Query 017784
Match_columns 366
No_of_seqs 95 out of 107
Neff 2.2
Searched_HMMs 29240
Date Mon Mar 25 04:53:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f62_A Transcription factor WS 98.9 6.6E-10 2.3E-14 78.1 3.2 49 3-53 1-49 (51)
2 2ku3_A Bromodomain-containing 98.8 7.8E-10 2.7E-14 84.5 0.7 50 2-55 16-67 (71)
3 2e6r_A Jumonji/ARID domain-con 98.7 3.6E-09 1.2E-13 83.6 2.9 50 3-54 17-66 (92)
4 2lri_C Autoimmune regulator; Z 98.7 5.8E-09 2E-13 78.7 3.5 47 3-54 13-59 (66)
5 1wev_A Riken cDNA 1110020M19; 98.7 5.8E-09 2E-13 81.7 3.0 53 2-55 16-73 (88)
6 2l43_A N-teminal domain from h 98.7 3.6E-09 1.2E-13 83.2 1.7 49 2-54 25-75 (88)
7 1mm2_A MI2-beta; PHD, zinc fin 98.7 1.9E-08 6.5E-13 74.0 4.8 51 2-57 9-59 (61)
8 2e6s_A E3 ubiquitin-protein li 98.7 1.7E-08 5.7E-13 78.1 4.7 48 4-53 28-76 (77)
9 3shb_A E3 ubiquitin-protein li 98.6 2.3E-08 8E-13 77.6 4.3 48 4-53 28-76 (77)
10 3asl_A E3 ubiquitin-protein li 98.6 3.6E-08 1.2E-12 74.7 4.6 49 4-54 20-69 (70)
11 3v43_A Histone acetyltransfera 98.6 4E-08 1.4E-12 78.9 4.5 49 3-53 62-111 (112)
12 2yt5_A Metal-response element- 98.6 2.2E-08 7.6E-13 73.1 2.6 51 2-54 6-61 (66)
13 2ysm_A Myeloid/lymphoid or mix 98.6 4.4E-08 1.5E-12 77.7 4.3 50 4-55 56-105 (111)
14 1xwh_A Autoimmune regulator; P 98.5 2.8E-08 9.6E-13 73.8 2.7 49 2-55 8-56 (66)
15 2yql_A PHD finger protein 21A; 98.5 4.2E-08 1.4E-12 70.6 3.0 47 2-53 9-55 (56)
16 2kwj_A Zinc finger protein DPF 98.5 5E-08 1.7E-12 78.7 3.5 49 4-54 60-108 (114)
17 1fp0_A KAP-1 corepressor; PHD 98.5 1.3E-07 4.3E-12 75.8 5.5 47 3-54 26-72 (88)
18 2puy_A PHD finger protein 21A; 98.4 8.4E-08 2.9E-12 69.7 3.0 48 2-54 5-52 (60)
19 2l5u_A Chromodomain-helicase-D 98.4 8.4E-08 2.9E-12 70.5 3.0 47 3-54 12-58 (61)
20 2k16_A Transcription initiatio 98.4 7.4E-08 2.5E-12 72.1 2.4 51 3-55 19-69 (75)
21 3o36_A Transcription intermedi 98.4 1.3E-07 4.6E-12 80.3 4.0 48 3-55 5-52 (184)
22 3u5n_A E3 ubiquitin-protein li 98.4 1.2E-07 4.2E-12 82.2 3.7 47 3-54 8-54 (207)
23 2lv9_A Histone-lysine N-methyl 98.3 5E-07 1.7E-11 71.8 4.7 48 3-54 29-76 (98)
24 2ro1_A Transcription intermedi 98.3 3.3E-07 1.1E-11 79.5 3.8 48 3-55 3-50 (189)
25 2ysm_A Myeloid/lymphoid or mix 98.1 2E-06 6.9E-11 68.1 4.0 49 2-52 7-55 (111)
26 1wen_A Inhibitor of growth fam 97.8 3.8E-05 1.3E-09 58.4 5.5 48 3-55 17-66 (71)
27 4gne_A Histone-lysine N-methyl 97.7 2.2E-05 7.7E-10 64.3 3.5 46 2-54 15-62 (107)
28 2vnf_A ING 4, P29ING4, inhibit 97.6 1.7E-05 5.8E-10 58.3 2.1 47 4-54 11-59 (60)
29 1weu_A Inhibitor of growth fam 97.6 4.7E-05 1.6E-09 61.0 4.7 48 3-55 37-86 (91)
30 3c6w_A P28ING5, inhibitor of g 97.6 2.2E-05 7.6E-10 57.8 2.1 46 5-54 11-58 (59)
31 2jmi_A Protein YNG1, ING1 homo 97.5 6.6E-05 2.3E-09 60.1 3.6 44 4-52 28-74 (90)
32 1we9_A PHD finger family prote 97.3 0.00015 5.3E-09 52.6 3.7 54 2-56 6-60 (64)
33 2g6q_A Inhibitor of growth pro 97.3 8.1E-05 2.8E-09 55.3 2.2 46 5-54 13-60 (62)
34 3o70_A PHD finger protein 13; 97.3 0.00016 5.4E-09 54.5 3.4 47 3-53 20-66 (68)
35 3v43_A Histone acetyltransfera 97.2 3.7E-05 1.3E-09 61.6 -0.7 50 2-52 5-62 (112)
36 1wee_A PHD finger family prote 97.2 0.00014 4.7E-09 54.4 2.3 49 3-54 17-66 (72)
37 1wew_A DNA-binding family prot 97.0 0.00027 9.3E-09 53.8 2.6 52 3-56 17-74 (78)
38 2ri7_A Nucleosome-remodeling f 96.9 0.00011 3.8E-09 61.5 -0.8 50 3-54 9-59 (174)
39 1x4i_A Inhibitor of growth pro 96.8 0.00048 1.7E-08 52.2 2.4 47 4-54 7-55 (70)
40 2kwj_A Zinc finger protein DPF 96.8 0.0004 1.4E-08 55.9 1.8 50 2-52 1-59 (114)
41 3o7a_A PHD finger protein 13 v 96.7 0.00076 2.6E-08 47.8 2.6 48 3-53 4-51 (52)
42 1wep_A PHF8; structural genomi 96.6 0.00088 3E-08 50.8 2.1 51 4-55 13-64 (79)
43 3kqi_A GRC5, PHD finger protei 96.3 0.00075 2.6E-08 50.9 0.4 52 3-55 10-62 (75)
44 2rsd_A E3 SUMO-protein ligase 96.2 0.0017 5.9E-08 48.2 1.9 50 4-54 11-65 (68)
45 1wem_A Death associated transc 96.2 0.00076 2.6E-08 50.6 -0.2 50 4-54 17-70 (76)
46 2xb1_A Pygopus homolog 2, B-ce 95.7 0.0031 1.1E-07 50.7 1.4 54 2-56 3-63 (105)
47 2lbm_A Transcriptional regulat 95.6 0.0027 9.4E-08 54.4 1.0 48 3-54 64-117 (142)
48 2kgg_A Histone demethylase jar 95.5 0.0037 1.3E-07 44.3 1.1 47 4-52 4-52 (52)
49 2vpb_A Hpygo1, pygopus homolog 94.5 0.0052 1.8E-07 46.1 -0.5 50 2-52 8-64 (65)
50 3kv5_D JMJC domain-containing 93.8 0.0099 3.4E-07 58.7 -0.2 51 3-54 37-88 (488)
51 4bbq_A Lysine-specific demethy 93.8 0.034 1.2E-06 43.9 2.9 42 12-54 70-114 (117)
52 3kv4_A PHD finger protein 8; e 93.8 0.0056 1.9E-07 60.2 -2.1 54 2-56 4-58 (447)
53 3pur_A Lysine-specific demethy 93.3 0.028 9.6E-07 56.9 2.0 51 3-54 13-94 (528)
54 3ql9_A Transcriptional regulat 93.3 0.0086 2.9E-07 50.7 -1.4 48 3-54 58-111 (129)
55 3lqh_A Histone-lysine N-methyl 90.8 0.19 6.6E-06 44.1 4.0 51 3-54 3-63 (183)
56 1wil_A KIAA1045 protein; ring 84.5 0.39 1.3E-05 39.3 1.8 59 3-63 16-85 (89)
57 2yuu_A NPKC-delta, protein kin 82.8 1.7 5.8E-05 33.0 4.7 35 2-37 28-64 (83)
58 1weq_A PHD finger protein 7; s 81.0 1.3 4.3E-05 35.5 3.5 35 14-52 43-77 (85)
59 2ku7_A MLL1 PHD3-CYP33 RRM chi 74.4 1.7 5.7E-05 33.2 2.4 37 17-54 2-44 (140)
60 1weo_A Cellulose synthase, cat 66.6 1.1 3.7E-05 36.9 -0.3 50 2-56 16-69 (93)
61 4bbq_A Lysine-specific demethy 59.0 1.3 4.3E-05 34.8 -1.1 37 3-55 8-44 (117)
62 4gne_A Histone-lysine N-methyl 58.8 8.2 0.00028 31.4 3.6 43 4-54 60-102 (107)
63 4b6d_A RAC GTPase-activating p 58.7 5.2 0.00018 29.4 2.2 34 3-37 20-54 (61)
64 1ptq_A Protein kinase C delta 58.2 5 0.00017 27.1 1.9 35 2-37 11-47 (50)
65 1kbe_A Kinase suppressor of RA 56.4 5.3 0.00018 28.6 1.9 33 2-37 14-46 (49)
66 2enz_A NPKC-theta, protein kin 56.1 8.5 0.00029 27.7 3.0 35 2-37 23-59 (65)
67 2enn_A NPKC-theta, protein kin 54.8 8 0.00027 29.0 2.7 35 2-37 34-70 (77)
68 3uej_A NPKC-delta, protein kin 54.2 5.6 0.00019 28.6 1.7 35 2-37 20-56 (65)
69 2eli_A Protein kinase C alpha 51.5 13 0.00046 28.2 3.5 35 2-37 28-64 (85)
70 1faq_A RAF-1; transferase, ser 49.0 10 0.00036 25.7 2.4 33 2-37 14-46 (52)
71 1v5n_A PDI-like hypothetical p 48.7 7.8 0.00027 30.1 1.9 32 3-36 48-79 (89)
72 2od1_A Protein CBFA2T1; zinc f 47.6 12 0.0004 26.8 2.5 27 2-35 13-39 (60)
73 2ct0_A Non-SMC element 1 homol 46.9 11 0.00038 28.7 2.4 48 2-55 15-62 (74)
74 2dj8_A Protein CBFA2T1; zinc f 46.6 13 0.00043 26.6 2.5 26 3-35 16-41 (60)
75 3nw0_A Non-structural maintena 45.9 6.1 0.00021 35.4 1.0 47 2-54 180-226 (238)
76 2jw6_A Deformed epidermal auto 45.3 11 0.00038 25.7 2.0 27 2-35 9-35 (52)
77 2jrp_A Putative cytoplasmic pr 41.4 12 0.0004 29.8 1.9 41 1-56 1-42 (81)
78 1y8f_A UNC-13 homolog A, MUNC1 39.8 7 0.00024 28.3 0.3 35 2-37 24-60 (66)
79 1vyx_A ORF K3, K3RING; zinc-bi 38.8 2.3 7.7E-05 30.8 -2.4 49 2-54 6-56 (60)
80 2dmi_A Teashirt homolog 3; zin 38.5 35 0.0012 24.6 4.0 10 43-52 78-87 (115)
81 2odd_A Protein CBFA2T1; MYND z 38.1 20 0.00069 25.6 2.5 26 3-35 18-43 (64)
82 2db6_A SH3 and cysteine rich d 36.8 6.9 0.00024 29.1 -0.1 35 2-37 28-64 (74)
83 2yrc_A Protein transport prote 33.0 20 0.00069 26.5 1.9 44 9-59 1-47 (59)
84 2d8q_A BLU protein, zinc finge 28.5 30 0.001 25.7 2.2 27 2-35 15-41 (70)
85 2pv0_B DNA (cytosine-5)-methyl 27.5 8.3 0.00029 37.8 -1.3 45 3-54 94-148 (386)
86 2jne_A Hypothetical protein YF 27.0 21 0.00071 29.7 1.2 25 1-25 31-56 (101)
87 3pfq_A PKC-B, PKC-beta, protei 26.4 40 0.0014 33.2 3.2 34 3-37 114-149 (674)
88 2bpt_B Nucleoporin NUP1; nucle 26.0 15 0.00052 25.8 0.2 15 310-324 9-23 (39)
89 2ctu_A Zinc finger protein 483 24.5 16 0.00054 24.0 -0.0 34 14-54 15-48 (73)
90 4b2u_A S67; toxin, ICK; NMR {S 23.4 26 0.00088 24.4 0.9 25 30-54 2-27 (36)
91 3a1b_A DNA (cytosine-5)-methyl 22.8 22 0.00076 31.2 0.6 45 3-54 80-134 (159)
92 2jun_A Midline-1; B-BOX, TRIM, 22.3 53 0.0018 24.4 2.5 21 3-23 4-24 (101)
93 3dzy_D Peroxisome proliferator 21.7 16 0.00055 34.7 -0.6 51 2-54 50-110 (419)
94 3pfq_A PKC-B, PKC-beta, protei 21.4 30 0.001 34.1 1.3 33 3-36 49-83 (674)
95 2fnf_X Putative RAS effector N 20.9 44 0.0015 24.9 1.8 34 2-37 35-68 (72)
96 3rsn_A SET1/ASH2 histone methy 20.1 73 0.0025 28.2 3.3 45 7-53 9-58 (177)
No 1
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.90 E-value=6.6e-10 Score=78.06 Aligned_cols=49 Identities=35% Similarity=0.808 Sum_probs=42.6
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEP 53 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqs 53 (366)
..|.+||+.|.++.|+.|+.|.. +.|.||+++. ...+|.+.|+|..|..
T Consensus 1 a~C~vC~~~~~~~~ll~Cd~C~~-~~H~~Cl~p~-l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 1 ARCKVCRKKGEDDKLILCDECNK-AFHLFCLRPA-LYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCCTTTCCSSCCSCCEECTTTCC-EECHHHHCTT-CCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCCEEECCCCCh-hhCcccCCCC-cCCCCCCcEECcCccc
Confidence 36999999999999999999997 6999999873 3357789999999975
No 2
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.79 E-value=7.8e-10 Score=84.46 Aligned_cols=50 Identities=28% Similarity=0.618 Sum_probs=43.5
Q ss_pred CcccccccccC--cccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 2 VTVCQQCGDKG--FYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 2 VtVCdICGDvG--FEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
..+|.+||+.+ .++.|++|++|+. +.|+||+++. .+|.+.|||..|....
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD~C~~-~~H~~Cl~~~---~vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCDMCNL-AVHQECYGVP---YIPEGQWLCRHCLQSR 67 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECSSSCC-EEEHHHHTCS---SCCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCC-ccccccCCCC---cCCCCCcCCccCcCcC
Confidence 46899999987 8899999999998 6999999983 3678999999998653
No 3
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.74 E-value=3.6e-09 Score=83.61 Aligned_cols=50 Identities=26% Similarity=0.608 Sum_probs=43.9
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
.+|.+|++.+.++.|+.|+.|.. +.|.||+++. ...+|.+.|+|..|...
T Consensus 17 ~~C~vC~~~~~~~~ll~CD~C~~-~~H~~Cl~Pp-l~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 17 YICQVCSRGDEDDKLLFCDGCDD-NYHIFCLLPP-LPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCSSSCCSGGGGGCEECTTTCC-EECSSSSSSC-CSSCCSSCCCCHHHHHH
T ss_pred CCCccCCCcCCCCCEEEcCCCCc-hhccccCCCC-cccCCCCCcCCccCcCc
Confidence 57999999999999999999998 6999999973 33577899999999864
No 4
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.72 E-value=5.8e-09 Score=78.68 Aligned_cols=47 Identities=23% Similarity=0.540 Sum_probs=39.4
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
..|.+||+.| .|+.|+.|.. +.|.||++..+ ..+|.+.|||..|...
T Consensus 13 ~~C~vC~~~~---~ll~Cd~C~~-~~H~~Cl~P~l-~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 13 ARCGVCGDGT---DVLRCTHCAA-AFHWRCHFPAG-TSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCCTTTSCCT---TCEECSSSCC-EECHHHHCTTT-CCCCSSSCCCTTTTTC
T ss_pred CCcCCCCCCC---eEEECCCCCC-ceecccCCCcc-CcCCCCCEECccccCC
Confidence 4699999876 4999999997 69999999843 4577899999999865
No 5
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.70 E-value=5.8e-09 Score=81.70 Aligned_cols=53 Identities=21% Similarity=0.607 Sum_probs=42.9
Q ss_pred CcccccccccCc--ccceeecCCCCCCCeeeccCCCCCCC---CCCCCccccccccCCc
Q 017784 2 VTVCQQCGDKGF--YEALIGCEKCQTTAVHIYCLPVLPAS---FEDDVLWYCEDCEPKV 55 (366)
Q Consensus 2 VtVCdICGDvGF--EElLv~CdkCrvgAEHTYCLdv~pve---fvppg~WfCEECqse~ 55 (366)
..+|.+|++... .+.|++|+.|+. +.|+||++.-+.. .++.+.|+|..|....
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~-~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHN-LYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCC-EEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCC-eEcCccCCCcccccccCCCCCCeeCccccchh
Confidence 458999998865 479999999998 6999999984321 2578999999998664
No 6
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.69 E-value=3.6e-09 Score=83.17 Aligned_cols=49 Identities=29% Similarity=0.644 Sum_probs=43.0
Q ss_pred CcccccccccC--cccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 2 VTVCQQCGDKG--FYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 2 VtVCdICGDvG--FEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
..+|.+||+.| .++.|++|+.|.. +.|.||+++. .+|.+.|||..|...
T Consensus 25 ~~~C~vC~~~~s~~~~~ll~CD~C~~-~fH~~Cl~p~---~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 25 DAVCSICMDGESQNSNVILFCDMCNL-AVHQECYGVP---YIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCSSCCSSSSCSEEEEEECSSSCC-CCCHHHHTCS---SCCSSCCCCHHHHHH
T ss_pred CCcCCcCCCCCCCCCCCEEECCCCCc-hhhcccCCCC---ccCCCceECccccCc
Confidence 35899999998 8889999999998 6999999994 367899999999865
No 7
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.67 E-value=1.9e-08 Score=74.00 Aligned_cols=51 Identities=29% Similarity=0.697 Sum_probs=41.3
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCcCC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKVAK 57 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~~k 57 (366)
...|.+||+.| .|+.|+.|.. +.|.||++.. ...+|.+.|+|..|.....+
T Consensus 9 ~~~C~vC~~~g---~ll~Cd~C~~-~fH~~Cl~pp-l~~~p~g~W~C~~C~~~~~k 59 (61)
T 1mm2_A 9 MEFCRVCKDGG---ELLCCDTCPS-SYHIHCLNPP-LPEIPNGEWLCPRCTCPALK 59 (61)
T ss_dssp CSSCTTTCCCS---SCBCCSSSCC-CBCSSSSSSC-CSSCCSSCCCCTTTTTTCCT
T ss_pred CCcCCCCCCCC---CEEEcCCCCH-HHcccccCCC-cCcCCCCccCChhhcCchhc
Confidence 35799999865 6999999998 6999999973 33477899999999876433
No 8
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=1.7e-08 Score=78.11 Aligned_cols=48 Identities=33% Similarity=0.820 Sum_probs=42.0
Q ss_pred ccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCC-ccccccccC
Q 017784 4 VCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDV-LWYCEDCEP 53 (366)
Q Consensus 4 VCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg-~WfCEECqs 53 (366)
+|.+||..+.++.|++|+.|.. +.|.||++.. ...+|.+ .|||..|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~-~yH~~Cl~Pp-l~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNV-AYHIYCLNPP-LDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCC-EEETTSSSSC-CSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCCCCc-cccccccCCC-ccCCCCCCCcCCcCccC
Confidence 6899999999999999999997 6999999973 3457788 999999975
No 9
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.62 E-value=2.3e-08 Score=77.57 Aligned_cols=48 Identities=33% Similarity=0.823 Sum_probs=41.6
Q ss_pred ccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCc-cccccccC
Q 017784 4 VCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVL-WYCEDCEP 53 (366)
Q Consensus 4 VCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~-WfCEECqs 53 (366)
.|.+||..+.++.|++|+.|.. +.|.||++.. ...+|.+. |+|..|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~-~yH~~Cl~Pp-L~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDM-AFHIYCLDPP-LSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCC-EEETTTSSSC-CSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCC-ccCcccCCCc-ccCCCCCCceECcCccc
Confidence 5999999999999999999998 6999999974 34577788 99999975
No 10
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.60 E-value=3.6e-08 Score=74.69 Aligned_cols=49 Identities=33% Similarity=0.818 Sum_probs=41.9
Q ss_pred ccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCC-ccccccccCC
Q 017784 4 VCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDV-LWYCEDCEPK 54 (366)
Q Consensus 4 VCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg-~WfCEECqse 54 (366)
.|.+||..+.++.|+.|+.|.. +.|.||++.. ...+|.+ .|+|..|..+
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~-~yH~~Cl~Pp-l~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDM-AFHIYCLDPP-LSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCC-EEEGGGSSSC-CSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCCEEEcCCCCC-ceecccCCCC-cCCCCCCCCcCCcCccCc
Confidence 5789999999999999999997 6999999973 3357778 9999999854
No 11
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.57 E-value=4e-08 Score=78.89 Aligned_cols=49 Identities=24% Similarity=0.725 Sum_probs=41.3
Q ss_pred cccccccccC-cccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccC
Q 017784 3 TVCQQCGDKG-FYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEP 53 (366)
Q Consensus 3 tVCdICGDvG-FEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqs 53 (366)
++|.+||+.| .++.|++|+.|.. +.|.||++..+ ..+|.+.|||..|+.
T Consensus 62 ~~C~vC~~~~~~~~~ll~Cd~C~~-~yH~~Cl~p~l-~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 62 KTCSSCRDQGKNADNMLFCDSCDR-GFHMECCDPPL-TRMPKGMWICQICRP 111 (112)
T ss_dssp CCBTTTCCCCCTTCCCEECTTTCC-EECGGGCSSCC-SSCCSSCCCCTTTSC
T ss_pred CccccccCcCCCccceEEcCCCCC-eeecccCCCCC-CCCCCCCeECCCCCC
Confidence 3799999986 4578999999997 69999998743 357889999999985
No 12
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.56 E-value=2.2e-08 Score=73.13 Aligned_cols=51 Identities=24% Similarity=0.590 Sum_probs=41.5
Q ss_pred Cccccccccc--CcccceeecCCCCCCCeeeccCCCCCCCC---CCCCccccccccCC
Q 017784 2 VTVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVLPASF---EDDVLWYCEDCEPK 54 (366)
Q Consensus 2 VtVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~pvef---vppg~WfCEECqse 54 (366)
..+|.+||+. ..++.|++|+.|.. +.|+||+++.+ .. .+.+.|||..|...
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~-~~H~~C~~p~l-~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQ-GYHQLCHTPHI-DSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCC-EEETTTSSSCC-CHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCh-HHHhhhCCCcc-cccccCCCCCEECCCCcCc
Confidence 3589999987 45699999999998 69999999832 22 26799999999865
No 13
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.55 E-value=4.4e-08 Score=77.69 Aligned_cols=50 Identities=26% Similarity=0.707 Sum_probs=43.6
Q ss_pred ccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 4 VCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 4 VCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
+|.+||..+.++.|++|+.|.. +.|.||++..+ ..+|.+.|+|..|..-.
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~~-~yH~~Cl~ppl-~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCDK-GYHTFCLQPVM-KSVPTNGWKCKNCRICI 105 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSCC-EEEGGGSSSCC-SSCCSSCCCCHHHHCCS
T ss_pred cccccCccCCCCCeeECCCCCc-HHhHHhcCCcc-ccCCCCCcCCcCCcCcC
Confidence 6999999999999999999998 69999999743 34778999999998653
No 14
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.54 E-value=2.8e-08 Score=73.78 Aligned_cols=49 Identities=31% Similarity=0.665 Sum_probs=40.6
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
...|.+||+.| .|+.|+.|.. +.|.||++.. ...+|.+.|+|..|....
T Consensus 8 ~~~C~vC~~~g---~ll~CD~C~~-~fH~~Cl~pp-l~~~P~g~W~C~~C~~~~ 56 (66)
T 1xwh_A 8 EDECAVCRDGG---ELICCDGCPR-AFHLACLSPP-LREIPSGTWRCSSCLQAT 56 (66)
T ss_dssp CCSBSSSSCCS---SCEECSSCCC-EECTTTSSSC-CSSCCSSCCCCHHHHHTC
T ss_pred CCCCccCCCCC---CEEEcCCCCh-hhcccccCCC-cCcCCCCCeECccccCcc
Confidence 35799999876 6999999998 6999999973 334678999999998653
No 15
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=4.2e-08 Score=70.64 Aligned_cols=47 Identities=26% Similarity=0.714 Sum_probs=39.1
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEP 53 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqs 53 (366)
...|.+||+.| .|+.|+.|.. +.|.||++.. ...+|.+.|+|..|..
T Consensus 9 ~~~C~vC~~~g---~ll~Cd~C~~-~~H~~Cl~pp-l~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 9 EDFCSVCRKSG---QLLMCDTCSR-VYHLDCLDPP-LKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCSCSSSCCSS---CCEECSSSSC-EECSSSSSSC-CCSCCCSSCCCHHHHC
T ss_pred CCCCccCCCCC---eEEEcCCCCc-ceECccCCCC-cCCCCCCceEChhhhC
Confidence 35799999975 7999999996 7999999973 3347789999999974
No 16
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.50 E-value=5e-08 Score=78.71 Aligned_cols=49 Identities=27% Similarity=0.639 Sum_probs=42.8
Q ss_pred ccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 4 VCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 4 VCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
.|.+||+.+.++.|++|+.|.. +.|.||++.. ...+|.+.|||..|...
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~-~yH~~Cl~pp-l~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDR-GYHMYCLNPP-VAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCC-EEETTTSSSC-CSSCCSSCCCCHHHHHH
T ss_pred ccCcccccCCCCceEEcCCCCc-cccccccCCC-ccCCCCCCeECccccch
Confidence 6999999999999999999997 6999999973 34578899999999754
No 17
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.50 E-value=1.3e-07 Score=75.82 Aligned_cols=47 Identities=26% Similarity=0.628 Sum_probs=40.1
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
..|.+||+.| .|+.|+.|.. +.|.||++.. ...+|.+.|+|..|...
T Consensus 26 ~~C~vC~~~g---~LL~CD~C~~-~fH~~Cl~Pp-L~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 26 TICRVCQKPG---DLVMCNQCEF-CFHLDCHLPA-LQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SCCSSSCSSS---CCEECTTSSC-EECTTSSSTT-CCCCCSSSCCCCSCCCC
T ss_pred CcCcCcCCCC---CEEECCCCCC-ceecccCCCC-CCCCcCCCcCCccccCC
Confidence 5799999987 5999999998 6999999873 34578899999999865
No 18
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.45 E-value=8.4e-08 Score=69.74 Aligned_cols=48 Identities=25% Similarity=0.710 Sum_probs=39.8
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
...|.+||+.| .|+.|+.|.. +.|.||++.. ...+|.+.|+|..|...
T Consensus 5 ~~~C~vC~~~g---~ll~Cd~C~~-~fH~~Cl~pp-l~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 5 EDFCSVCRKSG---QLLMCDTCSR-VYHLDCLDPP-LKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CSSCTTTCCCS---SCEECSSSSC-EECGGGSSSC-CSSCCCSCCCCHHHHHH
T ss_pred CCCCcCCCCCC---cEEEcCCCCc-CEECCcCCCC-cCCCCCCceEChhccCh
Confidence 35799999965 7999999996 7999999973 33577899999999754
No 19
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.44 E-value=8.4e-08 Score=70.55 Aligned_cols=47 Identities=30% Similarity=0.746 Sum_probs=39.6
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
..|.+|++.| .|+.|+.|.. +.|.||+++. ...+|.+.|+|..|..+
T Consensus 12 ~~C~vC~~~g---~ll~CD~C~~-~fH~~Cl~p~-l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 12 DYCEVCQQGG---EIILCDTCPR-AYHMVCLDPD-MEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SSCTTTSCCS---SEEECSSSSC-EEEHHHHCTT-CCSCCCSSCCCTTGGGG
T ss_pred CCCccCCCCC---cEEECCCCCh-hhhhhccCCC-CCCCCCCceECcccccc
Confidence 5799999854 7999999998 7999999984 33477899999999854
No 20
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.43 E-value=7.4e-08 Score=72.07 Aligned_cols=51 Identities=24% Similarity=0.774 Sum_probs=42.8
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
..|.+||...+.+.|+.|+.|.. ..|.+|+++.. ...+.+.|+|..|....
T Consensus 19 ~~C~~C~~~~~~~~mi~CD~C~~-wfH~~Cv~~~~-~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 19 WICPGCNKPDDGSPMIGCDDCDD-WYHWPCVGIMA-APPEEMQWFCPKCANKI 69 (75)
T ss_dssp ECBTTTTBCCSSCCEEECSSSSS-EEEHHHHTCSS-CCCSSSCCCCTTTHHHH
T ss_pred cCCCCCCCCCCCCCEEEcCCCCc-ccccccCCCCc-cCCCCCCEEChhccCch
Confidence 46999999999889999999996 69999999954 33455899999998653
No 21
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.41 E-value=1.3e-07 Score=80.30 Aligned_cols=48 Identities=27% Similarity=0.579 Sum_probs=40.3
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
..|.+||+.|. |+.|+.|.. +.|.||++.. ....|.+.|+|..|....
T Consensus 5 ~~C~~C~~~g~---ll~Cd~C~~-~~H~~C~~p~-l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 5 DWCAVCQNGGE---LLCCEKCPK-VFHLSCHVPT-LTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SSCTTTCCCSS---CEECSSSSC-EECTTTSSSC-CSSCCSSCCCCTTTSCSS
T ss_pred CccccCCCCCe---eeecCCCCc-ccCccccCCC-CCCCCCCCEECccccCcc
Confidence 47999998875 999999997 6999999873 345778999999998663
No 22
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.41 E-value=1.2e-07 Score=82.22 Aligned_cols=47 Identities=28% Similarity=0.562 Sum_probs=40.1
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
..|.+||+.|. |+.|+.|.. +.|.||++.. ....|.+.|+|..|...
T Consensus 8 ~~C~~C~~~g~---ll~Cd~C~~-~~H~~Cl~p~-l~~~p~~~W~C~~C~~~ 54 (207)
T 3u5n_A 8 DWCAVCQNGGD---LLCCEKCPK-VFHLTCHVPT-LLSFPSGDWICTFCRDI 54 (207)
T ss_dssp SSBTTTCCCEE---EEECSSSSC-EECTTTSSSC-CSSCCSSCCCCTTTSCS
T ss_pred CCCCCCCCCCc---eEEcCCCCC-ccCCccCCCC-CCCCCCCCEEeCceeCc
Confidence 57999999884 999999997 6999999873 34577899999999966
No 23
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.30 E-value=5e-07 Score=71.78 Aligned_cols=48 Identities=31% Similarity=0.648 Sum_probs=39.8
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
+-| +||..+....|+.|+.|.. ..|.+|+++.. . .++..|+|..|+..
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~-w~H~~C~~~~~-~-~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSV-WQHIDCMGIDR-Q-HIPDTYLCERCQPR 76 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCB-EEETTTTTCCT-T-SCCSSBCCTTTSSS
T ss_pred EEe-ECCCccCCCcEEEcCCCCC-cCcCcCCCCCc-c-CCCCCEECCCCcCC
Confidence 456 8999988999999999998 69999999953 2 34568999999754
No 24
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.30 E-value=3.3e-07 Score=79.55 Aligned_cols=48 Identities=25% Similarity=0.573 Sum_probs=40.1
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
..|.+||+.|. |+.|+.|.. +.|.||++.- ....|.+.|+|..|....
T Consensus 3 ~~C~~C~~~g~---ll~Cd~C~~-~~H~~Cl~p~-l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 3 TICRVCQKPGD---LVMCNQCEF-CFHLDCHLPA-LQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCBTTTCCCSS---CCCCTTTCC-BCCSTTSTTC-CSSCCCTTCCTTTTSCSC
T ss_pred CcCccCCCCCc---eeECCCCCc-hhccccCCCC-cccCCCCCCCCcCccCCC
Confidence 47999998874 999999998 6999999873 334778999999998763
No 25
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.09 E-value=2e-06 Score=68.13 Aligned_cols=49 Identities=22% Similarity=0.515 Sum_probs=41.6
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCcccccccc
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCE 52 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECq 52 (366)
..+|.+||+.|..+.|+.|+.|.. +.|.+|+++.. ...+.+.|+|.+|.
T Consensus 7 ~~~C~~C~~~g~~~~ll~C~~C~~-~~H~~Cl~~~~-~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 7 GANCAVCDSPGDLLDQFFCTTCGQ-HYHGMCLDIAV-TPLKRAGWQCPECK 55 (111)
T ss_dssp CSCBTTTCCCCCTTTSEECSSSCC-EECTTTTTCCC-CTTTSTTCCCTTTC
T ss_pred CCCCcCCCCCCCCcCCeECCCCCC-CcChHHhCCcc-ccccccCccCCcCC
Confidence 357999999999888999999998 69999999953 22456899999996
No 26
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.75 E-value=3.8e-05 Score=58.43 Aligned_cols=48 Identities=25% Similarity=0.759 Sum_probs=38.2
Q ss_pred cccccccccCcccceeecCC--CCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 3 TVCQQCGDKGFYEALIGCEK--CQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 3 tVCdICGDvGFEElLv~Cdk--CrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
..| +|+...+. .|+.|+. |....-|..|+++. ..+.+.|||..|....
T Consensus 17 ~~C-~C~~~~~g-~MI~CD~~~C~~~wfH~~Cvgl~---~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 17 TYC-LCHQVSYG-EMIGCDNPDCSIEWFHFACVGLT---TKPRGKWFCPRCSQES 66 (71)
T ss_dssp CCS-TTCCCSCS-SEECCSCSSCSCCCEETTTTTCS---SCCSSCCCCTTTSSCS
T ss_pred CEE-ECCCCCCC-CEeEeeCCCCCCccEecccCCcC---cCCCCCEECCCCCccc
Confidence 346 89998764 6999999 76446899999984 3567999999998664
No 27
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=97.68 E-value=2.2e-05 Score=64.27 Aligned_cols=46 Identities=33% Similarity=0.688 Sum_probs=38.4
Q ss_pred CcccccccccCcccceeecC--CCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 2 VTVCQQCGDKGFYEALIGCE--KCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~Cd--kCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
...|.+||+.| .|+.|+ .|.. +.|.+|+++. .+|.+.|+|.+|.-.
T Consensus 15 ~~~C~~C~~~G---~ll~CD~~~Cp~-~fH~~Cl~L~---~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 15 EDYCFQCGDGG---ELVMCDKKDCPK-AYHLLCLNLT---QPPYGKWECPWHQCD 62 (107)
T ss_dssp CSSCTTTCCCS---EEEECCSTTCCC-EECTGGGTCS---SCCSSCCCCGGGBCT
T ss_pred CCCCCcCCCCC---cEeEECCCCCCc-ccccccCcCC---cCCCCCEECCCCCCC
Confidence 35799999876 499999 8998 7999999963 467899999999754
No 28
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.65 E-value=1.7e-05 Score=58.31 Aligned_cols=47 Identities=21% Similarity=0.693 Sum_probs=36.4
Q ss_pred ccccccccCcccceeecCC--CCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 4 VCQQCGDKGFYEALIGCEK--CQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 4 VCdICGDvGFEElLv~Cdk--CrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
+..+|++..+ ..|+.|++ |....-|.+|+++. .+|.+.|+|..|..+
T Consensus 11 ~~C~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvgl~---~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 11 TYCLCHQVSY-GEMIGCDNPDCSIEWFHFACVGLT---TKPRGKWFCPRCSQE 59 (60)
T ss_dssp EETTTTEECC-SEEEECSCTTCSSCEEETGGGTCS---SCCSSCCCCHHHHC-
T ss_pred CEEECCCcCC-CCEEEeCCCCCCCceEehhcCCCC---cCCCCCEECcCccCc
Confidence 3449999876 46999999 55446899999974 356799999999754
No 29
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.63 E-value=4.7e-05 Score=61.02 Aligned_cols=48 Identities=25% Similarity=0.759 Sum_probs=37.9
Q ss_pred cccccccccCcccceeecCC--CCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 3 TVCQQCGDKGFYEALIGCEK--CQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 3 tVCdICGDvGFEElLv~Cdk--CrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
..| +|++..+. .|+.|++ |.....|..|+++. ..+.+.|||..|....
T Consensus 37 ~yC-iC~~~~~g-~MI~CD~~dC~~~WfH~~CVgl~---~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 37 TYC-LCHQVSYG-EMIGCDNPDCSIEWFHFACVGLT---TKPRGKWFCPRCSQES 86 (91)
T ss_dssp BCS-TTCCBCCS-CCCCCSCSSCSCCCCCSTTTTCS---SCCCSSCCCTTTCCCC
T ss_pred cEE-ECCCCCCC-CEeEecCCCCCCCCEecccCCcC---cCCCCCEECcCccCcC
Confidence 345 99998764 6999999 66446899999984 3567899999998653
No 30
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.59 E-value=2.2e-05 Score=57.76 Aligned_cols=46 Identities=22% Similarity=0.679 Sum_probs=36.4
Q ss_pred cccccccCcccceeecCC--CCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 5 CQQCGDKGFYEALIGCEK--CQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 5 CdICGDvGFEElLv~Cdk--CrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
..+|++..+. .|+.|++ |....-|..|+++. ..+.+.|+|..|..+
T Consensus 11 yC~C~~~~~g-~mi~CD~~~C~~~wfH~~Cvgl~---~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 11 YCLCHQVSYG-EMIGCDNPDCPIEWFHFACVDLT---TKPKGKWFCPRCVQE 58 (59)
T ss_dssp ETTTTEECCS-EEEECSCTTCSSCEEETGGGTCS---SCCSSCCCCHHHHCC
T ss_pred EEECCCCCCC-CeeEeeCCCCCCCCEecccCCcc---cCCCCCEECcCccCc
Confidence 3499998764 5999999 76446899999984 356799999999754
No 31
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.48 E-value=6.6e-05 Score=60.07 Aligned_cols=44 Identities=20% Similarity=0.639 Sum_probs=35.1
Q ss_pred ccccccccCcccceeecCCCC--CCCeeeccCCCCCCCCCCCCcccccc-cc
Q 017784 4 VCQQCGDKGFYEALIGCEKCQ--TTAVHIYCLPVLPASFEDDVLWYCED-CE 52 (366)
Q Consensus 4 VCdICGDvGFEElLv~CdkCr--vgAEHTYCLdv~pvefvppg~WfCEE-Cq 52 (366)
.| +|+...+. .|+.|+.|+ ....|..|+++. ..+.+.|||.. |.
T Consensus 28 yC-iC~~~~~g-~MI~CD~c~C~~eWfH~~CVgl~---~~p~~~W~Cp~cC~ 74 (90)
T 2jmi_A 28 YC-FCRNVSYG-PMVACDNPACPFEWFHYGCVGLK---QAPKGKWYCSKDCK 74 (90)
T ss_dssp CS-TTTCCCSS-SEECCCSSSCSCSCEETTTSSCS---SCTTSCCCSSHHHH
T ss_pred EE-EeCCCCCC-CEEEecCCCCccccCcCccCCCC---cCCCCCccCChhhc
Confidence 45 99987776 499999976 235899999984 25678999999 86
No 32
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.33 E-value=0.00015 Score=52.56 Aligned_cols=54 Identities=28% Similarity=0.541 Sum_probs=41.4
Q ss_pred CcccccccccCc-ccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCcC
Q 017784 2 VTVCQQCGDKGF-YEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKVA 56 (366)
Q Consensus 2 VtVCdICGDvGF-EElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~~ 56 (366)
...|.+|+.... .+.++.|+.|.. -.|.-|+++..........|+|..|..+.+
T Consensus 6 ~~~C~~C~~~~~~~~~mI~Cd~C~~-WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 6 SGQCGACGESYAADEFWICCDLCEM-WFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECSSSCC-EEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCCCCCCccCCCCCEEEccCCCC-CCCccccCcChhHhcCCCcEECCCCcCcCC
Confidence 357999998854 578999999996 589999999542222247999999987643
No 33
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.32 E-value=8.1e-05 Score=55.33 Aligned_cols=46 Identities=24% Similarity=0.782 Sum_probs=36.3
Q ss_pred cccccccCcccceeecCC--CCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 5 CQQCGDKGFYEALIGCEK--CQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 5 CdICGDvGFEElLv~Cdk--CrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
..+|++..+. .|+.|++ |....-|..|+++. ..+.+.|+|..|...
T Consensus 13 yC~C~~~~~g-~MI~CD~c~C~~~WfH~~Cvgl~---~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 13 YCLCNQVSYG-EMIGCDNEQCPIEWFHFSCVSLT---YKPKGKWYCPKCRGD 60 (62)
T ss_dssp ETTTTEECCS-EEEECSCTTCSSCEEETGGGTCS---SCCSSCCCCHHHHTC
T ss_pred EEECCCCCCC-CeeeeeCCCCCcccEecccCCcC---cCCCCCEECcCcccC
Confidence 3499997665 5999999 55346899999984 256799999999754
No 34
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.28 E-value=0.00016 Score=54.52 Aligned_cols=47 Identities=23% Similarity=0.596 Sum_probs=39.1
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEP 53 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqs 53 (366)
..| +||...+.+.++.|+.|+. -.|.-|+++.. . ..+..|+|..|..
T Consensus 20 ~~C-iC~~~~~~~~MIqCd~C~~-WfH~~Cvgi~~-~-~~~~~~~C~~C~~ 66 (68)
T 3o70_A 20 VTC-FCMKPFAGRPMIECNECHT-WIHLSCAKIRK-S-NVPEVFVCQKCRD 66 (68)
T ss_dssp CCS-TTCCCCTTCCEEECTTTCC-EEETTTTTCCT-T-SCCSSCCCHHHHT
T ss_pred eEe-ECCCcCCCCCEEECCCCCc-cccccccCcCc-c-cCCCcEECCCCCC
Confidence 446 9999988889999999997 58999999954 2 3457999999974
No 35
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.22 E-value=3.7e-05 Score=61.64 Aligned_cols=50 Identities=28% Similarity=0.674 Sum_probs=39.6
Q ss_pred Cccccccccc------CcccceeecCCCCCCCeeeccCCCCC--CCCCCCCcccccccc
Q 017784 2 VTVCQQCGDK------GFYEALIGCEKCQTTAVHIYCLPVLP--ASFEDDVLWYCEDCE 52 (366)
Q Consensus 2 VtVCdICGDv------GFEElLv~CdkCrvgAEHTYCLdv~p--vefvppg~WfCEECq 52 (366)
..+|.+|... |..+.|+.|+.|.. +.|.+|+++.+ ...++.+.|+|.+|.
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~-~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGN-SGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCC-EECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCC-CCCCchhcCCHHHHHHhhccccccccCC
Confidence 4689999766 67889999999998 69999998632 112456899999996
No 36
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.20 E-value=0.00014 Score=54.44 Aligned_cols=49 Identities=24% Similarity=0.530 Sum_probs=38.8
Q ss_pred cccccccccCc-ccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 3 TVCQQCGDKGF-YEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGF-EElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
..| +||...+ .+.++.|+.|.. -.|.-|+++.... ..+..|+|..|...
T Consensus 17 ~~C-~C~~~~~~g~~mI~Cd~C~~-W~H~~Cvg~~~~~-~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 17 VDC-KCGTKDDDGERMLACDGCGV-WHHTRCIGINNAD-ALPSKFLCFRCIEL 66 (72)
T ss_dssp ECC-TTCCCSCCSSCEEECSSSCE-EEETTTTTCCTTS-CCCSCCCCHHHHHH
T ss_pred eEe-eCCCccCCCCcEEECCCCCC-ccCCeeeccCccc-cCCCcEECCCccCC
Confidence 457 7999854 568999999987 5899999995422 34689999999865
No 37
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.04 E-value=0.00027 Score=53.77 Aligned_cols=52 Identities=25% Similarity=0.591 Sum_probs=40.4
Q ss_pred cccccccccCcccceeecC--CCCCCCeeeccCCCCCCCC----CCCCccccccccCCcC
Q 017784 3 TVCQQCGDKGFYEALIGCE--KCQTTAVHIYCLPVLPASF----EDDVLWYCEDCEPKVA 56 (366)
Q Consensus 3 tVCdICGDvGFEElLv~Cd--kCrvgAEHTYCLdv~pvef----vppg~WfCEECqse~~ 56 (366)
+.| +||.......++.|+ .|.. -+|.-|+++..... ..+..|+|..|.....
T Consensus 17 ~~C-iC~~~~~~g~MI~CD~~~C~~-W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T 1wew_A 17 VRC-VCGNSLETDSMIQCEDPRCHV-WQHVGCVILPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp CCC-SSCCCCCCSCEEECSSTTTCC-EEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred EEe-ECCCcCCCCCEEEECCccCCc-cccCEEEccccccccccccCCCCEECCCCCcccC
Confidence 345 899996667999999 9999 79999999953211 2357999999987643
No 38
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=96.89 E-value=0.00011 Score=61.46 Aligned_cols=50 Identities=26% Similarity=0.549 Sum_probs=39.3
Q ss_pred cccccccccCc-ccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 3 TVCQQCGDKGF-YEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGF-EElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
..| +||..+. ...++.|+.|.. -.|..|+++...+....+.|+|..|...
T Consensus 9 ~~C-~C~~~~~~~~~mi~Cd~C~~-WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 9 LYC-ICKTPEDESKFYIGCDRCQN-WYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp EET-TTTEECCTTSCEEECTTTCC-EEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred cEe-eCCCCCCCCCCEeECCCCCc-hhChhhcCCchhhccCccCeecCCCcch
Confidence 457 9999865 567999999997 5899999984322234679999999865
No 39
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.84 E-value=0.00048 Score=52.22 Aligned_cols=47 Identities=19% Similarity=0.560 Sum_probs=37.1
Q ss_pred ccccccccCcccceeecCCCC--CCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 4 VCQQCGDKGFYEALIGCEKCQ--TTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 4 VCdICGDvGFEElLv~CdkCr--vgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
+-++|+...+. .|+.|+.|+ ...-|..|+++.. .+.+.|+|..|...
T Consensus 7 ~yC~C~~~~~g-~MI~CD~cdC~~~WfH~~Cvgl~~---~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 7 GYCICNQVSYG-EMVGCDNQDCPIEWFHYGCVGLTE---APKGKWYCPQCTAA 55 (70)
T ss_dssp CCSTTSCCCCS-SEECCSCTTCSCCCEEHHHHTCSS---CCSSCCCCHHHHHH
T ss_pred eEEEcCCCCCC-CEeEeCCCCCCccCCcccccccCc---CCCCCEECCCCCcc
Confidence 33479988766 799999986 4468999999842 56789999999754
No 40
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=96.79 E-value=0.0004 Score=55.93 Aligned_cols=50 Identities=26% Similarity=0.584 Sum_probs=38.5
Q ss_pred Cccccccccc-------CcccceeecCCCCCCCeeeccCCCCCC--CCCCCCcccccccc
Q 017784 2 VTVCQQCGDK-------GFYEALIGCEKCQTTAVHIYCLPVLPA--SFEDDVLWYCEDCE 52 (366)
Q Consensus 2 VtVCdICGDv-------GFEElLv~CdkCrvgAEHTYCLdv~pv--efvppg~WfCEECq 52 (366)
+..|.+|... |..+.|+.|+.|.. +.|.+|+++.+. ..++.+.|+|.+|.
T Consensus 1 ~~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~-~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 1 GSYCDFCLGGSNMNKKSGRPEELVSCADCGR-SGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCCSSSCCBTTBCTTTCCCCCCEECSSSCC-EECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CCcCccCCCCccccccCCCCCCCeEeCCCCC-ccchhhCCChhhhhhccCCCccCccccC
Confidence 3579999765 45679999999998 699999998421 12456899999995
No 41
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=96.73 E-value=0.00076 Score=47.81 Aligned_cols=48 Identities=23% Similarity=0.499 Sum_probs=39.1
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEP 53 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqs 53 (366)
.+=.+||...+...++.|+.|+. -.|.-|+++.. + ..+..|+|..|..
T Consensus 4 ~~~C~C~~~~~~~~MI~Cd~C~~-W~H~~Cvgi~~-~-~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 4 LVTCFCMKPFAGRPMIECNECHT-WIHLSCAKIRK-S-NVPEVFVCQKCRD 51 (52)
T ss_dssp CBCSTTCCBCTTCCEEECTTTCC-EEETTTTTCCG-G-GCCSSCCCHHHHT
T ss_pred CeEEEeCCcCCCCCEEEcCCCCc-cccccccCCCc-c-cCCCcEECcCCCC
Confidence 34468999888889999999997 59999999954 2 3457999999964
No 42
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.56 E-value=0.00088 Score=50.83 Aligned_cols=51 Identities=25% Similarity=0.423 Sum_probs=39.2
Q ss_pred ccccccccCc-ccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 4 VCQQCGDKGF-YEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 4 VCdICGDvGF-EElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
+.++||...+ ...++.|+.|.. -.|.-|+++..........|+|..|....
T Consensus 13 ~~C~C~~~~d~~~~MIqCd~C~~-WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 13 VYCLCRQPYNVNHFMIECGLCQD-WFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCSTTSCSCCSSSCEEEBTTTCC-EEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred cEEEcCCccCCCCceEEcCCCCC-cEEeeecCcccccccCCCeEECCCccccc
Confidence 4459999865 678999999996 58999999954222224799999998763
No 43
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=96.32 E-value=0.00075 Score=50.89 Aligned_cols=52 Identities=23% Similarity=0.381 Sum_probs=39.4
Q ss_pred cccccccccCc-ccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 3 TVCQQCGDKGF-YEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 3 tVCdICGDvGF-EElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
.+-++||...+ ...++.|+.|+. -.|.-|+++..........|+|..|....
T Consensus 10 ~~yCiC~~~~~~~~~MI~Cd~C~~-WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 10 PVYCVCRLPYDVTRFMIECDACKD-WFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp CEETTTTEECCTTSCEEECTTTCC-EEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred eeEEECCCcCCCCCCEEEcCCCCC-CEecccccccccccCCCCEEECCCCcccC
Confidence 45679998755 578999999997 58999999954221223689999998653
No 44
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.22 E-value=0.0017 Score=48.20 Aligned_cols=50 Identities=28% Similarity=0.578 Sum_probs=37.4
Q ss_pred ccccccccCcccceeecC--CCCCCCeeeccCCCCCCCC---CCCCccccccccCC
Q 017784 4 VCQQCGDKGFYEALIGCE--KCQTTAVHIYCLPVLPASF---EDDVLWYCEDCEPK 54 (366)
Q Consensus 4 VCdICGDvGFEElLv~Cd--kCrvgAEHTYCLdv~pvef---vppg~WfCEECqse 54 (366)
|-++||.......++.|+ +|+. -+|..|+++..... ..+..|+|..|+..
T Consensus 11 v~C~C~~~~~~g~mI~CD~~~C~~-W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 11 VRCICSSTMVNDSMIQCEDQRCQV-WQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp ECCTTCCCSCCSCEEECSCTTTCE-EEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred EEeECCCCcCCCCEEEECCCCCCC-eEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 445899887777899999 5997 69999999843111 12347999999854
No 45
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.17 E-value=0.00076 Score=50.61 Aligned_cols=50 Identities=18% Similarity=0.396 Sum_probs=39.0
Q ss_pred ccccccccCcccceeecCCCCCCCeeeccCCCCCCCC----CCCCccccccccCC
Q 017784 4 VCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASF----EDDVLWYCEDCEPK 54 (366)
Q Consensus 4 VCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvef----vppg~WfCEECqse 54 (366)
+-++||...+.+.++.|+.|.. -.|..|+++..... ..+..|+|..|...
T Consensus 17 ~~C~C~~~~~~~~MI~Cd~C~~-WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 17 LYCICRQPHNNRFMICCDRCEE-WFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCSTTCCCCCSSCEEECSSSCC-EEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CEEECCCccCCCCEEEeCCCCC-cEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 4449999988889999999996 58999999943110 02479999999865
No 46
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=95.68 E-value=0.0031 Score=50.70 Aligned_cols=54 Identities=26% Similarity=0.546 Sum_probs=40.4
Q ss_pred CcccccccccC-cccceeecC-CCCCCCeeeccCCCCCCCC-----CCCCccccccccCCcC
Q 017784 2 VTVCQQCGDKG-FYEALIGCE-KCQTTAVHIYCLPVLPASF-----EDDVLWYCEDCEPKVA 56 (366)
Q Consensus 2 VtVCdICGDvG-FEElLv~Cd-kCrvgAEHTYCLdv~pvef-----vppg~WfCEECqse~~ 56 (366)
..+|.+|+..- ..+.++.|+ .|+. --|.-|.++....+ .+...|+|..|.....
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~-WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQK-WFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCC-EEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCccc-ccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 46899999983 345689998 9996 69999999942110 2458999999997643
No 47
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=95.65 E-value=0.0027 Score=54.40 Aligned_cols=48 Identities=29% Similarity=0.764 Sum_probs=37.7
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCC----C--CCCCccccccccCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPAS----F--EDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pve----f--vppg~WfCEECqse 54 (366)
--|.+||+.| .|+.|+.|-. +-|..|++..+.. . .+.+.|.|..|...
T Consensus 64 d~C~vC~~GG---~LlcCD~Cpr-~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 64 EQCRWCAEGG---NLICCDFCHN-AFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp CSCSSSCCCS---SEEECSSSCC-EEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CeecccCCCC---cEEeCCCCCC-eeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 3599999988 4899999997 6999999963310 0 36799999999854
No 48
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=95.51 E-value=0.0037 Score=44.33 Aligned_cols=47 Identities=21% Similarity=0.528 Sum_probs=36.0
Q ss_pred ccccccccCc-ccceeecC-CCCCCCeeeccCCCCCCCCCCCCcccccccc
Q 017784 4 VCQQCGDKGF-YEALIGCE-KCQTTAVHIYCLPVLPASFEDDVLWYCEDCE 52 (366)
Q Consensus 4 VCdICGDvGF-EElLv~Cd-kCrvgAEHTYCLdv~pvefvppg~WfCEECq 52 (366)
.|.+|+...+ .+.++.|+ .|.. -.|..|+++.... .....|+|..|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~-WfH~~Cvgl~~~~-~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDE-WFHQVCVGVSPEM-AENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCC-EEETTTTTCCHHH-HHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCc-cCcccccCCCccc-cCCCCEECCCCC
Confidence 5889998864 67899999 8996 4799999995311 123799999984
No 49
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=94.54 E-value=0.0052 Score=46.06 Aligned_cols=50 Identities=28% Similarity=0.658 Sum_probs=38.7
Q ss_pred Cccccccccc-CcccceeecC-CCCCCCeeeccCCCCCCCC-----CCCCcccccccc
Q 017784 2 VTVCQQCGDK-GFYEALIGCE-KCQTTAVHIYCLPVLPASF-----EDDVLWYCEDCE 52 (366)
Q Consensus 2 VtVCdICGDv-GFEElLv~Cd-kCrvgAEHTYCLdv~pvef-----vppg~WfCEECq 52 (366)
..+|.+|+.. +..+.++.|+ .|+. --|.-|.++....+ .+.+.|+|..|.
T Consensus 8 ~~~C~~C~~p~~~~~~mI~CD~~C~~-WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 8 VYPCGICTNEVNDDQDAILCEASCQK-WFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp -CBCTTTCSBCCTTSCEEEBTTTTCC-EEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCcCccCCCccCCCCCeEecccCccc-cCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 4689999997 4567889999 9997 59999999953111 245799999996
No 50
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=93.84 E-value=0.0099 Score=58.73 Aligned_cols=51 Identities=24% Similarity=0.371 Sum_probs=38.6
Q ss_pred cccccccccCc-ccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 3 TVCQQCGDKGF-YEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGF-EElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
.+.++||...+ ...++.|+.|+. -.|.-|+++..........|+|..|...
T Consensus 37 ~~yC~C~~~~d~~~~MIqCd~C~~-WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 37 PVYCVCRQPYDVNRFMIECDICKD-WFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CEETTTTEECCTTSCEEEBTTTCC-EEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CeEEeCCCcCCCCCCeEEccCCCC-ceeeeecCcCcccccCCCEEECCCCcCC
Confidence 34569998754 678999999997 5899999995422122368999999865
No 51
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=93.83 E-value=0.034 Score=43.86 Aligned_cols=42 Identities=29% Similarity=0.534 Sum_probs=31.0
Q ss_pred CcccceeecCCCCCCCeeeccCCCCCCC---CCCCCccccccccCC
Q 017784 12 GFYEALIGCEKCQTTAVHIYCLPVLPAS---FEDDVLWYCEDCEPK 54 (366)
Q Consensus 12 GFEElLv~CdkCrvgAEHTYCLdv~pve---fvppg~WfCEECqse 54 (366)
.+++.|+.|+.|.. ..|..|++++... .+.+..|+|..|.++
T Consensus 70 ~~~~~m~~C~~C~~-~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 70 DFEKKLMECCICNE-IVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp CGGGSCEEETTTCC-EECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred ccCcceEEeeecCC-eEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 55778999999998 6999999985321 123456999999876
No 52
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=93.79 E-value=0.0056 Score=60.20 Aligned_cols=54 Identities=28% Similarity=0.381 Sum_probs=41.1
Q ss_pred CcccccccccCc-ccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCcC
Q 017784 2 VTVCQQCGDKGF-YEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKVA 56 (366)
Q Consensus 2 VtVCdICGDvGF-EElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~~ 56 (366)
+.+.++||...+ ...++.|+.|+. -.|.-|+++..........|+|..|.....
T Consensus 4 ~~~yCiC~~~~d~~~~MIqCD~C~~-WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~ 58 (447)
T 3kv4_A 4 VPVYCLCRLPYDVTRFMIECDMCQD-WFHGSCVGVEEEKAADIDLYHCPNCEVLHG 58 (447)
T ss_dssp CCEETTTTEECCTTSCEEECTTTCC-EEEHHHHTCCHHHHTTEEECCCHHHHHHHC
T ss_pred CCeEEeCCCcCCCCCCeEEcCCCCc-ccccccCCcCcccccCCCEEECCCCccccC
Confidence 567889998854 688999999997 589999999532111237899999986643
No 53
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=93.35 E-value=0.028 Score=56.88 Aligned_cols=51 Identities=27% Similarity=0.645 Sum_probs=38.1
Q ss_pred cccccccccCccc-------------------------------ceeecCCCCCCCeeeccCCCCCCCCCCCCccccccc
Q 017784 3 TVCQQCGDKGFYE-------------------------------ALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDC 51 (366)
Q Consensus 3 tVCdICGDvGFEE-------------------------------lLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEEC 51 (366)
-.|..||..|.++ .++.|+.|+. -.|.-|.++..........|+|..|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~kk~~~~~n~~~~mI~CD~C~~-WfH~~CVgi~~~~a~~~~~y~Cp~C 91 (528)
T 3pur_A 13 DRCGGCGKFTHEDDLIALEEEKKKEKEKPLMSKKKSHHHKKNDFQWIGCDSCQT-WYHFLCSGLEQFEYYLYEKFFCPKC 91 (528)
T ss_dssp CCCTTTCCCC-------------------CCSCCCTTTTTTSTTSEEECTTTCC-EEEGGGTTCCGGGTTTEEECCCTTT
T ss_pred chhhcccCCCchhhHHHHHHHhhhhhhhccccccccccCCCcCCCEEECCCCCc-CCCCcCCCCChhHhcCCCeEECcCC
Confidence 4699999888774 5679999997 5999999995433233479999999
Q ss_pred cCC
Q 017784 52 EPK 54 (366)
Q Consensus 52 qse 54 (366)
...
T Consensus 92 ~~~ 94 (528)
T 3pur_A 92 VPH 94 (528)
T ss_dssp HHH
T ss_pred cCC
Confidence 865
No 54
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=93.34 E-value=0.0086 Score=50.72 Aligned_cols=48 Identities=29% Similarity=0.778 Sum_probs=37.3
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCC-----CC-CCCCccccccccCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPA-----SF-EDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pv-----ef-vppg~WfCEECqse 54 (366)
..|.+|||.|. |+.|+.|-. +-|..|+..... +. .+.+.|.|.-|...
T Consensus 58 ~~C~vC~dGG~---LlcCd~Cpr-~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 58 EQCRWCAEGGN---LICCDFCHN-AFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp SSCTTTCCCSE---EEECSSSSC-EEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CcCeecCCCCe---eEecCCCch-hhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 46999999875 889999997 799999986310 11 25789999999764
No 55
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=90.82 E-value=0.19 Score=44.11 Aligned_cols=51 Identities=22% Similarity=0.525 Sum_probs=37.2
Q ss_pred cccccccccCccc----ceeecCCCCCCCeeeccCCCCCCCC-----CC-CCccccccccCC
Q 017784 3 TVCQQCGDKGFYE----ALIGCEKCQTTAVHIYCLPVLPASF-----ED-DVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEE----lLv~CdkCrvgAEHTYCLdv~pvef-----vp-pg~WfCEECqse 54 (366)
..|.+|+..-.++ .++.|+.|++ -.|.-|.++..... .| ...|+|..|...
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~-W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~ 63 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDR-WVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 63 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCC-EEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCc-ccchhccccCHHHHHHhhcCCCCCeeECcCCCCC
Confidence 5699999874433 4999999998 59999999842100 01 147999999865
No 56
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=84.55 E-value=0.39 Score=39.27 Aligned_cols=59 Identities=20% Similarity=0.424 Sum_probs=40.0
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCC-----------CCCCCCCCccccccccCCcCCCCCCCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVL-----------PASFEDDVLWYCEDCEPKVAKPSTIVN 63 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~-----------pvefvppg~WfCEECqse~~ks~d~S~ 63 (366)
.-|.+|.-.. .+.|+.|.-|.+ .-|.=|++-+ ........-|.|.+|..=.-.-.+-+.
T Consensus 16 ~~C~VC~~~t-~~~l~pCRvC~R-vfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~lLLtEeE~ 85 (89)
T 1wil_A 16 EMCDVCEVWT-AESLFPCRVCTR-VFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNINLLLTEESG 85 (89)
T ss_dssp CCCTTTCCCC-SSCCSSCSSSSS-CCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCCSSSCCCCC
T ss_pred cccCcccccc-ccceeccccccc-cccHhhcccccccccHHHHHHHHccCCCCCccccccchhhhhcchhhc
Confidence 3599999776 567889999998 5999887652 011234579999999644333334333
No 57
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.81 E-value=1.7 Score=32.96 Aligned_cols=35 Identities=29% Similarity=0.671 Sum_probs=29.6
Q ss_pred Cccccccccc--CcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
.+.|+.|++. |+-..-+.|..|.. ..|.-|....+
T Consensus 28 pt~C~~C~~~lwGl~kqg~~C~~C~~-~~Hk~C~~~v~ 64 (83)
T 2yuu_A 28 PTFCSVCKDFVWGLNKQGYKCRQCNA-AIHKKCIDKII 64 (83)
T ss_dssp CCCCSSSCCCCCSSSCCEEEETTTCC-EECTTGGGTCC
T ss_pred CcChhhcChhhccccccccccCCcCC-eeChhhhhhCC
Confidence 4789999998 66778899999998 59999998743
No 58
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=81.02 E-value=1.3 Score=35.54 Aligned_cols=35 Identities=26% Similarity=0.616 Sum_probs=30.6
Q ss_pred ccceeecCCCCCCCeeeccCCCCCCCCCCCCcccccccc
Q 017784 14 YEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCE 52 (366)
Q Consensus 14 EElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECq 52 (366)
.-.|++|.-|...-.|..|+.+. ..+..|-|..|.
T Consensus 43 ~W~L~lC~~Cgs~gtH~~Cs~l~----~~~~~weC~~C~ 77 (85)
T 1weq_A 43 RWRLILCATCGSHGTHRDCSSLR----PNSKKWECNECL 77 (85)
T ss_dssp TTBCEECSSSCCCEECSGGGTCC----TTCSCCCCTTTS
T ss_pred CEEEEeCcccCCchhHHHHhCCc----CCCCCEECCcCc
Confidence 46799999999999999999983 346799999998
No 59
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=74.44 E-value=1.7 Score=33.18 Aligned_cols=37 Identities=24% Similarity=0.682 Sum_probs=27.9
Q ss_pred eeecCCCCCCCeeeccCCCCC------CCCCCCCccccccccCC
Q 017784 17 LIGCEKCQTTAVHIYCLPVLP------ASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 17 Lv~CdkCrvgAEHTYCLdv~p------vefvppg~WfCEECqse 54 (366)
++.|+.|.+. .|.=|.++.. ........|.|..|...
T Consensus 2 mi~c~~c~~w-~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~ 44 (140)
T 2ku7_A 2 MMQCGKCDRW-VHSKCENLSDEMYEILSNLPESVAYTCVNCTER 44 (140)
T ss_dssp CCCCSCCSSC-HHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTT
T ss_pred ccccccCCCc-cCCcccccCHHHHHHHhhccccceeeCcccccc
Confidence 6889999995 9999998842 11122468999999865
No 60
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=66.61 E-value=1.1 Score=36.94 Aligned_cols=50 Identities=18% Similarity=0.472 Sum_probs=39.0
Q ss_pred Cccccccccc----CcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCcC
Q 017784 2 VTVCQQCGDK----GFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKVA 56 (366)
Q Consensus 2 VtVCdICGDv----GFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~~ 56 (366)
..+|+||||. -+.++.+-|..|..+ .=.=|..+. ..++.-.|..|...-.
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FP-vCrpCyEYE----rkeG~q~CpqCktrYk 69 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFP-ACRPCYEYE----RREGTQNCPQCKTRYK 69 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCC-CCHHHHHHH----HHTSCSSCTTTCCCCC
T ss_pred CCccccccCccccCCCCCEEEeeeccCCh-hhHHHHHHH----HhccCccccccCCccc
Confidence 3599999997 557799999999985 556676662 3478899999987743
No 61
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=59.04 E-value=1.3 Score=34.80 Aligned_cols=37 Identities=16% Similarity=0.369 Sum_probs=27.9
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
.+|..|+... |..|.. ..|.||++. + .|.|.+|....
T Consensus 8 ~~C~~C~~~~-------C~~C~~-c~~~~~~~~-~-------~~~~~~c~~~~ 44 (117)
T 4bbq_A 8 RKCKACVQGE-------CGVCHY-CRDMKKFGG-P-------GRMKQSCVLRQ 44 (117)
T ss_dssp SCSHHHHSCC-------CSCSHH-HHHSGGGTS-C-------CCSCCCCGGGC
T ss_pred CcCcCcCCcC-------CCCCCC-CcCCcccCC-C-------Cccccchhhee
Confidence 5788888642 999997 488888765 2 59999997653
No 62
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=58.75 E-value=8.2 Score=31.39 Aligned_cols=43 Identities=16% Similarity=0.251 Sum_probs=32.4
Q ss_pred ccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 4 VCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 4 VCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
.|.+||.... +.|..|-. +.|..|++..+. ..+..-|+| |...
T Consensus 60 ~C~~C~k~~~----~~C~~Cp~-sfC~~c~~g~l~-~~~~~~~~c--~~~~ 102 (107)
T 4gne_A 60 QCDECSSAAV----SFCEFCPH-SFCKDHEKGALV-PSALEGRLC--CSEH 102 (107)
T ss_dssp BCTTTCSBCC----EECSSSSC-EECTTTCTTSCE-ECTTTTCEE--CTTS
T ss_pred CCCcCCCCCC----cCcCCCCc-chhhhccCCcce-ecCCCCcee--cCCC
Confidence 4778888765 89999997 688889888652 255689998 5544
No 63
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=58.72 E-value=5.2 Score=29.45 Aligned_cols=34 Identities=26% Similarity=0.681 Sum_probs=29.7
Q ss_pred ccccccccc-CcccceeecCCCCCCCeeeccCCCCC
Q 017784 3 TVCQQCGDK-GFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 3 tVCdICGDv-GFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
+.|++||+. +|...-+.|..|.. ..|.-|.+..+
T Consensus 20 ~~C~~Cg~~i~~gkq~~kC~dC~~-~cH~~C~~~~~ 54 (61)
T 4b6d_A 20 ESCVPCGKRIKFGKLSLKCRDCRV-VSHPECRDRCP 54 (61)
T ss_dssp EECTTTCCEECTTCEEEEESSSSC-EECGGGGGGSC
T ss_pred cccccccCEEEEeeEeeECCCCCC-eEchhHhhcCC
Confidence 579999987 78889999999998 59999988755
No 64
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=58.21 E-value=5 Score=27.07 Aligned_cols=35 Identities=31% Similarity=0.726 Sum_probs=29.4
Q ss_pred Cccccccccc--CcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
.+.|+.||+. |.-..-+.|..|+. ..|.-|....+
T Consensus 11 pt~C~~C~~~l~g~~~qg~~C~~C~~-~~H~~C~~~v~ 47 (50)
T 1ptq_A 11 PTFCDHCGSLLWGLVKQGLKCEDCGM-NVHHKCREKVA 47 (50)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCC-EECHHHHTTSC
T ss_pred CCCcCCCCceeeccCCccCEeCCCCC-eECHHHhhhcC
Confidence 4689999998 66678899999998 59999988744
No 65
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=56.36 E-value=5.3 Score=28.57 Aligned_cols=33 Identities=24% Similarity=0.685 Sum_probs=27.1
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
.++|+.||..=+-- +.|..|+. .-|.-|....|
T Consensus 14 ~t~C~~C~k~i~~G--~kC~~Ck~-~cH~kC~~~vp 46 (49)
T 1kbe_A 14 SQVCNVCQKSMIFG--VKCKHCRL-KCHNKCTKEAP 46 (49)
T ss_dssp SCCCSSSCCSSCCE--EEETTTTE-EESSSCTTTSC
T ss_pred CcCccccCceeECc--CCCCCCCC-ccchhhcCcCC
Confidence 37899999986633 78999998 49999999754
No 66
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=56.13 E-value=8.5 Score=27.74 Aligned_cols=35 Identities=29% Similarity=0.708 Sum_probs=29.7
Q ss_pred Cccccccccc--CcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
.+.|+.|++. |.-..-+.|..|.. ..|.-|....+
T Consensus 23 pt~C~~C~~~l~Gl~~qg~~C~~C~~-~~Hk~C~~~v~ 59 (65)
T 2enz_A 23 PTFCEHCGTLLWGLARQGLKCDACGM-NVHHRCQTKVA 59 (65)
T ss_dssp CCBCSSSCCBCCCSSSCSEEESSSCC-EECTTTTTTSC
T ss_pred CcCchhcChhheecCCcccccCCCCC-ccCHhHHhhCc
Confidence 4789999997 76778899999998 59999998754
No 67
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=54.83 E-value=8 Score=28.99 Aligned_cols=35 Identities=26% Similarity=0.640 Sum_probs=29.8
Q ss_pred Cccccccccc--CcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
.+.|+.|++. |.-..-+.|..|.. ..|.-|....+
T Consensus 34 pt~C~~C~~~lwGl~kqG~~C~~C~~-~~Hk~C~~~v~ 70 (77)
T 2enn_A 34 PTFCSVCHEFVWGLNKQGYQCRQCNA-AIHKKCIDKVI 70 (77)
T ss_dssp CEECSSSCCEECCTTCCEEECSSSCC-EEESGGGSSCC
T ss_pred CcCccccChhhccccccccCcCCCCC-cCCHhHHhhCc
Confidence 4789999997 76788899999998 59999998743
No 68
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=54.17 E-value=5.6 Score=28.63 Aligned_cols=35 Identities=31% Similarity=0.726 Sum_probs=30.0
Q ss_pred Cccccccccc--CcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
.+.|+.|++. |....-+.|..|+. ..|.-|....+
T Consensus 20 pt~C~~C~~~l~Gl~~qg~~C~~C~~-~~Hk~C~~~v~ 56 (65)
T 3uej_A 20 PTFCDHCGSLLWGLVKQGLKCEDCGM-NVHHKCREKVA 56 (65)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCC-EECHHHHTTSC
T ss_pred CCcccccChhhhccCceeeECCCCCC-eEchhHhhhCC
Confidence 4679999997 77888899999998 59999988754
No 69
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.49 E-value=13 Score=28.23 Aligned_cols=35 Identities=31% Similarity=0.812 Sum_probs=29.6
Q ss_pred Cccccccccc--CcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
.+.|+.|++. |.-..-+.|..|.. ..|.-|....+
T Consensus 28 pt~C~~C~~~l~Gl~kqG~~C~~C~~-~~Hk~C~~~v~ 64 (85)
T 2eli_A 28 PTFCDHCGSLLYGLIHQGMKCDTCDM-NVHKQCVINVP 64 (85)
T ss_dssp CCBCSSSCCBCCCSSSCEEECSSSCC-EEETTTTTTSC
T ss_pred CcCCcccCccccccccCCCcCCCcCC-ccCHhHHhhcC
Confidence 4689999997 66678899999998 59999998843
No 70
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=49.03 E-value=10 Score=25.73 Aligned_cols=33 Identities=21% Similarity=0.541 Sum_probs=28.0
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
.+.|+.||+.-+ .-+.|..|+. ..|.-|.+..+
T Consensus 14 pt~C~~C~~~l~--qG~~C~~C~~-~~H~~C~~~v~ 46 (52)
T 1faq_A 14 LAFCDICQKFLL--NGFRCQTCGY-KFHEHCSTKVP 46 (52)
T ss_dssp CEECTTSSSEEC--SEEECTTTTC-CBCSTTSSSSS
T ss_pred CcCCCCcccccc--cCCEeCCCCC-eEChhHHhhCc
Confidence 367999999877 7889999998 59999998854
No 71
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=48.73 E-value=7.8 Score=30.13 Aligned_cols=32 Identities=22% Similarity=0.563 Sum_probs=27.0
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVL 36 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~ 36 (366)
-.|+.|+..+. .....|..|+.. -|..|....
T Consensus 48 ~~C~~C~~~~~-~~~Y~C~~C~f~-lH~~Ca~~p 79 (89)
T 1v5n_A 48 YTCDKCEEEGT-IWSYHCDECDFD-LHAKCALNE 79 (89)
T ss_dssp CCCTTTSCCCC-SCEEECTTTCCC-CCHHHHHCS
T ss_pred eEeCCCCCcCC-CcEEEcCCCCCe-EcHHhcCCC
Confidence 36999999974 678999999984 999998773
No 72
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=47.55 E-value=12 Score=26.83 Aligned_cols=27 Identities=33% Similarity=0.746 Sum_probs=21.1
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPV 35 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv 35 (366)
...|..||. ..+..|.+|+. +.||...
T Consensus 13 ~~~C~~C~~----~~~~~Cs~C~~---v~YCs~~ 39 (60)
T 2od1_A 13 SESCWNCGR----KASETCSGCNT---ARYCGSF 39 (60)
T ss_dssp SSCCTTTSS----CCCEECTTTSC---CEESSHH
T ss_pred CCccccCCC----cccccCCCCCC---eeecCHH
Confidence 457999998 35899999986 5799755
No 73
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.94 E-value=11 Score=28.65 Aligned_cols=48 Identities=21% Similarity=0.482 Sum_probs=36.4
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCc
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKV 55 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~ 55 (366)
+..|.||-+.-... ..|..|.. +-|.+|+...+. ....-.|.-|+..-
T Consensus 15 i~~C~IC~~~i~~g--~~C~~C~h-~fH~~Ci~kWl~---~~~~~~CP~Cr~~w 62 (74)
T 2ct0_A 15 VKICNICHSLLIQG--QSCETCGI-RMHLPCVAKYFQ---SNAEPRCPHCNDYW 62 (74)
T ss_dssp SCBCSSSCCBCSSS--EECSSSCC-EECHHHHHHHST---TCSSCCCTTTCSCC
T ss_pred CCcCcchhhHcccC--CccCCCCc-hhhHHHHHHHHH---hcCCCCCCCCcCcC
Confidence 57899999987754 47889998 599999987542 22336799998773
No 74
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=46.59 E-value=13 Score=26.59 Aligned_cols=26 Identities=35% Similarity=0.787 Sum_probs=20.4
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPV 35 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv 35 (366)
..|..||. ..+..|.+|+. +.||...
T Consensus 16 ~~C~~C~~----~~~~~Cs~C~~---v~YCs~~ 41 (60)
T 2dj8_A 16 ESCWNCGR----KASETCSGCNT---ARYCGSF 41 (60)
T ss_dssp CCCSSSCS----CCCEECTTTSC---CEESSHH
T ss_pred cccccCCC----CCcccCCCCCC---EeeeCHH
Confidence 57999987 35899999986 5788754
No 75
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=45.89 E-value=6.1 Score=35.44 Aligned_cols=47 Identities=21% Similarity=0.511 Sum_probs=36.4
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
+..|.+|-+.-... ..|..|+. +-|.+|+..+.. .-+.-.|.-|...
T Consensus 180 i~~C~iC~~iv~~g--~~C~~C~~-~~H~~C~~~~~~---~~~~~~CP~C~~~ 226 (238)
T 3nw0_A 180 VKICNICHSLLIQG--QSCETCGI-RMHLPCVAKYFQ---SNAEPRCPHCNDY 226 (238)
T ss_dssp CCBCTTTCSBCSSC--EECSSSCC-EECHHHHHHHTT---TCSSCBCTTTCCB
T ss_pred CCcCcchhhHHhCC--cccCccCh-HHHHHHHHHHHH---hCCCCCCCCCCCC
Confidence 57899999997754 88999998 599999988532 2235579889765
No 76
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=45.32 E-value=11 Score=25.70 Aligned_cols=27 Identities=30% Similarity=0.803 Sum_probs=19.9
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPV 35 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv 35 (366)
...|..||.. .+..|.+|+. +.||...
T Consensus 9 ~~~C~~C~~~----~~~~C~~C~~---~~YCs~~ 35 (52)
T 2jw6_A 9 EQSCVNCGRE----AMSECTGCHK---VNYCSTF 35 (52)
T ss_dssp --CCSSSSSS----CSEECTTTCS---SEESSHH
T ss_pred CCcCCCCCCC----CcCcCCCCCC---EeecCHH
Confidence 3579999874 6899999986 5788754
No 77
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=41.38 E-value=12 Score=29.80 Aligned_cols=41 Identities=22% Similarity=0.491 Sum_probs=26.9
Q ss_pred CCccccccccc-CcccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCCcC
Q 017784 1 MVTVCQQCGDK-GFYEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPKVA 56 (366)
Q Consensus 1 mVtVCdICGDv-GFEElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse~~ 56 (366)
|...|+.|+.. ........|..|+.- + . ... ||.+|..+.+
T Consensus 1 M~~~CP~C~~~l~~~~~~~~C~~C~~~--------~-----~-~~a-fCPeCgq~Le 42 (81)
T 2jrp_A 1 MEITCPVCHHALERNGDTAHCETCAKD--------F-----S-LQA-LCPDCRQPLQ 42 (81)
T ss_dssp CCCCCSSSCSCCEECSSEEECTTTCCE--------E-----E-EEE-ECSSSCSCCC
T ss_pred CCCCCCCCCCccccCCCceECcccccc--------C-----C-Ccc-cCcchhhHHH
Confidence 67889999954 333446779998872 1 1 223 8888876643
No 78
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=39.84 E-value=7 Score=28.33 Aligned_cols=35 Identities=26% Similarity=0.577 Sum_probs=28.7
Q ss_pred Cccccccccc--CcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
.+.|+.|++. |.-..-+.|..|.. ..|.-|....+
T Consensus 24 pt~C~~C~~~l~Gl~~qg~~C~~C~~-~~Hk~C~~~v~ 60 (66)
T 1y8f_A 24 PTYCYECEGLLWGIARQGMRCTECGV-KCHEKCQDLLN 60 (66)
T ss_dssp CCCCTTTCCCCCSSCCEEEEETTTCC-EECTTHHHHSC
T ss_pred CcChhhcChhhcccCcceeEcCCCCC-eeCHHHHhhCc
Confidence 4789999998 55677889999998 59999987743
No 79
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=38.82 E-value=2.3 Score=30.78 Aligned_cols=49 Identities=27% Similarity=0.427 Sum_probs=35.7
Q ss_pred CcccccccccCcccceeecCCCCC--CCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQT--TAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrv--gAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
...|-||-+.+.++++.-| +|.. ...|..|+..-. ...+.+.|+-|...
T Consensus 6 ~~~CrIC~~~~~~~l~~PC-~C~gs~~~~H~~Cl~~W~---~~~~~~~C~~C~~~ 56 (60)
T 1vyx_A 6 VPVCWICNEELGNERFRAC-GCTGELENVHRSCLSTWL---TISRNTACQICGVV 56 (60)
T ss_dssp CCEETTTTEECSCCCCCSC-CCSSGGGSCCHHHHHHHH---HHHTCSBCTTTCCB
T ss_pred CCEeEEeecCCCCceecCc-CCCCchhhhHHHHHHHHH---HhCCCCccCCCCCe
Confidence 3579999777777777777 4764 258999998853 22457899999865
No 80
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.53 E-value=35 Score=24.64 Aligned_cols=10 Identities=20% Similarity=0.521 Sum_probs=6.2
Q ss_pred CCcccccccc
Q 017784 43 DVLWYCEDCE 52 (366)
Q Consensus 43 pg~WfCEECq 52 (366)
...+.|+.|.
T Consensus 78 ~~~~~C~~C~ 87 (115)
T 2dmi_A 78 QKVLKCMYCG 87 (115)
T ss_dssp CSSCBCSSSC
T ss_pred CcceECCCCC
Confidence 3456777775
No 81
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=38.15 E-value=20 Score=25.57 Aligned_cols=26 Identities=38% Similarity=0.813 Sum_probs=20.5
Q ss_pred cccccccccCcccceeecCCCCCCCeeeccCCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPV 35 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv 35 (366)
..|..||.. .+..|.+|+. +.||...
T Consensus 18 ~~C~~C~~~----~~~~Cs~C~~---~~YCs~~ 43 (64)
T 2odd_A 18 ESCWNCGRK----ASETCSGCNT---ARYCGSF 43 (64)
T ss_dssp SSCTTTSSC----CCEEETTTSC---CEESSHH
T ss_pred CcCccccCC----CcccCCCCCC---hhhCCHH
Confidence 579999883 5899999986 5799754
No 82
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.79 E-value=6.9 Score=29.12 Aligned_cols=35 Identities=20% Similarity=0.481 Sum_probs=29.1
Q ss_pred Cccccccccc--CcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
-+.|+.|++. |.-..-+.|..|+. ..|.-|....+
T Consensus 28 pt~C~~C~~~lwGl~kqG~~C~~C~~-~~Hk~C~~~v~ 64 (74)
T 2db6_A 28 PKFCDVCARMIVLNNKFGLRCKNCKT-NIHEHCQSYVE 64 (74)
T ss_dssp CEECSSSCCEECHHHHEEEEESSSCC-EECTTTTGGGS
T ss_pred CcCchhcChhhccccCCccccCCCCC-ccChhHHhhCC
Confidence 3679999998 65678899999998 59999998754
No 83
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=32.97 E-value=20 Score=26.48 Aligned_cols=44 Identities=23% Similarity=0.595 Sum_probs=31.1
Q ss_pred cccCcccceeecCC--CCCCCeeeccCCCCCCCCCC-CCccccccccCCcCCCC
Q 017784 9 GDKGFYEALIGCEK--CQTTAVHIYCLPVLPASFED-DVLWYCEDCEPKVAKPS 59 (366)
Q Consensus 9 GDvGFEElLv~Cdk--CrvgAEHTYCLdv~pvefvp-pg~WfCEECqse~~ks~ 59 (366)
|..|.+.-.+.|.+ |+.+ .--||. ++. ...|.|.-|...+..+.
T Consensus 1 ~~~~~~~~pvRC~r~~Cray-lNP~~~------~~~~~~~W~C~~C~~~N~~P~ 47 (59)
T 2yrc_A 1 GSSGSSGEPVLCSRTTCRAV-LNPLCQ------VDYRAKLWACNFCYQRNQFPP 47 (59)
T ss_dssp CCCSSCCCCCBCSCTTTCCB-CCTTSE------EEGGGTEEECSSSCCEEECCS
T ss_pred CCccCCCCCcccCCCCCCeE-ECCceE------EECCCCEEEcccCCCcCCCCH
Confidence 56788889999999 9985 333332 232 35899999987765544
No 84
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=28.46 E-value=30 Score=25.75 Aligned_cols=27 Identities=30% Similarity=0.715 Sum_probs=20.1
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPV 35 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv 35 (366)
...|..||.. .+..|.+|+.. .||...
T Consensus 15 ~~~C~~C~~~----~~~~Cs~Ck~v---~YCs~e 41 (70)
T 2d8q_A 15 RPRCAYCSAE----ASKRCSRCQNE---WYCCRE 41 (70)
T ss_dssp CCBCSSSCCB----CCCBCTTTSCC---BCSCHH
T ss_pred CCcCCCCCCc----ccccCCCCCCE---eeCCHH
Confidence 3578899874 57889999863 688765
No 85
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=27.47 E-value=8.3 Score=37.75 Aligned_cols=45 Identities=27% Similarity=0.689 Sum_probs=29.8
Q ss_pred cccccccccCcccceeecC--CCCCCCeeeccCC---CCCCC-----CCCCCccccccccCC
Q 017784 3 TVCQQCGDKGFYEALIGCE--KCQTTAVHIYCLP---VLPAS-----FEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEElLv~Cd--kCrvgAEHTYCLd---v~pve-----fvppg~WfCEECqse 54 (366)
.-|.+||+.| .|+.|+ .|-. .||.. ..... ......|.|.-|.+.
T Consensus 94 ~yCr~C~~Gg---~l~~Cdn~~C~r----~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 94 SYCSICCSGE---TLLICGNPDCTR----CYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp CSCTTTCCCS---SCEECCSTTCCC----EECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred ccceEcCCCC---eEEEeCCCCCCc----chHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 3599999877 599999 7764 46632 21100 022368999999966
No 86
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=26.97 E-value=21 Score=29.74 Aligned_cols=25 Identities=24% Similarity=0.496 Sum_probs=17.5
Q ss_pred CCccccccccc-CcccceeecCCCCC
Q 017784 1 MVTVCQQCGDK-GFYEALIGCEKCQT 25 (366)
Q Consensus 1 mVtVCdICGDv-GFEElLv~CdkCrv 25 (366)
|...|+.|+.. ....--++|..|+.
T Consensus 31 M~~~CP~Cq~eL~~~g~~~hC~~C~~ 56 (101)
T 2jne_A 31 MELHCPQCQHVLDQDNGHARCRSCGE 56 (101)
T ss_dssp CCCBCSSSCSBEEEETTEEEETTTCC
T ss_pred ccccCccCCCcceecCCEEECccccc
Confidence 56788899854 44445667888876
No 87
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=26.44 E-value=40 Score=33.25 Aligned_cols=34 Identities=32% Similarity=0.844 Sum_probs=29.0
Q ss_pred ccccccccc--CcccceeecCCCCCCCeeeccCCCCC
Q 017784 3 TVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 3 tVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
+.|++||.. |....-+.|.-|+.. .|.-|+...+
T Consensus 114 ~~C~~C~~~l~g~~~qg~~C~~C~~~-~H~~C~~~v~ 149 (674)
T 3pfq_A 114 TFCDHCGSLLYGLIHQGMKCDTCMMN-VHKRCVMNVP 149 (674)
T ss_dssp CCCSSSCSCCBBSSSCEECCSSSCCC-BCSSTTSSSC
T ss_pred CCCCccccccchhhcCccccccCCcc-hhhhhhhccC
Confidence 579999997 777788999999985 9999997744
No 88
>2bpt_B Nucleoporin NUP1; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae}
Probab=26.04 E-value=15 Score=25.84 Aligned_cols=15 Identities=47% Similarity=0.871 Sum_probs=5.2
Q ss_pred CCcceeccCCCCCCc
Q 017784 310 LSPIRWSGLNGGSST 324 (366)
Q Consensus 310 ~~~~~~~~~~~~~~~ 324 (366)
..-|.+||||||-..
T Consensus 9 vpninfsglnggitn 23 (39)
T 2bpt_B 9 VPNINFSGLNGGITN 23 (39)
T ss_dssp SCCCCCC--------
T ss_pred cCccccccccccccc
Confidence 345899999999753
No 89
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.45 E-value=16 Score=23.96 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=18.7
Q ss_pred ccceeecCCCCCCCeeeccCCCCCCCCCCCCccccccccCC
Q 017784 14 YEALIGCEKCQTTAVHIYCLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 14 EElLv~CdkCrvgAEHTYCLdv~pvefvppg~WfCEECqse 54 (366)
.+..+.|..|...+....=+.. ...+.|+.|...
T Consensus 15 ~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~ 48 (73)
T 2ctu_A 15 GDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKD 48 (73)
T ss_dssp CCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHT
T ss_pred CCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChh
Confidence 3456777777765443322222 345778877533
No 90
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=23.35 E-value=26 Score=24.36 Aligned_cols=25 Identities=24% Similarity=0.712 Sum_probs=16.4
Q ss_pred eccCCCCCCC-CCCCCccccccccCC
Q 017784 30 IYCLPVLPAS-FEDDVLWYCEDCEPK 54 (366)
Q Consensus 30 TYCLdv~pve-fvppg~WfCEECqse 54 (366)
+||..+--.- -.-+++|.|..|.++
T Consensus 2 tycielgercpnpregdwcchkcvpe 27 (36)
T 4b2u_A 2 TYCIELGERCPNPREGDWCCHKCVPE 27 (36)
T ss_dssp CSSCCTTSBCCCGGGCCSSSSEEEEE
T ss_pred ceeeeccccCcCCCccCeeeeccccc
Confidence 6888773111 122589999999865
No 91
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=22.77 E-value=22 Score=31.15 Aligned_cols=45 Identities=22% Similarity=0.636 Sum_probs=30.6
Q ss_pred cccccccccCcccceeecC--CCCCCCeeeccCC---CCCC-----CCCCCCccccccccCC
Q 017784 3 TVCQQCGDKGFYEALIGCE--KCQTTAVHIYCLP---VLPA-----SFEDDVLWYCEDCEPK 54 (366)
Q Consensus 3 tVCdICGDvGFEElLv~Cd--kCrvgAEHTYCLd---v~pv-----efvppg~WfCEECqse 54 (366)
.-|.+||+.| .|+.|+ .|-. .||.. .... +......|.|.-|.+.
T Consensus 80 ~yC~wC~~Gg---~l~~Cdn~~C~r----~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~ 134 (159)
T 3a1b_A 80 SYCTICCGGR---EVLMCGNNNCCR----CFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHK 134 (159)
T ss_dssp SSCTTTSCCS---EEEECSSTTTCC----EEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSS
T ss_pred ceeeEecCCC---eEEeeCCCCCCC----chhHHHHHHhcCHhHHHHHhccCCCEEEecCCc
Confidence 3589999876 789999 6876 46642 2110 0134579999999965
No 92
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=22.32 E-value=53 Score=24.43 Aligned_cols=21 Identities=29% Similarity=0.725 Sum_probs=11.0
Q ss_pred cccccccccCcccceeecCCC
Q 017784 3 TVCQQCGDKGFYEALIGCEKC 23 (366)
Q Consensus 3 tVCdICGDvGFEElLv~CdkC 23 (366)
..|++|.+.-+.+...+|-.|
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C 24 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTC 24 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTT
T ss_pred CCCcCCCCCCCCCceEECCcC
Confidence 346666544344555555555
No 93
>3dzy_D Peroxisome proliferator-activated receptor gamma; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_D* 3e00_D* 2env_A
Probab=21.66 E-value=16 Score=34.67 Aligned_cols=51 Identities=29% Similarity=0.597 Sum_probs=29.5
Q ss_pred Cccccccccc--CcccceeecCCCCC------CCeeec--cCCCCCCCCCCCCccccccccCC
Q 017784 2 VTVCQQCGDK--GFYEALIGCEKCQT------TAVHIY--CLPVLPASFEDDVLWYCEDCEPK 54 (366)
Q Consensus 2 VtVCdICGDv--GFEElLv~CdkCrv------gAEHTY--CLdv~pvefvppg~WfCEECqse 54 (366)
...|.||||. |+--=...|..|.. ...-.| |.+--. ........|..|+-+
T Consensus 50 ~~~C~vC~~~~~g~hygv~~C~~C~~FFrR~~~~~~~~~~c~~~C~--~~~~~r~~C~~CR~~ 110 (419)
T 3dzy_D 50 AIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCR--IHKKSRNKCQYCRFQ 110 (419)
T ss_dssp CCCCSSSCSCCCSBCSSSBCCHHHHHHHHHHHTTTCCCCCCCSCCC--CCTTGGGTCHHHHHH
T ss_pred CCcCeECCCcCCCCccCcccchhhhHHHccchhcccccccccCCCC--cccccCccchhhhHH
Confidence 4579999998 44444567888872 111223 433322 133456788888644
No 94
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=21.44 E-value=30 Score=34.11 Aligned_cols=33 Identities=33% Similarity=0.718 Sum_probs=0.0
Q ss_pred ccccccccc--CcccceeecCCCCCCCeeeccCCCC
Q 017784 3 TVCQQCGDK--GFYEALIGCEKCQTTAVHIYCLPVL 36 (366)
Q Consensus 3 tVCdICGDv--GFEElLv~CdkCrvgAEHTYCLdv~ 36 (366)
+-|++||+. |.-..=+.|..|.. ..|.=|....
T Consensus 49 ~~C~~C~~~i~g~~~qg~~C~~C~~-~~H~~C~~~v 83 (674)
T 3pfq_A 49 TFCSHCTDFIWGFGKQGFQCQVCSF-VVHKRCHEFV 83 (674)
T ss_dssp ------------------------------------
T ss_pred CccccccccccccCCceeECCCCCC-CcChhhcCcC
Confidence 569999997 77788899999998 5999898764
No 95
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=20.94 E-value=44 Score=24.94 Aligned_cols=34 Identities=21% Similarity=0.600 Sum_probs=27.4
Q ss_pred CcccccccccCcccceeecCCCCCCCeeeccCCCCC
Q 017784 2 VTVCQQCGDKGFYEALIGCEKCQTTAVHIYCLPVLP 37 (366)
Q Consensus 2 VtVCdICGDvGFEElLv~CdkCrvgAEHTYCLdv~p 37 (366)
.+.|+.||+.= -..-+.|..|+. ..|.-|....+
T Consensus 35 pt~C~~C~~~l-~~qG~kC~~C~~-~cHkkC~~~V~ 68 (72)
T 2fnf_X 35 PGWCDLCGREV-LRQALRCANCKF-TCHSECRSLIQ 68 (72)
T ss_dssp CCBCTTTSSBC-SSCCEECTTSSC-EECTGGGGGCC
T ss_pred CcchhhhhHHH-HhCcCccCCCCC-eechhhhccCc
Confidence 36799999976 556678999998 59999988743
No 96
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=20.05 E-value=73 Score=28.24 Aligned_cols=45 Identities=13% Similarity=0.170 Sum_probs=30.2
Q ss_pred cccccCc-ccceeecCCCCCCCeeeccCCCCCCCCCCCC----ccccccccC
Q 017784 7 QCGDKGF-YEALIGCEKCQTTAVHIYCLPVLPASFEDDV----LWYCEDCEP 53 (366)
Q Consensus 7 ICGDvGF-EElLv~CdkCrvgAEHTYCLdv~pvefvppg----~WfCEECqs 53 (366)
-||..|. ..++++|.+|+. --|.=|+....... .++ ...|..|..
T Consensus 9 YCG~~~~~~~~mLqC~~C~q-WFH~~Cl~~~~~~~-lp~~~fY~F~C~~C~~ 58 (177)
T 3rsn_A 9 DEENGRQLGEVELQCGICTK-WFTADTFGIDTSSC-LPFMTNYSFHCNVCHH 58 (177)
T ss_dssp --CTTCCTTSCEEECTTTCC-EEEGGGGTCCCTTC-CTTCCSEEEECTTTST
T ss_pred EcCCCCCCCceeEeeccccc-eecHHHhcccccCc-cccceeEEEEccccCC
Confidence 4777654 667899999998 59999998533221 232 345999964
Done!