Query 017782
Match_columns 366
No_of_seqs 205 out of 1620
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 03:23:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017782.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017782hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10532 threonine and homoser 100.0 3.3E-27 7.1E-32 222.6 28.8 243 113-365 9-284 (293)
2 PRK11272 putative DMT superfam 100.0 5.6E-26 1.2E-30 214.2 28.8 242 118-365 10-288 (292)
3 PLN00411 nodulin MtN21 family 99.9 1.4E-25 3E-30 216.0 27.6 249 114-365 11-331 (358)
4 PRK11689 aromatic amino acid e 99.9 1.1E-24 2.4E-29 205.7 26.0 237 115-365 3-290 (295)
5 PRK11453 O-acetylserine/cystei 99.9 3.3E-24 7.1E-29 202.8 28.3 241 118-365 6-290 (299)
6 TIGR00950 2A78 Carboxylate/Ami 99.9 4.2E-23 9.2E-28 190.9 26.5 220 128-358 1-260 (260)
7 PRK15430 putative chlorampheni 99.9 2.6E-22 5.7E-27 189.5 25.6 237 113-361 5-284 (296)
8 COG5006 rhtA Threonine/homoser 99.9 9.5E-21 2.1E-25 167.2 24.7 237 117-362 13-282 (292)
9 TIGR03340 phn_DUF6 phosphonate 99.9 7.8E-20 1.7E-24 171.4 23.7 235 118-359 3-280 (281)
10 TIGR00817 tpt Tpt phosphate/ph 99.8 3.7E-19 8E-24 168.5 24.1 231 133-364 19-295 (302)
11 PTZ00343 triose or hexose phos 99.8 2.2E-18 4.8E-23 166.3 27.0 248 115-364 48-350 (350)
12 COG0697 RhaT Permeases of the 99.8 1.3E-17 2.9E-22 155.7 28.6 244 114-365 5-290 (292)
13 KOG4510 Permease of the drug/m 99.8 8.5E-22 1.8E-26 174.8 0.2 243 113-364 35-327 (346)
14 TIGR00688 rarD rarD protein. T 99.8 1.4E-17 3.1E-22 153.9 22.8 210 116-337 2-255 (256)
15 TIGR00776 RhaT RhaT L-rhamnose 99.7 6.2E-15 1.4E-19 138.8 24.0 232 117-364 2-290 (290)
16 PF06027 DUF914: Eukaryotic pr 99.7 5.8E-14 1.3E-18 133.2 26.6 249 112-364 9-307 (334)
17 COG2510 Predicted membrane pro 99.7 1.6E-15 3.5E-20 120.8 11.9 137 223-363 4-140 (140)
18 COG2962 RarD Predicted permeas 99.6 1.2E-13 2.6E-18 125.5 24.7 241 115-362 6-283 (293)
19 PF00892 EamA: EamA-like trans 99.5 4.9E-14 1.1E-18 114.9 11.4 125 232-361 1-125 (126)
20 KOG2765 Predicted membrane pro 99.3 7.1E-11 1.5E-15 110.5 17.1 253 110-364 8-392 (416)
21 TIGR03340 phn_DUF6 phosphonate 99.2 4.7E-10 1E-14 105.2 16.8 133 224-363 3-136 (281)
22 PRK15430 putative chlorampheni 99.2 8.1E-10 1.8E-14 104.4 17.4 141 219-362 5-145 (296)
23 PF08449 UAA: UAA transporter 99.2 1E-08 2.3E-13 97.2 24.3 232 131-365 15-300 (303)
24 TIGR00688 rarD rarD protein. T 99.2 9.9E-10 2.2E-14 101.5 15.6 139 222-362 2-142 (256)
25 PLN00411 nodulin MtN21 family 99.0 2.2E-08 4.7E-13 96.9 16.7 136 223-362 14-156 (358)
26 PF03151 TPT: Triose-phosphate 99.0 2.5E-08 5.5E-13 84.5 15.2 139 223-362 1-153 (153)
27 PRK11272 putative DMT superfam 99.0 4.8E-08 1E-12 92.1 18.1 132 224-363 10-142 (292)
28 PRK02971 4-amino-4-deoxy-L-ara 98.9 5.8E-08 1.3E-12 80.0 14.1 121 223-365 3-125 (129)
29 PRK11453 O-acetylserine/cystei 98.9 1.1E-07 2.3E-12 90.1 16.3 127 224-363 6-133 (299)
30 PF13536 EmrE: Multidrug resis 98.9 2.8E-08 6.1E-13 80.1 10.6 106 256-364 3-108 (113)
31 TIGR00950 2A78 Carboxylate/Ami 98.8 8.5E-08 1.8E-12 88.5 14.2 119 234-363 1-120 (260)
32 PRK11689 aromatic amino acid e 98.8 1.6E-07 3.5E-12 88.7 15.1 131 222-363 4-138 (295)
33 PRK15051 4-amino-4-deoxy-L-ara 98.7 2.5E-07 5.3E-12 74.3 11.8 68 295-362 42-109 (111)
34 KOG1441 Glucose-6-phosphate/ph 98.7 4.3E-07 9.4E-12 85.6 14.1 234 129-365 30-310 (316)
35 TIGR00817 tpt Tpt phosphate/ph 98.6 1.4E-06 3E-11 82.5 16.1 119 238-362 18-137 (302)
36 COG2962 RarD Predicted permeas 98.6 9.5E-07 2.1E-11 80.9 13.7 140 221-363 6-145 (293)
37 PTZ00343 triose or hexose phos 98.6 3.4E-06 7.4E-11 81.6 17.5 122 235-362 62-186 (350)
38 COG0697 RhaT Permeases of the 98.5 8.1E-06 1.7E-10 75.9 16.8 139 221-365 6-146 (292)
39 KOG2766 Predicted membrane pro 98.5 2E-07 4.4E-12 83.3 5.5 224 129-364 32-301 (336)
40 TIGR00776 RhaT RhaT L-rhamnose 98.4 5.3E-06 1.1E-10 78.2 14.1 132 223-364 2-138 (290)
41 COG2510 Predicted membrane pro 98.3 5.7E-06 1.2E-10 66.6 10.0 92 117-209 4-98 (140)
42 PF06800 Sugar_transport: Suga 98.3 0.00021 4.6E-09 65.9 21.2 174 174-359 42-268 (269)
43 KOG1581 UDP-galactose transpor 98.3 6.8E-05 1.5E-09 69.1 16.8 216 143-361 50-312 (327)
44 PRK10532 threonine and homoser 98.2 4.8E-05 1.1E-09 71.7 15.7 126 221-361 11-136 (293)
45 PF04142 Nuc_sug_transp: Nucle 98.2 0.00092 2E-08 61.3 23.3 223 114-353 13-244 (244)
46 KOG1580 UDP-galactose transpor 98.1 6.8E-05 1.5E-09 66.6 13.7 144 215-360 165-311 (337)
47 PF00892 EamA: EamA-like trans 98.1 1.1E-05 2.3E-10 65.2 7.2 83 126-209 1-85 (126)
48 KOG4510 Permease of the drug/m 98.0 9.1E-07 2E-11 79.7 -1.0 137 219-364 35-171 (346)
49 PRK13499 rhamnose-proton sympo 98.0 0.0057 1.2E-07 58.6 24.2 247 113-364 4-343 (345)
50 PF06027 DUF914: Eukaryotic pr 98.0 0.00023 4.9E-09 68.0 14.4 136 223-364 18-153 (334)
51 PRK09541 emrE multidrug efflux 97.9 0.00014 3.1E-09 58.1 9.9 69 296-364 36-105 (110)
52 PRK10452 multidrug efflux syst 97.9 0.00012 2.5E-09 59.4 9.3 69 296-364 36-105 (120)
53 PF04657 DUF606: Protein of un 97.7 0.0011 2.3E-08 55.4 13.3 131 223-359 2-138 (138)
54 COG2076 EmrE Membrane transpor 97.7 0.00035 7.6E-09 54.9 9.2 67 298-364 38-105 (106)
55 TIGR00803 nst UDP-galactose tr 97.7 0.00032 7E-09 63.3 9.8 61 299-359 161-221 (222)
56 PRK10650 multidrug efflux syst 97.7 0.0015 3.2E-08 52.1 12.3 65 298-362 43-108 (109)
57 KOG2234 Predicted UDP-galactos 97.7 0.059 1.3E-06 51.2 27.1 242 116-363 15-323 (345)
58 PRK11431 multidrug efflux syst 97.6 0.00063 1.4E-08 53.8 9.9 68 297-364 36-104 (105)
59 PF08449 UAA: UAA transporter 97.6 0.0021 4.5E-08 61.0 14.3 124 233-364 11-138 (303)
60 KOG1444 Nucleotide-sugar trans 97.5 0.013 2.8E-07 54.8 18.7 231 130-362 26-300 (314)
61 PF05653 Mg_trans_NIPA: Magnes 97.5 0.0003 6.6E-09 66.5 8.0 118 219-361 4-121 (300)
62 PF00893 Multi_Drug_Res: Small 97.4 0.0015 3.2E-08 50.6 9.5 57 297-353 36-93 (93)
63 KOG1443 Predicted integral mem 97.4 0.065 1.4E-06 49.9 20.6 216 144-360 45-313 (349)
64 KOG3912 Predicted integral mem 97.3 0.024 5.3E-07 52.0 16.8 230 129-361 16-333 (372)
65 COG3238 Uncharacterized protei 97.2 0.013 2.7E-07 49.2 13.2 139 222-365 5-149 (150)
66 PF06800 Sugar_transport: Suga 97.2 0.0047 1E-07 57.0 11.4 110 249-365 11-125 (269)
67 PRK13499 rhamnose-proton sympo 97.1 0.0067 1.5E-07 58.2 12.3 137 220-362 5-153 (345)
68 COG4975 GlcU Putative glucose 97.0 0.00059 1.3E-08 61.2 3.5 232 117-364 3-287 (288)
69 PF04142 Nuc_sug_transp: Nucle 96.8 0.0076 1.7E-07 55.3 9.3 78 286-364 14-91 (244)
70 KOG1582 UDP-galactose transpor 96.5 0.068 1.5E-06 48.9 12.5 143 221-364 189-334 (367)
71 COG4975 GlcU Putative glucose 96.2 0.0033 7.1E-08 56.6 2.6 132 223-365 3-139 (288)
72 KOG1442 GDP-fucose transporter 96.2 0.012 2.6E-07 53.8 6.0 147 217-364 180-329 (347)
73 PF10639 UPF0546: Uncharacteri 95.8 0.027 5.9E-07 45.0 5.9 109 229-360 3-112 (113)
74 COG5070 VRG4 Nucleotide-sugar 95.7 0.066 1.4E-06 47.6 8.4 142 219-361 152-295 (309)
75 KOG4314 Predicted carbohydrate 95.3 0.077 1.7E-06 46.3 7.5 144 219-364 132-278 (290)
76 PF05653 Mg_trans_NIPA: Magnes 94.9 0.85 1.8E-05 43.2 14.1 80 285-365 209-295 (300)
77 KOG2922 Uncharacterized conser 94.3 0.018 4E-07 53.8 1.2 120 218-362 17-136 (335)
78 KOG2234 Predicted UDP-galactos 94.1 1.9 4.1E-05 41.2 14.2 114 248-362 45-164 (345)
79 COG5006 rhtA Threonine/homoser 93.6 0.34 7.4E-06 44.1 7.8 95 115-209 147-241 (292)
80 PF03151 TPT: Triose-phosphate 93.4 1.3 2.9E-05 36.8 11.0 92 117-209 1-112 (153)
81 KOG4314 Predicted carbohydrate 93.3 0.072 1.6E-06 46.5 3.0 62 303-364 66-127 (290)
82 KOG1583 UDP-N-acetylglucosamin 92.5 1.8 3.9E-05 40.0 10.8 139 220-361 162-313 (330)
83 KOG1441 Glucose-6-phosphate/ph 92.3 0.11 2.4E-06 49.3 3.0 118 239-361 34-154 (316)
84 PF13536 EmrE: Multidrug resis 91.9 0.47 1E-05 37.8 5.8 55 149-203 2-60 (113)
85 PRK02237 hypothetical protein; 91.6 1.5 3.4E-05 34.4 8.1 47 319-365 62-108 (109)
86 KOG2765 Predicted membrane pro 90.7 0.27 5.7E-06 47.2 3.7 65 300-364 169-233 (416)
87 PF06379 RhaT: L-rhamnose-prot 90.2 5.7 0.00012 38.0 12.1 140 220-362 5-153 (344)
88 KOG1444 Nucleotide-sugar trans 89.1 13 0.00028 35.2 13.3 126 228-363 14-150 (314)
89 PF02694 UPF0060: Uncharacteri 88.6 1.1 2.3E-05 35.3 4.9 46 320-365 61-106 (107)
90 KOG3912 Predicted integral mem 87.8 1.3 2.7E-05 41.1 5.7 66 298-363 94-159 (372)
91 PF04657 DUF606: Protein of un 87.1 6.7 0.00015 32.6 9.4 91 118-209 3-95 (138)
92 PF04342 DUF486: Protein of un 85.9 2.5 5.3E-05 33.2 5.6 48 314-361 59-107 (108)
93 KOG1580 UDP-galactose transpor 84.1 3.6 7.8E-05 37.2 6.6 130 226-363 17-158 (337)
94 PF07857 DUF1632: CEO family ( 82.6 4 8.6E-05 37.6 6.5 127 223-362 1-134 (254)
95 KOG1581 UDP-galactose transpor 79.9 44 0.00096 31.6 12.2 107 249-363 50-156 (327)
96 KOG2922 Uncharacterized conser 78.4 35 0.00076 32.4 11.2 80 285-365 223-309 (335)
97 COG3169 Uncharacterized protei 76.3 7.2 0.00016 30.1 5.0 34 329-362 82-115 (116)
98 KOG1443 Predicted integral mem 75.5 13 0.00027 35.1 7.4 114 250-364 45-158 (349)
99 COG1742 Uncharacterized conser 75.1 13 0.00028 29.1 6.2 46 320-365 62-107 (109)
100 KOG4831 Unnamed protein [Funct 71.6 4.1 8.9E-05 32.0 2.8 59 303-361 65-124 (125)
101 PF06123 CreD: Inner membrane 70.7 1.2E+02 0.0026 30.3 13.9 101 223-339 301-401 (430)
102 PF07857 DUF1632: CEO family ( 69.9 21 0.00045 32.9 7.5 31 112-142 179-209 (254)
103 KOG1442 GDP-fucose transporter 69.8 3.2 6.9E-05 38.4 2.1 115 249-364 60-176 (347)
104 PRK11715 inner membrane protei 65.2 1.5E+02 0.0034 29.6 13.5 45 223-270 307-351 (436)
105 PF06379 RhaT: L-rhamnose-prot 62.5 1.5E+02 0.0033 28.5 22.3 245 114-363 5-341 (344)
106 COG4858 Uncharacterized membra 59.4 1.2E+02 0.0027 26.5 11.2 28 288-315 126-153 (226)
107 PRK02971 4-amino-4-deoxy-L-ara 58.5 1E+02 0.0022 25.2 13.6 77 116-208 2-78 (129)
108 PF07168 Ureide_permease: Urei 55.9 69 0.0015 30.3 8.1 118 121-239 1-149 (336)
109 PF05297 Herpes_LMP1: Herpesvi 55.4 3.9 8.5E-05 37.8 0.0 15 114-128 25-39 (381)
110 COG4858 Uncharacterized membra 47.5 2E+02 0.0043 25.3 11.7 20 224-243 196-215 (226)
111 KOG2766 Predicted membrane pro 42.9 3.8 8.2E-05 37.6 -2.1 63 300-362 88-150 (336)
112 PF06570 DUF1129: Protein of u 40.8 2.6E+02 0.0055 24.7 14.9 22 223-244 180-201 (206)
113 PF04246 RseC_MucC: Positive r 40.1 43 0.00093 27.4 4.0 46 314-360 65-113 (135)
114 COG3238 Uncharacterized protei 36.4 1.8E+02 0.004 24.5 7.1 73 115-187 4-79 (150)
115 COG1968 BacA Undecaprenyl pyro 35.2 3.8E+02 0.0081 25.0 14.0 69 117-186 86-158 (270)
116 PF05977 MFS_3: Transmembrane 34.9 5.2E+02 0.011 26.5 14.4 18 320-337 350-367 (524)
117 TIGR01167 LPXTG_anchor LPXTG-m 34.7 55 0.0012 19.5 2.9 24 342-365 10-33 (34)
118 PF10639 UPF0546: Uncharacteri 33.1 97 0.0021 24.8 4.7 70 122-208 2-71 (113)
119 COG3476 Tryptophan-rich sensor 32.3 3.2E+02 0.007 23.3 8.5 57 303-359 64-121 (161)
120 COG3086 RseC Positive regulato 30.7 89 0.0019 26.1 4.2 24 314-337 72-95 (150)
121 PF07168 Ureide_permease: Urei 30.4 15 0.00033 34.6 -0.3 131 228-360 2-144 (336)
122 COG5070 VRG4 Nucleotide-sugar 28.4 3.4E+02 0.0073 24.7 7.7 57 308-364 86-142 (309)
123 TIGR00844 c_cpa1 na(+)/h(+) an 28.0 8.2E+02 0.018 26.7 15.8 16 253-268 207-222 (810)
124 TIGR01299 synapt_SV2 synaptic 26.8 8.3E+02 0.018 26.3 14.9 39 231-269 605-643 (742)
125 TIGR02230 ATPase_gene1 F0F1-AT 23.8 3E+02 0.0065 21.5 5.9 21 252-272 46-66 (100)
126 PRK13108 prolipoprotein diacyl 22.2 8.2E+02 0.018 24.7 16.2 45 318-362 225-274 (460)
127 PF06570 DUF1129: Protein of u 21.3 2.1E+02 0.0046 25.2 5.4 20 117-136 112-131 (206)
128 PRK10862 SoxR reducing system 20.7 1.4E+02 0.0031 25.1 3.9 23 315-337 73-95 (154)
129 KOG1583 UDP-N-acetylglucosamin 20.4 67 0.0015 30.0 1.9 105 251-364 34-139 (330)
No 1
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.96 E-value=3.3e-27 Score=222.64 Aligned_cols=243 Identities=17% Similarity=0.190 Sum_probs=197.7
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHH
Q 017782 113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ 192 (366)
Q Consensus 113 ~~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 192 (366)
++.+++.++++++++|++++.++|++.++++|.++.++|++++.++++++...+++ +.+++++...+..|.+. +..+
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~~--~~~~~~~~~~~~~g~~~-~~~~ 85 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWRL--RFAKEQRLPLLFYGVSL-GGMN 85 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHhc--cCCHHHHHHHHHHHHHH-HHHH
Confidence 34788999999999999999999999999999999999999999998887644332 23457777777888764 5556
Q ss_pred HHHHHHhhccccccccc-----c--------------------------cc--cCCCCccchHHHHHHHHHHHHHHHHHH
Q 017782 193 GFLAQGLQRTSAGLGSA-----P--------------------------AF--DESNSSLWGSGEWWMLLAAQSMAVGTV 239 (366)
Q Consensus 193 ~~~~~al~~~~~~~a~~-----P--------------------------~~--~~~~~~~~~~G~l~allaa~~~a~~~v 239 (366)
.++++++++++++.+++ | .. +.+.......|++++++++++|++|.+
T Consensus 86 ~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~~~~~~~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v 165 (293)
T PRK10532 86 YLFYLSIQTVPLGIAVALEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYIL 165 (293)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHH
Confidence 68999999999999877 3 11 111122234699999999999999999
Q ss_pred HHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhH
Q 017782 240 MVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKL 319 (366)
Q Consensus 240 ~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~ 319 (366)
..|+..++.++... .+..+++++++.+.....+.. ...+...|..++++|++++.++|.+|++++++.+++++
T Consensus 166 ~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~a 238 (293)
T PRK10532 166 SGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAGE------ALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTF 238 (293)
T ss_pred HHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccCc------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHH
Confidence 99999888888765 455666666666655543221 12355667777899999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 320 SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 320 s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
+++.++||+++++++++++||+++..|++|+++|++|+++..++++
T Consensus 239 s~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~ 284 (293)
T PRK10532 239 GTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR 284 (293)
T ss_pred HHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999866543
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.95 E-value=5.6e-26 Score=214.17 Aligned_cols=242 Identities=25% Similarity=0.406 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 017782 118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQ 197 (366)
Q Consensus 118 ~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 197 (366)
.+.+++..++||++++++|...++++|.+++++|+.++.++++++...++++. .+++++......|.++...++.++++
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 88 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPL-PTLRQWLNAALIGLLLLAVGNGMVTV 88 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788889999999999999999999999999999999999998877655443 34567788888888877777788999
Q ss_pred Hh-hccccccccc-----c------------------------------cc-cCCCCccchHHHHHHHHHHHHHHHHHHH
Q 017782 198 GL-QRTSAGLGSA-----P------------------------------AF-DESNSSLWGSGEWWMLLAAQSMAVGTVM 240 (366)
Q Consensus 198 al-~~~~~~~a~~-----P------------------------------~~-~~~~~~~~~~G~l~allaa~~~a~~~v~ 240 (366)
+. ++++++.+++ | .. .+.+.+....|++++++++++||.|.+.
T Consensus 89 ~~~~~~~a~~a~~l~~~~Pl~~~lla~~~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~ 168 (292)
T PRK11272 89 AEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVW 168 (292)
T ss_pred HHHccCcHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 99 9999988877 2 01 1112233456999999999999999999
Q ss_pred HHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHH
Q 017782 241 VRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLS 320 (366)
Q Consensus 241 ~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s 320 (366)
.|+..++ ++...+.+++.++++.+.+.....+.+. ....+...|..+++.+++++.+++.+|++++|+.++++++
T Consensus 169 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s 243 (292)
T PRK11272 169 SSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERL----TALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT 243 (292)
T ss_pred HHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcc----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 9998654 4456677888888887777665443321 1123567899999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 321 SLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 321 ~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
.+.++||+++++++++++||++++.+++|+++|+.|+++..++++
T Consensus 244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999877553
No 3
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.95 E-value=1.4e-25 Score=216.00 Aligned_cols=249 Identities=13% Similarity=0.147 Sum_probs=198.2
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHhhc-CcCHHHHHHHHHHHHHHHHHHHHHHhCC--CCC-CChhHHHHHHHHHHHHHH
Q 017782 114 MLLEWAVLVSPFFFWGTAMVAMKEVLP-KAGTFFVAAFRLIPAGLLLITFASSQGR--KLP-SGFNAWVSIFLFALVDAS 189 (366)
Q Consensus 114 ~~~g~l~llla~~~~g~~~~~~k~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~--~~~-~~~~~~~~~~~~g~l~~~ 189 (366)
+.+.++.|++..++.+...++.|.+++ +++|+.+.++|+.+++++++++++.+++ +.+ ..++++..+.+.|+++ .
T Consensus 11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g-~ 89 (358)
T PLN00411 11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG-S 89 (358)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-H
Confidence 467899999999999999999999988 6999999999999999999998876543 222 2467778888899988 5
Q ss_pred HHHHHHHHHhhccccccccc-----c---------c-----------------------------cc--CC---------
Q 017782 190 CFQGFLAQGLQRTSAGLGSA-----P---------A-----------------------------FD--ES--------- 215 (366)
Q Consensus 190 ~~~~~~~~al~~~~~~~a~~-----P---------~-----------------------------~~--~~--------- 215 (366)
.++.++++|+++++++++++ | . .. +.
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~ 169 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPP 169 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 67778999999999999998 3 0 00 00
Q ss_pred -------------CCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCh-HHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Q 017782 216 -------------NSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDP-VMATGWHMVIGGLPLMVISVLNHDPVYGESV 281 (366)
Q Consensus 216 -------------~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 281 (366)
....+..|++++++++++|++|+++.|+..+++++ ...++++++++.+...+.....++.......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~ 249 (358)
T PLN00411 170 YLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWI 249 (358)
T ss_pred cccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccce
Confidence 00112459999999999999999999998777755 4667788888877777666654432111111
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 282 KELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 282 ~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
...+.. ...++|.+++ +.++|.+|++++++.++++++++.+++|+++++++++++||++++.+++|+++|++|++++.
T Consensus 250 ~~~~~~-~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 250 IHFDIT-LITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM 327 (358)
T ss_pred eccchH-HHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 223333 3457777765 56799999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCC
Q 017782 362 FRGS 365 (366)
Q Consensus 362 ~~~~ 365 (366)
+.++
T Consensus 328 ~~~~ 331 (358)
T PLN00411 328 WGKA 331 (358)
T ss_pred hhhh
Confidence 7664
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.94 E-value=1.1e-24 Score=205.67 Aligned_cols=237 Identities=17% Similarity=0.141 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 017782 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF 194 (366)
Q Consensus 115 ~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 194 (366)
.++++++++++++||++++..|...++++|..+.++|+.++.++++++.. +++. ++++++..+.+.++...+..+
T Consensus 3 ~~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~~--~~~~---~~~~~~~~~~~~l~~~~~~~~ 77 (295)
T PRK11689 3 QKATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTVG--FPRL---RQFPKRYLLAGGLLFVSYEIC 77 (295)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHcc--cccc---ccccHHHHHHHhHHHHHHHHH
Confidence 35688899999999999999999999999999999999999999887641 1111 122233445556666777777
Q ss_pred HHHHhhc----cccccccc-----c--------------------------------cccCCC-C---------ccchHH
Q 017782 195 LAQGLQR----TSAGLGSA-----P--------------------------------AFDESN-S---------SLWGSG 223 (366)
Q Consensus 195 ~~~al~~----~~~~~a~~-----P--------------------------------~~~~~~-~---------~~~~~G 223 (366)
++.++++ +++.++++ | ...++. . .....|
T Consensus 78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G 157 (295)
T PRK11689 78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLS 157 (295)
T ss_pred HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHH
Confidence 8888765 44555444 2 011111 0 112359
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHH
Q 017782 224 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS 303 (366)
Q Consensus 224 ~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~ 303 (366)
++++++++++||+|.++.||..++.++..... ..+++.+.+.....+.+ ....+...|..+++.+ ++++++
T Consensus 158 ~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~l~~~~-~~t~~~ 228 (295)
T PRK11689 158 YGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQP-----AMVFSLPAIIKLLLAA-AAMGFG 228 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCc-----cccCCHHHHHHHHHHH-HHHHHH
Confidence 99999999999999999999987777765422 22333333333333222 1235667888888888 578999
Q ss_pred HHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 304 YGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 304 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
|.+|++++|+.++++++.+.+++|+++++++++++||+++..+++|+++|+.|+++..+.+|
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence 99999999999999999999999999999999999999999999999999999988776543
No 5
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.94 E-value=3.3e-24 Score=202.79 Aligned_cols=241 Identities=20% Similarity=0.299 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 017782 118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQ 197 (366)
Q Consensus 118 ~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 197 (366)
.++.++++++||++++++|...++++|.++.++|+.+++++++++..+ ++. .+...+..|++....++.+++.
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~~--~~~-----~~~~~~~~g~~~~~~~~~~~~~ 78 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVAR--PKV-----PLNLLLGYGLTISFGQFAFLFC 78 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhcC--CCC-----chHHHHHHHHHHHHHHHHHHHH
Confidence 456788899999999999999999999999999999988777665421 111 1223444555555556667788
Q ss_pred Hhhc-cccccccc-----c--------------------------------cccC--CCCccchHHHHHHHHHHHHHHHH
Q 017782 198 GLQR-TSAGLGSA-----P--------------------------------AFDE--SNSSLWGSGEWWMLLAAQSMAVG 237 (366)
Q Consensus 198 al~~-~~~~~a~~-----P--------------------------------~~~~--~~~~~~~~G~l~allaa~~~a~~ 237 (366)
++++ .+++.+++ | ...+ +.......|++++++++++|++|
T Consensus 79 ~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~ 158 (299)
T PRK11453 79 AINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACG 158 (299)
T ss_pred HHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHH
Confidence 9988 57788776 2 1111 11122236999999999999999
Q ss_pred HHHHHHhhcCCCh---HHHHHHHHHHHHHHHHHHHHHhcCCC-cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 017782 238 TVMVRWVSKYSDP---VMATGWHMVIGGLPLMVISVLNHDPV-YGESVKELTSSDILALLYTSIFGSAISYGVYFYSATK 313 (366)
Q Consensus 238 ~v~~r~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~ 313 (366)
.++.|+..++.+. .....+.++.+.+.........+.+. ....+...+...|..++|+|+++++++|.+|++++++
T Consensus 159 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~ 238 (299)
T PRK11453 159 NIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGR 238 (299)
T ss_pred HHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999997654432 33445556665555444443333221 1011234567889999999999999999999999999
Q ss_pred CChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 314 GSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 314 ~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
.++++++.+.++||+++.+++++++||+++..+++|+++|++|+++..+.++
T Consensus 239 ~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 239 YETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 9999999999999999999999999999999999999999999999766543
No 6
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.92 E-value=4.2e-23 Score=190.92 Aligned_cols=220 Identities=27% Similarity=0.409 Sum_probs=184.0
Q ss_pred HhhHHHHHHHhhc-CcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 017782 128 WGTAMVAMKEVLP-KAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL 206 (366)
Q Consensus 128 ~g~~~~~~k~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~ 206 (366)
||+++++.|...+ +.|+.++.+.|++.+.+++.++...+ .+++++.+.+..|.++...++.++++|++++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~ 75 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGE 75 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh
Confidence 8999999999877 58999999999999988888876544 24467778889999888999999999999999999
Q ss_pred ccc-----c--------------------------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017782 207 GSA-----P--------------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD 249 (366)
Q Consensus 207 a~~-----P--------------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~ 249 (366)
+++ | ....++.+....|++++++++++|+.+.+..|+..++.+
T Consensus 76 ~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~ 155 (260)
T TIGR00950 76 AALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEG 155 (260)
T ss_pred hHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCC
Confidence 988 3 112222344567999999999999999999999887777
Q ss_pred hH--HHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHH
Q 017782 250 PV--MATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTP 327 (366)
Q Consensus 250 ~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~P 327 (366)
+. ....+++.++.+.+.+.....++. ...+...|..+++.+++++.++|.+|++++|+.++++++.+.+++|
T Consensus 156 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~p 229 (260)
T TIGR00950 156 PELLQFTGWVLLLGALLLLPFAWFLGPN------PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEP 229 (260)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCC------CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence 43 444567888888877776654432 1235678888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCChhHHHHHHHHHHHHH
Q 017782 328 MFASIFGFLYLGETFSPLQLVGAAVTVVAIY 358 (366)
Q Consensus 328 v~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~ 358 (366)
+++++++++++||+++..+++|+++++.|++
T Consensus 230 v~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 230 LVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999863
No 7
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.91 E-value=2.6e-22 Score=189.54 Aligned_cols=237 Identities=14% Similarity=0.094 Sum_probs=169.3
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-----CChhHHHHHHHHHHHH
Q 017782 113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLP-----SGFNAWVSIFLFALVD 187 (366)
Q Consensus 113 ~~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~g~l~ 187 (366)
++.+|++++++++++||.+++..|.. ++++|.++.++|++++.+++++++..+++... ++++.+ ...+.+.++
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 82 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAVL 82 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHHH
Confidence 34679999999999999999999975 67999999999999999988887655432111 122222 234467777
Q ss_pred HHHHHHHHHHHhhccccccccc-----c-------------------------------cccCCCCccchHHHHHHHHHH
Q 017782 188 ASCFQGFLAQGLQRTSAGLGSA-----P-------------------------------AFDESNSSLWGSGEWWMLLAA 231 (366)
Q Consensus 188 ~~~~~~~~~~al~~~~~~~a~~-----P-------------------------------~~~~~~~~~~~~G~l~allaa 231 (366)
.+.++.++++|+++++++++++ | .+..+.++ ..+++++++
T Consensus 83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~----~~~~~l~aa 158 (296)
T PRK15430 83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGS----LPIIALGLA 158 (296)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCC----ccHHHHHHH
Confidence 7888889999999999999988 3 00111111 125688999
Q ss_pred HHHHHHHHHHHHhhcCC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017782 232 QSMAVGTVMVRWVSKYS--DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFY 309 (366)
Q Consensus 232 ~~~a~~~v~~r~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~ 309 (366)
++||.|++..|+..++. +....+.+.+.++.+..... ...+ .. .....+...+..+++.| +.+.++|.+|++
T Consensus 159 ~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~-~~~~~~~~~~~~~~~~g-~~t~i~~~~~~~ 232 (296)
T PRK15430 159 FSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSS-TS-HMGQNPMSLNLLLIAAG-IVTTVPLLCFTA 232 (296)
T ss_pred HHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCC-cc-cccCCcHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 99999999999975322 22333344444444332211 1111 00 01111122334444455 467789999999
Q ss_pred HhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 310 SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 310 al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
++++.++++++++.|++|+++.+++++++||++++.+++|+++|+.|+.++.
T Consensus 233 a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 233 AATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988876654
No 8
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.89 E-value=9.5e-21 Score=167.19 Aligned_cols=237 Identities=19% Similarity=0.241 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 017782 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196 (366)
Q Consensus 117 g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 196 (366)
+++.++.+++.--....+.|.+.+.+++.....+|..+++++++++.+..+++ ..+++++.....|+.. +.++.+||
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~vG~~g~t~lRl~~aaLIll~l~RPwr~r--~~~~~~~~~~~yGvsL-g~MNl~FY 89 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPLVGAAGVTALRLAIAALILLALFRPWRRR--LSKPQRLALLAYGVSL-GGMNLLFY 89 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccccChhhHHHHHHHHHHHHHHHHhhHHHhc--cChhhhHHHHHHHHHH-HHHHHHHH
Confidence 68888999999999999999999999999999999999999999988665533 3557888999999875 55666999
Q ss_pred HHhhccccccccc-----c----------------------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHH
Q 017782 197 QGLQRTSAGLGSA-----P----------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRW 243 (366)
Q Consensus 197 ~al~~~~~~~a~~-----P----------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~ 243 (366)
.++++.|.+.+.. | ....+.......|..++++++.||+.|++..||
T Consensus 90 ~si~riPlGiAVAiEF~GPL~vA~~~sRr~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r 169 (292)
T COG5006 90 LSIERIPLGIAVAIEFTGPLAVALLSSRRLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQR 169 (292)
T ss_pred HHHHhccchhhhhhhhccHHHHHHHhccchhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcch
Confidence 9999999999876 3 112233455668999999999999999999999
Q ss_pred hhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhh
Q 017782 244 VSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLT 323 (366)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~ 323 (366)
..+..+...-+...+.+++++.+++......+. -.++.-...-+..+++++.+.|.+...++++.+....+.++
T Consensus 170 ~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~------l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~Ll 243 (292)
T COG5006 170 AGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPA------LFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLL 243 (292)
T ss_pred hcccCCCchHHHHHHHHHHHHHhhhhhhhcchh------hcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHH
Confidence 988888889999999999999999988665553 34566667777889999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 324 FLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 324 ~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
.+||.++++.|++++||++++.||+|.++|+.+..-..+
T Consensus 244 SLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 244 SLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred HhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999998875443
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.86 E-value=7.8e-20 Score=171.40 Aligned_cols=235 Identities=15% Similarity=0.152 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHh--CCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 017782 118 WAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ--GRKLPSGFNAWVSIFLFALVDASCFQGFL 195 (366)
Q Consensus 118 ~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~--~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 195 (366)
.++.++++++|+..++..|...++-++. .++++..+.+++.|+...+ ++..+..++++....+.+.++...++.++
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGL 80 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999999666654443 4777778888888877664 22223233445555556666677888899
Q ss_pred HHHhhccccccccc-----c--------------------------------cccCCCCccchHHHHHHHHHHHHHHHHH
Q 017782 196 AQGLQRTSAGLGSA-----P--------------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGT 238 (366)
Q Consensus 196 ~~al~~~~~~~a~~-----P--------------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~ 238 (366)
+.|+++++++.+++ | ....+.......|+.++++++++|++|.
T Consensus 81 ~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~ 160 (281)
T TIGR03340 81 AQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYS 160 (281)
T ss_pred HHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhh
Confidence 99999999999986 2 0111122233468889999999999999
Q ss_pred HHHHHhhcCCChHH----HHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 017782 239 VMVRWVSKYSDPVM----ATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKG 314 (366)
Q Consensus 239 v~~r~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~ 314 (366)
+..|+..++.++.. .+.+.++..++...+.....+... .......+..+++.+.+++.++|.+|++++++.
T Consensus 161 i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~ 235 (281)
T TIGR03340 161 LSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS-----MFPYARQILPSATLGGLMIGGAYALVLWAMTRL 235 (281)
T ss_pred hhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99998654444322 223333333222222222222111 112233556677888899999999999999999
Q ss_pred ChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHH
Q 017782 315 SLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 359 (366)
Q Consensus 315 ~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l 359 (366)
++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+++
T Consensus 236 ~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 236 PVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred CceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 999999999999999999999999999999999999999999976
No 10
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.85 E-value=3.7e-19 Score=168.54 Aligned_cols=231 Identities=13% Similarity=0.117 Sum_probs=173.9
Q ss_pred HHHHHhhcC-cCHHHHHHHHHHHHHHHHHHHHHH-hCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-
Q 017782 133 VAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASS-QGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA- 209 (366)
Q Consensus 133 ~~~k~~~~~-~~p~~~~~~R~~~a~l~l~~~~~~-~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a~~- 209 (366)
..-|+++++ ..|..+.++|+.++.+++.+.... ..++.+.+++++...+..|++. +.++.+.++++++++++.+++
T Consensus 19 ~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s~~~li 97 (302)
T TIGR00817 19 IYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVSFTHTI 97 (302)
T ss_pred HHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHHHHHH
Confidence 578999987 779999999999988776665321 1233344678899999999996 667789999999999999988
Q ss_pred ----c-------------------------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhc--CCChHH
Q 017782 210 ----P-------------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVM 252 (366)
Q Consensus 210 ----P-------------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~--~~~~~~ 252 (366)
| .....+.+....|++++++++++|++|.+..|+..+ ++|+..
T Consensus 98 ~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~ 177 (302)
T TIGR00817 98 KAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTN 177 (302)
T ss_pred HhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Confidence 3 011122233356999999999999999999999877 789999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccc-cccc----CCHH-HHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhH
Q 017782 253 ATGWHMVIGGLPLMVISVLNHDPVYGE-SVKE----LTSS-DILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLT 326 (366)
Q Consensus 253 ~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~----~~~~-~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~ 326 (366)
.+.++...+++.+.+.....++..... .... .... .+...+..+..+....+.++++++++.++++.+++.+++
T Consensus 178 ~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~ 257 (302)
T TIGR00817 178 LYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMK 257 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhh
Confidence 999999999998888877654322100 0000 0111 122122333223333335666899999999999999999
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 327 PMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 327 Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
|+++++++++++||+++..+++|++++++|++++++.|
T Consensus 258 pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k 295 (302)
T TIGR00817 258 RVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295 (302)
T ss_pred hhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988755
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.83 E-value=2.2e-18 Score=166.26 Aligned_cols=248 Identities=11% Similarity=0.065 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCC---ChhHHHHHHHHHHHHHHH
Q 017782 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLPS---GFNAWVSIFLFALVDASC 190 (366)
Q Consensus 115 ~~g~l~llla~~~~g~~~~~~k~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~---~~~~~~~~~~~g~l~~~~ 190 (366)
.+..++.+.--.+=.......|.+++.++ |..+..+|++++.++...+.....++.++ .++.++..+..|+++...
T Consensus 48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~ 127 (350)
T PTZ00343 48 WKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFV 127 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 44444444444444555778899999999 99999999999988765554332222221 235678888999988776
Q ss_pred HHHHHHHHhhccccccccc-----c-------------------------------cccCCCCccchHHHHHHHHHHHHH
Q 017782 191 FQGFLAQGLQRTSAGLGSA-----P-------------------------------AFDESNSSLWGSGEWWMLLAAQSM 234 (366)
Q Consensus 191 ~~~~~~~al~~~~~~~a~~-----P-------------------------------~~~~~~~~~~~~G~l~allaa~~~ 234 (366)
+. ..+.++++++++.+.+ | .....+.+....|+++++++++++
T Consensus 128 ~~-~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~~ 206 (350)
T PTZ00343 128 HF-GAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLGS 206 (350)
T ss_pred HH-HHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHHH
Confidence 55 4679999999999888 3 011122333456999999999999
Q ss_pred HHHHHHHHHhhcC-------CChHHHHHHHHHHHHHHHHHHHHHhcCCCccccc----ccCCHHHHHHHHHHHHHHHHHH
Q 017782 235 AVGTVMVRWVSKY-------SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESV----KELTSSDILALLYTSIFGSAIS 303 (366)
Q Consensus 235 a~~~v~~r~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~gv~~~~l~ 303 (366)
+++.+..|+..++ .++.....+..+.+++.++++....+.......+ ...+...+..+++ .++.+++.
T Consensus 207 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~ 285 (350)
T PTZ00343 207 SLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVW 285 (350)
T ss_pred HHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHH
Confidence 9999999997654 4566666777889998888887654432111000 0111112233344 34667889
Q ss_pred HHHHHH----HhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 304 YGVYFY----SATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 304 ~~l~~~----al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
+++++. +++++++...++..+++|+++++++++++||++++.+++|++++++|++++++-|
T Consensus 286 ~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 286 YYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 999995 9999999999999999999999999999999999999999999999999987643
No 12
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.82 E-value=1.3e-17 Score=155.68 Aligned_cols=244 Identities=27% Similarity=0.396 Sum_probs=186.7
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHhhcC-cCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHH
Q 017782 114 MLLEWAVLVSPFFFWGTAMVAMKEVLPK-AGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ 192 (366)
Q Consensus 114 ~~~g~l~llla~~~~g~~~~~~k~~~~~-~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 192 (366)
...+...+++..+.|+......|...++ .++....+.|+..+.++..+....++.......+.+....+.+.+......
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPF 84 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence 3456778888889999999999988886 777887888999988885544433321122222235567777777788888
Q ss_pred HHHHHHhhccccccccc-----c--------------------------------cccCCCCcc---chHHHHHHHHHHH
Q 017782 193 GFLAQGLQRTSAGLGSA-----P--------------------------------AFDESNSSL---WGSGEWWMLLAAQ 232 (366)
Q Consensus 193 ~~~~~al~~~~~~~a~~-----P--------------------------------~~~~~~~~~---~~~G~l~allaa~ 232 (366)
.+++.++++++++.+++ | .....+... ...|+++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~ 164 (292)
T COG0697 85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAAL 164 (292)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHH
Confidence 89999999999999977 2 011112211 3579999999999
Q ss_pred HHHHHHHHHHHhhcCCChHHHHH-HHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017782 233 SMAVGTVMVRWVSKYSDPVMATG-WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSA 311 (366)
Q Consensus 233 ~~a~~~v~~r~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al 311 (366)
+++++.+..|+.. +.++..... +.+. ............... .+.+...|..+.+.|++++++++.++++++
T Consensus 165 ~~a~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (292)
T COG0697 165 LWALYTALVKRLS-RLGPVTLALLLQLL--LALLLLLLFFLSGFG-----APILSRAWLLLLYLGVFSTGLAYLLWYYAL 236 (292)
T ss_pred HHHHHHHHHHHhc-CCChHHHHHHHHHH--HHHHHHHHHHhcccc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 667766666 4444 222222222211110 244677889999999999999999999999
Q ss_pred ccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 312 TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 312 ~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
++.+++.++++.+++|+++++++++++||+++..+++|+++|+.|+.+..++++
T Consensus 237 ~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 290 (292)
T COG0697 237 RLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290 (292)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999999999999999987654
No 13
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.82 E-value=8.5e-22 Score=174.83 Aligned_cols=243 Identities=15% Similarity=0.141 Sum_probs=198.2
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHH
Q 017782 113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQ 192 (366)
Q Consensus 113 ~~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 192 (366)
++.+|.+++.++ ..+.+..++.+. .-+.+|.+..-.|+++-.++..|..++++.....+.....+++++|+.|..+.+
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~-~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvm 112 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTK-VLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVM 112 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhh-hhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHH
Confidence 456778888787 667777777663 447899999999999999999998888776543333455677889999887776
Q ss_pred HHHHHHhhccccccccc-----c-------------------------------------cc--------cCCCCccchH
Q 017782 193 GFLAQGLQRTSAGLGSA-----P-------------------------------------AF--------DESNSSLWGS 222 (366)
Q Consensus 193 ~~~~~al~~~~~~~a~~-----P-------------------------------------~~--------~~~~~~~~~~ 222 (366)
..||+++|++.++|++ | .+ +.++.+....
T Consensus 113 -lmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~ 191 (346)
T KOG4510|consen 113 -LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIP 191 (346)
T ss_pred -HHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCC
Confidence 7799999999999998 1 11 1111133446
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 302 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l 302 (366)
|.+.++.++++.|.-.++.|++.|+.|....+.|..+++.+..++.....+... .+..+.+|+.++.+|+++ ++
T Consensus 192 gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~-----lP~cgkdr~l~~~lGvfg-fi 265 (346)
T KOG4510|consen 192 GTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQ-----LPHCGKDRWLFVNLGVFG-FI 265 (346)
T ss_pred chHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhcccee-----cCccccceEEEEEehhhh-hH
Confidence 899999999999999999999999999999999999999998887776655432 244677888888899765 66
Q ss_pred HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
+|.+.+.++|+..|..++++.+++.++|.+++++++||.|+++.|+|+++|+.+.+.+.++|
T Consensus 266 gQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 266 GQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred HHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998876543
No 14
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.80 E-value=1.4e-17 Score=153.90 Aligned_cols=210 Identities=12% Similarity=0.008 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC------C-CChhH-HHHHHHHHHHH
Q 017782 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL------P-SGFNA-WVSIFLFALVD 187 (366)
Q Consensus 116 ~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~------~-~~~~~-~~~~~~~g~l~ 187 (366)
+|++++++++++||++++++|. .++++|.++.++|++++.+++.+++..++++. + .++++ +....+.|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL- 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence 4789999999999999999997 56799999999999999988877664433211 1 11222 3345555555
Q ss_pred HHHHHHHHHHHhhccccccccc-----c-------------------------------cccCCCCccchHHHHHHHHHH
Q 017782 188 ASCFQGFLAQGLQRTSAGLGSA-----P-------------------------------AFDESNSSLWGSGEWWMLLAA 231 (366)
Q Consensus 188 ~~~~~~~~~~al~~~~~~~a~~-----P-------------------------------~~~~~~~~~~~~G~l~allaa 231 (366)
.+.++.++++|+++++++++++ | ....+..+ . .+++++++
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~-~---~~~~l~aa 155 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGS-L---PWEALVLA 155 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCC-c---hHHHHHHH
Confidence 5677889999999999999988 3 00111111 1 24688999
Q ss_pred HHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017782 232 QSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSA 311 (366)
Q Consensus 232 ~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al 311 (366)
++|+.|.+..|+..++ +........ +.............+.+.. .......+|..+++.|++ +.++|.++++++
T Consensus 156 ~~~a~~~i~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~ 229 (256)
T TIGR00688 156 FSFTAYGLIRKALKNT-DLAGFCLET-LSLMPVAIYYLLQTDFATV---QQTNPFPIWLLLVLAGLI-TGTPLLAFVIAA 229 (256)
T ss_pred HHHHHHHHHHhhcCCC-CcchHHHHH-HHHHHHHHHHHHHhccCcc---cccCchhHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 9999999999998643 332222111 1111111111111111110 011123478888888866 788999999999
Q ss_pred ccCChhhHHHhhhhHHHHHHHHHHHH
Q 017782 312 TKGSLTKLSSLTFLTPMFASIFGFLY 337 (366)
Q Consensus 312 ~~~~a~~~s~~~~l~Pv~a~i~~~l~ 337 (366)
|+.++++++++.|+||++++++++++
T Consensus 230 ~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 230 NRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999875
No 15
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.70 E-value=6.2e-15 Score=138.75 Aligned_cols=232 Identities=15% Similarity=0.135 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 017782 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196 (366)
Q Consensus 117 g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 196 (366)
++++.++++++||+..+..|... +.++.++. |..++.+++..+....+++....++.+...++.|++ .+..+.+++
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~-w~ig~~~~~ 77 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAF-WALGQINQF 77 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHH-HHhhhhhHH
Confidence 47889999999999999999765 77777765 788888877665544333222223444555555555 455667999
Q ss_pred HHhhccccccccc---------------------c----------------------cc-cCCCC-----ccchHHHHHH
Q 017782 197 QGLQRTSAGLGSA---------------------P----------------------AF-DESNS-----SLWGSGEWWM 227 (366)
Q Consensus 197 ~al~~~~~~~a~~---------------------P----------------------~~-~~~~~-----~~~~~G~l~a 227 (366)
.+.++++.+.+.. + .. .+++. ....+|.+++
T Consensus 78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~ 157 (290)
T TIGR00776 78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLL 157 (290)
T ss_pred HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHH
Confidence 9999999998832 0 00 11110 2236899999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH---HHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHH
Q 017782 228 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMV---IGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISY 304 (366)
Q Consensus 228 llaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~ 304 (366)
++++++|+.|.+..|+. ++++...++.+.. +++++..... ...+ +...+.+...+..|++ .++++
T Consensus 158 l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~Gi~-~~ia~ 225 (290)
T TIGR00776 158 LMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAK--------PLKKYAILLNILPGLM-WGIGN 225 (290)
T ss_pred HHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH-hccc--------chHHHHHHHHHHHHHH-HHHHH
Confidence 99999999999999986 4788777555444 3333322221 1011 1123344344448877 79999
Q ss_pred HHHHHHhc-cCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHH----HHHHHHHHHHHHhcccC
Q 017782 305 GVYFYSAT-KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQL----VGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 305 ~l~~~al~-~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~----vG~~lIl~g~~l~~~~~ 364 (366)
.+|..+.+ +.+++.++++.++||+.+.+++++++||+.+..|+ +|.++|+.|+.++...|
T Consensus 226 ~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~~ 290 (290)
T TIGR00776 226 FFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIGK 290 (290)
T ss_pred HHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhccC
Confidence 99999999 99999999999999999999999999999999999 99999999999876543
No 16
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.67 E-value=5.8e-14 Score=133.18 Aligned_cols=249 Identities=16% Similarity=0.088 Sum_probs=190.1
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHhhc-CcC-HHHHHHHHHHHHHHHHHHHHHHhCCCC---CCChhHHHHHHHHHHH
Q 017782 112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLP-KAG-TFFVAAFRLIPAGLLLITFASSQGRKL---PSGFNAWVSIFLFALV 186 (366)
Q Consensus 112 ~~~~~g~l~llla~~~~g~~~~~~k~~~~-~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~---~~~~~~~~~~~~~g~l 186 (366)
++.++..++.=..+++-..+......+.+ +.+ |....++-++.-.++..+....|+... ...+++|++.++++++
T Consensus 9 ~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~ 88 (334)
T PF06027_consen 9 RRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALL 88 (334)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHH
Confidence 34455666666666666777777776555 343 666677777776777777666654321 2234778888899999
Q ss_pred HHHHHHHHHHHHhhccccccccc------c------------------------------------cccC---CCCccch
Q 017782 187 DASCFQGFLAQGLQRTSAGLGSA------P------------------------------------AFDE---SNSSLWG 221 (366)
Q Consensus 187 ~~~~~~~~~~~al~~~~~~~a~~------P------------------------------------~~~~---~~~~~~~ 221 (366)
.....+ +.+.|++||+.+.+.+ | ...+ .+.+...
T Consensus 89 Dv~aN~-~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i 167 (334)
T PF06027_consen 89 DVEANY-LVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPI 167 (334)
T ss_pred HHHHHH-HHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccc
Confidence 876655 8999999999999888 2 0111 1234556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHH
Q 017782 222 SGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA 301 (366)
Q Consensus 222 ~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~ 301 (366)
+||+++++++++||+++++.++..++.+.....++..+++.++..+...+.+...+.. .+++...+..++..+ ++..
T Consensus 168 ~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~--~~w~~~~~~~~v~~~-~~lf 244 (334)
T PF06027_consen 168 LGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIES--IHWTSQVIGLLVGYA-LCLF 244 (334)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhc--cCCChhhHHHHHHHH-HHHH
Confidence 8999999999999999999999888899999999999999999888877766554432 233444444433333 5667
Q ss_pred HHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 302 ISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 302 l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
+-|.+....++..+|+...+-..+..+++++++++++|+++++..++|.++|+.|.+++...+
T Consensus 245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 788888999999999999999999999999999999999999999999999999999987654
No 17
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.65 E-value=1.6e-15 Score=120.75 Aligned_cols=137 Identities=20% Similarity=0.319 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 302 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l 302 (366)
-.++++++|+++++..+..|-..++.||...+..+.++..+.+..+.+..++... ....+.+.|..+...| +.+++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~---~~~~~~k~~lflilSG-la~gl 79 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQA---GGEIGPKSWLFLILSG-LAGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceec---ccccCcceehhhhHHH-HHHHH
Confidence 4689999999999999999998899999999999999999999988888766532 2345788899999888 77889
Q ss_pred HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
+..+|++|+|..+++.+.++.-+.|+++++++++++||+++..+++|+.+|+.|.+++.++
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~~ 140 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSLR 140 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEecC
Confidence 9999999999999999999999999999999999999999999999999999999887653
No 18
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.64 E-value=1.2e-13 Score=125.52 Aligned_cols=241 Identities=16% Similarity=0.162 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCC-----CCChhHHHHHHHHHHHHHH
Q 017782 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKL-----PSGFNAWVSIFLFALVDAS 189 (366)
Q Consensus 115 ~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~~~ 189 (366)
.+|+++.+.+-++||..+...| +++++++.++...|.+.+..+++..+...++.. .++++.+....+.+++ .+
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~k-ll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i~ 83 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFK-LLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-IG 83 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-HH
Confidence 5799999999999999999999 678999999999999999988877665544322 2334555555555554 57
Q ss_pred HHHHHHHHHhhccccccccc-----cc---------cc----------------CCCCccchHH--HHHHHHHHHHHHHH
Q 017782 190 CFQGFLAQGLQRTSAGLGSA-----PA---------FD----------------ESNSSLWGSG--EWWMLLAAQSMAVG 237 (366)
Q Consensus 190 ~~~~~~~~al~~~~~~~a~~-----P~---------~~----------------~~~~~~~~~G--~l~allaa~~~a~~ 237 (366)
.....|.+|..+-..-++++ |. +. +-....+..| -+.++.-+++|+.|
T Consensus 84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la~sf~~Y 163 (293)
T COG2962 84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALALSFGLY 163 (293)
T ss_pred HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 78889999999999999998 51 00 0000111111 25678889999999
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChh
Q 017782 238 TVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLT 317 (366)
Q Consensus 238 ~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~ 317 (366)
...-|++ ++|+.+-.+..++.-..+.+.+....++... .....+...+..++..|. .|.++..+|..|-|+++-+
T Consensus 164 gl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~--~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls 238 (293)
T COG2962 164 GLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQ--FLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLS 238 (293)
T ss_pred HHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCch--hhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHH
Confidence 9887776 6889999999999888888888776655531 112235667778888885 5678999999999999999
Q ss_pred hHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 318 KLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 318 ~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
..+.++|.||..-.+++++++||+++..+++.-++|..|..+...
T Consensus 239 ~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~ 283 (293)
T COG2962 239 TLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI 283 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988653
No 19
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.55 E-value=4.9e-14 Score=114.93 Aligned_cols=125 Identities=30% Similarity=0.560 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017782 232 QSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSA 311 (366)
Q Consensus 232 ~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al 311 (366)
++||.+.+..|+..++.|+...++++++.+.+ ..+.....+... ....+...+...++.+++++.+++.++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 75 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL 75 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence 46899999999998889999999999999998 666655544432 2466777888888899888899999999999
Q ss_pred ccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 312 TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 312 ~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
++.++++++++.+++|+++.++++++++|++++.+++|.++++.|++++.
T Consensus 76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998864
No 20
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.33 E-value=7.1e-11 Score=110.47 Aligned_cols=253 Identities=16% Similarity=0.097 Sum_probs=182.0
Q ss_pred hhhhhHHHHHHHHHHHHHHhhHHHHHHHhhcCcC---HHHHHHHHHHHHHHHHHHHH-------HHhCC--C--------
Q 017782 110 MELGMLLEWAVLVSPFFFWGTAMVAMKEVLPKAG---TFFVAAFRLIPAGLLLITFA-------SSQGR--K-------- 169 (366)
Q Consensus 110 ~~~~~~~g~l~llla~~~~g~~~~~~k~~~~~~~---p~~~~~~R~~~a~l~l~~~~-------~~~~~--~-------- 169 (366)
++.++..|+.++++..++|-.+.-+.+.+.++-+ |+.......-.-.+.+.++. ...+| +
T Consensus 8 ~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e 87 (416)
T KOG2765|consen 8 KRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEE 87 (416)
T ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhh
Confidence 4456788999999999999999999999988644 77766655433333333322 11001 0
Q ss_pred ---------------------------------------------------CC-CCh------------hHHHHHHHHHH
Q 017782 170 ---------------------------------------------------LP-SGF------------NAWVSIFLFAL 185 (366)
Q Consensus 170 ---------------------------------------------------~~-~~~------------~~~~~~~~~g~ 185 (366)
.+ +.+ +.....+..+.
T Consensus 88 ~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~ 167 (416)
T KOG2765|consen 88 ADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCP 167 (416)
T ss_pred hhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHH
Confidence 00 001 11233455566
Q ss_pred HHHHHHHHHHHHHhhccccccccc----------------c----------------------ccc------CCCCccch
Q 017782 186 VDASCFQGFLAQGLQRTSAGLGSA----------------P----------------------AFD------ESNSSLWG 221 (366)
Q Consensus 186 l~~~~~~~~~~~al~~~~~~~a~~----------------P----------------------~~~------~~~~~~~~ 221 (366)
+++. .+.++..||.+|+++..++ | ..+ ....+...
T Consensus 168 lWF~-anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~l 246 (416)
T KOG2765|consen 168 LWFL-ANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPL 246 (416)
T ss_pred HHHH-HHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchh
Confidence 6644 4458899999999988877 2 011 12334456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc----CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHH
Q 017782 222 SGEWWMLLAAQSMAVGTVMVRWVSK----YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSI 297 (366)
Q Consensus 222 ~G~l~allaa~~~a~~~v~~r~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv 297 (366)
.|+++++++|+.||+|.++.|+-.. ++|.-...++..++..+++++..++.+....+. ..-++..+...++..++
T Consensus 247 lG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~-F~lP~~~q~~~vv~~~l 325 (416)
T KOG2765|consen 247 LGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER-FELPSSTQFSLVVFNNL 325 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc-ccCCCCceeEeeeHhhH
Confidence 8999999999999999999998543 346666677777777777776555443322211 12334445566777889
Q ss_pred HHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 298 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 298 ~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
++++++-++|.+|.-..++..+++-+.++...+++...++-|.++++.+++|++.|++|.++++..+
T Consensus 326 igtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 326 IGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred HHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998765
No 21
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.22 E-value=4.7e-10 Score=105.19 Aligned_cols=133 Identities=16% Similarity=0.186 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhc-CCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782 224 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNH-DPVYGESVKELTSSDILALLYTSIFGSAI 302 (366)
Q Consensus 224 ~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~gv~~~~l 302 (366)
.++.+++++++|...+.+|+..++.++. ..+.....++...++..... ... +...+...|..++ .+.++...
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~ 75 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVG----WSRLPATFWLLLA-ISAVANMV 75 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCC----CCCcchhhHHHHH-HHHHHHHH
Confidence 4678999999999999999876665443 35555555656655554321 111 1223333444444 45466777
Q ss_pred HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
.+.++++++++.+++.++++.+++|+++++++++++||+++..+++|.++++.|++++..+
T Consensus 76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999987653
No 22
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.20 E-value=8.1e-10 Score=104.40 Aligned_cols=141 Identities=13% Similarity=0.205 Sum_probs=113.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 017782 219 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF 298 (366)
Q Consensus 219 ~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~ 298 (366)
...+|.+++++++++|+...+..|.. .+.++....+++.+++.+++.++.....+..... ....+...+... ..+.+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~ 81 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLK-TLIQTPQKIFML-AVSAV 81 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHH-HHHcCHHHHHHH-HHHHH
Confidence 44579999999999999999999876 5799999999999999887766654432210000 000133444333 35667
Q ss_pred HHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 299 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 299 ~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
+.++.+.++++++++.+++.++.+.++.|++.+++++++++|+++..+++|.++.+.|++++..
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~ 145 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW 145 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 7788999999999999999999999999999999999999999999999999999999998753
No 23
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.19 E-value=1e-08 Score=97.17 Aligned_cols=232 Identities=16% Similarity=0.112 Sum_probs=165.4
Q ss_pred HHHHHHHhhc--Cc--CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 017782 131 AMVAMKEVLP--KA--GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGL 206 (366)
Q Consensus 131 ~~~~~k~~~~--~~--~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~ 206 (366)
+.++.+.+.. .. .|..+.+..+....++..+.....+ ..+.++..+...+..+++. .+...+-+.++++++...
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~ 92 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPT 92 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHH
Confidence 3444444443 23 3889999999988887777665554 2222335566666777665 445558899999988766
Q ss_pred ccc-------c-------------------------------ccc-----CC---CCccchHHHHHHHHHHHHHHHHHHH
Q 017782 207 GSA-------P-------------------------------AFD-----ES---NSSLWGSGEWWMLLAAQSMAVGTVM 240 (366)
Q Consensus 207 a~~-------P-------------------------------~~~-----~~---~~~~~~~G~l~allaa~~~a~~~v~ 240 (366)
-.+ | ... .. .......|+.+.+++.++.+...+.
T Consensus 93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~ 172 (303)
T PF08449_consen 93 QIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVY 172 (303)
T ss_pred HHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 555 1 000 01 1111234999999999999999999
Q ss_pred HHHhhc--CCChHHHHHHHHHHHHHHHHHHHHH--hcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCh
Q 017782 241 VRWVSK--YSDPVMATGWHMVIGGLPLMVISVL--NHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSL 316 (366)
Q Consensus 241 ~r~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a 316 (366)
.+++.+ +.++...+++..+.+.+...+.... .++..-........+..+..++... ++..+++.+.++..++.++
T Consensus 173 qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-~~~~~g~~~i~~~~~~~~a 251 (303)
T PF08449_consen 173 QEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-LTGALGQFFIFYLIKKFSA 251 (303)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCc
Confidence 998754 3467888899999988888777666 3222111111122334455555555 5567788888899999999
Q ss_pred hhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 317 TKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 317 ~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
...+++..+.-+++++++++++|+++++.+|+|.++++.|+.+....|+
T Consensus 252 l~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~ 300 (303)
T PF08449_consen 252 LTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK 300 (303)
T ss_pred hhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999887664
No 24
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.16 E-value=9.9e-10 Score=101.50 Aligned_cols=139 Identities=17% Similarity=0.201 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcc-cccccCCHH-HHHHHHHHHHHH
Q 017782 222 SGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYG-ESVKELTSS-DILALLYTSIFG 299 (366)
Q Consensus 222 ~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ll~~gv~~ 299 (366)
+|.++.++++++|+...+..|.. .+.++.++.+++++++.+.+.++.....+.... ......+.. .+..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL- 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence 48899999999999999999985 569999999999999988876665443321000 000111222 23445555644
Q ss_pred HHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 300 SAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 300 ~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
.++.+.++++++++.+++.++.+.++.|++++++++++++|+++..+++|..+.+.|+.++..
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 667999999999999999999999999999999999999999999999999999999987643
No 25
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.98 E-value=2.2e-08 Score=96.88 Aligned_cols=136 Identities=16% Similarity=0.178 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRW-VSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA 301 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~ 301 (366)
-...+++.-++|+.+.++.|. +...+++....++++.+++++++++....+... .....+..+|..+...|+++ .
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~~~~~~~~~~l~l~g~~g-~ 89 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSR---SLPPLSVSILSKIGLLGFLG-S 89 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcchHHHHHHHHHHHHHH-H
Confidence 355667777889999999987 556789999999999999999888876543211 01233466777888888777 5
Q ss_pred HHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHH------hCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 302 ISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLY------LGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 302 l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~------lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
+.+.+++.++++.+++.++++.++.|++++++++++ ++|+++..+++|.++-++|+.++..
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 677789999999999999999999999999999999 6999999999999999999988664
No 26
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.97 E-value=2.5e-08 Score=84.49 Aligned_cols=139 Identities=18% Similarity=0.289 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-------CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccC-------CHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSK-------YSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKEL-------TSSD 288 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~ 288 (366)
|.++++++.++.+++.++.|++.+ +.++.....+....+.+.+.+..+..+.+......... +...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 678999999999999999988533 56889999999999999999988887766532221111 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 289 ILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 289 ~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
+..++..|++ ..+-....+..+++.+|...++...+.-+...+++++++||+++..+++|.++.+.|.+++++
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5555655644 455788888999999999999999999999999999999999999999999999999988753
No 27
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.96 E-value=4.8e-08 Score=92.11 Aligned_cols=132 Identities=18% Similarity=0.202 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHH
Q 017782 224 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS 303 (366)
Q Consensus 224 ~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~ 303 (366)
.+..++..+.|+...+..|....+.+|...+++++++++++++++....... ..+.++|......|++...+.
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~ 82 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHP-------LPTLRQWLNAALIGLLLLAVG 82 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCC-------CCcHHHHHHHHHHHHHHHHHH
Confidence 3456778899999999999877789999999999999998887776543221 124556777777887776778
Q ss_pred HHHHHHHh-ccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 304 YGVYFYSA-TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 304 ~~l~~~al-~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
+.+++.+. ++.+++.++++.++.|+++.+++++ ++|+++..+++|..+.+.|++++...
T Consensus 83 ~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~ 142 (292)
T PRK11272 83 NGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG 142 (292)
T ss_pred HHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence 88899998 9999999999999999999999986 79999999999999999999988643
No 28
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.90 E-value=5.8e-08 Score=79.97 Aligned_cols=121 Identities=17% Similarity=0.267 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 302 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l 302 (366)
|.++.+++.++-+...++.|+-.++.+....... . .. ..... .++ ...++.|++++++
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~----~~-~~~~~-------------~~p---~~~i~lgl~~~~l 60 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F----IA-ALLAF-------------GLA---LRAVLLGLAGYAL 60 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H----HH-HHHHH-------------hcc---HHHHHHHHHHHHH
Confidence 6788888888889999999886555433221111 0 00 00000 011 2245778899999
Q ss_pred HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHH--HhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFL--YLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l--~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
++.+|++++++.+.+.+.++..+.+++..+.++. ++||++++.+++|.++|++|++++.++++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999999888888885 89999999999999999999999987654
No 29
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.85 E-value=1.1e-07 Score=90.08 Aligned_cols=127 Identities=17% Similarity=0.221 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHH
Q 017782 224 EWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAIS 303 (366)
Q Consensus 224 ~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~ 303 (366)
.+++++++++|+...+..|...++.+|....++++.++++...++.. .+ ... +..++..|++.....
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~~~p~~~~~~R~~~a~~~l~~~~~---~~-------~~~---~~~~~~~g~~~~~~~ 72 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVA---RP-------KVP---LNLLLGYGLTISFGQ 72 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc---CC-------CCc---hHHHHHHHHHHHHHH
Confidence 46788999999999999998778899999999999988766544321 11 111 223333454444445
Q ss_pred HHHHHHHhcc-CChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 304 YGVYFYSATK-GSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 304 ~~l~~~al~~-~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
+.+++.++++ .+++.++.+.++.|+++.++++++++|+++..+++|.++.++|++++...
T Consensus 73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~ 133 (299)
T PRK11453 73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED 133 (299)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence 5677788887 68899999999999999999999999999999999999999999988754
No 30
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.85 E-value=2.8e-08 Score=80.14 Aligned_cols=106 Identities=17% Similarity=0.445 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHH
Q 017782 256 WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGF 335 (366)
Q Consensus 256 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~ 335 (366)
++.+...+....+....++.. ........+.+...+..|+++..+++.++++|+++.++ .++++..+.|+++.++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~ 79 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLR--DLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSW 79 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHH--HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHH
Confidence 455666666665555433221 01122223455566666777776899999999999994 888999999999999999
Q ss_pred HHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 336 LYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 336 l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
++++|+++..+++|.+++++|+.++...+
T Consensus 80 ~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 80 LFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999988764
No 31
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.82 E-value=8.5e-08 Score=88.49 Aligned_cols=119 Identities=16% Similarity=0.176 Sum_probs=97.7
Q ss_pred HHHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 017782 234 MAVGTVMVRWVS-KYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSAT 312 (366)
Q Consensus 234 ~a~~~v~~r~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~ 312 (366)
|+...+..|... ...|+.....++.+.+.+.+.+..... .+..++...+..|.++..+.+.+++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~ 69 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----------PPLKRLLRLLLLGALQIGVFYVLYFVAVK 69 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----------cCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777754 457888888888888877776654321 23456666777787888889999999999
Q ss_pred cCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 313 KGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 313 ~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
+.+++.++++..++|++++++++++++|++++.+++|..+.+.|+.++...
T Consensus 70 ~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~ 120 (260)
T TIGR00950 70 RLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSD 120 (260)
T ss_pred hcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccC
Confidence 999999999999999999999999999999999999999999999887643
No 32
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.79 E-value=1.6e-07 Score=88.65 Aligned_cols=131 Identities=18% Similarity=0.133 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHH
Q 017782 222 SGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA 301 (366)
Q Consensus 222 ~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~ 301 (366)
++.++++++.++|+...+..|...+..+|....++++.++++++.++. ..+.. .. ..+..++ .+.+...
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~----~~---~~~~~~~-~~~l~~~ 72 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTV---GFPRL----RQ---FPKRYLL-AGGLLFV 72 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHc---ccccc----cc---ccHHHHH-HHhHHHH
Confidence 367889999999999999999988899999999999999988876542 11110 11 1122222 2334444
Q ss_pred HHHHHHHHHh----ccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 302 ISYGVYFYSA----TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 302 l~~~l~~~al----~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
+.+.+++.++ +..++..++.+.++.|++++++++++++|+++..+++|..+.+.|++++...
T Consensus 73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~ 138 (295)
T PRK11689 73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG 138 (295)
T ss_pred HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence 4555555555 4568889999999999999999999999999999999999999999887654
No 33
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.72 E-value=2.5e-07 Score=74.35 Aligned_cols=68 Identities=10% Similarity=0.128 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 295 TSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 295 ~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
.++++.++++.++.+++++.+.+++.++.++.++++.+++++++||++++.+++|.++|++|+.++..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34467788999999999999999999999999999999999999999999999999999999988764
No 34
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=98.68 E-value=4.3e-07 Score=85.56 Aligned_cols=234 Identities=11% Similarity=0.056 Sum_probs=167.6
Q ss_pred hhHHHHHHHhhc--Cc-CHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--ChhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 017782 129 GTAMVAMKEVLP--KA-GTFFVAAFRLIPAGLLLITFASSQGRKLPS--GFNAWVSIFLFALVDASCFQGFLAQGLQRTS 203 (366)
Q Consensus 129 g~~~~~~k~~~~--~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~--~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~ 203 (366)
.......|+.++ +. -|..+..+.+..+.+.+......+..+.+. .+..+...+-+|++. +....+-..++.+.+
T Consensus 30 v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~ 108 (316)
T KOG1441|consen 30 VGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVP 108 (316)
T ss_pred eeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccc
Confidence 344456787777 43 388888888877777776665555443332 335677777777765 445557788888888
Q ss_pred cccccc-----c-------------------------cc------cCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhc-
Q 017782 204 AGLGSA-----P-------------------------AF------DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK- 246 (366)
Q Consensus 204 ~~~a~~-----P-------------------------~~------~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~- 246 (366)
++.... | .. ...+.+....|.+.++.+.+..++..++.|++.+
T Consensus 109 VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~ 188 (316)
T KOG1441|consen 109 VSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTS 188 (316)
T ss_pred hhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 887766 2 11 1233445667999999999999999999998653
Q ss_pred ---CCChHHHHHHHHHHHHHHHH-HHHHHhcCCCccc-ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHH
Q 017782 247 ---YSDPVMATGWHMVIGGLPLM-VISVLNHDPVYGE-SVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSS 321 (366)
Q Consensus 247 ---~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~ 321 (366)
+.|+...+.+..-.+.+.++ |+....++..... .....+...+ .+++.. ++...-+..-+..+.+.+|..-++
T Consensus 189 ~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V 266 (316)
T KOG1441|consen 189 KGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFL-ILLLNS-VLAFLLNLSAFLVIGRTSALTYSV 266 (316)
T ss_pred cccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhH-HHHHHH-HHHHHHHHHHHHHHcccCchhhhh
Confidence 47889999998888888888 7665544443200 0012222222 233333 444545667778899999999999
Q ss_pred hhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 322 LTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 322 ~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
...+--++.++.+++++++++++.+..|.++.++|++++.+.|.
T Consensus 267 ~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~ 310 (316)
T KOG1441|consen 267 AGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL 310 (316)
T ss_pred hccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999987653
No 35
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.62 E-value=1.4e-06 Score=82.52 Aligned_cols=119 Identities=16% Similarity=0.181 Sum_probs=95.6
Q ss_pred HHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCh
Q 017782 238 TVMVRWVSKY-SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSL 316 (366)
Q Consensus 238 ~v~~r~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a 316 (366)
++++|...+. ..|...+++++.++.+...+.. ..+... ....+.++|..++..|++. .+.+.+.++++++.++
T Consensus 18 ~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~ 91 (302)
T TIGR00817 18 NIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPK----RLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAV 91 (302)
T ss_pred HHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCC----CCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccH
Confidence 3567777666 5688888999888877655441 111111 1345677888888889774 7789999999999999
Q ss_pred hhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 317 TKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 317 ~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
+..+++..+.|++++++++++++|+++..+++|.+++++|+.+...
T Consensus 92 s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~ 137 (302)
T TIGR00817 92 SFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASD 137 (302)
T ss_pred HHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcC
Confidence 9999999999999999999999999999999999999999987643
No 36
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.61 E-value=9.5e-07 Score=80.89 Aligned_cols=140 Identities=14% Similarity=0.192 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHH
Q 017782 221 GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS 300 (366)
Q Consensus 221 ~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~ 300 (366)
..|.++++.+-+.|+.--...|-+ +..++..+..++.+.+......+.....+...... ..-+++.+......++..
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~li- 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTALLI- 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHHHH-
Confidence 459999999999999999999887 57899999999999999888877666544422111 123456677777677554
Q ss_pred HHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 301 AISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 301 ~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
...+.+|.+|.+.....++|.-.++.|.+.+++|.++++|+++..|++..++..+|+....+.
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 448999999999999999999999999999999999999999999999999999999876653
No 37
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.57 E-value=3.4e-06 Score=81.61 Aligned_cols=122 Identities=11% Similarity=0.062 Sum_probs=96.3
Q ss_pred HHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccC--CHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017782 235 AVGTVMVRWVSKYSD-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKEL--TSSDILALLYTSIFGSAISYGVYFYSA 311 (366)
Q Consensus 235 a~~~v~~r~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ll~~gv~~~~l~~~l~~~al 311 (366)
..+.+..|.+.+..+ |...+.++++++.+.+.+... .+.... ... ....|..++.+|++... .+...+.++
T Consensus 62 ~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~----~~~~~~~~~~~~llp~gl~~~~-~~~~~~~sl 135 (350)
T PTZ00343 62 VLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWA-TGFRKI----PRIKSLKLFLKNFLPQGLCHLF-VHFGAVISM 135 (350)
T ss_pred HHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCC----CCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 444566788878889 999999999999876554432 211110 111 23467777778866654 577788999
Q ss_pred ccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 312 TKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 312 ~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
++.+++.++++..++|++++++++++++|+++..+++|.+++++|+.+...
T Consensus 136 ~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 136 GLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred hhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 999999999999999999999999999999999999999999999998764
No 38
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.47 E-value=8.1e-06 Score=75.91 Aligned_cols=139 Identities=21% Similarity=0.315 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHH
Q 017782 221 GSGEWWMLLAAQSMAVGTVMVRWVSKY-SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFG 299 (366)
Q Consensus 221 ~~G~l~allaa~~~a~~~v~~r~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~ 299 (366)
..+....++.++.|+......|..... .+.......+...+.+...+......... ......+...+..+.+.
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 79 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGL------RPALRPWLLLLLLALLG 79 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccc------cccccchHHHHHHHHHH
Confidence 357788888889999999999887665 55555666677777766332322211001 11111144455566678
Q ss_pred HHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHH-HHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 300 SAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGF-LYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 300 ~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~-l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
....+.+++.++++.+++.++.+.++.|++..++++ ++++|+++..++.|..+.+.|++++..++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~ 146 (292)
T COG0697 80 LALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG 146 (292)
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence 888999999999999999999999999999999997 777999999999999999999999887653
No 39
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.47 E-value=2e-07 Score=83.29 Aligned_cols=224 Identities=17% Similarity=0.146 Sum_probs=164.4
Q ss_pred hhHHHHHHHhhcCc-CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 017782 129 GTAMVAMKEVLPKA-GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLG 207 (366)
Q Consensus 129 g~~~~~~k~~~~~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a 207 (366)
++...-...+-.++ -|....|..+..-+++..|++.+|++-. +..|+..++++++..-..+ +...|.|||+...+
T Consensus 32 ~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~---~~~~~hYilla~~DVEaNy-~vV~AyQyTsmtSi 107 (336)
T KOG2766|consen 32 STAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYI---KAKWRHYILLAFVDVEANY-FVVKAYQYTSMTSI 107 (336)
T ss_pred cchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHH---HHHHHHhhheeEEeecccE-EEeeehhhcchHHH
Confidence 33333333333334 3788899999999999999998877332 3566677888877765544 56778888887777
Q ss_pred cc------c--------------------------------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHH
Q 017782 208 SA------P--------------------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRW 243 (366)
Q Consensus 208 ~~------P--------------------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~ 243 (366)
.+ | ..+..+++...+||.+.+++|-+||+.++.-..
T Consensus 108 ~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEf 187 (336)
T KOG2766|consen 108 MLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEF 187 (336)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHH
Confidence 66 2 223345667778999999999999999999999
Q ss_pred hhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHH-HHHHHHHHHHHHHHHhccCChhhHHHh
Q 017782 244 VSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYT-SIFGSAISYGVYFYSATKGSLTKLSSL 322 (366)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-gv~~~~l~~~l~~~al~~~~a~~~s~~ 322 (366)
+.|+.|....+....++|+++..+- ++.+.... ....+. |....++ ..++.++-|.+.-.-+|.-+++...+-
T Consensus 188 lvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~----~tl~w~-~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nls 261 (336)
T KOG2766|consen 188 LVKNADRVELMGFLGLFGAIISAIQ-FIFERHHV----STLHWD-SAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLS 261 (336)
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHH-Hhhhccce----eeEeeh-HHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhh
Confidence 9999999999999999999999888 44433321 122221 2222222 335556667777778899999999998
Q ss_pred hhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 323 TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 323 ~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
..+.-.|+.++ ..||-+.+|..++..+.+..|.+++.-++
T Consensus 262 lLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re 301 (336)
T KOG2766|consen 262 LLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE 301 (336)
T ss_pred HhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence 89999999988 66788899999999999999998876543
No 40
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.42 E-value=5.3e-06 Score=78.19 Aligned_cols=132 Identities=16% Similarity=0.095 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 302 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l 302 (366)
|.+++++++++|+...+..|+.. ..++.+.. .+.++.++...+......+. ......+..-+..| +.-.+
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~------~~~~~~~~~g~l~G-~~w~i 71 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPE------FWALSIFLVGLLSG-AFWAL 71 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCc------ccccHHHHHHHHHH-HHHHh
Confidence 57899999999999999999975 55555554 35555555554444333221 11233333333334 33677
Q ss_pred HHHHHHHHhccCChhhHHHhhh-hHHHHHHHHHHHHhCCCCChhH----HHHHHHHHHHHHHhcccC
Q 017782 303 SYGVYFYSATKGSLTKLSSLTF-LTPMFASIFGFLYLGETFSPLQ----LVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~-l~Pv~a~i~~~l~lgE~~~~~~----~vG~~lIl~g~~l~~~~~ 364 (366)
++.+|..++|+.+.+.+-++.+ +++++..+++.+++||+.+..+ ++|.++++.|++++...+
T Consensus 72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence 8999999999999999999999 8999999999999999999999 999999999999876543
No 41
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.33 E-value=5.7e-06 Score=66.58 Aligned_cols=92 Identities=16% Similarity=0.143 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---ChhHHHHHHHHHHHHHHHHHH
Q 017782 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPS---GFNAWVSIFLFALVDASCFQG 193 (366)
Q Consensus 117 g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~---~~~~~~~~~~~g~l~~~~~~~ 193 (366)
..++.+++++++|...++.|...+++||....+.|.++..+.+..++...++.... ++|.|..+.+.|+. .+....
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla-~glswl 82 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLA-GGLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHH-HHHHHH
Confidence 46789999999999999999999999999999999999999998888887765544 67888888888865 567777
Q ss_pred HHHHHhhccccccccc
Q 017782 194 FLAQGLQRTSAGLGSA 209 (366)
Q Consensus 194 ~~~~al~~~~~~~a~~ 209 (366)
+||.|++...++.++.
T Consensus 83 ~Yf~ALk~G~as~VvP 98 (140)
T COG2510 83 LYFRALKKGKASRVVP 98 (140)
T ss_pred HHHHHHhcCCcceEEE
Confidence 9999999988876654
No 42
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.31 E-value=0.00021 Score=65.85 Aligned_cols=174 Identities=14% Similarity=0.111 Sum_probs=122.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc---------------------c----------------------
Q 017782 174 FNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA---------------------P---------------------- 210 (366)
Q Consensus 174 ~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a~~---------------------P---------------------- 210 (366)
.+.+...++.|++. ...+..++.+.++..++.+.. +
T Consensus 42 ~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lt 120 (269)
T PF06800_consen 42 GTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILT 120 (269)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 36677777777776 455668898998888877655 0
Q ss_pred cccC------CCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccC
Q 017782 211 AFDE------SNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKEL 284 (366)
Q Consensus 211 ~~~~------~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 284 (366)
...+ ++.....+|.+..+.+.+.|-.|.+..|.. +.|+.....-+.+.-.+...++....... ..
T Consensus 121 s~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~~~~~~lPqaiGm~i~a~i~~~~~~~~-------~~ 191 (269)
T PF06800_consen 121 SYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVSGWSAFLPQAIGMLIGAFIFNLFSKKP-------FF 191 (269)
T ss_pred ccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCChhHhHHHHHHHHHHHHHHHhhccccc-------cc
Confidence 0111 112345679999999999999999998874 56777766655544444444444333222 11
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChh----HHHHHHHHHHHHHH
Q 017782 285 TSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPL----QLVGAAVTVVAIYL 359 (366)
Q Consensus 285 ~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~----~~vG~~lIl~g~~l 359 (366)
+...|..+ ..| +.-.++..++..+.+..+.+..=.+.-+.++++.+.|.+++||+=+.. .++|.++|+.|.++
T Consensus 192 ~k~~~~ni-l~G-~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 192 EKKSWKNI-LTG-LIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred ccchHHhh-HHH-HHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 22234333 345 445678999999999999999999999999999999999999997754 56788888887764
No 43
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.27 E-value=6.8e-05 Score=69.09 Aligned_cols=216 Identities=12% Similarity=0.044 Sum_probs=156.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-------c-----
Q 017782 143 GTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA-------P----- 210 (366)
Q Consensus 143 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a~~-------P----- 210 (366)
++..+.+..-+.+.++-..++..+.+. ...++.|......++.+..... |.|.|++|.+=-...+ |
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~-~~~~apl~~y~~is~tn~~s~~-~~yeaLKyvSyPtq~LaKscKmIPVmlmg 127 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE-LSGVAPLYKYSLISFTNTLSSW-CGYEALKYVSYPTQTLAKSCKMIPVMLMG 127 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc-CCCCCchhHHhHHHHHhhcchH-HHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence 477788888888877775555444333 3445677777788887655555 8999999988544444 2
Q ss_pred --------------------------ccc-------CCCCccchHHHHHHHHHHHHHHHHHHHHHHhhc--CCChHHHHH
Q 017782 211 --------------------------AFD-------ESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVMATG 255 (366)
Q Consensus 211 --------------------------~~~-------~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~--~~~~~~~~~ 255 (366)
.+. ..+.....+|..+....-++=+.......++-+ ++++..+++
T Consensus 128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~ 207 (327)
T KOG1581|consen 128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF 207 (327)
T ss_pred HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence 011 111123456888888888888888888777654 356788888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHH
Q 017782 256 WHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGF 335 (366)
Q Consensus 256 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~ 335 (366)
+.-+++.+.........+...-.-.....+++.+.-++... ++..++|.+.++-+++.++-+.+.++.+.=+++++++.
T Consensus 208 ~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s-~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~ 286 (327)
T KOG1581|consen 208 GVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS-TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSC 286 (327)
T ss_pred HHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH-HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHH
Confidence 88888888777663332222111122344566677777777 44566999999999999999999999999999999999
Q ss_pred HHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 336 LYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 336 l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
+.+|.++++.|++|..+|++|+.+-.
T Consensus 287 i~f~h~~s~~q~~g~~iVFg~i~l~~ 312 (327)
T KOG1581|consen 287 IVFGHPLSSEQWLGVLIVFGGIFLEI 312 (327)
T ss_pred HHhCCccchhhccCeeeehHHHHHHH
Confidence 99999999999999999999998754
No 44
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.23 E-value=4.8e-05 Score=71.72 Aligned_cols=126 Identities=16% Similarity=0.198 Sum_probs=99.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHH
Q 017782 221 GSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS 300 (366)
Q Consensus 221 ~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~ 300 (366)
..|..+.+++.++|+......|...++.++....++++++++++++++..... ...+.++|...+..|++ .
T Consensus 11 ~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~~~--------~~~~~~~~~~~~~~g~~-~ 81 (293)
T PRK10532 11 WLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKPWR--------LRFAKEQRLPLLFYGVS-L 81 (293)
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhHHh--------ccCCHHHHHHHHHHHHH-H
Confidence 45899999999999999999999888899999999999999988776542211 12345666666667754 5
Q ss_pred HHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 301 AISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 301 ~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
++.+.++++++++.+++.++.+.++.|+++++++ +|++.. ..+.++.+.|++++.
T Consensus 82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~ 136 (293)
T PRK10532 82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLL 136 (293)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheee
Confidence 6678889999999999999999999999999887 366654 455667788887764
No 45
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=98.21 E-value=0.00092 Score=61.34 Aligned_cols=223 Identities=14% Similarity=0.077 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHH---HHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHH
Q 017782 114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRL---IPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASC 190 (366)
Q Consensus 114 ~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~---~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 190 (366)
..+..+.+.+.++++.....+.-..+..+||...-..|- ++.+++...++ +|+ ..+.+|..+++..+ +..
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L---~r~--ls~~qW~aL~lL~~-Gv~- 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLL---KRR--LSRRQWLALFLLVA-GVV- 85 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHH---Hcc--cchhhHHHHHHHHH-HHh-
Confidence 456678888999999999999999999999887776664 33333333332 222 23356655544322 111
Q ss_pred HHHHHHHHhhccccccccc-ccc-cCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHHHHHH
Q 017782 191 FQGFLAQGLQRTSAGLGSA-PAF-DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD--PVMATGWHMVIGGLPLM 266 (366)
Q Consensus 191 ~~~~~~~al~~~~~~~a~~-P~~-~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~--~~~~~~~~~~~~~v~~~ 266 (366)
..........+..- ... ..........|.++.++++++-++..+..+|+.|+.+ .........+.+.+..+
T Consensus 86 -----lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~ 160 (244)
T PF04142_consen 86 -----LVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNL 160 (244)
T ss_pred -----eeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Confidence 11111111100000 000 0112334567999999999999999999999876653 33344444555555555
Q ss_pred HHHHHhcCCCcc--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCCh
Q 017782 267 VISVLNHDPVYG--ESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSP 344 (366)
Q Consensus 267 ~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~ 344 (366)
+.....+..... +.....+...|..+ +...++=.+....+|+.+...=........+++.+++++++|.+++.
T Consensus 161 ~~~~~~~~~~~~~~g~f~G~~~~~~~~i-----~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~ 235 (244)
T PF04142_consen 161 LALLLSDGSAISESGFFHGYSWWVWIVI-----FLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSL 235 (244)
T ss_pred HHHhcccccccccCCchhhcchHHHHHH-----HHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 554433221111 11122233333333 33444555667788999999888899999999999999999999999
Q ss_pred hHHHHHHHH
Q 017782 345 LQLVGAAVT 353 (366)
Q Consensus 345 ~~~vG~~lI 353 (366)
..++|+.+|
T Consensus 236 ~f~lg~~~V 244 (244)
T PF04142_consen 236 SFLLGAALV 244 (244)
T ss_pred HHhhheecC
Confidence 999998764
No 46
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.15 E-value=6.8e-05 Score=66.59 Aligned_cols=144 Identities=12% Similarity=0.079 Sum_probs=105.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHHHHHHHHHHHhcCCCcc-cccccCCHHHHHH
Q 017782 215 SNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD--PVMATGWHMVIGGLPLMVISVLNHDPVYG-ESVKELTSSDILA 291 (366)
Q Consensus 215 ~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 291 (366)
........|.++.+++-..=++......++++.+. ....+.+.-+.+.+.+....++.++. |+ .....-.+..|+-
T Consensus 165 ~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGEl-weF~yF~~RhP~~~~~ 243 (337)
T KOG1580|consen 165 AEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGEL-WEFFYFVQRHPYVFWD 243 (337)
T ss_pred CcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhH-HHHHHHHHhccHHHHH
Confidence 34455667999999998888888888877765543 23444555555554444333333221 10 0112224556667
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHh
Q 017782 292 LLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 360 (366)
Q Consensus 292 ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~ 360 (366)
+..++ +++.+++++.+.-+...+|-.-+++..+.-.|+++.++++++.+++..||+|..+|..|...=
T Consensus 244 l~l~a-i~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 244 LTLLA-IASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHH-HHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 77777 677899999999999999999999999999999999999999999999999999999998763
No 47
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.09 E-value=1.1e-05 Score=65.24 Aligned_cols=83 Identities=23% Similarity=0.341 Sum_probs=68.6
Q ss_pred HHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCC--CCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 017782 126 FFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRK--LPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTS 203 (366)
Q Consensus 126 ~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~ 203 (366)
++||...++.|...++.||....++|+.++.+ ++++....+++ ...+.+++...+..++++....+.++++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 79 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS 79 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence 47999999999999999999999999999997 55555544432 3455677888888888877888889999999999
Q ss_pred cccccc
Q 017782 204 AGLGSA 209 (366)
Q Consensus 204 ~~~a~~ 209 (366)
++.+++
T Consensus 80 ~~~~~~ 85 (126)
T PF00892_consen 80 ASIVSI 85 (126)
T ss_pred hhHHHH
Confidence 988776
No 48
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.99 E-value=9.1e-07 Score=79.71 Aligned_cols=137 Identities=18% Similarity=0.278 Sum_probs=103.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 017782 219 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF 298 (366)
Q Consensus 219 ~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~ 298 (366)
..++|.++.-++ .++...+++.+++. ..||......++++-.++..+...+...+.+ .+.+-.-|+ +.=|+.
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~-e~~p~e~a~~r~l~~mlit~pcliy~~~~v~----gp~g~R~~L--iLRg~m 106 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVL-ENDPMELASFRLLVRMLITYPCLIYYMQPVI----GPEGKRKWL--ILRGFM 106 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhh-ccChhHhhhhhhhhehhhhheEEEEEeeeee----cCCCcEEEE--Eeehhh
Confidence 445688888888 88889999998875 4677777777765555555554444333321 122222332 224544
Q ss_pred HHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 299 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 299 ~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
++. +..+.+|++++.+.+.+..+.++.|+++++++|++++|+.+....+|..+.+.|++++.++.
T Consensus 107 G~t-gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 107 GFT-GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhh-HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 444 77888999999999999999999999999999999999999999999999999999988764
No 49
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.97 E-value=0.0057 Score=58.65 Aligned_cols=247 Identities=13% Similarity=0.035 Sum_probs=143.3
Q ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHh--CCC-----CCCChhHHHHHHHHHH
Q 017782 113 GMLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ--GRK-----LPSGFNAWVSIFLFAL 185 (366)
Q Consensus 113 ~~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~--~~~-----~~~~~~~~~~~~~~g~ 185 (366)
+...|++..++++++||+.++-.|. .+.- .++..+.=..+-.-++.|+..-. -+. ...+.+.+...++.|+
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w-~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~ 81 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW-SWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA 81 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCC-chhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence 3467999999999999999999996 4432 22222111111111222211110 011 1124467777788888
Q ss_pred HHHHHHHHHHHHHhhccccccccc-------------c---------------------------------cc----cC-
Q 017782 186 VDASCFQGFLAQGLQRTSAGLGSA-------------P---------------------------------AF----DE- 214 (366)
Q Consensus 186 l~~~~~~~~~~~al~~~~~~~a~~-------------P---------------------------------~~----~~- 214 (366)
+... .+..++.++++...+.+.. | .. .+
T Consensus 82 ~W~i-G~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~ 160 (345)
T PRK13499 82 LWGI-GGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER 160 (345)
T ss_pred HHHh-hhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Confidence 7644 5558899999988777654 1 00 11
Q ss_pred ------CCCccchHHHHHHHHHHHHHHHHH-------HHHHHh-hcCCChHHHHHHHHH---HHHHHHH-HHHHHh--cC
Q 017782 215 ------SNSSLWGSGEWWMLLAAQSMAVGT-------VMVRWV-SKYSDPVMATGWHMV---IGGLPLM-VISVLN--HD 274 (366)
Q Consensus 215 ------~~~~~~~~G~l~allaa~~~a~~~-------v~~r~~-~~~~~~~~~~~~~~~---~~~v~~~-~~~~~~--~~ 274 (366)
.+.....+|.++++++.+.++.|. ...+.- ..+.++.....-+.+ +++++.- ++.... ..
T Consensus 161 ~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~ 240 (345)
T PRK13499 161 KMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKN 240 (345)
T ss_pred ccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 122456789999999999999999 443331 123454443333333 4443333 222211 11
Q ss_pred CCcccc-cccCC----HHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHH---h-hhhHHHHHHHHHHHHhCCCCC--
Q 017782 275 PVYGES-VKELT----SSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSS---L-TFLTPMFASIFGFLYLGETFS-- 343 (366)
Q Consensus 275 ~~~~~~-~~~~~----~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~---~-~~l~Pv~a~i~~~l~lgE~~~-- 343 (366)
..+... ....+ ..+...-+..| +.-.++..+|..+..+.+.+.... + +.+..+++.+.|. +++|+=+
T Consensus 241 ~~~~~~~~~~~~~~~~~~n~l~~~l~G-~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~ 318 (345)
T PRK13499 241 KDLSLKADFSLAKPLLITNVLLSALAG-VMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGAS 318 (345)
T ss_pred CCcccchhccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCC
Confidence 111000 01111 22222223344 445667888888888775554433 3 3777799999998 5999876
Q ss_pred ----hhHHHHHHHHHHHHHHhcccC
Q 017782 344 ----PLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 344 ----~~~~vG~~lIl~g~~l~~~~~ 364 (366)
...++|.+++++|..++...+
T Consensus 319 ~k~~~~l~~G~vliI~g~~lig~~~ 343 (345)
T PRK13499 319 RRPVRVLSLGCVVIILAANIVGLGN 343 (345)
T ss_pred ccchhHHHHHHHHHHHHHHHHhhcc
Confidence 567999999999999887654
No 50
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.95 E-value=0.00023 Score=68.04 Aligned_cols=136 Identities=12% Similarity=0.133 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 302 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l 302 (366)
|-.+++.-+........+.++ .-..|. ..+++.++.-.++..+......... .+...-...|+.-+.+++ .-..
T Consensus 18 gQ~lsl~~~~t~~~s~~l~~~-~~~~P~-~Qs~~~Y~~l~~vy~~~~~~r~~~~---~~~~~~~~~~w~y~lla~-~Dv~ 91 (334)
T PF06027_consen 18 GQVLSLCITGTGTFSSLLANK-GVNIPT-FQSFFNYVLLALVYTPILLYRRGFK---KWLKVLKRPWWKYFLLAL-LDVE 91 (334)
T ss_pred HHHHHHHHHhHHHHHHHHHhc-CccCcH-HHHHHHHHHHHHHHhhhhhhccccc---cchhhcchhHHHHHHHHH-HHHH
Confidence 444444444444444444444 223344 4444444443333333333322211 111222334444444674 4567
Q ss_pred HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
+.++.+.|+++.+.+.++++.....++++++++++++++.++.+++|+.+.++|+.++...+
T Consensus 92 aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 92 ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 99999999999999999999999999999999999999999999999999999998876653
No 51
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.88 E-value=0.00014 Score=58.10 Aligned_cols=69 Identities=9% Similarity=0.176 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHhccCChhhHHHh-hhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 296 SIFGSAISYGVYFYSATKGSLTKLSSL-TFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 296 gv~~~~l~~~l~~~al~~~~a~~~s~~-~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
.+++.+++++++..++|+.|.+.+=.+ ..+.-+.+.+++++++||++++.+++|.++|+.|++.++..+
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 345667799999999999999988666 557888999999999999999999999999999999987643
No 52
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.87 E-value=0.00012 Score=59.39 Aligned_cols=69 Identities=20% Similarity=0.284 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHhccCChhhHHHhh-hhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 296 SIFGSAISYGVYFYSATKGSLTKLSSLT-FLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 296 gv~~~~l~~~l~~~al~~~~a~~~s~~~-~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
.+++.+++++++.+++|+++.+.+=.+- .+.-+.+.+.+++++||++++.+++|.++|++|++.++...
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 4456677999999999999999887764 68899999999999999999999999999999999987643
No 53
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.73 E-value=0.0011 Score=55.35 Aligned_cols=131 Identities=16% Similarity=0.163 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSKYSD-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSA 301 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~ 301 (366)
..++++++..+-++...++.++.++.. +.....+....+.+.+.++....++... ......+|+..+ -|++ ..
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~----~~~~~~p~w~~l-GG~l-G~ 75 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSL----ASLSSVPWWAYL-GGLL-GV 75 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccccc----chhccCChHHhc-cHHH-HH
Confidence 367899999999999999999888776 9999999999999999888877766522 222222343333 3444 45
Q ss_pred HHHHHHHHHhccCChhhHHHhhhh-HHHHHHHHHHH----HhCCCCChhHHHHHHHHHHHHHH
Q 017782 302 ISYGVYFYSATKGSLTKLSSLTFL-TPMFASIFGFL----YLGETFSPLQLVGAAVTVVAIYL 359 (366)
Q Consensus 302 l~~~l~~~al~~~~a~~~s~~~~l-~Pv~a~i~~~l----~lgE~~~~~~~vG~~lIl~g~~l 359 (366)
+-..+..+.+++++++....+... |.+.+++++.+ .-.+++++..++|.++++.|+++
T Consensus 76 ~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 76 FFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 567778888999998887776655 88888888886 23467899999999999999864
No 54
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.70 E-value=0.00035 Score=54.91 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHhccCChhhH-HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 298 FGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 298 ~~~~l~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
++..+++++...++|+++.+.+ ++-.-.-.+.+.+.|+++|||+++..+++|.+++++|++..+...
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 4456799999999999998876 566677888999999999999999999999999999999987654
No 55
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=97.65 E-value=0.00032 Score=63.28 Aligned_cols=61 Identities=15% Similarity=0.036 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHH
Q 017782 299 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYL 359 (366)
Q Consensus 299 ~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l 359 (366)
...+++.+..+.+|+.++...+....++++++.+++++++||+++..+++|+.+|+.|+++
T Consensus 161 ~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 161 LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3455778899999999999999999999999999999999999999999999999999765
No 56
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.65 E-value=0.0015 Score=52.09 Aligned_cols=65 Identities=6% Similarity=0.114 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHhccCChhhH-HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 298 FGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 298 ~~~~l~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
++..+++++...++|++|.+.+ ++...+.-+.+.+.+++++||++++.+++|.++|+.|++..+.
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lkl 108 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIKL 108 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 4567799999999999999877 4445578889999999999999999999999999999998753
No 57
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.059 Score=51.22 Aligned_cols=242 Identities=12% Similarity=-0.004 Sum_probs=154.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhc-C---cCHHHHHHHHHHHHHHHHHHHHHHhCCC----CCC--------ChhHHHH
Q 017782 116 LEWAVLVSPFFFWGTAMVAMKEVLP-K---AGTFFVAAFRLIPAGLLLITFASSQGRK----LPS--------GFNAWVS 179 (366)
Q Consensus 116 ~g~l~llla~~~~g~~~~~~k~~~~-~---~~p~~~~~~R~~~a~l~l~~~~~~~~~~----~~~--------~~~~~~~ 179 (366)
.-++.++...+.++......|+.-. + ..|....++--++-.++.+.+++...++ ..+ .++...+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 4577778888899999999997654 3 5677777777666666665555554211 110 1122233
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccc-----------------------------------------ccc------
Q 017782 180 IFLFALVDASCFQGFLAQGLQRTSAGLGSA-----------------------------------------PAF------ 212 (366)
Q Consensus 180 ~~~~g~l~~~~~~~~~~~al~~~~~~~a~~-----------------------------------------P~~------ 212 (366)
..+-+++ ++..+-++|.++.+.+++...+ |..
T Consensus 95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~ 173 (345)
T KOG2234|consen 95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK 173 (345)
T ss_pred HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence 3333333 4555568999999999887777 101
Q ss_pred cCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHHHHHHHHHHHhcCCC--cccccccCCHHH
Q 017782 213 DESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSD--PVMATGWHMVIGGLPLMVISVLNHDPV--YGESVKELTSSD 288 (366)
Q Consensus 213 ~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~ 288 (366)
++...+....|....+++++.-+...+...|+.|+-+ ......-...+|.++.++..+..+... +.+.....+...
T Consensus 174 ~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~v 253 (345)
T KOG2234|consen 174 SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIV 253 (345)
T ss_pred CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHH
Confidence 1222445567999999999999999999999876543 222333334455554444433322211 122233445556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 289 ILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 289 ~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
|..++..++- =.+...-+|+.+-..=.-...+..+++.+.++.+++-+|+...++|+.+|+.++.++...
T Consensus 254 w~vVl~~a~g-----GLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~ 323 (345)
T KOG2234|consen 254 WLVVLLNAVG-----GLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLY 323 (345)
T ss_pred HHHHHHHhcc-----chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcC
Confidence 6666655533 333444556666655555666777899999999999999999999999999999998743
No 58
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.64 E-value=0.00063 Score=53.84 Aligned_cols=68 Identities=21% Similarity=0.260 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHhccCChhhH-HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 297 IFGSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 297 v~~~~l~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
+++.++++++...++|+.|.+.+ ++..-+.-+.+.+.+++++||++++.+++|.++|+.|++..+..+
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~~ 104 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLST 104 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhccC
Confidence 35567799999999999998876 444557889999999999999999999999999999999987543
No 59
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.56 E-value=0.0021 Score=60.96 Aligned_cols=124 Identities=13% Similarity=0.094 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhhcCC----ChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017782 233 SMAVGTVMVRWVSKYS----DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF 308 (366)
Q Consensus 233 ~~a~~~v~~r~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~ 308 (366)
++..+.+..+++.++. .+..+++.+.+...+...+........ ..+...+...+..+ +...++..+-+
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~ 82 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP-------KSRKIPLKKYAILS-FLFFLASVLSN 82 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc-------CCCcChHHHHHHHH-HHHHHHHHHHH
Confidence 4445666777754332 266788888888888777766554411 11222333334445 44566889999
Q ss_pred HHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 309 YSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 309 ~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
.++++++...-.++....|+..++++++++|++.+..++++..++.+|+.+....+
T Consensus 83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~ 138 (303)
T PF08449_consen 83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSD 138 (303)
T ss_pred HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecc
Confidence 99999999999999999999999999999999999999999999999999877644
No 60
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.55 E-value=0.013 Score=54.80 Aligned_cols=231 Identities=16% Similarity=0.149 Sum_probs=148.7
Q ss_pred hHHHHHHHhhcCcC-HHHHHH--HHHHHHHHHHHHHHHHhC-CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 017782 130 TAMVAMKEVLPKAG-TFFVAA--FRLIPAGLLLITFASSQG-RKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAG 205 (366)
Q Consensus 130 ~~~~~~k~~~~~~~-p~~~~~--~R~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~ 205 (366)
.+.+.-|+++...+ |+.+.. ...+...+++...-+.+- +..+.+++..+..+=..++. .+....-..+++|.++.
T Consensus 26 lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf-~~~i~t~~~slk~lnVp 104 (314)
T KOG1444|consen 26 LMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLF-VGMLFTGSKSLKYLNVP 104 (314)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHH-HHHHHHccccccccCch
Confidence 45667788877533 444444 777766555544333322 22334455555444444443 23344556677787777
Q ss_pred cccc--------------------c----------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhc--C
Q 017782 206 LGSA--------------------P----------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSK--Y 247 (366)
Q Consensus 206 ~a~~--------------------P----------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~--~ 247 (366)
.-++ | .....+.+....|..+++...+.-+.+.+..|+..+ +
T Consensus 105 m~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~ 184 (314)
T KOG1444|consen 105 MFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSAN 184 (314)
T ss_pred HHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 6666 1 011122233334899999999999999999998643 3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCC-cccc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhh
Q 017782 248 SDPVMATGWHMVIGGLPLMVISVLNHDPV-YGES-VKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFL 325 (366)
Q Consensus 248 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l 325 (366)
.+-...++|..+....+..+...+.++.. ...+ ....+...|..+...++++.++.| +-.+..+..+++..++....
T Consensus 185 l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~ 263 (314)
T KOG1444|consen 185 LNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAK 263 (314)
T ss_pred ccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhh
Confidence 44566788888888888888777766532 0001 112234456667777766666554 55678888899888888866
Q ss_pred HHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 326 TPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 326 ~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
.-..+.+.+.++++++.++..++|..+-+.|.++++.
T Consensus 264 n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~ 300 (314)
T KOG1444|consen 264 NKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY 300 (314)
T ss_pred hhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence 6667777777777888999999999998888887664
No 61
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.53 E-value=0.0003 Score=66.47 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=86.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 017782 219 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIF 298 (366)
Q Consensus 219 ~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~ 298 (366)
.+..|.++++.++++.++...+.|+-..+.+....-.- .. .........|+ .|++
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~-----------------~~----~~~~l~~~~W~----~G~~ 58 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG-----------------SG----GRSYLRRPLWW----IGLL 58 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-----------------ch----hhHHHhhHHHH----HHHH
Confidence 45679999999999999999999985433222000000 00 00001111232 3334
Q ss_pred HHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 299 GSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 299 ~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
...++..+...|+...+++.++++..+..++.++++..++||+++..+++|.++++.|+.++.
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 445677788899999999999999999999999999999999999999999999999987654
No 62
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.44 E-value=0.0015 Score=50.64 Aligned_cols=57 Identities=19% Similarity=0.270 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhccCChhhHH-HhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHH
Q 017782 297 IFGSAISYGVYFYSATKGSLTKLS-SLTFLTPMFASIFGFLYLGETFSPLQLVGAAVT 353 (366)
Q Consensus 297 v~~~~l~~~l~~~al~~~~a~~~s-~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lI 353 (366)
+.+.+++++++.+++|+.+.+.+= +...+..+...+.+++++||++++.+++|.++|
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 346677999999999999999994 455699999999999999999999999999886
No 63
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=97.37 E-value=0.065 Score=49.89 Aligned_cols=216 Identities=13% Similarity=0.112 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-----c---
Q 017782 144 TFFVAAFRLIPAGLLLITFASSQGRKL-----PSGFNAWVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA-----P--- 210 (366)
Q Consensus 144 p~~~~~~R~~~a~l~l~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a~~-----P--- 210 (366)
|..++.+.+++-.++-.......+++. ...++...+-+.-..+..+...++-.++++|++.+.-++ +
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI 124 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI 124 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence 777777776655554443333322222 223333333333333345777888889999999888777 1
Q ss_pred ----------------------------cccCCCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCC-----ChHHHHHHH
Q 017782 211 ----------------------------AFDESNSSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS-----DPVMATGWH 257 (366)
Q Consensus 211 ----------------------------~~~~~~~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~-----~~~~~~~~~ 257 (366)
.+.-.+.+....|..+.+++.++-++--...+.+.++. +|...+...
T Consensus 125 llFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l 204 (349)
T KOG1443|consen 125 LLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHL 204 (349)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHh
Confidence 11223444555688888888888777777766654333 455555555
Q ss_pred HHHHHHHHHHHHHHhcCCCcc---cccccCCHH-HHHHHHHHHHHHHHHHHH---HHHHHhccCChhhHHHhhhhHHHHH
Q 017782 258 MVIGGLPLMVISVLNHDPVYG---ESVKELTSS-DILALLYTSIFGSAISYG---VYFYSATKGSLTKLSSLTFLTPMFA 330 (366)
Q Consensus 258 ~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~ll~~gv~~~~l~~~---l~~~al~~~~a~~~s~~~~l~Pv~a 330 (366)
.-.-.+.+++..+..+++... ..+...+.. .+..+..++ .++.+++. ..+.-+.+.+.-..++..-..-+.+
T Consensus 205 ~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~-l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~t 283 (349)
T KOG1443|consen 205 QPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLIS-LGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCT 283 (349)
T ss_pred hhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHH-HHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHH
Confidence 555555556666655555321 112222222 233333333 23333333 3455677888888999999999999
Q ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHHHh
Q 017782 331 SIFGFLYLGETFSPLQLVGAAVTVVAIYLV 360 (366)
Q Consensus 331 ~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~ 360 (366)
.++|.++.+|+++..-|+|..+.+.|+...
T Consensus 284 l~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 284 LLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999987
No 64
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=97.30 E-value=0.024 Score=52.01 Aligned_cols=230 Identities=20% Similarity=0.189 Sum_probs=142.2
Q ss_pred hhHHHHHHHhhc----Cc----CHHHHHHHHHHHHHHHHHHHHHHhCCCCC------------C---ChhHHHHHHHHHH
Q 017782 129 GTAMVAMKEVLP----KA----GTFFVAAFRLIPAGLLLITFASSQGRKLP------------S---GFNAWVSIFLFAL 185 (366)
Q Consensus 129 g~~~~~~k~~~~----~~----~p~~~~~~R~~~a~l~l~~~~~~~~~~~~------------~---~~~~~~~~~~~g~ 185 (366)
+.+-+..|++-+ +. +|+..+..-++-=++++..+.+.+.+... . +.+. ...+.-++
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p-~lfl~Pal 94 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP-VLFLPPAL 94 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc-ceecChHH
Confidence 456778887644 22 36666666666555666666555433211 0 1111 11222344
Q ss_pred HHHHHHHHHHHHHhhccccccccc----------------------c-------------------c--c-cC--CCCcc
Q 017782 186 VDASCFQGFLAQGLQRTSAGLGSA----------------------P-------------------A--F-DE--SNSSL 219 (366)
Q Consensus 186 l~~~~~~~~~~~al~~~~~~~a~~----------------------P-------------------~--~-~~--~~~~~ 219 (366)
+..++.. +.|.|+.+|+++.-.+ + . . .. .+-+.
T Consensus 95 ~Di~gss-lm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~ 173 (372)
T KOG3912|consen 95 CDIAGSS-LMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSS 173 (372)
T ss_pred HHHhhhH-HHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccccc
Confidence 4444333 6788888888776444 1 0 0 11 11234
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHHHh----cCCCcccccccCCHHHHHHH-
Q 017782 220 WGSGEWWMLLAAQSMAVGTVMVRWVSK--YSDPVMATGWHMVIGGLPLMVISVLN----HDPVYGESVKELTSSDILAL- 292 (366)
Q Consensus 220 ~~~G~l~allaa~~~a~~~v~~r~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l- 292 (366)
...|+++.+.+-+.-|+.+++-+|..+ .++|...+.|..++|.++..+++... ....+..+ ..-..++|...
T Consensus 174 iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~-~~g~~eD~~~~~ 252 (372)
T KOG3912|consen 174 IITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCN-PRGVLEDWGDAF 252 (372)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCC-CCcchhhHHHHH
Confidence 557999999999999999999887544 46899999999999976655444321 11111111 11112333321
Q ss_pred --------HHHHHHHHHHHHHHHHHH----hccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHh
Q 017782 293 --------LYTSIFGSAISYGVYFYS----ATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 360 (366)
Q Consensus 293 --------l~~gv~~~~l~~~l~~~a----l~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~ 360 (366)
+++...+..++..+++.+ -|..+++.=.++..+...+-=+++.....|.....|+.|..+.+.|++++
T Consensus 253 ~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY 332 (372)
T KOG3912|consen 253 AALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILY 332 (372)
T ss_pred HHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333434444444444443 45678888888888888888888888899999999999999999999986
Q ss_pred c
Q 017782 361 N 361 (366)
Q Consensus 361 ~ 361 (366)
+
T Consensus 333 ~ 333 (372)
T KOG3912|consen 333 N 333 (372)
T ss_pred H
Confidence 5
No 65
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.22 E-value=0.013 Score=49.23 Aligned_cols=139 Identities=12% Similarity=0.176 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHH
Q 017782 222 SGEWWMLLAAQSMAVGTVMVRWVSKYSD-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGS 300 (366)
Q Consensus 222 ~G~l~allaa~~~a~~~v~~r~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~ 300 (366)
...++++++.++-.+..-+.-++.+..+ |.........+|.+.+..+.+..+..... .......|+..+ -|+++
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~---a~~~~~pwW~~~-GG~lG- 79 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGL---AAVASAPWWAWI-GGLLG- 79 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCch---hhccCCchHHHH-ccchh-
Confidence 4577888999999999988888877665 88888888999888888776663332211 111222333332 23333
Q ss_pred HHHHHHHHHHhccCChh-hHHHhhhhHHHHHHHHHHHHhC----CCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 301 AISYGVYFYSATKGSLT-KLSSLTFLTPMFASIFGFLYLG----ETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 301 ~l~~~l~~~al~~~~a~-~~s~~~~l~Pv~a~i~~~l~lg----E~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
.+--+.......+++++ .+.....-|.+.+++++.+=+. .+++...++|++++++|+++.+++++
T Consensus 80 a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~~ 149 (150)
T COG3238 80 AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFGA 149 (150)
T ss_pred hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccccc
Confidence 22333344555665554 5556666788999998877665 56899999999999999877777654
No 66
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.19 E-value=0.0047 Score=57.04 Aligned_cols=110 Identities=15% Similarity=0.217 Sum_probs=78.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhh-hhHH
Q 017782 249 DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLT-FLTP 327 (366)
Q Consensus 249 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~-~l~P 327 (366)
+|...+.-..+.+.++.++..++ .++.+ ..+...++.-+..| +.-.+++..+++++++.+.+++-++. -++.
T Consensus 11 ~~~~Q~lG~t~Gali~alv~~~~-~~p~~-----~~~~~~~~~~~lsG-~~W~iGq~~qf~s~~~~GVS~tmPiStg~QL 83 (269)
T PF06800_consen 11 KPANQILGTTIGALIFALVVFLF-RQPAF-----SMSGTSFIVAFLSG-AFWAIGQIGQFKSFKKIGVSKTMPISTGLQL 83 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-hCCCc-----chHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcceeeeccchhHHH
Confidence 44444444444444444444443 33321 22346666666667 45677999999999999999999998 5688
Q ss_pred HHHHHHHHHHhCCCCChhHHH----HHHHHHHHHHHhcccCC
Q 017782 328 MFASIFGFLYLGETFSPLQLV----GAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 328 v~a~i~~~l~lgE~~~~~~~v----G~~lIl~g~~l~~~~~~ 365 (366)
+.+.++++++|||+-+..+++ +.++|+.|+++..++++
T Consensus 84 vg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~ 125 (269)
T PF06800_consen 84 VGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDK 125 (269)
T ss_pred HHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999998876544 66799999999887764
No 67
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.14 E-value=0.0067 Score=58.16 Aligned_cols=137 Identities=15% Similarity=0.076 Sum_probs=96.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHH----HhcCCCcccccccCCHHHHHHHHHH
Q 017782 220 WGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISV----LNHDPVYGESVKELTSSDILALLYT 295 (366)
Q Consensus 220 ~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ll~~ 295 (366)
...|.++.+++++|++.+.+-.|+. +.-+-... |. +.+. +..++.. ....+.+.......+...+..-+..
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~--W~-v~gi-~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~ 79 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKKV-KKWSWETM--WS-VGGI-FSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF 79 (345)
T ss_pred hHHHHHHHHHHHHHhhccccccccc-CCCchhHH--HH-HHHH-HHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence 4569999999999999999999995 44443222 32 2222 2221111 1122333333344567777666666
Q ss_pred HHHHHHHHHHHHHHHhccCChhhHHHhh-hhHHHHHHHHHHHHhCCCC---C----hhHHHHHHHHHHHHHHhcc
Q 017782 296 SIFGSAISYGVYFYSATKGSLTKLSSLT-FLTPMFASIFGFLYLGETF---S----PLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 296 gv~~~~l~~~l~~~al~~~~a~~~s~~~-~l~Pv~a~i~~~l~lgE~~---~----~~~~vG~~lIl~g~~l~~~ 362 (366)
|+ .-.+++..+..++|+.+.++.-++. -++.+.+.+++.+++||.. + ...++|.+++++|+.+..+
T Consensus 80 G~-~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 80 GA-LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HH-HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 74 4577999999999999999887765 4689999999999999865 2 3468899999999999887
No 68
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.00 E-value=0.00059 Score=61.22 Aligned_cols=232 Identities=17% Similarity=0.136 Sum_probs=147.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 017782 117 EWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLA 196 (366)
Q Consensus 117 g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 196 (366)
.+++.++.++.||+........ +-+|.+...--- ++++++....+....+.. ..+.+...++.|.++ ...+...+
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~--GG~p~qQ~lGtT-~GALifaiiv~~~~~p~~-T~~~~iv~~isG~~W-s~GQ~~Qf 77 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF--GGKPYQQTLGTT-LGALIFAIIVFLFVSPEL-TLTIFIVGFISGAFW-SFGQANQF 77 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec--CCChhHhhhhcc-HHHHHHHHHHheeecCcc-chhhHHHHHHhhhHh-hhhhhhhh
Confidence 5788899999999998766522 345655554433 334444333333333322 335666667777765 55666899
Q ss_pred HHhhccccccccc-----------------------c--------------------ccc------CCCCccchHHHHHH
Q 017782 197 QGLQRTSAGLGSA-----------------------P--------------------AFD------ESNSSLWGSGEWWM 227 (366)
Q Consensus 197 ~al~~~~~~~a~~-----------------------P--------------------~~~------~~~~~~~~~G~l~a 227 (366)
.+.++..++.+.. | ... .++.+...+|....
T Consensus 78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L 157 (288)
T COG4975 78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVIL 157 (288)
T ss_pred hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeee
Confidence 9999999888766 1 011 12233455788888
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHH
Q 017782 228 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVY 307 (366)
Q Consensus 228 llaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~ 307 (366)
+.+.+.|-.|.++.+... .|......-+. ++.++..+..-..+.. ...+...|..+ ..|+ .-+++...+
T Consensus 158 ~iSt~GYv~yvvl~~~f~--v~g~saiLPqA-iGMv~~ali~~~~~~~------~~~~K~t~~ni-i~G~-~Wa~GNl~m 226 (288)
T COG4975 158 LISTLGYVGYVVLFQLFD--VDGLSAILPQA-IGMVIGALILGFFKME------KRFNKYTWLNI-IPGL-IWAIGNLFM 226 (288)
T ss_pred eeeccceeeeEeeecccc--ccchhhhhHHH-HHHHHHHHHHhhcccc------cchHHHHHHHH-hhHH-HHHhhHHHH
Confidence 889999999999888763 44444333332 2222222222221111 12223344433 3563 356688899
Q ss_pred HHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhH----HHHHHHHHHHHHHhcccC
Q 017782 308 FYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQ----LVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 308 ~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~----~vG~~lIl~g~~l~~~~~ 364 (366)
..+.++.+.+..=.+.-+..+++.+-|.++++|+=|..+ ++|..+++.|..+....|
T Consensus 227 l~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~K 287 (288)
T COG4975 227 LLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIAK 287 (288)
T ss_pred HHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhheec
Confidence 999999888888888888999999999999999988765 567788888877765444
No 69
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.82 E-value=0.0076 Score=55.29 Aligned_cols=78 Identities=21% Similarity=0.259 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 286 SSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 286 ~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
.++...+..-+ +...+...+.+.++++.+++.-.++..+..++++++.+++++++++..||++..+++.|+.+++...
T Consensus 14 ~~~~~~~~vPA-~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~ 91 (244)
T PF04142_consen 14 PKDTLKLAVPA-LLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS 91 (244)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence 34444444445 3467789999999999999999999999999999999999999999999999999999999987654
No 70
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.46 E-value=0.068 Score=48.95 Aligned_cols=143 Identities=14% Similarity=0.021 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHHHhcCCCccc-ccccCCHHHHHHHHHHHH
Q 017782 221 GSGEWWMLLAAQSMAVGTVMVRWVSKY--SDPVMATGWHMVIGGLPLMVISVLNHDPVYGE-SVKELTSSDILALLYTSI 297 (366)
Q Consensus 221 ~~G~l~allaa~~~a~~~v~~r~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~gv 297 (366)
..|..+.-++-++=|+---++.+..+. .+....+++...+|.+.++......++..-.. .-...+.+.....+..+
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s- 267 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS- 267 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH-
Confidence 357776666666666555556554333 23466777888888887776665554431110 01122344555555555
Q ss_pred HHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 298 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 298 ~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
..+.+++.....-++..++..++.+....=-++++++++++..+++..-.-|..+|+.|+++-...|
T Consensus 268 ~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 268 LAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 4456688888888999999999999999999999999999999999999999999999999977665
No 71
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.20 E-value=0.0033 Score=56.57 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 302 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l 302 (366)
+.+++|+=++.|+..-....|. .-+|...+.-..+.+.++.+.+.++ ..| ..+...+..-+..|.+ -.+
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~--GG~p~qQ~lGtT~GALifaiiv~~~-~~p-------~~T~~~~iv~~isG~~-Ws~ 71 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF--GGKPYQQTLGTTLGALIFAIIVFLF-VSP-------ELTLTIFIVGFISGAF-WSF 71 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec--CCChhHhhhhccHHHHHHHHHHhee-ecC-------ccchhhHHHHHHhhhH-hhh
Confidence 5788999999999887776665 3345555555455555554444443 222 3455556555555644 456
Q ss_pred HHHHHHHHhccCChhhHHHhhh-hHHHHHHHHHHHHhCCCCChhHH----HHHHHHHHHHHHhcccCC
Q 017782 303 SYGVYFYSATKGSLTKLSSLTF-LTPMFASIFGFLYLGETFSPLQL----VGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~-l~Pv~a~i~~~l~lgE~~~~~~~----vG~~lIl~g~~l~~~~~~ 365 (366)
+|....++++..+.+++.++.. +|.|-+.++|++.|||+.+..++ +..++++.|+++..+++|
T Consensus 72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 9999999999999999999865 69999999999999999988764 455688999999888764
No 72
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.15 E-value=0.012 Score=53.81 Aligned_cols=147 Identities=16% Similarity=0.096 Sum_probs=102.5
Q ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHhhcCC-C-hHHHHHHHHHHHHHHHHHHHHHhcCCCccccccc-CCHHHHHHHH
Q 017782 217 SSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYS-D-PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKE-LTSSDILALL 293 (366)
Q Consensus 217 ~~~~~~G~l~allaa~~~a~~~v~~r~~~~~~-~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll 293 (366)
+.....|.+++.++.++-|+..+.+|+..... | -...++|.-+.+.+..++...+.++.......+. ++..-|..+.
T Consensus 180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mt 259 (347)
T KOG1442|consen 180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMT 259 (347)
T ss_pred CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHH
Confidence 34456799999999999999999999864433 3 3456677778888888887776655421111112 2455677777
Q ss_pred HHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 294 YTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 294 ~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
..|+++..++|.- .+=+|-.+|-.-.+-....-..-.+++..+++|.-+..-|-|-.+|++|...+.+-|
T Consensus 260 LsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 260 LSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK 329 (347)
T ss_pred HHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence 7777766555432 222455566555555555666677888899999999999999999999988877644
No 73
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.76 E-value=0.027 Score=45.00 Aligned_cols=109 Identities=16% Similarity=0.170 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017782 229 LAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYF 308 (366)
Q Consensus 229 laa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~ 308 (366)
+-++.|++..-+.|+-.+..+...... +..-.... ++ .+++ +.+ .+.....+-..|+
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~-----Ll------------~n~~---y~i--pf~lNq~GSv~f~ 59 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKF-----LL------------LNPK---YII--PFLLNQSGSVLFF 59 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHH-----HH------------HhHH---HHH--HHHHHHHHHHHHH
Confidence 456788889999998765554433221 21111111 00 0122 222 2222344677889
Q ss_pred HHhccCChhhHHHhh-hhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHh
Q 017782 309 YSATKGSLTKLSSLT-FLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLV 360 (366)
Q Consensus 309 ~al~~~~a~~~s~~~-~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~ 360 (366)
+.+.+.+.+.+.++. .+.-+++++.++++.+|..+...++|.++|+.|+.+.
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 999999999999995 8899999999988888888999999999999998763
No 74
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=95.67 E-value=0.066 Score=47.64 Aligned_cols=142 Identities=14% Similarity=0.154 Sum_probs=107.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHH
Q 017782 219 LWGSGEWWMLLAAQSMAVGTVMVRWVSKY--SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTS 296 (366)
Q Consensus 219 ~~~~G~l~allaa~~~a~~~v~~r~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~g 296 (366)
..+.|.+++....+.-+.+.+..|+..+- ..-...++|.-+.+..+++...+..+++.-.......+.+.+..+...|
T Consensus 152 ~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISg 231 (309)
T COG5070 152 ILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISG 231 (309)
T ss_pred ccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHH
Confidence 45669999999999999999888875432 2345677888899988888888888776432223344556666666677
Q ss_pred HHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 297 IFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 297 v~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
+...+ --++-.|.++..+.+.-+++..+.-.-.++-|.++++|+.+...+....+-..+..++.
T Consensus 232 l~svg-iSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYa 295 (309)
T COG5070 232 LCSVG-ISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYA 295 (309)
T ss_pred HHHhh-hhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 54444 44567888999999999999999999999999999999999998888776665555543
No 75
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=95.34 E-value=0.077 Score=46.32 Aligned_cols=144 Identities=9% Similarity=-0.095 Sum_probs=94.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHH---HHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHH
Q 017782 219 LWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVM---ATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYT 295 (366)
Q Consensus 219 ~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 295 (366)
.-..|..++.+++...|+|-+..|++....+--. .+.-..++..++...-.++..-... .++.......|..+...
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V-E~~qsFA~~PWG~l~G~ 210 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV-EHLQSFAAAPWGCLCGA 210 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch-HHHHHHhhCCchhhhhH
Confidence 3456999999999999999999999754443222 2211122222222211111111111 11233344567777666
Q ss_pred HHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 296 SIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 296 gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
+.+... -..+.+.++..+.|...++-+.....-.+.+..++-+-..+...++|..+|+.|-+++..++
T Consensus 211 A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 211 AGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred HHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 544333 45667788889999999998888888888999877666678888999999999999887765
No 76
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=94.93 E-value=0.85 Score=43.19 Aligned_cols=80 Identities=11% Similarity=0.164 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhH-HHHHHHHHHHHhCCC--CCh----hHHHHHHHHHHHH
Q 017782 285 TSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLT-PMFASIFGFLYLGET--FSP----LQLVGAAVTVVAI 357 (366)
Q Consensus 285 ~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~-Pv~a~i~~~l~lgE~--~~~----~~~vG~~lIl~g~ 357 (366)
.+..|..++.+ +++........|+|+++.+++.+.++.+.. -..+.+-+.++++|. .+. ....|..+++.|+
T Consensus 209 ~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV 287 (300)
T PF05653_consen 209 YPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGV 287 (300)
T ss_pred hhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhh
Confidence 35556555443 355566777889999999999999888874 455666667778876 444 3467788999999
Q ss_pred HHhcccCC
Q 017782 358 YLVNFRGS 365 (366)
Q Consensus 358 ~l~~~~~~ 365 (366)
++....|+
T Consensus 288 ~lL~~~~~ 295 (300)
T PF05653_consen 288 FLLSSSKD 295 (300)
T ss_pred heeeccCc
Confidence 99887664
No 77
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.29 E-value=0.018 Score=53.82 Aligned_cols=120 Identities=12% Similarity=0.092 Sum_probs=89.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHH
Q 017782 218 SLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSI 297 (366)
Q Consensus 218 ~~~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv 297 (366)
..+..|.++++.+.++.+...++.|+-.++... . ..-.++.. ........| +.|+
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~---~--------------~~ra~~gg----~~yl~~~~W----w~G~ 71 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA---S--------------GLRAGEGG----YGYLKEPLW----WAGM 71 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhh---h--------------cccccCCC----cchhhhHHH----HHHH
Confidence 344568999999999999999888885443221 0 00111111 111111223 4577
Q ss_pred HHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 298 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 298 ~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
+..++|-...+.|+...+++.++++..+..+..++++..+++|++++...+|+++.++|..++..
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 77788999999999999999999999999999999999999999999999999988888776543
No 78
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=94.12 E-value=1.9 Score=41.22 Aligned_cols=114 Identities=16% Similarity=0.139 Sum_probs=79.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHH
Q 017782 248 SDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVK------ELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSS 321 (366)
Q Consensus 248 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~ 321 (366)
+.+.+..+..=++-.+++....+............ ...+.+...+..-+ +...+-..+++.++.+.+++.-.+
T Consensus 45 f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa-~iYalqNnl~yval~~ldaatyqV 123 (345)
T KOG2234|consen 45 FLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPA-LIYALQNNLQYVALSNLDAATYQV 123 (345)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHH-HHHHHhhhHHHHHHhcCCchhhhh
Confidence 44555555555666666666655542110000011 11222222222223 334556779999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 322 LTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 322 ~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
...+..+.++++.+++++++++..||....+...|+.+++.
T Consensus 124 t~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~ 164 (345)
T KOG2234|consen 124 TYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL 164 (345)
T ss_pred hhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999983
No 79
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=93.62 E-value=0.34 Score=44.10 Aligned_cols=95 Identities=12% Similarity=0.015 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 017782 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGF 194 (366)
Q Consensus 115 ~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 194 (366)
..|..+.+.+..+|+...+..|.+.+..+...-+..-+.+++++.+|+-.........++......+..+++.....+.+
T Consensus 147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsL 226 (292)
T COG5006 147 PVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSL 226 (292)
T ss_pred HHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHH
Confidence 57899999999999999999998886666667778889999999999988776665566678888899999999999999
Q ss_pred HHHHhhccccccccc
Q 017782 195 LAQGLQRTSAGLGSA 209 (366)
Q Consensus 195 ~~~al~~~~~~~a~~ 209 (366)
...++++.|...-++
T Consensus 227 EmiAL~rlp~~~F~~ 241 (292)
T COG5006 227 EMIALRRLPARTFGT 241 (292)
T ss_pred HHHHHhhCChhHHHH
Confidence 999999999866555
No 80
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=93.40 E-value=1.3 Score=36.80 Aligned_cols=92 Identities=14% Similarity=0.026 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhc-------CcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC--------C-----ChhH
Q 017782 117 EWAVLVSPFFFWGTAMVAMKEVLP-------KAGTFFVAAFRLIPAGLLLITFASSQGRKLP--------S-----GFNA 176 (366)
Q Consensus 117 g~l~llla~~~~g~~~~~~k~~~~-------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~--------~-----~~~~ 176 (366)
|.++.+.+.++.+...+..|...+ +.++.++..+-...+.++++|+....++... . +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 467889999999999999997654 4789999999999999999988776554320 0 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Q 017782 177 WVSIFLFALVDASCFQGFLAQGLQRTSAGLGSA 209 (366)
Q Consensus 177 ~~~~~~~g~l~~~~~~~~~~~al~~~~~~~a~~ 209 (366)
+...+..|+++ ...+.+.+..++++++-..++
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v 112 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSV 112 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHH
Confidence 44445555555 455558899999998877666
No 81
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=93.33 E-value=0.072 Score=46.50 Aligned_cols=62 Identities=18% Similarity=0.349 Sum_probs=57.6
Q ss_pred HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
+.++|..|+++++++.++.+..-.-.+..+++|+++||++....++.+++.+.|++.+.+.+
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 68899999999999999999999999999999999999999999999999999998877543
No 82
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=92.50 E-value=1.8 Score=40.02 Aligned_cols=139 Identities=14% Similarity=0.155 Sum_probs=80.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHH----HHhhcCCChHHHHHHHHHHHHHHHHHHH---------HHhcCCCcccccccCCH
Q 017782 220 WGSGEWWMLLAAQSMAVGTVMV----RWVSKYSDPVMATGWHMVIGGLPLMVIS---------VLNHDPVYGESVKELTS 286 (366)
Q Consensus 220 ~~~G~l~allaa~~~a~~~v~~----r~~~~~~~~~~~~~~~~~~~~v~~~~~~---------~~~~~~~~~~~~~~~~~ 286 (366)
|..|..+...+-+.-|.--+.. ||.+| ++.+.++|.-+......+... ....+..........-+
T Consensus 162 w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGK--h~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP 239 (330)
T KOG1583|consen 162 WLIGIALLVFALLLSAYMGIYQETTYQKYGK--HWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVP 239 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCcccc
Confidence 4456555444444444444444 44433 577777887766655444321 01111000000011124
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 287 SDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 287 ~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
..|..++... +.+..+.--.+.--...++-.+++...+.=.+..+++++.+..+.+++-|+|+++|..|.++..
T Consensus 240 ~~~~yLl~n~-L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 240 SMWVYLLFNV-LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHHHHHH-HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 4565555433 2222222222333345567778888999999999999999999999999999999999998754
No 83
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=92.30 E-value=0.11 Score=49.33 Aligned_cols=118 Identities=22% Similarity=0.294 Sum_probs=79.6
Q ss_pred HHHHHhhcC--C-ChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 017782 239 VMVRWVSKY--S-DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGS 315 (366)
Q Consensus 239 v~~r~~~~~--~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~ 315 (366)
+..|++.+. . .|...+..+...+.+.....-.....+. ....+...|..++-+|++ ..++.++-+.++++.+
T Consensus 34 ~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~----~~~~~~~~~~~llpl~~~-~~~~~v~~n~Sl~~v~ 108 (316)
T KOG1441|consen 34 ILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPP----SKISSKLPLRTLLPLGLV-FCISHVLGNVSLSYVP 108 (316)
T ss_pred EeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC----CccccccchHHHHHHHHH-HHHHHHhcchhhhccc
Confidence 344766552 2 2455556655555554444432222221 112234567777777744 5669999999999999
Q ss_pred hhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 316 LTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 316 a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
.+.....-.++|++..++++++.+|+.+...+.-...|+.|+.+..
T Consensus 109 VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias 154 (316)
T KOG1441|consen 109 VSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIAS 154 (316)
T ss_pred hhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEee
Confidence 9999999999999999999999999988877665555555555443
No 84
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=91.87 E-value=0.47 Score=37.80 Aligned_cols=55 Identities=20% Similarity=0.243 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCC----CChhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 017782 149 AFRLIPAGLLLITFASSQGRKLP----SGFNAWVSIFLFALVDASCFQGFLAQGLQRTS 203 (366)
Q Consensus 149 ~~R~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~ 203 (366)
.+|+.++.+++..+...+++... .+++.+.+....|+++....+.++++|+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~ 60 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP 60 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 68999999998887777554311 12355667777788887778889999999988
No 85
>PRK02237 hypothetical protein; Provisional
Probab=91.63 E-value=1.5 Score=34.45 Aligned_cols=47 Identities=11% Similarity=0.128 Sum_probs=40.5
Q ss_pred HHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 319 LSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 319 ~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
-+.+.-...+.+.++++.+-|++|+.+.++|+++.+.|..++....|
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 35566677788899999999999999999999999999998876654
No 86
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=90.67 E-value=0.27 Score=47.20 Aligned_cols=65 Identities=12% Similarity=0.155 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 300 SAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 300 ~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
-+++.+.++.|+++.+.+-.+++..+.-+|+.++|.++-+|++++...++..+-++|++++...+
T Consensus 169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~ 233 (416)
T KOG2765|consen 169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGD 233 (416)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecc
Confidence 46789999999999999999999999999999999999999999999999999999999988763
No 87
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=90.18 E-value=5.7 Score=37.98 Aligned_cols=140 Identities=11% Similarity=-0.023 Sum_probs=87.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHH-HHHhcCCCcccccccCCHHHHHHHHHHHHH
Q 017782 220 WGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVI-SVLNHDPVYGESVKELTSSDILALLYTSIF 298 (366)
Q Consensus 220 ~~~G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~ 298 (366)
...|.++..+++++.+.+.+=.||+. +-+-...=..+.+++- +.+|. .....-|.+.......+...+......|++
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk-~WsWEs~Wlv~gi~sw-li~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l 82 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVK-GWSWESYWLVQGIFSW-LIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL 82 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcC-CccHHHHHHHHHHHHH-HHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence 45699999999999999999999983 3332222222222222 22222 112223333323344455566666667744
Q ss_pred HHHHHHHHHHHHhccCChhhH-HHhhhhHHHHHHHHHHHHhC-------CCCChhHHHHHHHHHHHHHHhcc
Q 017782 299 GSAISYGVYFYSATKGSLTKL-SSLTFLTPMFASIFGFLYLG-------ETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 299 ~~~l~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~i~~~l~lg-------E~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
-+++-..|-.++|+++.+.. ++..-+.-+++.++--++.| ++-....++|.++.++|+.+..+
T Consensus 83 -WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~ 153 (344)
T PF06379_consen 83 -WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK 153 (344)
T ss_pred -HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH
Confidence 56788889999999987764 34455566666666555543 23345789999999999998765
No 88
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=89.11 E-value=13 Score=35.21 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=81.2
Q ss_pred HHHHHHHHHH----HHHHHHhhcCCC-h--HHHHHHHHHHHHHHHHHHHHH--hcCCCcccccccCCHHHHH--HHHHHH
Q 017782 228 LLAAQSMAVG----TVMVRWVSKYSD-P--VMATGWHMVIGGLPLMVISVL--NHDPVYGESVKELTSSDIL--ALLYTS 296 (366)
Q Consensus 228 llaa~~~a~~----~v~~r~~~~~~~-~--~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~ll~~g 296 (366)
++++++|++. .+..|.+...++ + ...+.+|.++..+.....-.. .+.+.+ .....+.|. .+++.+
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l----~~~~~kk~~P~~~lf~~ 89 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL----DLRTAKKWFPVSLLFVG 89 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc----ChHHHHHHccHHHHHHH
Confidence 3444444443 445566544443 2 334457777777666554321 111111 111233342 334444
Q ss_pred HHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 297 IFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 297 v~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
-+-+ -.+++|+++.....++..+.|++.++....++|.+++...+.....+++|.......
T Consensus 90 ~i~t------~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~ 150 (314)
T KOG1444|consen 90 MLFT------GSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFT 150 (314)
T ss_pred HHHH------ccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccc
Confidence 3333 378999999999999999999999999999999999999999999888888776543
No 89
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=88.55 E-value=1.1 Score=35.27 Aligned_cols=46 Identities=17% Similarity=0.275 Sum_probs=40.3
Q ss_pred HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 320 SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 320 s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
+.+.-...+.+.++++.+-|++|+.+.++|+++.+.|..++.+..|
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 4455666788999999999999999999999999999999987765
No 90
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=87.80 E-value=1.3 Score=41.11 Aligned_cols=66 Identities=14% Similarity=0.219 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 298 FGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 298 ~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
++-..+..+.+.++...+++.-.++.-...+|.-+++.-+++.+++..||.|...|.+|++++...
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 445557778889999999999999999999999999999999999999999999999999887543
No 91
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=87.14 E-value=6.7 Score=32.55 Aligned_cols=91 Identities=13% Similarity=-0.033 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHhhcCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCC-CCChhHHHHHHHHHHHHHHHHHHHH
Q 017782 118 WAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKL-PSGFNAWVSIFLFALVDASCFQGFL 195 (366)
Q Consensus 118 ~l~llla~~~~g~~~~~~k~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~~~~~ 195 (366)
+++.+++..+-+....+.-.+.+..+ |...+++-+..+.+++..+....+++. ...++..++..+-|+++ ..+..+.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG-~~~V~~~ 81 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLG-VFFVLSN 81 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHH-HHHHHHH
Confidence 44556666666666666666666665 999999999999999888877766532 22222334444455554 5555577
Q ss_pred HHHhhccccccccc
Q 017782 196 AQGLQRTSAGLGSA 209 (366)
Q Consensus 196 ~~al~~~~~~~a~~ 209 (366)
.+...+..++.+..
T Consensus 82 ~~~vp~lG~~~~~~ 95 (138)
T PF04657_consen 82 IILVPRLGAALTTI 95 (138)
T ss_pred HHHhhhhhHHHHHH
Confidence 77777777766554
No 92
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=85.90 E-value=2.5 Score=33.17 Aligned_cols=48 Identities=25% Similarity=0.278 Sum_probs=34.0
Q ss_pred CChhhHHHhhhh-HHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 314 GSLTKLSSLTFL-TPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 314 ~~a~~~s~~~~l-~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
.++.+.-+++-. ..++-+.++.++++|++++..+.|.++++++++++-
T Consensus 59 ~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 59 FSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred cCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 344444443332 333445678889999999999999999999988754
No 93
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=84.13 E-value=3.6 Score=37.21 Aligned_cols=130 Identities=8% Similarity=-0.030 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CCC-----------hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHH
Q 017782 226 WMLLAAQSMAVGTVMVRWVSK-YSD-----------PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALL 293 (366)
Q Consensus 226 ~allaa~~~a~~~v~~r~~~~-~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 293 (366)
++.+--+||=+|-+...|+.+ ++. ....+++++....+..=++..+..... .-+...|.+..
T Consensus 17 ca~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~------~D~t~~~~YaA 90 (337)
T KOG1580|consen 17 CAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTE------IDNTPTKMYAA 90 (337)
T ss_pred EecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccccc------ccCCcchHHHH
Confidence 344445688888888887643 222 345556666666665544433332211 11122333332
Q ss_pred HHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 294 YTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 294 ~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
.+ ....++...-+.|+++++=-..-+--.-.|+=.+++|+++.+..-+|..+.-..+|++|+.+...+
T Consensus 91 -cs-~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK 158 (337)
T KOG1580|consen 91 -CS-ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYK 158 (337)
T ss_pred -HH-HHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcc
Confidence 22 456667888899999998766666777889999999999999999999999999999999987765
No 94
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=82.61 E-value=4 Score=37.61 Aligned_cols=127 Identities=15% Similarity=-0.038 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 302 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l 302 (366)
|.+.+++++++|+.+.+=.|+.. ..|++..-++.+....++.+++.++.+.+.+ .+ | .++ |-.--..
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f-------~p--~-aml--gG~lW~~ 67 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-TGDGFFFQWVMCSGIFLVGLVVNLILGFPPF-------YP--W-AML--GGALWAT 67 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcc-------ee--H-HHh--hhhhhhc
Confidence 56778999999999999999985 4577666666666655666666665554432 11 1 111 1111222
Q ss_pred HHHHHHHHhccCChhhHHHhhhh-HHHHHHHHHHH-HhCCCC-----ChhHHHHHHHHHHHHHHhcc
Q 017782 303 SYGVYFYSATKGSLTKLSSLTFL-TPMFASIFGFL-YLGETF-----SPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~l-~Pv~a~i~~~l-~lgE~~-----~~~~~vG~~lIl~g~~l~~~ 362 (366)
+..+-.-.+|.++.+..-.+-.. .-+.+-..+-+ +||++. .+..++|.+++++|..+...
T Consensus 68 gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 68 GNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred CceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 44444555555555544443333 33444444432 344432 45689999999999887654
No 95
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=79.86 E-value=44 Score=31.55 Aligned_cols=107 Identities=9% Similarity=0.040 Sum_probs=77.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHH
Q 017782 249 DPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPM 328 (366)
Q Consensus 249 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv 328 (366)
++....+.+-+++.++...+.-..... ......|....+++ +...++-+|.+.|+|+++=-...+--.--.+
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~-------~~~~apl~~y~~is-~tn~~s~~~~yeaLKyvSyPtq~LaKscKmI 121 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE-------LSGVAPLYKYSLIS-FTNTLSSWCGYEALKYVSYPTQTLAKSCKMI 121 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc-------CCCCCchhHHhHHH-HHhhcchHHHHHHHHhccchHHHHHHHhhhh
Confidence 466677777777777764443322111 22334566666677 4556689999999999987666666666677
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhccc
Q 017782 329 FASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 329 ~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
-.++++.++.+.+.+...++-+.+|-+|+.+....
T Consensus 122 PVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~ 156 (327)
T KOG1581|consen 122 PVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLF 156 (327)
T ss_pred HHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEe
Confidence 77899999999999999999999999998775543
No 96
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.42 E-value=35 Score=32.43 Aligned_cols=80 Identities=10% Similarity=0.060 Sum_probs=60.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhh-HHHHHHHHHHHHhCCCC--Ch----hHHHHHHHHHHHH
Q 017782 285 TSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFL-TPMFASIFGFLYLGETF--SP----LQLVGAAVTVVAI 357 (366)
Q Consensus 285 ~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l-~Pv~a~i~~~l~lgE~~--~~----~~~vG~~lIl~g~ 357 (366)
.+..|..++.+. .+......-.++|++..+++.++++.|. -..++++-+.+++.|.- +. ....|...|+.|+
T Consensus 223 ~~~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~ 301 (335)
T KOG2922|consen 223 YPLTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGI 301 (335)
T ss_pred cHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhhee
Confidence 346666666554 4455577778999999999999999887 56677777888888874 33 3467888999999
Q ss_pred HHhcccCC
Q 017782 358 YLVNFRGS 365 (366)
Q Consensus 358 ~l~~~~~~ 365 (366)
+++...|+
T Consensus 302 flL~~~kd 309 (335)
T KOG2922|consen 302 FLLHRTKD 309 (335)
T ss_pred eEeeeecc
Confidence 99877654
No 97
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.26 E-value=7.2 Score=30.12 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=29.4
Q ss_pred HHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 329 FASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 329 ~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
+-..++.+.++|++.+..+.|..++++|++++-+
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 3345788889999999999999999999998765
No 98
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=75.50 E-value=13 Score=35.15 Aligned_cols=114 Identities=18% Similarity=0.233 Sum_probs=78.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhHHHH
Q 017782 250 PVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLTPMF 329 (366)
Q Consensus 250 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~ 329 (366)
|+..+..++++--......-...+...- ..-...++.+.+.-++-..+++++=..+-++++++++.+.-++.....++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~-r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVP-RARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCC-ccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHH
Confidence 5556666655544443333222222110 011244555443222233355666778899999999999999999999999
Q ss_pred HHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 330 ASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 330 a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
..+++.++-=|+++|.-..=..+|-+|+++..++.
T Consensus 124 IllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 99999999999999999999999999998877654
No 99
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=75.13 E-value=13 Score=29.09 Aligned_cols=46 Identities=11% Similarity=0.110 Sum_probs=38.7
Q ss_pred HHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccCC
Q 017782 320 SSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 320 s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
+.+.-...+.+.++.+++=|.+|+.+.++|+++.++|..++....|
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 4556667788899999999999999999999999999888776554
No 100
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=71.60 E-value=4.1 Score=31.96 Aligned_cols=59 Identities=25% Similarity=0.365 Sum_probs=47.2
Q ss_pred HHHHHHHHhccCChhhHHHhhhh-HHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhc
Q 017782 303 SYGVYFYSATKGSLTKLSSLTFL-TPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVN 361 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~l-~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~ 361 (366)
+-.+|+.-+++.+.+.+.++.+. .-.++.++|..+-.|......+.|..+|+.|+.+..
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 55667788888888888877654 778899999886556677889999999999998753
No 101
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=70.68 E-value=1.2e+02 Score=30.32 Aligned_cols=101 Identities=14% Similarity=0.122 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAI 302 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l 302 (366)
|.++..+.-+.+-+.=++.|+ +.||++.....+......++++++-. +- ...+.+++..+.+...+
T Consensus 301 giLFI~LTF~~fflfE~~~~~---~iHpiQY~LVGlAl~lFYlLLLSlSE-hi----------~F~~AYliAa~a~i~Li 366 (430)
T PF06123_consen 301 GILFIGLTFLAFFLFELLSKL---RIHPIQYLLVGLALVLFYLLLLSLSE-HI----------GFNLAYLIAALACIGLI 366 (430)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---cccHHHHHHHHHHHHHHHHHHHHHHh-hh----------chHHHHHHHHHHHHHHH
Confidence 677766666666555555544 68898877666655555555554432 22 22445554444333333
Q ss_pred HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhC
Q 017782 303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLG 339 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lg 339 (366)
+ +|..++-+-.-.-......+.-+.+.+++.+-..
T Consensus 367 ~--~Y~~~vl~~~k~~~~~~~~L~~LY~~Ly~lLq~E 401 (430)
T PF06123_consen 367 S--LYLSSVLKSWKRGLIFAGLLAALYGFLYVLLQSE 401 (430)
T ss_pred H--HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3 3344433333333333444555666666654433
No 102
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=69.93 E-value=21 Score=32.94 Aligned_cols=31 Identities=10% Similarity=0.114 Sum_probs=27.6
Q ss_pred hhhHHHHHHHHHHHHHHhhHHHHHHHhhcCc
Q 017782 112 LGMLLEWAVLVSPFFFWGTAMVAMKEVLPKA 142 (366)
Q Consensus 112 ~~~~~g~l~llla~~~~g~~~~~~k~~~~~~ 142 (366)
+++..|..+.+++.+++|++++-++++.++-
T Consensus 179 ~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 179 KKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred cchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 4568899999999999999999999988765
No 103
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=69.85 E-value=3.2 Score=38.42 Aligned_cols=115 Identities=13% Similarity=0.064 Sum_probs=78.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCC--CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHhhhhH
Q 017782 249 DPVMATGWHMVIGGLPLMVISVLNHDP--VYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATKGSLTKLSSLTFLT 326 (366)
Q Consensus 249 ~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~a~~~s~~~~l~ 326 (366)
-|..++++++++...++..+....-.. .+...-...+.+.-.-++=+. +...+.....++.+++.+.+.--+-..+.
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlpls-vVfi~mI~fnnlcL~yVgVaFYyvgRsLt 138 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLS-VVFILMISFNNLCLKYVGVAFYYVGRSLT 138 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchh-heeeeehhccceehhhcceEEEEeccchh
Confidence 478888999998888877765432211 111111122333222222222 12233556678899999999888889999
Q ss_pred HHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 327 PMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 327 Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
.+|++++.+++++++-+.....++.+|+.|-.+-...+
T Consensus 139 tvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE 176 (347)
T KOG1442|consen 139 TVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQE 176 (347)
T ss_pred hhHHHHhHHhhcccccccccceeehhheehheeccccc
Confidence 99999999999999999999999999999977655443
No 104
>PRK11715 inner membrane protein; Provisional
Probab=65.24 E-value=1.5e+02 Score=29.58 Aligned_cols=45 Identities=11% Similarity=0.099 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHH
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVISV 270 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 270 (366)
|.++..+.-+.+-+.=++.|+ +.+|++.....+..+...++++++
T Consensus 307 giLFI~LTF~~fFlfE~~~~~---~iHpiQYlLVGlAl~lFYLLLLSl 351 (436)
T PRK11715 307 AILFIALTFAAFFLFELLKKL---RIHPVQYLLVGLALVLFYLLLLSL 351 (436)
T ss_pred HHHHHHHHHHHHHHHHHhcCc---eecHHHHHHHHHHHHHHHHHHHHH
Confidence 667666666655555555443 688998776666666555555554
No 105
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=62.50 E-value=1.5e+02 Score=28.54 Aligned_cols=245 Identities=13% Similarity=0.100 Sum_probs=135.5
Q ss_pred hHHHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhC-CCC------CCChhHHHHHHHHHHH
Q 017782 114 MLLEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQG-RKL------PSGFNAWVSIFLFALV 186 (366)
Q Consensus 114 ~~~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~-~~~------~~~~~~~~~~~~~g~l 186 (366)
-..|+++-.++.++=|+.++-.|.. ++.+ .|....=..+-.-+++|+....- .+. ..+.+......+.|++
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~l 82 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVL 82 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHH
Confidence 4678888999999999999888854 3322 23222223333444555443321 110 1223456666777777
Q ss_pred HHHHHHHHHHHHhhccccccccc-------------c------------------------------------------c
Q 017782 187 DASCFQGFLAQGLQRTSAGLGSA-------------P------------------------------------------A 211 (366)
Q Consensus 187 ~~~~~~~~~~~al~~~~~~~a~~-------------P------------------------------------------~ 211 (366)
...+.. .|=.+++|+..+...- | .
T Consensus 83 WGIGgl-tfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~ 161 (344)
T PF06379_consen 83 WGIGGL-TFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKE 161 (344)
T ss_pred Hhcchh-hHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhh
Confidence 654444 5566666655544322 1 0
Q ss_pred c-cCCCCccchHHHHHHHHHHHHHHHHHHHHHH---h-----hcCCChHH----HHHHHHHHHHHHHHHHHHHhcC--CC
Q 017782 212 F-DESNSSLWGSGEWWMLLAAQSMAVGTVMVRW---V-----SKYSDPVM----ATGWHMVIGGLPLMVISVLNHD--PV 276 (366)
Q Consensus 212 ~-~~~~~~~~~~G~l~allaa~~~a~~~v~~r~---~-----~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~--~~ 276 (366)
. ....+..+.+|.++++++.+.-|...+-... + ....++.. .....+..+.+.-+.++++... ..
T Consensus 162 ~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~ 241 (344)
T PF06379_consen 162 LGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLILLAKNKN 241 (344)
T ss_pred hccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhcCC
Confidence 0 1112234568999999999888877765532 1 11122321 2233344555555566554311 11
Q ss_pred c--ccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----hhhHHHhhhhHHHHHHHHHHHHhCCC------
Q 017782 277 Y--GESVK---ELTSSDILALLYTSIFGSAISYGVYFYSATKGS----LTKLSSLTFLTPMFASIFGFLYLGET------ 341 (366)
Q Consensus 277 ~--~~~~~---~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~~~----a~~~s~~~~l~Pv~a~i~~~l~lgE~------ 341 (366)
+ ..+.. +.-..+....+..|++ -...+++|-++-.+++ ..--.+++.+..+++-++|++ ++|.
T Consensus 242 ~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkEWKg~s~k 319 (344)
T PF06379_consen 242 WSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LKEWKGASKK 319 (344)
T ss_pred CccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HHHhccCCcc
Confidence 1 01111 1112344444444533 3456777777777666 445567888899999999966 5664
Q ss_pred CChhHHHHHHHHHHHHHHhccc
Q 017782 342 FSPLQLVGAAVTVVAIYLVNFR 363 (366)
Q Consensus 342 ~~~~~~vG~~lIl~g~~l~~~~ 363 (366)
.-..-++|.++++.++.++-..
T Consensus 320 t~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 320 TIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred cHHHHHHHHHHHHHHHHHHhcc
Confidence 3345688999999988887653
No 106
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=59.41 E-value=1.2e+02 Score=26.50 Aligned_cols=28 Identities=25% Similarity=0.555 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 017782 288 DILALLYTSIFGSAISYGVYFYSATKGS 315 (366)
Q Consensus 288 ~~~~ll~~gv~~~~l~~~l~~~al~~~~ 315 (366)
.++.++..|+++++..|.+|.+++++..
T Consensus 126 GlItlll~a~vgGfamy~my~y~yr~~a 153 (226)
T COG4858 126 GLITLLLTAVVGGFAMYIMYYYAYRMRA 153 (226)
T ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 3444455555555555555555555443
No 107
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=58.45 E-value=1e+02 Score=25.19 Aligned_cols=77 Identities=13% Similarity=-0.011 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 017782 116 LEWAVLVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFL 195 (366)
Q Consensus 116 ~g~l~llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 195 (366)
.++++++++.++-+...++.|...++.+..+..... ...+. .. ......+..|+......+.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~--~~~~~----~~----------~~p~~~i~lgl~~~~la~~~w 65 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF--IAALL----AF----------GLALRAVLLGLAGYALSMLCW 65 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH--HHHHH----HH----------hccHHHHHHHHHHHHHHHHHH
Confidence 367888889899999999999888766544322211 00000 00 011225677788888888899
Q ss_pred HHHhhcccccccc
Q 017782 196 AQGLQRTSAGLGS 208 (366)
Q Consensus 196 ~~al~~~~~~~a~ 208 (366)
.+++++.+++.+.
T Consensus 66 ~~aL~~~~ls~Ay 78 (129)
T PRK02971 66 LKALRYLPLSRAY 78 (129)
T ss_pred HHHHHhCCcHHHH
Confidence 9999999886553
No 108
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=55.88 E-value=69 Score=30.31 Aligned_cols=118 Identities=13% Similarity=0.055 Sum_probs=65.2
Q ss_pred HHHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHh----CCC--C-C--------CChhHHHHHHHHHH
Q 017782 121 LVSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQ----GRK--L-P--------SGFNAWVSIFLFAL 185 (366)
Q Consensus 121 llla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~----~~~--~-~--------~~~~~~~~~~~~g~ 185 (366)
|+++++|||++....|++.++--..+...|-+.++.++...+.... ++. . | .++......++-|+
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 4678899999999999876654444557777777776665444332 211 1 1 12223333444455
Q ss_pred HHHHHHHHHHHHHhhccccccccc--------------ccccCC--CCccchHHHHHHHHHHHHHHHHHH
Q 017782 186 VDASCFQGFLAQGLQRTSAGLGSA--------------PAFDES--NSSLWGSGEWWMLLAAQSMAVGTV 239 (366)
Q Consensus 186 l~~~~~~~~~~~al~~~~~~~a~~--------------P~~~~~--~~~~~~~G~l~allaa~~~a~~~v 239 (366)
+. .+...+.-+|+.....+.+-. =.+++. .......|..+.+++.++-+....
T Consensus 81 vf-nlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfld~~~n~a~iLF~GV~cf~iAI~lga~ah~ 149 (336)
T PF07168_consen 81 VF-NLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFLDPKINRAEILFPGVACFLIAIILGAAAHK 149 (336)
T ss_pred hh-hhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeeccCCCCCceEEEccHHHHHHHHHHHHHHHh
Confidence 44 334446666776655544332 012222 122334587777777766555544
No 109
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=55.39 E-value=3.9 Score=37.85 Aligned_cols=15 Identities=20% Similarity=0.674 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHH
Q 017782 114 MLLEWAVLVSPFFFW 128 (366)
Q Consensus 114 ~~~g~l~llla~~~~ 128 (366)
-..+.++++++.++|
T Consensus 25 l~~~~llll~ail~w 39 (381)
T PF05297_consen 25 LLFGLLLLLVAILVW 39 (381)
T ss_dssp ---------------
T ss_pred HHHHHHHHHHHHHHH
Confidence 356677777777777
No 110
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=47.46 E-value=2e+02 Score=25.28 Aligned_cols=20 Identities=10% Similarity=0.013 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 017782 224 EWWMLLAAQSMAVGTVMVRW 243 (366)
Q Consensus 224 ~l~allaa~~~a~~~v~~r~ 243 (366)
..+.+.+++..|+-..+-|+
T Consensus 196 i~l~IiGav~lalRfylkkk 215 (226)
T COG4858 196 IALTIIGAVILALRFYLKKK 215 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 45555666666666555554
No 111
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=42.86 E-value=3.8 Score=37.57 Aligned_cols=63 Identities=13% Similarity=0.242 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcc
Q 017782 300 SAISYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 300 ~~l~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
.+=+.++..+|.++.+-+.+..+..-..+...++.|++++.+-.+.++.|.++.++|+..+..
T Consensus 88 DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~ 150 (336)
T KOG2766|consen 88 DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVF 150 (336)
T ss_pred eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEE
Confidence 344777888999999999999999999999999999999999999999999999999877654
No 112
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=40.78 E-value=2.6e+02 Score=24.68 Aligned_cols=22 Identities=5% Similarity=0.066 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 017782 223 GEWWMLLAAQSMAVGTVMVRWV 244 (366)
Q Consensus 223 G~l~allaa~~~a~~~v~~r~~ 244 (366)
+....+++++.++++..+-||.
T Consensus 180 ~~~~iiig~i~~~~~~~lkkk~ 201 (206)
T PF06570_consen 180 PWVYIIIGVIAFALRFYLKKKY 201 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 5677788999999998887775
No 113
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=40.13 E-value=43 Score=27.41 Aligned_cols=46 Identities=24% Similarity=0.366 Sum_probs=28.9
Q ss_pred CChhhHHHhhhhHHHHHHHHHHHHhCCCC---ChhHHHHHHHHHHHHHHh
Q 017782 314 GSLTKLSSLTFLTPMFASIFGFLYLGETF---SPLQLVGAAVTVVAIYLV 360 (366)
Q Consensus 314 ~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~---~~~~~vG~~lIl~g~~l~ 360 (366)
....+.+.+.|+.|+++++++.++. ..+ ++..++++.+.++..++.
T Consensus 65 ~~~~~aa~l~Y~lPll~li~g~~l~-~~~~~~e~~~~l~~l~~l~~~~~~ 113 (135)
T PF04246_consen 65 SSLLKAAFLVYLLPLLALIAGAVLG-SYLGGSELWAILGGLLGLALGFLI 113 (135)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455678888999999988887763 222 455555555444444443
No 114
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.35 E-value=1.8e+02 Score=24.47 Aligned_cols=73 Identities=8% Similarity=-0.013 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCcC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--hhHHHHHHHHHHHH
Q 017782 115 LLEWAVLVSPFFFWGTAMVAMKEVLPKAG-TFFVAAFRLIPAGLLLITFASSQGRKLPSG--FNAWVSIFLFALVD 187 (366)
Q Consensus 115 ~~g~l~llla~~~~g~~~~~~k~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~--~~~~~~~~~~g~l~ 187 (366)
...++..+++..+-.......-.+.+..+ |....++.+..+.+++..+.+.+.+..... .+..++.+.-|+++
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG 79 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG 79 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh
Confidence 34555666666666666666555555554 999999999999988887776644332222 23344555555544
No 115
>COG1968 BacA Undecaprenyl pyrophosphate phosphatase [Lipid transport and metabolism]
Probab=35.20 E-value=3.8e+02 Score=25.00 Aligned_cols=69 Identities=16% Similarity=0.127 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhhcC--cCHHHHHHHHHHHHHHHHHHHHHHhCCCCC--CChhHHHHHHHHHHH
Q 017782 117 EWAVLVSPFFFWGTAMVAMKEVLPK--AGTFFVAAFRLIPAGLLLITFASSQGRKLP--SGFNAWVSIFLFALV 186 (366)
Q Consensus 117 g~l~llla~~~~g~~~~~~k~~~~~--~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~--~~~~~~~~~~~~g~l 186 (366)
-.+..+++++.-+..+++.|-..+. .+|. ...+-+++..++++..=...+++.. .+.-.++-.+..|+.
T Consensus 86 l~l~ilvatiPa~v~Gl~~~d~i~~~l~~~~-~va~~lIv~gi~li~~e~~~~~~~~~~~~~l~~~da~~IGla 158 (270)
T COG1968 86 LWLKILVATIPAVVLGLLFKDFIKSHLFNPR-VVAIALIVGGILLILAEKLNKKPRLRDLDDLTLRDALIIGLA 158 (270)
T ss_pred HHHHHHHHHHhHHHhhHHHHHHHHHHccChH-HHHHHHHHHHHHHHHHHHhccccCcCChhhCCHHHHHHHHHH
Confidence 3455666666666667777654442 3444 4444445545444443333332122 222345556666654
No 116
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=34.90 E-value=5.2e+02 Score=26.50 Aligned_cols=18 Identities=22% Similarity=0.246 Sum_probs=10.9
Q ss_pred HHhhhhHHHHHHHHHHHH
Q 017782 320 SSLTFLTPMFASIFGFLY 337 (366)
Q Consensus 320 s~~~~l~Pv~a~i~~~l~ 337 (366)
.......|+-+.++|++.
T Consensus 350 ~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 350 MVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344455677677777664
No 117
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=34.69 E-value=55 Score=19.51 Aligned_cols=24 Identities=25% Similarity=0.151 Sum_probs=14.7
Q ss_pred CChhHHHHHHHHHHHHHHhcccCC
Q 017782 342 FSPLQLVGAAVTVVAIYLVNFRGS 365 (366)
Q Consensus 342 ~~~~~~vG~~lIl~g~~l~~~~~~ 365 (366)
-.+..++|.+++.++.++..++++
T Consensus 10 ~~~~~~~G~~l~~~~~~~~~~rk~ 33 (34)
T TIGR01167 10 NSLLLLLGLLLLGLGGLLLRKRKK 33 (34)
T ss_pred cHHHHHHHHHHHHHHHHHheeccc
Confidence 345567777666666666555554
No 118
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=33.11 E-value=97 Score=24.79 Aligned_cols=70 Identities=10% Similarity=-0.033 Sum_probs=38.9
Q ss_pred HHHHHHHhhHHHHHHHhhcCcCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017782 122 VSPFFFWGTAMVAMKEVLPKAGTFFVAAFRLIPAGLLLITFASSQGRKLPSGFNAWVSIFLFALVDASCFQGFLAQGLQR 201 (366)
Q Consensus 122 lla~~~~g~~~~~~k~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~ 201 (366)
++..++||.+.+++|....+.++..-.. |..-.... ++ .+|...+ ..+..-.....|++.+.+
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~----Ll----------~n~~y~i--pf~lNq~GSv~f~~~L~~ 64 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKF----LL----------LNPKYII--PFLLNQSGSVLFFLLLGS 64 (113)
T ss_pred eeehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHH----HH----------HhHHHHH--HHHHHHHHHHHHHHHHhc
Confidence 4567899999999998877655443331 32211111 10 1222222 232233344578889998
Q ss_pred ccccccc
Q 017782 202 TSAGLGS 208 (366)
Q Consensus 202 ~~~~~a~ 208 (366)
.+.+.+.
T Consensus 65 ~dlSlav 71 (113)
T PF10639_consen 65 ADLSLAV 71 (113)
T ss_pred CCceeee
Confidence 8886553
No 119
>COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) [Signal transduction mechanisms]
Probab=32.29 E-value=3.2e+02 Score=23.33 Aligned_cols=57 Identities=14% Similarity=0.198 Sum_probs=40.0
Q ss_pred HHHHHHHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCC-CChhHHHHHHHHHHHHHH
Q 017782 303 SYGVYFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGET-FSPLQLVGAAVTVVAIYL 359 (366)
Q Consensus 303 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~-~~~~~~vG~~lIl~g~~l 359 (366)
+|..|.+.-....+-....+..++-+....+..++++++ +....+.|..+-+..+++
T Consensus 64 a~lvW~~~~~~~~~~~~~~ly~~ql~ln~awspiff~l~~l~~a~i~~lll~~~vl~l 121 (161)
T COG3476 64 AYLVWEKGPGQGTSWLLMFLYLLQLILNFAWSPIFFGLRSLGAALIIILLLWIAVLVL 121 (161)
T ss_pred HHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHH
Confidence 566666665555544444444589999999999999985 888888877765554444
No 120
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=30.73 E-value=89 Score=26.14 Aligned_cols=24 Identities=25% Similarity=0.454 Sum_probs=18.4
Q ss_pred CChhhHHHhhhhHHHHHHHHHHHH
Q 017782 314 GSLTKLSSLTFLTPMFASIFGFLY 337 (366)
Q Consensus 314 ~~a~~~s~~~~l~Pv~a~i~~~l~ 337 (366)
-+.-+.+.+.|+.|.++++++.++
T Consensus 72 kslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 72 KSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 355677888888898888887666
No 121
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=30.40 E-value=15 Score=34.56 Aligned_cols=131 Identities=10% Similarity=0.111 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHH-HHHHhcC--------CCcccccccCCHHHHHHHHHHHHH
Q 017782 228 LLAAQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMV-ISVLNHD--------PVYGESVKELTSSDILALLYTSIF 298 (366)
Q Consensus 228 llaa~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~--------~~~~~~~~~~~~~~~~~ll~~gv~ 298 (366)
+++.+||+-+-...|...++-...+.+.|-+.++.++..+ +++-.+. +.+..+....++..+...+.-| +
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG-v 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG-V 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh-H
Confidence 4566777777777766654333223344555554443332 3333222 2222233333444444444444 4
Q ss_pred HHHHHHHHHHHHhccCChhhHHHhhh-hHHHHHHHHHHHHhCCCCC--hhHHHHHHHHHHHHHHh
Q 017782 299 GSAISYGVYFYSATKGSLTKLSSLTF-LTPMFASIFGFLYLGETFS--PLQLVGAAVTVVAIYLV 360 (366)
Q Consensus 299 ~~~l~~~l~~~al~~~~a~~~s~~~~-l~Pv~a~i~~~l~lgE~~~--~~~~vG~~lIl~g~~l~ 360 (366)
..-++..+..+++...+.+++-++.. +..|+++++-|+. ..+.+ ..-+.|.+++++++++-
T Consensus 81 vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lg 144 (336)
T PF07168_consen 81 VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILG 144 (336)
T ss_pred hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHH
Confidence 45668889899888887776655442 3445566666654 45554 35677888888888764
No 122
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=28.41 E-value=3.4e+02 Score=24.75 Aligned_cols=57 Identities=14% Similarity=0.169 Sum_probs=52.5
Q ss_pred HHHhccCChhhHHHhhhhHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 308 FYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 308 ~~al~~~~a~~~s~~~~l~Pv~a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
.+++++++...-+++-++..+..+..-.+++|.+.+-.+.....+.+.+.+...+.+
T Consensus 86 SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D 142 (309)
T COG5070 86 SKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGD 142 (309)
T ss_pred ccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccch
Confidence 678999999999999999999999999999999999999999999888888877765
No 123
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=28.03 E-value=8.2e+02 Score=26.69 Aligned_cols=16 Identities=19% Similarity=0.474 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 017782 253 ATGWHMVIGGLPLMVI 268 (366)
Q Consensus 253 ~~~~~~~~~~v~~~~~ 268 (366)
...|.+++|.++.+++
T Consensus 207 ~~L~~i~~GiliG~vv 222 (810)
T TIGR00844 207 TILWECIFGSILGCII 222 (810)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555554444433
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=26.83 E-value=8.3e+02 Score=26.35 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHH
Q 017782 231 AQSMAVGTVMVRWVSKYSDPVMATGWHMVIGGLPLMVIS 269 (366)
Q Consensus 231 a~~~a~~~v~~r~~~~~~~~~~~~~~~~~~~~v~~~~~~ 269 (366)
++..-...++...+..+......+...++++++.++++.
T Consensus 605 ~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~ 643 (742)
T TIGR01299 605 TLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLS 643 (742)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 333333444444433334443444444555555544443
No 125
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=23.80 E-value=3e+02 Score=21.48 Aligned_cols=21 Identities=19% Similarity=0.322 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 017782 252 MATGWHMVIGGLPLMVISVLN 272 (366)
Q Consensus 252 ~~~~~~~~~~~v~~~~~~~~~ 272 (366)
..+.+++++..++.+.+..+.
T Consensus 46 g~IG~~~v~pil~G~~lG~WL 66 (100)
T TIGR02230 46 GLIGWSVAIPTLLGVAVGIWL 66 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555544444443
No 126
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=22.22 E-value=8.2e+02 Score=24.71 Aligned_cols=45 Identities=7% Similarity=-0.119 Sum_probs=30.0
Q ss_pred hHHHhhhhHHHHHHHHHHHHhCC-----CCChhHHHHHHHHHHHHHHhcc
Q 017782 318 KLSSLTFLTPMFASIFGFLYLGE-----TFSPLQLVGAAVTVVAIYLVNF 362 (366)
Q Consensus 318 ~~s~~~~l~Pv~a~i~~~l~lgE-----~~~~~~~vG~~lIl~g~~l~~~ 362 (366)
...++..+.-+.=+++-++=-.+ -++..|++...++++|++++.+
T Consensus 225 lf~lYli~Ygi~RF~iEflR~d~~~~~~gl~~~Q~lSl~~il~gl~~~~~ 274 (460)
T PRK13108 225 LFGFYVAFYCAGRFCVELLRDDPATLIAGIRINSFTSTFVFIGAVVYIIL 274 (460)
T ss_pred HHHHHHHHHHHHHHHhhhhccCchhhhcCccHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555442222 2788999999999999888764
No 127
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=21.33 E-value=2.1e+02 Score=25.18 Aligned_cols=20 Identities=10% Similarity=-0.049 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHhhHHHHHH
Q 017782 117 EWAVLVSPFFFWGTAMVAMK 136 (366)
Q Consensus 117 g~l~llla~~~~g~~~~~~k 136 (366)
|+..+++.+++.|.......
T Consensus 112 gi~tli~~~i~~G~~~~~~~ 131 (206)
T PF06570_consen 112 GIITLILVSIVGGLVFYFIF 131 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 66666666666665555444
No 128
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=20.65 E-value=1.4e+02 Score=25.13 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=15.2
Q ss_pred ChhhHHHhhhhHHHHHHHHHHHH
Q 017782 315 SLTKLSSLTFLTPMFASIFGFLY 337 (366)
Q Consensus 315 ~a~~~s~~~~l~Pv~a~i~~~l~ 337 (366)
...+.+.+.|+-|+++++.+..+
T Consensus 73 ~llkaa~lvYllPLl~li~ga~l 95 (154)
T PRK10862 73 SLLRSALLVYMTPLVGLFLGAAL 95 (154)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677777787777766544
No 129
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=20.38 E-value=67 Score=30.03 Aligned_cols=105 Identities=10% Similarity=0.074 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CChhhHHHhhhhHHHH
Q 017782 251 VMATGWHMVIGGLPLMVISVLNHDPVYGESVKELTSSDILALLYTSIFGSAISYGVYFYSATK-GSLTKLSSLTFLTPMF 329 (366)
Q Consensus 251 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~gv~~~~l~~~l~~~al~~-~~a~~~s~~~~l~Pv~ 329 (366)
..+++-++++-++..++.. .... ......+.+++..++.+ ..+...+.++|++. ++.-.--++..-.++.
T Consensus 34 NLITFaqFlFia~eGlif~----skf~-~~k~kiplk~Y~i~V~m----FF~vnv~NN~al~f~I~~PlHiIfRsgsll~ 104 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFT----SKFF-TVKPKIPLKDYAITVAM----FFIVNVTNNYALKFNIPMPLHIIFRSGSLLA 104 (330)
T ss_pred eehHHHHHHHHHHhceeee----cccc-ccCCCCchhhhheehhe----eeeeeeeccceeeecccceEEEEEecCcHHH
Confidence 4566677776666555443 1111 11134445566544422 23456778999885 6666677788889999
Q ss_pred HHHHHHHHhCCCCChhHHHHHHHHHHHHHHhcccC
Q 017782 330 ASIFGFLYLGETFSPLQLVGAAVTVVAIYLVNFRG 364 (366)
Q Consensus 330 a~i~~~l~lgE~~~~~~~vG~~lIl~g~~l~~~~~ 364 (366)
.++++|++.|.+-+..|+....++-.|+++....+
T Consensus 105 nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s 139 (330)
T KOG1583|consen 105 NMILGWILLGKRYSLRQYSSVLMITIGIIICTLFS 139 (330)
T ss_pred HHHHHHHhccceeehhhhhhHHhhhhhheeEEeec
Confidence 99999999999999999999999999999876543
Done!