss_pred HHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEeCC----------CCHHHH-HHHHHh--CCCEEE--eeCCHH
Confidence 45777777773 3333334455554 999999996321 122333 333444 466665 499999
Q ss_pred HHHHHHHhCcCEEEe
Q 017781 290 DVFKALALGASGIFI 304 (366)
Q Consensus 290 dv~kalalGAd~V~i 304 (366)
++.+|+.+|||.|.+
T Consensus 131 e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 131 EIMMGYALGYRRFKL 145 (225)
T ss_dssp HHHHHHTTTCCEEEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 999999999999999
No 303
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.57 E-value=0.074 Score=49.69 Aligned_cols=86 Identities=16% Similarity=0.274 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHH
Q 017781 212 LSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTD 290 (366)
Q Consensus 212 ~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~d 290 (366)
.+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+++|||+--|=.+-.+
T Consensus 19 iD~~~l~~lv~~l--------------i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ 84 (291)
T 3a5f_A 19 VDFDKLSELIEWH--------------IKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAA 84 (291)
T ss_dssp BCHHHHHHHHHHH--------------HHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHH
T ss_pred cCHHHHHHHHHHH--------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHH
Confidence 6676666555432 56799999998876643211221 23456666666777899887666555565
Q ss_pred HHH----HHHhCcCEEEecHHHHHH
Q 017781 291 VFK----ALALGASGIFIGRPVVYS 311 (366)
Q Consensus 291 v~k----alalGAd~V~igr~~l~~ 311 (366)
+++ |-.+|||++++-.|+++.
T Consensus 85 ai~la~~a~~~Gadavlv~~P~y~~ 109 (291)
T 3a5f_A 85 SIAMSKWAESIGVDGLLVITPYYNK 109 (291)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 553 334799999999998754
No 304
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=93.55 E-value=0.86 Score=44.46 Aligned_cols=82 Identities=9% Similarity=-0.037 Sum_probs=64.4
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-.- ...++.+.++++.+ .+||+
T Consensus 199 ~~e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P----------~~d~~~~~~l~~~~--~iPIa 266 (409)
T 3go2_A 199 LRAHLEALRDGAGPDVEILLDLNFNAKPEGYLKILRELADFDLFWVEID----------SYSPQGLAYVRNHS--PHPIS 266 (409)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEECC----------CSCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCeEEEeC----------cCCHHHHHHHHhhC--CCCEE
Confidence 356789999987 578888843 45554 56788888631 13667788888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++.+.+..|+.+++..| +|.|++--
T Consensus 267 ~dE~~~~~~~~~~~i~~~~~d~v~~k~ 293 (409)
T 3go2_A 267 SCETLFGIREFKPFFDANAVDVAIVDT 293 (409)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEEEECH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEeCC
Confidence 999999999999999998 79998864
No 305
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=93.53 E-value=0.13 Score=49.66 Aligned_cols=86 Identities=20% Similarity=0.248 Sum_probs=55.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHH----HHHhCcCEEEecHHHHHHhh
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~k----alalGAd~V~igr~~l~~l~ 313 (366)
.+.|+|+|++.+..|-...-... ..+++..+++.+.+++|||+.-|=.+-.++++ |-.+|||++++-.|+++..
T Consensus 90 i~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY~k~- 168 (360)
T 4dpp_A 90 IQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKT- 168 (360)
T ss_dssp HHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-
T ss_pred HHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-
Confidence 57899999998876632211211 23456666667777899998555555555553 3347999999999976542
Q ss_pred hcCHHHHHHHHHHH
Q 017781 314 AEGEKGVRRVLEML 327 (366)
Q Consensus 314 ~~G~~gv~~~~~~l 327 (366)
.++++.+.++.+
T Consensus 169 --sq~gl~~hf~~I 180 (360)
T 4dpp_A 169 --SIEGLIAHFQSV 180 (360)
T ss_dssp --CHHHHHHHHHTT
T ss_pred --CHHHHHHHHHHH
Confidence 456655555444
No 306
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=93.47 E-value=0.26 Score=49.73 Aligned_cols=245 Identities=18% Similarity=0.199 Sum_probs=111.4
Q ss_pred hcccceeeecccc-CCCCCCccceeEc-CcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHh
Q 017781 41 NAFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (366)
Q Consensus 41 ~~f~~i~l~pr~l-~~~~~vd~st~l~-g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~ 118 (366)
-.|||+.|+|..- ...++|||+|.+- +.++..||+.|||.-.+ |..||.+.++.|...++. -++++|+.+
T Consensus 60 LTfDDVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDTVT------e~~MAIamAr~GGiGvIH--~n~sie~Qa 131 (556)
T 4af0_A 60 LTYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTVT------EDRMAIALALHGGLGIIH--HNCSAEEQA 131 (556)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTTTC------SHHHHHHHHHTTCEEEEC--CSSCHHHHH
T ss_pred CChhhEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCccccc------CHHHHHHHHHCCCeEEEc--CCCCHHHHH
Confidence 4799999999765 3446899999995 78999999999995433 889999999999999994 467777654
Q ss_pred cc------CCCceEEE-eeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCC----c-chhHHHhhh--c-----------
Q 017781 119 ST------GPGIRFFQ-LYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL----G-RREADIKNR--F----------- 173 (366)
Q Consensus 119 ~~------~~~~~~~Q-ly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~----g-~r~~d~~~~--~----------- 173 (366)
+. .. ..|+. -..-.....+.+.++..++.++.++.|+-+.... | .-.+|++-. .
T Consensus 132 ~~V~~VKr~e-~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~~V~evMT~~l 210 (556)
T 4af0_A 132 AMVRRVKKYE-NGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTTEV 210 (556)
T ss_dssp HHHHHHHHCC-C--------------------------------------------------------------------
T ss_pred HHHHHHHhcc-cCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccccccceEhhhhcccce
Confidence 31 11 12221 0111223445556666667777777765442110 0 011222210 0
Q ss_pred -CCCCccccccccccccCCCccccchhhHHHhhhc--cCCCCCHHHHHHHHHhc---------CCCEEEEeccCHHH---
Q 017781 174 -TLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQ--IDRSLSWKDVKWLQTIT---------KLPILVKGVLTAED--- 238 (366)
Q Consensus 174 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~i~~lr~~~---------~~pv~vK~v~~~~d--- 238 (366)
..|.++++.....+. .+.+...+ ..+... .-.-.+.+++...++.- .+.+..-...+.++
T Consensus 211 vt~~~~~~leeA~~iL----~~~kiekl-pVVd~~g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~VgAAVgv~~d~~eR 285 (556)
T 4af0_A 211 VTGSSPITLEKANSLL----RETKKGKL-PIVDSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDKDR 285 (556)
T ss_dssp ----------------------------------------------------CTTCCBCTTTCCBCCEEEECSSHHHHHH
T ss_pred EEecCCCCHHHHHHHH----HHccccce-eEEccCCcEEEEEEechhhhhhhCCcchhcchhhceeeEEEeccCccHHHH
Confidence 000000000000000 00000000 000000 00001223333222210 01122222233333
Q ss_pred ----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 239 ----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.++|+|.|++....|+ ....++.+..+++..+ +++||+ |.|.|++-+...+..|||+|-+|
T Consensus 286 ~~aLv~AGvD~iviD~ahGh----s~~v~~~i~~ik~~~p-~~~via-GNVaT~e~a~~Li~aGAD~vkVG 350 (556)
T 4af0_A 286 LKLLAEAGLDVVVLDSSQGN----SVYQIEFIKWIKQTYP-KIDVIA-GNVVTREQAAQLIAAGADGLRIG 350 (556)
T ss_dssp HHHHHHTTCCEEEECCSCCC----SHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCcEEEEeccccc----cHHHHHHHHHHHhhCC-cceEEe-ccccCHHHHHHHHHcCCCEEeec
Confidence 8999999999865443 2345678888887763 688777 88999999998889999999776
No 307
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=93.36 E-value=0.49 Score=45.97 Aligned_cols=84 Identities=8% Similarity=-0.073 Sum_probs=63.2
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--c-CHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--L-TAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~-~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
+.+.++.+|+.+ +.+|.+..- . +.++ .+.|+++|-- ...+..++.+.++++.+ .+||
T Consensus 191 d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPI 260 (394)
T 3mkc_A 191 VAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDLELYFAEA--------TLQHDDLSGHAKLVENT--RSRI 260 (394)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGGCCSEEES--------CSCTTCHHHHHHHHHHC--SSCB
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEEC--------CCCchhHHHHHHHHhhC--CCCE
Confidence 456788888887 567887743 3 5554 5678888741 11223577888888887 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++++.+.+..|+.+++..| +|.|++--
T Consensus 261 a~dE~~~~~~~~~~~l~~~~~d~v~~k~ 288 (394)
T 3mkc_A 261 CGAEMSTTRFEAEEWITKGKVHLLQSDY 288 (394)
T ss_dssp EECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred EeCCCCCCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999999999987 89999853
No 308
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=93.32 E-value=0.39 Score=46.71 Aligned_cols=83 Identities=12% Similarity=0.066 Sum_probs=63.9
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ ++||+
T Consensus 201 ~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa 270 (407)
T 2o56_A 201 GYDRMAAIRDAVGPDVDIIAEMHAFTDTTSAIQFGRMIEELGIFYYEE--------PVMPLNPAQMKQVADKV--NIPLA 270 (407)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC--------SSCSSSHHHHHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEeC--------CCChhhHHHHHHHHHhC--CCCEE
Confidence 457789999987 578888843 45555 5677777641 11234678888888887 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
+++.+.+..++.+++..| +|.|++-
T Consensus 271 ~dE~~~~~~~~~~~i~~~~~d~v~ik 296 (407)
T 2o56_A 271 AGERIYWRWGYRPFLENGSLSVIQPD 296 (407)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999988 8999884
No 309
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=93.26 E-value=0.32 Score=47.25 Aligned_cols=83 Identities=10% Similarity=0.041 Sum_probs=60.8
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcch-HHHHHHHHHHcCCCceE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGRIPV 279 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~-~~~l~~i~~~~~~~i~v 279 (366)
+.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- + ...+.. ++.+.++++.. .+||
T Consensus 185 d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------e-P~~~~d~~~~~~~l~~~~--~iPI 254 (392)
T 3ddm_A 185 DVRNALHVRELLGAATPLMADANQGWDLPRARQMAQRLGPAQLDWLE-------E-PLRADRPAAEWAELAQAA--PMPL 254 (392)
T ss_dssp HHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------C-CSCTTSCHHHHHHHHHHC--SSCE
T ss_pred HHHHHHHHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHhCCCEEE-------C-CCCccchHHHHHHHHHhc--CCCE
Confidence 345677788876 467777743 34444 566788774 1 112224 77888888877 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
+++..+.+..|+.+++..| +|.|++-
T Consensus 255 a~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 255 AGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp EECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999999999987 7999884
No 310
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=93.25 E-value=0.63 Score=44.71 Aligned_cols=84 Identities=13% Similarity=0.035 Sum_probs=60.5
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- + ...+..++.+.++++.. .+||+
T Consensus 174 d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~~~~~~~~l~~~~--~iPia 243 (370)
T 1chr_A 174 DLIHMEALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEALGVELIE-------Q-PVGRENTQALRRLSDNN--RVAIM 243 (370)
T ss_dssp HHHHHHHHHHHSSTTCCEEEECTTCCCTTHHHHHTHHHHTTTEEEEE-------C-CSCTTCHHHHHHHHHHS--CSEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCCcccHHHHHHHHhhC--CCCEE
Confidence 456678888877 367877733 23333 556777664 1 11233567788888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++.-+.+..|+.+++..| +|.|++--
T Consensus 244 ~dE~~~~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 244 ADESLSTLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp ESSSCCSHHHHHHHHTTTSCSEEEECT
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEEECc
Confidence 999999999999999987 89999863
No 311
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=93.16 E-value=0.35 Score=42.74 Aligned_cols=74 Identities=27% Similarity=0.289 Sum_probs=49.5
Q ss_pred HHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHH
Q 017781 215 KDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 290 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~d 290 (366)
+.++.+++ -++.+....+.+.++ .++|+|+++..+ ...+.+..++ .. .++++. |+.|.++
T Consensus 53 ~~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GAd~v~~~~----------~d~~v~~~~~-~~--g~~~i~--G~~t~~e 116 (207)
T 2yw3_A 53 EALKALRK-SGLLLGAGTVRSPKEAEAALEAGAAFLVSPG----------LLEEVAALAQ-AR--GVPYLP--GVLTPTE 116 (207)
T ss_dssp HHHHHHTT-SSCEEEEESCCSHHHHHHHHHHTCSEEEESS----------CCHHHHHHHH-HH--TCCEEE--EECSHHH
T ss_pred HHHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCCCEEEcCC----------CCHHHHHHHH-Hh--CCCEEe--cCCCHHH
Confidence 45677777 445555544455554 899999996422 1223333333 34 466665 3999999
Q ss_pred HHHHHHhCcCEEEe
Q 017781 291 VFKALALGASGIFI 304 (366)
Q Consensus 291 v~kalalGAd~V~i 304 (366)
+.+|+.+|||.|.+
T Consensus 117 ~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 117 VERALALGLSALKF 130 (207)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHCCCCEEEE
Confidence 99999999999998
No 312
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=93.14 E-value=0.14 Score=49.07 Aligned_cols=100 Identities=13% Similarity=0.124 Sum_probs=60.3
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 289 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~ 289 (366)
..++++.++++.+.. .+.|+|+|++.++.|-...-...-...+-+. .+.+++|||+--|=.+-.
T Consensus 42 g~ID~~~l~~lv~~l--------------i~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~ 105 (344)
T 2hmc_A 42 RTPDFDALVRKGKEL--------------IADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTA 105 (344)
T ss_dssp SSBCHHHHHHHHHHH--------------HHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHH
Confidence 456666665554432 5679999999887663221122222223233 345689988766655555
Q ss_pred HHHH----HHHhCcCEEEecHHHHHH-hhhcCHHHHHHHHHHHH
Q 017781 290 DVFK----ALALGASGIFIGRPVVYS-LAAEGEKGVRRVLEMLR 328 (366)
Q Consensus 290 dv~k----alalGAd~V~igr~~l~~-l~~~G~~gv~~~~~~l~ 328 (366)
++++ |-.+|||+|++-.|+++. . .++++.++++.+.
T Consensus 106 eai~la~~A~~~Gadavlv~~P~y~~~~---s~~~l~~~f~~IA 146 (344)
T 2hmc_A 106 SAVAHAVHAQKVGAKGLMVIPRVLSRGS---VIAAQKAHFKAIL 146 (344)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCSSSTT---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEECCCccCCCC---CHHHHHHHHHHHH
Confidence 5543 334899999999998764 2 3566655555443
No 313
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=93.14 E-value=0.46 Score=46.53 Aligned_cols=127 Identities=16% Similarity=0.125 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++=+.+..+..+. .+. .+ . . .+...
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~------~g~-~~-------------------~----~------~~~~~ 186 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAY------SGH-QL-------------------S----L------EVLDR 186 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTT------CCB-CC-------------------C----H------HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccc------ccc-cc-------------------c----h------hhHHH
Confidence 46777777788888889999988665432110 000 00 0 0 01122
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ .+||+
T Consensus 187 d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa 256 (412)
T 4e4u_A 187 CELFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRLEKYDPLWFEE--------PVPPGQEEAIAQVAKHT--SIPIA 256 (412)
T ss_dssp HHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCSSCHHHHHHHHHTC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCcEEEC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 456788899887 578888743 35554 5678888751 11223577888888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
++.-+.+..|+.+++..| +|.|++-
T Consensus 257 ~dE~~~~~~~~~~~i~~~a~d~v~~d 282 (412)
T 4e4u_A 257 TGERLTTKYEFHKLLQAGGASILQLN 282 (412)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred ecCccCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999999998 7999885
No 314
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=93.11 E-value=0.14 Score=46.57 Aligned_cols=58 Identities=26% Similarity=0.415 Sum_probs=39.3
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHH----------HHHHHHhCcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~d----------v~kalalGAd~V~igr~~ 308 (366)
.++|+|++++|.+ -+..+++.++.+. ++++.|||-..+ ..+++..|||.+.+||++
T Consensus 154 ~~~g~~GvV~s~~-------------e~~~ir~~~~~~f-l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~lVvGr~I 219 (239)
T 3tr2_A 154 KSAGLDGVVCSAQ-------------EAALLRKQFDRNF-LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYLVIGRPI 219 (239)
T ss_dssp HHHTCCEEECCHH-------------HHHHHHTTCCTTS-EEEECCBC----------CCBCHHHHHHHTCSEEEECHHH
T ss_pred HHcCCCEEEECch-------------hHHHHHHhcCCCc-EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEEEEChHH
Confidence 5779999987541 1234555554344 778899985432 557888999999999997
Q ss_pred HH
Q 017781 309 VY 310 (366)
Q Consensus 309 l~ 310 (366)
..
T Consensus 220 ~~ 221 (239)
T 3tr2_A 220 TQ 221 (239)
T ss_dssp HT
T ss_pred hC
Confidence 64
No 315
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=93.05 E-value=0.52 Score=45.87 Aligned_cols=140 Identities=14% Similarity=-0.022 Sum_probs=87.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
..+++.+.+.++++.+.||+++=+.++.+... .|. ..-|.+.. .+. .+....+..
T Consensus 131 ~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~---~~~---~~~~~~~~---------------~g~----~~~~~~~~~ 185 (401)
T 3sbf_A 131 SDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGV---PTD---LHTTQNPT---------------EGS----YYDQDQYMD 185 (401)
T ss_dssp ESSHHHHHHHHHHHHHTTCCEEEEEESCCCSC---GGG---SCCCSSCC---------------SSE----ECCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcc---ccc---cccccccc---------------ccc----cccchHHHH
Confidence 46778888888888889999998887653210 000 00000000 000 000000012
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
...+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-- . ..+..++.+.++++.+ .+||
T Consensus 186 ~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEq-------P-~~~~~~~~~~~l~~~~--~iPI 255 (401)
T 3sbf_A 186 NTLTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEVEQYKPYFIED-------I-LPPNQTEWLDNIRSQS--SVSL 255 (401)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC-------S-SCTTCGGGHHHHHTTC--CCCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC-------C-CChhHHHHHHHHHhhC--CCCE
Confidence 2456789999987 578888843 45554 5677777741 0 1122456677777766 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++++.+.+..|+.+++..| +|.|++--
T Consensus 256 a~dE~~~~~~~~~~~i~~~~~d~v~~k~ 283 (401)
T 3sbf_A 256 GLGELFNNPEEWKSLIANRRIDFIRCHV 283 (401)
T ss_dssp EECTTCCSHHHHHHHHHTTCCSEECCCG
T ss_pred EeCCccCCHHHHHHHHhcCCCCEEecCc
Confidence 9999999999999999987 79998864
No 316
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=93.03 E-value=0.37 Score=46.81 Aligned_cols=133 Identities=15% Similarity=0.047 Sum_probs=86.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC-CCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 134 DRNVVAQLVRRAERAGFKAIALTVDT-PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~vtvd~-p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
+.+.+.+.++++.+.|++++-+.+-. ...|.. |.-|. .+. . ...+...
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-------~~s~~-------~g~--------~---------~~~~~~~ 194 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSR-------EGVFL-------EGP--------L---------PSETIKI 194 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCC-------TTCCC-------SSS--------C---------CHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccc-------ccCcc-------cCC--------C---------chHHHHH
Confidence 77777788888889999999876420 000110 10010 000 0 0001123
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +++|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ ++||+
T Consensus 195 ~~e~v~avr~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~--------P~~~~d~~~~~~l~~~~--~iPIa 264 (403)
T 2ox4_A 195 GVERVEAIRNAVGPDVDIIVENHGHTDLVSAIQFAKAIEEFNIFFYEE--------INTPLNPRLLKEAKKKI--DIPLA 264 (403)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC--------CSCTTSTHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEeC--------CCChhhHHHHHHHHHhC--CCCEE
Confidence 456789999987 588888843 45555 5667776641 01223577788888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
+++.+.+..++.+++..| +|.|++--.
T Consensus 265 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 292 (403)
T 2ox4_A 265 SGERIYSRWGFLPFLEDRSIDVIQPDLG 292 (403)
T ss_dssp ECTTCCHHHHHHHHHHTTCCSEECCCHH
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecCcc
Confidence 999999999999999987 899998643
No 317
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=93.00 E-value=0.1 Score=47.42 Aligned_cols=58 Identities=22% Similarity=0.288 Sum_probs=41.9
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH----------HHHHHHHhCcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----------DVFKALALGASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~----------dv~kalalGAd~V~igr~~ 308 (366)
.+.|.++++.+. .+ +.++++..+ +.+++++|||+-.. .+.+++..|||.+.+||++
T Consensus 159 ~~~G~~g~V~~~------------~e-i~~lr~~~~-~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~I 224 (245)
T 1eix_A 159 QKCGLDGVVCSA------------QE-AVRFKQVFG-QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPV 224 (245)
T ss_dssp HHTTCSEEECCG------------GG-HHHHHHHHC-SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHHH
T ss_pred HHcCCCeEEeCH------------HH-HHHHHHhcC-CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHHH
Confidence 467888876432 23 556666554 45899999998531 3677888999999999998
Q ss_pred HH
Q 017781 309 VY 310 (366)
Q Consensus 309 l~ 310 (366)
+.
T Consensus 225 ~~ 226 (245)
T 1eix_A 225 TQ 226 (245)
T ss_dssp HT
T ss_pred cC
Confidence 64
No 318
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=92.98 E-value=0.69 Score=45.42 Aligned_cols=85 Identities=8% Similarity=-0.110 Sum_probs=65.1
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
...+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-- . ..+..++.+.++++.+ .+||
T Consensus 212 ~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq-------P-~~~~d~~~~~~l~~~~--~iPI 281 (425)
T 3vcn_A 212 SVPKLFERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLED-------S-VPAENQAGFRLIRQHT--TTPL 281 (425)
T ss_dssp TTHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC-------C-SCCSSTTHHHHHHHHC--CSCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC-------C-CChhhHHHHHHHHhcC--CCCE
Confidence 3577899999987 578888743 45555 6778888851 1 1122456778888877 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++++.+.+..|+.+++..| +|.|++--
T Consensus 282 a~dE~~~~~~~~~~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 282 AVGEIFAHVWDAKQLIEEQLIDYLRATV 309 (425)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EeCCCcCCHHHHHHHHHcCCCCeEecCh
Confidence 9999999999999999988 89998864
No 319
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.84 E-value=0.19 Score=50.37 Aligned_cols=250 Identities=15% Similarity=0.196 Sum_probs=105.2
Q ss_pred cccceeeeccccC-CCCCCccceeEc-CcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhc
Q 017781 42 AFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS 119 (366)
Q Consensus 42 ~f~~i~l~pr~l~-~~~~vd~st~l~-g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~ 119 (366)
.||++.|+|..-. ..+++|++|.+- +..+..|++.|||...+ +..+|.+.++.|...++.. +.+.++.++
T Consensus 11 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~M~tVT------e~~lA~ala~~GGiGvI~~--~~~~e~~a~ 82 (490)
T 4avf_A 11 TFDDVLLIPGYSEVLPKDVSLKTRLTRGIELNIPLVSAAMDTVT------EARLAIAMAQEGGIGIIHK--NMGIEQQAA 82 (490)
T ss_dssp CGGGEEECCCCBCSCGGGSCCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTSEEEECC--SSCHHHHHH
T ss_pred CcceEEEeCCCCcccccceeeecccccCcccCCCccccchhhhC------HHHHHHHHHHcCCCccccC--CCCHHHHHH
Confidence 5999999997653 345799999886 67899999999996543 6788888888887777752 455554332
Q ss_pred c------CCCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCc-chhHHHhhhc--CCCCccccc---ccccc
Q 017781 120 T------GPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLG-RREADIKNRF--TLPPFLTLK---NFQGL 187 (366)
Q Consensus 120 ~------~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g-~r~~d~~~~~--~~p~~~~~~---~~~~~ 187 (366)
. ......-....-.......+.++...+.++..+.|.=+--..| -..+|++... ..|..-.+. ++.-.
T Consensus 83 ~v~~vk~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~~~~~~~~V~~vMtp~~~~vtv 162 (490)
T 4avf_A 83 EVRKVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRVKPNAGDTVAAIMTPKDKLVTA 162 (490)
T ss_dssp HHHHHHHCCC----------------------------------------------------------------------
T ss_pred HhhhhcccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhhccccCCcHHHHhccCCCCEEE
Confidence 1 1110000111111223345555566666666554421110001 0112222100 000000000 00000
Q ss_pred ccC-CCccc----cchhhH--HHhhhc--cCCCCCHHHHHHHHHh------cCCCEEEE--eccCH--HH-----HHcCC
Q 017781 188 DLG-KMDEA----NDSGLA--AYVAGQ--IDRSLSWKDVKWLQTI------TKLPILVK--GVLTA--ED-----VQAGA 243 (366)
Q Consensus 188 ~~~-~~~~~----~~~~~~--~~~~~~--~d~~~~~~~i~~lr~~------~~~pv~vK--~v~~~--~d-----~~aGa 243 (366)
... .+.+. ...... ..+... .-.-.+.+++.+.++. .+..+.+. ...+. .+ .++|+
T Consensus 163 ~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~p~a~kd~~grl~v~aavG~~~~~~~~a~~l~~aG~ 242 (490)
T 4avf_A 163 REGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTYPLASKDEQGRLRVGAAVGTGADTGERVAALVAAGV 242 (490)
T ss_dssp --------------------------------------------CTTCCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTC
T ss_pred CCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccCcchhhhccCcceeeeeeccccchHHHHHHHhhccc
Confidence 000 00000 000000 000000 0011122332222111 01122222 11221 11 88999
Q ss_pred cEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 244 AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 244 d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
|.|++....|. ....++.+.++++..+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 243 d~I~id~a~g~----~~~~~~~v~~i~~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 243 DVVVVDTAHGH----SKGVIERVRWVKQTFP-DVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp SEEEEECSCCS----BHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred ceEEecccCCc----chhHHHHHHHHHHHCC-CceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 99998653331 3345678888888764 588888 77999999999999999999985
No 320
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=92.80 E-value=0.3 Score=46.77 Aligned_cols=117 Identities=15% Similarity=0.100 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++-+.+++. +..
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~~-------------------------------------------------~~~ 169 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCGD-------------------------------------------------EEQ 169 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSC-------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCC-------------------------------------------------HHH
Confidence 5677777777777788999987765421 112
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- +. ..+..++.+.++++.. .+||+
T Consensus 170 d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPIa 239 (356)
T 3ro6_B 170 DFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGIEFIE-------QP-FPAGRTDWLRALPKAI--RRRIA 239 (356)
T ss_dssp HHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTCCCEE-------CC-SCTTCHHHHHTSCHHH--HHTEE
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CCCCcHHHHHHHHhcC--CCCEE
Confidence 345567777775 466777632 34443 556777774 11 1223567777777766 69999
Q ss_pred EecCCCCHHHHHHHHHhC--cCEEEecHHH
Q 017781 281 LDGGVRRGTDVFKALALG--ASGIFIGRPV 308 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG--Ad~V~igr~~ 308 (366)
++.-+.+..|+.+++..| +|.|++--..
T Consensus 240 ~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~ 269 (356)
T 3ro6_B 240 ADESLLGPADAFALAAPPAACGIFNIKLMK 269 (356)
T ss_dssp ESTTCCSHHHHHHHHSSSCSCSEEEECHHH
T ss_pred eCCcCCCHHHHHHHHhcCCcCCEEEEcccc
Confidence 999999999999999976 8999987543
No 321
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=92.75 E-value=0.31 Score=44.98 Aligned_cols=38 Identities=26% Similarity=0.228 Sum_probs=31.0
Q ss_pred CHHHHHHHHHhcCCCEEEEec-cCHHH----HHcCCcEEEEcC
Q 017781 213 SWKDVKWLQTITKLPILVKGV-LTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v-~~~~d----~~aGad~I~vs~ 250 (366)
..+.++++|+.+++|+++-+. .++++ .++|||+++|..
T Consensus 194 ~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 194 IENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGS 236 (267)
T ss_dssp HHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 356799999999999999865 46777 689999999843
No 322
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=92.74 E-value=1.1 Score=42.75 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=37.1
Q ss_pred chHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 261 ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 261 ~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
..++.+.++++.+ .+||++++.+.+..++.+++..| +|.|++-
T Consensus 220 ~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 263 (368)
T 1sjd_A 220 EDVLGHAELARRI--QTPICLDESIVSARAAADAIKLGAVQIVNIK 263 (368)
T ss_dssp TCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred hhHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHcCCCCEEEec
Confidence 3577777887766 79999999999999999999988 7999983
No 323
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=92.72 E-value=1.5 Score=41.43 Aligned_cols=42 Identities=24% Similarity=0.203 Sum_probs=37.8
Q ss_pred chHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEe
Q 017781 261 ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFI 304 (366)
Q Consensus 261 ~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~i 304 (366)
..++.+.++++.+ ++||++++.+.+..|+.+.+..| +|.|++
T Consensus 222 ~~~~~~~~l~~~~--~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 222 EDIEGLKFVRFHS--PFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp TCHHHHHHHHHHS--SSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred ccHHHHHHHHHhC--CCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 4577888888877 79999999999999999999988 899999
No 324
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=92.70 E-value=0.78 Score=41.11 Aligned_cols=124 Identities=19% Similarity=0.132 Sum_probs=79.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEec-CCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR 210 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtv-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 210 (366)
..|.....+.++++++.|++.+-+.+ |.+ | +| .-
T Consensus 13 a~D~~~l~~~i~~~~~~Gad~ihldi~DG~------------f-vp--------------------------------~~ 47 (230)
T 1tqj_A 13 SADFSRLGEEIKAVDEAGADWIHVDVMDGR------------F-VP--------------------------------NI 47 (230)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSS------------S-SS--------------------------------CB
T ss_pred ecCHhHHHHHHHHHHHcCCCEEEEEEEecC------------C-Cc--------------------------------ch
Confidence 35677778889999999999875543 111 0 01 11
Q ss_pred CCCHHHHHHHHHhcCCCEEEEec-cCHH----H-HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecC
Q 017781 211 SLSWKDVKWLQTITKLPILVKGV-LTAE----D-VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 284 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~~pv~vK~v-~~~~----d-~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GG 284 (366)
.+..+.++.+|+.++.|+.+-.. .+++ . .++|||+|+++..-.. .......+..+++. .+.+..+=.
T Consensus 48 ~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~e~~~----~~~~~~~~~~i~~~---g~~~gv~~~ 120 (230)
T 1tqj_A 48 TIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNA----SPHLHRTLCQIREL---GKKAGAVLN 120 (230)
T ss_dssp CBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEECSTTT----CTTHHHHHHHHHHT---TCEEEEEEC
T ss_pred hhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECccccc----chhHHHHHHHHHHc---CCcEEEEEe
Confidence 23457899999988888885543 4433 2 9999999998642000 11233445444432 344544446
Q ss_pred CCCHHHHHHHHHhCcCEEEecHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~ 307 (366)
..|+.+.++++..++|.|.+++-
T Consensus 121 p~t~~e~~~~~~~~~D~v~~msv 143 (230)
T 1tqj_A 121 PSTPLDFLEYVLPVCDLILIMSV 143 (230)
T ss_dssp TTCCGGGGTTTGGGCSEEEEESS
T ss_pred CCCcHHHHHHHHhcCCEEEEEEe
Confidence 67888889999899999988864
No 325
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=92.70 E-value=5.4 Score=36.95 Aligned_cols=175 Identities=18% Similarity=0.186 Sum_probs=95.6
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHHH
Q 017781 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (366)
Q Consensus 73 Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~~ 138 (366)
|.++.|+.-.+-...++-..+++-.-+.|+...+ + ++.+.+.+|..+ . .+ .|.+...- ..+.+..
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 91 (297)
T 3flu_A 13 VALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEA 91 (297)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 4455666422222223334666667778876443 3 334566665432 1 12 35666654 3466677
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHH
Q 017781 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVK 218 (366)
Q Consensus 139 ~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 218 (366)
.++.++++++|++++.+. +|... + | ..+-..+..+
T Consensus 92 i~la~~a~~~Gadavlv~--~P~y~-~----------~--------------------------------~~~~l~~~f~ 126 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSV--VPYYN-K----------P--------------------------------SQEGIYQHFK 126 (297)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCSS-C----------C--------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC--CCCCC-C----------C--------------------------------CHHHHHHHHH
Confidence 788999999999998873 23210 0 0 0000123455
Q ss_pred HHHHhcCCCEEEEec-------cCHHH-HHc-C---CcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCC
Q 017781 219 WLQTITKLPILVKGV-------LTAED-VQA-G---AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 286 (366)
Q Consensus 219 ~lr~~~~~pv~vK~v-------~~~~d-~~a-G---ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~ 286 (366)
.+.+.+++||++=.+ .+++. .+. . +-+|.-+. ..+..+.++.+..++++.| .+|
T Consensus 127 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiKdss----------gd~~~~~~~~~~~~~~f~v-~~G--- 192 (297)
T 3flu_A 127 TIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVKEAS----------GNIGSNIELINRAPEGFVV-LSG--- 192 (297)
T ss_dssp HHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHSCTTCEE-EEC---
T ss_pred HHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHhcCCCeEE-EEC---
Confidence 566667888887754 23333 111 1 11222111 2345555666666556665 445
Q ss_pred CHHHHHHHHHhCcCEEEecHH
Q 017781 287 RGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~igr~ 307 (366)
+..-++.++++||+++.-+..
T Consensus 193 ~d~~~l~~l~~G~~G~is~~a 213 (297)
T 3flu_A 193 DDHTALPFMLCGGHGVITVAA 213 (297)
T ss_dssp CGGGHHHHHHTTCCEEEESGG
T ss_pred cHHHHHHHHhCCCCEEEechH
Confidence 234577899999999987764
No 326
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=92.67 E-value=0.53 Score=46.25 Aligned_cols=140 Identities=16% Similarity=0.008 Sum_probs=88.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
..+++.+.+.++++.+.|++++=+.++..... .+. ..-|.+.. .+ .+.....+..
T Consensus 152 ~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~---~~~---~~~~~~~~---------------~~----~~~~~~~~~~ 206 (422)
T 3tji_A 152 GETLEALFASVDALIAQGYRHIRCQLGFYGGT---PSA---LHAPDNPT---------------PG----AWFDQQEYMS 206 (422)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBC---GGG---SCCCSSCC---------------SS----EECCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcc---ccc---cccccccc---------------cc----ccccchhHHH
Confidence 46778888888888889999998877643110 000 00000000 00 0000000011
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
...+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|- + ...+..++.+.++++.+ .+||
T Consensus 207 ~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPI 276 (422)
T 3tji_A 207 NTVEMFHALREKYGWKLHILHDVHERLFPQQAVQLAKQLEPFQPYFIE-------D-ILPPQQSAWLEQVRQQS--CVPL 276 (422)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------C-CSCGGGGGGHHHHHHHC--CCCE
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEE-------C-CCChhhHHHHHHHHhhC--CCCE
Confidence 2456789999987 578888843 45554 567888774 1 11223566778888877 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++.-+.+..|+.+++..| +|.|++--
T Consensus 277 a~dE~~~~~~~~~~ll~~ga~d~v~~k~ 304 (422)
T 3tji_A 277 ALGELFNNPAEWHDLIVNRRIDFIRCHV 304 (422)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCG
T ss_pred EEeCCcCCHHHHHHHHhcCCCCEEecCc
Confidence 9999999999999999987 79998854
No 327
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=92.64 E-value=0.16 Score=49.59 Aligned_cols=60 Identities=27% Similarity=0.377 Sum_probs=45.7
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.++|+|.|++..+.|. .....+.+.++++.. .+||++ |++.+.+++.+++.+|||+|.+|
T Consensus 153 veaGvdvIvldta~G~----~~~~~e~I~~ik~~~--~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 153 VEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp HHHTCSEEEECCSCCS----BHHHHHHHHHHHTTC--CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHcCCCEEEEeCCCCC----cccHHHHHHHHHhcC--CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 8999999988543221 112356677776655 688887 77999999999999999999996
No 328
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=92.58 E-value=0.14 Score=46.40 Aligned_cols=58 Identities=22% Similarity=0.328 Sum_probs=41.5
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHH----------HHHHHHhCcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~d----------v~kalalGAd~V~igr~~ 308 (366)
.+.|.++++.+. +.+.++++..+ ..+++++|||+-... ..+++..|||.+.+||++
T Consensus 152 ~~~G~~g~v~~~-------------~~i~~lr~~~~-~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvGr~I 217 (239)
T 1dbt_A 152 EESGLDGVVCSV-------------HEAKAIYQAVS-PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSI 217 (239)
T ss_dssp HHTTCSEEECCG-------------GGHHHHTTTSC-TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEECHHH
T ss_pred HHhCCCEEEECH-------------HHHHHHHHhcC-CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEChhh
Confidence 467888876432 23344554443 468999999986544 477889999999999998
Q ss_pred HH
Q 017781 309 VY 310 (366)
Q Consensus 309 l~ 310 (366)
+.
T Consensus 218 ~~ 219 (239)
T 1dbt_A 218 TK 219 (239)
T ss_dssp HT
T ss_pred cC
Confidence 64
No 329
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=92.55 E-value=0.43 Score=46.77 Aligned_cols=149 Identities=13% Similarity=-0.006 Sum_probs=89.3
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
..+++.+.+.++++.+.||+++=+.++.|.... ..+..-. +.... .......+...+.. ..+..
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~-----~~g~~~~-~~~~~---------~~~~~~p~~~~~~~-~~~~~ 204 (418)
T 3r4e_A 141 GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKD-----AYGVGRG-KLYYE---------PADASLPSVTGWDT-RKALN 204 (418)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC---------------------------------CCCCEEEECH-HHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCccccc-----ccccccc-ccccc---------cccccccccccccc-hhHHH
Confidence 467888888888888899999999887653100 0000000 00000 00000000000000 00011
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
...+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|- +. ..+..++.+.++++.+ .+||
T Consensus 205 ~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~iPI 274 (418)
T 3r4e_A 205 YVPKLFEELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLE-------DC-TPAENQEAFRLVRQHT--VTPL 274 (418)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------SC-SCCSSGGGGHHHHHHC--CSCE
T ss_pred HHHHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCccCHHHHHHHHhcC--CCCE
Confidence 2456789999987 578888843 45554 677888885 11 1122456677888877 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++++-+.+..|+.+++..| +|.|++--
T Consensus 275 a~dE~~~~~~~~~~~l~~~a~d~v~~k~ 302 (418)
T 3r4e_A 275 AVGEIFNTIWDAKDLIQNQLIDYIRATV 302 (418)
T ss_dssp EECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EEcCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999999999988 89998864
No 330
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=92.44 E-value=0.57 Score=45.61 Aligned_cols=84 Identities=14% Similarity=0.088 Sum_probs=63.3
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +++|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ ++||+
T Consensus 196 ~~e~v~avRea~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa 265 (410)
T 2qq6_A 196 MVARVAAVREAVGPEVEVAIDMHGRFDIPSSIRFARAMEPFGLLWLEE--------PTPPENLDALAEVRRST--STPIC 265 (410)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHTTC--SSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCeEEC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 456788999887 578888743 45555 5678887741 01223577888888776 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++.+.+..++.+++..| +|.|++--
T Consensus 266 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 292 (410)
T 2qq6_A 266 AGENVYTRFDFRELFAKRAVDYVMPDV 292 (410)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCBH
T ss_pred eCCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 999999999999999987 89999853
No 331
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=92.41 E-value=1.4 Score=39.01 Aligned_cols=124 Identities=16% Similarity=0.133 Sum_probs=78.0
Q ss_pred EeeecCCHHHHHHHHHHHHHcCCCEEEEec-CCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhh
Q 017781 128 QLYVYKDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAG 206 (366)
Q Consensus 128 Qly~~~d~~~~~~~l~ra~~~G~~ai~vtv-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (366)
......|.....+.++.+.+.|++.+-+.+ |.+. +|
T Consensus 15 p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f-------------~~------------------------------ 51 (230)
T 1rpx_A 15 PSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRF-------------VP------------------------------ 51 (230)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSS-------------SS------------------------------
T ss_pred EEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCc-------------cc------------------------------
Confidence 334457777788889999999998876654 2110 00
Q ss_pred ccCCCCCHHHHHHHHHhcCCCEEEEeccC-HHH-----HHcCCcEEEEcCC--CccCCCCCcchHHHHHHHHHHcCCCce
Q 017781 207 QIDRSLSWKDVKWLQTITKLPILVKGVLT-AED-----VQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIP 278 (366)
Q Consensus 207 ~~d~~~~~~~i~~lr~~~~~pv~vK~v~~-~~d-----~~aGad~I~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~i~ 278 (366)
......+.++++++.++.|+.+-...+ +++ .++|+|+|.++.. .. ....+.+..+.+. .+.
T Consensus 52 --~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~~------~~~~~~~~~~~~~---g~~ 120 (230)
T 1rpx_A 52 --NITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSST------IHLHRTINQIKSL---GAK 120 (230)
T ss_dssp --CBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTTC------SCHHHHHHHHHHT---TSE
T ss_pred --ccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCccc------hhHHHHHHHHHHc---CCc
Confidence 011346788999998777877765433 332 8899999998664 21 1223444444432 345
Q ss_pred EEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 279 VFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 279 vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
++.+---.+..+.++++..++|.|.+.
T Consensus 121 ig~~~~p~t~~e~~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 121 AGVVLNPGTPLTAIEYVLDAVDLVLIM 147 (230)
T ss_dssp EEEEECTTCCGGGGTTTTTTCSEEEEE
T ss_pred EEEEeCCCCCHHHHHHHHhhCCEEEEE
Confidence 555533456777788888899998544
No 332
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=92.34 E-value=0.47 Score=41.53 Aligned_cols=76 Identities=20% Similarity=0.213 Sum_probs=51.9
Q ss_pred HHHHHHHHHhcCCCEEEEe--ccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC
Q 017781 214 WKDVKWLQTITKLPILVKG--VLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 287 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~vK~--v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~ 287 (366)
.+.++.+++.++.|+++.. +.+.++ .++|+|+|.+.. ...+.+ +.++.. ..+++.. +.+
T Consensus 46 ~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~----------~~~~~~-~~~~~~--g~~~~~g--~~t 110 (212)
T 2v82_A 46 EQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPN----------IHSEVI-RRAVGY--GMTVCPG--CAT 110 (212)
T ss_dssp HHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEECSS----------CCHHHH-HHHHHT--TCEEECE--ECS
T ss_pred HHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEeCC----------CCHHHH-HHHHHc--CCCEEee--cCC
Confidence 4567888887788888853 344444 899999996321 122333 333344 3555543 899
Q ss_pred HHHHHHHHHhCcCEEEe
Q 017781 288 GTDVFKALALGASGIFI 304 (366)
Q Consensus 288 ~~dv~kalalGAd~V~i 304 (366)
..++.++..+|+|.|.+
T Consensus 111 ~~e~~~a~~~G~d~v~v 127 (212)
T 2v82_A 111 ATEAFTALEAGAQALKI 127 (212)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCCEEEE
Confidence 99999999999999997
No 333
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=92.14 E-value=0.59 Score=45.04 Aligned_cols=84 Identities=13% Similarity=0.056 Sum_probs=58.7
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- + ...+..++.+.++++.. .+||++
T Consensus 178 ~~~v~avR~~~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~ipIa~ 247 (377)
T 3my9_A 178 LRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIE-------Q-PVPRRHLDAMAGFAAAL--DTPILA 247 (377)
T ss_dssp HHHHHHHHHHHGGGSEEEEECTTCCCTTTHHHHHHHHHTTCCSCEE-------C-CSCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCEEE-------C-CCCccCHHHHHHHHHhC--CCCEEE
Confidence 45677777765 466776632 22222 455666663 1 11223577888888877 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
+.-+.+..|+.+++..| +|.|++--.
T Consensus 248 dE~~~~~~~~~~~i~~~~~d~v~~k~~ 274 (377)
T 3my9_A 248 DESCFDAVDLMEVVRRQAADAISVKIM 274 (377)
T ss_dssp STTCSSHHHHHHHHHHTCCSEEECCHH
T ss_pred CCccCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999999999987 899988643
No 334
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.08 E-value=0.27 Score=49.41 Aligned_cols=243 Identities=16% Similarity=0.216 Sum_probs=130.2
Q ss_pred cccceeeeccccC-CCCCCccceeEc-CcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHhc
Q 017781 42 AFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS 119 (366)
Q Consensus 42 ~f~~i~l~pr~l~-~~~~vd~st~l~-g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~~ 119 (366)
.||++.|+|..-. ..+++|++|.+- +..+..|++.|||...+ +..+|.+.++.|...+++ .+.+.++.++
T Consensus 12 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtVT------e~~ma~a~a~~GGiGvI~--~n~s~e~qa~ 83 (496)
T 4fxs_A 12 TFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIH--KNMSIEQQAA 83 (496)
T ss_dssp CGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHHTCEEEEC--SSSCHHHHHH
T ss_pred CcccEEEecCccccccccccccceeccccccCCCceecCcchhh------HHHHHHHHHHcCCcceec--CCCCHHHHHH
Confidence 4999999997653 345899999886 67899999999996543 678888888888877775 3555554322
Q ss_pred -------cCC----CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCC-Cc-chhHHHhhhcCCCCccccccccc
Q 017781 120 -------TGP----GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR-LG-RREADIKNRFTLPPFLTLKNFQG 186 (366)
Q Consensus 120 -------~~~----~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~-~g-~r~~d~~~~~~~p~~~~~~~~~~ 186 (366)
... .+.++ .......+.++...+.++..+.|.=+.-. .| -..+|++... .....+..+..
T Consensus 84 ~V~~Vk~~~~~m~~d~v~v-----~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~--~~~~~v~diM~ 156 (496)
T 4fxs_A 84 QVHQVKIFEAGVVTHPVTV-----RPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFVT--DLTKSVAAVMT 156 (496)
T ss_dssp HHHHHHHCCC--CBCCCCB-----CSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCC--CTTSBGGGTSE
T ss_pred HHHhccccccccccCceEE-----CCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcc--cCCCcHHHHhc
Confidence 111 22222 22234566777777888888776532100 01 1234444111 00001110000
Q ss_pred -cc-cCCCcc-ccchhhHHH-----------hhhc--cCCCCCHHHHHHHHHh------cCCCEEEEec--c---CHHH-
Q 017781 187 -LD-LGKMDE-ANDSGLAAY-----------VAGQ--IDRSLSWKDVKWLQTI------TKLPILVKGV--L---TAED- 238 (366)
Q Consensus 187 -~~-~~~~~~-~~~~~~~~~-----------~~~~--~d~~~~~~~i~~lr~~------~~~pv~vK~v--~---~~~d- 238 (366)
.. ...+.. .......+. +... ...-.+.+++....+. .+..+.+... . ..+.
T Consensus 157 p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p~a~~d~~grL~v~aavG~~~d~~~~a 236 (496)
T 4fxs_A 157 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERV 236 (496)
T ss_dssp EGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCTTCCBCTTSCBCCEEECCSSSCCHHHH
T ss_pred CCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhcccchhhhcccceeeeeeeccccchHHHH
Confidence 00 000000 000000000 0000 0011133333222111 1123333321 1 1222
Q ss_pred ---HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 239 ---VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ---~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.++|+|.|++....| .....++.+.++++..+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 237 ~~l~~aG~d~I~id~a~g----~~~~~~~~i~~ir~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 237 KALVEAGVDVLLIDSSHG----HSEGVLQRIRETRAAYP-HLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCT-TCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHhccCceEEeccccc----cchHHHHHHHHHHHHCC-CceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 889999999875432 12345678888888764 688888 77999999999999999999986
No 335
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=92.00 E-value=1.5 Score=42.52 Aligned_cols=44 Identities=18% Similarity=0.173 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 262 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
.++.+.++++.+ .+||+++.-+.+..|+.+++..| +|.|++--.
T Consensus 243 d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~ 287 (400)
T 3mwc_A 243 ALLDLKELGERI--ETPICLDESLISSRVAEFVAKLGISNIWNIKIQ 287 (400)
T ss_dssp CHHHHHHHHHHS--SSCEEESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred hHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcch
Confidence 577888888877 79999999999999999999987 799998643
No 336
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=91.97 E-value=0.3 Score=49.17 Aligned_cols=61 Identities=18% Similarity=0.274 Sum_probs=47.7
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.++|+|+|.++...|. ....++.+.++++.++ ++||++ |++.+.+++.++..+|||++.+|
T Consensus 264 ~~aG~d~v~i~~~~G~----~~~~~~~i~~i~~~~~-~~pvi~-~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 264 TQAGVDVIVLDSSQGN----SVYQIAMVHYIKQKYP-HLQVIG-GNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHTTCSEEEECCSCCC----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHcCCCEEEeeccCCc----chhHHHHHHHHHHhCC-CCceEe-cccchHHHHHHHHHcCCCEEEEC
Confidence 8899999998543331 1234678888888773 688886 77999999999999999999773
No 337
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=91.93 E-value=0.71 Score=45.34 Aligned_cols=84 Identities=8% Similarity=-0.121 Sum_probs=63.9
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-- . ..+..++.+.++++.+ .+||+
T Consensus 212 d~e~v~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq-------P-~~~~d~~~~~~l~~~~--~iPIa 281 (424)
T 3v3w_A 212 IPDVFAAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWMED-------A-VPAENQESFKLIRQHT--TTPLA 281 (424)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC-------C-SCCSSTTHHHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEC-------C-CChHhHHHHHHHHhhC--CCCEE
Confidence 456789999987 578888843 45555 6778888851 1 1122456778888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+++.+.+..|+.++++.| +|.|++--
T Consensus 282 ~dE~~~~~~~~~~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 282 VGEVFNSIHDCRELIQNQWIDYIRTTI 308 (424)
T ss_dssp ECTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred EccCcCCHHHHHHHHHcCCCCeEeecc
Confidence 999999999999999998 79998864
No 338
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.74 E-value=0.6 Score=47.06 Aligned_cols=243 Identities=16% Similarity=0.166 Sum_probs=133.5
Q ss_pred cccceeeeccccC-CCCCCccceeEc-CcccCCceEecccccccccCChhhHHHHHHHHHcCCceecCCCCCCCHHHHh-
Q 017781 42 AFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA- 118 (366)
Q Consensus 42 ~f~~i~l~pr~l~-~~~~vd~st~l~-g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~~~e~i~- 118 (366)
.||++.|+|..-. ..+++|++|.+- +..+..|++.|||...+ +..+|.+.++.|...++.. +.++++..
T Consensus 36 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtvT------e~~lAia~a~~GgiGvIh~--~~~~~~q~~ 107 (511)
T 3usb_A 36 TFDDVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGMDTVT------EADMAIAMARQGGLGIIHK--NMSIEQQAE 107 (511)
T ss_dssp CGGGEEECCCCCCCCTTTSBCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTCEEEECS--SSCHHHHHH
T ss_pred ceEEEEEECCcccccccceEeeeEeecccccCCCccccCchhhc------HHHHHHHHHhcCCceeecc--cCCHHHHHH
Confidence 5999999997642 446799999876 57899999999996433 7788888888888877753 44454322
Q ss_pred ---c---cC----CCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecC--CC-CCc-chhHHHhhhcCCCCccccccc
Q 017781 119 ---S---TG----PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD--TP-RLG-RREADIKNRFTLPPFLTLKNF 184 (366)
Q Consensus 119 ---~---~~----~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd--~p-~~g-~r~~d~~~~~~~p~~~~~~~~ 184 (366)
+ .. +.+.+ + .......+.++...+.++..+.|.=+ .- ..| -..+|++... .....+..+
T Consensus 108 ~V~~V~~~~~~m~~d~v~--l---~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~--~~~~~V~~v 180 (511)
T 3usb_A 108 QVDKVKRSESGVISDPFF--L---TPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQ--DYSIKISDV 180 (511)
T ss_dssp HHHHHHTSSSCSSSSCCC--B---CTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTCC--CSSSBHHHH
T ss_pred HHHHhhccccccccCCEE--E---CCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhhc--cCCCcHHHh
Confidence 1 11 11222 2 22334566777788888988877532 10 011 1234443210 000000000
Q ss_pred ccc-ccCCCcc-ccchhhHHHhhhc-------cC------CCCCHHH-HHHHHHh-------cCCCEEEEeccCH---HH
Q 017781 185 QGL-DLGKMDE-ANDSGLAAYVAGQ-------ID------RSLSWKD-VKWLQTI-------TKLPILVKGVLTA---ED 238 (366)
Q Consensus 185 ~~~-~~~~~~~-~~~~~~~~~~~~~-------~d------~~~~~~~-i~~lr~~-------~~~pv~vK~v~~~---~d 238 (366)
..- ....+.. .......+.+... .| .-.+.++ ++.+... ..+++.+....+. +.
T Consensus 181 M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~er 260 (511)
T 3usb_A 181 MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTR 260 (511)
T ss_dssp CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHH
T ss_pred cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHH
Confidence 000 0000000 0000000000000 00 1124444 3443321 1233444433222 22
Q ss_pred ----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 239 ----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.++|+|.|++....| .....++.+.++++..+ ++||++ |+|.+.+++.++..+|||+|.+|
T Consensus 261 a~aLveaGvd~I~Id~a~g----~~~~v~~~i~~i~~~~~-~~~vi~-g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 261 IDALVKASVDAIVLDTAHG----HSQGVIDKVKEVRAKYP-SLNIIA-GNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHhhccceEEeccccc----chhhhhhHHHHHHHhCC-CceEEe-eeeccHHHHHHHHHhCCCEEEEC
Confidence 899999999865332 12345678888887763 577775 78999999999999999999874
No 339
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=91.61 E-value=1.9 Score=41.54 Aligned_cols=117 Identities=18% Similarity=0.108 Sum_probs=76.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++=+.++.. +..
T Consensus 141 ~~~e~~~~~a~~~~~~Gf~~~KlK~g~~-------------------------------------------------~~~ 171 (379)
T 3r0u_A 141 GNVAETIQNIQNGVEANFTAIKVKTGAD-------------------------------------------------FNR 171 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSC-------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeecCCC-------------------------------------------------HHH
Confidence 4667666777777778999887655421 111
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HH--cCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCce
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP 278 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~--aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~ 278 (366)
+.+.++.+|+.+ +.++.+..- .+.++ .+ .++++|- + ...+..++.+.++++.. .+|
T Consensus 172 d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iE-------e-P~~~~d~~~~~~l~~~~--~iP 241 (379)
T 3r0u_A 172 DIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSLNVEIIE-------Q-PVKYYDIKAMAEITKFS--NIP 241 (379)
T ss_dssp HHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCCCEEEEE-------C-CSCTTCHHHHHHHHHHC--SSC
T ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEE-------C-CCCcccHHHHHHHHhcC--CCC
Confidence 344566666665 355666522 33433 33 3555553 1 11223577888888877 799
Q ss_pred EEEecCCCCHHHHHHHHHhC-cCEEEecHHH
Q 017781 279 VFLDGGVRRGTDVFKALALG-ASGIFIGRPV 308 (366)
Q Consensus 279 vi~~GGI~~~~dv~kalalG-Ad~V~igr~~ 308 (366)
|.++.-+.+..|+.+++..| +|.|++--..
T Consensus 242 Ia~dE~~~~~~~~~~~i~~~a~d~v~~k~~~ 272 (379)
T 3r0u_A 242 VVADESVFDAKDAERVIDEQACNMINIKLAK 272 (379)
T ss_dssp EEESTTCSSHHHHHHHHHTTCCSEEEECHHH
T ss_pred EEeCCccCCHHHHHHHHHcCCCCEEEECccc
Confidence 99999999999999999988 7999986543
No 340
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=91.51 E-value=3.5 Score=38.29 Aligned_cols=100 Identities=19% Similarity=0.221 Sum_probs=68.9
Q ss_pred HHcCCcEEEEcC---CCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHhCcCEEEecHHHHHHhhh
Q 017781 239 VQAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVYSLAA 314 (366)
Q Consensus 239 ~~aGad~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~-~dv~kalalGAd~V~igr~~l~~l~~ 314 (366)
.+.|+|.+-++. ||-+. ....-.++.|.+|.+.+ ++|+..=||=..+ +++.||+.+|..-|-|++-+.++...
T Consensus 169 ~~TgvD~LAvaiGt~HG~Y~-~~p~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~ 245 (288)
T 3q94_A 169 EATGIDCLAPALGSVHGPYK-GEPNLGFAEMEQVRDFT--GVPLVLHGGTGIPTADIEKAISLGTSKINVNTENQIEFTK 245 (288)
T ss_dssp HHHCCSEEEECSSCBSSCCS-SSCCCCHHHHHHHHHHH--CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHH
T ss_pred HHHCCCEEEEEcCcccCCcC-CCCccCHHHHHHHHHhc--CCCEEEeCCCCCCHHHHHHHHHcCCeEEEEChHHHHHHHH
Confidence 578999999874 55331 11123678999999998 6999998875555 55889999999999999977554211
Q ss_pred -------c-----CH-HHHHHHHHHHHHHHHHHHHHcCCC
Q 017781 315 -------E-----GE-KGVRRVLEMLREEFELAMALSGCR 341 (366)
Q Consensus 315 -------~-----G~-~gv~~~~~~l~~el~~~m~~~G~~ 341 (366)
. .+ .-+....+.+++.++..|+.+|+.
T Consensus 246 ~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 285 (288)
T 3q94_A 246 AVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSN 285 (288)
T ss_dssp HHHHHHHHCSSCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 0 01 123333456777778888888864
No 341
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=91.33 E-value=0.38 Score=48.08 Aligned_cols=61 Identities=23% Similarity=0.332 Sum_probs=48.8
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.++|+|.|.++...|. ....++.+.++++.++ ++||++ |++.+.+++.++..+|||++.+|
T Consensus 246 ~~aGvd~v~i~~~~G~----~~~~~e~i~~i~~~~p-~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 246 VKAGVDVIVIDTAHGH----SRRVIETLEMIKADYP-DLPVVA-GNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp HHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TSCEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHhCCCEEEEEecCCc----hHHHHHHHHHHHHHCC-CceEEe-CCcCCHHHHHHHHHcCCCEEEEc
Confidence 8999999998653331 2346788888888874 588887 77899999999999999999984
No 342
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=91.15 E-value=9.5 Score=35.37 Aligned_cols=178 Identities=17% Similarity=0.248 Sum_probs=95.6
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHHH
Q 017781 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (366)
Q Consensus 73 Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~~ 138 (366)
|-++.|+.-.+-...++-..+++-.-+.|+...+ + +..+.+.+|-.+ . .+ .|.+...- ..+.+..
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 96 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHAS 96 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHH
Confidence 4445565322222223334666666778875543 3 334566665432 1 22 35666654 3456667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHH
Q 017781 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVK 218 (366)
Q Consensus 139 ~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 218 (366)
.++.+.|+++|++++.+. +|.. ++ | ...-..+..+
T Consensus 97 i~la~~A~~~Gadavlv~--~P~y-~~----------~--------------------------------s~~~l~~~f~ 131 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLV--APYY-NK----------P--------------------------------SQEGMYQHFK 131 (301)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-SC----------C--------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCCC-CC----------C--------------------------------CHHHHHHHHH
Confidence 788999999999998874 2321 00 0 0000123345
Q ss_pred HHHHhcCCCEEEEec-------cCHHH----HHc-CCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCC
Q 017781 219 WLQTITKLPILVKGV-------LTAED----VQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 286 (366)
Q Consensus 219 ~lr~~~~~pv~vK~v-------~~~~d----~~a-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~ 286 (366)
.+-+.+++||++=.+ ++++. .+. .+-+|.-+. ..+..+.++.+..++++.| .+|.
T Consensus 132 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v-~~G~-- 198 (301)
T 1xky_A 132 AIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIKDAG----------GDVLTMTEIIEKTADDFAV-YSGD-- 198 (301)
T ss_dssp HHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECS----------SCHHHHHHHHHHSCTTCEE-EESS--
T ss_pred HHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEcCC----------CCHHHHHHHHHhcCCCeEE-EECc--
Confidence 556667788887754 23343 111 122222211 1344555666666545555 4552
Q ss_pred CHHHHHHHHHhCcCEEEecHHHHH
Q 017781 287 RGTDVFKALALGASGIFIGRPVVY 310 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~igr~~l~ 310 (366)
..-++.++++||+++.-+..-++
T Consensus 199 -d~~~l~~l~~G~~G~is~~an~~ 221 (301)
T 1xky_A 199 -DGLTLPAMAVGAKGIVSVASHVI 221 (301)
T ss_dssp -GGGHHHHHHTTCCEEEESTHHHH
T ss_pred -HHHHHHHHHcCCCEEEcCHHHhC
Confidence 34478889999999988875443
No 343
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=91.14 E-value=1.5 Score=43.25 Aligned_cols=84 Identities=8% Similarity=-0.069 Sum_probs=63.5
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|- +. ..+..++.+.++++.+ .+||+
T Consensus 226 d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~--~iPIa 295 (440)
T 3t6c_A 226 IPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLE-------DP-VAPENTEWLKMLRQQS--STPIA 295 (440)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------CS-SCGGGGGGHHHHHHHC--CSCEE
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEE-------CC-CChhhHHHHHHHHhhc--CCCEE
Confidence 356688999987 578888854 45554 567777774 11 1223566778888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
++.-+.+..|+.+++..| +|.|++--
T Consensus 296 ~dE~~~~~~~~~~~i~~~a~d~v~~k~ 322 (440)
T 3t6c_A 296 MGELFVNVNEWKPLIDNKLIDYIRCHI 322 (440)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEECCCG
T ss_pred eCcccCCHHHHHHHHHcCCccceeech
Confidence 999999999999999987 79998864
No 344
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=91.12 E-value=3.3 Score=39.93 Aligned_cols=115 Identities=13% Similarity=0.027 Sum_probs=77.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+++.+.+.++++.+.|++++-+.+++. +..
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~~-------------------------------------------------~~~ 171 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGKN-------------------------------------------------LDA 171 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSC-------------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCCC-------------------------------------------------HHH
Confidence 4566677777777788999987765431 111
Q ss_pred CHHHHHHHHHhc--CCCEE-EEec--cCHHH--------HHcCC--cEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCc
Q 017781 213 SWKDVKWLQTIT--KLPIL-VKGV--LTAED--------VQAGA--AGIIVSNHGARQLDYVPATIMALEEVVKATQGRI 277 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~-vK~v--~~~~d--------~~aGa--d~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i 277 (366)
+.+.++.+|+.+ +.++. +..- .+.++ .+.|+ ++|- +. ..+..++.+.++++.+ .+
T Consensus 172 d~~~v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iE-------qP-~~~~d~~~~~~l~~~~--~i 241 (391)
T 3gd6_A 172 DEEFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIE-------SP-APRNDFDGLYQLRLKT--DY 241 (391)
T ss_dssp HHHHHHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEE-------CC-SCTTCHHHHHHHHHHC--SS
T ss_pred HHHHHHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHHHHHhcCCCcceec-------CC-CChhhHHHHHHHHHHc--CC
Confidence 345566677665 45666 6532 34443 45677 6664 11 1223578888888887 79
Q ss_pred eEEEecCCCCHHHHHHHHHhC-cCEEEecHHH
Q 017781 278 PVFLDGGVRRGTDVFKALALG-ASGIFIGRPV 308 (366)
Q Consensus 278 ~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~ 308 (366)
|| +..+.+..|+.+++..| +|.|++--..
T Consensus 242 PI--dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 271 (391)
T 3gd6_A 242 PI--SEHVWSFKQQQEMIKKDAIDIFNISPVF 271 (391)
T ss_dssp CE--EEECCCHHHHHHHHHHTCCSEEEECHHH
T ss_pred Cc--CCCCCCHHHHHHHHHcCCCCEEEECchh
Confidence 99 88999999999999987 7999998644
No 345
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=91.10 E-value=0.79 Score=43.88 Aligned_cols=61 Identities=21% Similarity=0.232 Sum_probs=46.0
Q ss_pred HHc--CCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 239 VQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ~~a--Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.+. |+|.|.++...| .....++.+.++++..+ ++||++ |++.+.+|+.++..+|||+|.++
T Consensus 127 ~~~~~g~~~i~i~~~~g----~~~~~~~~i~~lr~~~~-~~~vi~-g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 127 LEAIPQVKYICLDVANG----YSEHFVEFVKDVRKRFP-QHTIMA-GNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHCTTCCEEEEECSCT----TBHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HhccCCCCEEEEEecCC----CcHHHHHHHHHHHHhcC-CCeEEE-EeCCCHHHHHHHHHhCCCEEEEC
Confidence 444 999988764322 12335678888887763 588886 77899999999999999999775
No 346
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=91.08 E-value=4.3 Score=37.40 Aligned_cols=59 Identities=24% Similarity=0.355 Sum_probs=43.0
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEec--CCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG--GVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~G--GI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.++|||.|.+-+ +++.+.+.++.+.+ ++|+-+.. +..+ +.+.-++|.+.|..+...+.+
T Consensus 178 ~eAGAd~i~~e~---------~~~~~~~~~i~~~~--~~P~n~~~~~~~~~---~~eL~~lGv~~v~~~~~~~ra 238 (275)
T 2ze3_A 178 ADAGADGIFVPL---------ALQSQDIRALADAL--RVPLNVMAFPGSPV---PRALLDAGAARVSFGQSLMLA 238 (275)
T ss_dssp HHTTCSEEECTT---------CCCHHHHHHHHHHC--SSCEEEECCTTSCC---HHHHHHTTCSEEECTTHHHHH
T ss_pred HHCCCCEEEECC---------CCCHHHHHHHHHhc--CCCEEEecCCCCCC---HHHHHHcCCcEEEEChHHHHH
Confidence 899999998632 45678888898888 57875553 3334 344446899999999877665
No 347
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=90.99 E-value=2.9 Score=40.13 Aligned_cols=88 Identities=13% Similarity=0.071 Sum_probs=45.9
Q ss_pred ceeEcCcccCCceEecccccccccCChh---hHHHHHHHHHcCCceecCCCCCCCHHHHhccCCCceEEEeeecCCHHHH
Q 017781 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVV 138 (366)
Q Consensus 62 st~l~g~~l~~Pi~iApm~~~~l~~~~~---e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~~~~~~Qly~~~d~~~~ 138 (366)
..+|.+.++++-|++|||+-.. ..+++ +..+.--.+++..++++.+....+.+ ....+. -.-+|....-+-.
T Consensus 7 P~~ig~~~lkNRiv~aPm~~~~-a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~--g~~~~~--~~gi~~d~~i~~~ 81 (362)
T 4ab4_A 7 PIKLGDLQLPNRIIMAPLTRCR-ADEGRVPNALMAEYYVQRASAGLILSEATSVSPM--GVGYPD--TPGIWNDEQVRGW 81 (362)
T ss_dssp CEEETTEEESCSEEECCCCCCC-CBTTTBCCHHHHHHHHHTTTSSEEEEEEEESSGG--GCCSTT--CCBCSSHHHHHHH
T ss_pred CeeECCEEeeCccEECCccCCc-cCCCCCCCHHHHHHHHHHHhhCEEeeeeeEeccc--ccCCCC--CCCcCCHHHHHHH
Confidence 3578889999999999997532 22332 23222222333345566544333321 111221 1113322223446
Q ss_pred HHHHHHHHHcCCCEEE
Q 017781 139 AQLVRRAERAGFKAIA 154 (366)
Q Consensus 139 ~~~l~ra~~~G~~ai~ 154 (366)
+++.+.+.+.|++.++
T Consensus 82 k~l~~avH~~G~~i~~ 97 (362)
T 4ab4_A 82 NNVTKAVHAAGGRIFL 97 (362)
T ss_dssp HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhcCCEEEE
Confidence 6777888888988643
No 348
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.71 E-value=1.6 Score=37.91 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=30.0
Q ss_pred CHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEc
Q 017781 213 SWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVS 249 (366)
Q Consensus 213 ~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs 249 (366)
.++.++++++.. ++|+++-+..+.++ .++|+|++++.
T Consensus 146 ~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~Gad~vvvG 187 (211)
T 3f4w_A 146 PIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVG 187 (211)
T ss_dssp SHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTCCSEEEEC
T ss_pred CHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 577889999986 88998887656555 88999999884
No 349
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=90.68 E-value=0.59 Score=43.57 Aligned_cols=155 Identities=15% Similarity=0.138 Sum_probs=83.4
Q ss_pred CCceEecccccccccCChhhHHHHHHHHHcCCc-ee-cCCC--C-----C--CCHH---HH----hccCCCceEEEeeec
Q 017781 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTI-MT-LSSW--S-----T--SSVE---EV----ASTGPGIRFFQLYVY 132 (366)
Q Consensus 71 ~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~-~~-vs~~--~-----~--~~~e---~i----~~~~~~~~~~Qly~~ 132 (366)
..|+++.-++. .++.-...++.+.+.|.. ++ ++-. . . .+.+ ++ ++....|.++.+...
T Consensus 93 ~~p~~~~i~g~----~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 93 EGPIFFSIAGM----SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp SSCCEEEECCS----SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred CCCEEEEcCCC----CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 46776654421 123335777778888865 33 3210 0 0 1222 22 222235788888766
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCC
Q 017781 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (366)
.+.+...++++.++++|++++.++ +....+.. -|.... ..... ..... .+ ++.....+.
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~-~~~~~g~~-i~~~~~-----~~~~~---------~~~~~-gG----~sg~~~~~~ 227 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSV-NSIGNGLF-IDPEAE-----SVVIK---------PKDGF-GG----IGGAYIKPT 227 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEEC-CCEEEEEC-EETTTT-----EESCS---------GGGGE-EE----EESGGGHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEec-CCCCcCce-eccCCC-----Ccccc---------cCCCC-Cc----cccccccHH
Confidence 677777788899999999999875 22100000 000000 00000 00000 00 000001123
Q ss_pred CHHHHHHHHHhc--CCCEEEEe-ccCHHH----HHcCCcEEEEcC
Q 017781 213 SWKDVKWLQTIT--KLPILVKG-VLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~-v~~~~d----~~aGad~I~vs~ 250 (366)
.|+.++++++.+ ++||+.=| +.+.+| ..+|||+|.+..
T Consensus 228 ~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~ 272 (311)
T 1jub_A 228 ALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGT 272 (311)
T ss_dssp HHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEch
Confidence 578899999998 89988775 468887 778999998743
No 350
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=90.67 E-value=4.1 Score=37.77 Aligned_cols=100 Identities=17% Similarity=0.284 Sum_probs=69.1
Q ss_pred HHcCCcEEEEcC---CCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHhCcCEEEecHHHHHHhhh
Q 017781 239 VQAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVYSLAA 314 (366)
Q Consensus 239 ~~aGad~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~-~dv~kalalGAd~V~igr~~l~~l~~ 314 (366)
.+.|+|.+-++. ||-+. ....-.++.|.+|.+.+ ++|+..=||=..+ +++.|++.+|..-|-|++-+.++...
T Consensus 165 ~~TgvD~LAvaiGt~HG~Y~-~~p~Ld~~~L~~I~~~~--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~ 241 (286)
T 1gvf_A 165 ELTGVDSLAVAIGTAHGLYS-KTPKIDFQRLAEIREVV--DVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAG 241 (286)
T ss_dssp HHHCCSEEEECSSCCSSCCS-SCCCCCHHHHHHHHHHC--CSCEEECCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHH
T ss_pred HHHCCCEEEeecCccccCcC-CCCccCHHHHHHHHHhc--CCCEEEECCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHH
Confidence 578999999874 44322 11123678999999998 7999998865544 55888999999999999977554211
Q ss_pred -------cC-----HH-HHHHHHHHHHHHHHHHHHHcCCC
Q 017781 315 -------EG-----EK-GVRRVLEMLREEFELAMALSGCR 341 (366)
Q Consensus 315 -------~G-----~~-gv~~~~~~l~~el~~~m~~~G~~ 341 (366)
.. +. -+....+.+++.++..|..+|+.
T Consensus 242 ~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 281 (286)
T 1gvf_A 242 AVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSA 281 (286)
T ss_dssp HHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHhCcccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 11 11 13334466778888888888864
No 351
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=90.66 E-value=0.47 Score=43.41 Aligned_cols=37 Identities=32% Similarity=0.478 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCCEEEEe-ccCHHH---HHcCCcEEEEcC
Q 017781 214 WKDVKWLQTITKLPILVKG-VLTAED---VQAGAAGIIVSN 250 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~vK~-v~~~~d---~~aGad~I~vs~ 250 (366)
.+.++++|+.+++|+++.. +.++++ ...+||+++|..
T Consensus 188 ~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~~ADGVIVGS 228 (252)
T 3tha_A 188 QDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKVADGVIVGT 228 (252)
T ss_dssp HHHHHHHHTTCCSCEEEESSCCSHHHHHHHTTTSSEEEECH
T ss_pred HHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHhcCCEEEECH
Confidence 3568999999999999995 468877 555799999854
No 352
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=90.59 E-value=0.15 Score=45.52 Aligned_cols=44 Identities=18% Similarity=0.118 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCCCceEEEecCCCCHH---H------HHHHHHhCcCEEEecHHHHHH
Q 017781 264 MALEEVVKATQGRIPVFLDGGVRRGT---D------VFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 264 ~~l~~i~~~~~~~i~vi~~GGI~~~~---d------v~kalalGAd~V~igr~~l~~ 311 (366)
+.+.++++.++ .+ ++++||+-.. | ..+ +..|||.+.+||+++.+
T Consensus 146 ~~~~~ir~~~~--~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVvGR~I~~a 198 (213)
T 1vqt_A 146 PWAKALREKIK--GK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVLGREIYLS 198 (213)
T ss_dssp HHHHHHTTTCC--SC-EEECCBC---------CCBCHHH-HTTTCSEEEESHHHHTS
T ss_pred HHHHHHHHHCC--CC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEEChhhcCC
Confidence 34555655553 35 8889997543 2 677 88999999999998753
No 353
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=90.57 E-value=2.6 Score=40.29 Aligned_cols=43 Identities=33% Similarity=0.458 Sum_probs=37.2
Q ss_pred chHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 261 ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 261 ~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
..++.+.++++.+ .+||+++.-+.+..|+.+.+..| +|.|++-
T Consensus 226 ~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (375)
T 1r0m_A 226 DDLVDHAELARRI--RTPLCLDESVASASDARKALALGAGGVINLK 269 (375)
T ss_dssp TCSHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHHTSCSEEEEC
T ss_pred ccHHHHHHHHHhC--CCCEEecCccCCHHHHHHHHHhCCCCEEEEC
Confidence 3566778888777 79999999999999999999988 8999984
No 354
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=90.50 E-value=11 Score=34.85 Aligned_cols=174 Identities=17% Similarity=0.184 Sum_probs=95.0
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCceec--CC---CCCCCHHHHhc-------c-CC-CceEEEeeecCCHHHH
Q 017781 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (366)
Q Consensus 73 Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s~---~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~~ 138 (366)
|.++.|+. .+-...++-..+++-.-+.|+...+ +| ..+.+.+|-.+ . .. .|.+...- ..+.+..
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEA 84 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 44556665 4433334445677777778875543 33 34566665432 1 22 35555554 3456667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHH
Q 017781 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVK 218 (366)
Q Consensus 139 ~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 218 (366)
.++.++++++|++++.+. +|.. ++ | ...-..+..+
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y-~~----------~--------------------------------s~~~l~~~f~ 119 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVV--VPYY-NK----------P--------------------------------TQRGLYEHFK 119 (294)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-SC----------C--------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-CC----------C--------------------------------CHHHHHHHHH
Confidence 788899999999998874 2321 00 0 0000123345
Q ss_pred HHHHhcCCCEEEEec-------cCHHH----H-HcC-CcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCC
Q 017781 219 WLQTITKLPILVKGV-------LTAED----V-QAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 285 (366)
Q Consensus 219 ~lr~~~~~pv~vK~v-------~~~~d----~-~aG-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI 285 (366)
.+-+.+++||++=.+ ++++. . +.. +-+|.-+. ..+..+.++.+..++++.| .+|.
T Consensus 120 ~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKds~----------gd~~~~~~~~~~~~~~f~v-~~G~- 187 (294)
T 2ehh_A 120 TVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVASKEST----------PNMDRISEIVKRLGESFSV-LSGD- 187 (294)
T ss_dssp HHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECC----------SCHHHHHHHHHHHCTTSEE-EESS-
T ss_pred HHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHhcCCCeEE-EECc-
Confidence 555666788887654 24443 2 221 22222211 1344455555555555655 4452
Q ss_pred CCHHHHHHHHHhCcCEEEecHH
Q 017781 286 RRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 286 ~~~~dv~kalalGAd~V~igr~ 307 (366)
-.-++.++++||+++.-+..
T Consensus 188 --d~~~~~~l~~G~~G~is~~a 207 (294)
T 2ehh_A 188 --DSLTLPMMALGAKGVISVAN 207 (294)
T ss_dssp --GGGHHHHHHTTCCEEEESGG
T ss_pred --HHHHHHHHHCCCCEEEeCHH
Confidence 33477899999999998874
No 355
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.50 E-value=11 Score=34.81 Aligned_cols=175 Identities=18% Similarity=0.217 Sum_probs=95.1
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHHH
Q 017781 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (366)
Q Consensus 73 Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~~ 138 (366)
|-++.|+.-.+-...++-..+++-.-+.|+...+ + +..+.+.+|-.+ . .+ .+.+...- ..+.+..
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREA 85 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHH
Confidence 4455666422222233334666666778876443 3 334556665432 1 22 35666654 3466667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHH
Q 017781 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVK 218 (366)
Q Consensus 139 ~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 218 (366)
.++.++++++|++++.+. +|... + | ..+-..+..+
T Consensus 86 i~la~~a~~~Gadavlv~--~P~y~-~----------~--------------------------------~~~~l~~~f~ 120 (291)
T 3tak_A 86 IELTKAAKDLGADAALLV--TPYYN-K----------P--------------------------------TQEGLYQHYK 120 (291)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCSS-C----------C--------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCCCC-C----------C--------------------------------CHHHHHHHHH
Confidence 788899999999998873 23210 0 0 0000123455
Q ss_pred HHHHhcCCCEEEEec-------cCHHH-HHc-C---CcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCC
Q 017781 219 WLQTITKLPILVKGV-------LTAED-VQA-G---AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 286 (366)
Q Consensus 219 ~lr~~~~~pv~vK~v-------~~~~d-~~a-G---ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~ 286 (366)
.+-+.+++||++=.+ .+++. .+. - +-+|.-+. ..+..+.++.+..++++.|+ +|.
T Consensus 121 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~ss----------gd~~~~~~~~~~~~~~f~v~-~G~-- 187 (291)
T 3tak_A 121 AIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIKDAT----------GDVPRGKALIDALNGKMAVY-SGD-- 187 (291)
T ss_dssp HHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECS----------CCHHHHHHHHHHHTTSSEEE-ECC--
T ss_pred HHHHhcCCCEEEEecccccCCCCCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHHcCCCeEEE-ECc--
Confidence 666667888887754 23333 111 1 11222111 23444555655555566654 453
Q ss_pred CHHHHHHHHHhCcCEEEecHH
Q 017781 287 RGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~igr~ 307 (366)
..-++.++++||+++.-+..
T Consensus 188 -d~~~~~~l~~G~~G~is~~~ 207 (291)
T 3tak_A 188 -DETAWELMLLGADGNISVTA 207 (291)
T ss_dssp -HHHHHHHHHTTCCEEEESGG
T ss_pred -HHHHHHHHHCCCCEEEechh
Confidence 45577889999999987764
No 356
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=90.44 E-value=0.47 Score=46.18 Aligned_cols=61 Identities=11% Similarity=0.262 Sum_probs=46.1
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.++|+|+|.+....|. ....++.+.++++.++ ++||++ |++.+.+++.++..+|||++.+|
T Consensus 162 ~~~G~d~i~i~~~~g~----~~~~~e~i~~ir~~~~-~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 162 VKAHVDILVIDSAHGH----STRIIELIKKIKTKYP-NLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHCCCCEEEEeCCCCC----hHHHHHHHHHHHHHCC-CCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 7799999988321121 1235677788887764 689887 77889999999999999999993
No 357
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=90.33 E-value=1.6 Score=42.19 Aligned_cols=84 Identities=17% Similarity=0.140 Sum_probs=56.3
Q ss_pred HHHHHHHHHhc-CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe
Q 017781 214 WKDVKWLQTIT-KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 282 (366)
Q Consensus 214 ~~~i~~lr~~~-~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~ 282 (366)
.+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- + ...+..++.+.++++.. .+||.++
T Consensus 180 ~~~v~avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~d 249 (385)
T 3i6e_A 180 IMRLELIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFIE-------Q-PVRAHHFELMARLRGLT--DVPLLAD 249 (385)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCEE-------C-CSCTTCHHHHHHHHTTC--SSCEEES
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCCcccHHHHHHHHHhC--CCCEEEe
Confidence 34566666665 455666532 22222 445666663 1 11223567788887766 7999999
Q ss_pred cCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 283 GGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 283 GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
.-+.+..|+.+++..| +|.|++--.
T Consensus 250 E~~~~~~~~~~~~~~~~~d~v~~k~~ 275 (385)
T 3i6e_A 250 ESVYGPEDMVRAAHEGICDGVSIKIM 275 (385)
T ss_dssp TTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 9999999999999987 799988643
No 358
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=90.31 E-value=1.9 Score=38.06 Aligned_cols=84 Identities=14% Similarity=0.223 Sum_probs=53.2
Q ss_pred CHHHHHHHHHhcCCCEEEEec--cCHHH----HHcCCcEEEEcCC----Ccc--CCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTITKLPILVKGV--LTAED----VQAGAAGIIVSNH----GAR--QLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v--~~~~d----~~aGad~I~vs~~----gg~--~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+ ++|++ |-+ .+.++ .+..+|++.++.. ||+ ..||. .+.++. ....|++
T Consensus 87 ~~~~~~~l~~--~~~vi-ka~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~~fdw~-----~l~~~~---~~~~p~~ 155 (205)
T 1nsj_A 87 PIELCRKIAE--RILVI-KAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTFDWS-----LILPYR---DRFRYLV 155 (205)
T ss_dssp CHHHHHHHHT--TSEEE-EEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCSCCCGG-----GTGGGG---GGSSCEE
T ss_pred CHHHHHHHhc--CCCEE-EEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCCccCHH-----HHHhhh---cCCCcEE
Confidence 4456666654 35654 533 33333 2334899998764 442 34443 333321 1257999
Q ss_pred EecCCCCHHHHHHHHH-hCcCEEEecHHH
Q 017781 281 LDGGVRRGTDVFKALA-LGASGIFIGRPV 308 (366)
Q Consensus 281 ~~GGI~~~~dv~kala-lGAd~V~igr~~ 308 (366)
..||+ +++.+.+|+. +++.+|=+.+-+
T Consensus 156 LAGGL-~peNV~~ai~~~~p~gVDvsSGv 183 (205)
T 1nsj_A 156 LSGGL-NPENVRSAIDVVRPFAVDVSSGV 183 (205)
T ss_dssp EESSC-CTTTHHHHHHHHCCSEEEESGGG
T ss_pred EECCC-CHHHHHHHHHhcCCCEEEECCce
Confidence 99999 7889999987 699999998654
No 359
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=90.25 E-value=6.2 Score=36.80 Aligned_cols=62 Identities=15% Similarity=0.077 Sum_probs=43.7
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe---cCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~---GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.++|||.|.+-+ +.+.+.+.++.+.+ ++||+++ +|-.-.-.+.+.-++|.+.|.+|...+.+
T Consensus 181 ~~AGAD~if~~~---------~~~~ee~~~~~~~~--~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ra 245 (298)
T 3eoo_A 181 VEAGADMIFPEA---------MKTLDDYRRFKEAV--KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYRA 245 (298)
T ss_dssp HHTTCSEEEECC---------CCSHHHHHHHHHHH--CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHHH
T ss_pred HhcCCCEEEeCC---------CCCHHHHHHHHHHc--CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHH
Confidence 999999998733 34677888888888 5887664 43221123444556899999999877665
No 360
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=90.20 E-value=7.1 Score=36.22 Aligned_cols=65 Identities=20% Similarity=0.231 Sum_probs=44.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~~l~~ 311 (366)
.++|||.|.+-+ ++++.+.+.++.+.++..+|+++.-.-...-++.+.-++| .+.|.+|...+.+
T Consensus 176 ~eAGAd~i~~e~--------~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~ra 241 (290)
T 2hjp_A 176 EEAGADAILIHS--------RQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRA 241 (290)
T ss_dssp HHTTCSEEEECC--------CCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHH
T ss_pred HHcCCcEEEeCC--------CCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHH
Confidence 899999998733 2455677788888885459999752100112344444589 9999999877665
No 361
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=90.03 E-value=0.89 Score=43.82 Aligned_cols=101 Identities=21% Similarity=0.289 Sum_probs=63.9
Q ss_pred CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHH
Q 017781 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAA 202 (366)
Q Consensus 123 ~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (366)
.|.++.+-+..+.+.+.++++.++++|+++|.++--+.. |.. ...|. ..+ ... +
T Consensus 221 ~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~---r~~-----~~~~~---~~~----------~~g--G--- 274 (367)
T 3zwt_A 221 PAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVS---RPA-----GLQGA---LRS----------ETG--G--- 274 (367)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSC---CCT-----TCCCT---TTT----------SSS--E---
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcc---ccc-----ccccc---ccc----------ccC--C---
Confidence 578888877777778888999999999999987622110 100 00000 000 000 0
Q ss_pred HhhhccCCCCCHHHHHHHHHhc--CCCEEEEe-ccCHHH----HHcCCcEEEEcC
Q 017781 203 YVAGQIDRSLSWKDVKWLQTIT--KLPILVKG-VLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 203 ~~~~~~d~~~~~~~i~~lr~~~--~~pv~vK~-v~~~~d----~~aGad~I~vs~ 250 (366)
++.....+.+|+.|+++++.+ ++||+.=| +.+.+| .++|||+|.+..
T Consensus 275 -lSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~vgr 328 (367)
T 3zwt_A 275 -LSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYT 328 (367)
T ss_dssp -EEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred -cCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 000011234678899999999 79988764 578888 779999998743
No 362
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=89.95 E-value=3.2 Score=39.53 Aligned_cols=42 Identities=17% Similarity=0.303 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 262 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
.++.+.++++.+ .+||+++.-+.+..|+.+++..| +|.|++-
T Consensus 220 d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 262 (369)
T 2zc8_A 220 DLLDHAKLQREL--STPICLDESLTGAEKARKAIELGAGRVFNVK 262 (369)
T ss_dssp CSHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred cHHHHHHHHhhC--CCCEEEcCccCCHHHHHHHHHhCCCCEEEEc
Confidence 566777888777 79999999999999999999988 8999985
No 363
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=89.94 E-value=1.2 Score=39.96 Aligned_cols=90 Identities=17% Similarity=0.267 Sum_probs=60.5
Q ss_pred cCCCCCHHHHHHHHHhcCCCEEEEec--c----CHH-H--------HHcCCcEEEEcCCCcc--CCCCCcchHHHHHHHH
Q 017781 208 IDRSLSWKDVKWLQTITKLPILVKGV--L----TAE-D--------VQAGAAGIIVSNHGAR--QLDYVPATIMALEEVV 270 (366)
Q Consensus 208 ~d~~~~~~~i~~lr~~~~~pv~vK~v--~----~~~-d--------~~aGad~I~vs~~gg~--~~~~~~~~~~~l~~i~ 270 (366)
.+.+.+.+.++.+++.+++|++ |-+ . ..+ + ....+|++.+...||+ ..| |+.+..+.
T Consensus 98 LHG~E~~~~~~~l~~~~~~~vi-Ka~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~GGtG~~fD-----W~~~~~~~ 171 (228)
T 4aaj_A 98 VHSNALPQTIDTLKKEFGVFVM-KAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTGAGSGKLHD-----LRVSSLVA 171 (228)
T ss_dssp ECSCCCHHHHHHHHHHHCCEEE-EEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC-------CC-----CHHHHHHH
T ss_pred cccccCHHHHHHHhhccCceEE-EEEEecccccchhhhHHHHHHHHhccCCCEEccCCCCCCcCcCC-----hHHHHHhh
Confidence 3456677889999998888754 532 1 111 1 4457999999877664 234 44555544
Q ss_pred HHcCCCceEEEecCCCCHHHHHHHHH-hCcCEEEecHHH
Q 017781 271 KATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGRPV 308 (366)
Q Consensus 271 ~~~~~~i~vi~~GGI~~~~dv~kala-lGAd~V~igr~~ 308 (366)
. +.|+|..||+ +++.|.+|+. .+..+|=+.+-+
T Consensus 172 ~----~~p~iLAGGL-~peNV~~Ai~~~~P~gVDVsSGV 205 (228)
T 4aaj_A 172 R----KIPVIVAGGL-NAENVEEVIKVVKPYGVDVSSGV 205 (228)
T ss_dssp H----HSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGG
T ss_pred h----cCCeEEECCC-CHHHHHHHHHHhCCCEEEeCCCC
Confidence 3 4699999999 6899999998 799888887643
No 364
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=89.91 E-value=0.98 Score=41.83 Aligned_cols=85 Identities=12% Similarity=0.151 Sum_probs=50.6
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCHHHHHH----HHHhCcCEEEecHHHHHH-h
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVYS-L 312 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~k----alalGAd~V~igr~~l~~-l 312 (366)
.+.|+|+|++.++.|....-... ..+++..+++.+.+ -|...|+. +-.++++ |-.+|||++++-.|+++. .
T Consensus 29 i~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~~ 105 (286)
T 2r91_A 29 TSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQVASL-NADEAIALAKYAESRGAEAVASLPPYYFPRL 105 (286)
T ss_dssp HHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEECCCS-SHHHHHHHHHHHHHTTCSEEEECCSCSSTTC
T ss_pred HHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEeeCCC-CHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC
Confidence 56799999998876643211211 23455556666654 33444444 4444432 334799999999998764 2
Q ss_pred hhcCHHHHHHHHHHHHH
Q 017781 313 AAEGEKGVRRVLEMLRE 329 (366)
Q Consensus 313 ~~~G~~gv~~~~~~l~~ 329 (366)
.++++.++++.+.+
T Consensus 106 ---s~~~l~~~f~~va~ 119 (286)
T 2r91_A 106 ---SERQIAKYFRDLCS 119 (286)
T ss_dssp ---CHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHH
Confidence 45666555555443
No 365
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=89.71 E-value=3.2 Score=36.77 Aligned_cols=122 Identities=13% Similarity=0.076 Sum_probs=76.9
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEec-CCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR 210 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtv-d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 210 (366)
..|.....+.++++.+.|++.+-+.+ |.+ | +| .-
T Consensus 15 a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~------------f-v~--------------------------------~~ 49 (228)
T 1h1y_A 15 SSDFANLAAEADRMVRLGADWLHMDIMDGH------------F-VP--------------------------------NL 49 (228)
T ss_dssp GSCGGGHHHHHHHHHHTTCSEEEEEEEBSS------------S-SS--------------------------------CB
T ss_pred eCCHHHHHHHHHHHHHcCCCEEEEEEecCC------------c-Cc--------------------------------ch
Confidence 45677778888999999999875532 111 0 01 01
Q ss_pred CCCHHHHHHHHHhcCCCEEEEec-cCHH----H-HHcCCcEEEEcCCCccCCCCCcch-HHHHHHHHHHcCCCceEEEec
Q 017781 211 SLSWKDVKWLQTITKLPILVKGV-LTAE----D-VQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGRIPVFLDG 283 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~~pv~vK~v-~~~~----d-~~aGad~I~vs~~gg~~~~~~~~~-~~~l~~i~~~~~~~i~vi~~G 283 (366)
.+..+.++.+|+.++.|+.+-.. .+++ . .++|+|+|+++..- .... ...+..+++. .+.++.+=
T Consensus 50 ~~~~~~~~~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~vH~~~------~~~~~~~~~~~i~~~---g~~igv~~ 120 (228)
T 1h1y_A 50 TIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEV------SRDNWQELIQSIKAK---GMRPGVSL 120 (228)
T ss_dssp CBCHHHHHHHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEEEGGG------CTTTHHHHHHHHHHT---TCEEEEEE
T ss_pred hhCHHHHHHHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEECCCC------cccHHHHHHHHHHHc---CCCEEEEE
Confidence 23457889999988767775543 3432 2 88999999985421 1123 3445444432 45566555
Q ss_pred CCCCHHHHHHHHHh---CcCEEEecHH
Q 017781 284 GVRRGTDVFKALAL---GASGIFIGRP 307 (366)
Q Consensus 284 GI~~~~dv~kalal---GAd~V~igr~ 307 (366)
.-.+..+.++.+.. ++|.|.+++-
T Consensus 121 ~p~t~~e~~~~~~~~~~~~d~vl~~sv 147 (228)
T 1h1y_A 121 RPGTPVEEVFPLVEAENPVELVLVMTV 147 (228)
T ss_dssp CTTSCGGGGHHHHHSSSCCSEEEEESS
T ss_pred eCCCCHHHHHHHHhcCCCCCEEEEEee
Confidence 56677777777776 9999999753
No 366
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=89.68 E-value=4.9 Score=37.60 Aligned_cols=105 Identities=16% Similarity=0.122 Sum_probs=71.6
Q ss_pred HHcCCcEEEEcC---CCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHhCcCEEEecHHHHHHhhh
Q 017781 239 VQAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVYSLAA 314 (366)
Q Consensus 239 ~~aGad~I~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~-~dv~kalalGAd~V~igr~~l~~l~~ 314 (366)
.+.|+|.+-++. ||-+......-.++.|.+|.+.++.++|+..=||=..+ +++.+++.+|..-|-|++-+..+...
T Consensus 181 v~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~ 260 (306)
T 3pm6_A 181 VATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVNRAVNNEYVK 260 (306)
T ss_dssp HTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEESHHHHHHHHH
T ss_pred HHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeChHHHHHHHH
Confidence 667999888763 44332112233678999999988557999999876555 45789999999999999976543210
Q ss_pred --------cCH-HHHHHHHHHHHHHHHHHHHHcCCCCh
Q 017781 315 --------EGE-KGVRRVLEMLREEFELAMALSGCRSL 343 (366)
Q Consensus 315 --------~G~-~gv~~~~~~l~~el~~~m~~~G~~~l 343 (366)
..+ .-+....+.+++.++..|..+|+..-
T Consensus 261 ~~r~~~~~~~~~~~~~~~~~a~~~~v~~~i~~fgs~gk 298 (306)
T 3pm6_A 261 VMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGK 298 (306)
T ss_dssp HHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTTCTTG
T ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 011 11233446677888889999997643
No 367
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=89.55 E-value=0.52 Score=43.49 Aligned_cols=37 Identities=24% Similarity=0.215 Sum_probs=30.9
Q ss_pred CHHHHHHHHHhcCCCEEEEec-cCHHH---HHcCCcEEEEcC
Q 017781 213 SWKDVKWLQTITKLPILVKGV-LTAED---VQAGAAGIIVSN 250 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v-~~~~d---~~aGad~I~vs~ 250 (366)
..+.++++|+.+++||++-+. .++++ . .|||+++|..
T Consensus 190 ~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~-~~ADgVIVGS 230 (271)
T 1ujp_A 190 VKDLVRRIKARTALPVAVGFGVSGKATAAQA-AVADGVVVGS 230 (271)
T ss_dssp CHHHHHHHHTTCCSCEEEESCCCSHHHHHHH-TTSSEEEECH
T ss_pred HHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh-cCCCEEEECh
Confidence 457799999999999999965 45887 7 9999999854
No 368
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=89.54 E-value=3.3 Score=38.24 Aligned_cols=93 Identities=16% Similarity=0.113 Sum_probs=59.8
Q ss_pred CCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCcc----CCCCCcchHH-HHH---HHHHHcCCCce
Q 017781 211 SLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGAR----QLDYVPATIM-ALE---EVVKATQGRIP 278 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~----~~~~~~~~~~-~l~---~i~~~~~~~i~ 278 (366)
..+...++.+++. +.|+++=++-+... .++|+|.|.+....+. ..|..+-+++ .+. .+++.. .+.|
T Consensus 15 ~~t~~~lr~~~~~-g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~-~~~~ 92 (275)
T 3vav_A 15 AVTVPKLQAMREA-GEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQ-PRAL 92 (275)
T ss_dssp CCCHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTC-CSSE
T ss_pred CcCHHHHHHHHHC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcC-CCCC
Confidence 4577777777765 56888777766554 8999999955433221 1244444553 333 333333 2589
Q ss_pred EEEec---CCCCHHHHH----HHHHhCcCEEEec
Q 017781 279 VFLDG---GVRRGTDVF----KALALGASGIFIG 305 (366)
Q Consensus 279 vi~~G---GI~~~~dv~----kalalGAd~V~ig 305 (366)
|++|- |..++++++ +.+..||++|-|-
T Consensus 93 vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklE 126 (275)
T 3vav_A 93 IVADLPFGTYGTPADAFASAVKLMRAGAQMVKFE 126 (275)
T ss_dssp EEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 99995 456888875 5566899999885
No 369
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=89.54 E-value=2.3 Score=40.53 Aligned_cols=38 Identities=18% Similarity=0.290 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHhc-CCCEEEEec-cCHHH----HHcCCcEEEEc
Q 017781 211 SLSWKDVKWLQTIT-KLPILVKGV-LTAED----VQAGAAGIIVS 249 (366)
Q Consensus 211 ~~~~~~i~~lr~~~-~~pv~vK~v-~~~~d----~~aGad~I~vs 249 (366)
...|+.++++++.+ ++||+.=|. .+.++ .+ |||+|.+.
T Consensus 182 ~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~iG 225 (350)
T 3b0p_A 182 PLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVMLG 225 (350)
T ss_dssp CCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEEC
T ss_pred cccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEEC
Confidence 45799999999998 899998764 68887 55 99999874
No 370
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=89.44 E-value=0.49 Score=43.31 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=30.4
Q ss_pred HHHHHHHHHhcCCCEEEEec-cCHHH---HHcCCcEEEEcC
Q 017781 214 WKDVKWLQTITKLPILVKGV-LTAED---VQAGAAGIIVSN 250 (366)
Q Consensus 214 ~~~i~~lr~~~~~pv~vK~v-~~~~d---~~aGad~I~vs~ 250 (366)
.+.++++|+.+++||.+-+. .++++ ..+|||+++|..
T Consensus 195 ~~~v~~vr~~~~~pv~vG~GI~t~e~~~~~~~gADgvIVGS 235 (262)
T 2ekc_A 195 KKKVEEYRELCDKPVVVGFGVSKKEHAREIGSFADGVVVGS 235 (262)
T ss_dssp HHHHHHHHHHCCSCEEEESSCCSHHHHHHHHTTSSEEEECH
T ss_pred HHHHHHHHhhcCCCEEEeCCCCCHHHHHHHHcCCCEEEECH
Confidence 46789999999999999855 45877 788999999854
No 371
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=89.43 E-value=1.5 Score=40.22 Aligned_cols=104 Identities=21% Similarity=0.300 Sum_probs=75.2
Q ss_pred CceEEEeeec-------CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccc
Q 017781 123 GIRFFQLYVY-------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEA 195 (366)
Q Consensus 123 ~~~~~Qly~~-------~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (366)
+..|++|++- .|...+.+..+++.+.|++.+.++.|.|..++|..++...+-+|.+-
T Consensus 102 ~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~---------------- 165 (265)
T 1wv2_A 102 GHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAG---------------- 165 (265)
T ss_dssp SCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSS----------------
T ss_pred CCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCc----------------
Confidence 4569998875 67777777777777789999988889998888887765333222100
Q ss_pred cchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEE-eccCHHH----HHcCCcEEEEcC
Q 017781 196 NDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVK-GVLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 196 ~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK-~v~~~~d----~~aGad~I~vs~ 250 (366)
.+.. +.+-.+++.|+.+++..++|||+. ++.+++| .+.|+|+|.|..
T Consensus 166 -------pIGs-G~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 166 -------LIGS-GLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp -------STTC-CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEESH
T ss_pred -------cCCC-CCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 0000 112236889999999889999999 5678888 999999998854
No 372
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=89.40 E-value=1.6 Score=39.84 Aligned_cols=38 Identities=29% Similarity=0.308 Sum_probs=31.5
Q ss_pred CHHHHHHHHHhcCCCEEEEecc-CHHH----HHcCCcEEEEcC
Q 017781 213 SWKDVKWLQTITKLPILVKGVL-TAED----VQAGAAGIIVSN 250 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~-~~~d----~~aGad~I~vs~ 250 (366)
..+.++++|+..++||.+-+.. ++++ ..+|||+++|..
T Consensus 193 ~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 193 LHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp CHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 4678999999889999998665 4776 679999999854
No 373
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=89.37 E-value=14 Score=34.51 Aligned_cols=176 Identities=14% Similarity=0.121 Sum_probs=96.4
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
.|.++.|+.-.+-...++-..+++-.-+.|+...+ + +..+.+.+|..+ . .+ .|.+...- ..+.+.
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 45556676432223333345677777778886543 2 344566665432 1 22 45666654 345666
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHH
Q 017781 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDV 217 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 217 (366)
..++.+.++++|++++.+. +|..- + | ..+-..+..
T Consensus 108 ai~la~~A~~~Gadavlv~--~P~y~-~----------~--------------------------------s~~~l~~~f 142 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVL--PISYW-K----------L--------------------------------NEAEVFQHY 142 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCSS-C----------C--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCC-C----------C--------------------------------CHHHHHHHH
Confidence 7788899999999998873 23210 0 0 000012334
Q ss_pred HHHHHhcCCCEEEEec-------cCHHH-HHc-----CCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecC
Q 017781 218 KWLQTITKLPILVKGV-------LTAED-VQA-----GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 284 (366)
Q Consensus 218 ~~lr~~~~~pv~vK~v-------~~~~d-~~a-----Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GG 284 (366)
+.+-+.+++||++=.+ ++++. .+. .+-+|.-+. ..+..+.++.+..++++.|+. |.
T Consensus 143 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v~~-G~ 211 (315)
T 3na8_A 143 RAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVKEST----------GDIQRMHKLRLLGEGRVPFYN-GC 211 (315)
T ss_dssp HHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEEEECS----------SCHHHHHHHHHHTTTCSCEEE-CC
T ss_pred HHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEEECCC----------CCHHHHHHHHHHcCCCEEEEe-Cc
Confidence 5555566777777654 23333 111 122222211 134455566666665666664 43
Q ss_pred CCCHHHHHHHHHhCcCEEEecHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~ 307 (366)
..-++.++++||+++.-+..
T Consensus 212 ---D~~~l~~l~~G~~G~is~~a 231 (315)
T 3na8_A 212 ---NPLALEAFVAGAKGWCSAAP 231 (315)
T ss_dssp ---GGGHHHHHHHTCSEEEESGG
T ss_pred ---hHHHHHHHHCCCCEEEechh
Confidence 33467889999999988864
No 374
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=89.23 E-value=1.2 Score=43.03 Aligned_cols=81 Identities=5% Similarity=-0.031 Sum_probs=58.4
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHH-----cCC
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA-----TQG 275 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~-----~~~ 275 (366)
..+.++.+|+.+ +.+|.+-.- .+.++ .+.|+++|- +. .. ..++.+.++++. .
T Consensus 187 ~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE-------~P-~~-~d~~~~~~l~~~l~~~g~-- 255 (392)
T 3p3b_A 187 DIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLAALSDVNLYWLE-------EA-FH-EDEALYEDLKEWLGQRGQ-- 255 (392)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHTTTSCEEEEE-------CS-SS-CCHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEe-------cC-Cc-ccHHHHHHHHHhhccCCC--
Confidence 456788888876 477777632 35554 455666553 11 11 356778888877 5
Q ss_pred CceEEEecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 276 RIPVFLDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 276 ~i~vi~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
++||++++ +.+..++.+++..| +|.|++-
T Consensus 256 ~iPIa~dE-~~~~~~~~~~i~~~~~d~v~ik 285 (392)
T 3p3b_A 256 NVLIADGE-GLASPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp CCEEEECC-SSCCTTHHHHHHTTSCCEECCB
T ss_pred CccEEecC-CCCHHHHHHHHHcCCCCEEEeC
Confidence 79999999 99999999999998 7999884
No 375
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=89.19 E-value=0.87 Score=42.59 Aligned_cols=91 Identities=23% Similarity=0.268 Sum_probs=56.4
Q ss_pred CHHHHHHHHHhcCCCEEEEecc--CHHH--------HHcCCcEEEEcCCCccCCCCC--cchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTITKLPILVKGVL--TAED--------VQAGAAGIIVSNHGARQLDYV--PATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~--~~~d--------~~aGad~I~vs~~gg~~~~~~--~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++++- .+++||++|..+ +++| .+.|.+-|++--.|- ..... ...+..++.+++ . .+||+
T Consensus 144 n~~LLr~va-~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~-~y~~~~~~vdl~~i~~lk~-~--~~PV~ 218 (298)
T 3fs2_A 144 QTDLLIAAA-RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGV-SFGYNTLVSDMRALPIMAG-L--GAPVI 218 (298)
T ss_dssp CHHHHHHHH-HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCE-ECSSSCEECCTTHHHHHHT-T--TSCEE
T ss_pred CHHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCC-CCCCCCCccCHHHHHHHHH-c--CCcEE
Confidence 445566665 468999999764 6655 667877676643332 11111 124566777666 5 79999
Q ss_pred Ee---------------cCCCCHH--HHHHHHHhCcCEEEecHHH
Q 017781 281 LD---------------GGVRRGT--DVFKALALGASGIFIGRPV 308 (366)
Q Consensus 281 ~~---------------GGI~~~~--dv~kalalGAd~V~igr~~ 308 (366)
+| ||.|.-- -...|+++|||+++|-.-|
T Consensus 219 ~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~ 263 (298)
T 3fs2_A 219 FDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETHE 263 (298)
T ss_dssp EEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred EcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecC
Confidence 96 3433322 2447889999999998754
No 376
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=89.19 E-value=4.2 Score=38.94 Aligned_cols=87 Identities=11% Similarity=0.064 Sum_probs=45.3
Q ss_pred eeEcCcccCCceEecccccccccCChh---hHHHHHHHHHcCCceecCCCCCCCHHHHhccCCCceEEEeeecCCHHHHH
Q 017781 63 TTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVA 139 (366)
Q Consensus 63 t~l~g~~l~~Pi~iApm~~~~l~~~~~---e~~la~aa~~~G~~~~vs~~~~~~~e~i~~~~~~~~~~Qly~~~d~~~~~ 139 (366)
.+|.+.++++-|++|||+-.. ..+++ +..+.--.+++..++++.+....+.+ ....+. -.-+|....-+..+
T Consensus 16 ~~ig~~~lkNRiv~aPm~~~~-a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~--g~~~~~--~~gi~~d~~i~~~k 90 (361)
T 3gka_A 16 LTIGDLTLANRIIMAPLTRAR-AGDTRTPNALMARYYAERASAGLIISEATSVTPQ--GVGYAS--TPGIWSPEQVDGWR 90 (361)
T ss_dssp EEETTEEESCSEEECCCCCCC-STTTTCCCHHHHHHHHTTTTSSEEEEEEEESSGG--GCCSTT--CCBSSSHHHHHHHH
T ss_pred eeECCEEecCccEECCCCCCc-cCCCCCCCHHHHHHHHHHHhCCEEEEcceeeccc--ccCCCC--CCccCCHHHHHHHH
Confidence 578899999999999997532 32333 22222222222245555544333321 111221 11133222234466
Q ss_pred HHHHHHHHcCCCEEE
Q 017781 140 QLVRRAERAGFKAIA 154 (366)
Q Consensus 140 ~~l~ra~~~G~~ai~ 154 (366)
++.+.+.+.|++.++
T Consensus 91 ~l~~avH~~G~~i~~ 105 (361)
T 3gka_A 91 LVTDAVHAAGGRIFL 105 (361)
T ss_dssp HHHHHHHHTTCCEEE
T ss_pred HHHHHHHhcCCeEEE
Confidence 777888888987643
No 377
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=88.79 E-value=6.9 Score=36.90 Aligned_cols=100 Identities=16% Similarity=0.215 Sum_probs=69.5
Q ss_pred HHcCCcEEEEcC---CCccCCCCCcc----hHHHHHHHHHHcCCCceEEEecCC----------------------CCHH
Q 017781 239 VQAGAAGIIVSN---HGARQLDYVPA----TIMALEEVVKATQGRIPVFLDGGV----------------------RRGT 289 (366)
Q Consensus 239 ~~aGad~I~vs~---~gg~~~~~~~~----~~~~l~~i~~~~~~~i~vi~~GGI----------------------~~~~ 289 (366)
.+.|+|.+-++. ||-+... +.+ .++.|.+|.+.+ ++|+..=||= -.-+
T Consensus 163 ~~TgvD~LAvaiGt~HG~Yk~~-~~p~~~L~~~~L~~I~~~~--~vpLVlHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e 239 (323)
T 2isw_A 163 ELTGVDALAVAIGTSHGAYKFK-SESDIRLAIDRVKTISDLT--GIPLVMHGSSSVPKDVKDMINKYGGKMPDAVGVPIE 239 (323)
T ss_dssp HHHCCSEEEECSSCCSSSBCCC-C----CCCCHHHHHHHHHH--CSCEEECSCCCCCHHHHHHHHHTTCCCTTCBCCCHH
T ss_pred HHHCCCEEEEecCccccccCCC-CCcccccCHHHHHHHHHHh--CCCeEEECCCCCCHHHHHHHHHhccccccCCCCCHH
Confidence 678999999874 5533211 333 367899999988 7999999943 1457
Q ss_pred HHHHHHHhCcCEEEecHHHHHHhhh-------cC-----H-HHHHHHHHHHHHHHHHHHHHcCCC
Q 017781 290 DVFKALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 341 (366)
Q Consensus 290 dv~kalalGAd~V~igr~~l~~l~~-------~G-----~-~gv~~~~~~l~~el~~~m~~~G~~ 341 (366)
++.||+.+|..-|-|++-+-++... .. + .-+....+.+++.++..|..+|+.
T Consensus 240 ~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 304 (323)
T 2isw_A 240 SIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSA 304 (323)
T ss_dssp HHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8999999999999999976554211 01 1 123334467888888889999875
No 378
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=88.54 E-value=3.8 Score=38.66 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=57.9
Q ss_pred CCceEEEeee------cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccc
Q 017781 122 PGIRFFQLYV------YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEA 195 (366)
Q Consensus 122 ~~~~~~Qly~------~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (366)
.-+.++.|.. ..+.+...+++++++++|++.|.++...... .. .|
T Consensus 209 ~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~--------~~--~~------------------- 259 (338)
T 1z41_A 209 DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVH--------AD--IN------------------- 259 (338)
T ss_dssp CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSC--------CC--CC-------------------
T ss_pred CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc--------CC--CC-------------------
Confidence 4466777654 2356667788889999999998775321100 00 00
Q ss_pred cchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEecc-CHHH----HHcC-CcEEEE
Q 017781 196 NDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVL-TAED----VQAG-AAGIIV 248 (366)
Q Consensus 196 ~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~-~~~d----~~aG-ad~I~v 248 (366)
..+...++.++++|+.+++||+.-|.. +.++ .+.| ||.|.+
T Consensus 260 ------------~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 260 ------------VFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp ------------CCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred ------------CCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEee
Confidence 012346788999999999999987654 7776 7777 999976
No 379
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=88.51 E-value=5.6 Score=34.85 Aligned_cols=57 Identities=16% Similarity=0.213 Sum_probs=41.1
Q ss_pred CcEEEEcCC-Cc--cCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHH
Q 017781 243 AAGIIVSNH-GA--RQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 243 ad~I~vs~~-gg--~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~ 308 (366)
+|++.+... || ...|| +.++++.. ...|++..||+ +++.+.+|+.+++.+|=+.+-+
T Consensus 118 ~d~~LlD~~~gGtG~~fdW-----~~l~~~~~---~~~p~~LAGGL-~peNV~~ai~~~p~gVDvsSGv 177 (203)
T 1v5x_A 118 AQALLLDGKRPGSGEAYPR-----AWAKPLLA---TGRRVILAGGI-APENLEEVLALRPYALDLASGV 177 (203)
T ss_dssp CSEEEEECSSTTSCCCCCG-----GGGHHHHH---TTSCEEECSSC-CSTTHHHHHHHCCSEEEESGGG
T ss_pred CCEEEEcCCCCCCCCccCH-----HHHHhhhc---cCCcEEEECCC-CHHHHHHHHhcCCCEEEeCCce
Confidence 899998864 33 33444 33443211 25799999999 7889999997799999998754
No 380
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=88.23 E-value=1.6 Score=40.81 Aligned_cols=58 Identities=28% Similarity=0.496 Sum_probs=42.4
Q ss_pred HHcCCc----EEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC--HHHHH----HHHH-hCcCEEEecHH
Q 017781 239 VQAGAA----GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR--GTDVF----KALA-LGASGIFIGRP 307 (366)
Q Consensus 239 ~~aGad----~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~--~~dv~----kala-lGAd~V~igr~ 307 (366)
.+.|+| .|.+-= + +...++.+.. .+||+..||=.+ .++++ .++. .||.++.+||-
T Consensus 210 aELGADs~~tivK~~y----------~--e~f~~Vv~a~--~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRN 275 (307)
T 3fok_A 210 AGLGNDSSYTWMKLPV----------V--EEMERVMEST--TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRT 275 (307)
T ss_dssp HTCSSCCSSEEEEEEC----------C--TTHHHHGGGC--SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTT
T ss_pred HHhCCCcCCCEEEeCC----------c--HHHHHHHHhC--CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechh
Confidence 889999 888621 1 3346666666 699999998874 45655 5667 59999999998
Q ss_pred HHH
Q 017781 308 VVY 310 (366)
Q Consensus 308 ~l~ 310 (366)
+++
T Consensus 276 IfQ 278 (307)
T 3fok_A 276 LLY 278 (307)
T ss_dssp TSS
T ss_pred hcc
Confidence 754
No 381
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=88.22 E-value=4.4 Score=35.98 Aligned_cols=83 Identities=20% Similarity=0.316 Sum_probs=55.2
Q ss_pred hccCCCceEEEe---eecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCcc
Q 017781 118 ASTGPGIRFFQL---YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDE 194 (366)
Q Consensus 118 ~~~~~~~~~~Ql---y~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~ 194 (366)
++..+ |.++.+ -...+.+.+.++.+.++++|++++.. ++ ++.
T Consensus 112 ~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~t--st------------g~~-------------------- 156 (225)
T 1mzh_A 112 FRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKT--ST------------GFA-------------------- 156 (225)
T ss_dssp HHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEEC--CC------------SCS--------------------
T ss_pred HHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEE--CC------------CCC--------------------
Confidence 33443 667776 33346666788888999999999832 21 110
Q ss_pred ccchhhHHHhhhccCCCCCHHHHHHHHHhc--CCCEEEEe-ccCHHH----HHcCCcEEEEc
Q 017781 195 ANDSGLAAYVAGQIDRSLSWKDVKWLQTIT--KLPILVKG-VLTAED----VQAGAAGIIVS 249 (366)
Q Consensus 195 ~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~--~~pv~vK~-v~~~~d----~~aGad~I~vs 249 (366)
.+..+|+.++.+++.+ ++||+.=| +.+.+| .++|||.|-++
T Consensus 157 --------------~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s 204 (225)
T 1mzh_A 157 --------------PRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTS 204 (225)
T ss_dssp --------------SSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred --------------CCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHc
Confidence 1124788999999887 57777665 467777 88999976443
No 382
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=88.06 E-value=2.4 Score=39.86 Aligned_cols=76 Identities=17% Similarity=0.144 Sum_probs=54.6
Q ss_pred HHHHHHHHhcCCCEEEEecc---CHHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCC
Q 017781 215 KDVKWLQTITKLPILVKGVL---TAED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 286 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~vK~v~---~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~ 286 (366)
+.++++++.++.|+.+.... +.++ .++|+|.|.++. | .+ .+.+..+++ . .++|+. ++.
T Consensus 67 ~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~--g------~p-~~~~~~l~~-~--g~~v~~--~v~ 132 (326)
T 3bo9_A 67 KAISELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGA--G------NP-TKYIRELKE-N--GTKVIP--VVA 132 (326)
T ss_dssp HHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEES--S------CC-HHHHHHHHH-T--TCEEEE--EES
T ss_pred HHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECC--C------Cc-HHHHHHHHH-c--CCcEEE--EcC
Confidence 45788888778899888664 2233 789999998733 2 12 334444443 2 577775 588
Q ss_pred CHHHHHHHHHhCcCEEEe
Q 017781 287 RGTDVFKALALGASGIFI 304 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~i 304 (366)
+.+++.++...|||++.+
T Consensus 133 s~~~a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 133 SDSLARMVERAGADAVIA 150 (326)
T ss_dssp SHHHHHHHHHTTCSCEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 999999999999999998
No 383
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=88.04 E-value=12 Score=35.02 Aligned_cols=101 Identities=24% Similarity=0.264 Sum_probs=69.5
Q ss_pred HHcCCcEEEEcC---CCccCCCCC-cchHHHHHHHHHHcCCCceEEEecCC---------------------C-CHHHHH
Q 017781 239 VQAGAAGIIVSN---HGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGV---------------------R-RGTDVF 292 (366)
Q Consensus 239 ~~aGad~I~vs~---~gg~~~~~~-~~~~~~l~~i~~~~~~~i~vi~~GGI---------------------~-~~~dv~ 292 (366)
.+.|+|.+-++. ||-+..++. .-.++.|.+|.+.+ .+|+..=||= . .-+++.
T Consensus 163 ~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~--~vpLVlHGgSsv~~~~~~~~~~~gg~~~~~~G~p~e~i~ 240 (305)
T 1rvg_A 163 ERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV--PAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIK 240 (305)
T ss_dssp HHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHC--CSCEEECSCCCCCHHHHHHHHHTTCCCCSCBCCCHHHHH
T ss_pred HHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhc--CCCEEEeCCCCCcHHHHHHHHhhccccccCCCCCHHHHH
Confidence 567999999874 554332222 23678999999998 6999998875 3 456788
Q ss_pred HHHHhCcCEEEecHHHHHHhhh-------cC-----H-HHHHHHHHHHHHHHHHHHHHcCCC
Q 017781 293 KALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 341 (366)
Q Consensus 293 kalalGAd~V~igr~~l~~l~~-------~G-----~-~gv~~~~~~l~~el~~~m~~~G~~ 341 (366)
||+.+|..-|-|++-+-++... .. + .-+....+.+++.++..|..+|+.
T Consensus 241 ~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 302 (305)
T 1rvg_A 241 KAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSV 302 (305)
T ss_dssp HHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHCCCeEEEEChHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999976554211 01 1 123334466777888888888864
No 384
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.01 E-value=16 Score=33.58 Aligned_cols=175 Identities=17% Similarity=0.143 Sum_probs=95.9
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCceec-----CCCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-----SSWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v-----s~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
.|.++.|+.-. -...++-..+++-.-+.|+...+ |++.+.+.+|..+ . .. .|.+...- ..+.+.
T Consensus 8 ~~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 85 (292)
T 3daq_A 8 GVALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEK 85 (292)
T ss_dssp EEECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred EEeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHH
Confidence 34456666433 23333445677777778875543 3344566665422 1 22 35666654 346666
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHH
Q 017781 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDV 217 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 217 (366)
..++.++++++|++++.+. +|... + | ..+-..+..
T Consensus 86 ai~la~~a~~~Gadavlv~--~P~y~-~----------~--------------------------------~~~~l~~~f 120 (292)
T 3daq_A 86 SIQASIQAKALGADAIMLI--TPYYN-K----------T--------------------------------NQRGLVKHF 120 (292)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCCSS-C----------C--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCCC-C----------C--------------------------------CHHHHHHHH
Confidence 7788999999999998874 23210 0 0 000012334
Q ss_pred HHHHHhcCCCEEEEec-------cCHHH----HHcC-CcEEEEcCCCccCCCCCcchHHHHHHHHHHcCC-CceEEEecC
Q 017781 218 KWLQTITKLPILVKGV-------LTAED----VQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQG-RIPVFLDGG 284 (366)
Q Consensus 218 ~~lr~~~~~pv~vK~v-------~~~~d----~~aG-ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~-~i~vi~~GG 284 (366)
+.+-+.+++||++=.+ ++++. .+.. +-+|.-+. ..+..+.++.+..++ ++.|+ +|.
T Consensus 121 ~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~ss----------gd~~~~~~~~~~~~~~~f~v~-~G~ 189 (292)
T 3daq_A 121 EAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDAT----------NDFEYLEEVKKRIDTNSFALY-SGN 189 (292)
T ss_dssp HHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECC----------CCHHHHHHHHTTSCTTTSEEE-ESC
T ss_pred HHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEEeCC----------CCHHHHHHHHHHCCCCCEEEE-ECC
Confidence 5555566788887754 23333 2211 11121111 134556666666654 56554 453
Q ss_pred CCCHHHHHHHHHhCcCEEEecHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~ 307 (366)
...++.++++||+++.-+..
T Consensus 190 ---d~~~~~~l~~G~~G~is~~~ 209 (292)
T 3daq_A 190 ---DDNVVEYYQRGGQGVISVIA 209 (292)
T ss_dssp ---GGGHHHHHHTTCCEEEESGG
T ss_pred ---HHHHHHHHhcCCCEEEeCHH
Confidence 34478899999999988864
No 385
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=87.88 E-value=1.8 Score=40.14 Aligned_cols=125 Identities=19% Similarity=0.283 Sum_probs=68.0
Q ss_pred CHHHHHHHHHhcCCCEEEEecc--CHHH--------HHcCCcEEEEcCCCccCCCCC--cchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTITKLPILVKGVL--TAED--------VQAGAAGIIVSNHGARQLDYV--PATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~--~~~d--------~~aGad~I~vs~~gg~~~~~~--~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++++-+ +++||++|..+ +++| .+.|.+-|++--.|- ..... ...+..++.+++.. +.+||+
T Consensus 123 n~~LLr~va~-~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~-~y~~~~~~vdl~~i~~lk~~~-~~~pV~ 199 (285)
T 3sz8_A 123 QTDLVVAIAK-AGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGS-SFGYDNLVVDMLGFRQMAETT-GGCPVI 199 (285)
T ss_dssp CHHHHHHHHH-TSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCE-ECSSSCEECCTTHHHHHHHHT-TSCCEE
T ss_pred CHHHHHHHHc-cCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCC-CCCCCcCccCHHHHHHHHHhC-CCCCEE
Confidence 4456666654 68999999764 6665 677887676643332 11111 12456677776654 138999
Q ss_pred Eec---------------CCCCH--HHHHHHHHhCcCEEEecHHHHHHh-hhcCHHHH-HHHHHHHHHHHHHHHHHcCC
Q 017781 281 LDG---------------GVRRG--TDVFKALALGASGIFIGRPVVYSL-AAEGEKGV-RRVLEMLREEFELAMALSGC 340 (366)
Q Consensus 281 ~~G---------------GI~~~--~dv~kalalGAd~V~igr~~l~~l-~~~G~~gv-~~~~~~l~~el~~~m~~~G~ 340 (366)
+|. |-|.- .-...|+++|||+++|-.-+--.- .+.|+..+ -+-++.|.++++..-..+|.
T Consensus 200 ~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~~pd~al~D~~~sl~p~el~~lv~~i~~i~~~lg~ 278 (285)
T 3sz8_A 200 FDVTHSLQCRDPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHPDPDRARCDGPSALPLHQLEGLLSQMKAIDDLVKR 278 (285)
T ss_dssp EETTTTCC---------------HHHHHHHHHHHCCSEEEEEEESCGGGCSCSSCCCEEGGGHHHHHHHHHHHHHHHTT
T ss_pred EeCCCccccCCCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEeccChhccCCchhhccCHHHHHHHHHHHHHHHHHhCC
Confidence 963 32221 234578899999999987542111 12332110 01233455555555555554
No 386
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=87.82 E-value=9.2 Score=35.95 Aligned_cols=62 Identities=26% Similarity=0.239 Sum_probs=44.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe---cCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~---GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.++|||.|.+-+ +++.+.+.++.+.+ ++|++++ +|-...-++.+.-++|...|.++...+.+
T Consensus 199 ~eAGAd~i~~e~---------~~~~e~~~~i~~~l--~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ra 263 (318)
T 1zlp_A 199 KEAGADATFVEA---------PANVDELKEVSAKT--KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAVYA 263 (318)
T ss_dssp HHTTCSEEEECC---------CCSHHHHHHHHHHS--CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHHHH
T ss_pred HHcCCCEEEEcC---------CCCHHHHHHHHHhc--CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHHHH
Confidence 999999998732 35678888899888 6898543 33222223445556899999999877665
No 387
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=87.77 E-value=7.7 Score=36.21 Aligned_cols=63 Identities=16% Similarity=0.150 Sum_probs=41.5
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe---cCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~---GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.++|||+|-+-+ +.+.+.+.++.+.++ .+|+.++ +|-...-.+.+.-++|.+.|..+...+.+
T Consensus 180 ~eAGAD~ifi~g---------~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~ra 245 (302)
T 3fa4_A 180 RDAGADVGFLEG---------ITSREMARQVIQDLA-GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALGP 245 (302)
T ss_dssp HTTTCSEEEETT---------CCCHHHHHHHHHHTT-TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHH
T ss_pred HHcCCCEEeecC---------CCCHHHHHHHHHHhc-CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 899999998733 345677788888874 3677663 33211123344445799999999877654
No 388
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=87.68 E-value=16 Score=33.30 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=25.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEec
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 283 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~G 283 (366)
.++|||+|++-. .+ .+...++.+.+ ++|+|.-|
T Consensus 171 ~eAGA~~ivlE~---------vp-~~~a~~it~~l--~iP~igIG 203 (264)
T 1m3u_A 171 EAAGAQLLVLEC---------VP-VELAKRITEAL--AIPVIGIG 203 (264)
T ss_dssp HHHTCCEEEEES---------CC-HHHHHHHHHHC--SSCEEEES
T ss_pred HHCCCcEEEEec---------CC-HHHHHHHHHhC--CCCEEEeC
Confidence 899999998733 23 35677888888 79999866
No 389
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=87.67 E-value=13 Score=35.20 Aligned_cols=84 Identities=17% Similarity=0.098 Sum_probs=49.4
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCcee--cC---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LS---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~--vs---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
.|.++.|+.-.+-...++-..+++-.-+.|+... ++ +..+.+.+|-.+ . .+ .|.+...- ..+.+.
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~e 114 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-GTNARE 114 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 4566677642222223333466666667887543 33 334566665432 1 22 35666654 345666
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q 017781 138 VAQLVRRAERAGFKAIALT 156 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vt 156 (366)
..++.+.|+++|++++.+.
T Consensus 115 ai~la~~A~~~Gadavlv~ 133 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVI 133 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 7788899999999998874
No 390
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=87.67 E-value=17 Score=33.54 Aligned_cols=84 Identities=8% Similarity=0.012 Sum_probs=50.1
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCceec-----CCCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-----SSWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v-----s~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
.|.++.|+.-.+-...++-..+++-.-+.|+...+ |+..+.+.+|..+ . .. -|.+...- ..+.+.
T Consensus 9 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 87 (300)
T 3eb2_A 9 FPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA-STSVAD 87 (300)
T ss_dssp EEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE-ESSHHH
T ss_pred EEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 34455666422222233334666666778875543 3344567765432 1 22 35666664 356666
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q 017781 138 VAQLVRRAERAGFKAIALT 156 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vt 156 (366)
..++.++++++|++++.+.
T Consensus 88 ai~la~~a~~~Gadavlv~ 106 (300)
T 3eb2_A 88 AVAQAKLYEKLGADGILAI 106 (300)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 7788999999999998873
No 391
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=87.66 E-value=17 Score=33.42 Aligned_cols=174 Identities=14% Similarity=0.175 Sum_probs=95.7
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHHH
Q 017781 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (366)
Q Consensus 73 Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~~ 138 (366)
|.++.|+ -.+-...++-..+++-.-+.|+...+ + +..+.+.+|-.+ . .. .|.+...- ..+.+..
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 3344555 22223333345677777778876543 3 344566665432 1 22 45666654 3455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHH
Q 017781 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVK 218 (366)
Q Consensus 139 ~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 218 (366)
.++.+.++++|++++.+. +|.. ++ | ...-..+..+
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y-~~----------~--------------------------------s~~~l~~~f~ 119 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIV--SPYY-NK----------P--------------------------------TQEGIYQHFK 119 (292)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-SC----------C--------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEc--CCCC-CC----------C--------------------------------CHHHHHHHHH
Confidence 788899999999998874 2321 00 0 0000123345
Q ss_pred HHHHhcCCCEEEEec-------cCHHH----HH-c-CCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCC
Q 017781 219 WLQTITKLPILVKGV-------LTAED----VQ-A-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 285 (366)
Q Consensus 219 ~lr~~~~~pv~vK~v-------~~~~d----~~-a-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI 285 (366)
.+.+.+++||++=.+ .+++. .+ . .+-+|.-+. ..+..+.++++..++++.|+ +|
T Consensus 120 ~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK~s~----------gd~~~~~~~~~~~~~~f~v~-~G-- 186 (292)
T 2vc6_A 120 AIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVXDAT----------GNLLRPSLERMACGEDFNLL-TG-- 186 (292)
T ss_dssp HHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------CCTHHHHHHHHHSCTTSEEE-ES--
T ss_pred HHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEecCC----------CCHHHHHHHHHHcCCCEEEE-EC--
Confidence 566667888888643 34444 22 2 222333221 12334455656565567664 55
Q ss_pred CCHHHHHHHHHhCcCEEEecHH
Q 017781 286 RRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 286 ~~~~dv~kalalGAd~V~igr~ 307 (366)
+...++.++++||+++.-+.+
T Consensus 187 -~d~~~~~~l~~G~~G~is~~~ 207 (292)
T 2vc6_A 187 -EDGTALGYMAHGGHGCISVTA 207 (292)
T ss_dssp -CGGGHHHHHHTTCCEEEESGG
T ss_pred -chHHHHHHHHcCCCEEEecHH
Confidence 244578899999999888764
No 392
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=87.65 E-value=12 Score=34.59 Aligned_cols=62 Identities=24% Similarity=0.333 Sum_probs=44.0
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe-cCCCCHHHHHHHHHhCcCEEEecHHHHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD-GGVRRGTDVFKALALGASGIFIGRPVVYS 311 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~-GGI~~~~dv~kalalGAd~V~igr~~l~~ 311 (366)
.++|||.|.+-+ +++.+.+.++.+.+ ++|++.. +|-...-++.+.-++|.+.|..|...+.+
T Consensus 178 ~eAGAd~i~~e~---------~~~~~~~~~i~~~~--~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ra 240 (287)
T 3b8i_A 178 QEAGADGICLVG---------VRDFAHLEAIAEHL--HIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFA 240 (287)
T ss_dssp HHTTCSEEEEEC---------CCSHHHHHHHHTTC--CSCEEEECTTCGGGCCHHHHHHTTEEEEECCCHHHHH
T ss_pred HHcCCCEEEecC---------CCCHHHHHHHHHhC--CCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 899999998743 35677888888888 6887743 33322233445556999999999887765
No 393
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.65 E-value=18 Score=33.71 Aligned_cols=176 Identities=16% Similarity=0.174 Sum_probs=95.8
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCceec-----CCCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-----SSWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v-----s~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
.|.++.|+.-.+-...++-..+++-.-+.|+...+ |++.+.+.+|..+ . .+ .|.+...- ..+.+.
T Consensus 28 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~e 106 (314)
T 3qze_A 28 MVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTRE 106 (314)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHH
Confidence 35556666322222223334666666777875432 3344567665432 1 22 35666654 345666
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHH
Q 017781 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDV 217 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 217 (366)
..++.+.++++|++++.+. +|... + | ...-..+..
T Consensus 107 ai~la~~A~~~Gadavlv~--~P~y~-~----------~--------------------------------s~~~l~~~f 141 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLV--TPYYN-K----------P--------------------------------TQEGMYQHF 141 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS-C----------C--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCCC-C----------C--------------------------------CHHHHHHHH
Confidence 7788999999999998874 23210 0 0 000012345
Q ss_pred HHHHHhcCCCEEEEec-------cCHHH----HHc-CCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCC
Q 017781 218 KWLQTITKLPILVKGV-------LTAED----VQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 285 (366)
Q Consensus 218 ~~lr~~~~~pv~vK~v-------~~~~d----~~a-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI 285 (366)
+.+.+.+++||++=.+ .+++. .+. .+-+|.-+. ..+..+.++.+..++++.| .+|.
T Consensus 142 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v-~~G~- 209 (314)
T 3qze_A 142 RHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGIKEAT----------GDLQRAKEVIERVGKDFLV-YSGD- 209 (314)
T ss_dssp HHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECS----------CCHHHHHHHHHHSCTTSEE-EESC-
T ss_pred HHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEEcCC----------CCHHHHHHHHHHcCCCeEE-EecC-
Confidence 5566667888887754 23333 211 112222111 2344555666666556665 4453
Q ss_pred CCHHHHHHHHHhCcCEEEecHH
Q 017781 286 RRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 286 ~~~~dv~kalalGAd~V~igr~ 307 (366)
..-++.++++||+++.-+..
T Consensus 210 --d~~~l~~l~~Ga~G~is~~a 229 (314)
T 3qze_A 210 --DATAVELMLLGGKGNISVTA 229 (314)
T ss_dssp --GGGHHHHHHTTCCEEEESGG
T ss_pred --hHHHHHHHHCCCCEEEecHH
Confidence 23478899999999987764
No 394
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=87.51 E-value=2 Score=40.49 Aligned_cols=100 Identities=18% Similarity=0.127 Sum_probs=60.5
Q ss_pred CceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHH
Q 017781 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAA 202 (366)
Q Consensus 123 ~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (366)
.|.++.+....+.+.+.++++.++++|+++|.++-.... |. +.+ .+. .. .... +.
T Consensus 212 ~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~---~~-~~~----~~~---~~----------~~~g--g~-- 266 (336)
T 1f76_A 212 VPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLD---RS-LVQ----GMK---NC----------DQTG--GL-- 266 (336)
T ss_dssp CCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCC---CT-TST----TST---TT----------TCSS--EE--
T ss_pred CceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCccc---cc-ccc----ccc---cc----------ccCC--Cc--
Confidence 578888765556666788889999999999988632111 11 100 000 00 0000 00
Q ss_pred HhhhccCCCCCHHHHHHHHHhc--CCCEEEEe-ccCHHH----HHcCCcEEEEc
Q 017781 203 YVAGQIDRSLSWKDVKWLQTIT--KLPILVKG-VLTAED----VQAGAAGIIVS 249 (366)
Q Consensus 203 ~~~~~~d~~~~~~~i~~lr~~~--~~pv~vK~-v~~~~d----~~aGad~I~vs 249 (366)
.........++.++++++.+ ++||+.=| +.+.+| .++|||+|.+.
T Consensus 267 --~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 267 --SGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIY 318 (336)
T ss_dssp --EEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred --CCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEee
Confidence 00000123567889999988 79988775 568887 78999999773
No 395
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=87.34 E-value=5.5 Score=34.80 Aligned_cols=40 Identities=25% Similarity=0.340 Sum_probs=33.1
Q ss_pred CCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcC
Q 017781 211 SLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~ 250 (366)
...|+.++++++..++|+++-|..+.++ .++|+|+|.++.
T Consensus 150 ~~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 150 GRGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp -CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTTCSEEEESH
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcCCCEEEEhH
Confidence 4578889999988899999988778776 789999999854
No 396
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=87.23 E-value=18 Score=33.25 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=25.5
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEec
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 283 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~G 283 (366)
.++|||+|++-. .+ .+...++.+.+ ++|+|.-|
T Consensus 171 ~eAGA~~ivlE~---------vp-~~~a~~it~~l--~iP~igIG 203 (275)
T 1o66_A 171 DDAGAAVVLMEC---------VL-AELAKKVTETV--SCPTIGIG 203 (275)
T ss_dssp HHTTCSEEEEES---------CC-HHHHHHHHHHC--SSCEEEES
T ss_pred HHcCCcEEEEec---------CC-HHHHHHHHHhC--CCCEEEEC
Confidence 899999998733 23 36677888888 79999866
No 397
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=87.22 E-value=19 Score=33.56 Aligned_cols=176 Identities=15% Similarity=0.147 Sum_probs=95.3
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
.|.++.|+.-.+-...++-..+++-.-+.|+...+ + +..+.+.+|..+ . .+ .|.+...- ..+...
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ 105 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSE 105 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 34556666422222233334666677778876543 2 234556665432 1 22 35666654 346666
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHH
Q 017781 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDV 217 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 217 (366)
..++.+.++++|++++.+. +|... + | ...-..+..
T Consensus 106 ai~la~~A~~~Gadavlv~--~P~y~-~----------~--------------------------------~~~~l~~~f 140 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVV--TPYYN-R----------P--------------------------------NQRGLYTHF 140 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS-C----------C--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCCC-C----------C--------------------------------CHHHHHHHH
Confidence 7788899999999998873 23210 0 0 000012334
Q ss_pred HHHHHhcCCCEEEEec-------cCHHH----HH-c-CCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecC
Q 017781 218 KWLQTITKLPILVKGV-------LTAED----VQ-A-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 284 (366)
Q Consensus 218 ~~lr~~~~~pv~vK~v-------~~~~d----~~-a-Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GG 284 (366)
+.+-+.+++||++=.+ .+++. .+ . .+-+|.-+. ..+..+.++.+..++++.| .+|.
T Consensus 141 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~l~~~~~~~f~v-~~G~ 209 (315)
T 3si9_A 141 SSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVKDAT----------GKIERASEQREKCGKDFVQ-LSGD 209 (315)
T ss_dssp HHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------CCTHHHHHHHHHHCSSSEE-EESC
T ss_pred HHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEEEEEeCC----------CCHHHHHHHHHHcCCCeEE-EecC
Confidence 5555666778777754 23333 22 1 222332221 1233445555555556666 4453
Q ss_pred CCCHHHHHHHHHhCcCEEEecHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~ 307 (366)
..-++.++++||+++.-+..
T Consensus 210 ---d~~~l~~l~~G~~G~is~~a 229 (315)
T 3si9_A 210 ---DCTALGFNAHGGVGCISVSS 229 (315)
T ss_dssp ---GGGHHHHHHTTCCEEEESGG
T ss_pred ---HHHHHHHHHcCCCEEEecHH
Confidence 34567889999999997764
No 398
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=87.19 E-value=1.2 Score=43.65 Aligned_cols=99 Identities=21% Similarity=0.317 Sum_probs=62.3
Q ss_pred Cc-eEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhH
Q 017781 123 GI-RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLA 201 (366)
Q Consensus 123 ~~-~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (366)
.| .++.|-+..+.+.+.++++.++++|+++|+++--+. .|. |+.. + .+ ... +
T Consensus 269 ~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~---~r~-dl~~-~--------~~----------~~G--G-- 321 (415)
T 3i65_A 269 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT---QIN-DIKS-F--------EN----------KKG--G-- 321 (415)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBS---CCC-CCGG-G--------TT----------CCS--E--
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCc---ccc-cccc-c--------cc----------ccC--C--
Confidence 46 688887767777788999999999999998752111 110 0000 0 00 000 0
Q ss_pred HHhhhccCCCCCHHHHHHHHHhc--CCCEEEE-eccCHHH----HHcCCcEEEEcC
Q 017781 202 AYVAGQIDRSLSWKDVKWLQTIT--KLPILVK-GVLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 202 ~~~~~~~d~~~~~~~i~~lr~~~--~~pv~vK-~v~~~~d----~~aGad~I~vs~ 250 (366)
++.....+.+++.|+++++.+ ++|||.= ++.+.+| ..+|||+|.+..
T Consensus 322 --lSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgr 375 (415)
T 3i65_A 322 --VSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYS 375 (415)
T ss_dssp --EEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESH
T ss_pred --cCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcH
Confidence 000001123568899999988 6898776 4578888 889999998743
No 399
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=87.10 E-value=8.6 Score=37.04 Aligned_cols=85 Identities=8% Similarity=-0.047 Sum_probs=62.6
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
..+.++.+|+.+ +.++.+..- .+.++ .+.|+++|- +. ..+..++.+.++++.+ .+||.
T Consensus 185 ~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~--~iPIa 254 (388)
T 3tcs_A 185 TEEIIPTMRRELGDDVDLLIDANSCYTPDRAIEVGHMLQDHGFCHFE-------EP-CPYWELAQTKQVTDAL--DIDVT 254 (388)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHHHTTCCEEE-------CC-SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCeEEE-------CC-CCccCHHHHHHHHHhc--CCCEE
Confidence 345688888887 567888743 35444 566777763 11 1223577888888887 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
++.-+.+..|+.+++..| +|.|++--.
T Consensus 255 ~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 282 (388)
T 3tcs_A 255 GGEQDCDLPTWQRMIDMRAVDIVQPDIL 282 (388)
T ss_dssp ECTTCCCHHHHHHHHHHTCCSEECCCHH
T ss_pred cCCccCCHHHHHHHHHcCCCCEEEeCcc
Confidence 999999999999999987 799988743
No 400
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=86.97 E-value=0.98 Score=41.89 Aligned_cols=99 Identities=16% Similarity=0.179 Sum_probs=55.3
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|....-... ..+.+..+++.+.+ -|...|+. +-
T Consensus 15 g~iD~~~l~~lv~~l--------------i~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~-~t 77 (288)
T 2nuw_A 15 GKVNVDALKTHAKNL--------------LEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSL-NL 77 (288)
T ss_dssp SCBCHHHHHHHHHHH--------------HHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCS-CH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCC-CH
Confidence 455666665555432 56799999998876632211111 12334444444433 23344444 44
Q ss_pred HHHHH----HHHhCcCEEEecHHHHHH-hhhcCHHHHHHHHHHHH
Q 017781 289 TDVFK----ALALGASGIFIGRPVVYS-LAAEGEKGVRRVLEMLR 328 (366)
Q Consensus 289 ~dv~k----alalGAd~V~igr~~l~~-l~~~G~~gv~~~~~~l~ 328 (366)
.++++ |-.+|||++++-.|+++. . .++++.++++.+.
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~---s~~~l~~~f~~va 119 (288)
T 2nuw_A 78 NDVMELVKFSNEMDILGVSSHSPYYFPRL---PEKFLAKYYEEIA 119 (288)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCCCSSCSC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCC---CHHHHHHHHHHHH
Confidence 44442 233799999999998764 2 4566655555544
No 401
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=86.91 E-value=5.5 Score=38.24 Aligned_cols=84 Identities=14% Similarity=0.069 Sum_probs=57.1
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.++.+|+.+ +.++.+..- .+.++ .+.|+.+|- + ...+..++.+.++++.. .+||++
T Consensus 181 ~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~ipIa~ 250 (382)
T 3dgb_A 181 LAHVIAIKKALGDSASVRVDVNQAWDEAVALRACRILGGNGIDLIE-------Q-PISRNNRAGMVRLNASS--PAPIMA 250 (382)
T ss_dssp HHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHHHTTTCCCEE-------C-CBCTTCHHHHHHHHHHC--SSCEEE
T ss_pred HHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHhhcCcCeee-------C-CCCccCHHHHHHHHHhC--CCCEEe
Confidence 44566666665 355666532 23333 345555553 1 11233577888888877 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
+.-+.+..|+.+++..| +|.|++--.
T Consensus 251 dE~~~~~~~~~~~~~~~~~d~v~~k~~ 277 (382)
T 3dgb_A 251 DESIECVEDAFNLAREGAASVFALKIA 277 (382)
T ss_dssp STTCSSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999999999987 799998743
No 402
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=86.85 E-value=6.8 Score=37.11 Aligned_cols=96 Identities=14% Similarity=0.159 Sum_probs=61.6
Q ss_pred CHHHHHHHHHh--cCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCC-----C--------cchHHHHHHHHHH-
Q 017781 213 SWKDVKWLQTI--TKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDY-----V--------PATIMALEEVVKA- 272 (366)
Q Consensus 213 ~~~~i~~lr~~--~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~-----~--------~~~~~~l~~i~~~- 272 (366)
+|+-++.++.. -++++-+-.+.+... .++|+..|.. .-||-.|| + -+.+..+.++.+.
T Consensus 140 T~eGl~A~~~L~~~GI~~N~TliFS~~Qa~~aa~AGa~~ISP--FVgRi~D~~~~~~g~~~~~~~~d~Gv~~v~~i~~~y 217 (334)
T 3hjz_A 140 TWEGIKAAEILEKEGIKCNLTLLFNFCQAVTCANANITLISP--FVGRILDWHKAKTGKTSFIGAEDPGVISVTQIYKYF 217 (334)
T ss_dssp SHHHHHHHHHHHHTTCCEEEESCCSHHHHHHHHHTTCSEECC--BHHHHHHHHHHHHCCCCCCGGGCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEe--eccHHHHHhhhccCCcccccccCcHHHHHHHHHHHH
Confidence 56544444432 289999999999887 8999987743 22332111 1 1234445555443
Q ss_pred --cCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhh
Q 017781 273 --TQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 273 --~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~ 313 (366)
.+.+..|++. .+|+..+|.. .+|+|.+-|.-.++..+.
T Consensus 218 ~~~g~~T~vl~A-SfRn~~~v~~--laG~d~~Tipp~ll~~L~ 257 (334)
T 3hjz_A 218 KEKGFKTEVMGA-SFRNLDEIKE--LAGCDLLTIAPKFLEELK 257 (334)
T ss_dssp HHHTCCCEEEEB-CCSSHHHHHH--TTTCSEEEECHHHHHHHH
T ss_pred HHcCCCCEEEEe-cCCCHHHHHH--HhCCCEEEcCHHHHHHHH
Confidence 3335556655 5999999997 469999999988877653
No 403
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=86.84 E-value=1.9 Score=42.26 Aligned_cols=83 Identities=10% Similarity=-0.131 Sum_probs=61.8
Q ss_pred HHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 214 WKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 214 ~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.++.+|+.+ +.+|.+..- .+.++ .+.|+++|-- ...+..++.+.++++.+ .+||++
T Consensus 215 ~e~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~ 284 (426)
T 4e4f_A 215 PKLFEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWMED--------PTPAENQACFRLIRQHT--VTPIAV 284 (426)
T ss_dssp HHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEEC--------CSCCSSGGGGHHHHTTC--CSCEEE
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEEC--------CCChHHHHHHHHHHhcC--CCCEEe
Confidence 46789999988 588888843 45554 6678887741 01122455667777766 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
+.-+.+..|+.+++..| +|.|++--
T Consensus 285 dE~~~~~~~~~~~i~~ga~d~v~~k~ 310 (426)
T 4e4f_A 285 GEVFNSIWDCKQLIEEQLIDYIRTTI 310 (426)
T ss_dssp CTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999988 79998753
No 404
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=86.81 E-value=19 Score=33.17 Aligned_cols=82 Identities=13% Similarity=0.014 Sum_probs=48.4
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHHH
Q 017781 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (366)
Q Consensus 73 Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~~ 138 (366)
|.++.|+ -.+-...++-..+++-.-+.|+...+ + +..+.+.+|-.+ . .. .|.+...- ..+.+..
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHH
Confidence 3445555 22223333345666767778876543 3 344566665432 1 22 35666654 3455667
Q ss_pred HHHHHHHHHcCCCEEEEe
Q 017781 139 AQLVRRAERAGFKAIALT 156 (366)
Q Consensus 139 ~~~l~ra~~~G~~ai~vt 156 (366)
.++.+.++++|++++.+.
T Consensus 85 i~la~~A~~~Gadavlv~ 102 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCV 102 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 788899999999998873
No 405
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=86.75 E-value=1.4 Score=40.94 Aligned_cols=99 Identities=18% Similarity=0.261 Sum_probs=56.0
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCCCceEEEecCCCCH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRG 288 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~i~vi~~GGI~~~ 288 (366)
...+++.++++.+.. .+.|+|+|++.++.|....-... ..+++..+++.+.+ -|...|+. +-
T Consensus 15 g~iD~~~l~~lv~~l--------------i~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~-~t 77 (293)
T 1w3i_A 15 NRIDKEKLKIHAENL--------------IRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGL-NL 77 (293)
T ss_dssp SSBCHHHHHHHHHHH--------------HHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCS-CH
T ss_pred CCcCHHHHHHHHHHH--------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCC-CH
Confidence 455666665554432 56799999998876632211111 22344444444443 33444444 44
Q ss_pred HHHHHHH----HhCcCEEEecHHHHHH-hhhcCHHHHHHHHHHHH
Q 017781 289 TDVFKAL----ALGASGIFIGRPVVYS-LAAEGEKGVRRVLEMLR 328 (366)
Q Consensus 289 ~dv~kal----alGAd~V~igr~~l~~-l~~~G~~gv~~~~~~l~ 328 (366)
.++++.. .+|||++++-.|+++. . .++++.++++.+.
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~---s~~~l~~~f~~va 119 (293)
T 1w3i_A 78 DDAIRLAKLSKDFDIVGIASYAPYYYPRM---SEKHLVKYFKTLC 119 (293)
T ss_dssp HHHHHHHHHGGGSCCSEEEEECCCSCSSC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCC---CHHHHHHHHHHHH
Confidence 4444322 3799999999998764 2 4566655555443
No 406
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=86.69 E-value=4.2 Score=35.34 Aligned_cols=83 Identities=14% Similarity=0.065 Sum_probs=54.2
Q ss_pred CHHHHHHHHHhcCCCEEEEecc-CHH----H-HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCC
Q 017781 213 SWKDVKWLQTITKLPILVKGVL-TAE----D-VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 286 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~-~~~----d-~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~ 286 (366)
..+.++++++.++.|+.+-+.. +.+ . .++|+|+|+++...+ ......+..+.+ . ...++.+=...
T Consensus 49 g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~~------~~~~~~~~~~~~-~--g~~i~~~~~~~ 119 (220)
T 2fli_A 49 GADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTEST------RHIHGALQKIKA-A--GMKAGVVINPG 119 (220)
T ss_dssp CHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGGC------SCHHHHHHHHHH-T--TSEEEEEECTT
T ss_pred CHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEEccCcc------ccHHHHHHHHHH-c--CCcEEEEEcCC
Confidence 4678999999888788777553 322 2 899999999865322 112233444433 2 34555554456
Q ss_pred CHHHHHHHHHhCcCEEEe
Q 017781 287 RGTDVFKALALGASGIFI 304 (366)
Q Consensus 287 ~~~dv~kalalGAd~V~i 304 (366)
+..+.++++..++|.|.+
T Consensus 120 t~~e~~~~~~~~~d~vl~ 137 (220)
T 2fli_A 120 TPATALEPLLDLVDQVLI 137 (220)
T ss_dssp SCGGGGGGGTTTCSEEEE
T ss_pred CCHHHHHHHHhhCCEEEE
Confidence 777888888888998865
No 407
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=86.68 E-value=1.2 Score=42.70 Aligned_cols=109 Identities=20% Similarity=0.151 Sum_probs=62.1
Q ss_pred cCCCceEEEeeecCCHHHHHHHHHHHHHcC-CCEEEEecCCCCCcchhHHHh-hhcCCCCccccccccccccCCCccccc
Q 017781 120 TGPGIRFFQLYVYKDRNVVAQLVRRAERAG-FKAIALTVDTPRLGRREADIK-NRFTLPPFLTLKNFQGLDLGKMDEAND 197 (366)
Q Consensus 120 ~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G-~~ai~vtvd~p~~g~r~~d~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~ 197 (366)
....|.++.+-+..|.+.+.+.++.++++| +++|.++ |+-..|-.. |+. ....+..+ ....++
T Consensus 191 ~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~-NT~~~g~~i-di~~~~~~~~~~---~~~gGl---------- 255 (354)
T 4ef8_A 191 VYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCI-NSIGNGLVI-DAETESVVIKPK---QGFGGL---------- 255 (354)
T ss_dssp HCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEEC-CCEEEEECE-ETTTTEESCSGG---GGEEEE----------
T ss_pred hhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEe-cccCcceee-eccCCccccccc---cccCCC----------
Confidence 344688999887777777777788888887 9988753 210000000 000 00000000 000000
Q ss_pred hhhHHHhhhccCCCCCHHHHHHHHHhc-CCCEEEE-eccCHHH----HHcCCcEEEEcC
Q 017781 198 SGLAAYVAGQIDRSLSWKDVKWLQTIT-KLPILVK-GVLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 198 ~~~~~~~~~~~d~~~~~~~i~~lr~~~-~~pv~vK-~v~~~~d----~~aGad~I~vs~ 250 (366)
++ . .-.+..|+.|.++++.. ++||+.= ++.+.+| ..+|||+|.+..
T Consensus 256 SG--~-----~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~vgr 307 (354)
T 4ef8_A 256 GG--R-----YVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQVGT 307 (354)
T ss_dssp EG--G-----GGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEECH
T ss_pred CC--C-----CCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEEhH
Confidence 00 0 01134788999999986 6898866 4678888 789999998743
No 408
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=86.64 E-value=4.8 Score=37.85 Aligned_cols=107 Identities=17% Similarity=0.199 Sum_probs=66.4
Q ss_pred HHHHHHHHHcCCceecCCCCCCC---HHHHhccCCCceEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhH
Q 017781 91 YATARAASAAGTIMTLSSWSTSS---VEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREA 167 (366)
Q Consensus 91 ~~la~aa~~~G~~~~vs~~~~~~---~e~i~~~~~~~~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~ 167 (366)
...++.+.+.|+.++..... .+ ++.+.+ ...+.++.+. + .+.++++++.|+++++++ .+..|.
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g-~p~~~i~~l~~-~g~~v~~~v~---~----~~~a~~~~~~GaD~i~v~--g~~~GG--- 143 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAG-NPSKYMERFHE-AGIIVIPVVP---S----VALAKRMEKIGADAVIAE--GMEAGG--- 143 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSS-CGGGTHHHHHH-TTCEEEEEES---S----HHHHHHHHHTTCSCEEEE--CTTSSE---
T ss_pred HHHHHHHHHCCCCEEEECCC-ChHHHHHHHHH-cCCeEEEEeC---C----HHHHHHHHHcCCCEEEEE--CCCCCC---
Confidence 35777888889887753332 22 233333 2234454442 2 234567788899998873 110000
Q ss_pred HHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEecc-CHHH----HHcC
Q 017781 168 DIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVL-TAED----VQAG 242 (366)
Q Consensus 168 d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~-~~~d----~~aG 242 (366)
+ .....+|+.++++++.+++||++-|.. +.++ ..+|
T Consensus 144 -----------------------------------~----~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~G 184 (332)
T 2z6i_A 144 -----------------------------------H----IGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLG 184 (332)
T ss_dssp -----------------------------------E----CCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTT
T ss_pred -----------------------------------C----CCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC
Confidence 0 001246788999999899999998765 4777 7789
Q ss_pred CcEEEEcC
Q 017781 243 AAGIIVSN 250 (366)
Q Consensus 243 ad~I~vs~ 250 (366)
||+|.++.
T Consensus 185 AdgV~vGs 192 (332)
T 2z6i_A 185 AEAVQVGT 192 (332)
T ss_dssp CSEEEECH
T ss_pred CCEEEecH
Confidence 99999853
No 409
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=86.47 E-value=6 Score=38.30 Aligned_cols=82 Identities=16% Similarity=0.055 Sum_probs=56.1
Q ss_pred HHHHHHHHHhc-CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe
Q 017781 214 WKDVKWLQTIT-KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 282 (366)
Q Consensus 214 ~~~i~~lr~~~-~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~ 282 (366)
.+.++.+|+.+ +.++.+-.- .+.++ .+.|+++|- +. .+.++.+.++++.. .+||.++
T Consensus 200 ~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~~~l~~~~i~~iE-------qP---~~d~~~~~~l~~~~--~iPIa~d 267 (398)
T 4dye_A 200 VAILRAVREALPGVNLRVDPNAAWSVPDSVRAGIALEELDLEYLE-------DP---CVGIEGMAQVKAKV--RIPLCTN 267 (398)
T ss_dssp HHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CC---SSHHHHHHHHHHHC--CSCEEES
T ss_pred HHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHHHHHhhcCCCEEc-------CC---CCCHHHHHHHHhhC--CCCEEeC
Confidence 34556666655 345555422 23333 455666663 11 12677888888877 7999999
Q ss_pred cCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 283 GGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 283 GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
.-+.+..|+.+++..| +|.|++--.
T Consensus 268 E~~~~~~~~~~~i~~~a~d~v~~k~~ 293 (398)
T 4dye_A 268 MCVVRFEDFAPAMRLNAVDVIHGDVY 293 (398)
T ss_dssp SSCCSGGGHHHHHHTTCCSEEEECHH
T ss_pred CcCCCHHHHHHHHHhCCCCEEEeCcc
Confidence 9999999999999987 899998754
No 410
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=86.46 E-value=3.6 Score=38.51 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=54.5
Q ss_pred HHHHHHHHhcCCCEEEEeccC-------HHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEe
Q 017781 215 KDVKWLQTITKLPILVKGVLT-------AED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 282 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~vK~v~~-------~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~ 282 (366)
+.++++++.++.|+.+-...+ .++ .++|+|+|.++. | .+ .+.+..+++. .++++.+
T Consensus 57 ~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~--g------~p-~~~~~~l~~~---gi~vi~~ 124 (328)
T 2gjl_A 57 AEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAG--N------DP-GEHIAEFRRH---GVKVIHK 124 (328)
T ss_dssp HHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEE--S------CC-HHHHHHHHHT---TCEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcC--C------Cc-HHHHHHHHHc---CCCEEee
Confidence 457788887778887776554 122 889999998753 2 12 3445555442 5788854
Q ss_pred cCCCCHHHHHHHHHhCcCEEEe
Q 017781 283 GGVRRGTDVFKALALGASGIFI 304 (366)
Q Consensus 283 GGI~~~~dv~kalalGAd~V~i 304 (366)
+.+..++.++...|||++.+
T Consensus 125 --v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 125 --CTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp --ESSHHHHHHHHHTTCSEEEE
T ss_pred --CCCHHHHHHHHHcCCCEEEE
Confidence 88999999999999999998
No 411
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=86.31 E-value=5.1 Score=34.94 Aligned_cols=40 Identities=23% Similarity=0.327 Sum_probs=33.1
Q ss_pred CCCHHHHHHHHHhcC-CCEEEEeccCHHH----HHcCCcEEEEcC
Q 017781 211 SLSWKDVKWLQTITK-LPILVKGVLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~-~pv~vK~v~~~~d----~~aGad~I~vs~ 250 (366)
...|+.++++++..+ +|+++-|..++++ .++|+|+|.++.
T Consensus 157 ~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 157 VQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp CCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTTCSEEEESH
T ss_pred ccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcCCCEEEEhH
Confidence 357889999998887 9999988777665 778999999854
No 412
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=86.19 E-value=2.9 Score=40.72 Aligned_cols=84 Identities=10% Similarity=0.099 Sum_probs=63.8
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.+|.+-.- .+.++ .+.|+++|--- -..+..++.+.++++.+ .+||+
T Consensus 199 d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP-------~~~~~~~~~~~~l~~~~--~iPIa 269 (410)
T 3dip_A 199 GLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGVLWVEDP-------IAKMDNIPAVADLRRQT--RAPIC 269 (410)
T ss_dssp HHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTCSEEECC-------BSCTTCHHHHHHHHHHH--CCCEE
T ss_pred HHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC-------CCCcccHHHHHHHHhhC--CCCEE
Confidence 456789999987 478888743 45555 56788888521 01223577788888877 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
++..+.+..|+.+++..| +|.|++-
T Consensus 270 ~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 270 GGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp ECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred ecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 999999999999999998 7999984
No 413
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=85.77 E-value=1.7 Score=39.65 Aligned_cols=77 Identities=22% Similarity=0.297 Sum_probs=47.7
Q ss_pred HcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHhCcC----E--EEecHHHHHHh
Q 017781 240 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGAS----G--IFIGRPVVYSL 312 (366)
Q Consensus 240 ~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~-~~dv~kalalGAd----~--V~igr~~l~~l 312 (366)
++|.|+++++.+ ..+.+..+++.+++ .+++ .=||+- +.+...+++.|+| . +.+|||++.+
T Consensus 168 ~~g~~GvV~~at----------~~~e~~~ir~~~~~-~~~l-~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A- 234 (255)
T 3qw3_A 168 VNGNVGLVVGAT----------DPVALARVRARAPT-LWFL-VPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARA- 234 (255)
T ss_dssp GGSCEEEEECSS----------CHHHHHHHHHHCSS-CCEE-ECCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTS-
T ss_pred hhCCeEEEECCC----------CHHHHHHHHHHCCC-CeEE-ECCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCC-
Confidence 479999998653 12345677777754 3454 456653 3456677788999 4 9999999875
Q ss_pred hhcCHHHHHHHHHHHHHHHHHH
Q 017781 313 AAEGEKGVRRVLEMLREEFELA 334 (366)
Q Consensus 313 ~~~G~~gv~~~~~~l~~el~~~ 334 (366)
..+ ....+.+++|+...
T Consensus 235 --~dp---~~aa~~i~~~i~~~ 251 (255)
T 3qw3_A 235 --ADP---RAAAKELCEEINAI 251 (255)
T ss_dssp --SCH---HHHHHHHHHHHHHH
T ss_pred --CCH---HHHHHHHHHHHHHH
Confidence 122 34455666666654
No 414
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=85.76 E-value=5.5 Score=34.30 Aligned_cols=40 Identities=18% Similarity=0.446 Sum_probs=32.9
Q ss_pred CCCHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcC
Q 017781 211 SLSWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 211 ~~~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~ 250 (366)
...|+.++++++..++|+++-|..++++ .++|+|++.++.
T Consensus 148 ~~~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 148 VIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp CCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTTCSEEEESH
T ss_pred CcCHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcCCCEEEEhH
Confidence 3578889999988899999988777655 788999998854
No 415
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=85.69 E-value=2.5 Score=39.13 Aligned_cols=94 Identities=18% Similarity=0.294 Sum_probs=53.8
Q ss_pred CHHHHHHHHHhcCCCEEEEecc--CHHH--------HHcCCcEEEEcCCCccCCCCCc--chHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTITKLPILVKGVL--TAED--------VQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~--~~~d--------~~aGad~I~vs~~gg~~~~~~~--~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++++- .++.||++|..+ +.++ ...|.+-+++--.|+.. .... ..+..++.+++.. ..+||+
T Consensus 118 n~~ll~~~a-~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~-~~~~~~~dl~~i~~lk~~~-~~~pV~ 194 (280)
T 2qkf_A 118 QTDLVVAMA-KTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF-GYDNLVVDMLGFGVMKQTC-GNLPVI 194 (280)
T ss_dssp BHHHHHHHH-HTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHHHT-TTCCEE
T ss_pred CHHHHHHHH-cCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHHhC-CCCCEE
Confidence 455677774 579999999764 5665 56787555554444321 1111 2445666666543 147999
Q ss_pred Ee-----------cCCCCH-----HH-HHHHHHhCcCEEEecHHHH
Q 017781 281 LD-----------GGVRRG-----TD-VFKALALGASGIFIGRPVV 309 (366)
Q Consensus 281 ~~-----------GGI~~~-----~d-v~kalalGAd~V~igr~~l 309 (366)
+| ||-..+ .. ...|+++||++++|=+-+-
T Consensus 195 ~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~ 240 (280)
T 2qkf_A 195 FDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPD 240 (280)
T ss_dssp EEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC---
T ss_pred EECCCCccccCccccccCCchhhHHHHHHHHHHcCCCEEEEeecCC
Confidence 96 333334 23 3355679999999998764
No 416
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=85.68 E-value=11 Score=36.52 Aligned_cols=79 Identities=14% Similarity=0.090 Sum_probs=53.5
Q ss_pred HHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHH
Q 017781 215 KDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 290 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~d 290 (366)
+.+.+.++..+++++ =.+.+.++ .+.|+|.+.|... ....+..|.++.+. ..|||.+-|..|-++
T Consensus 104 ~~L~~~~~~~Gi~~~-stpfD~~svd~l~~~~vd~~KIgS~-------~~~N~pLL~~va~~---gKPViLStGmaTl~E 172 (385)
T 1vli_A 104 LPLLDYCREKQVIFL-STVCDEGSADLLQSTSPSAFKIASY-------EINHLPLLKYVARL---NRPMIFSTAGAEISD 172 (385)
T ss_dssp HHHHHHHHHTTCEEE-CBCCSHHHHHHHHTTCCSCEEECGG-------GTTCHHHHHHHHTT---CSCEEEECTTCCHHH
T ss_pred HHHHHHHHHcCCcEE-EccCCHHHHHHHHhcCCCEEEECcc-------cccCHHHHHHHHhc---CCeEEEECCCCCHHH
Confidence 456666666787744 34455554 6789999988431 22356677776642 689999999999999
Q ss_pred HHHHHH----hCcCEEEe
Q 017781 291 VFKALA----LGASGIFI 304 (366)
Q Consensus 291 v~kala----lGAd~V~i 304 (366)
+..|+. .|.+-|.+
T Consensus 173 i~~Ave~i~~~Gn~~iiL 190 (385)
T 1vli_A 173 VHEAWRTIRAEGNNQIAI 190 (385)
T ss_dssp HHHHHHHHHTTTCCCEEE
T ss_pred HHHHHHHHHHCCCCcEEE
Confidence 887775 46644444
No 417
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=85.67 E-value=4.9 Score=37.27 Aligned_cols=83 Identities=24% Similarity=0.246 Sum_probs=53.2
Q ss_pred CHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcC--------CCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSN--------HGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~--------~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
++...+.+.+..+.++++ .....+- .++|+|+|.+-+ .+|. ......+.+.++++.+ ++||+
T Consensus 9 ~~~~~~~~~~~~~~g~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~---~~~~~~~~i~~I~~~~--~iPv~ 82 (305)
T 2nv1_A 9 TERVKRGMAEMQKGGVIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGV---ARMADPTIVEEVMNAV--SIPVM 82 (305)
T ss_dssp CHHHHHHHHHTTTTCEEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCC---CCCCCHHHHHHHHHHC--SSCEE
T ss_pred cHHHHHHHHHHccCCeee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCc---ccCCCHHHHHHHHHhC--CCCEE
Confidence 445555565666777877 4433332 889999994322 1111 0123467788888777 78988
Q ss_pred EecCCCC--HHHHHHHHHhCcCEEE
Q 017781 281 LDGGVRR--GTDVFKALALGASGIF 303 (366)
Q Consensus 281 ~~GGI~~--~~dv~kalalGAd~V~ 303 (366)
+ +++. -.++-.++++|||+|.
T Consensus 83 ~--k~r~g~~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 83 A--KARIGHIVEARVLEAMGVDYID 105 (305)
T ss_dssp E--EECTTCHHHHHHHHHHTCSEEE
T ss_pred e--cccccchHHHHHHHHCCCCEEE
Confidence 5 4555 6677777889999996
No 418
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=85.56 E-value=8.4 Score=36.41 Aligned_cols=86 Identities=12% Similarity=0.178 Sum_probs=57.7
Q ss_pred CCceEEEeeec------CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccc
Q 017781 122 PGIRFFQLYVY------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEA 195 (366)
Q Consensus 122 ~~~~~~Qly~~------~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (366)
.-+.++.|.+. .+.+...+++++++++|++.|.++..... +...
T Consensus 209 ~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~--------------~~~~---------------- 258 (340)
T 3gr7_A 209 DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIV--------------PARM---------------- 258 (340)
T ss_dssp CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSS--------------CCCC----------------
T ss_pred CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcc--------------CCCC----------------
Confidence 34677777642 24566778889999999998877532100 0000
Q ss_pred cchhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEec-cCHHH----HHcC-CcEEEE
Q 017781 196 NDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGV-LTAED----VQAG-AAGIIV 248 (366)
Q Consensus 196 ~~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v-~~~~d----~~aG-ad~I~v 248 (366)
. ..+...++.++++|+.+++||+.-|. .++++ .+.| ||.|.+
T Consensus 259 ----------~-~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 259 ----------N-VYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp ----------C-CCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred ----------C-CCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 0 01234678899999999999998865 46766 7777 999976
No 419
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=85.51 E-value=2.1 Score=39.68 Aligned_cols=69 Identities=28% Similarity=0.329 Sum_probs=49.2
Q ss_pred ccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCH-------------HHHHHHH
Q 017781 233 VLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-------------TDVFKAL 295 (366)
Q Consensus 233 v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~-------------~dv~kal 295 (366)
+.+.++ .++|||.|-+...- ...+--|+...+..+++.+ ++||.+-=--|.+ .|+..+.
T Consensus 46 ~~s~~~a~~A~~gGAdRIELc~~l--~~GGlTPS~g~i~~a~~~~--~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~ 121 (287)
T 3iwp_A 46 VDSVESAVNAERGGADRIELCSGL--SEGGTTPSMGVLQVVKQSV--QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAK 121 (287)
T ss_dssp ESSHHHHHHHHHHTCSEEEECBCG--GGTCBCCCHHHHHHHHTTC--CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHhCCCEEEECCCC--CCCCCCCCHHHHHHHHHhc--CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHH
Confidence 357776 88999999976421 0112235667777777766 6888775444444 7999999
Q ss_pred HhCcCEEEec
Q 017781 296 ALGASGIFIG 305 (366)
Q Consensus 296 alGAd~V~ig 305 (366)
++|||+|.+|
T Consensus 122 ~~GAdGvVfG 131 (287)
T 3iwp_A 122 LYGADGLVFG 131 (287)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEe
Confidence 9999999999
No 420
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=85.45 E-value=6.3 Score=35.53 Aligned_cols=70 Identities=14% Similarity=0.051 Sum_probs=47.5
Q ss_pred HHcCCcEEEEcCCCccCCCCCcc-hHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHH----HHhCcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKA----LALGASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~-~i~vi~~GGI~~~~dv~ka----lalGAd~V~igr~~ 308 (366)
.+.|||.|.+.-.-|.-.++... -.+.+..+++++++ -++||..-|.-+.+.+.++ ..+|||+|=..+-|
T Consensus 105 i~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf 180 (239)
T 3ngj_A 105 VEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGF 180 (239)
T ss_dssp HHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSS
T ss_pred HHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCC
Confidence 67799999965332211111111 33456666666643 3788888888899999988 77899999988765
No 421
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=85.39 E-value=0.89 Score=39.78 Aligned_cols=40 Identities=23% Similarity=0.420 Sum_probs=34.0
Q ss_pred CCHHHHHHHHHhcCCCEEEEec-cCHHH----HHcCCcEEEEcCC
Q 017781 212 LSWKDVKWLQTITKLPILVKGV-LTAED----VQAGAAGIIVSNH 251 (366)
Q Consensus 212 ~~~~~i~~lr~~~~~pv~vK~v-~~~~d----~~aGad~I~vs~~ 251 (366)
...+.++++++.+++||++.|. .+.+| .++|||+|+.|+.
T Consensus 137 i~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 137 IIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp TCHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred hhHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 3457899999999999999975 57777 9999999999874
No 422
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=85.32 E-value=15 Score=34.24 Aligned_cols=101 Identities=19% Similarity=0.142 Sum_probs=67.4
Q ss_pred HHcCCcEEEEcC---CCccCCCCC-cchHHHHHHHHHHcCCCceEEEecCC----------------------CCHHHHH
Q 017781 239 VQAGAAGIIVSN---HGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGV----------------------RRGTDVF 292 (366)
Q Consensus 239 ~~aGad~I~vs~---~gg~~~~~~-~~~~~~l~~i~~~~~~~i~vi~~GGI----------------------~~~~dv~ 292 (366)
.+.|+|.+-++. ||-+...+. .-.++.|.+|.+.. ++|+..=||= ..-+++.
T Consensus 165 ~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~--~~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~ 242 (307)
T 3n9r_A 165 KESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT--NIPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQ 242 (307)
T ss_dssp HHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH--CSCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHH
T ss_pred HHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcC--CCCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHH
Confidence 568999999874 553322222 23678899996665 6999998853 2467888
Q ss_pred HHHHhCcCEEEecHHHHHHhhh-------cC-----H-HHHHHHHHHHHHHHHHHHHHcCCC
Q 017781 293 KALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 341 (366)
Q Consensus 293 kalalGAd~V~igr~~l~~l~~-------~G-----~-~gv~~~~~~l~~el~~~m~~~G~~ 341 (366)
|++.+|..-|-|++-+-++... .. + .-+....+.+++-++..|+.+|+.
T Consensus 243 ~ai~~GV~KiNi~Tdl~~a~~~~vr~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 304 (307)
T 3n9r_A 243 ESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSA 304 (307)
T ss_dssp HHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHcCceEEEechHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999976554211 01 1 122333456677777888888864
No 423
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=85.30 E-value=8.3 Score=33.11 Aligned_cols=83 Identities=18% Similarity=0.158 Sum_probs=48.5
Q ss_pred HHHHHHHHHhc-CCCEEE--EeccC-HHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE-ec
Q 017781 214 WKDVKWLQTIT-KLPILV--KGVLT-AED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL-DG 283 (366)
Q Consensus 214 ~~~i~~lr~~~-~~pv~v--K~v~~-~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~-~G 283 (366)
.+.++++|+.+ +.|+++ | +.+ ++. .++|+|+|+++...+ ...+..+.+..+.. .+++.+ .-
T Consensus 41 ~~~i~~l~~~~~~~~i~~~l~-~~di~~~~~~~a~~~Gad~v~vh~~~~------~~~~~~~~~~~~~~--g~~~gv~~~ 111 (207)
T 3ajx_A 41 LSVITAVKKAHPDKIVFADMK-TMDAGELEADIAFKAGADLVTVLGSAD------DSTIAGAVKAAQAH--NKGVVVDLI 111 (207)
T ss_dssp THHHHHHHHHSTTSEEEEEEE-ECSCHHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHHH--TCEEEEECT
T ss_pred HHHHHHHHHhCCCCeEEEEEE-ecCccHHHHHHHHhCCCCEEEEeccCC------hHHHHHHHHHHHHc--CCceEEEEe
Confidence 35788999987 789886 7 345 433 899999999865432 11222222222222 344422 22
Q ss_pred CCCCHHHHHHHH-HhCcCEEEec
Q 017781 284 GVRRGTDVFKAL-ALGASGIFIG 305 (366)
Q Consensus 284 GI~~~~dv~kal-alGAd~V~ig 305 (366)
...++.+.++.+ .+|+|.|.+.
T Consensus 112 s~~~p~~~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 112 GIEDKATRAQEVRALGAKFVEMH 134 (207)
T ss_dssp TCSSHHHHHHHHHHTTCSEEEEE
T ss_pred cCCChHHHHHHHHHhCCCEEEEE
Confidence 334777755444 5799999554
No 424
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=85.29 E-value=23 Score=32.57 Aligned_cols=33 Identities=30% Similarity=0.378 Sum_probs=25.6
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEec
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 283 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~G 283 (366)
.++|||+|++-+ ++. +...+|.+.+ ++|+|.-|
T Consensus 183 ~eAGA~~ivlE~---------vp~-~~a~~It~~l--~iP~igIG 215 (275)
T 3vav_A 183 EEAGAQLIVLEA---------VPT-LVAAEVTREL--SIPTIGIG 215 (275)
T ss_dssp HHHTCSEEEEES---------CCH-HHHHHHHHHC--SSCEEEES
T ss_pred HHcCCCEEEecC---------CCH-HHHHHHHHhC--CCCEEEEc
Confidence 899999998733 334 3778888888 79999876
No 425
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=85.20 E-value=1.9 Score=40.05 Aligned_cols=91 Identities=21% Similarity=0.280 Sum_probs=55.4
Q ss_pred CHHHHHHHHHhcCCCEEEEecc--CHHH--------HHcCC------cEEEEcCCCccCCCCC--cchHHHHHHHHHHcC
Q 017781 213 SWKDVKWLQTITKLPILVKGVL--TAED--------VQAGA------AGIIVSNHGARQLDYV--PATIMALEEVVKATQ 274 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~--~~~d--------~~aGa------d~I~vs~~gg~~~~~~--~~~~~~l~~i~~~~~ 274 (366)
+.+.++++- .+++||++|..+ +++| .+.|. +-|++--.|- ..... ...+..++.+++ .
T Consensus 120 n~~LLr~~a-~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~-~y~~~~~~vdl~~i~~lk~-~- 195 (288)
T 3tml_A 120 QTDFIHACA-RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGV-SFGYNNLVSDMRSLAIMRE-T- 195 (288)
T ss_dssp CHHHHHHHH-TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCE-ECSSSCEECCHHHHHHGGG-G-
T ss_pred CHHHHHHHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCC-CCCCCcCcCCHHHHHHHHh-c-
Confidence 344566654 468999999764 6655 55665 5555433221 11111 125677777765 5
Q ss_pred CCceEEEe---------------cCCCCHH--HHHHHHHhCcCEEEecHHH
Q 017781 275 GRIPVFLD---------------GGVRRGT--DVFKALALGASGIFIGRPV 308 (366)
Q Consensus 275 ~~i~vi~~---------------GGI~~~~--dv~kalalGAd~V~igr~~ 308 (366)
.+||++| ||-|.-- -...|+++|||+++|=.-+
T Consensus 196 -~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~ 245 (288)
T 3tml_A 196 -NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETHP 245 (288)
T ss_dssp -SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEES
T ss_pred -CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeecc
Confidence 7999996 4544332 3457889999999998754
No 426
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=85.13 E-value=6.2 Score=37.70 Aligned_cols=36 Identities=19% Similarity=0.103 Sum_probs=30.0
Q ss_pred CHHHHHHHHHhcCCCEEEEeccCHHH----HHcC-CcEEEE
Q 017781 213 SWKDVKWLQTITKLPILVKGVLTAED----VQAG-AAGIIV 248 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aG-ad~I~v 248 (366)
.|+.++++|+.+++||+.-+..+.++ .+.| ||+|-+
T Consensus 282 ~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 282 SEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred cHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEE
Confidence 46778999999999999887778876 6666 999976
No 427
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=85.09 E-value=4.3 Score=40.03 Aligned_cols=98 Identities=20% Similarity=0.273 Sum_probs=61.7
Q ss_pred Cc-eEEEeeecCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhH
Q 017781 123 GI-RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLA 201 (366)
Q Consensus 123 ~~-~~~Qly~~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (366)
.| .++.+-+..+.+.+.++++.++++|+++|+++--+. .|. ++ ..+. ... ...++
T Consensus 297 ~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~---~~~-d~------------~~~~-----~~~-GGlSG-- 352 (443)
T 1tv5_A 297 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT---QIN-DI------------KSFE-----NKK-GGVSG-- 352 (443)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBS---CCC-CC------------GGGT-----TCC-SEEEE--
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCc---ccc-cc------------cccc-----ccc-CCcCC--
Confidence 36 688887666666778889999999999998863321 010 00 0000 000 00000
Q ss_pred HHhhhccCCCCCHHHHHHHHHhc--CCCEEEEe-ccCHHH----HHcCCcEEEEc
Q 017781 202 AYVAGQIDRSLSWKDVKWLQTIT--KLPILVKG-VLTAED----VQAGAAGIIVS 249 (366)
Q Consensus 202 ~~~~~~~d~~~~~~~i~~lr~~~--~~pv~vK~-v~~~~d----~~aGad~I~vs 249 (366)
.. ..+.+++.++++++.+ ++|||.=| +.+.+| ..+|||+|.+.
T Consensus 353 ~~-----~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 353 AK-----LKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQLY 402 (443)
T ss_dssp HH-----HHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEES
T ss_pred Cc-----chHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 00 0123578899999998 89988764 578888 88999999874
No 428
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=84.99 E-value=11 Score=35.80 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=79.8
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
..+.+...++++.|+++|++++=...= ..+.+..... + .+...+ .+...-++... ..
T Consensus 31 ~gs~e~a~~li~~ak~aGadavKfq~~------k~~tl~s~~~-------~---~fq~~~----~~~~~y~~~~~---~~ 87 (349)
T 2wqp_A 31 EGSLKTAFEMVDAAYNAGAEVVKHQTH------IVEDEMSDEA-------K---QVIPGN----ADVSIYEIMER---CA 87 (349)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEEEC------CHHHHCCGGG-------G---GCCCTT----CSSCHHHHHHH---HC
T ss_pred cCCHHHHHHHHHHHHHhCCCEEeeeec------ccccccCcch-------h---ccccCC----CCccHHHHHHH---hC
Confidence 458899999999999999998754221 1111100000 0 000000 00000011111 13
Q ss_pred CCHHH---HHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecC
Q 017781 212 LSWKD---VKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 284 (366)
Q Consensus 212 ~~~~~---i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GG 284 (366)
+.|+. +.+.++..+++++ =.+.+.++ .+.|+|.+.+... ....+..|.++.+. ..|||.+-|
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~-st~~d~~svd~l~~~~v~~~KI~S~-------~~~n~~LL~~va~~---gkPviLstG 156 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFI-STLFSRAAALRLQRMDIPAYKIGSG-------ECNNYPLIKLVASF---GKPIILSTG 156 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEE-EEECSHHHHHHHHHHTCSCEEECGG-------GTTCHHHHHHHHTT---CSCEEEECT
T ss_pred CCHHHHHHHHHHHHHhCCeEE-EeeCCHHHHHHHHhcCCCEEEECcc-------cccCHHHHHHHHhc---CCeEEEECC
Confidence 45554 4455555677754 44556655 7889999988431 22356677777642 689999999
Q ss_pred CCCHHHHHHHHH----hCcCEEEe
Q 017781 285 VRRGTDVFKALA----LGASGIFI 304 (366)
Q Consensus 285 I~~~~dv~kala----lGAd~V~i 304 (366)
..|-+++..|+. .|.+.+.+
T Consensus 157 mat~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 157 MNSIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp TCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE
Confidence 999999887764 46655544
No 429
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=84.85 E-value=2.6 Score=39.12 Aligned_cols=107 Identities=17% Similarity=0.073 Sum_probs=61.4
Q ss_pred CCceEEEeeecCCHHHHHHHHHHHHHcC-CCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhh
Q 017781 122 PGIRFFQLYVYKDRNVVAQLVRRAERAG-FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGL 200 (366)
Q Consensus 122 ~~~~~~Qly~~~d~~~~~~~l~ra~~~G-~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 200 (366)
..|.++.+....+.+.+.+++++++++| ++++.++-- ...+.. -|..... | .... ..... +.
T Consensus 160 ~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~-~~~~~~-i~~~~~~--~---~~~~--------~~~~g--G~ 222 (314)
T 2e6f_A 160 GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNS-VGNGLV-IDAESES--V---VIKP--------KQGFG--GL 222 (314)
T ss_dssp CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCC-EEEEEC-EETTTTE--E---SCCG--------GGGEE--EE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCC-CCcccc-ccCCCCC--c---cccc--------CcCCC--cc
Confidence 3578888876667777788889999999 999876421 100000 0000000 0 0000 00000 00
Q ss_pred HHHhhhccCCCCCHHHHHHHHHhc-CCCEEEEe-ccCHHH----HHcCCcEEEEc
Q 017781 201 AAYVAGQIDRSLSWKDVKWLQTIT-KLPILVKG-VLTAED----VQAGAAGIIVS 249 (366)
Q Consensus 201 ~~~~~~~~d~~~~~~~i~~lr~~~-~~pv~vK~-v~~~~d----~~aGad~I~vs 249 (366)
......+..|+.++++++.+ ++||+.=| +.+.+| ..+|||+|.+.
T Consensus 223 ----sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 223 ----GGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp ----ESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred ----CcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 00001123578899999998 89988775 467887 78899999874
No 430
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=84.81 E-value=6.1 Score=37.66 Aligned_cols=53 Identities=8% Similarity=0.044 Sum_probs=39.6
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEe
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 304 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~i 304 (366)
.+.|+|.|.++. | .+..+.+..+++. .++|+. .+.+.+++.++...|+|+|.+
T Consensus 119 ~~~g~~~V~~~~--g------~~~~~~i~~~~~~---g~~v~~--~v~t~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 119 LDDPVPVVSFHF--G------VPDREVIARLRRA---GTLTLV--TATTPEEARAVEAAGADAVIA 171 (369)
T ss_dssp HHSCCSEEEEES--S------CCCHHHHHHHHHT---TCEEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred HhcCCCEEEEeC--C------CCcHHHHHHHHHC---CCeEEE--ECCCHHHHHHHHHcCCCEEEE
Confidence 889999998743 2 1335566666542 567776 478999999999999999998
No 431
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=84.69 E-value=26 Score=32.84 Aligned_cols=178 Identities=13% Similarity=0.018 Sum_probs=93.0
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHHH
Q 017781 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNVV 138 (366)
Q Consensus 73 Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~~ 138 (366)
|.++.|+.-.+-...++-..+++-.-+.|+...+ + +..+.+.+|-.+ . .. .|.+...- ..+.+..
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG-ALRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 4445565322222222334666666677875543 3 334566665432 1 22 35666654 3455667
Q ss_pred HHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHHH
Q 017781 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVK 218 (366)
Q Consensus 139 ~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~ 218 (366)
.++.+.|+++|++++.+. +|.. ++ | ...-..+..+
T Consensus 119 i~la~~A~~~Gadavlv~--~P~Y-~~----------~--------------------------------s~~~l~~~f~ 153 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLA--PVSY-TP----------L--------------------------------TQEEAYHHFA 153 (332)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCCS-SC----------C--------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-CC----------C--------------------------------CHHHHHHHHH
Confidence 788899999999998873 2321 00 0 0000123345
Q ss_pred HHHHhcCCCEEEEec-------cCHHH----HHc-CCcEEEEcCCCccCCCCCc-chHHHHHHHHHHcCCCceEEEecCC
Q 017781 219 WLQTITKLPILVKGV-------LTAED----VQA-GAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGV 285 (366)
Q Consensus 219 ~lr~~~~~pv~vK~v-------~~~~d----~~a-Gad~I~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~i~vi~~GGI 285 (366)
.+-+.+++||++=.+ ++++. .+. .+-+|.-+. | .. ..+..+.++++..++++.|+ +|
T Consensus 154 ~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvgiKdss--g-----d~~~~~~~~~~l~~~~~~~f~v~-~G-- 223 (332)
T 2r8w_A 154 AVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIKMPL--P-----ADADYAGELARLRPKLSDDFAIG-YS-- 223 (332)
T ss_dssp HHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEEEEECC--C-----TTCCHHHHHHHHTTTSCTTCEEE-EC--
T ss_pred HHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEEeCC--C-----CchhHHHHHHHHHHhcCCCEEEE-eC--
Confidence 555667788887654 23443 211 122222211 1 00 01455555555444445444 45
Q ss_pred CCHHHHHHHHHhCcCEEEecHH
Q 017781 286 RRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 286 ~~~~dv~kalalGAd~V~igr~ 307 (366)
+..-++.++++||+++.-+..
T Consensus 224 -~D~~~l~~l~~G~~G~is~~a 244 (332)
T 2r8w_A 224 -GDWGCTDATLAGGDTWYSVVA 244 (332)
T ss_dssp -CHHHHHHHHHTTCSEEEESGG
T ss_pred -chHHHHHHHHCCCCEEEeCHH
Confidence 355678899999999998864
No 432
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=84.33 E-value=8.9 Score=36.71 Aligned_cols=84 Identities=14% Similarity=0.089 Sum_probs=57.6
Q ss_pred HHHHHHHHHhcC--CCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEE
Q 017781 214 WKDVKWLQTITK--LPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 281 (366)
Q Consensus 214 ~~~i~~lr~~~~--~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~ 281 (366)
.+.++.+|+.++ .++.+..- .+.++ .+.|+.+|- +. ..+..++.+.++++.. .+||.+
T Consensus 180 ~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~--~ipIa~ 249 (381)
T 3fcp_A 180 LRHTRAIVEALGDRASIRVDVNQAWDAATGAKGCRELAAMGVDLIE-------QP-VSAHDNAALVRLSQQI--ETAILA 249 (381)
T ss_dssp HHHHHHHHHHTCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCSEEE-------CC-BCTTCHHHHHHHHHHS--SSEEEE
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHhhcCcccee-------CC-CCcccHHHHHHHHHhC--CCCEEE
Confidence 445666776652 45555532 23333 455666663 11 1233578888888877 799999
Q ss_pred ecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 282 DGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 282 ~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
+--+.+..|+.+++..| +|.|++--.
T Consensus 250 dE~~~~~~~~~~~~~~~a~d~v~~k~~ 276 (381)
T 3fcp_A 250 DEAVATAYDGYQLAQQGFTGAYALKIA 276 (381)
T ss_dssp STTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 99999999999999986 899998643
No 433
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=83.62 E-value=3.3 Score=38.51 Aligned_cols=93 Identities=24% Similarity=0.334 Sum_probs=55.2
Q ss_pred CHHHHHHHHHhcCCCEEEEecc--CHHH--------HHcCCcEEEEcCCCccCCCCCc--chHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTITKLPILVKGVL--TAED--------VQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~--~~~d--------~~aGad~I~vs~~gg~~~~~~~--~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++++- .+++||++|..+ ++++ ...|.+-+++--.|+.. .... ..+..++.+++.. ..+||+
T Consensus 121 n~~Ll~~~a-~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~-~y~~~~~dl~~i~~lk~~~-~~~pV~ 197 (292)
T 1o60_A 121 QTDLVEAMA-KTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTNF-GYDNLIVDMLGFSVMKKAS-KGSPVI 197 (292)
T ss_dssp CHHHHHHHH-HTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHHHT-TSCCEE
T ss_pred CHHHHHHHH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHhhC-CCCCEE
Confidence 455677776 469999999764 5665 66787555554444321 1111 2445566665543 147999
Q ss_pred Eec-----------CCCCH-----HHHH-HHHHhCcCEEEecHHH
Q 017781 281 LDG-----------GVRRG-----TDVF-KALALGASGIFIGRPV 308 (366)
Q Consensus 281 ~~G-----------GI~~~-----~dv~-kalalGAd~V~igr~~ 308 (366)
+|. +-..+ ..+. .|+++||++++|=+-|
T Consensus 198 ~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~ 242 (292)
T 1o60_A 198 FDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLFLEAHP 242 (292)
T ss_dssp EEHHHHCC------------CTTHHHHHHHHHHHCCSEEEEEEES
T ss_pred EECCCcccccCccccCCCCChhHHHHHHHHHHHcCCCEEEEEecC
Confidence 942 22233 2343 6678999999999865
No 434
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=83.57 E-value=2.9 Score=38.53 Aligned_cols=73 Identities=22% Similarity=0.271 Sum_probs=49.7
Q ss_pred cCCCEEEEeccCHHH----HHcCCcEEEEcC--------CCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHH
Q 017781 224 TKLPILVKGVLTAED----VQAGAAGIIVSN--------HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 291 (366)
Q Consensus 224 ~~~pv~vK~v~~~~d----~~aGad~I~vs~--------~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv 291 (366)
.+.|+++ .+...+- .++|+++|.+.. .+|.. .....+.+.++++.+ ++|+++..++.+.+++
T Consensus 20 ~~~~~i~-~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~---~~~~~~~i~~i~~~~--~~Pvi~~~~~~~~~~~ 93 (297)
T 2zbt_A 20 FKGGVIM-DVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVA---RMSDPKIIKEIMAAV--SIPVMAKVRIGHFVEA 93 (297)
T ss_dssp GTTEEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCC---CCCCHHHHHHHHTTC--SSCEEEEEETTCHHHH
T ss_pred hhCCeee-eechHHHHHHHHHCCCcEEEeccccchHHHhhcCCc---cCCCHHHHHHHHHhc--CCCeEEEeccCCHHHH
Confidence 3556665 3333332 889999997621 11111 122456777777665 7899998888888889
Q ss_pred HHHHHhCcCEE
Q 017781 292 FKALALGASGI 302 (366)
Q Consensus 292 ~kalalGAd~V 302 (366)
-.++++|||+|
T Consensus 94 ~~~~~aGad~v 104 (297)
T 2zbt_A 94 MILEAIGVDFI 104 (297)
T ss_dssp HHHHHTTCSEE
T ss_pred HHHHHCCCCEE
Confidence 99999999999
No 435
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=83.43 E-value=10 Score=36.51 Aligned_cols=45 Identities=16% Similarity=0.223 Sum_probs=37.8
Q ss_pred chHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 261 ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 261 ~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
..++.+.++++.. .+||.++--+.+..|+.+++..| +|.|++--.
T Consensus 245 ~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~ 290 (391)
T 4e8g_A 245 NTLEEIAAIRGRV--QHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLT 290 (391)
T ss_dssp SSHHHHHHHGGGC--CSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHH
T ss_pred ccHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcc
Confidence 3567777777766 79999999999999999999987 799998643
No 436
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=83.34 E-value=8.1 Score=34.77 Aligned_cols=40 Identities=23% Similarity=0.294 Sum_probs=31.7
Q ss_pred CCCHHHHHHHHHh--cCCCEEEEeccCHHH----HHcCCcEEEEcC
Q 017781 211 SLSWKDVKWLQTI--TKLPILVKGVLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 211 ~~~~~~i~~lr~~--~~~pv~vK~v~~~~d----~~aGad~I~vs~ 250 (366)
...++.++++++. .++|++.-|..+.++ .++|+|+|.|..
T Consensus 175 ~~gl~~l~~~~~~~~~~iPvvAiGGI~~~ni~~~~~aGa~gvav~s 220 (243)
T 3o63_A 175 APGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVR 220 (243)
T ss_dssp CCCHHHHHHHHTC---CCCEEEESSCCTTTHHHHHHTTCCCEEESH
T ss_pred hhhHHHHHHHHHhccCCCCEEEecCCCHHHHHHHHHcCCCEEEEeH
Confidence 3578889999886 489999887767665 899999998743
No 437
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=83.21 E-value=7.3 Score=36.74 Aligned_cols=80 Identities=18% Similarity=0.163 Sum_probs=53.3
Q ss_pred cCCCEEEEec--cCHHH-----HHcCCcEEEEcCCCccC---CCCCc---chHHHHHHHHHHcCCCceEEEe--cCCCCH
Q 017781 224 TKLPILVKGV--LTAED-----VQAGAAGIIVSNHGARQ---LDYVP---ATIMALEEVVKATQGRIPVFLD--GGVRRG 288 (366)
Q Consensus 224 ~~~pv~vK~v--~~~~d-----~~aGad~I~vs~~gg~~---~~~~~---~~~~~l~~i~~~~~~~i~vi~~--GGI~~~ 288 (366)
.+.|+++... .+.++ .++|+|+|.+......+ ..+.+ ..++.+.++++.+ ++||++- |...+.
T Consensus 115 ~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~~~ 192 (349)
T 1p0k_A 115 PNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGMSK 192 (349)
T ss_dssp SSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCCCH
T ss_pred CCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCCCH
Confidence 4788887654 34544 67899999775321110 00111 1457788888777 7898885 444689
Q ss_pred HHHHHHHHhCcCEEEec
Q 017781 289 TDVFKALALGASGIFIG 305 (366)
Q Consensus 289 ~dv~kalalGAd~V~ig 305 (366)
+++.++..+|||+|.+.
T Consensus 193 ~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 99999999999999994
No 438
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=83.00 E-value=9 Score=36.79 Aligned_cols=120 Identities=16% Similarity=0.138 Sum_probs=76.3
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (366)
..+++.+.+.++++.+.|++++=+.++++... .++.
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~--------------------------------------------~~~~ 178 (386)
T 3fv9_G 143 GDTPEAMRAKVARHRAQGFKGHSIKIGASEAE--------------------------------------------GGPA 178 (386)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCCTTT--------------------------------------------THHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeccCCCCC--------------------------------------------CCHH
Confidence 35777777788888889999998877643100 0011
Q ss_pred CCHHHHHHHHHhc--CCCEEEEec--cCHHH-----HH--cCCc-EEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceE
Q 017781 212 LSWKDVKWLQTIT--KLPILVKGV--LTAED-----VQ--AGAA-GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 279 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK~v--~~~~d-----~~--aGad-~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~v 279 (366)
.+.+.++.+|+.+ +.++.+..- .+.++ .. .+.+ +|- + -.+.++.+.++++.. .+||
T Consensus 179 ~d~~~v~avR~a~G~~~~L~vDaN~~~~~~~A~~~~~~l~~~~~i~iE-------e---P~~~~~~~~~l~~~~--~iPI 246 (386)
T 3fv9_G 179 LDAERITACLADRQPGEWYLADANNGLTVEHALRMLSLLPPGLDIVLE-------A---PCASWAETKSLRARC--ALPL 246 (386)
T ss_dssp HHHHHHHHHTTTCCTTCEEEEECTTCCCHHHHHHHHHHSCSSCCCEEE-------C---CCSSHHHHHHHHTTC--CSCE
T ss_pred HHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHhhccCCcEEe-------c---CCCCHHHHHHHHhhC--CCCE
Confidence 2334566666665 355666532 34433 11 1112 221 1 112567777777666 7999
Q ss_pred EEecCCCCHHHHHHHHHhC-cCEEEecHH
Q 017781 280 FLDGGVRRGTDVFKALALG-ASGIFIGRP 307 (366)
Q Consensus 280 i~~GGI~~~~dv~kalalG-Ad~V~igr~ 307 (366)
.++.-+.+..|+.+++..| +|.|++--.
T Consensus 247 a~dE~~~~~~~~~~~~~~~a~d~v~~k~~ 275 (386)
T 3fv9_G 247 LLDELIQTETDLIAAIRDDLCDGVGLKVS 275 (386)
T ss_dssp EESTTCCSHHHHHHHHHTTCCSEEEEEHH
T ss_pred EeCCCcCCHHHHHHHHHhCCCCEEEECcc
Confidence 9999999999999999987 899998643
No 439
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=82.77 E-value=6.1 Score=37.77 Aligned_cols=36 Identities=19% Similarity=0.121 Sum_probs=29.9
Q ss_pred CHHHHHHHHHhcCCCEEEEeccCHHH----HHcC-CcEEEE
Q 017781 213 SWKDVKWLQTITKLPILVKGVLTAED----VQAG-AAGIIV 248 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aG-ad~I~v 248 (366)
.|+.++++|+.+++||+.-|..++++ .+.| ||+|-+
T Consensus 281 ~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 281 PVSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp CHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEC
T ss_pred cHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehh
Confidence 46778999999999999887668876 7777 999965
No 440
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=82.76 E-value=9.1 Score=33.46 Aligned_cols=83 Identities=20% Similarity=0.037 Sum_probs=52.6
Q ss_pred HHHHHHHHHhc-CCCE--EEEeccCHHH-----HHcCCcEEEEcCCCccCCCCCcchH-HHHHHHHHHcCCCceEEE-ec
Q 017781 214 WKDVKWLQTIT-KLPI--LVKGVLTAED-----VQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRIPVFL-DG 283 (366)
Q Consensus 214 ~~~i~~lr~~~-~~pv--~vK~v~~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~i~vi~-~G 283 (366)
.+.|+++|+.. +.|+ -+|....++. .++|+|+|+++..++ ...+ +.+..+++ . .+..++ .=
T Consensus 47 ~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~------~~~~~~~~~~~~~-~--g~~~~~d~l 117 (218)
T 3jr2_A 47 MKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAH------IATIAACKKVADE-L--NGEIQIEIY 117 (218)
T ss_dssp THHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSC------HHHHHHHHHHHHH-H--TCEEEEECC
T ss_pred HHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCC------HHHHHHHHHHHHH-h--CCccceeee
Confidence 46789999884 5555 4565544333 899999999976432 1222 23333333 2 455554 33
Q ss_pred CCCCHHHHHHHHHhCcCEEEec
Q 017781 284 GVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 284 GI~~~~dv~kalalGAd~V~ig 305 (366)
|+.|.+++..+..+|+|.+.+.
T Consensus 118 ~~~T~~~~~~~~~~g~d~v~~~ 139 (218)
T 3jr2_A 118 GNWTMQDAKAWVDLGITQAIYH 139 (218)
T ss_dssp SSCCHHHHHHHHHTTCCEEEEE
T ss_pred ecCCHHHHHHHHHcCccceeee
Confidence 5678888998888999987653
No 441
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=82.69 E-value=2.4 Score=38.93 Aligned_cols=90 Identities=22% Similarity=0.217 Sum_probs=53.3
Q ss_pred CHHHHHHHHHhcCCCEEEEecc--CHHH--------HHcCCcEEEEcCCCccCCCCCc--chHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTITKLPILVKGVL--TAED--------VQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~--~~~d--------~~aGad~I~vs~~gg~~~~~~~--~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++++. .++.||++|..+ ++++ ...|-.-+++--.|+.. .... ..+..++.+++. . ||+
T Consensus 107 n~~ll~~~a-~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~~~-~y~~~~~dl~~i~~lk~~---~-pVi 180 (267)
T 2nwr_A 107 QTDLLLAAA-KTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTTF-GYNNLVVDFRSLPIMKQW---A-KVI 180 (267)
T ss_dssp CHHHHHHHH-TTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEEC-SSSCEECCTTHHHHHTTT---S-EEE
T ss_pred CHHHHHHHH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHHc---C-CEE
Confidence 455677774 579999999764 6665 56786545544444421 1111 234455555442 3 999
Q ss_pred Ee---------------cCCCCH-HH-HHHHHHhCcCEEEecHHH
Q 017781 281 LD---------------GGVRRG-TD-VFKALALGASGIFIGRPV 308 (366)
Q Consensus 281 ~~---------------GGI~~~-~d-v~kalalGAd~V~igr~~ 308 (366)
+| +|-+.- .+ +..++++||++++|=+-+
T Consensus 181 vD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mIE~H~ 225 (267)
T 2nwr_A 181 YDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHP 225 (267)
T ss_dssp EETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred EcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEEEecC
Confidence 97 443221 23 335678999999998754
No 442
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=82.67 E-value=1.6 Score=40.08 Aligned_cols=38 Identities=11% Similarity=0.247 Sum_probs=31.1
Q ss_pred CHHHHHHHHH-hcC-CCEEEEe-ccCHHH----HHcCCcEEEEcC
Q 017781 213 SWKDVKWLQT-ITK-LPILVKG-VLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 213 ~~~~i~~lr~-~~~-~pv~vK~-v~~~~d----~~aGad~I~vs~ 250 (366)
+.+.++.+++ ..+ +||++-+ +.+++| .+.|+|+|.|..
T Consensus 164 ~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 164 TRALLELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp THHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred CHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 4667899998 667 9999985 578888 999999998843
No 443
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=82.52 E-value=13 Score=35.13 Aligned_cols=85 Identities=18% Similarity=0.185 Sum_probs=56.3
Q ss_pred ceEEEeee------cCCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccc
Q 017781 124 IRFFQLYV------YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAND 197 (366)
Q Consensus 124 ~~~~Qly~------~~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 197 (366)
+.++.|.. ..+.+...+++++++++|++.|.++...... ....|
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~---------~~~~~--------------------- 270 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVL---------RVRIP--------------------- 270 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCS---------SSCCC---------------------
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCc---------ccccC---------------------
Confidence 56676654 2355667788888999999988776421000 00000
Q ss_pred hhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEec-cCHHH----HHcC-CcEEEE
Q 017781 198 SGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGV-LTAED----VQAG-AAGIIV 248 (366)
Q Consensus 198 ~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v-~~~~d----~~aG-ad~I~v 248 (366)
..+...++.++++|+.+++||+.-|. .++++ .+.| +|.|.+
T Consensus 271 ----------~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 271 ----------LAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLL 317 (349)
T ss_dssp ----------CCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEE
T ss_pred ----------CCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEe
Confidence 01234678899999999999988765 46776 7778 999976
No 444
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=82.11 E-value=5.4 Score=36.33 Aligned_cols=65 Identities=26% Similarity=0.368 Sum_probs=48.2
Q ss_pred cCHHH----HHcCCcEEEEcCC---CccCCCCCcchHHHHHHHHHHcCCCceEEE-----ecCCCCH--------HHHHH
Q 017781 234 LTAED----VQAGAAGIIVSNH---GARQLDYVPATIMALEEVVKATQGRIPVFL-----DGGVRRG--------TDVFK 293 (366)
Q Consensus 234 ~~~~d----~~aGad~I~vs~~---gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~-----~GGI~~~--------~dv~k 293 (366)
.+.++ .+.|||-|-+... || --|++..+..+++.+ ++||.+ .|++... .|+..
T Consensus 9 ~s~~~a~~A~~~GAdRIELc~~L~~GG-----lTPS~g~i~~~~~~~--~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~ 81 (256)
T 1twd_A 9 YSMECALTAQQNGADRVELCAAPKEGG-----LTPSLGVLKSVRQRV--TIPVHPIIRPRGGDFCYSDGEFAAILEDVRT 81 (256)
T ss_dssp SSHHHHHHHHHTTCSEEEECBCGGGTC-----BCCCHHHHHHHHHHC--CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCcccCC-----CCCCHHHHHHHHHHc--CCceEEEECCCCCCCcCCHHHHHHHHHHHHH
Confidence 56776 8999999997653 33 235677777888877 788876 3455444 47777
Q ss_pred HHHhCcCEEEec
Q 017781 294 ALALGASGIFIG 305 (366)
Q Consensus 294 alalGAd~V~ig 305 (366)
+..+|||+|.+|
T Consensus 82 ~~~~GadGvV~G 93 (256)
T 1twd_A 82 VRELGFPGLVTG 93 (256)
T ss_dssp HHHTTCSEEEEC
T ss_pred HHHcCCCEEEEe
Confidence 888999999999
No 445
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=81.68 E-value=6.6 Score=36.39 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=45.6
Q ss_pred HHcCCcEEEEcCCCccCCCCC-cchHHHHHHHHHHcCCC-ceEEEecCCCCHHHHHHH----HHhCcCEEEecHHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGR-IPVFLDGGVRRGTDVFKA----LALGASGIFIGRPV 308 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~~-i~vi~~GGI~~~~dv~ka----lalGAd~V~igr~~ 308 (366)
.+.|||-|.+.-.-|.-.++. ..-.+.+..+++++++. +.||..-|.-+.+++.++ ..+|||+|--.+-|
T Consensus 136 i~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf 211 (288)
T 3oa3_A 136 MQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGF 211 (288)
T ss_dssp HHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSS
T ss_pred HHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 678999999653322111111 12345566777776543 788999888888886654 34799999887644
No 446
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=81.34 E-value=10 Score=36.08 Aligned_cols=85 Identities=16% Similarity=0.130 Sum_probs=55.3
Q ss_pred ceEEEeeec-------CCHHHHHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCcccc
Q 017781 124 IRFFQLYVY-------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN 196 (366)
Q Consensus 124 ~~~~Qly~~-------~d~~~~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 196 (366)
+.++.|... .+.+...+++++++++|++.|.++....... ...|
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~---------~~~~-------------------- 277 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPD---------TNIP-------------------- 277 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSC---------CCCC--------------------
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccc---------cccC--------------------
Confidence 566766542 2345566778888999999988764321000 0000
Q ss_pred chhhHHHhhhccCCCCCHHHHHHHHHhcCCCEEEEecc-CHHH----HHcC-CcEEEE
Q 017781 197 DSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVL-TAED----VQAG-AAGIIV 248 (366)
Q Consensus 197 ~~~~~~~~~~~~d~~~~~~~i~~lr~~~~~pv~vK~v~-~~~d----~~aG-ad~I~v 248 (366)
..+...++.++++|+.+++||+.-|.. ++++ .+.| +|.|.+
T Consensus 278 -----------~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 278 -----------WGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp -----------CCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEEC
T ss_pred -----------CCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEe
Confidence 012346778899999999999888754 6766 6777 999965
No 447
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=81.22 E-value=7.7 Score=34.50 Aligned_cols=37 Identities=32% Similarity=0.461 Sum_probs=29.1
Q ss_pred CHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEc
Q 017781 213 SWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVS 249 (366)
Q Consensus 213 ~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs 249 (366)
.++.++++|+.. +.|+.|-|..+++. .++|||.+++.
T Consensus 156 ~l~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvG 197 (228)
T 3ovp_A 156 MMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSG 197 (228)
T ss_dssp GHHHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEe
Confidence 466789999876 57888887766554 89999999874
No 448
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=81.15 E-value=34 Score=31.58 Aligned_cols=83 Identities=14% Similarity=0.072 Sum_probs=50.2
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCcee--cC---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LS---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~--vs---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
.|.++.|+. .+-...++-..+++-.-+.|+... ++ +..+.+.+|-.+ . .+ .|.+...- ..+.+.
T Consensus 18 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ 95 (306)
T 1o5k_A 18 GTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEK 95 (306)
T ss_dssp EEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred eeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHH
Confidence 344556664 433333444567777777887554 23 344567665432 1 22 35566654 345666
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q 017781 138 VAQLVRRAERAGFKAIALT 156 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vt 156 (366)
..++.+.|+++|++++.+.
T Consensus 96 ai~la~~A~~~Gadavlv~ 114 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVV 114 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEC
Confidence 7788899999999998874
No 449
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=80.94 E-value=16 Score=35.75 Aligned_cols=45 Identities=13% Similarity=-0.016 Sum_probs=36.2
Q ss_pred chHHHHHHHHHHcC-CCceEEEecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 261 ATIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 261 ~~~~~l~~i~~~~~-~~i~vi~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
..++.+.++++.+. ..+||.++--+.+..|+.+++..| +|.|++-
T Consensus 283 ~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d 329 (441)
T 4a35_A 283 DDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQID 329 (441)
T ss_dssp TCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred ccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEEC
Confidence 35677788887621 179999999999999999999987 7888875
No 450
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=80.92 E-value=33 Score=31.34 Aligned_cols=83 Identities=10% Similarity=-0.037 Sum_probs=51.7
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
.|.++.|+.-.+ ...++-..+++-.-+.|+...+ + +..+.+.+|-.+ . .. .|.+...- ..+.+.
T Consensus 7 ~~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~ 84 (291)
T 3a5f_A 7 GVAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAA 84 (291)
T ss_dssp EEECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred eeeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHH
Confidence 345567774334 4455555777777778876543 3 344566665432 1 22 35666654 345566
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q 017781 138 VAQLVRRAERAGFKAIALT 156 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vt 156 (366)
..++.+.++++|++++.+.
T Consensus 85 ai~la~~a~~~Gadavlv~ 103 (291)
T 3a5f_A 85 SIAMSKWAESIGVDGLLVI 103 (291)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEc
Confidence 7788899999999998874
No 451
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=80.89 E-value=12 Score=34.78 Aligned_cols=87 Identities=20% Similarity=0.282 Sum_probs=55.4
Q ss_pred HHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCC-c-c---CCCCCcchHH----HHHHHHHHcCCCceEEEe
Q 017781 216 DVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHG-A-R---QLDYVPATIM----ALEEVVKATQGRIPVFLD 282 (366)
Q Consensus 216 ~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~g-g-~---~~~~~~~~~~----~l~~i~~~~~~~i~vi~~ 282 (366)
.++.+++. +.|+++=++.+.-. .++|+|+|.+++.+ + . ..|.++-+++ .+..|.+.. ++||++|
T Consensus 13 ~lr~l~~~-~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~--~~PviaD 89 (298)
T 3eoo_A 13 KFRAAVAA-EQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT--NLPLLVD 89 (298)
T ss_dssp HHHHHHHH-SSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC--CSCEEEE
T ss_pred HHHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc--CCeEEEE
Confidence 35555543 56888878766654 88999999998722 1 0 2344554443 344455555 7999998
Q ss_pred c--CCCCHHHHH----HHHHhCcCEEEec
Q 017781 283 G--GVRRGTDVF----KALALGASGIFIG 305 (366)
Q Consensus 283 G--GI~~~~dv~----kalalGAd~V~ig 305 (366)
. |..++.++. +.+..||.+|.|-
T Consensus 90 ~d~Gyg~~~~v~~~v~~l~~aGaagv~iE 118 (298)
T 3eoo_A 90 IDTGWGGAFNIARTIRSFIKAGVGAVHLE 118 (298)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCeEEEEC
Confidence 7 444555554 3345899999764
No 452
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=80.80 E-value=3.3 Score=40.14 Aligned_cols=83 Identities=10% Similarity=0.019 Sum_probs=62.3
Q ss_pred CHHHHHHHHHhc--CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTIT--KLPILVKGV--LTAED--------VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi 280 (366)
+.+.++.+|+.+ +.+|.+-.- .+.++ .+.|+++|-- ...+..++.+.++++.. .+||+
T Consensus 196 d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPIa 265 (400)
T 4dxk_A 196 ALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTFWHED--------PIKMDSLSSLTRYAAVS--PAPIS 265 (400)
T ss_dssp HHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCSEEEC--------CBCTTSGGGHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCCEEEc--------CCCcccHHHHHHHHHhC--CCCEE
Confidence 466789999987 478888743 45555 5678887751 01122455677788777 79999
Q ss_pred EecCCCCHHHHHHHHHhC-cCEEEec
Q 017781 281 LDGGVRRGTDVFKALALG-ASGIFIG 305 (366)
Q Consensus 281 ~~GGI~~~~dv~kalalG-Ad~V~ig 305 (366)
++..+.+..|+.+++..| +|.|++-
T Consensus 266 ~dE~~~~~~~~~~~l~~~a~d~v~~d 291 (400)
T 4dxk_A 266 ASETLGSRWAFRDLLETGAAGVVMLD 291 (400)
T ss_dssp ECTTCCHHHHHHHHHHTTCCCEEEEC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999999998 7999985
No 453
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=80.40 E-value=4.3 Score=37.00 Aligned_cols=62 Identities=16% Similarity=0.351 Sum_probs=47.4
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 306 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr 306 (366)
.++||++|.|-.-.- +-..+.+.|..+++.+ ++||+--==|-++.++.+|-++|||+|.+=-
T Consensus 73 ~~~GA~aiSVLTd~~----~F~Gs~~~L~~vr~~v--~lPvLrKDFiid~yQI~eAr~~GADaILLI~ 134 (258)
T 4a29_A 73 MERYAVGLSITTEEK----YFNGSYETLRKIASSV--SIPILMSDFIVKESQIDDAYNLGADTVLLIV 134 (258)
T ss_dssp HTTTCSEEEEECCST----TTCCCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHHHTCSEEEEEG
T ss_pred HhCCCeEEEEeCCCC----CCCCCHHHHHHHHHhc--CCCEeeccccccHHHHHHHHHcCCCeeehHH
Confidence 678999998754210 1113567788888777 8999887778999999999999999997643
No 454
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=80.09 E-value=7.4 Score=34.68 Aligned_cols=38 Identities=29% Similarity=0.298 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHhc-CCCEEEEeccCHHH----HHcCCcEEEEc
Q 017781 212 LSWKDVKWLQTIT-KLPILVKGVLTAED----VQAGAAGIIVS 249 (366)
Q Consensus 212 ~~~~~i~~lr~~~-~~pv~vK~v~~~~d----~~aGad~I~vs 249 (366)
..++.|+++|+.. +.+|.|=|..+.++ .++|||.+++.
T Consensus 159 ~~l~ki~~lr~~~~~~~I~VdGGI~~~ti~~~~~aGAd~~V~G 201 (227)
T 1tqx_A 159 DMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAG 201 (227)
T ss_dssp GGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCHHHHHHHHHcCCCEEEEe
Confidence 4677889999877 68888888888876 89999999874
No 455
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=80.04 E-value=15 Score=35.05 Aligned_cols=81 Identities=16% Similarity=0.138 Sum_probs=54.9
Q ss_pred CCHHHHHHH---HHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecC
Q 017781 212 LSWKDVKWL---QTITKLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 284 (366)
Q Consensus 212 ~~~~~i~~l---r~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GG 284 (366)
+.|+..+.| ++..+++++ =.+++.++ .+.|+|.+.|... ....+..|..+.+. ..|||.+-|
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~-st~fD~~svd~l~~~~v~~~KI~S~-------~~~N~pLL~~va~~---gKPviLstG 143 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAI-CTPFDEESVDLIEAHGIEIIKIASC-------SFTDWPLLERIARS---DKPVVASTA 143 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEE-EEECSHHHHHHHHHTTCCEEEECSS-------STTCHHHHHHHHTS---CSCEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCcEE-eccCCHHHHHHHHHcCCCEEEECcc-------cccCHHHHHHHHhh---CCcEEEECC
Confidence 556554444 455577754 34555554 7899999998442 23456677777642 689999999
Q ss_pred CCCHHHHHHHHH----hCcCEEE
Q 017781 285 VRRGTDVFKALA----LGASGIF 303 (366)
Q Consensus 285 I~~~~dv~kala----lGAd~V~ 303 (366)
..|-+++..|+. .|-+.+.
T Consensus 144 mstl~Ei~~Ave~i~~~g~~viL 166 (350)
T 3g8r_A 144 GARREDIDKVVSFMLHRGKDLTI 166 (350)
T ss_dssp TCCHHHHHHHHHHHHTTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEE
Confidence 999999988865 3655333
No 456
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=79.67 E-value=20 Score=34.05 Aligned_cols=43 Identities=26% Similarity=0.258 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhC-cCEEEecH
Q 017781 262 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGR 306 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalG-Ad~V~igr 306 (366)
.++.+.++++.. .+||.++--+.+..|+.+++..| +|.|++--
T Consensus 228 d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~ 271 (365)
T 3ik4_A 228 DWAGMAQVTAQS--GFAVAADESARSAHDVLRIAREGTASVINIKL 271 (365)
T ss_dssp CHHHHHHHHHHS--SSCEEESTTCSSHHHHHHHHHHTCCSEEEECH
T ss_pred cHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHhCCCCEEEEcC
Confidence 577888888877 79999999999999999999987 78888863
No 457
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=79.60 E-value=37 Score=31.09 Aligned_cols=83 Identities=16% Similarity=0.093 Sum_probs=48.7
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------cCC--CceEEEeeecCCHHHH
Q 017781 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------TGP--GIRFFQLYVYKDRNVV 138 (366)
Q Consensus 73 Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~~~--~~~~~Qly~~~d~~~~ 138 (366)
|.++.|+.-.+-...++-..+++-.-+.|+...+ + ++.+.+.+|-.+ ... .|.+...- ..+.+..
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 87 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL-VDSIEDA 87 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC-CSSHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CccHHHH
Confidence 4445665322222223334666767778875543 3 334566665432 222 35666654 3456667
Q ss_pred HHHHHHHHHcCCCEEEEe
Q 017781 139 AQLVRRAERAGFKAIALT 156 (366)
Q Consensus 139 ~~~l~ra~~~G~~ai~vt 156 (366)
.++.+.++++|++++.+.
T Consensus 88 i~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLA 105 (294)
T ss_dssp HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc
Confidence 788999999999998873
No 458
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=79.33 E-value=3.5 Score=38.50 Aligned_cols=34 Identities=35% Similarity=0.825 Sum_probs=25.8
Q ss_pred CHHHHHHHHHhcCCCEEEEec-cCHHH----HH-cCCcEEEE
Q 017781 213 SWKDVKWLQTITKLPILVKGV-LTAED----VQ-AGAAGIIV 248 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v-~~~~d----~~-aGad~I~v 248 (366)
.|+.++++++ ++||+.=|. .+.+| .+ .|||+|.+
T Consensus 173 ~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~i 212 (318)
T 1vhn_A 173 EWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLV 212 (318)
T ss_dssp CGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEE
T ss_pred CHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEE
Confidence 4566667776 899998764 68887 44 79999987
No 459
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=79.31 E-value=40 Score=31.26 Aligned_cols=174 Identities=14% Similarity=0.096 Sum_probs=94.0
Q ss_pred ceEeccc-ccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 73 PIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 73 Pi~iApm-~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
|.++.|+ .-.+-...++-..+++-.-+.|+...+ + +..+.+.+|-.+ . .+ .|.+...- . +.+.
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~-st~~ 94 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG-Y-SVDT 94 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC-c-CHHH
Confidence 4445565 322222233334666667778876543 2 344567665432 1 22 35666654 3 6666
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHH
Q 017781 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDV 217 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 217 (366)
..++.+.|+++|++++.+. +|..- + | ...-..+..
T Consensus 95 ai~la~~A~~~Gadavlv~--~P~y~-~----------~--------------------------------s~~~l~~~f 129 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIH--QPVHP-Y----------I--------------------------------TDAGAVEYY 129 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCCS-C----------C--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCCC-C----------C--------------------------------CHHHHHHHH
Confidence 7788899999999998873 23210 0 0 000012345
Q ss_pred HHHHHhcCCCEEEEec---cCHHH-HHc-C---CcEEEEcCCCccCCCCCcchHHHHHHHHHHcCC--CceEEEecCCCC
Q 017781 218 KWLQTITKLPILVKGV---LTAED-VQA-G---AAGIIVSNHGARQLDYVPATIMALEEVVKATQG--RIPVFLDGGVRR 287 (366)
Q Consensus 218 ~~lr~~~~~pv~vK~v---~~~~d-~~a-G---ad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~--~i~vi~~GGI~~ 287 (366)
+.+-+.+++||++=.. ++++. .+. - +-+|.-+. ..+..+.++.+..++ ++.| .+|-
T Consensus 130 ~~va~a~~lPiilYn~tg~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~~f~v-~~G~--- 195 (314)
T 3d0c_A 130 RNIIEALDAPSIIYFKDAHLSDDVIKELAPLDKLVGIKYAI----------NDIQRVTQVMRAVPKSSNVAF-ICGT--- 195 (314)
T ss_dssp HHHHHHSSSCEEEEECCTTSCTHHHHHHTTCTTEEEEEECC----------CCHHHHHHHHHHSCGGGCCEE-EETT---
T ss_pred HHHHHhCCCCEEEEeCCCCcCHHHHHHHHcCCCEEEEEeCC----------CCHHHHHHHHHhcCCCCCEEE-EEeC---
Confidence 5566667888887541 33343 221 1 11222111 134455566666544 4554 4452
Q ss_pred HH-HHHHHHHhCcCEEEecHH
Q 017781 288 GT-DVFKALALGASGIFIGRP 307 (366)
Q Consensus 288 ~~-dv~kalalGAd~V~igr~ 307 (366)
.. .++.++++||+++.-+..
T Consensus 196 d~~~~~~~l~~G~~G~is~~a 216 (314)
T 3d0c_A 196 AEKWAPFFYHAGAVGFTSGLV 216 (314)
T ss_dssp HHHHHHHHHHHTCCEEEESGG
T ss_pred cHHHHHHHHHcCCCEEEecHH
Confidence 34 578899999999988874
No 460
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=79.23 E-value=1.7 Score=40.27 Aligned_cols=39 Identities=31% Similarity=0.432 Sum_probs=32.9
Q ss_pred CCHHHHHHHHHhcCCCEEE---EeccCHHH----HHcCCcEEEEcC
Q 017781 212 LSWKDVKWLQTITKLPILV---KGVLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 212 ~~~~~i~~lr~~~~~pv~v---K~v~~~~d----~~aGad~I~vs~ 250 (366)
.+|+.|+++++..++||++ .++.++++ .+.|+|+|.|..
T Consensus 185 ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGr 230 (291)
T 3o07_A 185 VPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGS 230 (291)
T ss_dssp SCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECG
T ss_pred CCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhCCCEEEEch
Confidence 4799999999998999875 46678988 889999998843
No 461
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=79.07 E-value=2.9 Score=41.89 Aligned_cols=63 Identities=19% Similarity=0.159 Sum_probs=45.8
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 306 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr 306 (366)
.++|++.+.++...|. ....++.+..+++..++++||++ |.|.+.+++.+++.+|||++.+|.
T Consensus 251 ~e~gv~~l~Vd~~~g~----~~~~~~~i~~lk~~~~~~~~Vi~-G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 251 VEAGADVLCIDSSDGF----SEWQKITIGWIREKYGDKVKVGA-GNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHTCSEEEECCSCCC----SHHHHHHHHHHHHHHGGGSCEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HhhhccceEEecccCc----ccchhhHHHHHHHhCCCCceEee-ccccCHHHHHHHHHhCCCeEEecc
Confidence 7779999988543332 12245667667666532277775 889999999999999999998763
No 462
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=78.92 E-value=17 Score=28.33 Aligned_cols=88 Identities=14% Similarity=0.088 Sum_probs=58.1
Q ss_pred HHHHHHHHhcCCCEEEEeccCHHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHH-cCCCceEEEecCCCCH
Q 017781 215 KDVKWLQTITKLPILVKGVLTAED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA-TQGRIPVFLDGGVRRG 288 (366)
Q Consensus 215 ~~i~~lr~~~~~pv~vK~v~~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~-~~~~i~vi~~GGI~~~ 288 (366)
+.++.+-+..+....+....+.++ .+...|.|++.-+-. +...++.+..+++. ....+|||+-.+-.+.
T Consensus 19 ~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~-----~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~ 93 (144)
T 3kht_A 19 ALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLP-----IANGFEVMSAVRKPGANQHTPIVILTDNVSD 93 (144)
T ss_dssp HHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCG-----GGCHHHHHHHHHSSSTTTTCCEEEEETTCCH
T ss_pred HHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCC-----CCCHHHHHHHHHhcccccCCCEEEEeCCCCH
Confidence 334444444454545666666665 455689888765421 22356777777652 1237899999999999
Q ss_pred HHHHHHHHhCcCEEEecHHH
Q 017781 289 TDVFKALALGASGIFIGRPV 308 (366)
Q Consensus 289 ~dv~kalalGAd~V~igr~~ 308 (366)
..+.+++.+||+.+.. .|+
T Consensus 94 ~~~~~~~~~ga~~~l~-Kp~ 112 (144)
T 3kht_A 94 DRAKQCMAAGASSVVD-KSS 112 (144)
T ss_dssp HHHHHHHHTTCSEEEE-CCT
T ss_pred HHHHHHHHcCCCEEEE-CCC
Confidence 9999999999998754 444
No 463
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=78.54 E-value=22 Score=32.90 Aligned_cols=88 Identities=22% Similarity=0.135 Sum_probs=53.8
Q ss_pred HHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCC-cc---CCCCCcchHH-HHHHHHHHcC-CCceEEEec--C
Q 017781 217 VKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHG-AR---QLDYVPATIM-ALEEVVKATQ-GRIPVFLDG--G 284 (366)
Q Consensus 217 i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~g-g~---~~~~~~~~~~-~l~~i~~~~~-~~i~vi~~G--G 284 (366)
++.+++. +.|+.+=++.+.-. .++|+|+|.+|+.+ +. ..|.++-+++ .+..+++..+ -++||++|. |
T Consensus 7 lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~G 85 (290)
T 2hjp_A 7 LRAALDS-GRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTG 85 (290)
T ss_dssp HHHHHHH-CCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTT
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4444443 56888877766655 88999999998631 11 2344544553 3333333222 179999987 4
Q ss_pred CCCHHHHH----HHHHhCcCEEEec
Q 017781 285 VRRGTDVF----KALALGASGIFIG 305 (366)
Q Consensus 285 I~~~~dv~----kalalGAd~V~ig 305 (366)
..++.++. +.+..||++|.|=
T Consensus 86 yg~~~~~~~~v~~l~~aGa~gv~iE 110 (290)
T 2hjp_A 86 FGNAVNVHYVVPQYEAAGASAIVME 110 (290)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEc
Confidence 44665554 3455899999873
No 464
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=78.53 E-value=41 Score=30.93 Aligned_cols=136 Identities=19% Similarity=0.188 Sum_probs=0.0
Q ss_pred EecccccccccCChhhHHHHHHHHHcCCceecCCCCCC-------------------CHHHHhccCCCceEEEeeecC--
Q 017781 75 MIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS-------------------SVEEVASTGPGIRFFQLYVYK-- 133 (366)
Q Consensus 75 ~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs~~~~~-------------------~~e~i~~~~~~~~~~Qly~~~-- 133 (366)
+..|.++ +...|+.+.+.|+.+++..-+.. ..+.|++..+.+... .-.+-
T Consensus 36 i~~~tay--------Da~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~pfgs 106 (281)
T 1oy0_A 36 WAMLTAY--------DYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVV-ADLPFGS 106 (281)
T ss_dssp EEEEECC--------SHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEE-EECCTTS
T ss_pred EEEEeCc--------CHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEE-EECCCCc
Q ss_pred ---CHHHHHHHHHHHHH-cCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccC
Q 017781 134 ---DRNVVAQLVRRAER-AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (366)
Q Consensus 134 ---d~~~~~~~l~ra~~-~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (366)
+.+...+-..|.-+ +|+.++-+ .+
T Consensus 107 y~~s~~~a~~na~rl~~eaGa~aVkl----------------------------------------------------Ed 134 (281)
T 1oy0_A 107 YEAGPTAALAAATRFLKDGGAHAVKL----------------------------------------------------EG 134 (281)
T ss_dssp STTCHHHHHHHHHHHHHTTCCSEEEE----------------------------------------------------EB
T ss_pred ccCCHHHHHHHHHHHHHHhCCeEEEE----------------------------------------------------CC
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHH--------------------------HHcCCcEEEEcCCCccCCCCCcchH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAED--------------------------VQAGAAGIIVSNHGARQLDYVPATI 263 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d--------------------------~~aGad~I~vs~~gg~~~~~~~~~~ 263 (366)
.....+.|+.+.+. ++||.-=..+++.. .++|||+|++-. .+.
T Consensus 135 g~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~----------vp~ 203 (281)
T 1oy0_A 135 GERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEM----------VPA 203 (281)
T ss_dssp SGGGHHHHHHHHHH-TCCEEEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEEES----------CCH
T ss_pred cHHHHHHHHHHHHC-CCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEec----------CCH
Q ss_pred HHHHHHHHHcCCCceEEEecC
Q 017781 264 MALEEVVKATQGRIPVFLDGG 284 (366)
Q Consensus 264 ~~l~~i~~~~~~~i~vi~~GG 284 (366)
+...++.+.+ ++|+|.-|.
T Consensus 204 ~~a~~it~~l--~iP~igIGa 222 (281)
T 1oy0_A 204 ELATQITGKL--TIPTVGIGA 222 (281)
T ss_dssp HHHHHHHHHC--SSCEEEESS
T ss_pred HHHHHHHHhC--CCCEEEeCC
No 465
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=78.29 E-value=2.5 Score=40.63 Aligned_cols=64 Identities=16% Similarity=0.100 Sum_probs=46.4
Q ss_pred HHcCCcEEEEcCCCcc---CC--CCCcchH-HHHHHHHHHcCCCceEEEecCC---CCHHHHHHHHHhCcCEEEec
Q 017781 239 VQAGAAGIIVSNHGAR---QL--DYVPATI-MALEEVVKATQGRIPVFLDGGV---RRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~---~~--~~~~~~~-~~l~~i~~~~~~~i~vi~~GGI---~~~~dv~kalalGAd~V~ig 305 (366)
..+|+|++.++-.... +. +.....+ +.+.++++.+ ++||++-+ + .+.+++.++..+|||+|.++
T Consensus 165 e~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~PVivK~-vg~g~s~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 165 RDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL--QLPFILKE-VGFGMDVKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC--CSCEEEEE-CSSCCCHHHHHHHHHHTCCEEECC
T ss_pred HhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh--CCCEEEEE-CCCCCCHHHHHHHHHcCCCEEEEe
Confidence 5789999988643221 11 1112123 6788888877 79999985 7 78999999999999999884
No 466
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=78.17 E-value=2.3 Score=42.11 Aligned_cols=60 Identities=20% Similarity=0.287 Sum_probs=41.1
Q ss_pred HcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHhCcCE------EEecHHHHHH
Q 017781 240 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASG------IFIGRPVVYS 311 (366)
Q Consensus 240 ~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~-~~dv~kalalGAd~------V~igr~~l~~ 311 (366)
++|.|+++++.. ..+.+..+++.+++ .+++ .=||+- +.+...+++.|+|. +.+|||++.+
T Consensus 169 ~~g~~GvV~gat----------~~~e~~~ir~~~~~-~~~l-~PGig~qg~tp~~a~~~g~d~~~~~~livvgR~I~~A 235 (453)
T 3qw4_B 169 VNGNVGLVVGAT----------DPVALARVRARAPT-LWFL-VPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARA 235 (453)
T ss_dssp TTSCEEEEECTT----------CHHHHHHHHHHCSS-CCEE-ECCSSTTCCCHHHHHHHHCCTTSCCEEEEESHHHHSC
T ss_pred hcCCeEEEECCC----------CHHHHHHHHHhCCC-CeEE-ECCcCCCCCCHHHHHHhcCCcccCCceEecChhhccC
Confidence 369999998652 12445677777753 4554 445542 34677778889998 9999999875
No 467
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=78.08 E-value=1.4 Score=40.78 Aligned_cols=100 Identities=19% Similarity=0.127 Sum_probs=58.4
Q ss_pred CCCCHHHHHHHHHhcCCCEEEEeccCHHHHHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHH
Q 017781 210 RSLSWKDVKWLQTITKLPILVKGVLTAEDVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 289 (366)
Q Consensus 210 ~~~~~~~i~~lr~~~~~pv~vK~v~~~~d~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~ 289 (366)
...+++.++++.+.. .+. +|+|++.++.|-.. .. +.+--.++.+.+..++|||+--|=.+-.
T Consensus 14 g~iD~~~l~~lv~~l--------------i~~-v~gl~v~GttGE~~--~L-s~~Er~~v~~~~~~rvpviaGvg~~~t~ 75 (283)
T 2pcq_A 14 GRLDEEAFRELAQAL--------------EPL-VDGLLVYGSNGEGV--HL-TPEERARGLRALRPRKPFLVGLMEETLP 75 (283)
T ss_dssp CCBCHHHHHHHHHHH--------------GGG-SSCCEETCTTTTGG--GS-CHHHHHHHHHTCCCSSCCEEEECCSSHH
T ss_pred CCcCHHHHHHHHHHH--------------Hhh-CCEEEECCcCcCch--hc-CHHHHHHHHHHHHhCCcEEEeCCCCCHH
Confidence 345666665554432 456 89999887765321 11 2233334444332278887655544545
Q ss_pred HHHH----HHHhCcCEEEecHHHHHHhhhcCHHHHHHHHHHHHH
Q 017781 290 DVFK----ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLRE 329 (366)
Q Consensus 290 dv~k----alalGAd~V~igr~~l~~l~~~G~~gv~~~~~~l~~ 329 (366)
++++ |-.+|||++++-.|+++... .++++.++++.+.+
T Consensus 76 ~ai~la~~A~~~Gadavlv~~P~y~~~~--~~~~l~~~f~~va~ 117 (283)
T 2pcq_A 76 QAEGALLEAKAAGAMALLATPPRYYHGS--LGAGLLRYYEALAE 117 (283)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCTTGGG--TTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEecCCcCCCCC--CHHHHHHHHHHHhc
Confidence 5443 34479999999999987531 35666666665544
No 468
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=77.80 E-value=15 Score=34.37 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=53.8
Q ss_pred HHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCC-----ccCCCCCcchHH----HHHHHHHHcCCCceEEEec
Q 017781 217 VKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHG-----ARQLDYVPATIM----ALEEVVKATQGRIPVFLDG 283 (366)
Q Consensus 217 i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~g-----g~~~~~~~~~~~----~l~~i~~~~~~~i~vi~~G 283 (366)
++.+++. +.|+++=++.+.-. .++|+|+|.+++.+ | ..|.++-+++ .+..|.+.. ++||++|.
T Consensus 21 lr~l~~~-~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G-~pD~~~vt~~em~~~~~~I~r~~--~~pviaD~ 96 (305)
T 3ih1_A 21 FRALVEA-NEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKG-LPDLGIVTSTEVAERARDLVRAT--DLPVLVDI 96 (305)
T ss_dssp HHHHHHS-SSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHT-CCSSSCSCHHHHHHHHHHHHHHH--CCCEEEEC
T ss_pred HHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCC-CCCCCcCCHHHHHHHHHHHHHhc--CCCEEEEC
Confidence 4444443 56787777766554 89999999998722 2 2344544443 344555555 78999987
Q ss_pred --CCCCHHHHHH----HHHhCcCEEEec
Q 017781 284 --GVRRGTDVFK----ALALGASGIFIG 305 (366)
Q Consensus 284 --GI~~~~dv~k----alalGAd~V~ig 305 (366)
|..++.++.+ ....||++|.|=
T Consensus 97 d~Gyg~~~~v~~~v~~l~~aGaagv~iE 124 (305)
T 3ih1_A 97 DTGFGGVLNVARTAVEMVEAKVAAVQIE 124 (305)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCcEEEEC
Confidence 4445555543 345899999764
No 469
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=77.69 E-value=44 Score=30.82 Aligned_cols=84 Identities=12% Similarity=0.053 Sum_probs=50.2
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
.|.++.|+.-.+-...++-..+++-.-+.|+...+ + +..+.+.+|-.+ . .+ .+.+...- ..+.+.
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 98 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAH 98 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHH
Confidence 45556676422223333345667777778875443 3 334566665432 1 22 35666653 356677
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q 017781 138 VAQLVRRAERAGFKAIALT 156 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vt 156 (366)
..++.+.++++|++++.+.
T Consensus 99 ai~la~~a~~~Gadavlv~ 117 (304)
T 3l21_A 99 SIRLAKACAAEGAHGLLVV 117 (304)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEC
Confidence 7888999999999998874
No 470
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=77.65 E-value=3.9 Score=38.94 Aligned_cols=39 Identities=21% Similarity=0.308 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHhc--CCCEEEE-eccCHHH----HHcCCcEEEEcC
Q 017781 212 LSWKDVKWLQTIT--KLPILVK-GVLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 212 ~~~~~i~~lr~~~--~~pv~vK-~v~~~~d----~~aGad~I~vs~ 250 (366)
..|+.|.++++.+ ++||+.= ++.+.+| ..+|||+|.+..
T Consensus 260 ~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igr 305 (345)
T 3oix_A 260 TALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGT 305 (345)
T ss_dssp HHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred HHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEECh
Confidence 4688999999998 6898776 4678888 789999998743
No 471
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=77.54 E-value=24 Score=27.74 Aligned_cols=86 Identities=13% Similarity=0.023 Sum_probs=57.7
Q ss_pred HHHHHHHhcCCCEEEEeccCHHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHH
Q 017781 216 DVKWLQTITKLPILVKGVLTAED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 290 (366)
Q Consensus 216 ~i~~lr~~~~~pv~vK~v~~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~d 290 (366)
.++.+-+..+.-.++....+.++ .+...|.|++.-+-. +...++.+..+++.. ..+|||+-.+-.+...
T Consensus 30 ~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~-----~~~g~~~~~~l~~~~-~~~~ii~~s~~~~~~~ 103 (152)
T 3eul_A 30 GVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMP-----GMDGAQVAAAVRSYE-LPTRVLLISAHDEPAI 103 (152)
T ss_dssp HHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTCS-----SSCHHHHHHHHHHTT-CSCEEEEEESCCCHHH
T ss_pred HHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCC-----CCCHHHHHHHHHhcC-CCCeEEEEEccCCHHH
Confidence 34433333342334555666665 566789998875421 224567777777643 4789999999999999
Q ss_pred HHHHHHhCcCEEEecHHH
Q 017781 291 VFKALALGASGIFIGRPV 308 (366)
Q Consensus 291 v~kalalGAd~V~igr~~ 308 (366)
+.+++.+||+.+.. .|+
T Consensus 104 ~~~~~~~g~~~~l~-Kp~ 120 (152)
T 3eul_A 104 VYQALQQGAAGFLL-KDS 120 (152)
T ss_dssp HHHHHHTTCSEEEE-TTC
T ss_pred HHHHHHcCCCEEEe-cCC
Confidence 99999999998755 454
No 472
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=77.49 E-value=24 Score=27.70 Aligned_cols=74 Identities=12% Similarity=0.062 Sum_probs=53.7
Q ss_pred EEEEeccCHHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEE
Q 017781 228 ILVKGVLTAED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGI 302 (366)
Q Consensus 228 v~vK~v~~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V 302 (366)
..+....+.++ .+...|.|++.-+-. +...++.+..+++.. ..+|||+-.+-.+...+.+++.+||+.+
T Consensus 47 ~~v~~~~~~~~al~~l~~~~~dlii~D~~l~-----~~~g~~~~~~l~~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~ 120 (150)
T 4e7p_A 47 ESVLQAKNGQEAIQLLEKESVDIAILDVEMP-----VKTGLEVLEWIRSEK-LETKVVVVTTFKRAGYFERAVKAGVDAY 120 (150)
T ss_dssp EEEEEESSHHHHHHHHTTSCCSEEEECSSCS-----SSCHHHHHHHHHHTT-CSCEEEEEESCCCHHHHHHHHHTTCSEE
T ss_pred EEEEEECCHHHHHHHhhccCCCEEEEeCCCC-----CCcHHHHHHHHHHhC-CCCeEEEEeCCCCHHHHHHHHHCCCcEE
Confidence 45666667666 456689888865421 224567777777643 4789999999999999999999999987
Q ss_pred EecHHH
Q 017781 303 FIGRPV 308 (366)
Q Consensus 303 ~igr~~ 308 (366)
.. .|+
T Consensus 121 l~-Kp~ 125 (150)
T 4e7p_A 121 VL-KER 125 (150)
T ss_dssp EE-TTS
T ss_pred Ee-cCC
Confidence 65 454
No 473
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=77.42 E-value=44 Score=30.71 Aligned_cols=173 Identities=14% Similarity=0.176 Sum_probs=94.5
Q ss_pred ceEecccccccccCChhhHHHHHHHHHcCCceec--C---CCCCCCHHHHhc-------c-CC--CceEEEeeecCCHHH
Q 017781 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVAS-------T-GP--GIRFFQLYVYKDRNV 137 (366)
Q Consensus 73 Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~v--s---~~~~~~~e~i~~-------~-~~--~~~~~Qly~~~d~~~ 137 (366)
|.++.|+ -.+-...++-..+++-.-+.|+...+ + +..+.+.+|-.+ . .+ .|.+...- ..+...
T Consensus 14 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~~ 91 (301)
T 3m5v_A 14 TALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATHE 91 (301)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHHH
T ss_pred EeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHHH
Confidence 4445565 22223333445677777778886543 2 334556665432 1 22 25555543 346667
Q ss_pred HHHHHHHHHHcCCCEEEEecCCCCCcchhHHHhhhcCCCCccccccccccccCCCccccchhhHHHhhhccCCCCCHHHH
Q 017781 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDV 217 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vtvd~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i 217 (366)
..++.++++++|++++.+. +|..- + | ...-..+..
T Consensus 92 ai~la~~a~~~Gadavlv~--~P~y~-~----------~--------------------------------s~~~l~~~f 126 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSV--APYYN-K----------P--------------------------------TQQGLYEHY 126 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCSS-C----------C--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCCC-C----------C--------------------------------CHHHHHHHH
Confidence 7788899999999998874 23210 0 0 000012345
Q ss_pred HHHHHhcCCCEEEEec-------cCHHH----HHc--CCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecC
Q 017781 218 KWLQTITKLPILVKGV-------LTAED----VQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 284 (366)
Q Consensus 218 ~~lr~~~~~pv~vK~v-------~~~~d----~~a--Gad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GG 284 (366)
+.+.+.+++||++=.+ ++++. .+. .+-+|.-+. ..+..+.++.+.. +++.| .+|.
T Consensus 127 ~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKdss----------gd~~~~~~~~~~~-~~f~v-~~G~ 194 (301)
T 3m5v_A 127 KAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGVKEAS----------GNIDKCVDLLAHE-PRMML-ISGE 194 (301)
T ss_dssp HHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------SCHHHHHHHHHHC-TTSEE-EECC
T ss_pred HHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEEEeCC----------CCHHHHHHHHHhC-CCeEE-EEcc
Confidence 5566666788877754 23343 222 222333221 1344455565555 46655 4453
Q ss_pred CCCHHHHHHHHHhCcCEEEecHH
Q 017781 285 VRRGTDVFKALALGASGIFIGRP 307 (366)
Q Consensus 285 I~~~~dv~kalalGAd~V~igr~ 307 (366)
...++.++++|++++.-+..
T Consensus 195 ---d~~~~~~l~~G~~G~is~~~ 214 (301)
T 3m5v_A 195 ---DAINYPILSNGGKGVISVTS 214 (301)
T ss_dssp ---GGGHHHHHHTTCCEEEESGG
T ss_pred ---HHHHHHHHHcCCCEEEehHH
Confidence 34477899999999987764
No 474
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=77.30 E-value=13 Score=31.89 Aligned_cols=59 Identities=19% Similarity=0.125 Sum_probs=41.7
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 306 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr 306 (366)
.+.|++.|.++... +...+.+.++++.++.+++ +..|-+.+.+++..++..|||+| ++.
T Consensus 32 ~~~G~~~iev~~~~-------~~~~~~i~~ir~~~~~~~~-ig~~~v~~~~~~~~a~~~Gad~i-v~~ 90 (205)
T 1wa3_A 32 FEGGVHLIEITFTV-------PDADTVIKELSFLKEKGAI-IGAGTVTSVEQCRKAVESGAEFI-VSP 90 (205)
T ss_dssp HHTTCCEEEEETTS-------TTHHHHHHHTHHHHHTTCE-EEEESCCSHHHHHHHHHHTCSEE-ECS
T ss_pred HHCCCCEEEEeCCC-------hhHHHHHHHHHHHCCCCcE-EEecccCCHHHHHHHHHcCCCEE-EcC
Confidence 78899999875421 2234567777766543344 44556889999999999999999 663
No 475
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=76.86 E-value=12 Score=34.65 Aligned_cols=85 Identities=24% Similarity=0.384 Sum_probs=54.8
Q ss_pred HHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCC-cc----CCCCCcchHH----HHHHHHHHcCCCceEEEec
Q 017781 217 VKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHG-AR----QLDYVPATIM----ALEEVVKATQGRIPVFLDG 283 (366)
Q Consensus 217 i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~g-g~----~~~~~~~~~~----~l~~i~~~~~~~i~vi~~G 283 (366)
++.+++. +.|+.+=++.+.-. .++|+|+|.+++.+ +. ..|.++-+++ .+..|.+.. ++||++|.
T Consensus 9 lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~ 85 (295)
T 1xg4_A 9 FRAALTK-ENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC--SLPLLVDA 85 (295)
T ss_dssp HHHHHHH-SSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC--CSCEEEEC
T ss_pred HHHHHhC-CCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC--CCCEEecC
Confidence 4444443 56888877766654 88999999998752 21 1344444443 344455555 68999998
Q ss_pred --CCC-CHHHHH----HHHHhCcCEEEe
Q 017781 284 --GVR-RGTDVF----KALALGASGIFI 304 (366)
Q Consensus 284 --GI~-~~~dv~----kalalGAd~V~i 304 (366)
|.. ++.++. +.+..||++|.|
T Consensus 86 d~Gyg~~~~~~~~~v~~l~~aGa~gv~i 113 (295)
T 1xg4_A 86 DIGFGSSAFNVARTVKSMIKAGAAGLHI 113 (295)
T ss_dssp TTCSSSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcccCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 544 555554 345689999987
No 476
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=76.77 E-value=31 Score=32.72 Aligned_cols=97 Identities=13% Similarity=0.163 Sum_probs=62.3
Q ss_pred CHHHHHHHHHhc--CCCEEEEeccCHHH----HHcCCcEEEEcCCCccCCCC----------C----cchHHHHHHHHHH
Q 017781 213 SWKDVKWLQTIT--KLPILVKGVLTAED----VQAGAAGIIVSNHGARQLDY----------V----PATIMALEEVVKA 272 (366)
Q Consensus 213 ~~~~i~~lr~~~--~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~~~~~----------~----~~~~~~l~~i~~~ 272 (366)
+|+-++.++... ++++-+-.+.+... .++|+..|... -||-.|+ + .+.+..+.++.+.
T Consensus 163 T~eGi~A~~~L~~eGI~vN~TliFS~~Qa~~aAeAGa~~ISPF--VGRidD~~~~~~~~~~~~~~~~~~Gv~~v~~i~~~ 240 (345)
T 3tkf_A 163 TWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPF--VGRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKL 240 (345)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEECCHHHHHHHHHTTCSEEEEB--SHHHHHHHHHHTTCSSCCCGGGCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEee--cchHHHHhhhccccccccccccCCHHHHHHHHHHH
Confidence 565444444322 89999999999887 89999988642 2221111 1 2334455555443
Q ss_pred c---CCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhhh
Q 017781 273 T---QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 314 (366)
Q Consensus 273 ~---~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~~ 314 (366)
. +.+..|++ -.+|+..+|.. .+|+|.+-|.-.++..+..
T Consensus 241 yk~~g~~T~Vl~-ASfRn~~~V~a--LaG~d~vTipp~lL~~L~~ 282 (345)
T 3tkf_A 241 YKSHGFKTIVMG-ASFRNVEQVIA--LAGCDALTISPVLLEELKN 282 (345)
T ss_dssp HHHHTCCSEEEE-BCCSSHHHHHT--TTTSSEEEECHHHHHHHHT
T ss_pred HHHcCCCCEEEe-CCCCCHHHHHH--HhCCCEEECCHHHHHHHHh
Confidence 3 33444555 55999999993 4699999999888877643
No 477
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=75.46 E-value=3.7 Score=39.58 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEec
Q 017781 262 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 305 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~ig 305 (366)
.++.+.++++.+ ++||++- |+.+.+++.+++.+|||+|.++
T Consensus 213 ~~~~i~~i~~~~--~~Pv~vk-gv~t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 213 NWEALRWLRDLW--PHKLLVK-GLLSAEDADRCIAEGADGVILS 253 (380)
T ss_dssp CHHHHHHHHHHC--CSEEEEE-EECCHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHhc--CCCEEEE-ecCcHHHHHHHHHcCCCEEEEc
Confidence 578888888887 7999885 5999999999999999999994
No 478
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=75.27 E-value=5.3 Score=35.64 Aligned_cols=60 Identities=17% Similarity=0.316 Sum_probs=43.2
Q ss_pred HHcCCcEEEEcCC---CccCCCCCcchHHHHHHHH---HHcCCCceEEE-----ecCCCCH--------HHHHHHHHhCc
Q 017781 239 VQAGAAGIIVSNH---GARQLDYVPATIMALEEVV---KATQGRIPVFL-----DGGVRRG--------TDVFKALALGA 299 (366)
Q Consensus 239 ~~aGad~I~vs~~---gg~~~~~~~~~~~~l~~i~---~~~~~~i~vi~-----~GGI~~~--------~dv~kalalGA 299 (366)
.+.|||-|-+... ||. -|++..+..++ +.+ ++||.+ .|++... .|+..+..+||
T Consensus 18 ~~~GAdRIELc~~L~~GGl-----TPS~g~i~~~~~~~~~~--~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~Ga 90 (224)
T 2bdq_A 18 DKAIISRVELCDNLAVGGT-----TPSYGVIKEANQYLHEK--GISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELES 90 (224)
T ss_dssp CTTTCCEEEEEBCGGGTCB-----CCCHHHHHHHHHHHHHT--TCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHcCCCEEEEcCCcccCCc-----CCCHHHHHHHHHhhhhc--CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCC
Confidence 8899999997643 332 35566666676 666 788776 3445444 47778888999
Q ss_pred CEEEec
Q 017781 300 SGIFIG 305 (366)
Q Consensus 300 d~V~ig 305 (366)
|+|.+|
T Consensus 91 dGvV~G 96 (224)
T 2bdq_A 91 DALVLG 96 (224)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 999999
No 479
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=75.19 E-value=36 Score=31.08 Aligned_cols=28 Identities=21% Similarity=0.116 Sum_probs=21.9
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIALTVDT 159 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~vtvd~ 159 (366)
..+.+...+.++++...|++++-+.+|.
T Consensus 48 ~~~~~e~~~~~~~~~~~gaD~VElRvD~ 75 (276)
T 3o1n_A 48 GKTITDVKSEALAYREADFDILEWRVDH 75 (276)
T ss_dssp CSSHHHHHHHHHHHTTSCCSEEEEEGGG
T ss_pred CCCHHHHHHHHHHHhhCCCCEEEEEecc
Confidence 5677766777777777899999998884
No 480
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=75.18 E-value=32 Score=31.43 Aligned_cols=24 Identities=13% Similarity=0.045 Sum_probs=20.7
Q ss_pred cCCHHHHHHHHHHHHHcCCCEEEE
Q 017781 132 YKDRNVVAQLVRRAERAGFKAIAL 155 (366)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~v 155 (366)
.-|.+..++++++..+.|++++++
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~ 40 (289)
T 2yxg_A 17 EVDFDGLEENINFLIENGVSGIVA 40 (289)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEEE
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEE
Confidence 357888999999999999999886
No 481
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=74.88 E-value=8.6 Score=34.73 Aligned_cols=37 Identities=8% Similarity=0.175 Sum_probs=27.9
Q ss_pred CHHHHHHHHHhc-----CCCEEEEeccCHHH----HHcCCcEEEEc
Q 017781 213 SWKDVKWLQTIT-----KLPILVKGVLTAED----VQAGAAGIIVS 249 (366)
Q Consensus 213 ~~~~i~~lr~~~-----~~pv~vK~v~~~~d----~~aGad~I~vs 249 (366)
+++.|+++|+.. +.+|.|-|..+.+. .++|||.+++.
T Consensus 178 ~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~G 223 (246)
T 3inp_A 178 MLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAG 223 (246)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEES
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEe
Confidence 567788887753 47888887766554 99999999874
No 482
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=74.30 E-value=22 Score=40.15 Aligned_cols=114 Identities=13% Similarity=0.092 Sum_probs=80.2
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHc-----CCCce-EEEecCCCCHHHHHHHHHhCcCEEEecHHH--HH
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-----QGRIP-VFLDGGVRRGTDVFKALALGASGIFIGRPV--VY 310 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~-----~~~i~-vi~~GGI~~~~dv~kalalGAd~V~igr~~--l~ 310 (366)
.+.|+..|++|-++-..-....|++-++..+...+ +.++. |+=+|-+|+.-+++-.+-.||++|.=.-+| +.
T Consensus 597 v~~g~~iliLsDr~~~~~~~~ip~lla~~avh~~L~~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~Pyla~e~~~ 676 (1479)
T 1ea0_A 597 VRGGATHVILTDEAMGPARAAIPAILATGAVHTHLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTVNAYLAQEAIA 676 (1479)
T ss_dssp HHHTCCEEEEECTTCBTTEEECCHHHHHHHHHHHHHTTTCGGGCEEEEECSSCCSHHHHHHHHTTTCSEEECHHHHHHHH
T ss_pred HHCCCcEEEECCCCCCCCccCcCHHHHHHHHHHHHHhcCccccceEEEEeCCchhHHHHHHHHhcCccccCHHHHHHHHH
Confidence 77899999999865321112345555555555443 22455 455678999999998888999999644333 22
Q ss_pred HhhhcC-------HHHHHHHHHHHHHHHHHHHHHcCCCChhhhccccee
Q 017781 311 SLAAEG-------EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 352 (366)
Q Consensus 311 ~l~~~G-------~~gv~~~~~~l~~el~~~m~~~G~~~l~el~~~~l~ 352 (366)
.+...| .+.+.+++..+.+.|...|..+|.+.+..-++..+.
T Consensus 677 ~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiF 725 (1479)
T 1ea0_A 677 ERHRRGLFGSMPLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGNF 725 (1479)
T ss_dssp HHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHTTSCCE
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceee
Confidence 222223 357899999999999999999999999998877554
No 483
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica} SCOP: c.1.10.1
Probab=74.22 E-value=32 Score=32.37 Aligned_cols=99 Identities=11% Similarity=0.170 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHh--cCCCEEEEeccCHHH----HHcCCcEEEEc-C--------C-CccCCC-CCcchHHHHHHHHHH--
Q 017781 212 LSWKDVKWLQTI--TKLPILVKGVLTAED----VQAGAAGIIVS-N--------H-GARQLD-YVPATIMALEEVVKA-- 272 (366)
Q Consensus 212 ~~~~~i~~lr~~--~~~pv~vK~v~~~~d----~~aGad~I~vs-~--------~-gg~~~~-~~~~~~~~l~~i~~~-- 272 (366)
.+|+-++.++.. -++++-+-.+.+... .++|+..|... | + |+.... ...+.+..+.++.+.
T Consensus 143 ~T~eGl~A~~~L~~~GI~~N~TliFS~~Qa~aaA~AGa~~ISPFVgRidd~~~~~~~~~~~~~~~~~Gv~~v~~i~~~y~ 222 (329)
T 3m16_A 143 STWEGIQAAKILEAEGIHCNLTLLFHFAQAQACAEAGTTLISPFVGRILDWYKANSGQSEYSASEDPGVVSVTEIYNFYK 222 (329)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEEBHHHHHHHHHTTSSCCCCCTTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHHcCCcEEEeehhHHHHHhhhcccccccccccCcHHHHHHHHHHHHH
Confidence 356544444432 289999999999887 89999988642 1 0 111100 012344455555543
Q ss_pred -cCCCceEEEecCCCCHHHHHHHHHhCcCEEEecHHHHHHhh
Q 017781 273 -TQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 313 (366)
Q Consensus 273 -~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr~~l~~l~ 313 (366)
.+.+..|++ -.+|+..+|.. .+|+|.+-|.-.++..+.
T Consensus 223 ~~g~~T~v~~-ASfRn~~~V~a--LaG~d~vTipp~~l~~l~ 261 (329)
T 3m16_A 223 SHGFKTIVMG-ASFRNTGEIEE--LAGCDRLTISPELLAQLE 261 (329)
T ss_dssp HTTCCCEEEE-BCCSCHHHHHT--TTTSSEEEECHHHHHHHH
T ss_pred HcCCCCEEEe-CCCCCHHHHHH--hhCCCEEECCHHHHHHHH
Confidence 332444444 55999999994 369999999888877664
No 484
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=74.21 E-value=43 Score=30.65 Aligned_cols=90 Identities=13% Similarity=0.145 Sum_probs=56.4
Q ss_pred CHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCcc----CCCCCcchHHH-H---HHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGAR----QLDYVPATIMA-L---EEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~----~~~~~~~~~~~-l---~~i~~~~~~~i~vi 280 (366)
+...++.+++. +.|+++=++.+.-. .++|+|.|.+....+. ..|..+-+++. + ..+++.. +..+|+
T Consensus 5 t~~~lr~~k~~-g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~-~~~~vv 82 (275)
T 1o66_A 5 TVNTLQKMKAA-GEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA-KNAMIV 82 (275)
T ss_dssp CHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-SSSEEE
T ss_pred CHHHHHHHHhC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC-CCCeEE
Confidence 55566666654 56888777766554 8899999976432221 12444545543 3 3334444 235788
Q ss_pred EecCC----CCHHHHH----HHHHhCcCEEEe
Q 017781 281 LDGGV----RRGTDVF----KALALGASGIFI 304 (366)
Q Consensus 281 ~~GGI----~~~~dv~----kalalGAd~V~i 304 (366)
+|=+. .++++++ +.+..||++|-|
T Consensus 83 aD~pfgsy~~s~~~a~~na~rl~kaGa~aVkl 114 (275)
T 1o66_A 83 SDLPFGAYQQSKEQAFAAAAELMAAGAHMVKL 114 (275)
T ss_dssp EECCTTSSSSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EECCCCCccCCHHHHHHHHHHHHHcCCcEEEE
Confidence 99555 3677777 477799999998
No 485
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=73.75 E-value=13 Score=34.54 Aligned_cols=87 Identities=22% Similarity=0.199 Sum_probs=51.5
Q ss_pred HHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCC-cc---CCCCCcchH----HHHHHHHHHcCCCceEEEec
Q 017781 216 DVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHG-AR---QLDYVPATI----MALEEVVKATQGRIPVFLDG 283 (366)
Q Consensus 216 ~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~g-g~---~~~~~~~~~----~~l~~i~~~~~~~i~vi~~G 283 (366)
.++.+++. +.|+.+=++.+.-. .++|+|+|.+|+.+ +. ..|.++-++ ..+..|.+.. ++||++|.
T Consensus 10 ~lr~l~~~-~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~ 86 (295)
T 1s2w_A 10 QLKQMLNS-KDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS--DVPILLDA 86 (295)
T ss_dssp HHHHHHHS-SSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTC--SSCEEEEC
T ss_pred HHHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEecC
Confidence 34455442 56888877776655 88899999998642 21 123333333 2334444444 79999997
Q ss_pred --CCCCHHHHH----HHHHhCcCEEEec
Q 017781 284 --GVRRGTDVF----KALALGASGIFIG 305 (366)
Q Consensus 284 --GI~~~~dv~----kalalGAd~V~ig 305 (366)
|..+..++. +.+..||.+|.|=
T Consensus 87 d~Gyg~~~~v~~~v~~l~~aGaagv~iE 114 (295)
T 1s2w_A 87 DTGYGNFNNARRLVRKLEDRGVAGACLE 114 (295)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 455655554 3455899999873
No 486
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=73.35 E-value=20 Score=33.32 Aligned_cols=23 Identities=22% Similarity=0.199 Sum_probs=19.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEE
Q 017781 133 KDRNVVAQLVRRAERAGFKAIAL 155 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~v 155 (366)
-|.+..++++++..+.|++++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v 52 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVP 52 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEe
Confidence 46788889999998999999864
No 487
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=73.14 E-value=40 Score=30.66 Aligned_cols=90 Identities=12% Similarity=0.073 Sum_probs=57.6
Q ss_pred CHHHHHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCCcc----CCCCCcchHH-HH---HHHHHHcCCCceEE
Q 017781 213 SWKDVKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHGAR----QLDYVPATIM-AL---EEVVKATQGRIPVF 280 (366)
Q Consensus 213 ~~~~i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~gg~----~~~~~~~~~~-~l---~~i~~~~~~~i~vi 280 (366)
+...++.+++. +.|+.+=+..+.-. .++|+|.|.+....+. ..|..+-+++ .+ ..+++.. +..+|+
T Consensus 5 t~~~lr~~k~~-g~~i~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~-~~~~vv 82 (264)
T 1m3u_A 5 TISLLQKYKQE-KKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGA-PNCLLL 82 (264)
T ss_dssp CHHHHHHHHHH-TCCEEEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-TTSEEE
T ss_pred CHHHHHHHHHC-CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhC-CCCcEE
Confidence 55566666654 55888777766554 8899999988432221 1244455554 33 3334443 235788
Q ss_pred EecCCC---CHHHHH----HHHHhCcCEEEe
Q 017781 281 LDGGVR---RGTDVF----KALALGASGIFI 304 (366)
Q Consensus 281 ~~GGI~---~~~dv~----kalalGAd~V~i 304 (366)
+|=+.. ++++++ +.+..||++|-|
T Consensus 83 aD~pfgsy~~~~~a~~~a~rl~kaGa~aVkl 113 (264)
T 1m3u_A 83 ADLPFMAYATPEQAFENAATVMRAGANMVKI 113 (264)
T ss_dssp EECCTTSSSSHHHHHHHHHHHHHTTCSEEEC
T ss_pred EECCCCCcCCHHHHHHHHHHHHHcCCCEEEE
Confidence 887775 777777 467789999988
No 488
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=72.92 E-value=4.5 Score=37.45 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHhc--CCCEEEEe-ccCHHH----HHcCCcEEEEcC
Q 017781 211 SLSWKDVKWLQTIT--KLPILVKG-VLTAED----VQAGAAGIIVSN 250 (366)
Q Consensus 211 ~~~~~~i~~lr~~~--~~pv~vK~-v~~~~d----~~aGad~I~vs~ 250 (366)
....+.|+++++.+ ++||++.+ +.+.++ .++|||+|++.+
T Consensus 211 ~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGS 257 (286)
T 3vk5_A 211 HVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAG 257 (286)
T ss_dssp CCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESG
T ss_pred cCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECc
Confidence 34678899999999 89999995 568877 889999999865
No 489
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=72.72 E-value=59 Score=29.98 Aligned_cols=84 Identities=14% Similarity=-0.004 Sum_probs=49.8
Q ss_pred CceEecccccccccCChhhHHHHHHHHHcCCcee--c---CCCCCCCHHHHhc-------c-CC-CceEEEeeecCCHHH
Q 017781 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--L---SSWSTSSVEEVAS-------T-GP-GIRFFQLYVYKDRNV 137 (366)
Q Consensus 72 ~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~--v---s~~~~~~~e~i~~-------~-~~-~~~~~Qly~~~d~~~ 137 (366)
.|.++.|+.-.+-...++-..+++-.-+.|+... + |+..+.+.+|-.+ . .+ .|.+...- ..+...
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 91 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQV 91 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHH
Confidence 4555667643222223333466666667887543 2 3344566665432 1 22 35666654 345666
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q 017781 138 VAQLVRRAERAGFKAIALT 156 (366)
Q Consensus 138 ~~~~l~ra~~~G~~ai~vt 156 (366)
..++.++++++|++++.+.
T Consensus 92 ai~la~~A~~~Gadavlv~ 110 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAM 110 (309)
T ss_dssp HHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 7788999999999998873
No 490
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=72.49 E-value=28 Score=26.35 Aligned_cols=84 Identities=17% Similarity=0.100 Sum_probs=53.9
Q ss_pred HHHHHHHhcCCCEEEEeccCHHH-----HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCCCCHHH
Q 017781 216 DVKWLQTITKLPILVKGVLTAED-----VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 290 (366)
Q Consensus 216 ~i~~lr~~~~~pv~vK~v~~~~d-----~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI~~~~d 290 (366)
.++.+-+..+..+ ....+.++ .+...|.|++.-+-. +...++.+..+++.. ..+|||+-.+-.+...
T Consensus 22 ~l~~~L~~~g~~v--~~~~~~~~a~~~l~~~~~dlvi~d~~l~-----~~~g~~~~~~l~~~~-~~~~ii~~t~~~~~~~ 93 (130)
T 3eod_A 22 LLDSWFSSLGATT--VLAADGVDALELLGGFTPDLMICDIAMP-----RMNGLKLLEHIRNRG-DQTPVLVISATENMAD 93 (130)
T ss_dssp HHHHHHHHTTCEE--EEESCHHHHHHHHTTCCCSEEEECCC----------CHHHHHHHHHTT-CCCCEEEEECCCCHHH
T ss_pred HHHHHHHhCCceE--EEeCCHHHHHHHHhcCCCCEEEEecCCC-----CCCHHHHHHHHHhcC-CCCCEEEEEcCCCHHH
Confidence 3444444445433 33556655 445689888765421 123456777776643 4789999999999999
Q ss_pred HHHHHHhCcCEEEecHHH
Q 017781 291 VFKALALGASGIFIGRPV 308 (366)
Q Consensus 291 v~kalalGAd~V~igr~~ 308 (366)
+.+++.+||+.+. -.|+
T Consensus 94 ~~~~~~~g~~~~l-~KP~ 110 (130)
T 3eod_A 94 IAKALRLGVEDVL-LKPV 110 (130)
T ss_dssp HHHHHHHCCSEEE-ESCC
T ss_pred HHHHHHcCCCEEE-eCCC
Confidence 9999999999874 4554
No 491
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=72.28 E-value=5.5 Score=38.15 Aligned_cols=42 Identities=24% Similarity=0.386 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHhCcCEEEecH
Q 017781 262 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 306 (366)
Q Consensus 262 ~~~~l~~i~~~~~~~i~vi~~GGI~~~~dv~kalalGAd~V~igr 306 (366)
.++.+.++++.. ++||++ +|+.+.+++.++..+|||+|.++.
T Consensus 213 ~~~~i~~l~~~~--~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 213 SWKDVAWLQTIT--SLPILV-KGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CHHHHHHHHHHC--CSCEEE-ECCCSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHh--CCCEEE-EecCCHHHHHHHHHcCCCEEEECC
Confidence 567788888877 799996 778999999999999999999953
No 492
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=72.25 E-value=44 Score=30.08 Aligned_cols=71 Identities=18% Similarity=0.147 Sum_probs=41.3
Q ss_pred CHHH-HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcC-CCceEEEecCC--------CCHHHHHHH----HHhCcC
Q 017781 235 TAED-VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ-GRIPVFLDGGV--------RRGTDVFKA----LALGAS 300 (366)
Q Consensus 235 ~~~d-~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~-~~i~vi~~GGI--------~~~~dv~ka----lalGAd 300 (366)
..++ .+.|+|.|.+...-|. . .....++.+.++++.+. ..+|+|...-. ++.+.+.++ ..+|||
T Consensus 97 ~ve~Ai~~Ga~~v~~~~nig~-~-~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD 174 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTIYPGS-G-FEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGAD 174 (263)
T ss_dssp CHHHHHHTTCSEEEEEECTTS-T-THHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCCEEEEEEecCC-c-CHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCC
Confidence 4555 8899999987543221 0 11112333444444332 26788877644 255666543 458999
Q ss_pred EEEecHH
Q 017781 301 GIFIGRP 307 (366)
Q Consensus 301 ~V~igr~ 307 (366)
.|-++.|
T Consensus 175 ~vkt~~~ 181 (263)
T 1w8s_A 175 AMKIKYT 181 (263)
T ss_dssp EEEEECC
T ss_pred EEEEcCC
Confidence 9999954
No 493
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=71.93 E-value=3.2 Score=41.24 Aligned_cols=60 Identities=22% Similarity=0.445 Sum_probs=47.5
Q ss_pred cccceeeecccc-CCCCCCccceeEc-CcccCCceEecccccccccCChhhHHHHHHHHHcCCceecC
Q 017781 42 AFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS 107 (366)
Q Consensus 42 ~f~~i~l~pr~l-~~~~~vd~st~l~-g~~l~~Pi~iApm~~~~l~~~~~e~~la~aa~~~G~~~~vs 107 (366)
.||++.|+|... ...+++|+++++. ...+..|++.|||...+ +..++.+.++.|...++.
T Consensus 16 ~~dd~~~~p~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~m~~vt------~~ela~ava~~GglG~i~ 77 (486)
T 2cu0_A 16 TFDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDTVT------EWEMAVAMAREGGLGVIH 77 (486)
T ss_dssp CGGGEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEEC
T ss_pred CccCEEEcCCcCCCCcceEEEEeeecCCcccccceEEccceeec------HHHHHHHHHhcCCceeec
Confidence 599999999876 4667999999986 47899999999997533 567777777777666664
No 494
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=71.90 E-value=24 Score=32.54 Aligned_cols=88 Identities=17% Similarity=0.203 Sum_probs=54.8
Q ss_pred HHHHHHhcCCCEEEEeccCHHH----HHcCCcEEEEcCCC-cc----CCCCCcchHH-HHHHHHHHcC-CCceEEEec--
Q 017781 217 VKWLQTITKLPILVKGVLTAED----VQAGAAGIIVSNHG-AR----QLDYVPATIM-ALEEVVKATQ-GRIPVFLDG-- 283 (366)
Q Consensus 217 i~~lr~~~~~pv~vK~v~~~~d----~~aGad~I~vs~~g-g~----~~~~~~~~~~-~l~~i~~~~~-~~i~vi~~G-- 283 (366)
++.+++. +.|+.+=++.+.-. .++|+|+|.+++.+ +. ..|.++-+++ .+..+++..+ -++||++|.
T Consensus 13 lr~l~~~-~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~ 91 (287)
T 3b8i_A 13 FRALLDS-SRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADH 91 (287)
T ss_dssp HHHHHHS-SCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTT
T ss_pred HHHHHhC-CCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4444432 56787777766554 88999999998752 21 2355555554 3333333222 278999987
Q ss_pred CCCCHHHHH----HHHHhCcCEEEec
Q 017781 284 GVRRGTDVF----KALALGASGIFIG 305 (366)
Q Consensus 284 GI~~~~dv~----kalalGAd~V~ig 305 (366)
|..++.++. +.+..||++|.|=
T Consensus 92 Gyg~~~~~~~~v~~l~~aGa~gv~iE 117 (287)
T 3b8i_A 92 GYGNALNVMRTVVELERAGIAALTIE 117 (287)
T ss_dssp CSSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEc
Confidence 455666654 3455899999884
No 495
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=71.42 E-value=13 Score=33.15 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=28.2
Q ss_pred CHHHHHHHHHhc-----CCCEEEEeccCHHH----HHcCCcEEEEc
Q 017781 213 SWKDVKWLQTIT-----KLPILVKGVLTAED----VQAGAAGIIVS 249 (366)
Q Consensus 213 ~~~~i~~lr~~~-----~~pv~vK~v~~~~d----~~aGad~I~vs 249 (366)
.++.|+++|+.. +.+|.|-|..+.++ .++|||.+++.
T Consensus 150 ~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 150 MLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVG 195 (231)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcCCCEEEEc
Confidence 466677777765 57888888765554 89999999985
No 496
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=71.28 E-value=19 Score=32.37 Aligned_cols=37 Identities=27% Similarity=0.348 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHhcCCCEEEEeccC---HHH--------HHcCCcEEEE
Q 017781 212 LSWKDVKWLQTITKLPILVKGVLT---AED--------VQAGAAGIIV 248 (366)
Q Consensus 212 ~~~~~i~~lr~~~~~pv~vK~v~~---~~d--------~~aGad~I~v 248 (366)
..|+.++++++..++||+.=|..+ .++ .++|++++.+
T Consensus 189 ~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 189 GDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp SSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 467888999988899988876543 444 4799999976
No 497
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=71.08 E-value=12 Score=35.68 Aligned_cols=55 Identities=31% Similarity=0.405 Sum_probs=0.0
Q ss_pred HHcCCcEEEEcCCCccCCCCCcchHHHHHHHHHHcCCCceEEEecCC-CCHHHHHHHHHhCcCEEEe
Q 017781 239 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV-RRGTDVFKALALGASGIFI 304 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~i~vi~~GGI-~~~~dv~kalalGAd~V~i 304 (366)
.++|+|.|.++- -.....+++++|++.. ++|+++| | .++.-+.+|+..|+|.+=|
T Consensus 56 ~~aG~diVRvav-------p~~~~a~al~~I~~~~--~vPlvaD--iHf~~~lal~a~e~G~dklRI 111 (366)
T 3noy_A 56 YEAGCEIVRVAV-------PHKEDVEALEEIVKKS--PMPVIAD--IHFAPSYAFLSMEKGVHGIRI 111 (366)
T ss_dssp HHTTCCEEEEEC-------CSHHHHHHHHHHHHHC--SSCEEEE--CCSCHHHHHHHHHTTCSEEEE
T ss_pred HHcCCCEEEeCC-------CChHHHHHHHHHHhcC--CCCEEEe--CCCCHHHHHHHHHhCCCeEEE
No 498
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=70.97 E-value=31 Score=31.61 Aligned_cols=23 Identities=22% Similarity=0.192 Sum_probs=19.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEE
Q 017781 133 KDRNVVAQLVRRAERAGFKAIAL 155 (366)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~v 155 (366)
-|.+..++++++..+.|++++++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~ 41 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVS 41 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEE
Confidence 47788899999998999999876
No 499
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=70.62 E-value=20 Score=38.88 Aligned_cols=87 Identities=18% Similarity=0.145 Sum_probs=53.4
Q ss_pred HHHHHHHhc-CCCEEEEec--cCHHH--------HHcCCcEEEEcCCCcc--CC-CCC------c-chHHHHHHHHHHcC
Q 017781 216 DVKWLQTIT-KLPILVKGV--LTAED--------VQAGAAGIIVSNHGAR--QL-DYV------P-ATIMALEEVVKATQ 274 (366)
Q Consensus 216 ~i~~lr~~~-~~pv~vK~v--~~~~d--------~~aGad~I~vs~~gg~--~~-~~~------~-~~~~~l~~i~~~~~ 274 (366)
.++++++.. +.|+++=.. .+.++ .++|+|+|.+.-.--. +. ..| + ...+.+..+++.+
T Consensus 624 ~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~- 702 (1025)
T 1gte_A 624 SVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV- 702 (1025)
T ss_dssp HHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-
Confidence 466777766 578777542 34554 5789999998532100 00 011 1 1234566666665
Q ss_pred CCceEEE--ecCCCCHHHHHHHH-HhCcCEEEe
Q 017781 275 GRIPVFL--DGGVRRGTDVFKAL-ALGASGIFI 304 (366)
Q Consensus 275 ~~i~vi~--~GGI~~~~dv~kal-alGAd~V~i 304 (366)
++||++ ..++.+..++++++ ..|||++.+
T Consensus 703 -~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 703 -QIPFFAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp -SSCEEEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred -CCceEEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 678774 55666777777766 489999998
No 500
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=70.28 E-value=16 Score=32.39 Aligned_cols=69 Identities=16% Similarity=0.055 Sum_probs=45.5
Q ss_pred HHcCCcEEEEcCCCccCCCCC-cchHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHH----HhCcCEEEecHH
Q 017781 239 VQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKAL----ALGASGIFIGRP 307 (366)
Q Consensus 239 ~~aGad~I~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~-~i~vi~~GGI~~~~dv~kal----alGAd~V~igr~ 307 (366)
.+.|||.|.+.-.-|.-.++. ....+.+..++++.++ .++||..-+.-+.+.+.++- .+|||+|=..+-
T Consensus 81 i~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTG 155 (220)
T 1ub3_A 81 CARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTSTG 155 (220)
T ss_dssp HHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred HHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 778999999754322111111 1234556666776643 47889988888988877654 379999988753
Done!